Query 009748
Match_columns 527
No_of_seqs 263 out of 2006
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 12:07:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009748.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009748hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 5.2E-65 1.8E-69 544.4 30.4 355 106-482 24-415 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 2.7E-61 9.3E-66 513.2 32.2 343 107-514 18-365 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 3.5E-60 1.2E-64 498.3 31.2 330 109-496 14-374 (376)
4 2uvf_A Exopolygalacturonase; G 100.0 8.2E-57 2.8E-61 498.5 32.5 359 106-481 153-565 (608)
5 1czf_A Polygalacturonase II; b 100.0 1.6E-56 5.4E-61 467.6 29.7 322 107-496 27-358 (362)
6 1nhc_A Polygalacturonase I; be 100.0 3.9E-56 1.3E-60 460.8 29.2 318 123-496 5-332 (336)
7 2iq7_A Endopolygalacturonase; 100.0 3.6E-56 1.2E-60 461.6 28.9 318 124-496 6-333 (339)
8 1hg8_A Endopolygalacturonase; 100.0 1.3E-55 4.6E-60 458.8 31.1 319 125-496 7-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 3.2E-55 1.1E-59 454.3 29.1 314 126-496 12-335 (339)
10 1k5c_A Endopolygalacturonase; 100.0 5.5E-55 1.9E-59 451.5 23.8 298 126-481 8-318 (335)
11 2x6w_A Tail spike protein; vir 100.0 3.8E-49 1.3E-53 426.2 19.9 293 107-480 49-384 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 3.1E-41 1E-45 368.5 17.1 306 109-481 142-522 (549)
13 1ogo_X Dextranase; hydrolase, 100.0 7.9E-39 2.7E-43 349.6 18.9 272 139-481 229-547 (574)
14 1h80_A IOTA-carrageenase; hydr 100.0 7.8E-38 2.7E-42 334.6 23.7 295 106-477 18-358 (464)
15 3gq8_A Preneck appendage prote 100.0 2.1E-37 7.2E-42 336.3 23.0 236 108-415 21-275 (609)
16 3gqn_A Preneck appendage prote 100.0 5.4E-37 1.8E-41 337.7 21.7 236 108-415 21-275 (772)
17 2vbk_A Tailspike-protein; vira 100.0 4.6E-31 1.6E-35 272.4 13.1 212 107-387 49-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 4E-29 1.4E-33 261.4 23.5 300 109-481 2-361 (377)
19 3jur_A EXO-poly-alpha-D-galact 99.9 4.6E-24 1.6E-28 228.1 19.5 200 264-481 215-445 (448)
20 2uvf_A Exopolygalacturonase; G 99.9 1.2E-21 4E-26 217.1 21.6 221 264-504 356-606 (608)
21 3eqn_A Glucan 1,3-beta-glucosi 99.9 1.5E-21 5.2E-26 215.3 20.6 262 106-449 46-326 (758)
22 1bhe_A PEHA, polygalacturonase 99.8 1.7E-18 5.7E-23 181.5 23.1 169 264-452 176-363 (376)
23 2iq7_A Endopolygalacturonase; 99.8 1.2E-18 4.1E-23 180.2 19.7 169 264-452 125-321 (339)
24 1czf_A Polygalacturonase II; b 99.8 8.3E-18 2.8E-22 175.3 22.5 192 264-481 89-320 (362)
25 1hg8_A Endopolygalacturonase; 99.8 8.8E-18 3E-22 174.3 21.7 170 264-453 129-334 (349)
26 1ia5_A Polygalacturonase; glyc 99.8 1.2E-17 4E-22 172.8 21.9 193 264-481 66-297 (339)
27 1nhc_A Polygalacturonase I; be 99.8 7.5E-18 2.6E-22 174.0 19.4 168 264-452 125-320 (336)
28 1rmg_A Rgase A, rhamnogalactur 99.7 6E-17 2.1E-21 172.1 21.9 169 264-453 152-341 (422)
29 1k5c_A Endopolygalacturonase; 99.7 2.9E-17 9.8E-22 169.5 18.9 189 264-480 60-288 (335)
30 1x0c_A Isopullulanase; glycosi 99.7 6.5E-16 2.2E-20 168.7 21.3 247 141-453 222-521 (549)
31 1ogo_X Dextranase; hydrolase, 99.7 2.9E-16 1E-20 171.7 18.4 234 142-453 265-546 (574)
32 1h80_A IOTA-carrageenase; hydr 99.5 2.7E-13 9.3E-18 145.0 14.0 158 268-460 106-278 (464)
33 2inu_A Insulin fructotransfera 99.4 4.9E-13 1.7E-17 138.8 13.3 227 106-391 11-280 (410)
34 3gq8_A Preneck appendage prote 99.3 1.2E-10 4E-15 127.1 20.4 187 286-481 169-401 (609)
35 3gqn_A Preneck appendage prote 99.3 1.4E-10 5E-15 128.4 20.8 122 286-414 169-308 (772)
36 2x6w_A Tail spike protein; vir 99.3 1.5E-10 5E-15 125.8 19.9 207 264-503 200-445 (600)
37 2pyg_A Poly(beta-D-mannuronate 99.3 9.5E-11 3.3E-15 122.0 17.8 137 264-415 174-333 (377)
38 1ru4_A Pectate lyase, PEL9A; p 98.8 7.1E-08 2.4E-12 101.5 17.5 145 264-421 131-298 (400)
39 3eqn_A Glucan 1,3-beta-glucosi 98.7 1.4E-08 4.6E-13 112.7 7.3 66 105-178 396-464 (758)
40 1dbg_A Chondroitinase B; beta 98.4 5.4E-06 1.8E-10 89.5 15.7 118 270-394 125-272 (506)
41 1pxz_A Major pollen allergen J 98.3 4.5E-06 1.5E-10 86.1 12.3 106 286-392 106-233 (346)
42 3zsc_A Pectate trisaccharide-l 98.3 5.7E-06 2E-10 84.8 13.0 107 286-392 83-201 (340)
43 1pcl_A Pectate lyase E; lyase 98.3 7.4E-06 2.5E-10 84.7 13.9 120 270-392 79-234 (355)
44 3vmv_A Pectate lyase; polysacc 98.3 8.3E-06 2.8E-10 83.3 14.0 155 270-448 78-249 (326)
45 2qy1_A Pectate lyase II; GAG l 98.3 8.8E-06 3E-10 83.4 14.1 117 267-387 68-205 (330)
46 1pcl_A Pectate lyase E; lyase 98.2 3E-05 1E-09 80.1 17.7 113 264-386 97-249 (355)
47 1vbl_A Pectate lyase 47; PL 47 98.2 4E-06 1.4E-10 88.3 11.2 120 270-392 131-289 (416)
48 1air_A Pectate lyase C, PELC; 98.2 6.2E-06 2.1E-10 85.2 11.7 118 270-392 88-222 (353)
49 2o04_A Pectate lyase, PL; hexa 98.1 8.7E-06 3E-10 85.4 11.5 119 270-392 126-283 (399)
50 3zsc_A Pectate trisaccharide-l 98.1 5E-05 1.7E-09 77.9 16.5 107 264-385 84-215 (340)
51 1pxz_A Major pollen allergen J 98.1 1.3E-05 4.6E-10 82.6 12.0 130 265-416 108-272 (346)
52 1idk_A Pectin lyase A; signal, 98.1 2.5E-05 8.6E-10 80.8 13.1 63 293-355 132-198 (359)
53 1pe9_A Pectate lyase A; parall 98.0 1.7E-05 5.8E-10 82.1 10.9 113 271-386 87-238 (361)
54 2x3h_A K5 lyase, K5A lyase; ba 98.0 0.00053 1.8E-08 68.0 20.3 184 106-351 61-256 (542)
55 1air_A Pectate lyase C, PELC; 98.0 3.8E-05 1.3E-09 79.3 12.8 140 264-420 104-265 (353)
56 1gq8_A Pectinesterase; hydrola 98.0 5.2E-05 1.8E-09 77.3 13.1 105 269-386 92-209 (319)
57 1idk_A Pectin lyase A; signal, 97.9 9.7E-05 3.3E-09 76.4 14.0 135 264-420 125-284 (359)
58 1qcx_A Pectin lyase B; beta-he 97.9 4.3E-05 1.5E-09 79.1 11.3 46 310-355 151-198 (359)
59 3vmv_A Pectate lyase; polysacc 97.9 0.00016 5.4E-09 73.8 15.0 135 264-415 96-249 (326)
60 1xg2_A Pectinesterase 1; prote 97.9 5.3E-05 1.8E-09 77.2 10.8 76 269-354 88-169 (317)
61 1qcx_A Pectin lyase B; beta-he 97.9 0.00015 5E-09 75.1 14.0 135 264-419 125-283 (359)
62 2qy1_A Pectate lyase II; GAG l 97.9 9.2E-05 3.1E-09 75.8 12.3 140 264-420 87-254 (330)
63 1pe9_A Pectate lyase A; parall 97.6 0.00024 8E-09 73.6 11.1 110 264-385 104-259 (361)
64 1vbl_A Pectate lyase 47; PL 47 97.6 0.00015 5.2E-09 76.3 9.8 113 264-386 149-304 (416)
65 1ru4_A Pectate lyase, PEL9A; p 97.4 0.00032 1.1E-08 73.6 8.8 108 265-386 110-230 (400)
66 2nsp_A Pectinesterase A; micha 97.4 0.0011 3.9E-08 68.0 12.5 78 268-354 93-191 (342)
67 2o04_A Pectate lyase, PL; hexa 97.4 0.00043 1.5E-08 72.5 9.1 112 264-386 144-298 (399)
68 3uw0_A Pectinesterase; right-h 97.3 0.0015 5.3E-08 67.5 12.4 79 268-354 119-218 (364)
69 2inu_A Insulin fructotransfera 97.3 0.00031 1.1E-08 73.1 6.6 110 271-394 136-261 (410)
70 2vbk_A Tailspike-protein; vira 97.0 0.0054 1.9E-07 64.2 12.6 69 264-355 197-284 (514)
71 3grh_A YBHC, acyl-COA thioeste 96.9 0.035 1.2E-06 58.1 17.8 46 125-174 88-136 (422)
72 3t9g_A Pectate lyase; PL3, par 95.2 0.26 9E-06 45.9 12.6 50 295-351 53-103 (196)
73 3t9g_A Pectate lyase; PL3, par 94.9 0.6 2.1E-05 43.4 14.3 80 268-353 49-128 (196)
74 1dbg_A Chondroitinase B; beta 93.9 0.11 3.6E-06 56.1 7.8 139 269-415 226-391 (506)
75 1xg2_A Pectinesterase 1; prote 93.5 0.23 7.7E-06 50.3 9.2 110 292-415 88-205 (317)
76 1ee6_A Pectate lyase; parallel 93.0 0.88 3E-05 42.5 11.4 49 295-350 49-98 (197)
77 1ee6_A Pectate lyase; parallel 92.0 0.96 3.3E-05 42.2 10.3 80 267-352 44-123 (197)
78 3b4n_A Endo-pectate lyase; pec 91.2 4.1 0.00014 41.1 14.6 129 295-448 159-301 (344)
79 2nsp_A Pectinesterase A; micha 90.6 0.69 2.4E-05 47.2 8.7 111 292-415 94-230 (342)
80 1gq8_A Pectinesterase; hydrola 90.1 0.71 2.4E-05 46.7 8.1 110 293-416 93-210 (319)
81 3uw0_A Pectinesterase; right-h 85.7 2 6.8E-05 44.2 8.4 113 292-415 120-255 (364)
82 3riq_A Tailspike protein; righ 85.1 27 0.00091 36.2 15.9 70 343-414 262-346 (543)
83 3b4n_A Endo-pectate lyase; pec 84.5 8.2 0.00028 38.9 11.8 132 271-408 158-299 (344)
84 3ju4_A Endo-N-acetylneuraminid 77.3 0.69 2.4E-05 48.0 1.2 39 115-156 4-42 (670)
85 3p8k_A Hydrolase, carbon-nitro 53.9 6.5 0.00022 38.3 2.8 27 123-149 36-62 (281)
86 2vfm_A Bifunctional tail prote 53.1 17 0.00058 36.9 5.5 57 344-415 317-373 (559)
87 2v5i_A Salmonella typhimurium 52.3 15 0.00052 37.2 5.1 57 344-415 320-376 (559)
88 2es4_D Lipase chaperone; prote 52.2 8.9 0.0003 38.8 3.5 28 106-135 64-91 (332)
89 2xc1_A Bifunctional tail prote 43.3 27 0.00091 36.9 5.3 57 344-415 424-480 (666)
90 3hkx_A Amidase; alpha-beta-BET 42.4 11 0.00037 36.8 2.3 27 123-149 36-62 (283)
91 2lie_A CCL2 lectin; sugar bind 48.3 5.3 0.00018 34.8 0.0 43 106-153 59-104 (153)
92 3riq_A Tailspike protein; righ 39.9 48 0.0016 34.3 6.5 44 344-394 308-351 (543)
93 2x3h_A K5 lyase, K5A lyase; ba 38.0 3.2E+02 0.011 27.2 14.0 39 249-287 202-240 (542)
94 3dl8_E Protein-export membrane 36.6 13 0.00044 31.4 1.5 20 6-25 51-70 (107)
95 2v5i_A Salmonella typhimurium 35.9 3.6E+02 0.012 27.4 12.0 70 343-414 272-358 (559)
96 2vfm_A Bifunctional tail prote 34.7 3.8E+02 0.013 27.2 12.3 70 343-414 269-355 (559)
97 2w7z_A EFSQNR, pentapeptide re 34.0 2E+02 0.0067 26.1 9.6 31 272-305 34-64 (214)
98 2xc1_A Bifunctional tail prote 29.0 5.3E+02 0.018 27.3 12.2 70 343-414 376-462 (666)
99 2w7z_A EFSQNR, pentapeptide re 27.8 1.5E+02 0.0053 26.8 7.6 10 295-304 74-83 (214)
100 2l9u_A Receptor tyrosine-prote 27.5 8.4 0.00029 25.6 -0.9 17 15-39 18-34 (40)
101 3vu7_H DNA repair protein REV1 26.4 15 0.00053 31.7 0.3 14 123-136 38-51 (124)
102 3grh_A YBHC, acyl-COA thioeste 22.4 3.1E+02 0.011 28.4 9.3 81 266-354 196-296 (422)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=5.2e-65 Score=544.41 Aligned_cols=355 Identities=25% Similarity=0.371 Sum_probs=299.8
Q ss_pred CCcceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEEeeeccccccccceEEEEecceEEccCCCccc
Q 009748 106 HSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDW 185 (527)
Q Consensus 106 ~~~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~l~l~g~~~~sni~l~~~Gtl~~~~~~~~~ 185 (527)
++++|||++|||+|||++|||+|||+||++|++.||++|+||+| +|++++|.| +++++|+++|+|+++++..+|
T Consensus 24 ~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~c~~~ggg~v~vP~G-~yl~~~l~l-----~s~v~l~l~gtL~~s~d~~~y 97 (448)
T 3jur_A 24 PDREVNLLDFGARGDGRTDCSESFKRAIEELSKQGGGRLIVPEG-VFLTGPIHL-----KSNIELHVKGTIKFIPDPERY 97 (448)
T ss_dssp CSCEEEGGGGTCCCEEEEECHHHHHHHHHHHHHHTCEEEEECSS-EEEESCEEC-----CTTEEEEESSEEEECCCGGGG
T ss_pred CCcEEEEEecccCCCCCeecHHHHHHHHHhhhhcCCeEEEECCC-cEEEeeeEe-----CCCcEEEEEEEEEecCCHHHh
Confidence 45799999999999999999999999999876678899999999 899999998 789999999999999999988
Q ss_pred -ccc-----------eeeeEEeeeeeceEEeeceEeeCCc--eeeeecCCCCC----CCCCCc----cEeEecCCCCCCC
Q 009748 186 -GKG-----------LLWWLDFTKLKGITIQGKGIIDGRG--SVWWQDYPYDD----PIDDES----KLIIPLHNNTLPY 243 (527)
Q Consensus 186 -~~~-----------~~~~i~~~~~~nI~I~G~G~IdG~G--~~ww~~~~~~~----~~~~~~----~~~~~~~~~~~~~ 243 (527)
+.. ..+||.+.+++||+|+|+|+|||+| +.||......+ +..... ..+..+.
T Consensus 98 ~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~------ 171 (448)
T 3jur_A 98 LPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMA------ 171 (448)
T ss_dssp CSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHH------
T ss_pred CcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhh------
Confidence 321 2368999999999999999999999 89998521000 000000 0000000
Q ss_pred CCCCcccccccCCCCCCCcceEEEeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeecccce
Q 009748 244 KPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDV 323 (527)
Q Consensus 244 ~~~~~~~~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV 323 (527)
....+...++.......||++|.|.+|+|++|+|++++|+++|++++..|+||+|+|++|.++ ++|+||||+.+|+||
T Consensus 172 ~~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV 249 (448)
T 3jur_A 172 ERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYM 249 (448)
T ss_dssp HHTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEE
T ss_pred cccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCE
Confidence 000011111212334579999999999999999999999999999999999999999999986 689999999999999
Q ss_pred EEEecccccCCceeEeccC-----------CceeEEeeecc--CCCC-cccccccCCCCccceeeceeEeeeeeecceee
Q 009748 324 LIHTSNLACGDDCVSIQTG-----------CSNVYVHNVNC--GPGH-GISIGSLGKDNTKACVSNITVRDVMMHNTMNG 389 (527)
Q Consensus 324 ~I~n~~i~~gDD~Iai~sg-----------s~NV~I~n~~~--~~g~-GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~G 389 (527)
+|+||+|.++||||+++++ ++||+|+||+| ..+| ||+|||++ .+.|+||+|+||+|.++.+|
T Consensus 250 ~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~----~~~v~nV~v~n~~~~~t~~G 325 (448)
T 3jur_A 250 LIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM----SGGVRNVVARNNVYMNVERA 325 (448)
T ss_dssp EEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC----TTCEEEEEEESCEEESCSEE
T ss_pred EEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc----cCcEEEEEEEEEEEecccce
Confidence 9999999999999999997 89999999999 6677 89999985 46799999999999999999
Q ss_pred eEEeeeccCcceeeeEEeeeeEeeeeeecE-EEeeeeecCCccccccceEEeeceeeeEeeeeEEeeeeeeeecCCCcee
Q 009748 390 VRIKTWQGGSGSVQGVLFSNIQVSEVQLPI-VIDQFYCDKSTCKNQTSAVALSGITYERVKGTYTVKPVHFACSDSLPCV 468 (527)
Q Consensus 390 i~Ikt~~g~~G~V~NI~f~Ni~v~~v~~pi-~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~~~pi~i~c~~~~~~~ 468 (527)
++||+|.++.|.|+||+|+||+|+++.+|+ .|+++|+.. + ....+.|+||+|+||+++....++.|.|++..+|+
T Consensus 326 irIKt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~--~--~~~~~~i~nI~~~NI~~t~~~~~i~i~g~~~~p~~ 401 (448)
T 3jur_A 326 LRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNE--E--GEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVK 401 (448)
T ss_dssp EEEECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGC--C--CSCCCEEEEEEEESCEEEECSEEEEEECBTTBCEE
T ss_pred EEEEEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCC--C--CCCCceEEEEEEEeEEEEecceEEEEEeCCCCCEe
Confidence 999999988899999999999999999998 999999764 2 23456899999999999986678999999999999
Q ss_pred eeeeeeEeecchhh
Q 009748 469 DVTLSVIELKPVQE 482 (527)
Q Consensus 469 ~I~f~nV~v~~~~~ 482 (527)
||+|+||++++.+.
T Consensus 402 ~I~~~nv~i~~~~~ 415 (448)
T 3jur_A 402 DILISDTIIEGAKI 415 (448)
T ss_dssp EEEEEEEEEESCSE
T ss_pred eEEEEEEEEEcccc
Confidence 99999999998663
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=2.7e-61 Score=513.18 Aligned_cols=343 Identities=25% Similarity=0.462 Sum_probs=297.2
Q ss_pred CcceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEEee-eccccccccceEEEEecceEEccCCCccc
Q 009748 107 SSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGP-MSFSGPYCQANIIFQLDGTIIAPTGSKDW 185 (527)
Q Consensus 107 ~~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~-l~l~g~~~~sni~l~~~Gtl~~~~~~~~~ 185 (527)
.++|+|++|||++||++|||+|||+||++ |. ++++|+||+| +|++++ |.|.+ .++++|+++|+++++.+..
T Consensus 18 ~~~~~V~~~GA~~dg~tddT~Aiq~Ai~a-c~-~g~~V~vP~G-~Yli~~~l~l~g---~s~v~l~l~G~~l~~~~~~-- 89 (422)
T 1rmg_A 18 TKTCNILSYGAVADNSTDVGPAITSAWAA-CK-SGGLVYIPSG-NYALNTWVTLTG---GSATAIQLDGIIYRTGTAS-- 89 (422)
T ss_dssp HCEEEGGGGTCCCSSSSBCHHHHHHHHHH-HT-BTCEEEECSS-EEEECSCEEEES---CEEEEEEECSEEEECCCCS--
T ss_pred CcEEEeeeccccCCCCcccHHHHHHHHHH-CC-CCCEEEECCC-eEEeCCceeecC---CCeEEEEEcCcEEcccCCC--
Confidence 56899999999999999999999999995 54 4789999999 899985 99977 5899999999998865421
Q ss_pred ccceeeeEEeeeeeceEEeeceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcceE
Q 009748 186 GKGLLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTAL 265 (527)
Q Consensus 186 ~~~~~~~i~~~~~~nI~I~G~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i 265 (527)
.....++...++++++|+|.|+|||+|+.||... . .||++|
T Consensus 90 -~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~-----------------------------------~---~rp~~i 130 (422)
T 1rmg_A 90 -GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEG-----------------------------------T---YGARIL 130 (422)
T ss_dssp -SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTTT-----------------------------------C---CCCEEE
T ss_pred -CceEEEEecCceeEEeeccCEEEECCcchhhcCC-----------------------------------C---CCceEE
Confidence 1111223455667777889999999999999640 1 288999
Q ss_pred EEeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCceeEeccCCce
Q 009748 266 RFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSN 345 (527)
Q Consensus 266 ~~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~N 345 (527)
+|.+|+|++|+|++|+|+++|++++..|+||+|+|++|.+ .+.+|+|||++.+ +||+|+||+|.++||||+++++++|
T Consensus 131 ~~~~~~nv~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~n 208 (422)
T 1rmg_A 131 RLTDVTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANN 208 (422)
T ss_dssp EEEEEEEEEEEEEEEECCSSCSEEEEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEE
T ss_pred EEcccceEEEECeEEECCCceEEEEeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcC
Confidence 9999999999999999999999999999999999999999 5568999999999 9999999999999999999999999
Q ss_pred eEEeeeccCCCCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeeeeEeeeeeecEEEeeee
Q 009748 346 VYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFY 425 (527)
Q Consensus 346 V~I~n~~~~~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v~~pi~I~~~y 425 (527)
|+|+||+|..+|||+|||+|+ .+.++||+|+||+|.++.+|++||++.+ .|.|+||+|+||+|+++++||.|+++|
T Consensus 209 I~I~n~~~~~~~GisIGS~g~---~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~NI~~~~v~~~i~i~~~y 284 (422)
T 1rmg_A 209 ILVESIYCNWSGGCAMGSLGA---DTDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVLLENFIGHGNAYSLDIDGYW 284 (422)
T ss_dssp EEEEEEEEESSSEEEEEEECT---TEEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEEEEEEEEEEESCSEEEETBC
T ss_pred EEEEeEEEcCCcceeecccCC---CCcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEEEEeEEEECccccEEEEeec
Confidence 999999999999999999874 3579999999999999999999999754 589999999999999999999999999
Q ss_pred ecCCccccccceEEeeceeeeEeeeeEEe----eeeeeeecCCCceeeeeeeeEeecchhhhhcccCchhhhhcccCCCC
Q 009748 426 CDKSTCKNQTSAVALSGITYERVKGTYTV----KPVHFACSDSLPCVDVTLSVIELKPVQERYHMYDPYCWQAFGESTTP 501 (527)
Q Consensus 426 ~~~~~~~~~~~~~~i~nItf~NI~gt~~~----~pi~i~c~~~~~~~~I~f~nV~v~~~~~~~~~~~~~c~~v~g~~~~~ 501 (527)
+... ....+.+.|+||+|+||+++... .++.|.|++..+|+||+|+||+|+..++. ...+.|+|++|..
T Consensus 285 ~~~~--~~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~--~~~~~C~n~~g~g--- 357 (422)
T 1rmg_A 285 SSMT--AVAGDGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGS--SELYLCRSAYGSG--- 357 (422)
T ss_dssp TTSC--CBSSSCCEEEEEEEEEEEEEESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSS--CEEEEEESEEEES---
T ss_pred cCCC--cccCCCceEEEEEEEeEEEEecccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCC--ccceEEECCCccc---
Confidence 7532 23456789999999999999742 47899999999999999999999876642 2347899999864
Q ss_pred CCCCcchhccCCC
Q 009748 502 THPPIACLQKGKR 514 (527)
Q Consensus 502 ~~~p~~c~~~~~~ 514 (527)
.||+.+.|
T Consensus 358 -----~C~~~~~~ 365 (422)
T 1rmg_A 358 -----YCLKDSSS 365 (422)
T ss_dssp -----TTCBCCSS
T ss_pred -----cccCCCCC
Confidence 69988866
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=3.5e-60 Score=498.34 Aligned_cols=330 Identities=29% Similarity=0.434 Sum_probs=287.0
Q ss_pred ceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecC---ceeEEEeeeccccccccceEEEEecc--eEEccCCCc
Q 009748 109 VFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPA---ESVFLVGPMSFSGPYCQANIIFQLDG--TIIAPTGSK 183 (527)
Q Consensus 109 ~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~---G~~yl~~~l~l~g~~~~sni~l~~~G--tl~~~~~~~ 183 (527)
+|+|++|| .+|||+|||+||++ |..| ++|+||+ | +|++++|.| +++++|++++ +|+++.+..
T Consensus 14 ~~~v~~~G-----~~~dT~aiq~Ai~a-c~~G-g~v~~~~~~~g-~yl~g~i~l-----~s~vtL~l~~Ga~L~~s~~~~ 80 (376)
T 1bhe_A 14 SCTTLKAD-----SSTATSTIQKALNN-CDQG-KAVRLSAGSTS-VFLSGPLSL-----PSGVSLLIDKGVTLRAVNNAK 80 (376)
T ss_dssp EEEEEECC-----SSBCHHHHHHHHTT-CCTT-CEEEEECSSSS-EEEESCEEC-----CTTCEEEECTTCEEEECSCSG
T ss_pred eEEECCCC-----CCccHHHHHHHHHH-hccC-CcEEEECCCCc-eEEEeEEEE-----CCCCEEEECCCeEEEeCCCHH
Confidence 69999986 47999999999994 5554 5666554 6 999999999 7899999995 899999988
Q ss_pred ccccc-------------eeeeEEeeeeeceEEeeceEeeCCc--------eeeeecCCCCCCCCCCccEeEecCCCCCC
Q 009748 184 DWGKG-------------LLWWLDFTKLKGITIQGKGIIDGRG--------SVWWQDYPYDDPIDDESKLIIPLHNNTLP 242 (527)
Q Consensus 184 ~~~~~-------------~~~~i~~~~~~nI~I~G~G~IdG~G--------~~ww~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (527)
+|+.. ..+||.+.+++||+|+|.|+|||+| +.||..... .+
T Consensus 81 ~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~-------~~----------- 142 (376)
T 1bhe_A 81 SFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAAD-------AK----------- 142 (376)
T ss_dssp GGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHH-------HH-----------
T ss_pred HCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCcccccccccc-------cc-----------
Confidence 88632 3579999999999999999999999 467764100 00
Q ss_pred CCCCCcccccccCCCCCCCcceEEEeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeecccc
Q 009748 243 YKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKD 322 (527)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~n 322 (527)
.......||++|.|.+|+|++|+|++++|+++|++++..|++++|+|++|.++.+++|+||||+.+|+|
T Consensus 143 -----------~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~n 211 (376)
T 1bhe_A 143 -----------VKKLKQNTPRLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKN 211 (376)
T ss_dssp -----------HHTCEECCCCSEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEE
T ss_pred -----------ccCccCCCCeEEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCce
Confidence 001112489999999999999999999999999999999999999999999988889999999999999
Q ss_pred eEEEecccccCCceeEecc-----CCceeEEeeeccCCCCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeecc
Q 009748 323 VLIHTSNLACGDDCVSIQT-----GCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQG 397 (527)
Q Consensus 323 V~I~n~~i~~gDD~Iai~s-----gs~NV~I~n~~~~~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g 397 (527)
|+|+||+|.++||||++++ +++||+|+||+|..+|||+|||++ . .++||+|+||+|.++.+|++||+|++
T Consensus 212 V~I~n~~i~~gDDcIaiks~~~~~~s~nI~I~n~~~~~ghGisiGSe~----~-~v~nV~v~n~~~~~t~~GirIKt~~g 286 (376)
T 1bhe_A 212 ITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGSET----M-GVYNVTVDDLKMNGTTNGLRIKSDKS 286 (376)
T ss_dssp EEEESCEEECSSCSEEEEECTTSCCEEEEEEEEEEECSSSCEEEEEEE----S-SEEEEEEEEEEEESCSEEEEEECCTT
T ss_pred EEEEeCEEecCCCeEEEcccCCCCCceEEEEEeeEEEccccEEeccCC----c-cEeeEEEEeeEEeCCCcEEEEEEecC
Confidence 9999999999999999996 699999999999999999999984 2 79999999999999999999999999
Q ss_pred CcceeeeEEeeeeEeeeeeecEEEeeeeecCCccccccceEEeeceeeeEeeeeEEeeeeeeeecCCCceeeeeeeeEee
Q 009748 398 GSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYTVKPVHFACSDSLPCVDVTLSVIEL 477 (527)
Q Consensus 398 ~~G~V~NI~f~Ni~v~~v~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~~~pi~i~c~~~~~~~~I~f~nV~v 477 (527)
+.|.|+||+|+||+|+++++||.|++.|+... ....+.|+||+|+||+++.. .++.|.|++..+|++|+|+||+|
T Consensus 287 ~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~----~~~~~~i~ni~~~ni~gt~~-~~~~l~g~~~~~~~~I~l~nv~l 361 (376)
T 1bhe_A 287 AAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKE----GSNVPDWSDITFKDVTSETK-GVVVLNGENAKKPIEVTMKNVKL 361 (376)
T ss_dssp TCCEEEEEEEEEEEEESCSEEEEEETTSSCCC----CCCCCEEEEEEEEEEEECSC-CEEEEECTTCSSCEEEEEEEEEC
T ss_pred CCceEeeEEEEeEEEeCCCceEEEEeeccCCC----CCcCcEEEEEEEEEEEEEec-ceEEEEeCCCCCeeeEEEEeEEE
Confidence 99999999999999999999999999997642 23346899999999999964 47899999999999999999999
Q ss_pred cchhhhhcccCchhhhhcc
Q 009748 478 KPVQERYHMYDPYCWQAFG 496 (527)
Q Consensus 478 ~~~~~~~~~~~~~c~~v~g 496 (527)
...+ .+.|.||+.
T Consensus 362 ~~~~------~~~~~~~~~ 374 (376)
T 1bhe_A 362 TSDS------TWQIKNVNV 374 (376)
T ss_dssp CTTC------EEEEESEEE
T ss_pred ecCC------CceEEEEEe
Confidence 8764 277998864
No 4
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=8.2e-57 Score=498.53 Aligned_cols=359 Identities=22% Similarity=0.347 Sum_probs=283.7
Q ss_pred CCcceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEEeeeccccccccceEEEEec--ceEEccCCCc
Q 009748 106 HSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLD--GTIIAPTGSK 183 (527)
Q Consensus 106 ~~~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~l~l~g~~~~sni~l~~~--Gtl~~~~~~~ 183 (527)
...+|||++|||++||.+|||+|||+||++ |.. |++|+||+| +|++++|.| +++++|+|+ |+|+++.+..
T Consensus 153 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~-c~~-g~~v~vP~G-~y~~g~i~l-----ks~v~L~l~~gatL~~s~d~~ 224 (608)
T 2uvf_A 153 KPQIVNVRDFGAIDDGKTLNTKAIQQAIDS-CKP-GCRVEIPAG-TYKSGALWL-----KSDMTLNLQAGAILLGSENPD 224 (608)
T ss_dssp CCCEEEGGGGTCCSSSSCCCHHHHHHHHHT-CCT-TEEEEECSE-EEEECCEEC-----CSSEEEEECTTEEEEECSCGG
T ss_pred CCCEEecccccccCCCCccCHHHHHHHHHh-cCC-CCEEEECCC-ceEecceec-----cCceEEEecCCcEEEecCCHH
Confidence 457999999999999999999999999985 554 789999999 899999999 789999995 7899999988
Q ss_pred ccccce-----------eeeEEeee--------eeceEEeeceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCC
Q 009748 184 DWGKGL-----------LWWLDFTK--------LKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYK 244 (527)
Q Consensus 184 ~~~~~~-----------~~~i~~~~--------~~nI~I~G~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (527)
+|+.+. ..+|.+.+ ++||+|+|.|+|||+|..||......+ ...+ -.|.+.....+.
T Consensus 225 ~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~---~~g~-~~p~~~~~~~~~ 300 (608)
T 2uvf_A 225 DYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITD---ELGR-SLPQYVASKNSK 300 (608)
T ss_dssp GSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEEC---TTSC-EEEEECCCCTTT
T ss_pred HCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCccccccccccccc---cccc-cccccccccccc
Confidence 886421 13566666 799999999999999998885310000 0000 000000000000
Q ss_pred CC--Cccc---------c--cccCCCCCCCcceEEEeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCC
Q 009748 245 PP--TPIR---------S--ELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPN 311 (527)
Q Consensus 245 ~~--~~~~---------~--~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~n 311 (527)
.. ..+. . .........||++|.|.+|+|++|+|++|+|+++|++++..|+||+|+|++|.. .+++|
T Consensus 301 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~N 379 (608)
T 2uvf_A 301 VHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANN 379 (608)
T ss_dssp HHHHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTT
T ss_pred ccccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCC
Confidence 00 0000 0 000000014899999999999999999999999999999999999999999865 45789
Q ss_pred CCceeeecccceEEEecccccCCceeEeccC----------CceeEEeeeccCCCCcc-cccccCCCCccceeeceeEee
Q 009748 312 TDGIHLQNSKDVLIHTSNLACGDDCVSIQTG----------CSNVYVHNVNCGPGHGI-SIGSLGKDNTKACVSNITVRD 380 (527)
Q Consensus 312 tDGI~i~~s~nV~I~n~~i~~gDD~Iai~sg----------s~NV~I~n~~~~~g~GI-~IGs~g~~~~~~~v~nI~v~N 380 (527)
+|||++.+|+||+|+||+|.++||||+++++ ++||+|+||+|..+||+ .|||+ +.+.|+||+|+|
T Consensus 380 tDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n 455 (608)
T 2uvf_A 380 GDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAEN 455 (608)
T ss_dssp CCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEES
T ss_pred CCeEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEe
Confidence 9999999999999999999999999999986 79999999999999986 58996 567899999999
Q ss_pred eeeecceeeeEEeeeccCcceeeeEEeeeeEeeee-eecEEEeeeeecCCc--------cccccceEEeeceeeeEeeee
Q 009748 381 VMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEV-QLPIVIDQFYCDKST--------CKNQTSAVALSGITYERVKGT 451 (527)
Q Consensus 381 i~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v-~~pi~I~~~y~~~~~--------~~~~~~~~~i~nItf~NI~gt 451 (527)
|+|.++.+|++||+|.++.|.|+||+|+||+|+++ ++||.|++.|++... |....+.+.|+||+|+|++++
T Consensus 456 ~~~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt 535 (608)
T 2uvf_A 456 NVMYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGK 535 (608)
T ss_dssp CEEESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSS
T ss_pred EEEECCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeece
Confidence 99999999999999999889999999999999999 599999999986432 333345667777777777765
Q ss_pred EEeeeeeeeecCCCceeeeeeeeEeecchh
Q 009748 452 YTVKPVHFACSDSLPCVDVTLSVIELKPVQ 481 (527)
Q Consensus 452 ~~~~pi~i~c~~~~~~~~I~f~nV~v~~~~ 481 (527)
.....+...|....+|+||+|+||++++.+
T Consensus 536 ~~~i~i~g~~~~~~p~~ni~~~nv~i~~~~ 565 (608)
T 2uvf_A 536 NPSIEIKGDTANKAWHRLVHVNNVQLNNVT 565 (608)
T ss_dssp SCSEEEECBGGGTBCEEEEEEEEEEEESCC
T ss_pred EEeEEEEEEcCCCCccccEEEEeEEEEccC
Confidence 322345566777789999999999998865
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.6e-56 Score=467.56 Aligned_cols=322 Identities=26% Similarity=0.422 Sum_probs=279.4
Q ss_pred CcceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEEeee-ccccccccceEEEEecceEEccCCCccc
Q 009748 107 SSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGPM-SFSGPYCQANIIFQLDGTIIAPTGSKDW 185 (527)
Q Consensus 107 ~~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~l-~l~g~~~~sni~l~~~Gtl~~~~~~~~~ 185 (527)
..+|.|++ ++|||+|+++|...++++|+||+| +|+. | .| +++++|+++|++.+. ...|
T Consensus 27 ~~~Ctv~~-----------~~aiq~ai~~c~~~~g~~v~vP~G-~~l~--l~~l-----~~~~~l~~~g~~~~~--~~~w 85 (362)
T 1czf_A 27 RDSCTFTT-----------AAAAKAGKAKCSTITLNNIEVPAG-TTLD--LTGL-----TSGTKVIFEGTTTFQ--YEEW 85 (362)
T ss_dssp -CEEEESS-----------HHHHHHHGGGCSEEEEESCEECTT-CCEE--ECSC-----CTTCEEEEESEEEEC--CCCS
T ss_pred CCEEEECC-----------HHHHHHHHHHhhccCCCEEEECCC-EEEE--eecc-----CCCeEEEEeCcEEec--cccC
Confidence 36788887 679999999876667899999999 5552 3 33 568999999998763 3567
Q ss_pred ccceeeeEEeeeeeceEEee--ceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcc
Q 009748 186 GKGLLWWLDFTKLKGITIQG--KGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPT 263 (527)
Q Consensus 186 ~~~~~~~i~~~~~~nI~I~G--~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~ 263 (527)
.+ .||.+ +.+||+|+| .|+|||+|+.||.... .....||+
T Consensus 86 ~g---~~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~----------------------------------~~~~~rP~ 127 (362)
T 1czf_A 86 AG---PLISM-SGEHITVTGASGHLINCDGARWWDGKG----------------------------------TSGKKKPK 127 (362)
T ss_dssp CC---CSEEE-EEESCEEEECTTCEEECCGGGTCCSCT----------------------------------TSSSCCCC
T ss_pred CC---cEEEE-eCccEEEEcCCCcEEECCCchhhcccC----------------------------------CCCCCCCe
Confidence 53 67877 559999999 7999999999998621 01235899
Q ss_pred eEEEeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCC-C---CCCCCceeeecccceEEEecccccCCceeEe
Q 009748 264 ALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPG-D---SPNTDGIHLQNSKDVLIHTSNLACGDDCVSI 339 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~-~---~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai 339 (527)
+++|.+|+|++|+|++++|+|+|++++. |+||+|+|++|.++. + ++|+||||+.+|+||+|+||+|.++||||++
T Consensus 128 ~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIai 206 (362)
T 1czf_A 128 FFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAV 206 (362)
T ss_dssp CEEEEEEETEEEESCEEECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEE
T ss_pred EEEEeecccEEEEEEEEecCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEE
Confidence 9999999999999999999999999999 999999999999863 3 7899999999999999999999999999999
Q ss_pred ccCCceeEEeeeccCCCCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeeeeEeeeee-ec
Q 009748 340 QTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQ-LP 418 (527)
Q Consensus 340 ~sgs~NV~I~n~~~~~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v~-~p 418 (527)
+++ +||+|+||+|.++|||+|||+|.+ +.+.|+||+|+||+|.++.+|+|||+|+++.|.|+||+|+||+|+++. +|
T Consensus 207 ksg-~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~ 284 (362)
T 1czf_A 207 NSG-ENIWFTGGTCIGGHGLSIGSVGDR-SNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYG 284 (362)
T ss_dssp SSE-EEEEEESCEEESSCCEEEEEECSS-SCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEE
T ss_pred eCC-eEEEEEEEEEeCCceeEEeecccc-CCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECccccc
Confidence 996 999999999999999999999765 568899999999999999999999999999999999999999999997 79
Q ss_pred EEEeeeeecCCccccccceEEeeceeeeEeeeeEEe--eeeeeeecCCCceeeeeeeeEeecchhhhhcccCchhhhhcc
Q 009748 419 IVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYTV--KPVHFACSDSLPCVDVTLSVIELKPVQERYHMYDPYCWQAFG 496 (527)
Q Consensus 419 i~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~~--~pi~i~c~~~~~~~~I~f~nV~v~~~~~~~~~~~~~c~~v~g 496 (527)
|.|++.|+....+..+.+.+.|+||+|+||+++... .++.|.|+ ..+|+||+|+||+|++.+ ....|+|+..
T Consensus 285 i~I~~~Y~~~~~~~~p~~~~~i~nI~~~ni~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~~~-----~~~~C~n~~~ 358 (362)
T 1czf_A 285 VVIQQDYEDGKPTGKPTNGVTIQDVKLESVTGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTGGK-----KSTACKNFPS 358 (362)
T ss_dssp EEEEEEEETTEECSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-TTTEEEEEEEEEEEESSB-----CCSCCBSCCT
T ss_pred EEEEEecCCCCCCCCCCCCceEEEEEEEEEEEEecCCceEEEEEeC-CCcCcCEEEEeEEEEcCC-----CcccCcCCCC
Confidence 999999987544433446789999999999999764 68999998 789999999999998643 2357999885
No 6
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=3.9e-56 Score=460.81 Aligned_cols=318 Identities=28% Similarity=0.437 Sum_probs=275.9
Q ss_pred CcchHHHHHHHHhcccceeeeEEecCceeEEEeee-ccccccccceEEEEecceEEccCCCcccccceeeeEEeeeeece
Q 009748 123 SDDTKAFEAAWAAACKVEASIMVVPAESVFLVGPM-SFSGPYCQANIIFQLDGTIIAPTGSKDWGKGLLWWLDFTKLKGI 201 (527)
Q Consensus 123 tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~l-~l~g~~~~sni~l~~~Gtl~~~~~~~~~~~~~~~~i~~~~~~nI 201 (527)
..||+|||+|+++|...++++|+||+| +|+ .| .| +++++|+++|++.+. ...|.+ .||.+. .+||
T Consensus 5 ~~~t~aiq~ai~~c~~~gg~~v~vP~G-~~~--~l~~l-----~~~~~l~~~g~~~~~--~~~w~g---~li~~~-~~nv 70 (336)
T 1nhc_A 5 FTSASEASESISSCSDVVLSSIEVPAG-ETL--DLSDA-----ADGSTITFEGTTSFG--YKEWKG---PLIRFG-GKDL 70 (336)
T ss_dssp ESSHHHHHHHGGGCSEEEEESCEECTT-CCE--ECTTC-----CTTCEEEEESEEEEC--CCCSCC---CSEECC-EESC
T ss_pred ECCHHHHHHHHHHhhccCCCeEEECCC-EEE--Eeecc-----CCCeEEEEeceEEcc--cccccC---cEEEEe-cCCE
Confidence 357999999999877777899999999 665 24 33 678999999998863 345643 577775 5999
Q ss_pred EEeec--eEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcceEEEeeeeeEEEEEEE
Q 009748 202 TIQGK--GIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGIT 279 (527)
Q Consensus 202 ~I~G~--G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~~~~nv~I~git 279 (527)
+|+|. |+|||+|+.||..... +....||++|+|.+|+|++|+|++
T Consensus 71 ~I~G~~gG~IdG~G~~~w~~~~~---------------------------------~~~~~rp~~i~~~~~~nv~i~~i~ 117 (336)
T 1nhc_A 71 TVTMADGAVIDGDGSRWWDSKGT---------------------------------NGGKTKPKFMYIHDVEDSTFKGIN 117 (336)
T ss_dssp EEEECTTCEEECCGGGTCCSCTT---------------------------------TSSSCCCCCEEEEEEEEEEEESCE
T ss_pred EEEcCCCeEEECCccccccccCc---------------------------------CCCCCCceEEEEeeeCcEEEEEEE
Confidence 99997 7999999999986210 112358999999999999999999
Q ss_pred EecCCcceeeecceeEEEEEEeeecCCCC----CCCCCceeeecccceEEEecccccCCceeEeccCCceeEEeeeccCC
Q 009748 280 IQNSPQCHLKFDNCIGVVVHDVSVSSPGD----SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGP 355 (527)
Q Consensus 280 i~ns~~~~i~~~~c~nV~I~nv~I~s~~~----~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~I~n~~~~~ 355 (527)
|+|+|+|++++. |++|+|+|++|.++.. ++|+||||+.+|+||+|+||+|.++||||+++++ +||+|+||+|.+
T Consensus 118 i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~ 195 (336)
T 1nhc_A 118 IKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINSG-ESISFTGGTCSG 195 (336)
T ss_dssp EECCSSCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESSE-EEEEEESCEEES
T ss_pred EEeCCccEEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCC-eEEEEEeEEEEC
Confidence 999999999999 9999999999999743 7999999999999999999999999999999996 999999999999
Q ss_pred CCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeeeeEeeeeee-cEEEeeeeecCCccccc
Q 009748 356 GHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQL-PIVIDQFYCDKSTCKNQ 434 (527)
Q Consensus 356 g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v~~-pi~I~~~y~~~~~~~~~ 434 (527)
+|||+|||+|.+ +.+.++||+|+|++|.++.+|++||+|+++.|.|+||+|+||+|++++. ||.|++.|+....+..+
T Consensus 196 ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 274 (336)
T 1nhc_A 196 GHGLSIGSVGGR-DDNTVKNVTISDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTP 274 (336)
T ss_dssp SSEEEEEEESSS-SCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred CcCceEccCccc-cCCCEEEEEEEeeEEECCCcEEEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCC
Confidence 999999998765 5688999999999999999999999999999999999999999999985 99999999875444444
Q ss_pred cceEEeeceeeeEeeeeEEe--eeeeeeecCCCceeeeeeeeEeecchhhhhcccCchhhhhcc
Q 009748 435 TSAVALSGITYERVKGTYTV--KPVHFACSDSLPCVDVTLSVIELKPVQERYHMYDPYCWQAFG 496 (527)
Q Consensus 435 ~~~~~i~nItf~NI~gt~~~--~pi~i~c~~~~~~~~I~f~nV~v~~~~~~~~~~~~~c~~v~g 496 (527)
.+.+.|+||+|+||+++... .++.|.|+ ..+|+||+|+||+|++.+ ....|+|+.+
T Consensus 275 ~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~~-----~~~~C~n~~~ 332 (336)
T 1nhc_A 275 STGIPITDVTVDGVTGTLEDDATQVYILCG-DGSCSDWTWSGVDLSGGK-----TSDKCENVPS 332 (336)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCEEEEEECC-TTCEEEEEEEEEEEESSB-----CCSCCBSCCT
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEcC-CCcEecEEEEeEEEEcCC-----CCcccCCCCC
Confidence 45789999999999999765 68999995 889999999999998743 2357999986
No 7
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=3.6e-56 Score=461.61 Aligned_cols=318 Identities=28% Similarity=0.451 Sum_probs=275.6
Q ss_pred cchHHHHHHHHhcccceeeeEEecCceeEEEeee-ccccccccceEEEEecceEEccCCCcccccceeeeEEeeeeeceE
Q 009748 124 DDTKAFEAAWAAACKVEASIMVVPAESVFLVGPM-SFSGPYCQANIIFQLDGTIIAPTGSKDWGKGLLWWLDFTKLKGIT 202 (527)
Q Consensus 124 Ddt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~l-~l~g~~~~sni~l~~~Gtl~~~~~~~~~~~~~~~~i~~~~~~nI~ 202 (527)
.||+|||+|+++|...++++|+||+| +|+. | .| +++++|+++|++.+. ...|.+ .||.+.. +||+
T Consensus 6 ~dt~aiq~ai~~c~~~~g~~v~vP~G-~~~~--l~~l-----~~~~~l~~~g~~~~~--~~~w~g---~~i~~~~-~nv~ 71 (339)
T 2iq7_A 6 TDAAAAIKGKASCTSIILNGIVVPAG-TTLD--MTGL-----KSGTTVTFQGKTTFG--YKEWEG---PLISFSG-TNIN 71 (339)
T ss_dssp SCHHHHHHHGGGCSEEEEESCEECTT-CCEE--ECSC-----CTTCEEEEESEEEEC--CCCSCC---CSEEEEE-ESCE
T ss_pred CCHHHHHHHHHHhhccCCCeEEECCC-EEEE--eecc-----CCCeEEEEeCcEEcc--cccccC---cEEEEEc-ccEE
Confidence 47999999999877777899999999 5653 3 33 678999999998763 355643 5777755 9999
Q ss_pred Eeec--eEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcceEEEeeeeeEEEEEEEE
Q 009748 203 IQGK--GIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITI 280 (527)
Q Consensus 203 I~G~--G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~~~~nv~I~giti 280 (527)
|+|. |+|||+|+.||.... ......||++|+|.+|+|++|+|+++
T Consensus 72 I~G~~gG~IdG~G~~~w~~~~---------------------------------~~~~~~rp~~i~~~~~~nv~i~giti 118 (339)
T 2iq7_A 72 INGASGHSIDCQGSRWWDSKG---------------------------------SNGGKTKPKFFYAHSLKSSNIKGLNV 118 (339)
T ss_dssp EEECTTCEEECCGGGTCCSCG---------------------------------GGSSSCCCCCEEEEEEEEEEEECCEE
T ss_pred EEcCCCCEEECCccccccccc---------------------------------ccCCCCCCeEEEEeeeCcEEEEEEEE
Confidence 9997 799999999998621 01123589999999999999999999
Q ss_pred ecCCcceeeecceeEEEEEEeeecCCC-C---CCCCCceeeecccceEEEecccccCCceeEeccCCceeEEeeeccCCC
Q 009748 281 QNSPQCHLKFDNCIGVVVHDVSVSSPG-D---SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPG 356 (527)
Q Consensus 281 ~ns~~~~i~~~~c~nV~I~nv~I~s~~-~---~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~I~n~~~~~g 356 (527)
+|+++|++++..|++|+|+|++|.++. + ++|+|||++.+|+||+|+||+|.++||||+++++ +||+|+||+|.++
T Consensus 119 ~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~g 197 (339)
T 2iq7_A 119 LNTPVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINSG-TNITFTGGTCSGG 197 (339)
T ss_dssp ECCSSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESS
T ss_pred EeCCcceEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcCC-ccEEEEeEEEECC
Confidence 999999999999999999999999874 2 7899999999999999999999999999999995 9999999999999
Q ss_pred CcccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeeeeEeeeeee-cEEEeeeeecCCcccccc
Q 009748 357 HGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQL-PIVIDQFYCDKSTCKNQT 435 (527)
Q Consensus 357 ~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v~~-pi~I~~~y~~~~~~~~~~ 435 (527)
|||+|||+|++ +.+.++||+|+||+|.++.+|++||+|+++.|.|+||+|+||+|++++. ||.|++.|+....+..+.
T Consensus 198 hGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~ 276 (339)
T 2iq7_A 198 HGLSIGSVGGR-SDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPT 276 (339)
T ss_dssp CCEEEEEESSS-SCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCC
T ss_pred ceEEECcCCcc-cCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCCC
Confidence 99999998765 5688999999999999999999999999989999999999999999986 999999998754443344
Q ss_pred ceEEeeceeeeEeeeeEEe--eeeeeeecCCCceeeeeeeeEeecchhhhhcccCchhhhhcc
Q 009748 436 SAVALSGITYERVKGTYTV--KPVHFACSDSLPCVDVTLSVIELKPVQERYHMYDPYCWQAFG 496 (527)
Q Consensus 436 ~~~~i~nItf~NI~gt~~~--~pi~i~c~~~~~~~~I~f~nV~v~~~~~~~~~~~~~c~~v~g 496 (527)
+.+.|+||+|+||+++... .++.|.|+ ..+|+||+|+||+|++.+ ....|+|+..
T Consensus 277 ~~~~i~ni~~~ni~gt~~~~~~~~~i~c~-~~~c~ni~~~nv~i~~~~-----~~~~C~n~~~ 333 (339)
T 2iq7_A 277 NGVPITGLTLSKITGSVASSGTNVYILCA-SGACSNWKWSGVSVTGGK-----KSTKCSNIPS 333 (339)
T ss_dssp SSSCEEEEEEEEEEEEECTTSEEEEEECC-TTCEEEEEEEEEEEESSB-----CCSCCBCCCT
T ss_pred CCceEEEEEEEeEEEEeCCCCEEEEEEeC-CCcEecEEEEeEEEEcCC-----CcccccCCCC
Confidence 5689999999999999764 68999995 889999999999998643 2357999874
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=1.3e-55 Score=458.76 Aligned_cols=319 Identities=24% Similarity=0.392 Sum_probs=274.5
Q ss_pred chHHHHHHHHhcccceeeeEEecCceeEEEeee-ccccccccceEEEEecceEEccCCCcccccceeeeEEeeeeeceEE
Q 009748 125 DTKAFEAAWAAACKVEASIMVVPAESVFLVGPM-SFSGPYCQANIIFQLDGTIIAPTGSKDWGKGLLWWLDFTKLKGITI 203 (527)
Q Consensus 125 dt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~l-~l~g~~~~sni~l~~~Gtl~~~~~~~~~~~~~~~~i~~~~~~nI~I 203 (527)
||+|||+|+++|...++++|+||+| +|+. | .| +++++|+++|++++. ...|.. ..||.+ +.+||+|
T Consensus 7 ~t~aiq~ai~~c~~~gg~~v~vP~G-~~l~--l~~l-----~~~~~l~~~g~~~~~--~~~w~~--g~~i~~-~~~ni~I 73 (349)
T 1hg8_A 7 EYSGLATAVSSCKNIVLNGFQVPTG-KQLD--LSSL-----QNDSTVTFKGTTTFA--TTADND--FNPIVI-SGSNITI 73 (349)
T ss_dssp SGGGHHHHHHHCSEEEECCCEECTT-CCEE--ETTC-----CTTCEEEECSEEEEC--CCCCTT--CCSEEE-EEESCEE
T ss_pred CHHHHHHHHHhccccCCCEEEECCC-EEEE--eecc-----CCCeEEEEcCceecc--cccccC--CceEEE-ECccEEE
Confidence 7999999999877777899999999 6653 3 33 678999999998763 256632 267877 4599999
Q ss_pred ee--ceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcceEEE-e-eeeeEEEEEEE
Q 009748 204 QG--KGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRF-Y-GSFNVTVTGIT 279 (527)
Q Consensus 204 ~G--~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~-~-~~~nv~I~git 279 (527)
+| .|+|||+|+.||..... ......||++|.| . .|+|++|+|++
T Consensus 74 ~G~~~G~IdG~G~~ww~~~~~--------------------------------~~~~~~rP~~i~~~~~~~~nv~I~git 121 (349)
T 1hg8_A 74 TGASGHVIDGNGQAYWDGKGS--------------------------------NSNSNQKPDHFIVVQKTTGNSKITNLN 121 (349)
T ss_dssp EECTTCEEECCGGGTCCSCTT--------------------------------CTTSCCCCSEEEEEEEEESSEEEESCE
T ss_pred EecCCCEEcCCcchhhhcccc--------------------------------cCCCCCCCeEEEEeecCcCcEEEEEEE
Confidence 99 69999999999986210 0011158999999 7 78899999999
Q ss_pred EecCCcceeeecceeEEEEEEeeecCCC-C-----------CCCCCceeeecccceEEEecccccCCceeEeccCCceeE
Q 009748 280 IQNSPQCHLKFDNCIGVVVHDVSVSSPG-D-----------SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVY 347 (527)
Q Consensus 280 i~ns~~~~i~~~~c~nV~I~nv~I~s~~-~-----------~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~ 347 (527)
++|+++|++++..|++|+|+|++|.++. + ++|+|||++.+|+||+|+||+|.++||||+++++ +||+
T Consensus 122 i~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg-~nI~ 200 (349)
T 1hg8_A 122 IQNWPVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSG-TNIV 200 (349)
T ss_dssp EECCSSEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSE-EEEE
T ss_pred EEcCCCceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCC-eEEE
Confidence 9999999999999999999999999852 3 5899999999999999999999999999999995 9999
Q ss_pred EeeeccCCCCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeeeeEeeeee-ecEEEeeeee
Q 009748 348 VHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQ-LPIVIDQFYC 426 (527)
Q Consensus 348 I~n~~~~~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v~-~pi~I~~~y~ 426 (527)
|+||+|..+|||+|||+|++ +.+.++||+|+||+|.++.+|++||+|+++.|.|+||+|+||+|+++. +||.|++.|+
T Consensus 201 i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~ 279 (349)
T 1hg8_A 201 VSNMYCSGGHGLSIGSVGGK-SDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYL 279 (349)
T ss_dssp EEEEEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEEC
T ss_pred EEeEEEeCCcceEEcccccc-ccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeecc
Confidence 99999999999999999876 568899999999999999999999999998999999999999999997 7999999998
Q ss_pred cCCccccccceEEeeceeeeEeeeeEEe--eeeeeeecCCCceeeeeeeeEeecchhhhhcccCchhhhhcc
Q 009748 427 DKSTCKNQTSAVALSGITYERVKGTYTV--KPVHFACSDSLPCVDVTLSVIELKPVQERYHMYDPYCWQAFG 496 (527)
Q Consensus 427 ~~~~~~~~~~~~~i~nItf~NI~gt~~~--~pi~i~c~~~~~~~~I~f~nV~v~~~~~~~~~~~~~c~~v~g 496 (527)
....+..+.+.+.|+||+|+||+++... .++.|.|+ ..+|+||+|+||+|++.+. ...|+|+.+
T Consensus 280 ~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~~~-----~~~C~n~~~ 345 (349)
T 1hg8_A 280 NGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG-DGSCSGFTFSGNAITGGGK-----TSSCNYPTN 345 (349)
T ss_dssp SSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-SSCEEEEEEESCEEECCSS-----CCEECSSSS
T ss_pred CCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC-CCcCcCEEEEeEEEEcCCC-----CeeeeCCCC
Confidence 8654444456789999999999999764 58999998 6899999999999987432 357999876
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=3.2e-55 Score=454.32 Aligned_cols=314 Identities=25% Similarity=0.417 Sum_probs=271.8
Q ss_pred hHHHHHHHHhcccceeeeEEecCceeEEEeee-ccccccccceEEEEecceEEccCCCcccccceeeeEEeeeeeceEEe
Q 009748 126 TKAFEAAWAAACKVEASIMVVPAESVFLVGPM-SFSGPYCQANIIFQLDGTIIAPTGSKDWGKGLLWWLDFTKLKGITIQ 204 (527)
Q Consensus 126 t~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~l-~l~g~~~~sni~l~~~Gtl~~~~~~~~~~~~~~~~i~~~~~~nI~I~ 204 (527)
++|||+|+++|...++++|+||+| +|+. | .| +++++|+++|++.+. ...|.+ +||.+.. +||+|+
T Consensus 12 ~~aiq~ai~~c~~~gg~~v~vP~G-~~l~--l~~l-----~~~~~l~~~g~~~~~--~~~w~g---~li~~~~-~nv~I~ 77 (339)
T 1ia5_A 12 ASSASKSKTSCSTIVLSNVAVPSG-TTLD--LTKL-----NDGTHVIFSGETTFG--YKEWSG---PLISVSG-SDLTIT 77 (339)
T ss_dssp HHHHHHHGGGCSEEEEESCEECTT-CCEE--ECSC-----CTTCEEEEESEEEEC--CCCSCC---CSEEEEE-ESCEEE
T ss_pred hHHHHHHHHHhhccCCCeEEECCC-EEEE--eecc-----CCCeEEEEeCcEEcc--cccccC---cEEEEEc-CcEEEE
Confidence 679999999877777899999999 6653 3 33 678999999998763 355643 5777755 999999
Q ss_pred ec--eEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcceEEEeeeeeEEEEEEEEec
Q 009748 205 GK--GIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQN 282 (527)
Q Consensus 205 G~--G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~~~~nv~I~giti~n 282 (527)
|. |+|||+|+.||..... .....||++|+|.+|+|++|+|++++|
T Consensus 78 G~~gG~IdG~G~~~w~~~~~---------------------------------~~~~~rp~~i~~~~~~nv~i~~i~i~n 124 (339)
T 1ia5_A 78 GASGHSINGDGSRWWDGEGG---------------------------------NGGKTKPKFFAAHSLTNSVISGLKIVN 124 (339)
T ss_dssp ECTTCEEECCGGGTCSSCTT---------------------------------TSSSCCCCCEEEEEEEEEEEESCEEEC
T ss_pred cCCCeEEeCCCCcccccccc---------------------------------CCCCCCCeEEEEeecCcEEEEEEEEEc
Confidence 97 7999999999986210 112358999999999999999999999
Q ss_pred CCcceeeecceeEEEEEEeeecCCC-C---CCCCCceeeecccceEEEecccccCCceeEeccCCceeEEeeeccCCCCc
Q 009748 283 SPQCHLKFDNCIGVVVHDVSVSSPG-D---SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHG 358 (527)
Q Consensus 283 s~~~~i~~~~c~nV~I~nv~I~s~~-~---~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~I~n~~~~~g~G 358 (527)
+++|++++..|++|+|+|++|.++. + ++|+|||++.+|+||+|+||+|.++||||+++++ +||+|+||+|.++||
T Consensus 125 sp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghG 203 (339)
T 1ia5_A 125 SPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSG-ENIYFSGGYCSGGHG 203 (339)
T ss_dssp CSSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSSC
T ss_pred CCcceEEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeCC-eEEEEEeEEEECCce
Confidence 9999999999999999999999863 3 7899999999999999999999999999999996 999999999999999
Q ss_pred ccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeeeeEeeeeee-cEEEeeeeecCCccccccce
Q 009748 359 ISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQL-PIVIDQFYCDKSTCKNQTSA 437 (527)
Q Consensus 359 I~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v~~-pi~I~~~y~~~~~~~~~~~~ 437 (527)
|+|||++.+ +.+.++||+|+||+|.++.+|++||+|+++.|.|+||+|+||+|++++. ||.|++.|. ..+..+.+.
T Consensus 204 isiGS~g~~-~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~--~~~~~p~~~ 280 (339)
T 1ia5_A 204 LSIGSVGGR-SDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYG--DTSSTPTTG 280 (339)
T ss_dssp EEEEEECSS-SCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEET--CTTSCCCSS
T ss_pred EEECcCCcc-cCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCC--CCCCCCcCC
Confidence 999998765 5688999999999999999999999999999999999999999999986 999999993 223333456
Q ss_pred EEeeceeeeEeeeeEEe--eeeeeeecCCCceeeeeeeeEeecchhhhhcccCchhhhhcc
Q 009748 438 VALSGITYERVKGTYTV--KPVHFACSDSLPCVDVTLSVIELKPVQERYHMYDPYCWQAFG 496 (527)
Q Consensus 438 ~~i~nItf~NI~gt~~~--~pi~i~c~~~~~~~~I~f~nV~v~~~~~~~~~~~~~c~~v~g 496 (527)
+.|+||+|+||+++... .++.|.|+ ..+|+||+|+||+|++.+ ....|+|+..
T Consensus 281 ~~i~ni~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~~-----~~~~C~n~~~ 335 (339)
T 1ia5_A 281 VPITDFVLDNVHGSVVSSGTNILISCG-SGSCSDWTWTDVSVSGGK-----TSSKCTNVPS 335 (339)
T ss_dssp SCEEEEEEEEEEEEECTTSEEEEEECC-TTCEEEEEEEEEEEESSB-----CCSCCBSCCT
T ss_pred ceEEEEEEEeEEEEeCCCCEEEEEEeC-CCCEecEEEEeEEEECCC-----CCeeeECCCC
Confidence 89999999999999765 68999996 889999999999998643 2357999885
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=5.5e-55 Score=451.49 Aligned_cols=298 Identities=23% Similarity=0.357 Sum_probs=259.7
Q ss_pred hHHHHHHHHhcccceeeeEEecCceeEEEeeeccccccccceEEEEecceEEccCCCcccccceeeeEEeeeeeceEEee
Q 009748 126 TKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDWGKGLLWWLDFTKLKGITIQG 205 (527)
Q Consensus 126 t~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~l~l~g~~~~sni~l~~~Gtl~~~~~~~~~~~~~~~~i~~~~~~nI~I~G 205 (527)
++|||+ +++|...++++|+||+| +|+ .|.| +++++|+++|++.+. ...|.+ +||.+. .+||+|+|
T Consensus 8 ~~aiq~-i~aC~~~gg~~v~vP~G-~~l--~l~l-----~~~~~l~~~g~~~~~--~~~w~~---~~i~~~-~~ni~I~G 72 (335)
T 1k5c_A 8 VDDAKD-IAGCSAVTLNGFTVPAG-NTL--VLNP-----DKGATVTMAGDITFA--KTTLDG---PLFTID-GTGINFVG 72 (335)
T ss_dssp TTGGGG-CTTCSEEEECCEEECTT-CCE--EECC-----CTTCEEEECSCEEEC--CCCSCS---CSEEEE-EEEEEEEC
T ss_pred HHHhHH-HHhcccCCCCEEEECCC-EEE--EEEe-----CCCeEEEEeccEecc--cccccC---cEEEEE-ccCEEEEe
Confidence 789999 87666667899999999 565 3444 789999999999873 356753 578875 69999999
Q ss_pred -ceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcceEEEeeeeeEEEEEEEEecCC
Q 009748 206 -KGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSP 284 (527)
Q Consensus 206 -~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~ 284 (527)
.|+|||+|+.||..... +....||++|+|.+|+ ++|+||+++|++
T Consensus 73 ~~G~idG~G~~ww~~~~~---------------------------------~~~~~rP~~i~~~~~~-v~i~giti~nsp 118 (335)
T 1k5c_A 73 ADHIFDGNGALYWDGKGT---------------------------------NNGTHKPHPFLKIKGS-GTYKKFEVLNSP 118 (335)
T ss_dssp TTCEEECCGGGTCCSCTT---------------------------------TSSSCCCCCSEEEEEE-EEEESCEEESCS
T ss_pred CccEEcCChhHhhhcccc---------------------------------cCCCCCCeEEEEeceE-EEEEEEEEECCC
Confidence 69999999999986210 1123589999999999 999999999999
Q ss_pred cceeeecceeE-EEEEEeeecCCC-C----CCCCCceeeecccceEEEecccccCCceeEeccCCceeEEeeeccCCCCc
Q 009748 285 QCHLKFDNCIG-VVVHDVSVSSPG-D----SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHG 358 (527)
Q Consensus 285 ~~~i~~~~c~n-V~I~nv~I~s~~-~----~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~I~n~~~~~g~G 358 (527)
+|++++..|+| |+|+|++|.++. + ++|+||||+ +|+||+|+||+|.++||||+++++ +||+|+||+|.++||
T Consensus 119 ~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghG 196 (335)
T 1k5c_A 119 AQAISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHG 196 (335)
T ss_dssp SCCEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCC
T ss_pred cceEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCcc
Confidence 99999999999 999999999974 3 799999999 999999999999999999999996 999999999999999
Q ss_pred ccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCc-ceeeeEEeeeeEeeeee-ecEEEeeeeecCCccccccc
Q 009748 359 ISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGS-GSVQGVLFSNIQVSEVQ-LPIVIDQFYCDKSTCKNQTS 436 (527)
Q Consensus 359 I~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~-G~V~NI~f~Ni~v~~v~-~pi~I~~~y~~~~~~~~~~~ 436 (527)
|+|||+++ .+.|+||+|+||+|.++.+|+|||+|+++. |.|+||+|+||+|+++. +||.|++.|.. .+..+.+
T Consensus 197 isIGS~g~---~~~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~--~~~~p~~ 271 (335)
T 1k5c_A 197 ISIGSIAT---GKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPD--DVGNPGT 271 (335)
T ss_dssp EEEEEECT---TCEEEEEEEESCEEEEEEEEEEEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETS--SSSSCCS
T ss_pred CeEeeccC---CCCEEEEEEEeeEEECCCceEEEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCC--CCCCCCC
Confidence 99999963 578999999999999999999999999988 99999999999999997 79999999932 2333345
Q ss_pred eEEeeceeeeEee--eeEE--eeeeeeeecCCCceeeeeeeeEeecchh
Q 009748 437 AVALSGITYERVK--GTYT--VKPVHFACSDSLPCVDVTLSVIELKPVQ 481 (527)
Q Consensus 437 ~~~i~nItf~NI~--gt~~--~~pi~i~c~~~~~~~~I~f~nV~v~~~~ 481 (527)
++.|+||+|+||+ |+.. ..++.|.|++ +|+||+|+||+|++.+
T Consensus 272 ~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~--~c~ni~~~nv~i~~~~ 318 (335)
T 1k5c_A 272 GAPFSDVNFTGGATTIKVNNAATRVTVECGN--CSGNWNWSQLTVTGGK 318 (335)
T ss_dssp SSCEEEEEECSSCEEEEECTTCEEEEEECSS--EESEEEEEEEEEESSB
T ss_pred CceEEEEEEEEEEEeeEEcCCceEEEEECCC--cCCCEEEEeEEEEcCC
Confidence 6899999999999 7754 3589999986 9999999999998866
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=3.8e-49 Score=426.21 Aligned_cols=293 Identities=15% Similarity=0.081 Sum_probs=249.0
Q ss_pred CcceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEE------------eeeccccccccceEEEEecc
Q 009748 107 SSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLV------------GPMSFSGPYCQANIIFQLDG 174 (527)
Q Consensus 107 ~~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~------------~~l~l~g~~~~sni~l~~~G 174 (527)
.++|||++|||++| ||+|||+||++|++.++++|+||+|++|++ ++|.| +++++|+++|
T Consensus 49 ~~~~nV~dfGA~gD----dT~AIqkAIdaCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L-----kSnVtL~LdG 119 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD----SRQYLQAAIDYVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL-----RSNVNLNIEG 119 (600)
T ss_dssp CTTSCBCCCCTTCC----CHHHHHHHHHHHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEEC-----CTTEEEEECS
T ss_pred CcEEeeecCCCCcc----CHHHHHHHHHHhhhcCCCEEEECCCCEEEecccccccccccccceEE-----cCceEEeeec
Confidence 46899999999998 999999999987777889999999978999 88988 7899999999
Q ss_pred eEEccCCCcccccc---eeee---EEeeeeeceEEeeceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCc
Q 009748 175 TIIAPTGSKDWGKG---LLWW---LDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTP 248 (527)
Q Consensus 175 tl~~~~~~~~~~~~---~~~~---i~~~~~~nI~I~G~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (527)
+|+++.+..+|+.. ...| |.+.+++||+|+|.|+|||+|+.||...
T Consensus 120 tL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~---------------------------- 171 (600)
T 2x6w_A 120 RIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASS---------------------------- 171 (600)
T ss_dssp EEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTT----------------------------
T ss_pred EEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCcccccccc----------------------------
Confidence 99999999999642 2345 8899999999999999999999999641
Q ss_pred ccccccCCCCCCCcceEEEeeeeeEEEEEEEEecC-Ccceeee---cceeEEEEEEee----ecCCCCCCCCCceeeecc
Q 009748 249 IRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNS-PQCHLKF---DNCIGVVVHDVS----VSSPGDSPNTDGIHLQNS 320 (527)
Q Consensus 249 ~~~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns-~~~~i~~---~~c~nV~I~nv~----I~s~~~~~ntDGI~i~~s 320 (527)
..+..||+ ++|.+|+ |+||+++|+ |+|++++ ..|+||+|+|++ |.+ ++|+|||
T Consensus 172 -------~~~~~RP~-l~f~~c~---I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI----- 232 (600)
T 2x6w_A 172 -------QLRNGVAF-GRSYNCS---VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS----- 232 (600)
T ss_dssp -------CCEEEEEC-CSEEEEE---EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-----
T ss_pred -------ccCCCCCE-EEEeeeE---EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-----
Confidence 00113787 8899998 999999999 9999999 999999999999 877 6899999
Q ss_pred cceEEEecccccCCceeEe-ccCCc-eeEEeeeccCCCC-cccccccCCCCccceeeceeEeeeeeecceeeeEEeeecc
Q 009748 321 KDVLIHTSNLACGDDCVSI-QTGCS-NVYVHNVNCGPGH-GISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQG 397 (527)
Q Consensus 321 ~nV~I~n~~i~~gDD~Iai-~sgs~-NV~I~n~~~~~g~-GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g 397 (527)
|+|+||+|.++||||++ |+++. ++.++ .|..+| ||+|||+ +.+.|+||+|+| +||++.|
T Consensus 233 --V~I~nc~I~tGDDCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe----~~ggV~NV~V~N----------rIKt~~G 294 (600)
T 2x6w_A 233 --TVYVNCPYSGVESCYFSMSSSFARNIACS--VQLHQHDTFYRGST----VNGYCRGAYVVM----------HAAEAAG 294 (600)
T ss_dssp --EEEECSSSEEEESCEEECCCTTHHHHEEE--EEECSSSEEEESCE----EEEESEEEEEEE----------CGGGCTT
T ss_pred --EEEEeeEEecCCcEEEEecCCCcCCeEEE--EEcCCCCcEEeccc----ccCcEEEEEEEE----------EEEeecC
Confidence 99999999999999999 99864 57777 566777 8999997 567899999999 6677778
Q ss_pred CcceeeeEEeeeeEeeeeeecEEEeeeeecCCccccccceEEeeceeeeEeeeeEEeee-------eeeeecC-------
Q 009748 398 GSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYTVKP-------VHFACSD------- 463 (527)
Q Consensus 398 ~~G~V~NI~f~Ni~v~~v~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~~~p-------i~i~c~~------- 463 (527)
+.|.|+||+|+||+|+++.++|.+++.. ...+.+.|+||+|+||+++....+ ..+.+.+
T Consensus 295 ~GG~V~NItfeNI~m~nV~~~I~i~q~~-------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~ 367 (600)
T 2x6w_A 295 AGSYAYNMQVENNIAVIYGQFVILGSDV-------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASN 367 (600)
T ss_dssp TCSEEEEEEEESCEEEESSEEEEEEECB-------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSS
T ss_pred CCceEEEEEEEEEEEEccceEEEeCCCC-------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCccccccc
Confidence 8899999999999999999888887641 234567999999999999964321 3444433
Q ss_pred CCceeeeeeeeEeecch
Q 009748 464 SLPCVDVTLSVIELKPV 480 (527)
Q Consensus 464 ~~~~~~I~f~nV~v~~~ 480 (527)
..++++|+|+|+.+...
T Consensus 368 ~~~Ie~V~~~~~~~~~~ 384 (600)
T 2x6w_A 368 VQDIQRVLVTGNSFYAP 384 (600)
T ss_dssp SCCEEEEEEESCEEECC
T ss_pred ccceeEEEEeceEEEcC
Confidence 36899999999999553
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=3.1e-41 Score=368.48 Aligned_cols=306 Identities=16% Similarity=0.205 Sum_probs=240.4
Q ss_pred ceeeecccccCCCCCcchHHHHHHHHhccc--------------------------ceeeeEEecCceeEEE---eeecc
Q 009748 109 VFNVKDFGAKGNGVSDDTKAFEAAWAAACK--------------------------VEASIMVVPAESVFLV---GPMSF 159 (527)
Q Consensus 109 ~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~--------------------------~gg~~V~iP~G~~yl~---~~l~l 159 (527)
.||...|||++||.+|++++|. +|+.++. .++++|+||+| +|++ |+|.|
T Consensus 142 ~~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G-~yl~g~~G~i~l 219 (549)
T 1x0c_A 142 EFDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPG-VYYFTGHDHMVL 219 (549)
T ss_dssp EEGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSE-EEECCTTCCEEE
T ss_pred EECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCe-EEecCCceEEEe
Confidence 4555679999999999999987 5555543 35889999999 8986 58888
Q ss_pred ccccccceEE-EEec-ceEEccCCCcccccceeeeEEee-eeeceEEeeceEeeCCceeeeecCCCCCCCCCCccEeEec
Q 009748 160 SGPYCQANII-FQLD-GTIIAPTGSKDWGKGLLWWLDFT-KLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPL 236 (527)
Q Consensus 160 ~g~~~~sni~-l~~~-Gtl~~~~~~~~~~~~~~~~i~~~-~~~nI~I~G~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~ 236 (527)
+++++ |+++ |+.+.. ++.+. +++||+|+|.|+|||+|..||.... +
T Consensus 220 -----~s~~~~L~l~~GA~L~g------------s~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~-------~------- 268 (549)
T 1x0c_A 220 -----SSSVTWVYFAPGAYVKG------------AVEFLSTASEVKASGHGVLSGEQYVWYADPD-------E------- 268 (549)
T ss_dssp -----CTTCCEEEECTTEEEES------------CEEECCCSSEEEEESSCEEECTTSCTTEEGG-------G-------
T ss_pred -----cCCCCeEecCCCCEEEE------------EEEEecCceeEEEEeeEEEECCCceecccCc-------c-------
Confidence 78999 9998 764431 23344 8999999999999999999996410 0
Q ss_pred CCCCCCCCCCCcccccccCCCCCCCcceEEE------eeeeeEEEEEEEEecCCcceeeec-ce-eE--EEEEEeeecCC
Q 009748 237 HNNTLPYKPPTPIRSELSGKMPSIKPTALRF------YGSFNVTVTGITIQNSPQCHLKFD-NC-IG--VVVHDVSVSSP 306 (527)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~------~~~~nv~I~giti~ns~~~~i~~~-~c-~n--V~I~nv~I~s~ 306 (527)
.+. .....||++|.| .+|+|++|+|++++|+++|++++. .| ++ |+|+|+++.++
T Consensus 269 ---------------~~~-~~~~~rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~ 332 (549)
T 1x0c_A 269 ---------------GYQ-KASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGA 332 (549)
T ss_dssp ---------------TTE-ECGGGCSCCCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECC
T ss_pred ---------------ccc-ccccCCCceEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcC
Confidence 000 001136778888 999999999999999999999965 56 69 99999999875
Q ss_pred CCCCCCCceeeecccceEEEecccccCCceeEeccCCceeEEeeeccCC--CCc-ccccccCCCCccceeeceeEeeeee
Q 009748 307 GDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGP--GHG-ISIGSLGKDNTKACVSNITVRDVMM 383 (527)
Q Consensus 307 ~~~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~I~n~~~~~--g~G-I~IGs~g~~~~~~~v~nI~v~Ni~i 383 (527)
. .+|+|||++. +||+|+||+|.++||||++++ +||+|+||+|+. +++ |+||+. .+.|+||+|+||+|
T Consensus 333 ~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaIks--~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i 402 (549)
T 1x0c_A 333 F-YGQTDGLEMY--PGTILQDVFYHTDDDGLKMYY--SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDV 402 (549)
T ss_dssp C-BTTCCCCBCC--TTCEEEEEEEEESSCCEECCS--SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEE
T ss_pred C-CCCCCccccc--CCEEEEeeEEeCCCCEEEECC--CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEE
Confidence 3 4689999999 999999999999999999998 999999999965 567 999984 47799999999999
Q ss_pred eccee------eeEEee---ec-c------C-cceeeeEEeeeeEeeeee-ecEEEeeeeecCCccccccceEEeeceee
Q 009748 384 HNTMN------GVRIKT---WQ-G------G-SGSVQGVLFSNIQVSEVQ-LPIVIDQFYCDKSTCKNQTSAVALSGITY 445 (527)
Q Consensus 384 ~~~~~------Gi~Ikt---~~-g------~-~G~V~NI~f~Ni~v~~v~-~pi~I~~~y~~~~~~~~~~~~~~i~nItf 445 (527)
.++.+ |..|++ |. + + .|.|+||+|+||+|+++. +++.+.+.+. .+...|+||+|
T Consensus 403 ~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g--------~pg~~I~nI~i 474 (549)
T 1x0c_A 403 IHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRI--------NPIQNLDNISI 474 (549)
T ss_dssp EECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEE--------CCSEEEEEEEE
T ss_pred ECccccccccceEEEecccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecC--------CCCCcCccEEE
Confidence 98763 555876 21 2 2 679999999999999997 7766654421 12346999999
Q ss_pred eEeeeeEEe-----e-eeeeeec------CCCceeeeeeeeEeecchh
Q 009748 446 ERVKGTYTV-----K-PVHFACS------DSLPCVDVTLSVIELKPVQ 481 (527)
Q Consensus 446 ~NI~gt~~~-----~-pi~i~c~------~~~~~~~I~f~nV~v~~~~ 481 (527)
+||+++... . +..+.+. ...+|+||+|+||+|+++.
T Consensus 475 ~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~~v~nI~f~NV~i~G~~ 522 (549)
T 1x0c_A 475 KNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNTT 522 (549)
T ss_dssp EEEEEEEECCGGGTCSCEEECCCBBTTTCCBCCEEEEEEEEEEETTEE
T ss_pred EEEEEEccccccccccceEEeCCCccccccceeeeeEEEEeEEEeCeE
Confidence 999977553 1 2333332 2378999999999998875
No 13
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=7.9e-39 Score=349.60 Aligned_cols=272 Identities=15% Similarity=0.168 Sum_probs=211.8
Q ss_pred ceeeeEEecCceeEEEeeeccccccc---------cceEE-EEec-ceEEccCCCcccccceeeeEEeeeeeceEEeece
Q 009748 139 VEASIMVVPAESVFLVGPMSFSGPYC---------QANII-FQLD-GTIIAPTGSKDWGKGLLWWLDFTKLKGITIQGKG 207 (527)
Q Consensus 139 ~gg~~V~iP~G~~yl~~~l~l~g~~~---------~sni~-l~~~-Gtl~~~~~~~~~~~~~~~~i~~~~~~nI~I~G~G 207 (527)
.|+++||||+| +|+++++.|.|| | +++++ |+|+ |+.+ ..||.+.+++||+|+|.|
T Consensus 229 ~ggg~v~vP~G-~yl~~~~~~~gp-c~~g~G~i~lkSnvt~L~L~~GA~l------------~g~i~~~~~~nv~ItG~G 294 (574)
T 1ogo_X 229 GAKSILYFPPG-VYWMNQDQSGNS-GKLGSNHIRLNSNTYWVYLAPGAYV------------KGAIEYFTKQNFYATGHG 294 (574)
T ss_dssp CSSSEEEECSE-EEEECBCTTCCB-SCSSSCCEECCTTCCEEEECTTEEE------------ESCEEECCSSCEEEESSC
T ss_pred CCCCEEEECCc-EEEEeccccCCc-ccccceEEEecCCCceEEecCCcEE------------EccEEEeCceeEEEEeCE
Confidence 47899999999 999944444332 1 55666 6665 5433 235888999999999999
Q ss_pred EeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcceEEEe------eeeeEEEEEEEEe
Q 009748 208 IIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFY------GSFNVTVTGITIQ 281 (527)
Q Consensus 208 ~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~------~~~nv~I~giti~ 281 (527)
+|||+|..||.... . .+. . ...||++++|. +|+||+|+|++++
T Consensus 295 tIDG~G~~ww~~~~---~--------------------------~~~-~-~~~rp~~i~~~~~~~~~~c~NV~I~Giti~ 343 (574)
T 1ogo_X 295 ILSGENYVYQANAG---D--------------------------NYI-A-VKSDSTSLRMWWHNNLGGGQTWYCVGPTIN 343 (574)
T ss_dssp EEECTTSCTTCBTT---T--------------------------TTB-S-CCCTTTBCCSEEECSCCSSEEEEEESCEEE
T ss_pred EEeCCCcccccccc---c--------------------------ccc-c-ccCCcceEEEEeccccCCceeEEEECeEEE
Confidence 99999999997510 0 000 0 11378888888 9999999999999
Q ss_pred cCCcceeeecceeEE--EEEEeeecCCCCCCCCCceeeecccceEEEecccccCCceeEeccCCceeEEeeeccCC--CC
Q 009748 282 NSPQCHLKFDNCIGV--VVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGP--GH 357 (527)
Q Consensus 282 ns~~~~i~~~~c~nV--~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~I~n~~~~~--g~ 357 (527)
|+++|++++..|++| +|+|+++.++. ..++||||+. +||+|+||+|.++||||++++ +||+|+||+|.. +|
T Consensus 344 NSp~w~i~~~~c~nV~~~I~nv~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~ 418 (574)
T 1ogo_X 344 APPFNTMDFNGNSGISSQISDYKQVGAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHND 418 (574)
T ss_dssp CCSSCSEEECSSSCEEEEEEEEEEECCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSS
T ss_pred CCCCcEEeecCCCChhhEEEeeEeeCCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCC
Confidence 999999999999999 99999988642 3469999999 999999999999999999998 999999999765 56
Q ss_pred c-ccccccCCCCccceeeceeEeeeeeecceee--------eEE----------eeeccCcceeeeEEeeeeEeeeeeec
Q 009748 358 G-ISIGSLGKDNTKACVSNITVRDVMMHNTMNG--------VRI----------KTWQGGSGSVQGVLFSNIQVSEVQLP 418 (527)
Q Consensus 358 G-I~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~G--------i~I----------kt~~g~~G~V~NI~f~Ni~v~~v~~p 418 (527)
| |+|||. .+.|+||+|+||+|.++..+ ..| +.. .+.| | ||+|+||+++++.++
T Consensus 419 g~IsIGS~-----~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~-~g~g-V-NI~f~NI~~~~v~~~ 490 (574)
T 1ogo_X 419 PIIQMGWT-----SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPD-SRKS-I-SMTVSNVVCEGLCPS 490 (574)
T ss_dssp CSEECCSS-----CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCE-EEEE-E-EEEEEEEEECSSBCE
T ss_pred ceEEEcCC-----CCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccC-CCce-E-EEEEEeEEEEceeEe
Confidence 6 999983 57899999999999987542 222 222 2334 8 999999999999888
Q ss_pred EEEeeeeecCCccccccceEEeeceeeeEeeeeE------Ee-eeeeeeecCCCceeeeeeeeEeecchh
Q 009748 419 IVIDQFYCDKSTCKNQTSAVALSGITYERVKGTY------TV-KPVHFACSDSLPCVDVTLSVIELKPVQ 481 (527)
Q Consensus 419 i~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~------~~-~pi~i~c~~~~~~~~I~f~nV~v~~~~ 481 (527)
+ |.. + +...|+||+|+||+++. .. .+..+.+.+ .+|+||+|+||+|.++.
T Consensus 491 i-i~i-~----------p~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g~~ 547 (574)
T 1ogo_X 491 L-FRI-T----------PLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGGQK 547 (574)
T ss_dssp E-EEE-C----------CSEEEEEEEEEEEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETTEE
T ss_pred e-EEE-C----------CCCCEEEEEEEeEEEeCccccccccccceeEecCC-CccceEEEEeEEEeCEE
Confidence 5 332 1 23479999999999653 11 233455555 89999999999998765
No 14
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=7.8e-38 Score=334.63 Aligned_cols=295 Identities=15% Similarity=0.202 Sum_probs=219.2
Q ss_pred CCccee-eecccccCCCCCcchHHHHHHHHhcccc-eeeeEEecCceeEEEeeeccccccccceEEEEec--ceEEccCC
Q 009748 106 HSSVFN-VKDFGAKGNGVSDDTKAFEAAWAAACKV-EASIMVVPAESVFLVGPMSFSGPYCQANIIFQLD--GTIIAPTG 181 (527)
Q Consensus 106 ~~~~~~-V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~-gg~~V~iP~G~~yl~~~l~l~g~~~~sni~l~~~--Gtl~~~~~ 181 (527)
+.++|+ |++|||++||++|||+|||+||++|++. ++++|+||+| +|++++|.| +++++|+++ ++|+++.+
T Consensus 18 ~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~~~~ggg~V~vP~G-tYl~g~I~l-----ks~v~L~l~~GatL~~s~~ 91 (464)
T 1h80_A 18 QDVNYDLVDDFGANGNDTSDDSNALQRAINAISRKPNGGTLLIPNG-TYHFLGIQM-----KSNVHIRVESDVIIKPTWN 91 (464)
T ss_dssp CSEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHHTSTTCEEEEECSS-EEEECSEEC-----CTTEEEEECTTCEEEECCC
T ss_pred CcceeeehhccCcCCCCCchhHHHHHHHHHHHhhccCCcEEEECCC-eEEEeeEec-----cCceEEEEcCCcEEEeccC
Confidence 346899 9999999999999999999999987666 7899999999 899999999 789999998 46777653
Q ss_pred --CcccccceeeeEE---eeeeeceEEeece---EeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccc
Q 009748 182 --SKDWGKGLLWWLD---FTKLKGITIQGKG---IIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSEL 253 (527)
Q Consensus 182 --~~~~~~~~~~~i~---~~~~~nI~I~G~G---~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (527)
...|+ ++. +.+++||+|+|.| +|||+|..
T Consensus 92 td~~~y~-----~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~-------------------------------------- 128 (464)
T 1h80_A 92 GDGKNHR-----LFEVGVNNIVRNFSFQGLGNGFLVDFKDSR-------------------------------------- 128 (464)
T ss_dssp TTCSCEE-----EEEESSSSCEEEEEEEECTTCEEEECTTCS--------------------------------------
T ss_pred CCcccCC-----ceEeecccCccceEEECcCcceEEeCCCCC--------------------------------------
Confidence 44442 333 3789999999998 88877631
Q ss_pred cCCCCCCCcceEEEeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccC
Q 009748 254 SGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACG 333 (527)
Q Consensus 254 ~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~g 333 (527)
..+|++|.|.+|+|++|+||+++| .|.++ .|.+|.+. |+|||++ .|+||+|+||+|.++
T Consensus 129 -----~~rp~~i~~~~~~Nv~I~gIti~n--~w~ih--~s~~V~i~-----------NtDGi~i-~s~nV~I~n~~I~~g 187 (464)
T 1h80_A 129 -----DKNLAVFKLGDVRNYKISNFTIDD--NKTIF--ASILVDVT-----------ERNGRLH-WSRNGIIERIKQNNA 187 (464)
T ss_dssp -----CCBEEEEEECSEEEEEEEEEEEEC--CSCBS--CSEEECEE-----------EETTEEE-EEEEEEEEEEEEESC
T ss_pred -----CCCceEEEEEeeccEEEeeeEEec--cceEe--eceeeeee-----------cCCCcee-eccCEEEeceEEecC
Confidence 137889999999999999999999 56544 45444321 6899999 789999999999999
Q ss_pred CceeEe--ccCCceeEEeeeccCCCCcccccccC---CCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEee
Q 009748 334 DDCVSI--QTGCSNVYVHNVNCGPGHGISIGSLG---KDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFS 408 (527)
Q Consensus 334 DD~Iai--~sgs~NV~I~n~~~~~g~GI~IGs~g---~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~ 408 (527)
|||+.+ ..+++||+|+||+|.+++||+|.+.+ .....+.++||+|+||+|.+..++++|++.. +.++||+|+
T Consensus 188 ddgiGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~~---~~isnItfe 264 (464)
T 1h80_A 188 LFGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPHF---MKNGDVQVT 264 (464)
T ss_dssp CTTCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEECTT---CBCCCEEEE
T ss_pred CCeEEecccCCEeEEEEEeeEEECCCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEeCCC---ceEeEEEEE
Confidence 998852 34589999999999887788776530 0113568999999999999999999999532 479999999
Q ss_pred eeEeeeeeecEEEeeeeecCCccccccceEEeeceeeeEee------eeE---------E-eeeeeeeec----------
Q 009748 409 NIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSGITYERVK------GTY---------T-VKPVHFACS---------- 462 (527)
Q Consensus 409 Ni~v~~v~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~------gt~---------~-~~pi~i~c~---------- 462 (527)
||+++++.++|.|++.|++... ...-...+.+|+|-. |+. . ..|+.+.|.
T Consensus 265 NI~~t~~~~aI~i~q~y~~~fd----~~~~~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~ 340 (464)
T 1h80_A 265 NVSSVSCGSAVRSDSGFVELFS----PTDEVHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLE 340 (464)
T ss_dssp EEEEESSSCSEEECCCCCEECC-------------------------CCBCCC----------CEEBCSCHHHHHHHHHH
T ss_pred EEEEEccceeEEEecCcccccC----ccccccccceeccccccccccCceeEEEeccCCcccCceEEccccceecccccc
Confidence 9999999999999998876421 111245666665543 221 0 135666665
Q ss_pred ---CCCceeeeeeeeEee
Q 009748 463 ---DSLPCVDVTLSVIEL 477 (527)
Q Consensus 463 ---~~~~~~~I~f~nV~v 477 (527)
.....++++++||++
T Consensus 341 ~~~~~g~~~~~~~~nv~~ 358 (464)
T 1h80_A 341 YGIEPGSFGTVKVFDVTA 358 (464)
T ss_dssp TCCCCCBCSSEEEEEEEE
T ss_pred ccccCCceEEEEEEEEEe
Confidence 344556677777766
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=2.1e-37 Score=336.29 Aligned_cols=236 Identities=19% Similarity=0.236 Sum_probs=190.0
Q ss_pred cceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEE-eeeccccccccceEEEEecc----eEEccCCC
Q 009748 108 SVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLV-GPMSFSGPYCQANIIFQLDG----TIIAPTGS 182 (527)
Q Consensus 108 ~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~-~~l~l~g~~~~sni~l~~~G----tl~~~~~~ 182 (527)
+++||++|||++||++|||+|||+||++ |++|+||+| +|++ ++|.| +++++|+++| +|.++.+.
T Consensus 21 ~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-----Gg~V~iP~G-tYlis~~l~l-----~snv~L~g~g~~~t~L~~~~~~ 89 (609)
T 3gq8_A 21 FGVSVKTYGAKGDGVTDDIRAFEKAIES-----GFPVYVPYG-TFMVSRGIKL-----PSNTVLTGAGKRNAVIRFMDSV 89 (609)
T ss_dssp SSEEGGGGTCCCEEEEECHHHHHHHHHT-----SSCEEECSE-EEEESSCEEE-----CSSEEEEESCTTTEEEEECTTC
T ss_pred cEEEeEecccCCCCCchhHHHHHHHHHc-----CCEEEECCc-cEEEeCceEE-----CCCcEEEEeeCCCCEEEeCCCC
Confidence 6899999999999999999999999985 389999999 8999 99999 6789999885 56666554
Q ss_pred cccccceeeeEEeeeeeceEEeeceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCc
Q 009748 183 KDWGKGLLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKP 262 (527)
Q Consensus 183 ~~~~~~~~~~i~~~~~~nI~I~G~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP 262 (527)
..|......|+.+.+++||+|+|. +|||+|+.||.. + + .....||
T Consensus 90 p~~~~li~~lI~a~~~~NItItG~-TIDGNG~~~g~~-~---------~------------------------~~g~~RP 134 (609)
T 3gq8_A 90 GRGESLMYNENVTTGNENIFLSSF-TLDGNNKRLGQG-I---------S------------------------GIGGSRE 134 (609)
T ss_dssp CSSCCSEEESCTTTCCEEEEEEEE-EEECCGGGGCSS-C---------C------------------------CSSTTTT
T ss_pred CCCCceeeeeeeecccccEEEEee-EEECCccccCcc-c---------c------------------------cCCCCCc
Confidence 444333345678889999999996 999999833321 0 0 0112589
Q ss_pred ceEEEeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeec------ccceEEEeccc-ccCCc
Q 009748 263 TALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQN------SKDVLIHTSNL-ACGDD 335 (527)
Q Consensus 263 ~~i~~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~------s~nV~I~n~~i-~~gDD 335 (527)
++|.|.+|+|++|+|++++|++.+++. |.++.+ | ||+++++ |+||+|+||+| .++||
T Consensus 135 ~lI~f~~c~NV~I~gVti~NSp~~gI~-------------I~~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDD 198 (609)
T 3gq8_A 135 SNLSIRACHNVYIRDIEAVDCTLHGID-------------ITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDD 198 (609)
T ss_dssp CSEEEESCEEEEEEEEEEESCSSCSEE-------------EECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSC
T ss_pred cEEEEEeeceEEEEeeEEEeCCCCCeE-------------EeCCCC--C-ccccCCCccccccceeEEEEeeEEEecCCC
Confidence 999999999999999999999985443 333322 2 6666666 99999999999 67999
Q ss_pred eeEeccCCceeEEeeeccCC------CCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeee
Q 009748 336 CVSIQTGCSNVYVHNVNCGP------GHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSN 409 (527)
Q Consensus 336 ~Iai~sgs~NV~I~n~~~~~------g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~N 409 (527)
||++++ ++||+|+||+|.. ++||+||+. .+||+|+||++.++.+|++||++. +.+.++||+++|
T Consensus 199 cIaIks-seNI~I~Nc~~~gp~G~S~~~GIsIGsg--------s~NVtV~Nc~i~nt~~GIrIKt~~-~~~~v~NV~I~n 268 (609)
T 3gq8_A 199 GITTHH-SQYINILNCYSHDPRLTANCNGFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISING 268 (609)
T ss_dssp SEEECS-CEEEEEESCEEECCSSCSSCCSEEECTT--------CEEEEEESEEEESSSEEEEEEECT-TSCCCEEEEEEE
T ss_pred EEEecC-CeeEEEEeEEEECCCCCCCcccEEccCC--------cccEEEEeeEEECCCCEEEEEecC-CCCccccEEEEC
Confidence 999987 8999999999933 478999842 399999999999999999999875 457899999998
Q ss_pred -eEeeee
Q 009748 410 -IQVSEV 415 (527)
Q Consensus 410 -i~v~~v 415 (527)
+.++++
T Consensus 269 ~vs~~nv 275 (609)
T 3gq8_A 269 HMSVEDV 275 (609)
T ss_dssp EEEESCS
T ss_pred CEeecCc
Confidence 455554
No 16
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=5.4e-37 Score=337.70 Aligned_cols=236 Identities=19% Similarity=0.241 Sum_probs=190.6
Q ss_pred cceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEE-eeeccccccccceEEEEecc----eEEccCCC
Q 009748 108 SVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLV-GPMSFSGPYCQANIIFQLDG----TIIAPTGS 182 (527)
Q Consensus 108 ~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~-~~l~l~g~~~~sni~l~~~G----tl~~~~~~ 182 (527)
+++||++|||+|||++|||+|||+||++ | ++|+||+| +|++ ++|.| +++++|.++| +|.++.+.
T Consensus 21 ~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a----G-g~V~IPaG-tYlisg~I~L-----~snv~L~Geg~~~t~Lk~~~d~ 89 (772)
T 3gqn_A 21 FGVSVKTYGAKGDGVTDDIRAFEKAIES----G-FPVYVPYG-TFMVSRGIKL-----PSNTVLTGAGKRNAVIRFMDSV 89 (772)
T ss_dssp SSEESGGGTCCCEEEEECHHHHHHHHHT----T-SCEEECSE-EEEESSCEEE-----CSSCEEEEEEEEEEEEEECTTC
T ss_pred cEEEeEecccCCCCChhHHHHHHHHHHc----C-CEEEECCc-cEEEEeEEEE-----CCCcEEEEecCCCCEEEeCCCC
Confidence 5899999999999999999999999985 3 89999999 8999 99999 6788898875 46666554
Q ss_pred cccccceeeeEEeeeeeceEEeeceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCc
Q 009748 183 KDWGKGLLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKP 262 (527)
Q Consensus 183 ~~~~~~~~~~i~~~~~~nI~I~G~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP 262 (527)
..|......|+.+.+++||+|+|. +|||+|+ ||.... + .....||
T Consensus 90 p~~~~li~~lI~a~gveNItItG~-TIDGNG~-~~g~~~---------~------------------------~~g~~RP 134 (772)
T 3gqn_A 90 GRGESLMYNENVTTGNENIFLSSF-TLDGNNK-RLGQGI---------S------------------------GIGGSRE 134 (772)
T ss_dssp CSSCCSEEESCTTTCCEEEEEEEE-EEECCGG-GGCSSC---------C------------------------CSSTTTT
T ss_pred CCCCceeeeeeeccCceeEEEEee-EEeCCcc-ccCccc---------c------------------------cCCCCCc
Confidence 444333446778899999999996 9999998 433200 0 0112589
Q ss_pred ceEEEeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeec------ccceEEEeccc-ccCCc
Q 009748 263 TALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQN------SKDVLIHTSNL-ACGDD 335 (527)
Q Consensus 263 ~~i~~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~------s~nV~I~n~~i-~~gDD 335 (527)
++|.|.+|+|++|+|++++|++.+++ +|.++.+ | ||+++++ |+||+|+||+| .++||
T Consensus 135 ~lI~f~~ckNV~I~gVti~NSp~~gI-------------~I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDD 198 (772)
T 3gqn_A 135 SNLSIRACHNVYIRDIEAVDCTLHGI-------------DITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDD 198 (772)
T ss_dssp CSEEEESCEEEEEEEEEEESCSSCSE-------------EEECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSC
T ss_pred cEEEEEeeceEEEEeEEEEeCCCCCE-------------EEeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcC
Confidence 99999999999999999999998543 3444432 3 6666666 99999999999 56999
Q ss_pred eeEeccCCceeEEeeeccCC------CCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeee
Q 009748 336 CVSIQTGCSNVYVHNVNCGP------GHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSN 409 (527)
Q Consensus 336 ~Iai~sgs~NV~I~n~~~~~------g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~N 409 (527)
||++++ ++||+|+||+|.. ++||+||+. .+||+|+||++.++.+|++||++ ++.+.++||.++|
T Consensus 199 cIAIks-SeNI~I~Nc~c~gphG~S~~~GIsIGsg--------s~NVtV~Nc~~~nT~nGIRIKt~-~~gg~v~NV~I~g 268 (772)
T 3gqn_A 199 GITTHH-SQYINILNCYSHDPRLTANCNGFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAH-GDAPAAYNISING 268 (772)
T ss_dssp SEEECS-CEEEEEESCEEECCSSSSSCCSEEECTT--------CEEEEEEEEEEESSSEEEEECCC-TTSCCCEEEEEEE
T ss_pred eEEecC-CceEEEEeEEEECCCCCCCcccEEecCC--------cccEEEEceEEECCCcEEEEEEe-CCCCccccEEEEC
Confidence 999987 8999999999933 478999852 39999999999999999999987 4557899999885
Q ss_pred -eEeeee
Q 009748 410 -IQVSEV 415 (527)
Q Consensus 410 -i~v~~v 415 (527)
+.++++
T Consensus 269 nis~~dv 275 (772)
T 3gqn_A 269 HMSVEDV 275 (772)
T ss_dssp EEEESCS
T ss_pred CEEeccC
Confidence 777654
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.97 E-value=4.6e-31 Score=272.44 Aligned_cols=212 Identities=16% Similarity=0.172 Sum_probs=165.3
Q ss_pred CcceeeecccccCCCCCcchHHHHHHHHhcccc-eeeeEEecCce---eEEE-eeeccccccccceEEEEecc--eEEcc
Q 009748 107 SSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKV-EASIMVVPAES---VFLV-GPMSFSGPYCQANIIFQLDG--TIIAP 179 (527)
Q Consensus 107 ~~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~-gg~~V~iP~G~---~yl~-~~l~l~g~~~~sni~l~~~G--tl~~~ 179 (527)
+..+||+||||+|||++|||+|||+||++||+. +|++||||+|. +|++ ++|.| +++++|.+++ +|+++
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~L-----kSnV~L~Ge~~AtIl~s 123 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLI-----PGGVNIRGVGKASQLRA 123 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEE-----CTTEEEECCSTTSEEEE
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEe-----cCCeEEEEecCceEeec
Confidence 468999999999999999999999999999887 78999999994 5766 57887 7899999883 55543
Q ss_pred CCC--c-ccccceeeeEEeeeeeceEEeeceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCC
Q 009748 180 TGS--K-DWGKGLLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGK 256 (527)
Q Consensus 180 ~~~--~-~~~~~~~~~i~~~~~~nI~I~G~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (527)
... . ........|+.+.+++||+|+|+|+|||++..|+....
T Consensus 124 ~~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~----------------------------------- 168 (514)
T 2vbk_A 124 KSGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDS----------------------------------- 168 (514)
T ss_dssp CTTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTTCS-----------------------------------
T ss_pred cccccccEEeccCCccccccCceEEEEECCCeEeCCCCCccccce-----------------------------------
Confidence 221 0 00011235788899999999999999998764422100
Q ss_pred CCCCCcceEEEeeeeeEEEEEEEE--ecCCcceeeecceeEEEEE-EeeecCCCCCCCCCceeeecccceEEEecccccC
Q 009748 257 MPSIKPTALRFYGSFNVTVTGITI--QNSPQCHLKFDNCIGVVVH-DVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACG 333 (527)
Q Consensus 257 ~~~~rP~~i~~~~~~nv~I~giti--~ns~~~~i~~~~c~nV~I~-nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~g 333 (527)
..|+ .....+++|.|++++. .+++.|++++..|++++++ ++++. .+|+||+|.||.|..|
T Consensus 169 --~~Rq--~~~~~fdnV~Vn~Vt~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVG 231 (514)
T 2vbk_A 169 --VIRQ--VYGWVFDNVMVNEVETAYLMQGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRG 231 (514)
T ss_dssp --SCCC--EESEEEESCEEEEEEEEEEEESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECT
T ss_pred --eeec--cceEEeeeEEEEeEEEeEeccCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecC
Confidence 0111 2223478999999965 4788999999999999988 66554 2699999999999999
Q ss_pred CceeEeccC-----------CceeEEeeeccCCCCc-ccccccCCCCccceeec-eeEeeeeeecce
Q 009748 334 DDCVSIQTG-----------CSNVYVHNVNCGPGHG-ISIGSLGKDNTKACVSN-ITVRDVMMHNTM 387 (527)
Q Consensus 334 DD~Iai~sg-----------s~NV~I~n~~~~~g~G-I~IGs~g~~~~~~~v~n-I~v~Ni~i~~~~ 387 (527)
||||++|+| ++||. || +.||||. +.++|+| |+|++|.|.+++
T Consensus 232 DdciaiksGk~~~~~~~~~~se~~~---------hgav~igSE~---m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 232 NYSADESFGIRIQPQTYAWSSEAVR---------SEAIILDSET---MCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp TSCCTTCEEEEEECBCCTTTSSCBC---------CEEEEEESSE---EEESCSEEEEESCCEEEEEE
T ss_pred cceeeeecCceecccccCCcchhcc---------cccEEECchh---hcccccccEEEEeeeccCCc
Confidence 999999996 56655 76 9999983 5678999 999999999874
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=4e-29 Score=261.39 Aligned_cols=300 Identities=21% Similarity=0.291 Sum_probs=197.6
Q ss_pred ceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEEe--------eeccccccccceEEEEecc---eE-
Q 009748 109 VFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVG--------PMSFSGPYCQANIIFQLDG---TI- 176 (527)
Q Consensus 109 ~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~--------~l~l~g~~~~sni~l~~~G---tl- 176 (527)
+|||++|||++||++|||+|||+||++|++.++++|+||+| +|++. +|.+ +++++|+++| ++
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~gg~~v~~p~G-~y~~~~~~~~~~g~l~~-----~~~v~l~g~g~~~t~l 75 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAAGGGTVYLPAG-EYRVSAAGEPGDGCLML-----KDGVYLAGAGMGETVI 75 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHTTSEEEEECSE-EEEECCCSSGGGCSEEC-----CTTEEEEESSBTTEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhcCCCEEEECCe-EEEEcccccCCcccEEe-----cCCeEEEEcCCCCcEE
Confidence 68999999999999999999999999998888899999999 89884 6777 7899999985 44
Q ss_pred EccCCCccccccee--ee---EEeeeeeceEEeec-----eEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCC
Q 009748 177 IAPTGSKDWGKGLL--WW---LDFTKLKGITIQGK-----GIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPP 246 (527)
Q Consensus 177 ~~~~~~~~~~~~~~--~~---i~~~~~~nI~I~G~-----G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (527)
++..+...+..+.. .| ..+..+++++|.|. |+||| ||....
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~------------------------- 126 (377)
T 2pyg_A 76 KLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYI------------------------- 126 (377)
T ss_dssp EECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSC-------------------------
T ss_pred EecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccC-------------------------
Confidence 44443332221100 00 13457899999997 88887 887510
Q ss_pred CcccccccCCCCCCCcceEEEeeeeeEEEEEEEEecCCcceeeeccee-EEEEEEeeecCCC------------------
Q 009748 247 TPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCI-GVVVHDVSVSSPG------------------ 307 (527)
Q Consensus 247 ~~~~~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~c~-nV~I~nv~I~s~~------------------ 307 (527)
| ..+.+|++++|++++++|++.|++++..|. +++++|+.+....
T Consensus 127 ---------------~--~~~~~~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~ 189 (377)
T 2pyg_A 127 ---------------P--GGDGADRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNV 189 (377)
T ss_dssp ---------------T--TSSCCEEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCE
T ss_pred ---------------c--cccccccceEEEeEEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcE
Confidence 0 012469999999999999999999998775 6777777764310
Q ss_pred -CCCCCCceeeec-ccceEEEecccccCCceeEec-------cCCceeEEeeeccCC--CCcccccccCCCCccceeece
Q 009748 308 -DSPNTDGIHLQN-SKDVLIHTSNLACGDDCVSIQ-------TGCSNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNI 376 (527)
Q Consensus 308 -~~~ntDGI~i~~-s~nV~I~n~~i~~gDD~Iai~-------sgs~NV~I~n~~~~~--g~GI~IGs~g~~~~~~~v~nI 376 (527)
...+.|||++.. |++++|+++.+...++|+.+. ..++|++|+++.++. ++|+.+. .++++
T Consensus 190 ~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~---------~~~~v 260 (377)
T 2pyg_A 190 AYANDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLK---------MTSDI 260 (377)
T ss_dssp EESCSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEE---------EEEEE
T ss_pred EEccccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEec---------cccCe
Confidence 012456666554 566666666666655655552 235566666665544 3444442 36788
Q ss_pred eEeeeeeecc-eeeeEEeeeccCcceeeeEEeeeeEeeeee----ecEEEeeeeecCC-cccc--ccceEEeeceeeeEe
Q 009748 377 TVRDVMMHNT-MNGVRIKTWQGGSGSVQGVLFSNIQVSEVQ----LPIVIDQFYCDKS-TCKN--QTSAVALSGITYERV 448 (527)
Q Consensus 377 ~v~Ni~i~~~-~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v~----~pi~I~~~y~~~~-~~~~--~~~~~~i~nItf~NI 448 (527)
+|+|+++.++ ..|++|+. +++++|+|+++.+.. ++..+.+.|+... .+.. ......|++.+|+++
T Consensus 261 ~i~~N~i~~~~~~GI~i~g-------~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~N~i~g~ 333 (377)
T 2pyg_A 261 TLQNADIHGNGSSGVRVYG-------AQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGASGTYYTTLNTRIEGNTISGS 333 (377)
T ss_dssp EEESCEEESCSSCSEEEEE-------EEEEEEESCEEESCCSSSSCCSEEEECEEETTSSSCEEECCBCCEEESCEEECC
T ss_pred EEECCEEECCCCceEEEec-------CCCcEEECcEEECCcccccccceEEEEecCCCccceeeeeccCeEEECCEEECc
Confidence 8888888887 77888873 678888888887653 2333333444321 0000 122344555555554
Q ss_pred eeeEEeeeeeeeecCCCceeeeeeeeEeecchh
Q 009748 449 KGTYTVKPVHFACSDSLPCVDVTLSVIELKPVQ 481 (527)
Q Consensus 449 ~gt~~~~pi~i~c~~~~~~~~I~f~nV~v~~~~ 481 (527)
... ...+.+.. ..+++++|++..+.+..
T Consensus 334 ~~~--~~~i~~~~---~~~~~~~i~~n~i~~~~ 361 (377)
T 2pyg_A 334 ANS--TYGIQERN---DGTDYSSLIDNDIAGVQ 361 (377)
T ss_dssp SSC--CEEEEECS---SSCBCCEEESCEEESSS
T ss_pred CCC--ccceEEcc---CCCccEEEECcEEeCCc
Confidence 322 23444422 45678888888887765
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.91 E-value=4.6e-24 Score=228.08 Aligned_cols=200 Identities=13% Similarity=0.134 Sum_probs=162.9
Q ss_pred eEEEeeeeeEEEEEEEEecC--CcceeeecceeEEEEEEeeecCCCCCCCCCceeeec------------ccceEEEecc
Q 009748 264 ALRFYGSFNVTVTGITIQNS--PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQN------------SKDVLIHTSN 329 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns--~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~------------s~nV~I~n~~ 329 (527)
.+++.+|+|++|+|++|.++ ..+++++..|+||+|+|+.|.+. .|+|.+.+ |+||+|+||+
T Consensus 215 ~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~g-----DDcIaiksg~~~dg~~~~~ps~nI~I~n~~ 289 (448)
T 3jur_A 215 CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTG-----DDSVVIKSGRDADGRRIGVPSEYILVRDNL 289 (448)
T ss_dssp SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEES-----SEEEEEBCCCHHHHHHHCCCEEEEEEESCE
T ss_pred eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeC-----CCcEEeccCccccccccCCCceeEEEEEeE
Confidence 57889999999999999985 35679999999999999999984 45555542 7999999999
Q ss_pred c--ccCCceeEeccC----CceeEEeeeccCC-CCcccccccCCCCccceeeceeEeeeeeecceeee-EEeeecc----
Q 009748 330 L--ACGDDCVSIQTG----CSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGV-RIKTWQG---- 397 (527)
Q Consensus 330 i--~~gDD~Iai~sg----s~NV~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi-~Ikt~~g---- 397 (527)
+ ..+++||++++. .+||+|+||++.. .+|++|++... .++.++||+|+|++|.+..+++ .|+....
T Consensus 290 ~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g--~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~ 367 (448)
T 3jur_A 290 VISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSR--RGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEG 367 (448)
T ss_dssp EECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTT--TCSEEEEEEEESCEEEEESSEEEEEESCGGGCCC
T ss_pred EecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcC--CCceEeeEEEEEEEEECCccccEEEEeeccCCCC
Confidence 9 566779999874 5999999999977 47999998642 3578999999999999998888 8877543
Q ss_pred -CcceeeeEEeeeeEeeeeeecEEEeeeeecCCccccccceEEeeceeeeEeeeeEEeeeeeeee----cCCCceeeeee
Q 009748 398 -GSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYTVKPVHFAC----SDSLPCVDVTL 472 (527)
Q Consensus 398 -~~G~V~NI~f~Ni~v~~v~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~~~pi~i~c----~~~~~~~~I~f 472 (527)
..+.|+||+|+||+.++..+++.|... +..+++||+|+||+++....+..+.. .....++||+|
T Consensus 368 ~~~~~i~nI~~~NI~~t~~~~~i~i~g~-----------~~~p~~~I~~~nv~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (448)
T 3jur_A 368 EYLPVVRSVFVKNLKATGGKYAVRIEGL-----------ENDYVKDILISDTIIEGAKISVLLEFGQLGMENVIMNGSRF 436 (448)
T ss_dssp SCCCEEEEEEEESCEEEECSEEEEEECB-----------TTBCEEEEEEEEEEEESCSEEEEEEEEEEEEEEEEETTEEE
T ss_pred CCCceEEEEEEEeEEEEecceEEEEEeC-----------CCCCEeeEEEEEEEEEccccceeEeccccccccceecccEE
Confidence 346899999999999987788877531 23579999999999986655555543 33456899999
Q ss_pred eeEeecchh
Q 009748 473 SVIELKPVQ 481 (527)
Q Consensus 473 ~nV~v~~~~ 481 (527)
+||+|+++.
T Consensus 437 ~nv~ing~~ 445 (448)
T 3jur_A 437 EKLYIEGKA 445 (448)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEcCEE
Confidence 999998864
No 20
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.88 E-value=1.2e-21 Score=217.14 Aligned_cols=221 Identities=11% Similarity=0.077 Sum_probs=174.6
Q ss_pred eEEEeeeeeEEEEEEEEec--C-CcceeeecceeEEEEEEeeecCCCC------CCCCCceeeecccceEEEecccccCC
Q 009748 264 ALRFYGSFNVTVTGITIQN--S-PQCHLKFDNCIGVVVHDVSVSSPGD------SPNTDGIHLQNSKDVLIHTSNLACGD 334 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~n--s-~~~~i~~~~c~nV~I~nv~I~s~~~------~~ntDGI~i~~s~nV~I~n~~i~~gD 334 (527)
.+++.+|+|++|+|+++.+ + ..++|++..|+||+|+|++|.+.+| +.+.||++...|+||+|+||++..++
T Consensus 356 ~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~gh 435 (608)
T 2uvf_A 356 GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGH 435 (608)
T ss_dssp SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSS
T ss_pred EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCC
Confidence 5788999999999999875 2 2467999999999999999998654 34566666667899999999999999
Q ss_pred ceeEeccC----CceeEEeeeccCCC-CcccccccCCCCccceeeceeEeeeeeecc-eeeeEEeeecc-----------
Q 009748 335 DCVSIQTG----CSNVYVHNVNCGPG-HGISIGSLGKDNTKACVSNITVRDVMMHNT-MNGVRIKTWQG----------- 397 (527)
Q Consensus 335 D~Iai~sg----s~NV~I~n~~~~~g-~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~-~~Gi~Ikt~~g----------- 397 (527)
+++++++. .+||+|+||+|.+. +||+|++... .++.++||+|+|++|.+. .++|.|+....
T Consensus 436 g~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g--~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~ 513 (608)
T 2uvf_A 436 GAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTST--IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPA 513 (608)
T ss_dssp CSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETT--TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCC
T ss_pred CeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecC--CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCc
Confidence 98888773 59999999999884 6999998642 347899999999999998 59999987653
Q ss_pred -CcceeeeEEeeeeEeeeee---ecEEEeeeeecCCccccccceEEeeceeeeEeeeeEEeeeeeeeecCCCceeeeeee
Q 009748 398 -GSGSVQGVLFSNIQVSEVQ---LPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYTVKPVHFACSDSLPCVDVTLS 473 (527)
Q Consensus 398 -~~G~V~NI~f~Ni~v~~v~---~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~~~pi~i~c~~~~~~~~I~f~ 473 (527)
..+.++||+|+||+++++. .++.|.. + | .....++||+|+||+++... +..+. .|++++|+
T Consensus 514 ~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g-~-----~---~~~~p~~ni~~~nv~i~~~~-~~~i~-----~~~~~~~~ 578 (608)
T 2uvf_A 514 KIPAQFYDFTLKNVTVDNSTGKNPSIEIKG-D-----T---ANKAWHRLVHVNNVQLNNVT-PTAIS-----DLRDSEFN 578 (608)
T ss_dssp SSCCEEEEEEEEEEEEEEECSSSCSEEEEC-B-----G---GGTBCEEEEEEEEEEEESCC-CCEEE-----SEESCEEE
T ss_pred CCCCccccEEEEeEEEEeeeceEEeEEEEE-E-----c---CCCCccccEEEEeEEEEccC-ceeEE-----eccCceEE
Confidence 2356999999999999876 3666653 2 2 23457999999999988643 44443 57999999
Q ss_pred eEeecchhhhhcccCchhhhhcccCCCCCCC
Q 009748 474 VIELKPVQERYHMYDPYCWQAFGESTTPTHP 504 (527)
Q Consensus 474 nV~v~~~~~~~~~~~~~c~~v~g~~~~~~~~ 504 (527)
||.+..... ...+.|.++.+.......|
T Consensus 579 nv~i~~~~~---~~~~~~~~v~~~~~~~v~~ 606 (608)
T 2uvf_A 579 KVTFTELRG---DTPWHFSEVKNVKVDGKPV 606 (608)
T ss_dssp EEEEESCSS---SCSCCEESCBSCCBTTCCC
T ss_pred eEEEeCCCC---CccEEEEeeeceEEcceEe
Confidence 999987552 1247899999976544444
No 21
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.87 E-value=1.5e-21 Score=215.31 Aligned_cols=262 Identities=16% Similarity=0.206 Sum_probs=183.4
Q ss_pred CCcceeeecccccCCCCCcchHHHHHHHHhccccee---------eeEEecCceeEEE-eeeccccccccceEEEEecc-
Q 009748 106 HSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEA---------SIMVVPAESVFLV-GPMSFSGPYCQANIIFQLDG- 174 (527)
Q Consensus 106 ~~~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg---------~~V~iP~G~~yl~-~~l~l~g~~~~sni~l~~~G- 174 (527)
....+||+||||+|||++|||+|||+||++|.+.|+ ++||||+| +|++ ++|.+ ++++.|..++
T Consensus 46 y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~G-tYlvs~tI~l-----~~~t~L~G~~~ 119 (758)
T 3eqn_A 46 YPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPG-TYKVSSPLVV-----LYQTQLIGDAK 119 (758)
T ss_dssp CCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSS-EEEESSCEEC-----CTTEEEEECSS
T ss_pred CeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCc-eEEEcccEEc-----cCCeEEEecCC
Confidence 445779999999999999999999999998755443 69999999 7876 68988 6799999884
Q ss_pred ---eEEccCCCcccccceeeeEEeeeeeceEEeeceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccc
Q 009748 175 ---TIIAPTGSKDWGKGLLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRS 251 (527)
Q Consensus 175 ---tl~~~~~~~~~~~~~~~~i~~~~~~nI~I~G~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (527)
+|++..... + .. .|.+ ...+++|..||..
T Consensus 120 ~~pvIka~~~F~---G--~~----------li~~-d~y~~~G~~w~~~-------------------------------- 151 (758)
T 3eqn_A 120 NLPTLLAAPNFS---G--IA----------LIDA-DPYLAGGAQYYVN-------------------------------- 151 (758)
T ss_dssp SCCEEEECTTCC---S--SC----------SEES-SCBCGGGCBSSCG--------------------------------
T ss_pred CCCeEecCCCCC---C--cc----------eeec-cccCCCCcccccc--------------------------------
Confidence 465543321 1 00 1233 3445677777754
Q ss_pred cccCCCCCCCcceEEEeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCC-CCCceeeecccceEEEeccc
Q 009748 252 ELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSP-NTDGIHLQNSKDVLIHTSNL 330 (527)
Q Consensus 252 ~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~-ntDGI~i~~s~nV~I~n~~i 330 (527)
....+..++|++|+ ++..+....+||+..|+++.++||.|..+..+. ..+||++..+..+.|+|++|
T Consensus 152 -----------~~~F~r~irNlviD-~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f 219 (758)
T 3eqn_A 152 -----------QNNFFRSVRNFVID-LRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVF 219 (758)
T ss_dssp -----------GGCCCEEEEEEEEE-CTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEE
T ss_pred -----------ccceeeeecceEEe-ccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEE
Confidence 12345678888888 777777788999999999999999999875543 48999999988999999999
Q ss_pred ccCCceeEeccCCceeEEeeeccCCCC-cccccccCCCCccceeeceeEeeeeeecceeeeEEeeecc---CcceeeeEE
Q 009748 331 ACGDDCVSIQTGCSNVYVHNVNCGPGH-GISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQG---GSGSVQGVL 406 (527)
Q Consensus 331 ~~gDD~Iai~sgs~NV~I~n~~~~~g~-GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g---~~G~V~NI~ 406 (527)
..|+-++.++. ...+++|.+|.++. +|.+.- --..++.+++|.++..||.+..... ....|--|+
T Consensus 220 ~GG~~G~~~gn--QQfT~rnltF~~~~taI~~~w---------~wgwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~ 288 (758)
T 3eqn_A 220 NGGNIGATFGN--QQFTVRNLTFNNANTAINAIW---------NWGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEA 288 (758)
T ss_dssp ESCSEEEEEEC--SCCEEEEEEEESCSEEEEEEE---------BSCEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEE
T ss_pred eCCceEEEcCC--cceEEeccEEeChHHHHhhhc---------CceEEEEEeEEECCCccEEEcCCCCCcccCcceeeEE
Confidence 99998988855 34455555554422 444321 0136677777777888888876321 123577888
Q ss_pred eeeeEeeeeeecEEEeeeeecCCccccccceEEeeceeeeEee
Q 009748 407 FSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSGITYERVK 449 (527)
Q Consensus 407 f~Ni~v~~v~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~ 449 (527)
+.|-+++++...|.. .+.... .......++||.|+|+.
T Consensus 289 l~Ds~~~n~~~~i~t--~~~~~~---~~~~slvleNv~~~nv~ 326 (758)
T 3eqn_A 289 IIDAVVTNTQTFVRW--SGASSG---HLQGSLVLNNIQLTNVP 326 (758)
T ss_dssp EEEEEEESCSEEEEE--SSCCCS---SCSSEEEEEEEEEEEEE
T ss_pred EEEeeEEcccceEEe--ccCCCC---CCcceEEEEeEEeeCCC
Confidence 888888877655433 222111 01124667777777754
No 22
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.81 E-value=1.7e-18 Score=181.52 Aligned_cols=169 Identities=17% Similarity=0.241 Sum_probs=138.2
Q ss_pred eEEEeeeeeEEEEEEEEecC----CcceeeecceeEEEEEEeeecCCCCCCCCCceeee------cccceEEEecccccC
Q 009748 264 ALRFYGSFNVTVTGITIQNS----PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQ------NSKDVLIHTSNLACG 333 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns----~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~------~s~nV~I~n~~i~~g 333 (527)
.+++.+|++++|++++|.++ ..++|++..|+||+|+|+.|.+ ..|+|.+. .|+||+|+||++..+
T Consensus 176 ~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiks~~~~~~s~nI~I~n~~~~~g 250 (376)
T 1bhe_A 176 HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIAT-----GDDNVAIKAYKGRAETRNISILHNDFGTG 250 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEEC-----SSCSEEEEECTTSCCEEEEEEEEEEECSS
T ss_pred EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEec-----CCCeEEEcccCCCCCceEEEEEeeEEEcc
Confidence 46788999999999999985 2467999999999999999997 46899998 599999999999986
Q ss_pred CceeEecc---CCceeEEeeeccCC-CCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeecc-----Ccceeee
Q 009748 334 DDCVSIQT---GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQG-----GSGSVQG 404 (527)
Q Consensus 334 DD~Iai~s---gs~NV~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g-----~~G~V~N 404 (527)
. +|++++ +.+||+|+||++.. .+|++|++.. +..+.++||+|+|++|.+..++|.|..... ..+.|+|
T Consensus 251 h-GisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~--g~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~~~~~~i~n 327 (376)
T 1bhe_A 251 H-GMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDK--SAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDWSD 327 (376)
T ss_dssp S-CEEEEEEESSEEEEEEEEEEEESCSEEEEEECCT--TTCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCCCCCEEEE
T ss_pred c-cEEeccCCccEeeEEEEeeEEeCCCcEEEEEEec--CCCceEeeEEEEeEEEeCCCceEEEEeeccCCCCCcCcEEEE
Confidence 5 598876 57999999999987 4599999753 245789999999999999999998875432 1357999
Q ss_pred EEeeeeEeeeeeecEEEeeeeecCCccccccceEEeeceeeeEeeeeE
Q 009748 405 VLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTY 452 (527)
Q Consensus 405 I~f~Ni~v~~v~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~ 452 (527)
|+|+||+.++.. ++.+.. . ++.+++||+|+||+++.
T Consensus 328 i~~~ni~gt~~~-~~~l~g---~--------~~~~~~~I~l~nv~l~~ 363 (376)
T 1bhe_A 328 ITFKDVTSETKG-VVVLNG---E--------NAKKPIEVTMKNVKLTS 363 (376)
T ss_dssp EEEEEEEECSCC-EEEEEC---T--------TCSSCEEEEEEEEECCT
T ss_pred EEEEEEEEEecc-eEEEEe---C--------CCCCeeeEEEEeEEEec
Confidence 999999998643 555542 1 23457899999998774
No 23
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.80 E-value=1.2e-18 Score=180.20 Aligned_cols=169 Identities=19% Similarity=0.266 Sum_probs=140.0
Q ss_pred eEEEeeeeeEEEEEEEEecCC--------cceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCc
Q 009748 264 ALRFYGSFNVTVTGITIQNSP--------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDD 335 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns~--------~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD 335 (527)
.+++.+|+|++|++++|.++. .+++++..|+||+|+|++|.+ ..|+|.+.+++||+|+||++..++
T Consensus 125 ~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh- 198 (339)
T 2iq7_A 125 AFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKN-----QDDCLAINSGTNITFTGGTCSGGH- 198 (339)
T ss_dssp CEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSC-
T ss_pred eEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEec-----CCCEEEEcCCccEEEEeEEEECCc-
Confidence 578899999999999999853 346999999999999999987 468999999999999999999987
Q ss_pred eeEecc-------CCceeEEeeeccCC-CCcccccccCCCCccceeeceeEeeeeeeccee-eeEEeeec---------c
Q 009748 336 CVSIQT-------GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTMN-GVRIKTWQ---------G 397 (527)
Q Consensus 336 ~Iai~s-------gs~NV~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~-Gi~Ikt~~---------g 397 (527)
+|++++ +.+||+|+||++.. .+|++|++.. +..+.++||+|+|++|.+..+ ++.|.... .
T Consensus 199 GisiGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~ 276 (339)
T 2iq7_A 199 GLSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVS--GATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPT 276 (339)
T ss_dssp CEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEET--TCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCC
T ss_pred eEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeC--CCCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCCC
Confidence 699976 26999999999977 5689998853 235789999999999999876 99887642 1
Q ss_pred CcceeeeEEeeeeEeeeee--ecEEEeeeeecCCccccccceEEeeceeeeEeeeeE
Q 009748 398 GSGSVQGVLFSNIQVSEVQ--LPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTY 452 (527)
Q Consensus 398 ~~G~V~NI~f~Ni~v~~v~--~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~ 452 (527)
....|+||+|+||+.+... .++.|. |. ...++||+|+||+++.
T Consensus 277 ~~~~i~ni~~~ni~gt~~~~~~~~~i~---c~---------~~~c~ni~~~nv~i~~ 321 (339)
T 2iq7_A 277 NGVPITGLTLSKITGSVASSGTNVYIL---CA---------SGACSNWKWSGVSVTG 321 (339)
T ss_dssp SSSCEEEEEEEEEEEEECTTSEEEEEE---CC---------TTCEEEEEEEEEEEES
T ss_pred CCceEEEEEEEeEEEEeCCCCEEEEEE---eC---------CCcEecEEEEeEEEEc
Confidence 2357999999999998764 566553 21 2468999999999874
No 24
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.78 E-value=8.3e-18 Score=175.27 Aligned_cols=192 Identities=14% Similarity=0.124 Sum_probs=154.2
Q ss_pred eEEEeeeeeEEEEE---EEEecC--Ccc------------eeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEE
Q 009748 264 ALRFYGSFNVTVTG---ITIQNS--PQC------------HLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIH 326 (527)
Q Consensus 264 ~i~~~~~~nv~I~g---iti~ns--~~~------------~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~ 326 (527)
++.+ +.+||+|.| -+|... ..| .+++..|+|++|+|+++.++. ..+|++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp----~~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTP----LMAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCS----SCCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCC----ccEEEEe-eCCEEEE
Confidence 4556 559999999 466433 233 389999999999999999853 2369999 9999999
Q ss_pred ecccccC---------CceeEeccCCceeEEeeeccCCCC-cccccccCCCCccceeeceeEeeeeeecceeeeEEeeec
Q 009748 327 TSNLACG---------DDCVSIQTGCSNVYVHNVNCGPGH-GISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQ 396 (527)
Q Consensus 327 n~~i~~g---------DD~Iai~sgs~NV~I~n~~~~~g~-GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~ 396 (527)
|++|.+. .|+|.+.+ ++||+|+||++..++ +|+|++. +||+|+||++.+. +|+.|.+..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCC-ceeEEeecc
Confidence 9999862 46777765 899999999998865 6999861 8999999999986 699999852
Q ss_pred -cCcceeeeEEeeeeEeeeeeecEEEeeeeecCCccccccceEEeeceeeeEeeeeEEe-eeeeeee---c--------C
Q 009748 397 -GGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYTV-KPVHFAC---S--------D 463 (527)
Q Consensus 397 -g~~G~V~NI~f~Ni~v~~v~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~~-~pi~i~c---~--------~ 463 (527)
...+.|+||+|+|+++.+..+++.|+... ...+.++||+|+||++.... .|+.+.. . .
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~---------g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~~ 302 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTIS---------GATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPTN 302 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEET---------TCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCCS
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeC---------CCCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCCC
Confidence 24579999999999999999999998631 23478999999999988765 5777752 1 1
Q ss_pred CCceeeeeeeeEeecchh
Q 009748 464 SLPCVDVTLSVIELKPVQ 481 (527)
Q Consensus 464 ~~~~~~I~f~nV~v~~~~ 481 (527)
..+++||+|+||+.+...
T Consensus 303 ~~~i~nI~~~ni~gt~~~ 320 (362)
T 1czf_A 303 GVTIQDVKLESVTGSVDS 320 (362)
T ss_dssp SEEEEEEEEEEEEEEECT
T ss_pred CceEEEEEEEEEEEEecC
Confidence 357999999999988765
No 25
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.78 E-value=8.8e-18 Score=174.32 Aligned_cols=170 Identities=16% Similarity=0.217 Sum_probs=139.0
Q ss_pred eEEEeeeeeEEEEEEEEecCC----------------cceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEe
Q 009748 264 ALRFYGSFNVTVTGITIQNSP----------------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHT 327 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns~----------------~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n 327 (527)
.+++.+|+|++|++++|.+++ .+++++..|+||+|+|+.|.+ ..|+|.+.+++||+|+|
T Consensus 129 ~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n 203 (349)
T 1hg8_A 129 CFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDCVAVTSGTNIVVSN 203 (349)
T ss_dssp EEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCSEEESSEEEEEEEE
T ss_pred eEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCeEEeeCCeEEEEEe
Confidence 578899999999999999753 346999999999999999997 56899999999999999
Q ss_pred cccccCCceeEecc-------CCceeEEeeeccCC-CCcccccccCCCCccceeeceeEeeeeeecce-eeeEEeeecc-
Q 009748 328 SNLACGDDCVSIQT-------GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTM-NGVRIKTWQG- 397 (527)
Q Consensus 328 ~~i~~gDD~Iai~s-------gs~NV~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~-~Gi~Ikt~~g- 397 (527)
|++..++ +|++++ +.+||+|+||++.. .+|+.|++.. +..+.++||+|+|++|.+.. +++.|.....
T Consensus 204 ~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~ 280 (349)
T 1hg8_A 204 MYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNS--GATGTINNVTYQNIALTNISTYGVDVQQDYLN 280 (349)
T ss_dssp EEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEET--TCCEEEEEEEEEEEEEEEEEEEEEEEEEEECS
T ss_pred EEEeCCc-ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecC--CCCccccceEEEEEEEEccccccEEEEeeccC
Confidence 9999876 699966 27999999999987 5689998753 23578999999999999986 6999876531
Q ss_pred --------CcceeeeEEeeeeEeeeee--ecEEEeeeeecCCccccccceEEeeceeeeEeeeeEE
Q 009748 398 --------GSGSVQGVLFSNIQVSEVQ--LPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYT 453 (527)
Q Consensus 398 --------~~G~V~NI~f~Ni~v~~v~--~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~ 453 (527)
....|+||+|+||+.+... .++.|. |. ...++||+|+||+++..
T Consensus 281 ~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~---c~---------~~~c~ni~~~nv~i~~~ 334 (349)
T 1hg8_A 281 GGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFIL---CG---------DGSCSGFTFSGNAITGG 334 (349)
T ss_dssp SSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEE---CC---------SSCEEEEEEESCEEECC
T ss_pred CCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEE---eC---------CCcCcCEEEEeEEEEcC
Confidence 1247999999999987654 455553 21 25689999999998853
No 26
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.78 E-value=1.2e-17 Score=172.80 Aligned_cols=193 Identities=15% Similarity=0.198 Sum_probs=156.2
Q ss_pred eEEEeeeeeEEEEEE---EEecCC--cc-------------eeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEE
Q 009748 264 ALRFYGSFNVTVTGI---TIQNSP--QC-------------HLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLI 325 (527)
Q Consensus 264 ~i~~~~~~nv~I~gi---ti~ns~--~~-------------~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I 325 (527)
++.+. .+||+|.|. +|.... .| .+.+..|+|++|++++|.++. ..+|++..|+||+|
T Consensus 66 li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVS-GSDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEE-EESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEE-cCcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeEE
Confidence 45564 499999997 775432 23 388999999999999999853 36899999999999
Q ss_pred EecccccC---------CceeEeccCCceeEEeeeccCCC-CcccccccCCCCccceeeceeEeeeeeecceeeeEEeee
Q 009748 326 HTSNLACG---------DDCVSIQTGCSNVYVHNVNCGPG-HGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTW 395 (527)
Q Consensus 326 ~n~~i~~g---------DD~Iai~sgs~NV~I~n~~~~~g-~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~ 395 (527)
++++|.+. .|+|.+.. ++||+|+||++..+ ++|+|++ -+||+|+||++.+. +|+.|.+.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiks---------g~nI~i~n~~~~~g-hGisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNS---------GENIYFSGGYCSGG-HGLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESS---------EEEEEEESCEEESS-SCEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeC---------CeEEEEEeEEEECC-ceEEECcC
Confidence 99999863 56788866 89999999999875 4799976 18999999999976 69999885
Q ss_pred cc-CcceeeeEEeeeeEeeeeeecEEEeeeeecCCccccccceEEeeceeeeEeeeeEEee-eeeeeec---------CC
Q 009748 396 QG-GSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYTVK-PVHFACS---------DS 464 (527)
Q Consensus 396 ~g-~~G~V~NI~f~Ni~v~~v~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~~~-pi~i~c~---------~~ 464 (527)
.. ..+.|+||+|+|+++.+..+++.|+... ...+.++||+|+||++..... |+.+... ..
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~---------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~~ 280 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNI---------DTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTTG 280 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEET---------TCCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCSS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeC---------CCCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcCC
Confidence 32 3478999999999999999999998631 234689999999999997655 8777641 13
Q ss_pred CceeeeeeeeEeecchh
Q 009748 465 LPCVDVTLSVIELKPVQ 481 (527)
Q Consensus 465 ~~~~~I~f~nV~v~~~~ 481 (527)
.+++||+|+||+.+...
T Consensus 281 ~~i~ni~~~ni~gt~~~ 297 (339)
T 1ia5_A 281 VPITDFVLDNVHGSVVS 297 (339)
T ss_dssp SCEEEEEEEEEEEEECT
T ss_pred ceEEEEEEEeEEEEeCC
Confidence 67999999999988765
No 27
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.77 E-value=7.5e-18 Score=174.05 Aligned_cols=168 Identities=18% Similarity=0.250 Sum_probs=138.6
Q ss_pred eEEEeeeeeEEEEEEEEecCC--------cceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCc
Q 009748 264 ALRFYGSFNVTVTGITIQNSP--------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDD 335 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns~--------~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD 335 (527)
.+++. |+|++|++++|.++. .++|++..|+||+|+|+.|.+ ..|+|.+.+++||+|+||++..++
T Consensus 125 ~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh- 197 (336)
T 1nhc_A 125 AISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKN-----QDDCIAINSGESISFTGGTCSGGH- 197 (336)
T ss_dssp CEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEES-----SSEEEEESSEEEEEEESCEEESSS-
T ss_pred EEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEc-----CCCEEEEeCCeEEEEEeEEEECCc-
Confidence 47889 999999999999863 456999999999999999987 568999999999999999999886
Q ss_pred eeEecc-------CCceeEEeeeccCC-CCcccccccCCCCccceeeceeEeeeeeeccee-eeEEeeecc---------
Q 009748 336 CVSIQT-------GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTMN-GVRIKTWQG--------- 397 (527)
Q Consensus 336 ~Iai~s-------gs~NV~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~-Gi~Ikt~~g--------- 397 (527)
+|++++ +.+||+|+||++.. .+|+.|++.. +..+.++||+|+|++|.+..+ ++.|.....
T Consensus 198 GisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~ 275 (336)
T 1nhc_A 198 GLSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIY--KETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTPS 275 (336)
T ss_dssp EEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEET--TCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCC
T ss_pred CceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEEC--CCCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCCC
Confidence 699976 26999999999977 5689998752 235789999999999999875 988875421
Q ss_pred CcceeeeEEeeeeEeeeee--ecEEEeeeeecCCccccccceEEeeceeeeEeeeeE
Q 009748 398 GSGSVQGVLFSNIQVSEVQ--LPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTY 452 (527)
Q Consensus 398 ~~G~V~NI~f~Ni~v~~v~--~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~ 452 (527)
....|+||+|+||+.+... .++.|. |. ...++||+|+||+++.
T Consensus 276 ~~~~i~~i~~~ni~gt~~~~~~~v~i~---c~---------~~~c~ni~~~nv~i~~ 320 (336)
T 1nhc_A 276 TGIPITDVTVDGVTGTLEDDATQVYIL---CG---------DGSCSDWTWSGVDLSG 320 (336)
T ss_dssp SSSCEEEEEEEEEEEEECTTCEEEEEE---CC---------TTCEEEEEEEEEEEES
T ss_pred CCceEEEEEEEeEEEEeCCCCEEEEEE---cC---------CCcEecEEEEeEEEEc
Confidence 2357999999999998754 556554 21 2468999999999885
No 28
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.75 E-value=6e-17 Score=172.07 Aligned_cols=169 Identities=15% Similarity=0.203 Sum_probs=138.5
Q ss_pred eEEEeeeeeEEEEEEEEecC---CcceeeecceeEEEEEEeeecCCCCCCCCCceeeec-ccceEEEecccccCCceeEe
Q 009748 264 ALRFYGSFNVTVTGITIQNS---PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQN-SKDVLIHTSNLACGDDCVSI 339 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns---~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~-s~nV~I~n~~i~~gDD~Iai 339 (527)
.+++..|+||+|+|++|.+. ..++|++.. +||+|+|+.|.+ ..|+|.+.+ ++||+|+||++..++ +|++
T Consensus 152 ~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~-~nV~I~n~~i~~-----gDD~Iai~s~~~nI~I~n~~~~~~~-GisI 224 (422)
T 1rmg_A 152 HFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG-SNIWVHDVEVTN-----KDECVTVKSPANNILVESIYCNWSG-GCAM 224 (422)
T ss_dssp SEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE-EEEEEEEEEEES-----SSEEEEEEEEEEEEEEEEEEEESSS-EEEE
T ss_pred EEEEeCcCCEEEEeEEEECCCCCCCccEeecC-CeEEEEeeEEeC-----CCCeEEeCCCCcCEEEEeEEEcCCc-ceee
Confidence 57889999999999999972 356799998 999999999987 468999987 999999999988775 9999
Q ss_pred cc-----CCceeEEeeeccCC-CCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeec-------cCcceeeeEE
Q 009748 340 QT-----GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQ-------GGSGSVQGVL 406 (527)
Q Consensus 340 ~s-----gs~NV~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~-------g~~G~V~NI~ 406 (527)
++ +.+||+|+||++.. .+||.|++.+ ..+.++||+|+|++|.+..+++.|.... .....|+||+
T Consensus 225 GS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~---g~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~~~~~~~~i~nI~ 301 (422)
T 1rmg_A 225 GSLGADTDVTDIVYRNVYTWSSNQMYMIKSNG---GSGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGDGVQLNNIT 301 (422)
T ss_dssp EEECTTEEEEEEEEEEEEEESSSCSEEEEEBB---CCEEEEEEEEEEEEEEEESCSEEEETBCTTSCCBSSSCCEEEEEE
T ss_pred cccCCCCcEEEEEEEeEEEeccceEEEEEecC---CCcEEEEEEEEeEEEECccccEEEEeeccCCCcccCCCceEEEEE
Confidence 65 26999999999977 5689998743 2468999999999999999999987542 1235799999
Q ss_pred eeeeEeeee----eecEEEeeeeecCCccccccceEEeeceeeeEeeeeEE
Q 009748 407 FSNIQVSEV----QLPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYT 453 (527)
Q Consensus 407 f~Ni~v~~v----~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~ 453 (527)
|+||+.+.. ..++.|.. . +...++||+|+||+++..
T Consensus 302 ~~nI~gt~~~g~~~~~i~i~~---~--------~~~~~~ni~l~nv~i~~~ 341 (422)
T 1rmg_A 302 VKNWKGTEANGATRPPIRVVC---S--------DTAPCTDLTLEDIAIWTE 341 (422)
T ss_dssp EEEEEEEESCTTTSCSEEEEC---B--------TTBCEEEEEEEEEEEEES
T ss_pred EEeEEEEecccccceeEEEEe---C--------CCCcEeeEEEEeEEEEcC
Confidence 999999864 23666543 1 235689999999998753
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.75 E-value=2.9e-17 Score=169.50 Aligned_cols=189 Identities=14% Similarity=0.129 Sum_probs=151.2
Q ss_pred eEEEeeeeeEEEEEE--EEecCC--cc-------------eeeecceeEEEEEEeeecCCCCCCCCCceeeecccc-eEE
Q 009748 264 ALRFYGSFNVTVTGI--TIQNSP--QC-------------HLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKD-VLI 325 (527)
Q Consensus 264 ~i~~~~~~nv~I~gi--ti~ns~--~~-------------~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~n-V~I 325 (527)
++.+. .+||+|.|- +|.-.. .| .+.+..|+ ++|+++++.++. ..+|++..|+| |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp----~~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSP----AQAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCS----SCCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCC----cceEEEEccCCeEEE
Confidence 45664 699999983 553221 12 27888999 999999999853 34699999999 999
Q ss_pred EecccccC----------CceeEeccCCceeEEeeeccCCCC-cccccccCCCCccceeeceeEeeeeeecceeeeEEee
Q 009748 326 HTSNLACG----------DDCVSIQTGCSNVYVHNVNCGPGH-GISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKT 394 (527)
Q Consensus 326 ~n~~i~~g----------DD~Iai~sgs~NV~I~n~~~~~g~-GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt 394 (527)
+|++|.+. .|+|.+ .++||+|+||++..++ .|+|++ + +||+|+||++... +|+.|.+
T Consensus 134 ~~v~I~~~~~d~~~~~~NtDGidi--~s~nV~I~n~~i~~gDDcIaiks-------g--~nI~i~n~~~~~g-hGisIGS 201 (335)
T 1k5c_A 134 DGITVDDFAGDTKNLGHNTDGFDV--SANNVTIQNCIVKNQDDCIAIND-------G--NNIRFENNQCSGG-HGISIGS 201 (335)
T ss_dssp ESCEEECGGGGGGGCCCSCCSEEE--ECSSEEEESCEEESSSCSEEEEE-------E--EEEEEESCEEESS-CCEEEEE
T ss_pred EEEEEECCCCcccccCCCCCeEcc--cCCeEEEEeeEEEcCCCEEEeeC-------C--eeEEEEEEEEECC-ccCeEee
Confidence 99999873 478888 4899999999998854 699986 1 8999999999976 7999998
Q ss_pred eccCcceeeeEEeeeeEeeeeeecEEEeeeeecCCccccccce-EEeeceeeeEeeeeEEe-eeeeeeec---------C
Q 009748 395 WQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSA-VALSGITYERVKGTYTV-KPVHFACS---------D 463 (527)
Q Consensus 395 ~~g~~G~V~NI~f~Ni~v~~v~~pi~I~~~y~~~~~~~~~~~~-~~i~nItf~NI~gt~~~-~pi~i~c~---------~ 463 (527)
.. ..+.|+||+|+|+++.+..+++.|+... ... +.++||+|+||++.... .|+.+... .
T Consensus 202 ~g-~~~~v~nV~v~n~~~~~t~~girIKt~~---------g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~~ 271 (335)
T 1k5c_A 202 IA-TGKHVSNVVIKGNTVTRSMYGVRIKAQR---------TATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGT 271 (335)
T ss_dssp EC-TTCEEEEEEEESCEEEEEEEEEEEEEET---------TCCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCCS
T ss_pred cc-CCCCEEEEEEEeeEEECCCceEEEEEeC---------CCCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCCC
Confidence 63 2579999999999999999999998632 233 67999999999999765 58877631 1
Q ss_pred CCceeeeeeeeEeecch
Q 009748 464 SLPCVDVTLSVIELKPV 480 (527)
Q Consensus 464 ~~~~~~I~f~nV~v~~~ 480 (527)
..+++||+|+||++++.
T Consensus 272 ~~~i~nI~~~nI~~~Gt 288 (335)
T 1k5c_A 272 GAPFSDVNFTGGATTIK 288 (335)
T ss_dssp SSCEEEEEECSSCEEEE
T ss_pred CceEEEEEEEEEEEeeE
Confidence 36899999999996643
No 30
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.69 E-value=6.5e-16 Score=168.75 Aligned_cols=247 Identities=13% Similarity=0.139 Sum_probs=168.3
Q ss_pred eee-EEecCceeEEEeeeccc-cccccceEEEEecceEEccCCC------ccccc---ceeeeEEe------eeeeceEE
Q 009748 141 ASI-MVVPAESVFLVGPMSFS-GPYCQANIIFQLDGTIIAPTGS------KDWGK---GLLWWLDF------TKLKGITI 203 (527)
Q Consensus 141 g~~-V~iP~G~~yl~~~l~l~-g~~~~sni~l~~~Gtl~~~~~~------~~~~~---~~~~~i~~------~~~~nI~I 203 (527)
+.+ +++++| .++.+++.+. + .+|++|...|+|-..... ..|.. .....|.+ .+++||.|
T Consensus 222 ~~~~L~l~~G-A~L~gs~~~~~~---~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I 297 (549)
T 1x0c_A 222 SVTWVYFAPG-AYVKGAVEFLST---ASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVL 297 (549)
T ss_dssp TCCEEEECTT-EEEESCEEECCC---SSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEE
T ss_pred CCCeEecCCC-CEEEEEEEEecC---ceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEE
Confidence 456 999999 8888888876 4 469999888998764321 11210 00112334 88999999
Q ss_pred eeceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcceEEEe-ee-ee--EEEEEEE
Q 009748 204 QGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFY-GS-FN--VTVTGIT 279 (527)
Q Consensus 204 ~G~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~-~~-~n--v~I~git 279 (527)
+|-.+.+.. +| .+++. .| ++ ++|+|++
T Consensus 298 ~Giti~Nsp---~w----------------------------------------------~i~i~~~~~~ni~V~I~n~~ 328 (549)
T 1x0c_A 298 NGVTVSAPP---FN----------------------------------------------SMDWSGNSLDLITCRVDDYK 328 (549)
T ss_dssp ESCEEECCS---SC----------------------------------------------SEEEECSCGGGEEEEEEEEE
T ss_pred ECcEEECCC---ce----------------------------------------------eEEeeccCCCCCeEEEEeeE
Confidence 995554442 22 24434 34 58 9999999
Q ss_pred EecCC---cceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCc-e-eEecc---CCceeEEeee
Q 009748 280 IQNSP---QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDD-C-VSIQT---GCSNVYVHNV 351 (527)
Q Consensus 280 i~ns~---~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD-~-Iai~s---gs~NV~I~n~ 351 (527)
+.++. .+++++. +||+|+||+|.+ ..|+|.+.+ +||+|+||++..+.. + |++++ ..+||+|+||
T Consensus 329 i~~~~~~NTDGidi~--~nV~I~n~~i~~-----gDDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~ 400 (549)
T 1x0c_A 329 QVGAFYGQTDGLEMY--PGTILQDVFYHT-----DDDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNV 400 (549)
T ss_dssp EECCCBTTCCCCBCC--TTCEEEEEEEEE-----SSCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEE
T ss_pred eEcCCCCCCCccccc--CCEEEEeeEEeC-----CCCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEee
Confidence 98643 3568888 999999999998 468999987 999999999987654 4 78874 4799999999
Q ss_pred ccCCCC-------cccccccCCC---------CccceeeceeEeeeeeecce-eeeEEeeeccC-cceeeeEEeeeeEee
Q 009748 352 NCGPGH-------GISIGSLGKD---------NTKACVSNITVRDVMMHNTM-NGVRIKTWQGG-SGSVQGVLFSNIQVS 413 (527)
Q Consensus 352 ~~~~g~-------GI~IGs~g~~---------~~~~~v~nI~v~Ni~i~~~~-~Gi~Ikt~~g~-~G~V~NI~f~Ni~v~ 413 (527)
++.... |..|++...+ +..+.++||+|+|++|.+.. +|+.+....+. .+.|+||+|+||+++
T Consensus 401 ~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~ 480 (549)
T 1x0c_A 401 DVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIE 480 (549)
T ss_dssp EEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEE
T ss_pred EEECccccccccceEEEecccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEE
Confidence 986533 3225441100 12467999999999999876 55544322222 236999999999998
Q ss_pred eee-----e-cEEEeeeeecCCccccccceEEeeceeeeEeeeeEE
Q 009748 414 EVQ-----L-PIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYT 453 (527)
Q Consensus 414 ~v~-----~-pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~ 453 (527)
++. . +..+.. |.. -.|. ....++||+|+||++.+.
T Consensus 481 ~~~~~~~~~~~~~i~G-~~~-~~~~---~~~~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 481 SFEPLSINTTESWMPV-WYD-LNNG---KQITVTDFSIEGFTVGNT 521 (549)
T ss_dssp EECCGGGTCSCEEECC-CBB-TTTC---CBCCEEEEEEEEEEETTE
T ss_pred ccccccccccceEEeC-CCc-cccc---cceeeeeEEEEeEEEeCe
Confidence 875 2 333332 211 0122 234799999999987654
No 31
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.69 E-value=2.9e-16 Score=171.69 Aligned_cols=234 Identities=12% Similarity=0.122 Sum_probs=164.3
Q ss_pred ee-EEecCceeEEEeeeccccccccceEEEEecceEEccCCCccc-------cc------c--eeeeEEeeeeeceEEee
Q 009748 142 SI-MVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDW-------GK------G--LLWWLDFTKLKGITIQG 205 (527)
Q Consensus 142 ~~-V~iP~G~~yl~~~l~l~g~~~~sni~l~~~Gtl~~~~~~~~~-------~~------~--~~~~i~~~~~~nI~I~G 205 (527)
-+ +++++| .++.+++.+.+ ..|++|...|+|-... ...| .. . ..+++.+.+++||.|+|
T Consensus 265 vt~L~L~~G-A~l~g~i~~~~---~~nv~ItG~GtIDG~G-~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~G 339 (574)
T 1ogo_X 265 TYWVYLAPG-AYVKGAIEYFT---KQNFYATGHGILSGEN-YVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVG 339 (574)
T ss_dssp CCEEEECTT-EEEESCEEECC---SSCEEEESSCEEECTT-SCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEES
T ss_pred CceEEecCC-cEEEccEEEeC---ceeEEEEeCEEEeCCC-cccccccccccccccCCcceEEEEeccccCCceeEEEEC
Confidence 45 888888 78888898876 6799999889886532 1111 10 0 11222334899999999
Q ss_pred ceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcceEEEeeeeeE--EEEEEEEecC
Q 009748 206 KGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNV--TVTGITIQNS 283 (527)
Q Consensus 206 ~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~~~~nv--~I~giti~ns 283 (527)
-.+++.. .| .+++.+|+|| +|+|+++.++
T Consensus 340 iti~NSp---~w----------------------------------------------~i~~~~c~nV~~~I~nv~i~~~ 370 (574)
T 1ogo_X 340 PTINAPP---FN----------------------------------------------TMDFNGNSGISSQISDYKQVGA 370 (574)
T ss_dssp CEEECCS---SC----------------------------------------------SEEECSSSCEEEEEEEEEEECC
T ss_pred eEEECCC---Cc----------------------------------------------EEeecCCCChhhEEEeeEeeCC
Confidence 6666532 12 3577889999 9999999875
Q ss_pred C---cceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCc-e-eEecc---CCceeEEeeeccCC
Q 009748 284 P---QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDD-C-VSIQT---GCSNVYVHNVNCGP 355 (527)
Q Consensus 284 ~---~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD-~-Iai~s---gs~NV~I~n~~~~~ 355 (527)
+ .++|++. +||+|+||+|.+ ..|+|.+.+ +||+|+||++.++.. + |++++ ..+||+|+||++..
T Consensus 371 ~~~nTDGIDi~--~NV~I~nc~I~~-----gDDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~ 442 (574)
T 1ogo_X 371 FFFQTDGPEIY--PNSVVHDVFWHV-----NDDAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIH 442 (574)
T ss_dssp CSTTCCCCBCC--TTCEEEEEEEEE-----SSCSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEE
T ss_pred CCCCCccCccc--CCEEEEeeEEEC-----CCCEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEEC
Confidence 4 3468988 999999999998 468998886 999999999998764 4 88875 47999999999865
Q ss_pred CC---------cccccccCCC------CccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeeeeEeee------
Q 009748 356 GH---------GISIGSLGKD------NTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSE------ 414 (527)
Q Consensus 356 g~---------GI~IGs~g~~------~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~------ 414 (527)
.+ +..||++.-+ .....| ||+|+|++|.+..+++ |...+ .+.|+||+|+||++++
T Consensus 443 ~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~gV-NI~f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~NI~i~g~~~~~~ 518 (574)
T 1ogo_X 443 TRYIKSETVVPSAIIGASPFYASGMSPDSRKSI-SMTVSNVVCEGLCPSL-FRITP--LQNYKNFVVKNVAFPDGLQTNS 518 (574)
T ss_dssp CCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEE-EEEEEEEEECSSBCEE-EEECC--SEEEEEEEEEEEEETTCBCCST
T ss_pred CcccceeccccceeeccccccccccccCCCceE-EEEEEeEEEEceeEee-EEECC--CCCEEEEEEEeEEEeCcccccc
Confidence 33 2223333211 112228 9999999999988875 44433 3579999999999876
Q ss_pred eee-cEEEeeeeecCCccccccceEEeeceeeeEeeeeEE
Q 009748 415 VQL-PIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYT 453 (527)
Q Consensus 415 v~~-pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~ 453 (527)
... +..+... . ..++||+|+||++...
T Consensus 519 ~~~~~~~i~G~-----------~-~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 519 IGTGESIIPAA-----------S-GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp TCTTCEEECCC-----------T-TCCEEEEEEEEEETTE
T ss_pred ccccceeEecC-----------C-CccceEEEEeEEEeCE
Confidence 111 1112110 1 3589999999987643
No 32
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.47 E-value=2.7e-13 Score=145.01 Aligned_cols=158 Identities=13% Similarity=0.112 Sum_probs=122.3
Q ss_pred eeeeeEEEEEE----EEecC-----CcceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCceeE
Q 009748 268 YGSFNVTVTGI----TIQNS-----PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVS 338 (527)
Q Consensus 268 ~~~~nv~I~gi----ti~ns-----~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD~Ia 338 (527)
.+.+|++|.|- ++.-. ....+.+..|+|++|+|++|.+.+ . + ..|.+|.+. ..|++.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w---~---i--h~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK---T---I--FASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS---C---B--SCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc---e---E--eeceeeeee------cCCCce
Confidence 67889999986 44322 122478899999999999999732 1 2 234444443 357777
Q ss_pred eccCCceeEEeeeccCCCC-cccccccCCCCccceeeceeEeeeeeecceeeeEEeee-----ccCcceeeeEEeeeeEe
Q 009748 339 IQTGCSNVYVHNVNCGPGH-GISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTW-----QGGSGSVQGVLFSNIQV 412 (527)
Q Consensus 339 i~sgs~NV~I~n~~~~~g~-GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~-----~g~~G~V~NI~f~Ni~v 412 (527)
+ .++||+|+||++..++ ++ |+. ....++||+|+||++.+ .+|++|+++ .+..|.|+||+|+|++|
T Consensus 172 i--~s~nV~I~n~~I~~gddgi--Gs~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~ 242 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGY--GLI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRC 242 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTC--EEE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeE--Eec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEE
Confidence 7 5799999999998865 45 332 35679999999999999 899999998 66778999999999999
Q ss_pred eeeeecEEEeeeeecCCccccccceEEeeceeeeEeeeeEEeeeeeee
Q 009748 413 SEVQLPIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYTVKPVHFA 460 (527)
Q Consensus 413 ~~v~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~~~pi~i~ 460 (527)
+++.++|.|+. ..+.++||+|+||+++....++.|.
T Consensus 243 ~nv~~~I~I~p------------~~~~isnItfeNI~~t~~~~aI~i~ 278 (464)
T 1h80_A 243 SKGLAAVMFGP------------HFMKNGDVQVTNVSSVSCGSAVRSD 278 (464)
T ss_dssp ESSSEEEEEEC------------TTCBCCCEEEEEEEEESSSCSEEEC
T ss_pred ECCceeEEEeC------------CCceEeEEEEEEEEEEccceeEEEe
Confidence 99999999972 2246899999999999766666665
No 33
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.44 E-value=4.9e-13 Score=138.82 Aligned_cols=227 Identities=12% Similarity=0.143 Sum_probs=138.5
Q ss_pred CCcceeeecc----cccCCCCCcchHHHHHHHHhccc-------ceeeeEEecCceeEE-EeeeccccccccceEEEEec
Q 009748 106 HSSVFNVKDF----GAKGNGVSDDTKAFEAAWAAACK-------VEASIMVVPAESVFL-VGPMSFSGPYCQANIIFQLD 173 (527)
Q Consensus 106 ~~~~~~V~~~----GA~~dg~tDdt~Aiq~Ai~~a~~-------~gg~~V~iP~G~~yl-~~~l~l~g~~~~sni~l~~~ 173 (527)
....|||++| +|++|+.+|++++|+++|+++.+ ..|++|+||+| +|. .+++.+. ++.++|..+
T Consensus 11 ~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G-~Y~l~g~ivId----kp~LtL~G~ 85 (410)
T 2inu_A 11 SPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPG-DYDLHTQVVVD----VSYLTIAGF 85 (410)
T ss_dssp -CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSE-EEEECSCEEEC----CTTEEEECS
T ss_pred cCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCC-eeccCCcEEEe----cCcEEEEec
Confidence 5679999999 89999999999999999998763 45899999999 775 5899885 344888876
Q ss_pred c--e----EEccCCCcc----cccceeeeEEe----------e-----eeeceEEeeceEeeCCceeeeecCCCCCCCCC
Q 009748 174 G--T----IIAPTGSKD----WGKGLLWWLDF----------T-----KLKGITIQGKGIIDGRGSVWWQDYPYDDPIDD 228 (527)
Q Consensus 174 G--t----l~~~~~~~~----~~~~~~~~i~~----------~-----~~~nI~I~G~G~IdG~G~~ww~~~~~~~~~~~ 228 (527)
+ + |..-..... |+++..-.+.. . .+++|+|.| -+|+|---.-|..
T Consensus 86 ~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~--------- 155 (410)
T 2inu_A 86 GHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKN--------- 155 (410)
T ss_dssp CCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTT---------
T ss_pred CCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCC---------
Confidence 4 3 221111112 44332222211 1 124455554 3344331000000
Q ss_pred CccEeEecCCCCCCCCCCCcccccccCCCCCCCcceEEEee-eeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCC
Q 009748 229 ESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYG-SFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPG 307 (527)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~~-~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~ 307 (527)
.+ ...-.+|.+.. +++++|+++.|.+. .++|.+..+++++|++..|..
T Consensus 156 -----------------------s~-----~~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-- 204 (410)
T 2inu_A 156 -----------------------SY-----HNGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-- 204 (410)
T ss_dssp -----------------------SC-----CCSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES--
T ss_pred -----------------------Cc-----ccCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe--
Confidence 00 01123666665 78889999999874 688999999999999999984
Q ss_pred CCCCCCceeeec-ccceEEEecccccCCce--eEeccCCceeEEeeecc-CCCC-cccccccCCCCccceeeceeEeeee
Q 009748 308 DSPNTDGIHLQN-SKDVLIHTSNLACGDDC--VSIQTGCSNVYVHNVNC-GPGH-GISIGSLGKDNTKACVSNITVRDVM 382 (527)
Q Consensus 308 ~~~ntDGI~i~~-s~nV~I~n~~i~~gDD~--Iai~sgs~NV~I~n~~~-~~g~-GI~IGs~g~~~~~~~v~nI~v~Ni~ 382 (527)
...||++++ ++...|+++.+..++|| |.+.. +++.+|+++.+ ..++ ||-+-. ..+..|+++.
T Consensus 205 ---~GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~n-s~~~~I~~N~i~~~~R~gIh~m~---------s~~~~i~~N~ 271 (410)
T 2inu_A 205 ---CGNCVELTGAGQATIVSGNHMGAGPDGVTLLAEN-HEGLLVTGNNLFPRGRSLIEFTG---------CNRCSVTSNR 271 (410)
T ss_dssp ---SSEEEEECSCEESCEEESCEEECCTTSEEEEEES-EESCEEESCEECSCSSEEEEEES---------CBSCEEESCE
T ss_pred ---cCCceeeccccccceEecceeeecCCCCEEEEEe-CCCCEEECCCcccCcceEEEEEc---------cCCCEEECCE
Confidence 335677766 66677777777766666 54444 45556665544 3232 444421 2344455555
Q ss_pred eecceeeeE
Q 009748 383 MHNTMNGVR 391 (527)
Q Consensus 383 i~~~~~Gi~ 391 (527)
+.+...|+.
T Consensus 272 f~~~~~Gi~ 280 (410)
T 2inu_A 272 LQGFYPGML 280 (410)
T ss_dssp EEESSSCSE
T ss_pred EecceeEEE
Confidence 555444443
No 34
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.29 E-value=1.2e-10 Score=127.07 Aligned_cols=187 Identities=17% Similarity=0.127 Sum_probs=115.7
Q ss_pred ceeeecc------eeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccC-----CceeEeccCCceeEEeeeccC
Q 009748 286 CHLKFDN------CIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACG-----DDCVSIQTGCSNVYVHNVNCG 354 (527)
Q Consensus 286 ~~i~~~~------c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~g-----DD~Iai~sgs~NV~I~n~~~~ 354 (527)
++++++. |+||+|+||+|.+. ..|||.+.+|+||+|+||++... ..+|.++++++||+|+||++.
T Consensus 169 DGid~DGi~fd~~S~NV~I~Nc~I~~t----GDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~ 244 (609)
T 3gq8_A 169 YPYLGDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSK 244 (609)
T ss_dssp CCCCCTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEE
T ss_pred ccccCCCccccccceeEEEEeeEEEec----CCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEE
Confidence 4456666 99999999999642 45899998899999999999433 468888888899999999988
Q ss_pred C-CCcccccccCCCCccceeeceeEeeeeeecce--eeeEEeeecc----CcceeeeEEeeeeEeeeee-----------
Q 009748 355 P-GHGISIGSLGKDNTKACVSNITVRDVMMHNTM--NGVRIKTWQG----GSGSVQGVLFSNIQVSEVQ----------- 416 (527)
Q Consensus 355 ~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~--~Gi~Ikt~~g----~~G~V~NI~f~Ni~v~~v~----------- 416 (527)
. ..||.|++.+ +.+.++||+|+|+...+.. ..++.--... ......||++.|++.....
T Consensus 245 nt~~GIrIKt~~---~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~ 321 (609)
T 3gq8_A 245 GCYGGIEIKAHG---DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATP 321 (609)
T ss_dssp SSSEEEEEEECT---TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCC
T ss_pred CCCCEEEEEecC---CCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCc
Confidence 7 4589888753 3456889998886554432 3444322111 2246788888888775432
Q ss_pred ecEEEe--------ee--eecCCccccccceE----EeeceeeeEeeeeEEe---eeeeeeecCCCceeeeeeeeEeecc
Q 009748 417 LPIVID--------QF--YCDKSTCKNQTSAV----ALSGITYERVKGTYTV---KPVHFACSDSLPCVDVTLSVIELKP 479 (527)
Q Consensus 417 ~pi~I~--------~~--y~~~~~~~~~~~~~----~i~nItf~NI~gt~~~---~pi~i~c~~~~~~~~I~f~nV~v~~ 479 (527)
.++++. .+ +.+...... .+.+ .-+||++.||.+++-. ..+++.+- ...++.|.++|++|..
T Consensus 322 r~l~vs~~~~v~i~~~~~~~d~~y~~~-~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg-~~~~~~v~i~n~~i~~ 399 (609)
T 3gq8_A 322 RVLAVSAYYGVVINGLTGYTDDPNLLT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGG-SRGGDAVNISNVTLNN 399 (609)
T ss_dssp EEEEEESCEEEEEEEEEEECSCTTSCC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCC-CCTTCCEEEEEEEEES
T ss_pred ceEEEEcCCCeEEcCceEccCCccccC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCC-CCcCCeEEEeccEEee
Confidence 122222 21 122111111 1222 2367777777766432 34555443 3356667777776655
Q ss_pred hh
Q 009748 480 VQ 481 (527)
Q Consensus 480 ~~ 481 (527)
..
T Consensus 400 s~ 401 (609)
T 3gq8_A 400 SG 401 (609)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 35
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.28 E-value=1.4e-10 Score=128.37 Aligned_cols=122 Identities=18% Similarity=0.158 Sum_probs=82.5
Q ss_pred ceeeecc------eeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccC-----CceeEeccCCceeEEeeeccC
Q 009748 286 CHLKFDN------CIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACG-----DDCVSIQTGCSNVYVHNVNCG 354 (527)
Q Consensus 286 ~~i~~~~------c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~g-----DD~Iai~sgs~NV~I~n~~~~ 354 (527)
++++.+. |+||+|+||.|.+. ..|+|.+.+|+||+|+||++... ..+|.++++++||+|+||++.
T Consensus 169 DGid~DGi~fdi~S~NV~I~Nc~I~nt----GDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~ 244 (772)
T 3gqn_A 169 YPYLGDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSK 244 (772)
T ss_dssp CCCCCTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEE
T ss_pred CcCCCcCcccccccceEEEEeeEEEec----CcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEE
Confidence 3455565 89999999999652 45889988889999999998433 468888888889999999887
Q ss_pred C-CCcccccccCCCCccceeeceeEeeeeee-cc-eeeeEEeeecc----CcceeeeEEeeeeEeee
Q 009748 355 P-GHGISIGSLGKDNTKACVSNITVRDVMMH-NT-MNGVRIKTWQG----GSGSVQGVLFSNIQVSE 414 (527)
Q Consensus 355 ~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~-~~-~~Gi~Ikt~~g----~~G~V~NI~f~Ni~v~~ 414 (527)
. ..||.|++.+ +.+.++||+|.|+... +. ..+++..-... ..-...||.+.|++...
T Consensus 245 nT~nGIRIKt~~---~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~ 308 (772)
T 3gqn_A 245 GCYGGIEIKAHG---DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIR 308 (772)
T ss_dssp SSSEEEEECCCT---TSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEES
T ss_pred CCCcEEEEEEeC---CCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEc
Confidence 7 4578888654 3456888888864443 32 12333211110 11256777777777643
No 36
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.27 E-value=1.5e-10 Score=125.80 Aligned_cols=207 Identities=12% Similarity=-0.017 Sum_probs=139.2
Q ss_pred eEEE---eeeeeEEEEEEE----EecCC-cceeeecceeEEEEEEeeecCCCCCCCCCceee-eccc--ceEEEeccccc
Q 009748 264 ALRF---YGSFNVTVTGIT----IQNSP-QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHL-QNSK--DVLIHTSNLAC 332 (527)
Q Consensus 264 ~i~~---~~~~nv~I~git----i~ns~-~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i-~~s~--nV~I~n~~i~~ 332 (527)
.+++ ..|+||+|+|++ |.+++ .++| |+|+||.|.+ ..|+|.+ .+.. ++.++ .+..
T Consensus 200 ~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~t-----GDDCIAI~KSGs~~ni~~e--~~~~ 265 (600)
T 2x6w_A 200 AITLGWNGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSG-----VESCYFSMSSSFARNIACS--VQLH 265 (600)
T ss_dssp SEEECBTTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEE-----EESCEEECCCTTHHHHEEE--EEEC
T ss_pred EEEeCCCCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEec-----CCcEEEEecCCCcCCeEEE--EEcC
Confidence 4677 899999999999 77633 2344 9999999997 4689999 6543 46777 5667
Q ss_pred CCceeEecc----CCceeEEeeeccCCCCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeec--cCcceeeeEE
Q 009748 333 GDDCVSIQT----GCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQ--GGSGSVQGVL 406 (527)
Q Consensus 333 gDD~Iai~s----gs~NV~I~n~~~~~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~--g~~G~V~NI~ 406 (527)
++.+|++++ +.+||+|+| ++. +.. +.++.++||+|+|++|.+...++.+.... ...+.|+||+
T Consensus 266 GHgGISIGSe~~ggV~NV~V~N-rIK--------t~~--G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnIt 334 (600)
T 2x6w_A 266 QHDTFYRGSTVNGYCRGAYVVM-HAA--------EAA--GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVI 334 (600)
T ss_dssp SSSEEEESCEEEEESEEEEEEE-CGG--------GCT--TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEE
T ss_pred CCCcEEecccccCcEEEEEEEE-EEE--------eec--CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEE
Confidence 788999987 478999999 333 221 13478999999999999998888887642 2346899999
Q ss_pred eeeeEeeeeee-------cEEEeeeeecCCccccccceEEeeceeeeEeeeeEEe-----eeeeeeecCCCceeeeeeee
Q 009748 407 FSNIQVSEVQL-------PIVIDQFYCDKSTCKNQTSAVALSGITYERVKGTYTV-----KPVHFACSDSLPCVDVTLSV 474 (527)
Q Consensus 407 f~Ni~v~~v~~-------pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI~gt~~~-----~pi~i~c~~~~~~~~I~f~n 474 (527)
|+||+.+.... +.+|... ...|.+ .....|++|+|+|++..... ..+.+ .+.+++|+|.+
T Consensus 335 fkNItgTsas~aav~~~~g~~i~g~---p~~~~~-~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~ 406 (600)
T 2x6w_A 335 VSGNIVSIGERAAFSAPFGAFIDIG---PDNSGA-SNVQDIQRVLVTGNSFYAPANITDSAAITL----RANLNGCTFIA 406 (600)
T ss_dssp EESCEEEECSCCTTSSSCEEEEEEC---CCTTCC-SSSCCEEEEEEESCEEECCTTCSSEEEEEE----CSCBSCEEEES
T ss_pred EEeEEEEeccccccccccceEEEec---Cccccc-ccccceeEEEEeceEEEcCCccCCCcceee----eccccceEEec
Confidence 99999986532 2444432 222322 24467999999999875321 12222 35677888887
Q ss_pred Ee--ec---chhhhhcccC-----chhhhhcccCCCCCC
Q 009748 475 IE--LK---PVQERYHMYD-----PYCWQAFGESTTPTH 503 (527)
Q Consensus 475 V~--v~---~~~~~~~~~~-----~~c~~v~g~~~~~~~ 503 (527)
=. +. .+.++-+++. |-=+|++|..++.+.
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (600)
T 2x6w_A 407 NNFDCRYMVYNAPGTTSPVVQNLVWDKSNVIGGTHANQR 445 (600)
T ss_dssp CEEESSEEEECCTTSCCCEEECEEECTTCEECCTTTTCC
T ss_pred CccceeeEEEeCCCCCchhheeccCCccceEeccccccc
Confidence 55 32 2222222221 445677776654443
No 37
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.27 E-value=9.5e-11 Score=121.96 Aligned_cols=137 Identities=9% Similarity=0.118 Sum_probs=106.2
Q ss_pred eEEEeeeeeEEEEEEEEecCCcceeeecc-eeEEEEEEeeecCCCCCCCCCceee--------ecccceEEEeccccc-C
Q 009748 264 ALRFYGSFNVTVTGITIQNSPQCHLKFDN-CIGVVVHDVSVSSPGDSPNTDGIHL--------QNSKDVLIHTSNLAC-G 333 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns~~~~i~~~~-c~nV~I~nv~I~s~~~~~ntDGI~i--------~~s~nV~I~n~~i~~-g 333 (527)
.|.+..|++.+|++.++.+...++|++.. |++++|++..+.. +.||+.+ ..+.+++|+++.+.. .
T Consensus 174 GI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~-----~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~ 248 (377)
T 2pyg_A 174 GFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG-----NGSSGLVVQRGLEDLALPSNILIDGGAYYDNA 248 (377)
T ss_dssp SEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES-----CSSCSEEEECCSSCCCCCEEEEEESCEEESCS
T ss_pred ceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC-----ccCceEEEeccccCCCCCccEEEECCEEEcCc
Confidence 57788899999999877777788999877 9999999999997 5678877 678999999999875 4
Q ss_pred CceeEeccCCceeEEeeeccCC--CCcccccccCCCCccceeeceeEeeeeeeccee-----eeEEeeeccCcce-----
Q 009748 334 DDCVSIQTGCSNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNITVRDVMMHNTMN-----GVRIKTWQGGSGS----- 401 (527)
Q Consensus 334 DD~Iai~sgs~NV~I~n~~~~~--g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~-----Gi~Ikt~~g~~G~----- 401 (527)
..+|.+.. +++++|+++++.. ..||.|. ..++++|+|++|.+... .+.+..+.+..+.
T Consensus 249 ~~Gi~~~~-~~~v~i~~N~i~~~~~~GI~i~---------g~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~~~~~ 318 (377)
T 2pyg_A 249 REGVLLKM-TSDITLQNADIHGNGSSGVRVY---------GAQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGASGTYY 318 (377)
T ss_dssp SCSEEEEE-EEEEEEESCEEESCSSCSEEEE---------EEEEEEEESCEEESCCSSSSCCSEEEECEEETTSSSCEEE
T ss_pred cCceEecc-ccCeEEECCEEECCCCceEEEe---------cCCCcEEECcEEECCcccccccceEEEEecCCCccceeee
Confidence 66788876 7999999999976 4688885 27899999999987643 2333333222221
Q ss_pred -eeeEEeeeeEeeee
Q 009748 402 -VQGVLFSNIQVSEV 415 (527)
Q Consensus 402 -V~NI~f~Ni~v~~v 415 (527)
-++++++++++++.
T Consensus 319 ~~~~~~i~~N~i~g~ 333 (377)
T 2pyg_A 319 TTLNTRIEGNTISGS 333 (377)
T ss_dssp CCBCCEEESCEEECC
T ss_pred eccCeEEECCEEECc
Confidence 37888999988874
No 38
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.83 E-value=7.1e-08 Score=101.51 Aligned_cols=145 Identities=14% Similarity=0.102 Sum_probs=97.6
Q ss_pred eEEEeeeeeEEEEEEEEecCCcceeeecce-eEEEEEEeeecCCCC----CCCCCceeeecc--cceEEEecccc-cCCc
Q 009748 264 ALRFYGSFNVTVTGITIQNSPQCHLKFDNC-IGVVVHDVSVSSPGD----SPNTDGIHLQNS--KDVLIHTSNLA-CGDD 335 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns~~~~i~~~~c-~nV~I~nv~I~s~~~----~~ntDGI~i~~s--~nV~I~n~~i~-~gDD 335 (527)
+|.+.. .+.+|++++|.+....+|.+... .+.+|++++|....+ ..+.|||.+..+ ++.+|++|++. +.||
T Consensus 131 GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~dd 209 (400)
T 1ru4_A 131 GAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDD 209 (400)
T ss_dssp SEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSC
T ss_pred cEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCC
Confidence 455554 67789999999887667888764 388888999986543 246799988643 78899999986 5788
Q ss_pred eeEeccCCceeEEeeeccCC--------------CCcccccccCCCCccceeeceeEeeeeeecc-eeeeEEeeeccCcc
Q 009748 336 CVSIQTGCSNVYVHNVNCGP--------------GHGISIGSLGKDNTKACVSNITVRDVMMHNT-MNGVRIKTWQGGSG 400 (527)
Q Consensus 336 ~Iai~sgs~NV~I~n~~~~~--------------g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~-~~Gi~Ikt~~g~~G 400 (527)
+|.+......|+|+||.... +.||.+|+++ ...+.+|+||...+. ..|+......
T Consensus 210 Gidl~~~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~------~~~~~~v~nn~a~~N~~~G~~~n~~~---- 279 (400)
T 1ru4_A 210 GFDLFDSPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQ------AVGNHRITRSVAFGNVSKGFDQNNNA---- 279 (400)
T ss_dssp SEECTTCCSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTT------CCCCCEEESCEEESCSSEEEECTTCS----
T ss_pred cEEEEecCCCEEEEeEEEECCccccccccccccCCCCEEEeccC------CcCCEEEEeeEEECCcCcCEeecCCC----
Confidence 99987656779999997632 3467776542 345677888877654 4577543221
Q ss_pred eeeeEEeeeeEeeeeeecEEE
Q 009748 401 SVQGVLFSNIQVSEVQLPIVI 421 (527)
Q Consensus 401 ~V~NI~f~Ni~v~~v~~pi~I 421 (527)
.+++++|.++.+-...+.+
T Consensus 280 --~~~~i~nNt~~~N~~~~~~ 298 (400)
T 1ru4_A 280 --GGVTVINNTSYKNGINYGF 298 (400)
T ss_dssp --SCCEEESCEEESSSEEEEE
T ss_pred --CCEEEECeEEECCccceEE
Confidence 2355555555443334444
No 39
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=98.70 E-value=1.4e-08 Score=112.74 Aligned_cols=66 Identities=26% Similarity=0.400 Sum_probs=55.1
Q ss_pred CCCcceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEE-eeeccccccccceEEEEecc--eEEc
Q 009748 105 HHSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLV-GPMSFSGPYCQANIIFQLDG--TIIA 178 (527)
Q Consensus 105 ~~~~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~-~~l~l~g~~~~sni~l~~~G--tl~~ 178 (527)
.....+||+||||+|||+||||+|||+||++|. ++.+||||+| +|++ ++|.+ ++++.|..++ +|++
T Consensus 396 ~~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa~--~g~~v~~P~G-~Y~vt~Ti~i-----p~~~~ivG~~~~~I~~ 464 (758)
T 3eqn_A 396 APSDFVSVRSQGAKGDGHTDDTQAIKNVFAKYA--GCKIIFFDAG-TYIVTDTIQI-----PAGTQIVGEVWSVIMG 464 (758)
T ss_dssp CGGGEEETTTTTCCCEEEEECHHHHHHHHHHHT--TTSEEECCSE-EEEESSCEEE-----CTTCEEECCSSEEEEE
T ss_pred cccceEEeeeccccCCCCchhHHHHHHHHHHhc--CCCEEEECCC-EeEECCeEEc-----CCCCEEEecccceEec
Confidence 345799999999999999999999999999553 4789999999 6766 57888 5688888775 5665
No 40
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.35 E-value=5.4e-06 Score=89.54 Aligned_cols=118 Identities=5% Similarity=-0.120 Sum_probs=71.0
Q ss_pred eeeEEEEEEEEecCCcc-eeee--------cceeEEEEEEeeecCCCCCCCCC----ceeeec-------ccceEEEecc
Q 009748 270 SFNVTVTGITIQNSPQC-HLKF--------DNCIGVVVHDVSVSSPGDSPNTD----GIHLQN-------SKDVLIHTSN 329 (527)
Q Consensus 270 ~~nv~I~giti~ns~~~-~i~~--------~~c~nV~I~nv~I~s~~~~~ntD----GI~i~~-------s~nV~I~n~~ 329 (527)
.++++|++++|.+...- .+.+ ...++.+|+++.|.......... ||++.. +.+.+|+++.
T Consensus 125 G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~ 204 (506)
T 1dbg_A 125 GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCF 204 (506)
T ss_dssp SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCE
T ss_pred cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcE
Confidence 47788888888875321 0222 14566688888888753333333 777775 3588899998
Q ss_pred cccC------CceeEecc---CCceeEEeeeccCCCC-cccccccCCCCccceeeceeEeeeeeecceeeeEEee
Q 009748 330 LACG------DDCVSIQT---GCSNVYVHNVNCGPGH-GISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKT 394 (527)
Q Consensus 330 i~~g------DD~Iai~s---gs~NV~I~n~~~~~g~-GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt 394 (527)
|... -+.|.++. .+++.+|+++.+...+ |..|-+. .-.+.+|+++++.++..+|.+..
T Consensus 205 f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~s-------kS~~n~i~~N~~~~~~ggi~l~~ 272 (506)
T 1dbg_A 205 FSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITS-------KSQENVYYGNTYLNCQGTMNFRH 272 (506)
T ss_dssp EEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEEEEE-------ESBSCEEESCEEESCSSEEEEEE
T ss_pred EcccccCCCccccEEEEEEecccCCcEEECCEEEeccCcEEEEEE-------ecCCEEEECCEEEcccCcEEEee
Confidence 8742 34455542 2468888888776533 2333110 11246788888887766665544
No 41
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.27 E-value=4.5e-06 Score=86.09 Aligned_cols=106 Identities=15% Similarity=0.158 Sum_probs=79.9
Q ss_pred ceeeecceeEEEEEEeeecCCC------------------CCCCCCceeeecccceEEEecccccCCcee-EeccCCcee
Q 009748 286 CHLKFDNCIGVVVHDVSVSSPG------------------DSPNTDGIHLQNSKDVLIHTSNLACGDDCV-SIQTGCSNV 346 (527)
Q Consensus 286 ~~i~~~~c~nV~I~nv~I~s~~------------------~~~ntDGI~i~~s~nV~I~n~~i~~gDD~I-ai~sgs~NV 346 (527)
.+|.+..++||.|+|++|+... .....|||.+.+++||+|++|++..+.|++ .++.++++|
T Consensus 106 ~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~v 185 (346)
T 1pxz_A 106 PCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGI 185 (346)
T ss_dssp CCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEE
T ss_pred ceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeeccCcceE
Confidence 5788889999999999998531 125789999999999999999999887776 676679999
Q ss_pred EEeeeccCC-CCcccccccCCCCccceeeceeEeeeee-ecce-eeeEE
Q 009748 347 YVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMM-HNTM-NGVRI 392 (527)
Q Consensus 347 ~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i-~~~~-~Gi~I 392 (527)
+|+||.+.. ..++-+|+.-.. ......+|+|+++.+ .+.. +..++
T Consensus 186 TISnn~f~~H~k~~l~G~sd~~-~~d~~~~vT~~~N~f~~~~~~R~Pr~ 233 (346)
T 1pxz_A 186 TISNNHFFNHHKVMLLGHDDTY-DDDKSMKVTVAFNQFGPNAGQRMPRA 233 (346)
T ss_dssp EEESCEEESEEEEEEESCCSSC-GGGGGCEEEEESCEECSSEEECTTEE
T ss_pred EEEeeEEecCCceeEECCCCcc-ccCCceEEEEEeeEEeCCccccCccE
Confidence 999999986 336777764211 112235889999988 5543 34444
No 42
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.27 E-value=5.7e-06 Score=84.85 Aligned_cols=107 Identities=20% Similarity=0.241 Sum_probs=77.3
Q ss_pred ceeeecceeEEEEEEeeecCCC--CCC-----CCCceeeecccceEEEecccccC-CceeEeccCCceeEEeeeccCCC-
Q 009748 286 CHLKFDNCIGVVVHDVSVSSPG--DSP-----NTDGIHLQNSKDVLIHTSNLACG-DDCVSIQTGCSNVYVHNVNCGPG- 356 (527)
Q Consensus 286 ~~i~~~~c~nV~I~nv~I~s~~--~~~-----ntDGI~i~~s~nV~I~n~~i~~g-DD~Iai~sgs~NV~I~n~~~~~g- 356 (527)
.+|.+..++||.|+|++|+... +.+ ..|+|.+..++||+|++|.+..+ |..+.++.++.+|+|+||.|...
T Consensus 83 ~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~ 162 (340)
T 3zsc_A 83 GGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHD 162 (340)
T ss_dssp EEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCS
T ss_pred CceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCc
Confidence 4566677899999999999642 112 78999999999999999999876 44588887899999999999863
Q ss_pred CcccccccCCCC--ccceeeceeEeeeeeecce-eeeEE
Q 009748 357 HGISIGSLGKDN--TKACVSNITVRDVMMHNTM-NGVRI 392 (527)
Q Consensus 357 ~GI~IGs~g~~~--~~~~v~nI~v~Ni~i~~~~-~Gi~I 392 (527)
.++-+|+.-... ....-.+|+|.++.+.+.. +.-++
T Consensus 163 k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~ 201 (340)
T 3zsc_A 163 KVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRI 201 (340)
T ss_dssp BCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEE
T ss_pred eeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCcc
Confidence 356676531100 0011357999999887653 33444
No 43
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.27 E-value=7.4e-06 Score=84.69 Aligned_cols=120 Identities=18% Similarity=0.315 Sum_probs=84.1
Q ss_pred eeeEEEEEE----EEecCCcceeeecceeEEEEEEeeecCCCC-----------CCCCCceeeecccceEEEecccccC-
Q 009748 270 SFNVTVTGI----TIQNSPQCHLKFDNCIGVVVHDVSVSSPGD-----------SPNTDGIHLQNSKDVLIHTSNLACG- 333 (527)
Q Consensus 270 ~~nv~I~gi----ti~ns~~~~i~~~~c~nV~I~nv~I~s~~~-----------~~ntDGI~i~~s~nV~I~n~~i~~g- 333 (527)
..|.+|.|. +|.+ .+|.+..++||.|+|++|+...+ ..+.|+|.+.+++||+|++|++..+
T Consensus 79 ~sn~TI~G~G~~~~i~g---~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~ 155 (355)
T 1pcl_A 79 PSNTTIIGVGSNGKFTN---GSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGS 155 (355)
T ss_pred CCCeEEEEecCCeEEec---CEEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccc
Confidence 356666663 3332 35777788999999999985421 1347999999999999999999864
Q ss_pred -----------------CceeEeccCCceeEEeeeccCCC-CcccccccCCCC-ccceeeceeEeeeeeecce-eeeEE
Q 009748 334 -----------------DDCVSIQTGCSNVYVHNVNCGPG-HGISIGSLGKDN-TKACVSNITVRDVMMHNTM-NGVRI 392 (527)
Q Consensus 334 -----------------DD~Iai~sgs~NV~I~n~~~~~g-~GI~IGs~g~~~-~~~~v~nI~v~Ni~i~~~~-~Gi~I 392 (527)
|..+.++.++.+|+|++|.|... .++-||+.-... ......+|+|.++.+.++. +.-++
T Consensus 156 ~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Prv 234 (355)
T 1pcl_A 156 FTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRV 234 (355)
T ss_pred cCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCce
Confidence 55677877889999999999873 357777642111 0112357999999998763 34444
No 44
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.27 E-value=8.3e-06 Score=83.29 Aligned_cols=155 Identities=15% Similarity=0.199 Sum_probs=102.0
Q ss_pred eeeEEEEEE----EEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeec-ccceEEEeccccc----------CC
Q 009748 270 SFNVTVTGI----TIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQN-SKDVLIHTSNLAC----------GD 334 (527)
Q Consensus 270 ~~nv~I~gi----ti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~-s~nV~I~n~~i~~----------gD 334 (527)
..|++|.|. +|. ..+|.+..++||.|+|++|+... ....|+|.+.. ++||+|++|++.. .|
T Consensus 78 ~sn~TI~G~g~~~~i~---G~gl~i~~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~D 153 (326)
T 3vmv_A 78 IKNISIIGVGTNGEFD---GIGIRLSNAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYD 153 (326)
T ss_dssp EEEEEEEECTTCCEEE---SCCEEEESEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSC
T ss_pred CCCeEEEecCCCeEEe---CcEEEEEecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccC
Confidence 356677664 233 34677888999999999999643 45789999997 9999999999952 36
Q ss_pred ceeEeccCCceeEEeeeccCC-CCcccccccCCCCccceeeceeEeeeeeecce-eeeEEeeeccCcceeeeEEeeeeEe
Q 009748 335 DCVSIQTGCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTM-NGVRIKTWQGGSGSVQGVLFSNIQV 412 (527)
Q Consensus 335 D~Iai~sgs~NV~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~-~Gi~Ikt~~g~~G~V~NI~f~Ni~v 412 (527)
..+.++.++.+|+|.||.|.. ..++-||+.-. ....-.+|+|.++.+.++. +.-+++. +...+-|-.|+|...
T Consensus 154 gl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~--~~~~~~~vT~~~N~f~~~~~R~Pr~r~---G~~Hv~NN~~~n~~~ 228 (326)
T 3vmv_A 154 GLVDMKRNAEYITVSWNKFENHWKTMLVGHTDN--ASLAPDKITYHHNYFNNLNSRVPLIRY---ADVHMFNNYFKDIND 228 (326)
T ss_dssp CSEEECTTCEEEEEESCEEEEEEECEEECSSSC--GGGCCEEEEEESCEEEEEEECTTEEES---CEEEEESCEEEEESS
T ss_pred cceEecCCCceEEEEceEEecCceEEEECCCCC--CcccCccEEEEeeEecCCcCcCCcccC---CcEEEEccEEECCCc
Confidence 678888889999999999986 33677775311 1111247899988887653 2334431 222333444444322
Q ss_pred eeeeecEEEeeeeecCCccccccceEEeeceeeeEe
Q 009748 413 SEVQLPIVIDQFYCDKSTCKNQTSAVALSGITYERV 448 (527)
Q Consensus 413 ~~v~~pi~I~~~y~~~~~~~~~~~~~~i~nItf~NI 448 (527)
+++... ..+.+.+++=.|++.
T Consensus 229 ----~~~~~~-----------~~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 229 ----TAINSR-----------VGARVFVENNYFDNV 249 (326)
T ss_dssp ----CSEEEE-----------TTCEEEEESCEEEEE
T ss_pred ----eEEeec-----------CCcEEEEEceEEECC
Confidence 333221 134577888888887
No 45
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.26 E-value=8.8e-06 Score=83.42 Aligned_cols=117 Identities=15% Similarity=0.231 Sum_probs=82.1
Q ss_pred EeeeeeEEEEEEEEecCC--cceeeec-ceeEEEEEEeeecCCCCCCCCCceeee-----cccceEEEecccccC-----
Q 009748 267 FYGSFNVTVTGITIQNSP--QCHLKFD-NCIGVVVHDVSVSSPGDSPNTDGIHLQ-----NSKDVLIHTSNLACG----- 333 (527)
Q Consensus 267 ~~~~~nv~I~giti~ns~--~~~i~~~-~c~nV~I~nv~I~s~~~~~ntDGI~i~-----~s~nV~I~n~~i~~g----- 333 (527)
+.-..|++|.|- +.. ..+|.+. .++||.|+|++|+........|+|.+. .++||+|++|++..+
T Consensus 68 l~v~sn~TI~G~---~a~i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~ 144 (330)
T 2qy1_A 68 IKNKSDVTIKGA---NGSAANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCS 144 (330)
T ss_dssp EESCCSEEEEEC---TTCBBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCT
T ss_pred EEcCCCeEEECC---CcEEeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccc
Confidence 333567777552 222 3568887 899999999999964322468999999 599999999999532
Q ss_pred -------CceeEeccCCceeEEeeeccCC-CCcccccccCCCCccceeeceeEeeeeeecce
Q 009748 334 -------DDCVSIQTGCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTM 387 (527)
Q Consensus 334 -------DD~Iai~sgs~NV~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~ 387 (527)
|..+.++.++.+|+|+||.|.. ..++-+|+.-... .....+|+|.++.+.+..
T Consensus 145 ~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~-~~~~~~vT~h~N~f~~~~ 205 (330)
T 2qy1_A 145 GAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDT-KNSAARTTYHHNRFENVE 205 (330)
T ss_dssp TCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCG-GGGGCEEEEESCEEEEEE
T ss_pred cCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccc-cCCCceEEEECcEEcCCC
Confidence 5557788789999999999975 2356676531111 111358999999887653
No 46
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.24 E-value=3e-05 Score=80.13 Aligned_cols=113 Identities=20% Similarity=0.188 Sum_probs=78.6
Q ss_pred eEEEeeeeeEEEEEEEEecCC---------------cceeeecceeEEEEEEeeecCCCC---------CC---CCCc-e
Q 009748 264 ALRFYGSFNVTVTGITIQNSP---------------QCHLKFDNCIGVVVHDVSVSSPGD---------SP---NTDG-I 315 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns~---------------~~~i~~~~c~nV~I~nv~I~s~~~---------~~---ntDG-I 315 (527)
.|++.+++||.|++|+|++.. .+.|.+..++||.|++|++....+ +. -.|| +
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 466778999999999998631 346899999999999999985311 00 1466 4
Q ss_pred eee-cccceEEEecccccCCceeEeccCC---------ceeEEeeeccCCC--CcccccccCCCCccceeeceeEeeeee
Q 009748 316 HLQ-NSKDVLIHTSNLACGDDCVSIQTGC---------SNVYVHNVNCGPG--HGISIGSLGKDNTKACVSNITVRDVMM 383 (527)
Q Consensus 316 ~i~-~s~nV~I~n~~i~~gDD~Iai~sgs---------~NV~I~n~~~~~g--~GI~IGs~g~~~~~~~v~nI~v~Ni~i 383 (527)
++. .+++|+|++|.|...+-+.-+++.- -+|++++|.+... +.=++. ...+++.|+.+
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~PrvR----------~G~~Hv~NN~~ 246 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVR----------FGSIHAYNNVY 246 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCcee----------cceEEEEcceE
Confidence 455 6899999999999876665555421 2699999988652 221211 11378888888
Q ss_pred ecc
Q 009748 384 HNT 386 (527)
Q Consensus 384 ~~~ 386 (527)
.+.
T Consensus 247 ~~~ 249 (355)
T 1pcl_A 247 LGD 249 (355)
T ss_pred Ecc
Confidence 654
No 47
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.24 E-value=4e-06 Score=88.33 Aligned_cols=120 Identities=16% Similarity=0.258 Sum_probs=85.8
Q ss_pred eeeEEEEEE----EEecCCcceeeecceeEEEEEEeeecCCCC---------------CCCCCceeeecccceEEEeccc
Q 009748 270 SFNVTVTGI----TIQNSPQCHLKFDNCIGVVVHDVSVSSPGD---------------SPNTDGIHLQNSKDVLIHTSNL 330 (527)
Q Consensus 270 ~~nv~I~gi----ti~ns~~~~i~~~~c~nV~I~nv~I~s~~~---------------~~ntDGI~i~~s~nV~I~n~~i 330 (527)
-.|.+|.|. +|.. .+|.+..++||.|+|++|+...+ ....|+|.+..++||+|++|+|
T Consensus 131 ~snkTI~G~G~~~~i~g---~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~ 207 (416)
T 1vbl_A 131 GSNTSIIGVGKDAKIKG---GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTF 207 (416)
T ss_dssp CSSEEEEECTTCCEEES---CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEE
T ss_pred CCCeeEEecCCCeEEec---CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEE
Confidence 467777764 3332 46777789999999999985421 1357999999999999999999
Q ss_pred ccC------------------CceeEeccCCceeEEeeeccCC-CCcccccccCCCCccceeeceeEeeeeeecce-eee
Q 009748 331 ACG------------------DDCVSIQTGCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTM-NGV 390 (527)
Q Consensus 331 ~~g------------------DD~Iai~sgs~NV~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~-~Gi 390 (527)
..+ |..+.++.++.+|+|++|.|.. ..++-||+.-.+........|+|.++.+.++. +.-
T Consensus 208 s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~P 287 (416)
T 1vbl_A 208 TDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLP 287 (416)
T ss_dssp ECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSS
T ss_pred ecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCc
Confidence 864 6667788889999999999986 33577776421111112346999999987753 444
Q ss_pred EE
Q 009748 391 RI 392 (527)
Q Consensus 391 ~I 392 (527)
++
T Consensus 288 r~ 289 (416)
T 1vbl_A 288 RV 289 (416)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 48
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.21 E-value=6.2e-06 Score=85.21 Aligned_cols=118 Identities=17% Similarity=0.139 Sum_probs=84.4
Q ss_pred eeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCC-CCCCCCceeeecccceEEEecccccC--------------C
Q 009748 270 SFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPG-DSPNTDGIHLQNSKDVLIHTSNLACG--------------D 334 (527)
Q Consensus 270 ~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~-~~~ntDGI~i~~s~nV~I~n~~i~~g--------------D 334 (527)
..|++|.|.+-. ....+|.+..++||.|+|++|+... .....|+|.+..++||+|++|.+..+ |
T Consensus 88 ~sn~TI~G~~~~-~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~D 166 (353)
T 1air_A 88 TKGITIIGANGS-SANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFE 166 (353)
T ss_dssp CSCEEEEECTTC-CBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSC
T ss_pred CCCEEEEeccCC-CCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccc
Confidence 357888885321 1245788889999999999998532 23467999999999999999999642 4
Q ss_pred ceeEeccCCceeEEeeeccCCCC-cccccccCCCCccceeeceeEeeeeeecce-eeeEE
Q 009748 335 DCVSIQTGCSNVYVHNVNCGPGH-GISIGSLGKDNTKACVSNITVRDVMMHNTM-NGVRI 392 (527)
Q Consensus 335 D~Iai~sgs~NV~I~n~~~~~g~-GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~-~Gi~I 392 (527)
..+.++.++.+|+|+||.|...+ +..+|+.-. ..+ .+|+|.++.+.+.. +.-++
T Consensus 167 Gl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~--~~g--~~vT~hhN~f~~~~~R~Pr~ 222 (353)
T 1air_A 167 SAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSS--DTG--RNITYHHNYYNDVNARLPLQ 222 (353)
T ss_dssp CSEEEESSCCEEEEESCEEEEEEECCEESSSTT--CCC--CEEEEESCEEEEEEECSCEE
T ss_pred cceeeecccCcEEEEeeEEcCCCceeEECCCcC--CCC--ceEEEEceEEcCCcCCCCCC
Confidence 45677778999999999998633 455665311 112 68999999887653 33344
No 49
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.15 E-value=8.7e-06 Score=85.36 Aligned_cols=119 Identities=14% Similarity=0.237 Sum_probs=84.8
Q ss_pred eeeEEEEEE----EEecCCcceeeecceeEEEEEEeeecCCCC---------------CCCCCceeeecccceEEEeccc
Q 009748 270 SFNVTVTGI----TIQNSPQCHLKFDNCIGVVVHDVSVSSPGD---------------SPNTDGIHLQNSKDVLIHTSNL 330 (527)
Q Consensus 270 ~~nv~I~gi----ti~ns~~~~i~~~~c~nV~I~nv~I~s~~~---------------~~ntDGI~i~~s~nV~I~n~~i 330 (527)
..|.+|.|. +|.. .+|.+.. +||.|+|++|+...+ ....|+|.+..++||+|++|++
T Consensus 126 ~snkTI~G~G~~~~i~g---~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~ 201 (399)
T 2o04_A 126 PANTTIVGSGTNAKVVG---GNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTF 201 (399)
T ss_dssp CSSEEEEESSSCCEEES---CEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEE
T ss_pred CCCceEEeccCCeEEee---CEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeee
Confidence 457777763 4442 4677777 999999999985421 1357999999999999999999
Q ss_pred ccC------------------CceeEeccCCceeEEeeeccCC-CCcccccccCCCCccceeeceeEeeeeeecce-eee
Q 009748 331 ACG------------------DDCVSIQTGCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTM-NGV 390 (527)
Q Consensus 331 ~~g------------------DD~Iai~sgs~NV~I~n~~~~~-g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~-~Gi 390 (527)
..+ |..+.++.++.+|+|+||.|.. ..++-||+.-.........+|+|.++.+.++. +.-
T Consensus 202 s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~P 281 (399)
T 2o04_A 202 NDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAP 281 (399)
T ss_dssp ECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTT
T ss_pred ecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCC
Confidence 854 6667888889999999999986 33577776421111112348999999887653 344
Q ss_pred EE
Q 009748 391 RI 392 (527)
Q Consensus 391 ~I 392 (527)
++
T Consensus 282 r~ 283 (399)
T 2o04_A 282 RV 283 (399)
T ss_dssp EE
T ss_pred Cc
Confidence 44
No 50
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.14 E-value=5e-05 Score=77.91 Aligned_cols=107 Identities=12% Similarity=0.115 Sum_probs=78.1
Q ss_pred eEEEeeeeeEEEEEEEEecC-----------CcceeeecceeEEEEEEeeecCCCCCCCCCc-eeee-cccceEEEeccc
Q 009748 264 ALRFYGSFNVTVTGITIQNS-----------PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDG-IHLQ-NSKDVLIHTSNL 330 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns-----------~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDG-I~i~-~s~nV~I~n~~i 330 (527)
.|.+.+++||.|++|+|++. ...+|.+..++||.|++|.+.. ..|| +++. .+++|+|++|.|
T Consensus 84 Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~-----~~Dg~idi~~~s~~vTISnn~f 158 (340)
T 3zsc_A 84 GLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVN-----GNDGAVDIKKYSNYITVSWNKF 158 (340)
T ss_dssp EEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEES-----CSSCSEEEETTCEEEEEESCEE
T ss_pred ceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeecc-----CCccceEEecCCceEEEECcEe
Confidence 35666788999999999874 3456999999999999999996 3566 6765 589999999999
Q ss_pred ccCCceeEeccC----------CceeEEeeeccCCC--CcccccccCCCCccceeeceeEeeeeeec
Q 009748 331 ACGDDCVSIQTG----------CSNVYVHNVNCGPG--HGISIGSLGKDNTKACVSNITVRDVMMHN 385 (527)
Q Consensus 331 ~~gDD~Iai~sg----------s~NV~I~n~~~~~g--~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~ 385 (527)
...+-+.-++.. ..+|++.++.+... +.=++. .-.+++.|+.+.+
T Consensus 159 ~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r----------~G~~Hv~NN~~~n 215 (340)
T 3zsc_A 159 VDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR----------FGMAHVFNNFYSM 215 (340)
T ss_dssp ESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEE----------SSEEEEESCEEEC
T ss_pred ccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCccc----------CCeEEEEccEEEC
Confidence 976655555542 13799999988542 111111 1146888888887
No 51
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.12 E-value=1.3e-05 Score=82.56 Aligned_cols=130 Identities=12% Similarity=0.054 Sum_probs=88.7
Q ss_pred EEEeeeeeEEEEEEEEecC----------------------CcceeeecceeEEEEEEeeecCCCCCCCCCce-ee-ecc
Q 009748 265 LRFYGSFNVTVTGITIQNS----------------------PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGI-HL-QNS 320 (527)
Q Consensus 265 i~~~~~~nv~I~giti~ns----------------------~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI-~i-~~s 320 (527)
|.+.+++||.|++|+|++. ...+|.+..+++|.|++|+|.. ..||+ ++ ..+
T Consensus 108 i~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~-----~~Dg~id~~~~s 182 (346)
T 1pxz_A 108 LFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSD-----CSDGLIDVTLGS 182 (346)
T ss_dssp EEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEEC-----CSSEEEEEESSC
T ss_pred EEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEec-----CCCCcEeeccCc
Confidence 4555677788888877753 2356888999999999999996 46887 66 589
Q ss_pred cceEEEecccccCCceeEeccC-------CceeEEeeecc-CC--CCcccccccCCCCccceeeceeEeeeeeecce-ee
Q 009748 321 KDVLIHTSNLACGDDCVSIQTG-------CSNVYVHNVNC-GP--GHGISIGSLGKDNTKACVSNITVRDVMMHNTM-NG 389 (527)
Q Consensus 321 ~nV~I~n~~i~~gDD~Iai~sg-------s~NV~I~n~~~-~~--g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~-~G 389 (527)
++|+|++|.|...+.++-+++. ..+|+++++.+ .. .+.-.+. ...++|.|+.+.+-. ++
T Consensus 183 ~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r----------~g~~hv~NN~~~~~~~~~ 252 (346)
T 1pxz_A 183 TGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRAR----------YGLVHVANNNYDPWNIYA 252 (346)
T ss_dssp EEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEE----------SSEEEEESCEECCCSSCS
T ss_pred ceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEe----------cceEEEEeeEEEcccceE
Confidence 9999999999987666666542 23899999998 43 1222221 136788888887632 44
Q ss_pred eEEeeeccCcceeeeEEeeeeEeeeee
Q 009748 390 VRIKTWQGGSGSVQGVLFSNIQVSEVQ 416 (527)
Q Consensus 390 i~Ikt~~g~~G~V~NI~f~Ni~v~~v~ 416 (527)
+... .-..|.+|+..++...
T Consensus 253 i~~~-------~~~~i~~egN~F~~~~ 272 (346)
T 1pxz_A 253 IGGS-------SNPTILSEGNSFTAPS 272 (346)
T ss_dssp EEEE-------SCCEEEEESCEEECCS
T ss_pred Eecc-------CCceEEEECCEEECCC
Confidence 4321 1245677777776544
No 52
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.08 E-value=2.5e-05 Score=80.82 Aligned_cols=63 Identities=17% Similarity=0.227 Sum_probs=41.5
Q ss_pred eeEEEEEEeeecC--CCCCCCCCceeeecccceEEEeccccc-CCceeEe-ccCCceeEEeeeccCC
Q 009748 293 CIGVVVHDVSVSS--PGDSPNTDGIHLQNSKDVLIHTSNLAC-GDDCVSI-QTGCSNVYVHNVNCGP 355 (527)
Q Consensus 293 c~nV~I~nv~I~s--~~~~~ntDGI~i~~s~nV~I~n~~i~~-gDD~Iai-~sgs~NV~I~n~~~~~ 355 (527)
++||.|+|++|+. +...+..|+|.+..++||+|++|.+.. +|..+.. ..++.+|+|+||.|..
T Consensus 132 a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~ 198 (359)
T 1idk_A 132 AENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDG 198 (359)
T ss_dssp CEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEEC
T ss_pred CCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecC
Confidence 4444444444443 111235688888888899999998875 4555554 4457899999998863
No 53
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.04 E-value=1.7e-05 Score=82.13 Aligned_cols=113 Identities=21% Similarity=0.340 Sum_probs=80.6
Q ss_pred eeEEEEEE----EEecCCcceeee---cceeEEEEEEeeecCCCC-C----------CCCCceeeec-ccceEEEecccc
Q 009748 271 FNVTVTGI----TIQNSPQCHLKF---DNCIGVVVHDVSVSSPGD-S----------PNTDGIHLQN-SKDVLIHTSNLA 331 (527)
Q Consensus 271 ~nv~I~gi----ti~ns~~~~i~~---~~c~nV~I~nv~I~s~~~-~----------~ntDGI~i~~-s~nV~I~n~~i~ 331 (527)
.|.+|.|. +|.+ .+|.+ ..++||.|+|++|+...+ . ...|+|.+.. ++||+|++|++.
T Consensus 87 snkTI~G~G~~~~i~g---~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s 163 (361)
T 1pe9_A 87 ANTTVIGLGTDAKFIN---GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTIS 163 (361)
T ss_dssp SSEEEEECTTCCEEES---SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEE
T ss_pred CCcEEEccCCCeEEec---CEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEee
Confidence 56666663 3332 46777 688999999999985421 0 3479999999 999999999998
Q ss_pred cC------------------CceeEeccCCceeEEeeeccCC-CCcccccccCCCC-ccceeeceeEeeeeeecc
Q 009748 332 CG------------------DDCVSIQTGCSNVYVHNVNCGP-GHGISIGSLGKDN-TKACVSNITVRDVMMHNT 386 (527)
Q Consensus 332 ~g------------------DD~Iai~sgs~NV~I~n~~~~~-g~GI~IGs~g~~~-~~~~v~nI~v~Ni~i~~~ 386 (527)
.+ |..+.++.++.+|+|.+|.|.. ..++-||+.-... ....-.+|+|.++.+.++
T Consensus 164 ~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 164 DGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp CTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred cccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCc
Confidence 53 6678888889999999999976 3356676531100 001234799999988765
No 54
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.02 E-value=0.00053 Score=68.04 Aligned_cols=184 Identities=19% Similarity=0.239 Sum_probs=116.6
Q ss_pred CCcceeeecccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEEeeeccccccccceEEEEec--ceEEccCCCc
Q 009748 106 HSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLD--GTIIAPTGSK 183 (527)
Q Consensus 106 ~~~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~l~l~g~~~~sni~l~~~--Gtl~~~~~~~ 183 (527)
.++++.+++|||.+|-.+||+++|.+.+.. -..|+||.| .|-..-+.+ +...|+.. |+|..-+...
T Consensus 61 darvls~k~fga~~~~~~d~~~~~~~sl~s-----~~~v~i~~g-vf~ss~i~~------~~c~l~g~g~g~~~~~~~~g 128 (542)
T 2x3h_A 61 DARVLTSKPFGAAGDATTDDTEVIAASLNS-----QKAVTISDG-VFSSSGINS------NYCNLDGRGSGVLSHRSSTG 128 (542)
T ss_dssp HHHBCBSSCTTCCCBSSSCCHHHHHHHHTS-----SSCEECCSE-EEEECCEEE------SCCEEECTTTEEEEECSSSS
T ss_pred hheeeecccccccCCcccCcHHHHHhhhcc-----cccEecccc-ccccccccc------ccccccccCCceeeeecCCC
Confidence 567889999999999999999999999874 357999999 887766665 23466655 5776543332
Q ss_pred ccccceeeeEEeeeeeceEEeeceEeeCCceeeeecCCCCCCCCCCccEeEecCCCCCCCCCCCcccccccCCCCCCCcc
Q 009748 184 DWGKGLLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPT 263 (527)
Q Consensus 184 ~~~~~~~~~i~~~~~~nI~I~G~G~IdG~G~~ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rP~ 263 (527)
.|. ....-....+.+++|.|. . ..+....+
T Consensus 129 n~l--vfn~p~~g~ls~~ti~~n------k------------------------------------------~~ds~qg~ 158 (542)
T 2x3h_A 129 NYL--VFNNPRTGRLSNITVESN------K------------------------------------------ATDTTQGQ 158 (542)
T ss_dssp CCE--EEESCEEEEEEEEEEECC------C------------------------------------------SSTTCBCC
T ss_pred CEE--EEeCCCCcceeeEEEecc------c------------------------------------------CCccccce
Confidence 221 000011234677777762 0 00112334
Q ss_pred eEEEeeeeeEEEEEEEEecCCcceeeec------ceeEEEEEEeeecCCCCCCCCC-ceee-ecccceEEEecccccC--
Q 009748 264 ALRFYGSFNVTVTGITIQNSPQCHLKFD------NCIGVVVHDVSVSSPGDSPNTD-GIHL-QNSKDVLIHTSNLACG-- 333 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns~~~~i~~~------~c~nV~I~nv~I~s~~~~~ntD-GI~i-~~s~nV~I~n~~i~~g-- 333 (527)
.+.|.+-.+|+|++|.+.|...-++.+. --++..|++++=.-.++..|.. |..+ .+++|-+|++...++.
T Consensus 159 qvs~~gg~dvsv~~i~fsn~~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypq 238 (542)
T 2x3h_A 159 QVSLAGGSDVTVSDVNFSNVKGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQ 238 (542)
T ss_dssp SEEEESCEEEEEEEEEEEEECSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCT
T ss_pred EEEecCCCcceEeeeeeeecCCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCc
Confidence 6788899999999999998665443332 1244677777655444433322 4443 5789999999988874
Q ss_pred CceeEeccCCceeEEeee
Q 009748 334 DDCVSIQTGCSNVYVHNV 351 (527)
Q Consensus 334 DD~Iai~sgs~NV~I~n~ 351 (527)
-.++-+|...+.-.|.|+
T Consensus 239 fgavelk~~a~ynivsnv 256 (542)
T 2x3h_A 239 FGAVELKGTASYNIVSNV 256 (542)
T ss_dssp TEEEEEETTCBSCEEEEE
T ss_pred cceEEeecceeeehhhhh
Confidence 346777765433333443
No 55
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.01 E-value=3.8e-05 Score=79.33 Aligned_cols=140 Identities=13% Similarity=0.117 Sum_probs=92.6
Q ss_pred eEEEeeeeeEEEEEEEEecCC-----cceeeecceeEEEEEEeeecCCCCC--------CCCCce-eee-cccceEEEec
Q 009748 264 ALRFYGSFNVTVTGITIQNSP-----QCHLKFDNCIGVVVHDVSVSSPGDS--------PNTDGI-HLQ-NSKDVLIHTS 328 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns~-----~~~i~~~~c~nV~I~nv~I~s~~~~--------~ntDGI-~i~-~s~nV~I~n~ 328 (527)
.|.+.+++||.|++|+|+..+ .+.|.+..++||.|++|.+....+. ...||. ++. .+++|+|++|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 467778999999999998654 3569999999999999999853210 113554 553 6899999999
Q ss_pred ccccCCceeEeccC----CceeEEeeeccCC--CCcccccccCCCCccceeeceeEeeeeeecce-eeeEEeeeccCcce
Q 009748 329 NLACGDDCVSIQTG----CSNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNITVRDVMMHNTM-NGVRIKTWQGGSGS 401 (527)
Q Consensus 329 ~i~~gDD~Iai~sg----s~NV~I~n~~~~~--g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~-~Gi~Ikt~~g~~G~ 401 (527)
.|...+-+.-+++. ..+|++.++.+.. ++.-++. ...+++.|+.+.+.. +++... .+
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r----------~G~~Hv~NN~~~n~~~~~~~~~--~~---- 247 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQR----------GGLVHAYNNLYTNITGSGLNVR--QN---- 247 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEE----------SSEEEEESCEEEEESSCSEEEE--TT----
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCc----------CceEEEEccEEECCCCceeccC--CC----
Confidence 99865444434331 1479999998854 1221221 124777888777643 454321 11
Q ss_pred eeeEEeeeeEeeeeeecEE
Q 009748 402 VQGVLFSNIQVSEVQLPIV 420 (527)
Q Consensus 402 V~NI~f~Ni~v~~v~~pi~ 420 (527)
..|.+|+..++....|+.
T Consensus 248 -~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 248 -GQALIENNWFEKAINPVT 265 (353)
T ss_dssp -CEEEEESCEEEEEESSEE
T ss_pred -cEEEEEceEEECCCCceE
Confidence 356777777777777764
No 56
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=97.98 E-value=5.2e-05 Score=77.28 Aligned_cols=105 Identities=11% Similarity=0.136 Sum_probs=66.7
Q ss_pred eeeeEEEEEEEEecCCc------ceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCceeEeccC
Q 009748 269 GSFNVTVTGITIQNSPQ------CHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTG 342 (527)
Q Consensus 269 ~~~nv~I~giti~ns~~------~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sg 342 (527)
.+++++++||+|+|+.. -.|.+ .++++.+.||.|.+ +.|++.....+ ..+++|.|...-|-|. +
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r-~~~~~c~I~G~vDFIf-G-- 161 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQDSLYVHSNR-QFFINCFIAGTVDFIF-G-- 161 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STTCEEECSSE-EEEESCEEEESSSCEE-E--
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cceeeeecCcc-EEEEecEEEeeeeEEe-c--
Confidence 58899999999999642 22444 57778888888886 56777776654 4888888887666554 2
Q ss_pred CceeEEeeeccCC-C-----Cc-ccccccCCCCccceeeceeEeeeeeecc
Q 009748 343 CSNVYVHNVNCGP-G-----HG-ISIGSLGKDNTKACVSNITVRDVMMHNT 386 (527)
Q Consensus 343 s~NV~I~n~~~~~-g-----~G-I~IGs~g~~~~~~~v~nI~v~Ni~i~~~ 386 (527)
.....+++|.+.. . .+ |.-- ++. +...-....|.||++...
T Consensus 162 ~~~a~f~~c~i~~~~~~~~~~~~itA~--~r~-~~~~~~G~vf~~c~i~~~ 209 (319)
T 1gq8_A 162 NAAVVLQDCDIHARRPGSGQKNMVTAQ--GRT-DPNQNTGIVIQKSRIGAT 209 (319)
T ss_dssp SCEEEEESCEEEECCCSTTCCEEEEEE--CCC-STTCCCEEEEESCEEEEC
T ss_pred CCcEEEEeeEEEEecCCCCCceEEEeC--CCC-CCCCCceEEEECCEEecC
Confidence 2357788887643 1 11 2211 110 112334677888888654
No 57
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.92 E-value=9.7e-05 Score=76.44 Aligned_cols=135 Identities=13% Similarity=0.097 Sum_probs=88.0
Q ss_pred eEEEe-eeeeEEEEEEEEecC------CcceeeecceeEEEEEEeeecCCCCCCCCCcee---eecccceEEEecccccC
Q 009748 264 ALRFY-GSFNVTVTGITIQNS------PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIH---LQNSKDVLIHTSNLACG 333 (527)
Q Consensus 264 ~i~~~-~~~nv~I~giti~ns------~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~---i~~s~nV~I~n~~i~~g 333 (527)
.|.+. +++||.|++|+|++. ..+.|.+..+++|.|++|++... .|+.. ...+++|+|++|.|...
T Consensus 125 gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~-----~d~~~~~g~~~s~~VTISnn~f~~~ 199 (359)
T 1idk_A 125 GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARI-----GRQHYVLGTSADNRVSLTNNYIDGV 199 (359)
T ss_dssp CEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEE-----SSCSEEECCCTTCEEEEESCEEECB
T ss_pred eEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecC-----CCCcEEecccCcceEEEECcEecCC
Confidence 57787 899999999999972 23579999999999999999953 34443 34689999999999743
Q ss_pred Cc-----------eeEeccCCceeEEeeeccCCCCcccccccCCCCcccee---eceeEeeeeeecc-eeeeEEeeeccC
Q 009748 334 DD-----------CVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACV---SNITVRDVMMHNT-MNGVRIKTWQGG 398 (527)
Q Consensus 334 DD-----------~Iai~sgs~NV~I~n~~~~~g~GI~IGs~g~~~~~~~v---~nI~v~Ni~i~~~-~~Gi~Ikt~~g~ 398 (527)
++ ...+...+.+|+++++.+.... + +...+ ..++|.|+.+.+. .+++.+.
T Consensus 200 ~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~-----~-----R~Pr~r~g~~~hv~NN~~~n~~~~~i~~~----- 264 (359)
T 1idk_A 200 SDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTS-----G-----RSPKVQDNTLLHAVNNYWYDISGHAFEIG----- 264 (359)
T ss_dssp CSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBC-----S-----CTTEECTTCEEEEESCEEEEEEEEEEEEC-----
T ss_pred cccccccCccccceEEEEecCCCeEEEceEeecCc-----c-----cCccccCCceEEEECCEEecccceEEecc-----
Confidence 31 2333333568888888775411 0 01112 2477777777653 2444321
Q ss_pred cceeeeEEeeeeEeeeeeecEE
Q 009748 399 SGSVQGVLFSNIQVSEVQLPIV 420 (527)
Q Consensus 399 ~G~V~NI~f~Ni~v~~v~~pi~ 420 (527)
.-..|.+|+..++....|+.
T Consensus 265 --~~~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 265 --EGGYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp --TTCEEEEESCEEEEEEEEEE
T ss_pred --CCcEEEEEccEEECCCCcee
Confidence 12456677777766666654
No 58
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.92 E-value=4.3e-05 Score=79.13 Aligned_cols=46 Identities=15% Similarity=0.008 Sum_probs=35.9
Q ss_pred CCCCceeeecccceEEEecccccC-CceeE-eccCCceeEEeeeccCC
Q 009748 310 PNTDGIHLQNSKDVLIHTSNLACG-DDCVS-IQTGCSNVYVHNVNCGP 355 (527)
Q Consensus 310 ~ntDGI~i~~s~nV~I~n~~i~~g-DD~Ia-i~sgs~NV~I~n~~~~~ 355 (527)
+..|+|.+..++||+|++|.+... |..+. ...++.+|+|+||.|..
T Consensus 151 ~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~ 198 (359)
T 1qcx_A 151 WGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDG 198 (359)
T ss_dssp TSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEEC
T ss_pred ccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecC
Confidence 356899999999999999999864 44442 34468899999999864
No 59
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.91 E-value=0.00016 Score=73.83 Aligned_cols=135 Identities=12% Similarity=0.174 Sum_probs=88.3
Q ss_pred eEEEeeeeeEEEEEEEEecCC---cceeeecc-eeEEEEEEeeecCCC----CCCCCCce-eee-cccceEEEecccccC
Q 009748 264 ALRFYGSFNVTVTGITIQNSP---QCHLKFDN-CIGVVVHDVSVSSPG----DSPNTDGI-HLQ-NSKDVLIHTSNLACG 333 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns~---~~~i~~~~-c~nV~I~nv~I~s~~----~~~ntDGI-~i~-~s~nV~I~n~~i~~g 333 (527)
.|++.+++||.|++|+|++.. .+.|.+.. +++|.|++|++.... +....||. ++. .+++|+|++|.|...
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h 175 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENH 175 (326)
T ss_dssp CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEE
T ss_pred EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecC
Confidence 356778999999999999764 45699986 999999999997421 11234554 554 589999999999875
Q ss_pred CceeEeccC------CceeEEeeeccCC--CCcccccccCCCCccceeeceeEeeeeeecc-eeeeEEeeeccCcceeee
Q 009748 334 DDCVSIQTG------CSNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNITVRDVMMHNT-MNGVRIKTWQGGSGSVQG 404 (527)
Q Consensus 334 DD~Iai~sg------s~NV~I~n~~~~~--g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~-~~Gi~Ikt~~g~~G~V~N 404 (527)
+-+.-++.. -.+|++.++.+.. ++.=++. ...+++.|+.+.+. .+++... .+ ..
T Consensus 176 ~k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r----------~G~~Hv~NN~~~n~~~~~~~~~--~~-----a~ 238 (326)
T 3vmv_A 176 WKTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIR----------YADVHMFNNYFKDINDTAINSR--VG-----AR 238 (326)
T ss_dssp EECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEE----------SCEEEEESCEEEEESSCSEEEE--TT-----CE
T ss_pred ceEEEECCCCCCcccCccEEEEeeEecCCcCcCCccc----------CCcEEEEccEEECCCceEEeec--CC-----cE
Confidence 555555542 1379999998854 1211111 12477888888765 3555432 22 34
Q ss_pred EEeeeeEeeee
Q 009748 405 VLFSNIQVSEV 415 (527)
Q Consensus 405 I~f~Ni~v~~v 415 (527)
|.+|+..++..
T Consensus 239 v~~e~N~F~~~ 249 (326)
T 3vmv_A 239 VFVENNYFDNV 249 (326)
T ss_dssp EEEESCEEEEE
T ss_pred EEEEceEEECC
Confidence 45555555544
No 60
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=97.87 E-value=5.3e-05 Score=77.17 Aligned_cols=76 Identities=13% Similarity=0.136 Sum_probs=51.3
Q ss_pred eeeeEEEEEEEEecCCc------ceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCceeEeccC
Q 009748 269 GSFNVTVTGITIQNSPQ------CHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTG 342 (527)
Q Consensus 269 ~~~nv~I~giti~ns~~------~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sg 342 (527)
.+++++++||+|+|+.. -.|.+ .++++.+.||.|.+ +.|++.....+ -.+++|.|...-|-|. +.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r-~~~~~c~I~G~vDFIf-G~- 158 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQDTLYAHSQR-QFYRDSYVTGTVDFIF-GN- 158 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----STTCEEECSSE-EEEESCEEEESSSCEE-EC-
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cccceeecCcc-EEEEeeEEEeceeEEc-CC-
Confidence 68899999999999742 12443 56777788888876 45666666554 3778888876656553 22
Q ss_pred CceeEEeeeccC
Q 009748 343 CSNVYVHNVNCG 354 (527)
Q Consensus 343 s~NV~I~n~~~~ 354 (527)
....+++|.+.
T Consensus 159 -~~avf~~c~i~ 169 (317)
T 1xg2_A 159 -AAVVFQKCQLV 169 (317)
T ss_dssp -CEEEEESCEEE
T ss_pred -ceEEEeeeEEE
Confidence 35777777764
No 61
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.86 E-value=0.00015 Score=75.11 Aligned_cols=135 Identities=16% Similarity=0.088 Sum_probs=83.5
Q ss_pred eEEEe-eeeeEEEEEEEEecCC------cceeeecceeEEEEEEeeecCCCCCCCCCcee---eecccceEEEecccccC
Q 009748 264 ALRFY-GSFNVTVTGITIQNSP------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIH---LQNSKDVLIHTSNLACG 333 (527)
Q Consensus 264 ~i~~~-~~~nv~I~giti~ns~------~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~---i~~s~nV~I~n~~i~~g 333 (527)
.|.+. +++||.|++|+|++.. ..+|.+..+++|.|++|++... .|+.. ...+++|+|++|.|...
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~-----~d~~~~~~~~~s~~vTISnn~f~~~ 199 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI-----GRQHIVLGTSADNRVTISYSLIDGR 199 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE-----SSCSEEECSSCCEEEEEESCEEECB
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc-----CcCceeecccccccEEEECcEecCC
Confidence 57777 8999999999999743 2568888999999999999853 34432 33688999999999743
Q ss_pred Cc-----------eeEeccCCceeEEeeeccCCC--CcccccccCCCCccceeeceeEeeeeeecc-eeeeEEeeeccCc
Q 009748 334 DD-----------CVSIQTGCSNVYVHNVNCGPG--HGISIGSLGKDNTKACVSNITVRDVMMHNT-MNGVRIKTWQGGS 399 (527)
Q Consensus 334 DD-----------~Iai~sgs~NV~I~n~~~~~g--~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~-~~Gi~Ikt~~g~~ 399 (527)
.+ ...+...+.+|+++++.+... +.=++. .-..++|.|+.+.+. .+++...
T Consensus 200 ~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r---------~~~~~hv~NN~~~n~~~~a~~~~------ 264 (359)
T 1qcx_A 200 SDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ---------GNTLLHAVNNLFHNFDGHAFEIG------ 264 (359)
T ss_dssp CSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC---------SSEEEEEESCEEEEEEEEEEEEC------
T ss_pred ccccccCcccccceeEEecCCCCeehcccEeccCcccCceec---------CCceEEEEccEEECccCeEEecC------
Confidence 21 223322245777777766431 111110 012466666666653 2333221
Q ss_pred ceeeeEEeeeeEeeeeeecE
Q 009748 400 GSVQGVLFSNIQVSEVQLPI 419 (527)
Q Consensus 400 G~V~NI~f~Ni~v~~v~~pi 419 (527)
.-..|.+|+..++....|+
T Consensus 265 -~~~~i~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 265 -TGGYVLAEGNVFQDVNVVV 283 (359)
T ss_dssp -TTEEEEEESCEEEEEEEEE
T ss_pred -CCceEEEEeeEEECCCccc
Confidence 2245666666666666554
No 62
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.85 E-value=9.2e-05 Score=75.84 Aligned_cols=140 Identities=11% Similarity=0.127 Sum_probs=93.3
Q ss_pred eEEEe-eeeeEEEEEEEEecCC----cceeeec-----ceeEEEEEEeeecCCCC------CCCCCc-eeee-cccceEE
Q 009748 264 ALRFY-GSFNVTVTGITIQNSP----QCHLKFD-----NCIGVVVHDVSVSSPGD------SPNTDG-IHLQ-NSKDVLI 325 (527)
Q Consensus 264 ~i~~~-~~~nv~I~giti~ns~----~~~i~~~-----~c~nV~I~nv~I~s~~~------~~ntDG-I~i~-~s~nV~I 325 (527)
.|.+. +++||.|++|+|++.. .+.|.+. .++||.|++|++....+ ...-|| +++. .+++|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 46777 8999999999999764 4678888 69999999999964210 111254 4654 5899999
Q ss_pred EecccccCCceeEeccC-------CceeEEeeeccCC--CCcccccccCCCCccceeeceeEeeeeeecc-eeeeEEeee
Q 009748 326 HTSNLACGDDCVSIQTG-------CSNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNITVRDVMMHNT-MNGVRIKTW 395 (527)
Q Consensus 326 ~n~~i~~gDD~Iai~sg-------s~NV~I~n~~~~~--g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~-~~Gi~Ikt~ 395 (527)
++|.|...+-+.-++.. ..+|++.++.+.. .+.=++. ...++|.|+.+.+. .+++...
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r----------~G~~hv~NN~~~n~~~~~i~~~-- 234 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQR----------FGLSHIYNNYFNNVTTSGINVR-- 234 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEE----------SSEEEEESCEEEEECSCSEEEE--
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCcee----------cceEEEEeeEEEcccceEeccC--
Confidence 99999876555555442 1589999998854 1211221 11477888887764 3454321
Q ss_pred ccCcceeeeEEeeeeEeeeeeecEE
Q 009748 396 QGGSGSVQGVLFSNIQVSEVQLPIV 420 (527)
Q Consensus 396 ~g~~G~V~NI~f~Ni~v~~v~~pi~ 420 (527)
.+ ..|.+|+..++....|+.
T Consensus 235 ~~-----~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 235 MG-----GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp TT-----CEEEEESCEEEEEESSEE
T ss_pred CC-----cEEEEEccEEECCCCcee
Confidence 12 356777777777777754
No 63
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.62 E-value=0.00024 Score=73.56 Aligned_cols=110 Identities=19% Similarity=0.202 Sum_probs=75.8
Q ss_pred eEEE---eeeeeEEEEEEEEecCC---------------cceeeecc-eeEEEEEEeeecCCCCC------------CCC
Q 009748 264 ALRF---YGSFNVTVTGITIQNSP---------------QCHLKFDN-CIGVVVHDVSVSSPGDS------------PNT 312 (527)
Q Consensus 264 ~i~~---~~~~nv~I~giti~ns~---------------~~~i~~~~-c~nV~I~nv~I~s~~~~------------~nt 312 (527)
.|.+ .+++||.|++|+|++.. .+.|.+.. ++||.|++|++....+. .-.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 4666 57899999999998631 34689999 99999999999953110 114
Q ss_pred Cc-eeee-cccceEEEecccccCCceeEeccC---------CceeEEeeeccCC--CCc--ccccccCCCCccceeecee
Q 009748 313 DG-IHLQ-NSKDVLIHTSNLACGDDCVSIQTG---------CSNVYVHNVNCGP--GHG--ISIGSLGKDNTKACVSNIT 377 (527)
Q Consensus 313 DG-I~i~-~s~nV~I~n~~i~~gDD~Iai~sg---------s~NV~I~n~~~~~--g~G--I~IGs~g~~~~~~~v~nI~ 377 (527)
|| |++. .+++|+|++|.|...+-+.-+++. .-+|++.++.+.. .+. ++. ..++
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~R~------------G~~H 251 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRVRY------------GSIH 251 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEESS------------CEEE
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCccccc------------ceEE
Confidence 65 4564 689999999999875545444432 1269999998854 121 222 1377
Q ss_pred Eeeeeeec
Q 009748 378 VRDVMMHN 385 (527)
Q Consensus 378 v~Ni~i~~ 385 (527)
+.|+.+.+
T Consensus 252 v~NN~~~~ 259 (361)
T 1pe9_A 252 SFNNVFKG 259 (361)
T ss_dssp EESCEEEE
T ss_pred EEcceEec
Confidence 88888864
No 64
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.62 E-value=0.00015 Score=76.28 Aligned_cols=113 Identities=10% Similarity=0.116 Sum_probs=78.3
Q ss_pred eEEEeeeeeEEEEEEEEecC-------------------CcceeeecceeEEEEEEeeecCCCCC------------CCC
Q 009748 264 ALRFYGSFNVTVTGITIQNS-------------------PQCHLKFDNCIGVVVHDVSVSSPGDS------------PNT 312 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns-------------------~~~~i~~~~c~nV~I~nv~I~s~~~~------------~nt 312 (527)
.|++.+++||.|++|+|++. ....|.+..++||.|++|++....+. .-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 46777899999999999753 23568999999999999999853210 114
Q ss_pred Cc-eeee-cccceEEEecccccCCceeEeccCC--------ceeEEeeeccCC--CCcccccccCCCCccceeeceeEee
Q 009748 313 DG-IHLQ-NSKDVLIHTSNLACGDDCVSIQTGC--------SNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNITVRD 380 (527)
Q Consensus 313 DG-I~i~-~s~nV~I~n~~i~~gDD~Iai~sgs--------~NV~I~n~~~~~--g~GI~IGs~g~~~~~~~v~nI~v~N 380 (527)
|| +++. .+++|+|++|.|...+-+.-+++.- -+|++.+|.+.. .+.=++. .-.+++.|
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~R----------~G~~Hv~N 298 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRVR----------FGQVHIYN 298 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEES----------SCEEEEES
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCcccc----------cceEEEEc
Confidence 65 4455 6899999999998766555554421 259999998854 2222221 01378888
Q ss_pred eeeecc
Q 009748 381 VMMHNT 386 (527)
Q Consensus 381 i~i~~~ 386 (527)
+.+.+.
T Consensus 299 N~~~n~ 304 (416)
T 1vbl_A 299 NYYEFS 304 (416)
T ss_dssp CEEEEC
T ss_pred ceEECC
Confidence 888753
No 65
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.40 E-value=0.00032 Score=73.62 Aligned_cols=108 Identities=6% Similarity=0.011 Sum_probs=80.3
Q ss_pred EEEeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeecc-cceEEEecccccC---------C
Q 009748 265 LRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNS-KDVLIHTSNLACG---------D 334 (527)
Q Consensus 265 i~~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s-~nV~I~n~~i~~g---------D 334 (527)
|.+ ..++++|+||+|+|....+|.+.. .+.+|++|+|... ...||.+... .+.+|++|++... .
T Consensus 110 i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~ 183 (400)
T 1ru4_A 110 FYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMA 183 (400)
T ss_dssp EEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSSC
T ss_pred EEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCccc
Confidence 444 678999999999998777888887 6889999999972 2349999864 4899999998653 2
Q ss_pred ceeEeccC-CceeEEeeeccCC--CCcccccccCCCCccceeeceeEeeeeeecc
Q 009748 335 DCVSIQTG-CSNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNITVRDVMMHNT 386 (527)
Q Consensus 335 D~Iai~sg-s~NV~I~n~~~~~--g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~ 386 (527)
|++.++.. .++.+|++|+++. ..||.+.. ....|+|+||...+.
T Consensus 184 dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~--------~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 184 DGFGPKQKQGPGNRFVGCRAWENSDDGFDLFD--------SPQKVVIENSWAFRN 230 (400)
T ss_dssp CSEEECTTCCSCCEEESCEEESCSSCSEECTT--------CCSCCEEESCEEEST
T ss_pred ceEEEEecccCCeEEECCEEeecCCCcEEEEe--------cCCCEEEEeEEEECC
Confidence 67877642 3788899999875 45776631 234578888877643
No 66
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.39 E-value=0.0011 Score=68.04 Aligned_cols=78 Identities=10% Similarity=0.118 Sum_probs=52.1
Q ss_pred eeeeeEEEEEEEEecCCc------------------ceeee---cceeEEEEEEeeecCCCCCCCCCceeeecccceEEE
Q 009748 268 YGSFNVTVTGITIQNSPQ------------------CHLKF---DNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIH 326 (527)
Q Consensus 268 ~~~~nv~I~giti~ns~~------------------~~i~~---~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~ 326 (527)
..+++++++||+|+|+.. ..+-+ ..++++.+.+|.|.+ ..|.+..... +..++
T Consensus 93 v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G-----~QDTLy~~~g-r~~~~ 166 (342)
T 2nsp_A 93 ISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG-----YQATLYVSGG-RSFFS 166 (342)
T ss_dssp ECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC-----STTCEEECSS-EEEEE
T ss_pred EECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec-----ccceEEECCC-CEEEE
Confidence 358899999999999751 11222 457778888888886 4566666643 57778
Q ss_pred ecccccCCceeEeccCCceeEEeeeccC
Q 009748 327 TSNLACGDDCVSIQTGCSNVYVHNVNCG 354 (527)
Q Consensus 327 n~~i~~gDD~Iai~sgs~NV~I~n~~~~ 354 (527)
+|.|...-|-|. +. -...+++|.+.
T Consensus 167 ~c~I~G~vDFIF-G~--a~a~f~~c~i~ 191 (342)
T 2nsp_A 167 DCRISGTVDFIF-GD--GTALFNNCDLV 191 (342)
T ss_dssp SCEEEESEEEEE-ES--SEEEEESCEEE
T ss_pred cCEEEeceEEEe-CC--ceEEEecCEEE
Confidence 888876555443 22 35777777764
No 67
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.36 E-value=0.00043 Score=72.52 Aligned_cols=112 Identities=8% Similarity=0.123 Sum_probs=76.9
Q ss_pred eEEEeeeeeEEEEEEEEecC-------------------CcceeeecceeEEEEEEeeecCCCCC------------CCC
Q 009748 264 ALRFYGSFNVTVTGITIQNS-------------------PQCHLKFDNCIGVVVHDVSVSSPGDS------------PNT 312 (527)
Q Consensus 264 ~i~~~~~~nv~I~giti~ns-------------------~~~~i~~~~c~nV~I~nv~I~s~~~~------------~nt 312 (527)
.|.+.. +||.|++|+|++. ..+.|.+..++||.|++|++....+. .-.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 466667 9999999999753 23568999999999999999853210 014
Q ss_pred Cce-eee-cccceEEEecccccCCceeEeccC--------CceeEEeeeccCC--CCcccccccCCCCccceeeceeEee
Q 009748 313 DGI-HLQ-NSKDVLIHTSNLACGDDCVSIQTG--------CSNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNITVRD 380 (527)
Q Consensus 313 DGI-~i~-~s~nV~I~n~~i~~gDD~Iai~sg--------s~NV~I~n~~~~~--g~GI~IGs~g~~~~~~~v~nI~v~N 380 (527)
||. ++. .+++|+|++|.|...+-+.-+++. --+|++.+|.+.. .+.=++. .-.++|.|
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R----------~G~~Hv~N 292 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR----------FGQVHVYN 292 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES----------SCEEEEES
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc----------cceEEEEc
Confidence 654 555 689999999999876555555442 1279999998854 2222221 01378888
Q ss_pred eeeecc
Q 009748 381 VMMHNT 386 (527)
Q Consensus 381 i~i~~~ 386 (527)
+.+.+.
T Consensus 293 N~~~n~ 298 (399)
T 2o04_A 293 NYYEGS 298 (399)
T ss_dssp CEEECC
T ss_pred ceEECC
Confidence 888654
No 68
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=97.31 E-value=0.0015 Score=67.52 Aligned_cols=79 Identities=15% Similarity=0.104 Sum_probs=57.8
Q ss_pred eeeeeEEEEEEEEecCCc------------------c--eeeec-ceeEEEEEEeeecCCCCCCCCCceeeecccceEEE
Q 009748 268 YGSFNVTVTGITIQNSPQ------------------C--HLKFD-NCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIH 326 (527)
Q Consensus 268 ~~~~nv~I~giti~ns~~------------------~--~i~~~-~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~ 326 (527)
..+++++++||+|+|+.. . .+.+. ..+.+.+.||.|.+ +.|.+......+..++
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~yf~ 193 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEG-----YQDTLYSKTGSRSYFS 193 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEEC-----SBSCEEECTTCEEEEE
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEe-----cccceEeCCCCCEEEE
Confidence 467899999999999842 1 24444 58889999999997 5677777645678889
Q ss_pred ecccccCCceeEeccCCceeEEeeeccC
Q 009748 327 TSNLACGDDCVSIQTGCSNVYVHNVNCG 354 (527)
Q Consensus 327 n~~i~~gDD~Iai~sgs~NV~I~n~~~~ 354 (527)
+|.|...-|=|. + .-...++||.+.
T Consensus 194 ~c~I~GtvDFIF-G--~a~a~f~~c~i~ 218 (364)
T 3uw0_A 194 DCEISGHVDFIF-G--SGITVFDNCNIV 218 (364)
T ss_dssp SCEEEESEEEEE-E--SSEEEEESCEEE
T ss_pred cCEEEcCCCEEC-C--cceEEEEeeEEE
Confidence 999987666553 2 246778888774
No 69
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.26 E-value=0.00031 Score=73.09 Aligned_cols=110 Identities=6% Similarity=0.104 Sum_probs=84.1
Q ss_pred eeEEEEEEEEecC-----C------cceeeecc-eeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCceeE
Q 009748 271 FNVTVTGITIQNS-----P------QCHLKFDN-CIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVS 338 (527)
Q Consensus 271 ~nv~I~giti~ns-----~------~~~i~~~~-c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD~Ia 338 (527)
++|+|+|++|++. . .-+|.+.. .++++|+++.|.. +.-||.+..+++.+|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 4555555555544 4 23477765 8889999999997 5569999999999999999997778999
Q ss_pred eccCCceeEEeeeccCC---CCcccccccCCCCccceeeceeEeeeee-ecceeeeEEee
Q 009748 339 IQTGCSNVYVHNVNCGP---GHGISIGSLGKDNTKACVSNITVRDVMM-HNTMNGVRIKT 394 (527)
Q Consensus 339 i~sgs~NV~I~n~~~~~---g~GI~IGs~g~~~~~~~v~nI~v~Ni~i-~~~~~Gi~Ikt 394 (527)
+...+....|+++.+.. |+||.+. ...+.+|+++++ .+..+|+.+..
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~---------ns~~~~I~~N~i~~~~R~gIh~m~ 261 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAE---------NHEGLLVTGNNLFPRGRSLIEFTG 261 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEE---------SEESCEEESCEECSCSSEEEEEES
T ss_pred eccccccceEecceeeecCCCCEEEEE---------eCCCCEEECCCcccCcceEEEEEc
Confidence 98866888999998866 3346664 257788888866 55888888754
No 70
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.99 E-value=0.0054 Score=64.18 Aligned_cols=69 Identities=20% Similarity=0.278 Sum_probs=52.5
Q ss_pred eEEEeeeeeEEEE-EEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeee------------cccceEEEeccc
Q 009748 264 ALRFYGSFNVTVT-GITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQ------------NSKDVLIHTSNL 330 (527)
Q Consensus 264 ~i~~~~~~nv~I~-giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~------------~s~nV~I~n~~i 330 (527)
.+++..|+++++. +|.+. ++|+||.|.||+|...+ |.|.+. .|++|.
T Consensus 197 TIhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsVGD-----dciaiksGk~~~~~~~~~~se~~~------ 256 (514)
T 2vbk_A 197 HSKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSRGN-----YSADESFGIRIQPQTYAWSSEAVR------ 256 (514)
T ss_dssp EEEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEECTT-----SCCTTCEEEEEECBCCTTTSSCBC------
T ss_pred EEeEeccCceecccCcccc---------CCCCeEEEeccEEecCc-----ceeeeecCceecccccCCcchhcc------
Confidence 4678889999988 77775 37999999999999854 455543 355555
Q ss_pred ccCCceeEeccC-----Cce-eEEeeeccCC
Q 009748 331 ACGDDCVSIQTG-----CSN-VYVHNVNCGP 355 (527)
Q Consensus 331 ~~gDD~Iai~sg-----s~N-V~I~n~~~~~ 355 (527)
+.+|.+++. .+| |+|++|.+..
T Consensus 257 ---hgav~igSE~m~~Gvk~~v~v~~Clf~~ 284 (514)
T 2vbk_A 257 ---SEAIILDSETMCIGFKNAVYVHDCLDLH 284 (514)
T ss_dssp ---CEEEEEESSEEEESCSEEEEESCCEEEE
T ss_pred ---cccEEECchhhcccccccEEEEeeeccC
Confidence 567777764 689 9999998865
No 71
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=96.89 E-value=0.035 Score=58.10 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=32.0
Q ss_pred chHHHHHHHHhcccc---eeeeEEecCceeEEEeeeccccccccceEEEEecc
Q 009748 125 DTKAFEAAWAAACKV---EASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDG 174 (527)
Q Consensus 125 dt~Aiq~Ai~~a~~~---gg~~V~iP~G~~yl~~~l~l~g~~~~sni~l~~~G 174 (527)
+-.-||+||++|... ..-+|+|.+| +|. ..|.++. -+.+|+|+.+|
T Consensus 88 ~f~TIqeAVdaap~~~~~~r~vI~Ik~G-vY~-E~V~Ip~--~K~~ItL~G~G 136 (422)
T 3grh_A 88 THTTIQAAVDAAIIKRTNKRQYIAVMPG-EYQ-GTVYVPA--APGGITLYGTG 136 (422)
T ss_dssp CBSSHHHHHHHHHTTCCSSCEEEEECSE-EEE-SCEEECC--CSSCEEEEECS
T ss_pred CcCCHHHHHHhchhcCCCccEEEEEeCC-eEe-eeEEecC--CCCcEEEEecc
Confidence 456799999987432 2368999999 886 3466642 15788888775
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.19 E-value=0.26 Score=45.85 Aligned_cols=50 Identities=24% Similarity=0.426 Sum_probs=30.0
Q ss_pred EEEEEEeeecCCCCCCCCCceeeecccceEEEecccc-cCCceeEeccCCceeEEeee
Q 009748 295 GVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLA-CGDDCVSIQTGCSNVYVHNV 351 (527)
Q Consensus 295 nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~-~gDD~Iai~sgs~NV~I~n~ 351 (527)
+.+++|+.|-. ...||||..+ +-+|+|+... -+.|++.++. ...++|.+.
T Consensus 53 GaTLkNvIIG~----~~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GG 103 (196)
T 3t9g_A 53 GANLKNVIIGA----PGCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGG 103 (196)
T ss_dssp TCEEEEEEECS----CCTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESC
T ss_pred CCEEEEEEECC----CCcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECC
Confidence 44566666643 2568888763 4567777765 3678888774 334444433
No 73
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=94.93 E-value=0.6 Score=43.45 Aligned_cols=80 Identities=13% Similarity=0.011 Sum_probs=58.4
Q ss_pred eeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCceeEeccCCceeE
Q 009748 268 YGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVY 347 (527)
Q Consensus 268 ~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~ 347 (527)
.--++.+|+|+.|-.....+||.. -+.+|+|+-...- -.|.+.+.++..+.|.+.-.++.+|-|.-..+.-.+.
T Consensus 49 ~le~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~ 122 (196)
T 3t9g_A 49 KLEKGANLKNVIIGAPGCDGIHCY--GDNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFK 122 (196)
T ss_dssp EECTTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEE
T ss_pred EEcCCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECCCceEE
Confidence 334678999999977777788876 3578888887753 5688888877788888888888877765555555566
Q ss_pred Eeeecc
Q 009748 348 VHNVNC 353 (527)
Q Consensus 348 I~n~~~ 353 (527)
|+|...
T Consensus 123 I~nF~~ 128 (196)
T 3t9g_A 123 VKNFTA 128 (196)
T ss_dssp EEEEEE
T ss_pred EeeEEE
Confidence 655554
No 74
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=93.89 E-value=0.11 Score=56.08 Aligned_cols=139 Identities=5% Similarity=-0.021 Sum_probs=90.7
Q ss_pred eeeeEEEEEEEEecC-CcceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCC-----ceeEeccC
Q 009748 269 GSFNVTVTGITIQNS-PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGD-----DCVSIQTG 342 (527)
Q Consensus 269 ~~~nv~I~giti~ns-~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gD-----D~Iai~sg 342 (527)
...+.+|++-.+.+. ....+....+.+.+|++.++.. +..||.+..+++.+|+++.|.... .||.+..
T Consensus 226 ~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~-----~~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~- 299 (506)
T 1dbg_A 226 DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLN-----CQGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG- 299 (506)
T ss_dssp CBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEES-----CSSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-
T ss_pred ccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEc-----ccCcEEEeecCccEEECCEEECCcCccCceEEEEEC-
Confidence 457788887777653 2344555555567888888885 344799988888899999887643 5777754
Q ss_pred CceeEEeeeccCCCC--------cccccccCCCC-ccceeeceeEeeeeeeccee-eeEEeeec-----------cCcce
Q 009748 343 CSNVYVHNVNCGPGH--------GISIGSLGKDN-TKACVSNITVRDVMMHNTMN-GVRIKTWQ-----------GGSGS 401 (527)
Q Consensus 343 s~NV~I~n~~~~~g~--------GI~IGs~g~~~-~~~~v~nI~v~Ni~i~~~~~-Gi~Ikt~~-----------g~~G~ 401 (527)
++.+|+|+.|.... ||.|.. |..+ .-..+++++|++++|.+... ||.|..+. .....
T Consensus 300 -~~~~I~nN~f~~~~g~~~~~~~GI~i~~-G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~ 377 (506)
T 1dbg_A 300 -SRHVIACNYFELSETIKSRGNAALYLNP-GAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFET 377 (506)
T ss_dssp -BSCEEESCEEEESSBCGGGTSEEEEECC-BCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBC
T ss_pred -CCCEEECCEEECCcCccccccccEEEec-CCCccccccccCcEEECCEEECCccccEEEcccccccccccccccccccC
Confidence 34488888876532 444421 1100 12346899999999999986 99988110 01134
Q ss_pred eeeEEeeeeEeeee
Q 009748 402 VQGVLFSNIQVSEV 415 (527)
Q Consensus 402 V~NI~f~Ni~v~~v 415 (527)
=.|++|.|.-+.+.
T Consensus 378 p~~~~~~nN~i~~~ 391 (506)
T 1dbg_A 378 PHQLMLKGNLFFKD 391 (506)
T ss_dssp CCSEEEESCEEECC
T ss_pred CCcEEEEccEEEcC
Confidence 46788888777554
No 75
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=93.54 E-value=0.23 Score=50.31 Aligned_cols=110 Identities=7% Similarity=0.150 Sum_probs=74.0
Q ss_pred ceeEEEEEEeeecCCCCCC--CCCceeeecccceEEEecccccCCceeEeccCCceeEEeeeccCCCCcccccccCCCCc
Q 009748 292 NCIGVVVHDVSVSSPGDSP--NTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNT 369 (527)
Q Consensus 292 ~c~nV~I~nv~I~s~~~~~--ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~I~n~~~~~g~GI~IGs~g~~~~ 369 (527)
..++++++|++|.+..... ..-+|.+ .++++.++||.|....|.+....+ + -++++|.+.+.-.+-+|.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~-r-~~~~~c~I~G~vDFIfG~------ 158 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHSQ-R-QFYRDSYVTGTVDFIFGN------ 158 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECSS-E-EEEESCEEEESSSCEEEC------
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecCc-c-EEEEeeEEEeceeEEcCC------
Confidence 6789999999999754211 2335555 478999999999999999888764 4 489999998655555553
Q ss_pred cceeeceeEeeeeeeccee----eeEEeeeccC--cceeeeEEeeeeEeeee
Q 009748 370 KACVSNITVRDVMMHNTMN----GVRIKTWQGG--SGSVQGVLFSNIQVSEV 415 (527)
Q Consensus 370 ~~~v~nI~v~Ni~i~~~~~----Gi~Ikt~~g~--~G~V~NI~f~Ni~v~~v 415 (527)
....|+||++..... .-.|. -+++ ...-..+.|.|+++...
T Consensus 159 ----~~avf~~c~i~~~~~~~~~~~~it-A~~r~~~~~~~G~vf~~c~i~~~ 205 (317)
T 1xg2_A 159 ----AAVVFQKCQLVARKPGKYQQNMVT-AQGRTDPNQATGTSIQFCNIIAS 205 (317)
T ss_dssp ----CEEEEESCEEEECCCSTTCCEEEE-EECCCCTTSCCEEEEESCEEEEC
T ss_pred ----ceEEEeeeEEEEeccCCCCccEEE-ecCcCCCCCCcEEEEECCEEecC
Confidence 136788888875321 11222 2222 23456788999888754
No 76
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=93.00 E-value=0.88 Score=42.45 Aligned_cols=49 Identities=22% Similarity=0.516 Sum_probs=29.8
Q ss_pred EEEEEEeeecCCCCCCCCCceeeecccceEEEecccc-cCCceeEeccCCceeEEee
Q 009748 295 GVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLA-CGDDCVSIQTGCSNVYVHN 350 (527)
Q Consensus 295 nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~-~gDD~Iai~sgs~NV~I~n 350 (527)
+.+++|+.|-. +..||||..+ +-+|+|+... -+.|++.++. ...++|.+
T Consensus 49 GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~G 98 (197)
T 1ee6_A 49 GASLKNVVIGA----PAADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISG 98 (197)
T ss_dssp TEEEEEEEECS----SCTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEES
T ss_pred CCEEEEEEEcC----CCcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEEC
Confidence 45566666644 2567888764 3677777765 3677887775 23444433
No 77
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=92.00 E-value=0.96 Score=42.19 Aligned_cols=80 Identities=14% Similarity=0.118 Sum_probs=58.7
Q ss_pred EeeeeeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccCCceeEeccCCcee
Q 009748 267 FYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNV 346 (527)
Q Consensus 267 ~~~~~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV 346 (527)
|.--++.+|+|+.|-.....+||... +.+|+|+-...- -.|.+.+.++..++|.+.-.++.+|-|.-..+.-.+
T Consensus 44 F~le~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv 117 (197)
T 1ee6_A 44 FRLEAGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTI 117 (197)
T ss_dssp EEECTTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEE
T ss_pred EEecCCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecCCceE
Confidence 33346789999999877778888864 588999888763 568888887777888888888877776555554556
Q ss_pred EEeeec
Q 009748 347 YVHNVN 352 (527)
Q Consensus 347 ~I~n~~ 352 (527)
.|+|..
T Consensus 118 ~I~nF~ 123 (197)
T 1ee6_A 118 NIRNFR 123 (197)
T ss_dssp EEESCE
T ss_pred EEeeEE
Confidence 665544
No 78
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=91.21 E-value=4.1 Score=41.05 Aligned_cols=129 Identities=13% Similarity=0.122 Sum_probs=67.3
Q ss_pred EEEEEEeeecCCCCCCCCCceeeecccceEEEecccc-cCCceeEeccCCceeEEeeeccCCC-------Cc--cccccc
Q 009748 295 GVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLA-CGDDCVSIQTGCSNVYVHNVNCGPG-------HG--ISIGSL 364 (527)
Q Consensus 295 nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~-~gDD~Iai~sgs~NV~I~n~~~~~g-------~G--I~IGs~ 364 (527)
+.+++|+.|-. ...||||.... +-+|+|+... -+.|++.++. ..+.|.+.-.... .. |..-.
T Consensus 159 GatlkNvIiG~----~~~dGIHC~~G-~CtleNVwwedVcEDA~T~kg--~~~~I~GGgA~~a~~g~~g~~DKV~Q~Ng- 230 (344)
T 3b4n_A 159 ATVKNLRISAS----GGADGIHCDSG-NCTIENVIWEDICEDAATNNG--KTMTIVGGIAHNAKDGYGGKPDKVLQHNS- 230 (344)
T ss_dssp CEEEEEEECTT----CCTTCEEEEES-EEEEEEEEESSCSSCSEEECS--SEEEEESCEEEECTTCTTSSCCEEEEECC-
T ss_pred CcEEEEEEecC----CCccceEEccC-CeeEEEEeehhcccccceecC--ceEEEECchhccccccccCCCCcEEEeCC-
Confidence 34556665543 35788888721 4677777766 3788888884 3555544332211 01 11111
Q ss_pred CCCCccceeeceeEee-eeeecceeeeEEeeec--cCcceeeeEEeeeeEeeeee-ecEEEeeeeecCCccccccceEEe
Q 009748 365 GKDNTKACVSNITVRD-VMMHNTMNGVRIKTWQ--GGSGSVQGVLFSNIQVSEVQ-LPIVIDQFYCDKSTCKNQTSAVAL 440 (527)
Q Consensus 365 g~~~~~~~v~nI~v~N-i~i~~~~~Gi~Ikt~~--g~~G~V~NI~f~Ni~v~~v~-~pi~I~~~y~~~~~~~~~~~~~~i 440 (527)
--.++|.| ..+.-...|-...+.- ...+.-|+|+++|+.+.+.. .-+.|+..|. +...|
T Consensus 231 --------~gtv~I~~~~F~~~~~~GKl~RSCGnC~~~~~~R~v~i~nv~~~g~~~~lvGiN~NyG---------Dtati 293 (344)
T 3b4n_A 231 --------KNSTTVVKGNFTLTGEHGKLWRSCGDCSNNGGPRFLTVTSATVNGTIDSIAGVNRNYG---------DVATI 293 (344)
T ss_dssp --------SSEEEEEETTEEEEEEEEEEEEECSSCTTCCCCEEEEESSEEEEEEEEEEEEEEGGGT---------CEEEE
T ss_pred --------CccEEEecCceEEEccCCeEeEccCCcccCCcceEEEEeceEEeCCceEEEEEeCCCC---------CEEEE
Confidence 12344443 1111112233333321 11235688888888886553 3345665543 45778
Q ss_pred eceeeeEe
Q 009748 441 SGITYERV 448 (527)
Q Consensus 441 ~nItf~NI 448 (527)
+|+++++-
T Consensus 294 ~n~~i~~~ 301 (344)
T 3b4n_A 294 SGLKIKNY 301 (344)
T ss_dssp CSEEETTC
T ss_pred EEEEEecC
Confidence 88888864
No 79
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=90.63 E-value=0.69 Score=47.21 Aligned_cols=111 Identities=7% Similarity=0.117 Sum_probs=73.1
Q ss_pred ceeEEEEEEeeecCCCC--------------CCCCCceee---ecccceEEEecccccCCceeEeccCCceeEEeeeccC
Q 009748 292 NCIGVVVHDVSVSSPGD--------------SPNTDGIHL---QNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCG 354 (527)
Q Consensus 292 ~c~nV~I~nv~I~s~~~--------------~~ntDGI~i---~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~I~n~~~~ 354 (527)
.+++++++|++|.+... ........+ ..++++.++||.|....|.+.... ...+++||.+.
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I~ 171 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRIS 171 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECS--SEEEEESCEEE
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECC--CCEEEEcCEEE
Confidence 36788999999987541 112333444 357899999999999999988876 47899999998
Q ss_pred CCCcccccccCCCCccceeeceeEeeeeeeccee---e-----eEEeeeccC-cceeeeEEeeeeEeeee
Q 009748 355 PGHGISIGSLGKDNTKACVSNITVRDVMMHNTMN---G-----VRIKTWQGG-SGSVQGVLFSNIQVSEV 415 (527)
Q Consensus 355 ~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~---G-----i~Ikt~~g~-~G~V~NI~f~Ni~v~~v 415 (527)
+.-.+-+|. ....|+||++.-... + -.|.. ++. ...-..+.|.|+++.+.
T Consensus 172 G~vDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~~~g~ItA-~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 172 GTVDFIFGD----------GTALFNNCDLVSRYRADVKSGNVSGYLTA-PSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp ESEEEEEES----------SEEEEESCEEEECCCTTSCTTSCCEEEEE-ECCBTTCSCCEEEESCEEEES
T ss_pred eceEEEeCC----------ceEEEecCEEEEecCcccccccCceEEEc-cCCCCCCCCEEEEEcCEEecC
Confidence 655565653 136788888864321 1 12322 221 12334588999998764
No 80
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=90.07 E-value=0.71 Score=46.67 Aligned_cols=110 Identities=10% Similarity=0.221 Sum_probs=73.6
Q ss_pred eeEEEEEEeeecCCCCCC--CCCceeeecccceEEEecccccCCceeEeccCCceeEEeeeccCCCCcccccccCCCCcc
Q 009748 293 CIGVVVHDVSVSSPGDSP--NTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTK 370 (527)
Q Consensus 293 c~nV~I~nv~I~s~~~~~--ntDGI~i~~s~nV~I~n~~i~~gDD~Iai~sgs~NV~I~n~~~~~g~GI~IGs~g~~~~~ 370 (527)
.++++++|++|.+..... ..-+|.+ .++++.++||.|....|.+....+ + .++++|.+.+.-.+-+|.
T Consensus 93 a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~-r-~~~~~c~I~G~vDFIfG~------- 162 (319)
T 1gq8_A 93 GAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHSN-R-QFFINCFIAGTVDFIFGN------- 162 (319)
T ss_dssp STTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECSS-E-EEEESCEEEESSSCEEES-------
T ss_pred CCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecCc-c-EEEEecEEEeeeeEEecC-------
Confidence 568899999998753211 2335555 478999999999999999988774 3 599999998654555553
Q ss_pred ceeeceeEeeeeeeccee----eeEEeeeccC--cceeeeEEeeeeEeeeee
Q 009748 371 ACVSNITVRDVMMHNTMN----GVRIKTWQGG--SGSVQGVLFSNIQVSEVQ 416 (527)
Q Consensus 371 ~~v~nI~v~Ni~i~~~~~----Gi~Ikt~~g~--~G~V~NI~f~Ni~v~~v~ 416 (527)
....|+||++..... .-.|.. +++ ...-..+.|.|+++....
T Consensus 163 ---~~a~f~~c~i~~~~~~~~~~~~itA-~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 163 ---AAVVLQDCDIHARRPGSGQKNMVTA-QGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp ---CEEEEESCEEEECCCSTTCCEEEEE-ECCCSTTCCCEEEEESCEEEECT
T ss_pred ---CcEEEEeeEEEEecCCCCCceEEEe-CCCCCCCCCceEEEECCEEecCC
Confidence 136788888875321 112222 232 234567889999987643
No 81
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=85.73 E-value=2 Score=44.17 Aligned_cols=113 Identities=16% Similarity=0.133 Sum_probs=73.3
Q ss_pred ceeEEEEEEeeecCCCC--------------CCCCC--ceeee-cccceEEEecccccCCceeEeccCCceeEEeeeccC
Q 009748 292 NCIGVVVHDVSVSSPGD--------------SPNTD--GIHLQ-NSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCG 354 (527)
Q Consensus 292 ~c~nV~I~nv~I~s~~~--------------~~ntD--GI~i~-~s~nV~I~n~~i~~gDD~Iai~sgs~NV~I~n~~~~ 354 (527)
..++++++|++|.+... ..... ++.+. .+++..+.||.|....|.+.... ....++++|.+.
T Consensus 120 ~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I~ 198 (364)
T 3uw0_A 120 NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEIS 198 (364)
T ss_dssp CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEEE
T ss_pred ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEEE
Confidence 35678889999887532 01233 44443 47899999999999999998873 358899999998
Q ss_pred CCCcccccccCCCCccceeeceeEeeeeeecce------eeeEEeeeccCcceeeeEEeeeeEeeee
Q 009748 355 PGHGISIGSLGKDNTKACVSNITVRDVMMHNTM------NGVRIKTWQGGSGSVQGVLFSNIQVSEV 415 (527)
Q Consensus 355 ~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~------~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v 415 (527)
+.-.+-+|. ....|+||++.-.. .+-.|.........-..+.|.|+++...
T Consensus 199 GtvDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 199 GHVDFIFGS----------GITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp ESEEEEEES----------SEEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEEC
T ss_pred cCCCEECCc----------ceEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEecC
Confidence 765666663 24668888886431 1122322211112334588999998754
No 82
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=85.13 E-value=27 Score=36.16 Aligned_cols=70 Identities=13% Similarity=0.214 Sum_probs=37.2
Q ss_pred CceeEEeeeccCC--CCcccccccCCCC-------------ccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEe
Q 009748 343 CSNVYVHNVNCGP--GHGISIGSLGKDN-------------TKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLF 407 (527)
Q Consensus 343 s~NV~I~n~~~~~--g~GI~IGs~g~~~-------------~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f 407 (527)
+-|+.+++...-. -+|+.+|+..... -..--.|=.|+|+..+++. |+-+. |+|..++|+||+.
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~l-GVG~~-~DG~~~~v~ni~~ 339 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCM-GIGAW-WDGQKNIIDNVVT 339 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCS-SCSSE-ECSSSCEEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccc-eeeee-ecCCCCeEeeEEe
Confidence 4677777776432 3466666522100 0011144556676666652 22221 3566678888887
Q ss_pred eeeEeee
Q 009748 408 SNIQVSE 414 (527)
Q Consensus 408 ~Ni~v~~ 414 (527)
++..-.+
T Consensus 340 ~dcag~G 346 (543)
T 3riq_A 340 YEAHKEG 346 (543)
T ss_dssp ESCSSCS
T ss_pred eccccCc
Confidence 7666543
No 83
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=84.54 E-value=8.2 Score=38.87 Aligned_cols=132 Identities=13% Similarity=0.037 Sum_probs=65.5
Q ss_pred eeEEEEEEEEecCCcceeeecceeEEEEEEeeecCCCCCCCCCceeeecccceEEEecccccC-------CceeEeccCC
Q 009748 271 FNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACG-------DDCVSIQTGC 343 (527)
Q Consensus 271 ~nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s~~~~~ntDGI~i~~s~nV~I~n~~i~~g-------DD~Iai~sgs 343 (527)
+..+++++.|-.....+||...- +.+|+|+-...- -.|.+.+.+ ..+.|.+.-.++. +|-|.=..+.
T Consensus 158 ~GatlkNvIiG~~~~dGIHC~~G-~CtleNVwwedV----cEDA~T~kg-~~~~I~GGgA~~a~~g~~g~~DKV~Q~Ng~ 231 (344)
T 3b4n_A 158 NATVKNLRISASGGADGIHCDSG-NCTIENVIWEDI----CEDAATNNG-KTMTIVGGIAHNAKDGYGGKPDKVLQHNSK 231 (344)
T ss_dssp SCEEEEEEECTTCCTTCEEEEES-EEEEEEEEESSC----SSCSEEECS-SEEEEESCEEEECTTCTTSSCCEEEEECCS
T ss_pred cCcEEEEEEecCCCccceEEccC-CeeEEEEeehhc----ccccceecC-ceEEEECchhccccccccCCCCcEEEeCCC
Confidence 35677777776555566666411 466777766642 456666663 3566666655554 5555444444
Q ss_pred ceeEEee-eccC-CCCcccccccCCCCccceeeceeEeeeeeecce-eeeEEeeeccCcceeeeEEee
Q 009748 344 SNVYVHN-VNCG-PGHGISIGSLGKDNTKACVSNITVRDVMMHNTM-NGVRIKTWQGGSGSVQGVLFS 408 (527)
Q Consensus 344 ~NV~I~n-~~~~-~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~-~Gi~Ikt~~g~~G~V~NI~f~ 408 (527)
-.+.|.| .++- ...|=-+-|-|.-...+.-++|+|+|+++.+.. .-+.|-...|....|+|+.+.
T Consensus 232 gtv~I~~~~F~~~~~~GKl~RSCGnC~~~~~~R~v~i~nv~~~g~~~~lvGiN~NyGDtati~n~~i~ 299 (344)
T 3b4n_A 232 NSTTVVKGNFTLTGEHGKLWRSCGDCSNNGGPRFLTVTSATVNGTIDSIAGVNRNYGDVATISGLKIK 299 (344)
T ss_dssp SEEEEEETTEEEEEEEEEEEEECSSCTTCCCCEEEEESSEEEEEEEEEEEEEEGGGTCEEEECSEEET
T ss_pred ccEEEecCceEEEccCCeEeEccCCcccCCcceEEEEeceEEeCCceEEEEEeCCCCCEEEEEEEEEe
Confidence 5666654 2211 122211112111111123467777777764332 223344444554555544444
No 84
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=77.33 E-value=0.69 Score=48.02 Aligned_cols=39 Identities=28% Similarity=0.309 Sum_probs=27.2
Q ss_pred ccccCCCCCcchHHHHHHHHhcccceeeeEEecCceeEEEee
Q 009748 115 FGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGP 156 (527)
Q Consensus 115 ~GA~~dg~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl~~~ 156 (527)
=||+|||++|||+|+.+|++++.. +.++=-.|.+|.+..
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~~~---~~~IDG~G~T~kVs~ 42 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDTPV---GQKINGNGKTYKVTS 42 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHSCT---TSCEECTTCEEECSS
T ss_pred CcccCCCccCcHHHHHHHhccCCC---CeEEeCCCceEEeee
Confidence 489999999999999999986542 333333444554443
No 85
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=53.86 E-value=6.5 Score=38.34 Aligned_cols=27 Identities=15% Similarity=0.303 Sum_probs=21.2
Q ss_pred CcchHHHHHHHHhcccceeeeEEecCc
Q 009748 123 SDDTKAFEAAWAAACKVEASIMVVPAE 149 (527)
Q Consensus 123 tDdt~Aiq~Ai~~a~~~gg~~V~iP~G 149 (527)
..+.+.+.++++.|.+.+...|++|+-
T Consensus 36 ~~Nl~~~~~~i~~A~~~gadlvvfPE~ 62 (281)
T 3p8k_A 36 SKNETQITQWFEKNMNAEVDVVVLPEM 62 (281)
T ss_dssp HHHHHHHHHHHHHHCCTTCCEEECCSS
T ss_pred HHHHHHHHHHHHHHHhCCCcEEEcCCC
Confidence 456777888888887777788999984
No 86
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=53.07 E-value=17 Score=36.89 Aligned_cols=57 Identities=30% Similarity=0.393 Sum_probs=34.1
Q ss_pred ceeEEeeeccCCCCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeeeeEeeee
Q 009748 344 SNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEV 415 (527)
Q Consensus 344 ~NV~I~n~~~~~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v 415 (527)
.|=.|+|..+.++-|+.+|-.| .+++|+||+++||- ..|..+-+. +=+|.||.+-+.
T Consensus 317 ~NHliDnllv~gsLGVG~GMDG---~G~YVSNitv~DCA----GsG~~~~t~--------~~~FtNi~vID~ 373 (559)
T 2vfm_A 317 LNHLIDNLLVRGALGVGFGMDG---KGMYVSNITVEDCA----GSGAYLLTH--------ESVFTNIAIIDT 373 (559)
T ss_dssp CCCEEEEEEEECCSSEEEEEEE---ESCEEEEEEEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred chhhhhhheeecccceeeeecC---CCceEeeeEehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 5667777777666666665433 45678888888873 234444333 225666666543
No 87
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=52.29 E-value=15 Score=37.20 Aligned_cols=57 Identities=33% Similarity=0.466 Sum_probs=34.2
Q ss_pred ceeEEeeeccCCCCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeeeeEeeee
Q 009748 344 SNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEV 415 (527)
Q Consensus 344 ~NV~I~n~~~~~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v 415 (527)
.|=.|+|..+.++-|+.+|-.| .+++|+||+++||- ..|..+-+. +=+|.||.+-+.
T Consensus 320 ~NHliDnllv~gsLGVG~GMDG---~G~YVSNitv~DCA----GsG~~~~t~--------~~~FtNi~vID~ 376 (559)
T 2v5i_A 320 NNHLVDNILVMNSLGVGLGMDG---SGGYVSNVTVQDCA----GAGMLAHTY--------NRVFSNITVIDC 376 (559)
T ss_dssp CCCEEEEEEEESCSSEEEEEEE---ESCEEEEEEEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred chhhhhhheeecccceeeeecC---CCceEeeeEehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 5667777777666666665433 45678888888873 234444443 226666666543
No 88
>2es4_D Lipase chaperone; protein-protein complex, steric chaperone, triacylglycerol hydrolase, all alpha helix protein, A/B hydrolase fold; 1.85A {Burkholderia glumae} SCOP: a.137.15.1
Probab=52.23 E-value=8.9 Score=38.81 Aligned_cols=28 Identities=14% Similarity=0.039 Sum_probs=11.2
Q ss_pred CCcceeeecccccCCCCCcchHHHHHHHHh
Q 009748 106 HSSVFNVKDFGAKGNGVSDDTKAFEAAWAA 135 (527)
Q Consensus 106 ~~~~~~V~~~GA~~dg~tDdt~Aiq~Ai~~ 135 (527)
....+|. +-.+.+|.---+.+++..++.
T Consensus 64 ~gTevd~--l~~D~~G~Li~~~~lR~~FDY 91 (332)
T 2es4_D 64 AGSHAPR--LPLAAGGRLARTRAVREFFDY 91 (332)
T ss_dssp TTCCCCC--CCBCTTSSBCCSTHHHHHHHH
T ss_pred cCCCCCC--cccCCCCCccccHHHHHHHHH
Confidence 3344444 333444433333344444443
No 89
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=43.33 E-value=27 Score=36.87 Aligned_cols=57 Identities=30% Similarity=0.393 Sum_probs=35.5
Q ss_pred ceeEEeeeccCCCCcccccccCCCCccceeeceeEeeeeeecceeeeEEeeeccCcceeeeEEeeeeEeeee
Q 009748 344 SNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEV 415 (527)
Q Consensus 344 ~NV~I~n~~~~~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI~f~Ni~v~~v 415 (527)
.|=.|+|..+.++-|+.+|-.| .+++|+||+++||- ..|..+-+. +=+|.||.+-+.
T Consensus 424 ~nhlidn~~v~~slgvg~gmdg---~g~yvsnitv~dca----g~g~~~~~~--------~~~ftni~vid~ 480 (666)
T 2xc1_A 424 LNHLIDNLLVRGALGVGFGMDG---KGMYVSNITVEDCA----GSGAYLLTH--------ESVFTNIAIIDT 480 (666)
T ss_dssp CCCEEEEEEEESCSSEEEEEEE---ESCEEEEEEEESCS----SEEEEEEEE--------SCEEEEEEEESC
T ss_pred chhhhhhheeecccceeeeecC---CCceEeeeEehhcc----CcceEEeec--------cceeeeeEEEec
Confidence 5667777777766666665443 45778888888873 234444443 226666666544
No 90
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=42.37 E-value=11 Score=36.77 Aligned_cols=27 Identities=19% Similarity=0.261 Sum_probs=20.4
Q ss_pred CcchHHHHHHHHhcccceeeeEEecCc
Q 009748 123 SDDTKAFEAAWAAACKVEASIMVVPAE 149 (527)
Q Consensus 123 tDdt~Aiq~Ai~~a~~~gg~~V~iP~G 149 (527)
..+.+.+.++++.|.+.+...|++|+-
T Consensus 36 ~~N~~~~~~~i~~A~~~gadlvvfPE~ 62 (283)
T 3hkx_A 36 QHNLDLIDDAAARASEQGAQLLLTPEL 62 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECCTT
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEcCCC
Confidence 446677778888777667788999995
No 91
>2lie_A CCL2 lectin; sugar binding protein; NMR {Coprinopsis cinerea} PDB: 2liq_A*
Probab=48.34 E-value=5.3 Score=34.77 Aligned_cols=43 Identities=12% Similarity=0.349 Sum_probs=27.2
Q ss_pred CCcceeeecccccCC--C-CCcchHHHHHHHHhcccceeeeEEecCceeEE
Q 009748 106 HSSVFNVKDFGAKGN--G-VSDDTKAFEAAWAAACKVEASIMVVPAESVFL 153 (527)
Q Consensus 106 ~~~~~~V~~~GA~~d--g-~tDdt~Aiq~Ai~~a~~~gg~~V~iP~G~~yl 153 (527)
....+.+.+|-+.+. . ...+..-.|.||.. |...++||++ .|.
T Consensus 59 a~q~Wil~~~D~n~q~~sIsp~~s~~sq~~wg~----gNv~~vlP~~-nyV 104 (153)
T 2lie_A 59 SEQAWILRSYDSNSNTWTISPVGSPNSQIGWGA----GNVPVVLPPN-NYV 104 (153)
Confidence 445677888877654 1 23345567777764 3356789998 564
No 92
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=39.94 E-value=48 Score=34.34 Aligned_cols=44 Identities=16% Similarity=0.166 Sum_probs=30.1
Q ss_pred ceeEEeeeccCCCCcccccccCCCCccceeeceeEeeeeeecceeeeEEee
Q 009748 344 SNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKT 394 (527)
Q Consensus 344 ~NV~I~n~~~~~g~GI~IGs~g~~~~~~~v~nI~v~Ni~i~~~~~Gi~Ikt 394 (527)
.|=.|+|.....+.|+-+|-.| ..+.|+||++++|. ..|+.+++
T Consensus 308 ~nHii~Ni~~~~~lGVG~~~DG---~~~~v~ni~~~dca----g~G~~~~~ 351 (543)
T 3riq_A 308 TQHIIRNIITRDCMGIGAWWDG---QKNIIDNVVTYEAH----KEGMFDRG 351 (543)
T ss_dssp CCCEEEEEEEESCSSCSSEECS---SSCEEEEEEEESCS----SCSEEECS
T ss_pred hhhhhhhhheeccceeeeeecC---CCCeEeeEEeeccc----cCcceeec
Confidence 5667778777777788877554 45778888888773 34555543
No 93
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=38.01 E-value=3.2e+02 Score=27.25 Aligned_cols=39 Identities=23% Similarity=0.249 Sum_probs=28.7
Q ss_pred ccccccCCCCCCCcceEEEeeeeeEEEEEEEEecCCcce
Q 009748 249 IRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCH 287 (527)
Q Consensus 249 ~~~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~ 287 (527)
|+.++.+.....+.-.+.|..+.|..|+|+.-+|-|+++
T Consensus 202 irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfg 240 (542)
T 2x3h_A 202 IRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFG 240 (542)
T ss_dssp EEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTE
T ss_pred cccceeccccccccceEEeccchhhhhhhhhhhcCCccc
Confidence 344554444444555788888999999999999999876
No 94
>3dl8_E Protein-export membrane protein SECG; RECA-type ATPase membrane protein translocation protein- protein complex, ATP-binding, cell membrane; 7.50A {Aquifex aeolicus}
Probab=36.62 E-value=13 Score=31.38 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=10.7
Q ss_pred chhhHHHHHHHHHHhccccc
Q 009748 6 FRSLAFLFLIAFLVWSASFE 25 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~ 25 (527)
|.++|..+.++|++++..+.
T Consensus 51 L~K~T~ilailF~v~sl~L~ 70 (107)
T 3dl8_E 51 LTKATYWLGALFLVLALLLS 70 (107)
T ss_dssp TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55666655555555444433
No 95
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=35.94 E-value=3.6e+02 Score=27.35 Aligned_cols=70 Identities=20% Similarity=0.261 Sum_probs=41.7
Q ss_pred CceeEEeeeccC-C-CCcccccccC--CC--Cc-----------cceeeceeEeeeeeecceeeeEEeeeccCcceeeeE
Q 009748 343 CSNVYVHNVNCG-P-GHGISIGSLG--KD--NT-----------KACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGV 405 (527)
Q Consensus 343 s~NV~I~n~~~~-~-g~GI~IGs~g--~~--~~-----------~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI 405 (527)
+-|+.+++...- + -+|+.+|+.. .. ++ ..--.|=.|.|+-+.++ -|+.+.- +|..++|+||
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GM-DG~G~YVSNi 349 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGM-DGSGGYVSNV 349 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEE-EEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 467888887643 2 3567776642 10 01 11124666788777766 3444433 3556799999
Q ss_pred EeeeeEeee
Q 009748 406 LFSNIQVSE 414 (527)
Q Consensus 406 ~f~Ni~v~~ 414 (527)
+++++.-.+
T Consensus 350 tv~DCAGsG 358 (559)
T 2v5i_A 350 TVQDCAGAG 358 (559)
T ss_dssp EEESCSSEE
T ss_pred EehhccCcc
Confidence 999887654
No 96
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=34.69 E-value=3.8e+02 Score=27.21 Aligned_cols=70 Identities=14% Similarity=0.168 Sum_probs=41.4
Q ss_pred CceeEEeeeccC-C-CCcccccccC--CC--Cc-----------cceeeceeEeeeeeecceeeeEEeeeccCcceeeeE
Q 009748 343 CSNVYVHNVNCG-P-GHGISIGSLG--KD--NT-----------KACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGV 405 (527)
Q Consensus 343 s~NV~I~n~~~~-~-g~GI~IGs~g--~~--~~-----------~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI 405 (527)
+-|+.+++...- + -+|+.+|+.. .. ++ ..--.|=.|.|+-+.++ -|+.+.- +|..++|+||
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GM-DG~G~YVSNi 346 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGM-DGKGMYVSNI 346 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEE-EEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 467888877643 2 3567776642 11 01 11124666777777766 3444433 3556799999
Q ss_pred EeeeeEeee
Q 009748 406 LFSNIQVSE 414 (527)
Q Consensus 406 ~f~Ni~v~~ 414 (527)
+++++.-.+
T Consensus 347 tv~DCAGsG 355 (559)
T 2vfm_A 347 TVEDCAGSG 355 (559)
T ss_dssp EEESCSSEE
T ss_pred EehhccCcc
Confidence 999887654
No 97
>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis}
Probab=33.98 E-value=2e+02 Score=26.08 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=13.6
Q ss_pred eEEEEEEEEecCCcceeeecceeEEEEEEeeecC
Q 009748 272 NVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSS 305 (527)
Q Consensus 272 nv~I~giti~ns~~~~i~~~~c~nV~I~nv~I~s 305 (527)
+..++++.+.+...-.+.+ +++.++++.+..
T Consensus 34 ~~~~~~~~l~~~~l~~~~l---~~~~f~~~~~~~ 64 (214)
T 2w7z_A 34 NHLYQQIDLPNQEVRNLVF---RDAVFDHLSLAN 64 (214)
T ss_dssp SSEEEEEECCSCEEESCEE---EEEEEEEEECTT
T ss_pred CCEEecceeecCcccCCEe---ccCEEEcCEEeC
Confidence 3445555554432222322 234555555553
No 98
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=28.95 E-value=5.3e+02 Score=27.26 Aligned_cols=70 Identities=14% Similarity=0.168 Sum_probs=41.7
Q ss_pred CceeEEeeeccC-C-CCcccccccC--CC--Cc-----------cceeeceeEeeeeeecceeeeEEeeeccCcceeeeE
Q 009748 343 CSNVYVHNVNCG-P-GHGISIGSLG--KD--NT-----------KACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGV 405 (527)
Q Consensus 343 s~NV~I~n~~~~-~-g~GI~IGs~g--~~--~~-----------~~~v~nI~v~Ni~i~~~~~Gi~Ikt~~g~~G~V~NI 405 (527)
+-|+.+|+...- + -+|+.+|+.. .. ++ ..--.|=.|.|+-+.++ -|+.+.- +|.+++|+||
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gm-dg~g~yvsni 453 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGM-DGKGMYVSNI 453 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEE-EEESCEEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeee-cCCCceEeee
Confidence 467888887643 2 4567776652 11 01 11124666778777766 3444433 3556799999
Q ss_pred EeeeeEeee
Q 009748 406 LFSNIQVSE 414 (527)
Q Consensus 406 ~f~Ni~v~~ 414 (527)
+++++.-.+
T Consensus 454 tv~dcag~g 462 (666)
T 2xc1_A 454 TVEDCAGSG 462 (666)
T ss_dssp EEESCSSEE
T ss_pred EehhccCcc
Confidence 999887654
No 99
>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis}
Probab=27.75 E-value=1.5e+02 Score=26.83 Aligned_cols=10 Identities=20% Similarity=0.162 Sum_probs=4.5
Q ss_pred EEEEEEeeec
Q 009748 295 GVVVHDVSVS 304 (527)
Q Consensus 295 nV~I~nv~I~ 304 (527)
++.++++.+.
T Consensus 74 ~~~f~~~~l~ 83 (214)
T 2w7z_A 74 NVRFEACDFS 83 (214)
T ss_dssp EEEEESCBCT
T ss_pred CCEEEeeECc
Confidence 3444444444
No 100
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=27.52 E-value=8.4 Score=25.64 Aligned_cols=17 Identities=29% Similarity=0.757 Sum_probs=9.4
Q ss_pred HHHHHhcccccceecccccccccCC
Q 009748 15 IAFLVWSASFETCNARRGRHWRHGR 39 (527)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~ 39 (527)
++|+++-+.|. +||..|
T Consensus 18 vif~~lg~tfl--------ywrgrr 34 (40)
T 2l9u_A 18 VIFMMLGGTFL--------YWRGRR 34 (40)
T ss_dssp HHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHhCceeE--------EEcccc
Confidence 34444545554 787655
No 101
>3vu7_H DNA repair protein REV1; DNA replication, translesion DNA synthesis, damage tolerance, DNA repair, replication; HET: DNA; 2.80A {Homo sapiens} PDB: 2lsj_A*
Probab=26.37 E-value=15 Score=31.66 Aligned_cols=14 Identities=21% Similarity=0.503 Sum_probs=8.3
Q ss_pred CcchHHHHHHHHhc
Q 009748 123 SDDTKAFEAAWAAA 136 (527)
Q Consensus 123 tDdt~Aiq~Ai~~a 136 (527)
..|-+.+.++|-.+
T Consensus 38 l~evK~lL~~Wv~s 51 (124)
T 3vu7_H 38 FNDVKTLLREWITT 51 (124)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc
Confidence 44566666666643
No 102
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=22.37 E-value=3.1e+02 Score=28.36 Aligned_cols=81 Identities=15% Similarity=0.160 Sum_probs=44.0
Q ss_pred EEeeeeeEEEEEEEEecCCcc--------eeee-cceeEEEEEEeeecCCCCCCCCCceeee-----------cccceEE
Q 009748 266 RFYGSFNVTVTGITIQNSPQC--------HLKF-DNCIGVVVHDVSVSSPGDSPNTDGIHLQ-----------NSKDVLI 325 (527)
Q Consensus 266 ~~~~~~nv~I~giti~ns~~~--------~i~~-~~c~nV~I~nv~I~s~~~~~ntDGI~i~-----------~s~nV~I 325 (527)
.+...+++.++||+|+|.... .+-+ ..++.+.+.+|.|.+. .|-+... ...+-..
T Consensus 196 ~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G~-----QDTLy~~~~~~~~~~~~d~~gRqyy 270 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGR-----QNTFFVTNSGVQNRLETNRQPRTLV 270 (422)
T ss_dssp EEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEECS-----TTCEEECCCCTTCSCCSSCCCEEEE
T ss_pred EEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEee-----cceeeeccccccccccccccccEEE
Confidence 445678999999999987432 1111 2456666666666652 2333321 1234556
Q ss_pred EecccccCCceeEeccCCceeEEeeeccC
Q 009748 326 HTSNLACGDDCVSIQTGCSNVYVHNVNCG 354 (527)
Q Consensus 326 ~n~~i~~gDD~Iai~sgs~NV~I~n~~~~ 354 (527)
++|.|...-|=|.= .-..++++|.+.
T Consensus 271 ~~CyIeGtVDFIFG---~a~AvFe~C~I~ 296 (422)
T 3grh_A 271 TNSYIEGDVDIVSG---RGAVVFDNTEFR 296 (422)
T ss_dssp ESCEEEESEEEEEE---SSEEEEESCEEE
T ss_pred EecEEeccccEEcc---CceEEEEeeEEE
Confidence 66666654443321 235556666553
Done!