Query 009749
Match_columns 527
No_of_seqs 357 out of 1608
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 12:08:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009749.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009749hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.3 3.6E-13 2.6E-17 111.0 4.6 54 109-170 22-75 (86)
2 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.3 4.8E-13 3.5E-17 113.3 2.4 56 109-170 20-75 (103)
3 d2baya1 g.44.1.2 (A:1-56) Pre- 99.2 1.6E-12 1.2E-16 98.4 3.4 52 111-171 1-53 (56)
4 d2c2la2 g.44.1.2 (A:225-304) S 99.2 2.9E-12 2.1E-16 103.6 4.5 56 107-170 4-59 (80)
5 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 99.2 4.4E-12 3.2E-16 102.0 5.3 56 107-170 5-60 (78)
6 d1fbva4 g.44.1.1 (A:356-434) C 99.2 4.8E-12 3.5E-16 102.4 4.9 51 109-167 22-72 (79)
7 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.2 4.3E-12 3.1E-16 98.9 3.7 56 109-172 2-62 (65)
8 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.1 3.8E-12 2.8E-16 106.6 0.2 70 90-170 2-72 (97)
9 d1chca_ g.44.1.1 (A:) Immediat 99.0 6.6E-11 4.8E-15 92.7 3.9 46 110-164 5-51 (68)
10 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.0 8E-11 5.8E-15 87.6 3.3 47 111-165 1-51 (52)
11 d1bora_ g.44.1.1 (A:) Acute pr 98.9 4.7E-11 3.4E-15 90.3 -0.0 47 109-167 5-51 (56)
12 d1iyma_ g.44.1.1 (A:) EL5 RING 98.9 2E-10 1.4E-14 86.5 2.9 47 108-163 3-53 (55)
13 d1wgma_ g.44.1.2 (A:) Ubiquiti 98.9 3.9E-10 2.8E-14 94.6 5.1 56 107-171 19-75 (98)
14 d1v87a_ g.44.1.1 (A:) Deltex p 98.8 1.4E-09 1E-13 92.9 5.6 54 109-166 24-95 (114)
15 d3dplr1 g.44.1.1 (R:19-106) RI 98.6 1.3E-08 9.7E-13 83.2 3.5 47 110-165 21-85 (88)
16 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.5 4.2E-08 3.1E-12 74.4 3.9 52 107-165 3-59 (60)
17 d1wima_ g.44.1.1 (A:) UbcM4-in 98.2 2.3E-07 1.6E-11 76.1 1.6 53 108-161 3-58 (94)
18 d2cs3a1 g.44.1.3 (A:8-87) Prot 92.9 0.042 3.1E-06 41.8 3.8 37 108-144 6-46 (80)
19 d1wila_ g.50.1.3 (A:) Hypothet 56.4 7.6 0.00055 29.9 4.9 52 109-161 14-75 (89)
20 d1r11a3 d.75.1.1 (A:3-60) Dime 52.9 2.6 0.00019 29.1 1.5 18 439-456 21-38 (58)
21 d1joca1 g.50.1.1 (A:1348-1411) 46.0 2.7 0.0002 30.5 0.8 31 109-139 7-41 (64)
22 d2jnea1 g.41.18.1 (A:1-71) Hyp 45.2 0.27 2E-05 37.2 -5.1 41 110-164 2-42 (71)
23 d1z60a1 g.49.1.2 (A:328-386) T 44.4 5.7 0.00042 28.7 2.3 42 109-159 14-58 (59)
24 d1wd2a_ g.44.1.1 (A:) Ariadne- 41.4 1.4 0.0001 32.0 -1.6 33 110-142 6-46 (60)
25 d1dvpa2 g.50.1.1 (A:149-220) H 39.5 5.4 0.0004 29.6 1.6 29 111-139 14-46 (72)
26 d1zbdb_ g.50.1.1 (B:) Effector 34.6 5.7 0.00041 32.4 1.1 50 107-161 45-99 (124)
27 d2epqa1 g.37.1.1 (A:380-411) P 34.4 5.6 0.00041 24.6 0.7 13 109-121 2-14 (32)
28 d1vfya_ g.50.1.1 (A:) vps27p p 33.6 6.9 0.0005 28.5 1.3 28 111-138 6-37 (67)
29 d1weoa_ g.44.1.1 (A:) Cellulos 32.8 37 0.0027 26.0 5.4 48 109-164 15-69 (93)
30 d2fiya1 e.59.1.1 (A:19-308) Fd 32.4 1.5 0.00011 41.7 -3.5 43 110-161 164-212 (290)
31 d1y02a2 g.50.1.1 (A:20-70) Rif 28.7 7.7 0.00056 26.9 0.8 27 112-138 2-32 (51)
32 d1f62a_ g.50.1.2 (A:) Williams 26.7 11 0.0008 25.5 1.3 45 112-161 2-49 (51)
33 d2ct7a1 g.44.1.4 (A:8-80) Ring 26.6 5.1 0.00037 29.6 -0.6 32 109-140 17-54 (73)
34 d1wfka_ g.50.1.1 (A:) Zinc fin 23.3 13 0.00095 28.5 1.3 54 108-163 7-64 (88)
35 d1yuza2 g.41.5.1 (A:167-202) N 20.1 21 0.0015 23.0 1.6 10 153-162 20-29 (36)
No 1
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.32 E-value=3.6e-13 Score=110.96 Aligned_cols=54 Identities=35% Similarity=0.637 Sum_probs=47.5
Q ss_pred CcccccccCcCCCCceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCCCcee
Q 009749 109 LSVQCPICLEYPLCPQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSKELYT 170 (527)
Q Consensus 109 e~~~CPICle~~~~P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~~L~~ 170 (527)
+.+.||||++.+.+|++++|||+||+.||.+|++... .+||+||.++...++.+
T Consensus 22 ~~l~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~--------~~CP~Cr~p~~~~~l~~ 75 (86)
T d1rmda2 22 KSISCQICEHILADPVETSCKHLFCRICILRCLKVMG--------SYCPSCRYPCFPTDLES 75 (86)
T ss_dssp HHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC--------SBCTTTCCBCCGGGCBC
T ss_pred cCcCCccCCcchhcceecCCCChhhHHHHHHHHhhCC--------CcCcccCCCCChhhccC
Confidence 3578999999999999999999999999999997532 68999999998877653
No 2
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=4.8e-13 Score=113.34 Aligned_cols=56 Identities=39% Similarity=0.747 Sum_probs=47.9
Q ss_pred CcccccccCcCCCCceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCCCcee
Q 009749 109 LSVQCPICLEYPLCPQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSKELYT 170 (527)
Q Consensus 109 e~~~CPICle~~~~P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~~L~~ 170 (527)
+.+.||||++.+..|++++|||+||..||..|+.... ....||+||..+...++++
T Consensus 20 ~~l~CpIC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~------~~~~CP~Cr~~~~~~~l~~ 75 (103)
T d1jm7a_ 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKK------GPSQCPLCKNDITKRSLQE 75 (103)
T ss_dssp HHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSS------SSCCCTTTSCCCCTTTCBC
T ss_pred cCcCCCccCchhCCeEEcCCCCchhhHHHHHHHHHCC------CCCcCcCCCCcCChhhCCc
Confidence 5688999999999999999999999999999998643 2368999999987766644
No 3
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.23 E-value=1.6e-12 Score=98.45 Aligned_cols=52 Identities=23% Similarity=0.296 Sum_probs=46.6
Q ss_pred ccccccCcCCCCceEc-CCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCCCceeE
Q 009749 111 VQCPICLEYPLCPQIT-SCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSKELYTI 171 (527)
Q Consensus 111 ~~CPICle~~~~P~it-~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~~L~~v 171 (527)
+.||||++.+.+|+++ .|||+||+.||.+|+... ..||+||.++..++|.++
T Consensus 1 l~C~Ic~~~~~~Pv~~~~cGh~fc~~cI~~~l~~~---------~~CP~c~~~l~~~dLipi 53 (56)
T d2baya1 1 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDT---------GNDPITNEPLSIEEIVEI 53 (56)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHH---------SBCTTTCCBCCGGGCEEC
T ss_pred CCCccCCchHHhcCccCCCCCcccHHHHHHHHhhc---------cCCCccCCcCCHHhceeC
Confidence 4699999999999987 699999999999999852 589999999999998764
No 4
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.22 E-value=2.9e-12 Score=103.64 Aligned_cols=56 Identities=20% Similarity=0.095 Sum_probs=49.8
Q ss_pred CCCcccccccCcCCCCceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCCCcee
Q 009749 107 NPLSVQCPICLEYPLCPQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSKELYT 170 (527)
Q Consensus 107 ~~e~~~CPICle~~~~P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~~L~~ 170 (527)
.++.+.||||++.+.+|++++|||+||..||.+|+.... ..||.|+.++...++.+
T Consensus 4 iP~~l~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~~~--------~~cP~c~~~l~~~~l~p 59 (80)
T d2c2la2 4 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG--------HFNPVTRSPLTQEQLIP 59 (80)
T ss_dssp CCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTC--------SSCTTTCCCCCGGGCEE
T ss_pred CCccccCcCcCchhhhhcccCCcCeecHHHHHHHHhcCC--------ccCCCcccccccccccc
Confidence 468899999999999999999999999999999997532 68999999998777765
No 5
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.21 E-value=4.4e-12 Score=101.97 Aligned_cols=56 Identities=30% Similarity=0.437 Sum_probs=49.6
Q ss_pred CCCcccccccCcCCCCceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCCCcee
Q 009749 107 NPLSVQCPICLEYPLCPQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSKELYT 170 (527)
Q Consensus 107 ~~e~~~CPICle~~~~P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~~L~~ 170 (527)
.++++.||||++.+.+|++++|||+||..||.+|+... ...||.|+.++...++.+
T Consensus 5 iP~~l~CpIc~~~m~dPV~~~cgh~fc~~ci~~~~~~~--------~~~cP~~~~~l~~~~l~p 60 (78)
T d1t1ha_ 5 FPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAG--------HKTCPKSQETLLHAGLTP 60 (78)
T ss_dssp CSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTT--------CCBCTTTCCBCSSCCCEE
T ss_pred CCccCCCcCcCchhhCceEccCCCcchHHHHHHHHHHC--------CCCCCcccccCCcccccc
Confidence 35789999999999999999999999999999999753 268999999998887765
No 6
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=4.8e-12 Score=102.36 Aligned_cols=51 Identities=29% Similarity=0.641 Sum_probs=44.2
Q ss_pred CcccccccCcCCCCceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCCC
Q 009749 109 LSVQCPICLEYPLCPQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSKE 167 (527)
Q Consensus 109 e~~~CPICle~~~~P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~~ 167 (527)
....||||++.+.+|++++|||.||..||..|+... ...||+||..|...+
T Consensus 22 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~~--------~~~CP~Cr~~i~~~~ 72 (79)
T d1fbva4 22 TFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESE--------GQGCPFCRCEIKGTE 72 (79)
T ss_dssp CTTBCTTTSSSBCCEECSSSCCEECHHHHHHHHHTT--------CCSCTTTCCCCCCCC
T ss_pred CCCCCccCCCcCCCeEEeCCCCeeeHHHHHHHHHHC--------cCcCCCCCcCccCCc
Confidence 345799999999999999999999999999999743 368999999997655
No 7
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=4.3e-12 Score=98.88 Aligned_cols=56 Identities=21% Similarity=0.491 Sum_probs=44.2
Q ss_pred CcccccccCcCCC-----CceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCCCceeEE
Q 009749 109 LSVQCPICLEYPL-----CPQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSKELYTIH 172 (527)
Q Consensus 109 e~~~CPICle~~~-----~P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~~L~~v~ 172 (527)
++..||||++.+. ..++++|||.||..||..|+... ...||+||.++..++++...
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~--------~~~CP~CR~~i~~~~~~~~~ 62 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRG--------AGNCPECGTPLRKSNFRVQL 62 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTT--------SSSCTTTCCCCSSCCCEEEC
T ss_pred CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcC--------cCCCCCCCcCcccccccccC
Confidence 4678999997532 22467999999999999999743 25799999999888876543
No 8
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=3.8e-12 Score=106.55 Aligned_cols=70 Identities=23% Similarity=0.507 Sum_probs=53.8
Q ss_pred CccccCcchhhhhhhcCCCCcccccccCcCCCCceE-cCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCCCc
Q 009749 90 DPDKMLQWEDIICVRYSNPLSVQCPICLEYPLCPQI-TSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSKEL 168 (527)
Q Consensus 90 dpd~~v~w~~I~~v~~~~~e~~~CPICle~~~~P~i-t~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~~L 168 (527)
+|+..-.|...........+.+.||||++.+.+|++ ++|||.||..||.+|+. ..||.||.++...++
T Consensus 2 ~p~~~~~~~~~~~~l~~l~~~l~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~-----------~~CP~Cr~~~~~~~l 70 (97)
T d1jm7b_ 2 EPDGRGAWAHSRAALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG-----------TGCPVCYTPAWIQDL 70 (97)
T ss_dssp CSSTTCCCHHHHHHHHHHHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT-----------TBCSSSCCBCSCSSC
T ss_pred CCCcccccHhHHHHHHhhhhcCCCccCCchhhcCceeCCCCCchhHHHHHHHHh-----------ccccccCCcCchhhC
Confidence 566666666554433333467899999999999986 58999999999999973 369999998877776
Q ss_pred ee
Q 009749 169 YT 170 (527)
Q Consensus 169 ~~ 170 (527)
.+
T Consensus 71 ~~ 72 (97)
T d1jm7b_ 71 KI 72 (97)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 9
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.01 E-value=6.6e-11 Score=92.71 Aligned_cols=46 Identities=39% Similarity=0.926 Sum_probs=39.2
Q ss_pred cccccccCcCCCCce-EcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 009749 110 SVQCPICLEYPLCPQ-ITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMIS 164 (527)
Q Consensus 110 ~~~CPICle~~~~P~-it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~ 164 (527)
.-.||||++.+..+. +++|||+||..||.+|+... ..||+||..+.
T Consensus 5 ~d~C~IC~~~~~~~~~~~~C~H~Fc~~Ci~~w~~~~---------~~CP~CR~~i~ 51 (68)
T d1chca_ 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQN---------PTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHS---------CSTTTTCCCCC
T ss_pred CCCCccCCcCccCCcEEeCCCCcCcHHHHHHHHHhC---------CcCCCCCcchH
Confidence 346999999987765 58999999999999999852 68999998764
No 10
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99 E-value=8e-11 Score=87.58 Aligned_cols=47 Identities=26% Similarity=0.455 Sum_probs=37.8
Q ss_pred ccccccCcCCCC----ceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccC
Q 009749 111 VQCPICLEYPLC----PQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISS 165 (527)
Q Consensus 111 ~~CPICle~~~~----P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~ 165 (527)
++||||++.+.. ++.++|||.||..||.+|+... ..+||+||.++..
T Consensus 1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~--------~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDE--------NGLCPACRKPYPE 51 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTS--------CCBCTTTCCBCSC
T ss_pred CCCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhc--------CCCCCccCCcCCC
Confidence 479999987743 3456899999999999998753 2589999998854
No 11
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93 E-value=4.7e-11 Score=90.35 Aligned_cols=47 Identities=23% Similarity=0.610 Sum_probs=39.7
Q ss_pred CcccccccCcCCCCceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCCC
Q 009749 109 LSVQCPICLEYPLCPQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSKE 167 (527)
Q Consensus 109 e~~~CPICle~~~~P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~~ 167 (527)
+.+.|+||++.+.+|++++|||+||..||.+| ...||+||..+....
T Consensus 5 ~~l~C~IC~~~~~~p~~lpCgH~fC~~Ci~~~------------~~~CP~Cr~~~~~~~ 51 (56)
T d1bora_ 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEAS------------GMQCPICQAPWPLGA 51 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSS------------SSSCSSCCSSSSCCS
T ss_pred CCCCCcccCcccCCCEEecCCCHHhHHHHHcC------------CCcCcCCCCcccCCC
Confidence 45799999999999999999999999998432 268999999886543
No 12
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=98.91 E-value=2e-10 Score=86.45 Aligned_cols=47 Identities=30% Similarity=0.658 Sum_probs=38.0
Q ss_pred CCcccccccCcCCCCc---e-EcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 009749 108 PLSVQCPICLEYPLCP---Q-ITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMI 163 (527)
Q Consensus 108 ~e~~~CPICle~~~~P---~-it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i 163 (527)
++...|+||++.+... + ++.|||.||..||.+|+.. ...||+||..+
T Consensus 3 ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~---------~~~CP~CR~~i 53 (55)
T d1iyma_ 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS---------HSTCPLCRLTV 53 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT---------CCSCSSSCCCS
T ss_pred CCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHh---------CCcCCCCCCEe
Confidence 3567899999988643 3 3479999999999999974 25899999876
No 13
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.91 E-value=3.9e-10 Score=94.58 Aligned_cols=56 Identities=13% Similarity=-0.005 Sum_probs=48.7
Q ss_pred CCCcccccccCcCCCCceEcCCCC-cccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCCCceeE
Q 009749 107 NPLSVQCPICLEYPLCPQITSCGH-IFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSKELYTI 171 (527)
Q Consensus 107 ~~e~~~CPICle~~~~P~it~CGH-iFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~~L~~v 171 (527)
.++.+.||||++.+.+|++++||| .||..||.+|+.. ...||+|+.++...+|.+.
T Consensus 19 ~P~~f~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~~---------~~~~P~~~~~l~~~~L~pN 75 (98)
T d1wgma_ 19 ACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS---------DQTDPFNRSPLTMDQIRPN 75 (98)
T ss_dssp CCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT---------SCBCTTTCSBCCTTTSEEC
T ss_pred CcHHhCCcCchhHHHHHHhcccccchhhHHHHHHHHHh---------cCCcccccccccchhhcch
Confidence 457899999999999999998775 8999999999964 2589999999998888763
No 14
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.82 E-value=1.4e-09 Score=92.91 Aligned_cols=54 Identities=30% Similarity=0.655 Sum_probs=40.8
Q ss_pred CcccccccCcCCCCc------------------eEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccCC
Q 009749 109 LSVQCPICLEYPLCP------------------QITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISSK 166 (527)
Q Consensus 109 e~~~CPICle~~~~P------------------~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~~ 166 (527)
.+..|+||++.+..+ .+++|||+||..||..|+...... ...+||+||..+..+
T Consensus 24 ~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~----~~~~CP~CR~~~~~~ 95 (114)
T d1v87a_ 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKD----GSLQCPSCKTIYGEK 95 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCS----SCCBCTTTCCBSSSC
T ss_pred ccccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcC----CCCccccccchhccC
Confidence 455799999876432 368999999999999999864311 236899999877443
No 15
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.56 E-value=1.3e-08 Score=83.17 Aligned_cols=47 Identities=28% Similarity=0.480 Sum_probs=36.5
Q ss_pred cccccccCcCCCC------------------ceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccC
Q 009749 110 SVQCPICLEYPLC------------------PQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISS 165 (527)
Q Consensus 110 ~~~CPICle~~~~------------------P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~ 165 (527)
.-.|+||++.+.. .+.++|||+||..||.+|+... ..||+||..+..
T Consensus 21 ~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~---------~~CP~CR~~~~~ 85 (88)
T d3dplr1 21 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR---------QVCPLDNREWEF 85 (88)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTC---------SBCSSSCSBCCE
T ss_pred CCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHC---------CcCCCCCCcccc
Confidence 3458999876542 2457899999999999999752 689999997743
No 16
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.46 E-value=4.2e-08 Score=74.36 Aligned_cols=52 Identities=19% Similarity=0.344 Sum_probs=41.1
Q ss_pred CCCcccccccCcCCCCceEcCC-----CCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccccC
Q 009749 107 NPLSVQCPICLEYPLCPQITSC-----GHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMISS 165 (527)
Q Consensus 107 ~~e~~~CPICle~~~~P~it~C-----GHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~~ 165 (527)
.++...|+||++.+..+.+.+| +|.||..||.+|+.... ...||+||..++.
T Consensus 3 ded~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~~-------~~~CP~Cr~~~~~ 59 (60)
T d1vyxa_ 3 DEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISR-------NTACQICGVVYNT 59 (60)
T ss_dssp TCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHT-------CSBCTTTCCBCCC
T ss_pred CCCCCCCccCCccCCCceeEecccCCCCCEEcHHHHHHHHhhCC-------CCCCcccCCeeec
Confidence 3466789999988877765554 69999999999997642 2689999998753
No 17
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.15 E-value=2.3e-07 Score=76.10 Aligned_cols=53 Identities=26% Similarity=0.442 Sum_probs=37.1
Q ss_pred CCcccccccCcCCCC---ceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcc
Q 009749 108 PLSVQCPICLEYPLC---PQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFV 161 (527)
Q Consensus 108 ~e~~~CPICle~~~~---P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~ 161 (527)
.....||||++.+.. +.++.|||.||..||..|+......+.. ...+||.|.-
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~-~~i~CP~~~C 58 (94)
T d1wima_ 3 SGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLE-TAISCPDAAC 58 (94)
T ss_dssp CSBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSC-CCEECSCTTC
T ss_pred CCCCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCc-cccCCcCCCC
Confidence 345789999987643 3466899999999999999864211111 2357998643
No 18
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.86 E-value=0.042 Score=41.85 Aligned_cols=37 Identities=30% Similarity=0.651 Sum_probs=31.5
Q ss_pred CCcccccccCcCCCCceEcCC----CCcccHHHHHHHHHcC
Q 009749 108 PLSVQCPICLEYPLCPQITSC----GHIFCFPCILQYLLMG 144 (527)
Q Consensus 108 ~e~~~CPICle~~~~P~it~C----GHiFC~~CI~~~l~~~ 144 (527)
...+.|.+|.+-+.+.....| +|.||++|-..+++..
T Consensus 6 ~~~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sik~q 46 (80)
T d2cs3a1 6 SGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKAQ 46 (80)
T ss_dssp CCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHHH
T ss_pred CCceeeeeehhhhcCCceEeCCCCcCCceeccccHHHHHhc
Confidence 456899999999988877666 7999999999999864
No 19
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.38 E-value=7.6 Score=29.88 Aligned_cols=52 Identities=15% Similarity=0.317 Sum_probs=33.3
Q ss_pred CcccccccCcCCCCceEc---CCCCcccHHHHHHHHHcCCCC-------CCCCCcCCCCCCcc
Q 009749 109 LSVQCPICLEYPLCPQIT---SCGHIFCFPCILQYLLMGDED-------YKGDCFKRCPLCFV 161 (527)
Q Consensus 109 e~~~CPICle~~~~P~it---~CGHiFC~~CI~~~l~~~~~~-------~k~~~~~~CPlCr~ 161 (527)
.+..|+|| +.+.+..+. -|+.+|+-.|+.+.-..+.+. .+-.....|+-|-.
T Consensus 14 ~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~gyl~~e~a~e~~e~A~T~~GWSC~~C~n 75 (89)
T d1wila_ 14 NDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred cCcccccc-CcccccceecceeecchhhHHHHHHhcccccHHHHHHHHhhcCCCCcchhhhcc
Confidence 56789999 666666654 479999999998863221110 11112367999954
No 20
>d1r11a3 d.75.1.1 (A:3-60) Dimeric tRNA splicing endonuclease, domains 1 and 3 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=52.85 E-value=2.6 Score=29.13 Aligned_cols=18 Identities=33% Similarity=0.558 Sum_probs=15.3
Q ss_pred CCCceeeeccccHHHHHH
Q 009749 439 IDGQHLILHPLNLKCLLH 456 (527)
Q Consensus 439 ~dgq~~~Lhpl~~k~L~~ 456 (527)
.-|..||||||.+--|+-
T Consensus 21 krgdkiylhplevvylqi 38 (58)
T d1r11a3 21 KRGDKIYLHPLEVVYLQI 38 (58)
T ss_dssp ESSSEEEECHHHHHHHHH
T ss_pred ccCCEEEeeeeeEEEEEE
Confidence 348999999999988874
No 21
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.00 E-value=2.7 Score=30.55 Aligned_cols=31 Identities=26% Similarity=0.523 Sum_probs=22.7
Q ss_pred CcccccccCcCCCCce----EcCCCCcccHHHHHH
Q 009749 109 LSVQCPICLEYPLCPQ----ITSCGHIFCFPCILQ 139 (527)
Q Consensus 109 e~~~CPICle~~~~P~----it~CGHiFC~~CI~~ 139 (527)
+...|.+|...|..-. --.||++||..|...
T Consensus 7 ~~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~ 41 (64)
T d1joca1 7 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 41 (64)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred cCCcCcCcCCcccCCccccchhhhCCeecccccCC
Confidence 4467999998775322 357999999999643
No 22
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=45.25 E-value=0.27 Score=37.19 Aligned_cols=41 Identities=24% Similarity=0.468 Sum_probs=27.6
Q ss_pred cccccccCcCCCCceEcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 009749 110 SVQCPICLEYPLCPQITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMIS 164 (527)
Q Consensus 110 ~~~CPICle~~~~P~it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~ 164 (527)
+..||.|..++.- .=||.+|..|-..|.. ...||-|..++.
T Consensus 2 ~~~CP~C~~eL~~----~~~~~~C~~C~~~~~~----------~a~CPdC~~~Le 42 (71)
T d2jnea1 2 ELHCPQCQHVLDQ----DNGHARCRSCGEFIEM----------KALCPDCHQPLQ 42 (71)
T ss_dssp CCBCSSSCSBEEE----ETTEEEETTTCCEEEE----------EEECTTTCSBCE
T ss_pred CCcCCCccCcccc----cCCCEehhhhhhhhee----------EEeCCccccHHH
Confidence 4679999976432 2277888888544332 268999988774
No 23
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.43 E-value=5.7 Score=28.65 Aligned_cols=42 Identities=21% Similarity=0.527 Sum_probs=29.3
Q ss_pred CcccccccCcCCCCce---EcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCC
Q 009749 109 LSVQCPICLEYPLCPQ---ITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLC 159 (527)
Q Consensus 109 e~~~CPICle~~~~P~---it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlC 159 (527)
....|--|+..+.+.. ...|+++||..|=. |+.. .-..||-|
T Consensus 14 ~~~~C~gC~~~l~~~~~y~C~~C~~~FC~dCD~-fiHe--------~lh~CpgC 58 (59)
T d1z60a1 14 GERFCYGCQGELKDQHVYVCAVCQNVFCVDCDV-FVHD--------SLHSCPGC 58 (59)
T ss_dssp SCCEETTTTEECTTSEEECCTTTTCCBCHHHHH-TTTT--------TSCSSSTT
T ss_pred CCCCccCCCCcCCCCceEECcCCCCccccccch-hhhh--------hhcCCCCC
Confidence 3567988987766554 35899999999943 2221 24789988
No 24
>d1wd2a_ g.44.1.1 (A:) Ariadne-1 protein homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.40 E-value=1.4 Score=32.03 Aligned_cols=33 Identities=21% Similarity=0.565 Sum_probs=22.7
Q ss_pred cccccccCcCCCCc----eEc----CCCCcccHHHHHHHHH
Q 009749 110 SVQCPICLEYPLCP----QIT----SCGHIFCFPCILQYLL 142 (527)
Q Consensus 110 ~~~CPICle~~~~P----~it----~CGHiFC~~CI~~~l~ 142 (527)
...||-|..+...- .|+ .||+.||+.|...|..
T Consensus 6 tK~CP~C~~~ieK~~GCnhM~C~~~~C~~~fCw~C~~~~~~ 46 (60)
T d1wd2a_ 6 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEP 46 (60)
T ss_dssp CCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGG
T ss_pred CcCCCCCCCeEEECCCCCCeEeCCCCCCCeEECCCCCcccc
Confidence 45799999876532 233 3899999999766543
No 25
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=39.51 E-value=5.4 Score=29.60 Aligned_cols=29 Identities=24% Similarity=0.580 Sum_probs=21.5
Q ss_pred ccccccCcCCCCce----EcCCCCcccHHHHHH
Q 009749 111 VQCPICLEYPLCPQ----ITSCGHIFCFPCILQ 139 (527)
Q Consensus 111 ~~CPICle~~~~P~----it~CGHiFC~~CI~~ 139 (527)
..|.+|...|..-. --.||++||..|...
T Consensus 14 ~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~ 46 (72)
T d1dvpa2 14 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAK 46 (72)
T ss_dssp SBCTTTCCBCCSSSCCEECTTTCCEECSTTSCE
T ss_pred CccccCCCcccCccccccccccCCeeChhhhCC
Confidence 46999998765321 357999999999643
No 26
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.59 E-value=5.7 Score=32.42 Aligned_cols=50 Identities=16% Similarity=0.351 Sum_probs=31.0
Q ss_pred CCCcccccccCcCCC---Cce--EcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcc
Q 009749 107 NPLSVQCPICLEYPL---CPQ--ITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFV 161 (527)
Q Consensus 107 ~~e~~~CPICle~~~---~P~--it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~ 161 (527)
......|++|...+. ... ...||++||..|-... .. ........|.+|..
T Consensus 45 ~~~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~~~~---~~--~~~~~~w~C~~C~k 99 (124)
T d1zbdb_ 45 GDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVET---SN--NRPHPVWLCKICLE 99 (124)
T ss_dssp SCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEEC---CC--SSSSCCEEEHHHHH
T ss_pred ccCCCcCcccCCcccCCCCCCCcCccCCcccccCCCCCc---cC--CCCCCCEECccCcc
Confidence 345578999997653 222 4689999999994221 11 11113477888865
No 27
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.38 E-value=5.6 Score=24.59 Aligned_cols=13 Identities=23% Similarity=0.416 Sum_probs=10.3
Q ss_pred CcccccccCcCCC
Q 009749 109 LSVQCPICLEYPL 121 (527)
Q Consensus 109 e~~~CPICle~~~ 121 (527)
..++||||..-|.
T Consensus 2 kp~~cpic~qrfk 14 (32)
T d2epqa1 2 KPYSCPVCGLRFK 14 (32)
T ss_dssp CSSEETTTTEECS
T ss_pred CCcccchHHHHhh
Confidence 4579999998765
No 28
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.59 E-value=6.9 Score=28.51 Aligned_cols=28 Identities=29% Similarity=0.482 Sum_probs=20.8
Q ss_pred ccccccCcCCCCce----EcCCCCcccHHHHH
Q 009749 111 VQCPICLEYPLCPQ----ITSCGHIFCFPCIL 138 (527)
Q Consensus 111 ~~CPICle~~~~P~----it~CGHiFC~~CI~ 138 (527)
..|.+|...|..-. --.||.+||..|..
T Consensus 6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~ 37 (67)
T d1vfya_ 6 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 37 (67)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred cccccCCCcccCcccccccccCCCEecccccC
Confidence 36999998775322 24799999999953
No 29
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=32.77 E-value=37 Score=26.03 Aligned_cols=48 Identities=23% Similarity=0.328 Sum_probs=33.0
Q ss_pred CcccccccCcCCC-----Cce--EcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 009749 109 LSVQCPICLEYPL-----CPQ--ITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMIS 164 (527)
Q Consensus 109 e~~~CPICle~~~-----~P~--it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i~ 164 (527)
....|.||-+..- .+. .-.|+--.|.+|..-=.+. ....||-|..+..
T Consensus 15 ~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErke--------G~q~CpqCkt~Yk 69 (93)
T d1weoa_ 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERRE--------GTQNCPQCKTRYK 69 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHT--------SCSSCTTTCCCCC
T ss_pred ccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhc--------cCccCcccCChhh
Confidence 4568999997643 122 2368888999997544433 2378999988764
No 30
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=32.41 E-value=1.5 Score=41.74 Aligned_cols=43 Identities=23% Similarity=0.552 Sum_probs=30.7
Q ss_pred cccccccCcCCCCceEcC----CC--CcccHHHHHHHHHcCCCCCCCCCcCCCCCCcc
Q 009749 110 SVQCPICLEYPLCPQITS----CG--HIFCFPCILQYLLMGDEDYKGDCFKRCPLCFV 161 (527)
Q Consensus 110 ~~~CPICle~~~~P~it~----CG--HiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~ 161 (527)
...||||-..+...++.. =| |.+|.-|-..|--. ..+||.|..
T Consensus 164 ~~~CPvCGs~P~~s~l~~~~~~~G~R~l~C~~C~teW~~~---------R~~C~~Cg~ 212 (290)
T d2fiya1 164 RTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYV---------RIKCSHCEE 212 (290)
T ss_dssp CSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECC---------TTSCSSSCC
T ss_pred CCcCCCCCCcchhheeeccCCCCCceEEECCCCCCccccc---------cccCCCCCC
Confidence 457999999988777643 33 55788887776432 269999964
No 31
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.68 E-value=7.7 Score=26.89 Aligned_cols=27 Identities=22% Similarity=0.512 Sum_probs=20.0
Q ss_pred cccccCcCCCCce----EcCCCCcccHHHHH
Q 009749 112 QCPICLEYPLCPQ----ITSCGHIFCFPCIL 138 (527)
Q Consensus 112 ~CPICle~~~~P~----it~CGHiFC~~CI~ 138 (527)
.|.+|...|..-. --.||.+||..|..
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~ 32 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSS 32 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEE
T ss_pred CccccCCcccCCccCcccccCCcccCccccC
Confidence 5888887775322 35799999999953
No 32
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.67 E-value=11 Score=25.46 Aligned_cols=45 Identities=22% Similarity=0.484 Sum_probs=27.4
Q ss_pred cccccCcCCCCceE---cCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcc
Q 009749 112 QCPICLEYPLCPQI---TSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFV 161 (527)
Q Consensus 112 ~CPICle~~~~P~i---t~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~ 161 (527)
.|.||...-....+ -.|...|+..|+..-+.... +....||.|+.
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p-----~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVP-----DGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCC-----SSCCSCTTTSC
T ss_pred CCcCcCCCCCCCCEEEcCCCCCCCCCCCCCCCCCcCC-----CCCEECcCCcC
Confidence 58888754322222 37899999999864332211 12357999974
No 33
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.64 E-value=5.1 Score=29.65 Aligned_cols=32 Identities=22% Similarity=0.454 Sum_probs=21.0
Q ss_pred CcccccccCcCCC----CceE--cCCCCcccHHHHHHH
Q 009749 109 LSVQCPICLEYPL----CPQI--TSCGHIFCFPCILQY 140 (527)
Q Consensus 109 e~~~CPICle~~~----~P~i--t~CGHiFC~~CI~~~ 140 (527)
...-||-|...+. .+.+ ..||+.||+.|-..|
T Consensus 17 ~~k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~w 54 (73)
T d2ct7a1 17 KFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQW 54 (73)
T ss_dssp CEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBC
T ss_pred CCCCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcch
Confidence 3456888875432 2333 379999999997665
No 34
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.28 E-value=13 Score=28.51 Aligned_cols=54 Identities=20% Similarity=0.420 Sum_probs=33.1
Q ss_pred CCcccccccCcCCCCc--e--EcCCCCcccHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 009749 108 PLSVQCPICLEYPLCP--Q--ITSCGHIFCFPCILQYLLMGDEDYKGDCFKRCPLCFVMI 163 (527)
Q Consensus 108 ~e~~~CPICle~~~~P--~--it~CGHiFC~~CI~~~l~~~~~~~k~~~~~~CPlCr~~i 163 (527)
.....|.+|...|.-- . --.||-+||..|........... ....+.|..|...+
T Consensus 7 ~~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~Cs~~~~~lp~~~--~~~~RVC~~C~~~l 64 (88)
T d1wfka_ 7 GMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAG--NTQQKVCKQCHTIL 64 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTT--SEEEEECHHHHHHH
T ss_pred cccCcCcccCchhccccccccccccChhhChHHhCCccccCCCC--CCCCeECHHHHHHH
Confidence 4567899999877532 2 34799999999975443332110 11235677776544
No 35
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=20.15 E-value=21 Score=22.96 Aligned_cols=10 Identities=50% Similarity=1.560 Sum_probs=7.6
Q ss_pred cCCCCCCccc
Q 009749 153 FKRCPLCFVM 162 (527)
Q Consensus 153 ~~~CPlCr~~ 162 (527)
..+||+|..+
T Consensus 20 Pe~CPvCg~~ 29 (36)
T d1yuza2 20 FEKCPICFRP 29 (36)
T ss_dssp CSBCTTTCCB
T ss_pred CCcCCCCCCc
Confidence 3689999765
Done!