Citrus Sinensis ID: 009750
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 527 | 2.2.26 [Sep-21-2011] | |||||||
| Q944A7 | 512 | Probable serine/threonine | yes | no | 0.963 | 0.992 | 0.789 | 0.0 | |
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.888 | 0.960 | 0.593 | 1e-167 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.882 | 1.0 | 0.494 | 1e-140 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.626 | 0.804 | 0.333 | 7e-40 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.540 | 0.691 | 0.341 | 5e-39 | |
| Q9SFT7 | 414 | Serine/threonine-protein | no | no | 0.618 | 0.787 | 0.315 | 2e-37 | |
| Q9FE20 | 456 | Serine/threonine-protein | no | no | 0.641 | 0.741 | 0.305 | 1e-36 | |
| Q8GXZ3 | 410 | Serine/threonine-protein | no | no | 0.525 | 0.675 | 0.335 | 1e-36 | |
| Q9LFP7 | 493 | Probable receptor-like pr | no | no | 0.540 | 0.578 | 0.314 | 1e-35 | |
| O49840 | 426 | Protein kinase 2B, chloro | no | no | 0.538 | 0.666 | 0.305 | 5e-35 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function desciption |
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Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/531 (78%), Positives = 453/531 (85%), Gaps = 23/531 (4%)
Query: 1 MGCCESTFLKGH-LSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGA---PAFAE 56
MGCC+S F + L D QN+ T NG G G G P+F+E
Sbjct: 1 MGCCQSLFSGDNPLGKDGVQPQPLSQNNHGGATTADNGGSGGASGVGGGGGGGGIPSFSE 60
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ 116
FS ADL+AATNNFSSD IVSESGEKAPN+VYKGRLQ NRRWIAVKKFTK AWP+PKQ
Sbjct: 61 FSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQ----NRRWIAVKKFTKMAWPEPKQ 116
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
FA+EAWGVGKLRH RLANLIGYCCDGDERLLVAE+MPNDTLAKHLFHWENQTIEWAMRLR
Sbjct: 117 FAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLR 176
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
V YIAEALDYCS+EGRPLYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYT
Sbjct: 177 VGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
Query: 237 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296
PPEYLRNGRVTPESV +SFGTVLLDLLSGKHIPPSH ALDMIRGKN
Sbjct: 237 PPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSH---------------ALDMIRGKN 281
Query: 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVM 356
I+ LMDSHLEG FS+EEATVV +LAS+CLQYEPRERPNTKDLV+TLAPLQ + DVPSYVM
Sbjct: 282 IILLMDSHLEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVM 341
Query: 357 LGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMR 416
LGI + EEAP TPQ PLSP+G+ACSRMDLTAIHQILVMTHY+DDEGTNELSFQEWTQQM+
Sbjct: 342 LGIKKQEEAPSTPQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMK 401
Query: 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDA 476
DML+ARKRGD +FREK+FKTA+DCYSQFIDVGTMVSPTV+ RRSLC+L+CDQPDAALRDA
Sbjct: 402 DMLDARKRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDA 461
Query: 477 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 527
MQAQCVYPDW TAFYMQ+VALAKL+M+ DAADML EAA LEEKRQR GRGS
Sbjct: 462 MQAQCVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQRGGRGS 512
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function description |
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Score = 590 bits (1521), Expect = e-167, Method: Compositional matrix adjust.
Identities = 295/497 (59%), Positives = 369/497 (74%), Gaps = 29/497 (5%)
Query: 25 QNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLADLRAATNNFSSDFIVSESGEKAPN 84
++ R++P EG G S+ P F EFS+ +R AT+ F+++ IVSE GE+APN
Sbjct: 16 ESGRSNPDVTGLDEEGRGE----SNDLPQFREFSIETIRNATSGFAAENIVSEHGERAPN 71
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VVYKG+L+ N+R IAVK+F + +WPD +QF +EA VG+LR+ R+ANL+G C + +E
Sbjct: 72 VVYKGKLE----NQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEE 127
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
RLL+AE+MPN+TLAKHLFHWE+Q ++WAMRLRVAL+IA+AL+YC+S+GR LYHDLNAYRV
Sbjct: 128 RLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRV 187
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS 264
LFD++ +PRLSCFGLMKNSRDGKSYSTNLA+TPPEYLR GRVTPESVI+SFGT+LLDLLS
Sbjct: 188 LFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 247
Query: 265 GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRC 324
GKHIPPSH ALD+IR +NI LMDS LEG FSS++ T + LASRC
Sbjct: 248 GKHIPPSH---------------ALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRC 292
Query: 325 LQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPMGDACSRMD 384
LQYEPRERPN K LVS + PLQ ++ S+ +LG+P LSP+G+AC R D
Sbjct: 293 LQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTT-----ALSPLGEACLRSD 347
Query: 385 LTAIHQILVMTHYKDDEG-TNELSFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQ 443
LTAIH+I+ YKDDEG T ELSFQ WT QM+D L +K+GD AFR K+F A++CYSQ
Sbjct: 348 LTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQ 407
Query: 444 FIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMH 503
FI+VGTM SPTV+AR+SLC+LM D P AL +AMQAQ + P W A Y+QAVAL+ L
Sbjct: 408 FIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQE 467
Query: 504 KDAADMLKEAASLEEKR 520
+A LK+ A LE KR
Sbjct: 468 NEAHTALKDGAMLESKR 484
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
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Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/520 (49%), Positives = 349/520 (67%), Gaps = 55/520 (10%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLA 60
MGCC S +VD H + ++P NG G D P +FS +
Sbjct: 1 MGCCYSL----SSTVDPVQDHT-----TDASSEPRNG--------GGED--PPLTKFSFS 41
Query: 61 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADE 120
L+ ATN+FS + IVS+ + +VV+KGRLQ+G ++A+K+F AW DPK F +E
Sbjct: 42 ALKTATNHFSPENIVSD---QTSDVVFKGRLQNGG----FVAIKRFNNMAWSDPKLFLEE 94
Query: 121 AWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180
A VGKLRHKRL NLIGYCCDGD+R LVA++M NDTLAK LF + QT++W++RLRVA +
Sbjct: 95 AQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYF 154
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY 240
+AEALDYC++ G Y++L+AY+VLFDE+GD LSCFGLMK + +
Sbjct: 155 VAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMKEINNDQ------------- 201
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300
+ G V PE+VI+ FGTVL++LLSGK IPPSH A +MI KN+ L
Sbjct: 202 ITTGSVNPENVIYRFGTVLVNLLSGKQIPPSH---------------APEMIHRKNVFKL 246
Query: 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 360
MD +L+G FS +EA VV+ LAS+CL+YE +E PNTK++V+TL LQ R + PSY ++ +
Sbjct: 247 MDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVEMT 306
Query: 361 RHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLE 420
E+ + + LSP+G+AC RMDL +IH ILV+ Y DD+ ELSF+EW Q+++++ +
Sbjct: 307 NQEKDASSSSN-LSPLGEACLRMDLASIHSILVLAGYDDDKDIIELSFEEWIQEVKELQD 365
Query: 421 ARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQ 480
R+ GD AF E++FKTA+ CYSQF++ ++V P+VYARRSL +L CD+P+ AL D M AQ
Sbjct: 366 VRRNGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMHAQ 425
Query: 481 CVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520
V+PDW TAFY+Q+VALAKLDM+ D+AD LKEAA LE K+
Sbjct: 426 GVFPDWPTAFYLQSVALAKLDMNTDSADTLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
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Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 182/372 (48%), Gaps = 42/372 (11%)
Query: 1 MGCCESTFLKGHLS-----VDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFA 55
MG C S +K S D K+ + +PS TEG +P
Sbjct: 1 MGICLSAQVKAESSGASTKYDAKDIGSLGSKASSVSVRPSPRTEGE------ILQSPNLK 54
Query: 56 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGN------DNRRWIAVKKFTKH 109
FS A+L++AT NF D ++ E G V+KG + + + IAVKK +
Sbjct: 55 SFSFAELKSATRNFRPDSVLGEGGF---GCVFKGWIDEKSLTASRPGTGLVIAVKKLNQD 111
Query: 110 AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH--WENQ 167
W +++ E +G+ H+ L LIGYC + + RLLV E+MP +L HLF Q
Sbjct: 112 GWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQ 171
Query: 168 TIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226
+ W +RL+VAL A+ L + SSE R +Y D +L D + +LS FGL K+ G
Sbjct: 172 PLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIG 231
Query: 227 -KSY-STNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-----KHIPPSHDMV 275
KS+ ST + Y PEYL G +T +S ++SFG VLL+LLSG K+ P +
Sbjct: 232 DKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNL 291
Query: 276 VWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT 335
V P ++ + I ++D+ L+ +S EEA V L+ RCL E + RPN
Sbjct: 292 VEWAKPY--------LVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNM 343
Query: 336 KDLVSTLAPLQN 347
++VS L +Q+
Sbjct: 344 SEVVSHLEHIQS 355
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 165/316 (52%), Gaps = 31/316 (9%)
Query: 51 APAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGN------DNRRWIAVK 104
+P F+ A+L+AAT NF D ++ E G + V+KG + + IAVK
Sbjct: 51 SPNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVK 107
Query: 105 KFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW 164
K + W +++ E +G+ H L LIGYC + + RLLV E+MP +L HLF
Sbjct: 108 KLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRR 167
Query: 165 EN--QTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221
+ Q + W +RL+VAL A+ L + ++E +Y D +L D + +LS FGL K
Sbjct: 168 GSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAK 227
Query: 222 NSRDG-KSY-STNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-----KHIPP 270
+ G KS+ ST + Y PEYL G +T +S ++S+G VLL++LSG K+ PP
Sbjct: 228 DGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPP 287
Query: 271 SHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPR 330
+V P+ N + + ++D+ L+ +S EEA V LA RCL +E +
Sbjct: 288 GEQKLVEWARPLLAN--------KRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIK 339
Query: 331 ERPNTKDLVSTLAPLQ 346
RPN ++VS L +Q
Sbjct: 340 LRPNMNEVVSHLEHIQ 355
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 165/364 (45%), Gaps = 38/364 (10%)
Query: 24 QQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFA--EFSLADLRAATNNFSSDFIVSESGEK 81
+ N++ HP P E + + A FS +L AT NF + ++ E G
Sbjct: 32 RDNNKTHPENPKTVNEQNKNNDEDKEVTNNIAAQTFSFRELATATKNFRQECLIGEGGFG 91
Query: 82 APNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD 141
VYKG+L+ +AVK+ ++ K+F E + L HK L NLIGYC D
Sbjct: 92 R---VYKGKLEKTG---MIVAVKQLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCAD 145
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTI--EWAMRLRVALYIAEALDYCSSEGRP--LYH 197
GD+RLLV EYM +L HL I +W R+R+AL A L+Y + P +Y
Sbjct: 146 GDQRLLVYEYMSRGSLEDHLLDLTPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYR 205
Query: 198 DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESV 251
DL A +L D + +LS FGL K G + Y PEY R G++T +S
Sbjct: 206 DLKAANILLDGEFNAKLSDFGLAKLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSD 265
Query: 252 IFSFGTVLLDLLSGKHIPPS------HDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305
++SFG VLL+L++G+ + + ++V W K L D L
Sbjct: 266 VYSFGVVLLELITGRRVIDTTRPKDEQNLVTWAQPVFK---------EPSRFPELADPSL 316
Query: 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEA 365
EG F + +A+ CLQ E RP D+V+ L L PD + +P H +
Sbjct: 317 EGVFPEKALNQAVAVAAMCLQEEATVRPLMSDVVTALGFLGTAPDGS----ISVP-HYDD 371
Query: 366 PPTP 369
PP P
Sbjct: 372 PPQP 375
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 180/386 (46%), Gaps = 48/386 (12%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQ-------PSNGTEGSGGLAAGSD---- 49
MGC ++ + +H Q ++ PT PS G + S GS
Sbjct: 1 MGCFSCFDSSDDEKLNPVDESNHGQKKQSQPTVSNNISGLPSGGEKLSSKTNGGSKRELL 60
Query: 50 ------GAPAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAV 103
G A F+ +L AAT NF D + E G VYKGRL + + +AV
Sbjct: 61 LPRDGLGQIAAHTFAFRELAAATMNFHPDTFLGEGGF---GRVYKGRL---DSTGQVVAV 114
Query: 104 KKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH 163
K+ ++ ++F E + L H L NLIGYC DGD+RLLV E+MP +L HL
Sbjct: 115 KQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHD 174
Query: 164 W--ENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGL 219
+ + ++W MR+++A A+ L++ + P +Y D + +L DE P+LS FGL
Sbjct: 175 LPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGL 234
Query: 220 MK--NSRDGKSYSTNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPS-- 271
K + D ST + Y PEY G++T +S ++SFG V L+L++G+ S
Sbjct: 235 AKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEM 294
Query: 272 ----HDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQY 327
++V W P+ FN + + L D L+G F + +AS C+Q
Sbjct: 295 PHGEQNLVAW-ARPL-FN-------DRRKFIKLADPRLKGRFPTRALYQALAVASMCIQE 345
Query: 328 EPRERPNTKDLVSTLAPLQNRPDVPS 353
+ RP D+V+ L+ L N+ PS
Sbjct: 346 QAATRPLIADVVTALSYLANQAYDPS 371
|
Protein kinase required for plant defense mechanism mediated by the disease resistance (R) protein RPS5. In case of infection by Pseudomonas syringae, RPS5 specifically recognizes the avrPphB type III effector avirulence protein and triggers a defense reaction. AvrPphB may trigger RPS5-mediated defense mechanism via the cleavage of PBS1. Both kinase activity and cleavage by avrPphB are independently required to trigger the RPS5-mediated resistance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 149/307 (48%), Gaps = 30/307 (9%)
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRW------IAVKKFTKHA 110
F+L +L T +F D+I+ E G VYKG + +DN R +AVK K
Sbjct: 57 FTLFELETITKSFRPDYILGEGGF---GTVYKGYI---DDNLRVGLKSLPVAVKVLNKEG 110
Query: 111 WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIE 170
+++ E +G+LRH L LIGYCC+ D RLLV E+M +L HLF +
Sbjct: 111 LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMLRGSLENHLFRKTTAPLS 170
Query: 171 WAMRLRVALYIAEALDYCSSEGRP-LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS- 228
W+ R+ +AL A+ L + + RP +Y D +L D + +LS FGL K G
Sbjct: 171 WSRRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET 230
Query: 229 -YSTNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK----HIPPSHDMVVWNT 279
ST + Y PEY+ G +T S ++SFG VLL++L+G+ PS + + +
Sbjct: 231 HVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEMLTGRKSVDKTRPSKEQNLVDW 290
Query: 280 VPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 339
K N + +L ++D LE +S A LA CL P+ RP D+V
Sbjct: 291 ARPKLN-------DKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 343
Query: 340 STLAPLQ 346
TL PLQ
Sbjct: 344 ETLEPLQ 350
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 164/318 (51%), Gaps = 33/318 (10%)
Query: 56 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGND------NRRWIAVKKFTKH 109
+F+ DL+ +T NF + ++ E G V+KG +++ +AVK
Sbjct: 129 KFTFNDLKLSTRNFRPESLLGEGGF---GCVFKGWIEENGTAPVKPGTGLTVAVKTLNPD 185
Query: 110 AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTI 169
K++ E +G L H L L+GYC + D+RLLV E+MP +L HLF + +
Sbjct: 186 GLQGHKEWLAEINFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPL 244
Query: 170 EWAMRLRVALYIAEALDYCSSEG-RP-LYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-G 226
W++R+++AL A+ L + E +P +Y D +L D + + +LS FGL K++ D G
Sbjct: 245 PWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEG 304
Query: 227 KSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-----KHIPPS-HDMV 275
K++ + Y PEY+ G +T +S ++SFG VLL++L+G K+ P H++V
Sbjct: 305 KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 364
Query: 276 VWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT 335
W ++ + L+D LEG+FS + A V LA++CL +P+ RP
Sbjct: 365 EW---------ARPHLLDKRRFYRLLDPRLEGHFSIKGAQKVTQLAAQCLSRDPKIRPKM 415
Query: 336 KDLVSTLAPLQNRPDVPS 353
D+V L PL + D+ S
Sbjct: 416 SDVVEALKPLPHLKDMAS 433
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 157/317 (49%), Gaps = 33/317 (10%)
Query: 51 APAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGN-------DNRRWIAV 103
+P F+ +L+ AT NF D ++ E G V+KG + DG + +AV
Sbjct: 65 SPNLKAFTFNELKNATRNFRPDSLLGEGGF---GYVFKGWI-DGTTLTASKPGSGIVVAV 120
Query: 104 KKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH 163
KK + K++ E +G+L H L L+GYC +G+ RLLV E+MP +L HLF
Sbjct: 121 KKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFR 180
Query: 164 WENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222
Q + WA+R++VA+ A+ L + ++ + +Y D A +L D + +LS FGL K
Sbjct: 181 RGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKA 240
Query: 223 SRDGKS--YSTNL----AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH------IPP 270
G ST + Y PEY+ GR+T +S ++SFG VLL+LLSG+ +
Sbjct: 241 GPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGM 300
Query: 271 SHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPR 330
+V W T + + + +MD+ L G + + A LA +CL + +
Sbjct: 301 EQSLVDWATPYLGDK---------RKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAK 351
Query: 331 ERPNTKDLVSTLAPLQN 347
RP ++++ L L++
Sbjct: 352 LRPKMSEVLAKLDQLES 368
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 527 | ||||||
| 255539170 | 513 | receptor protein kinase, putative [Ricin | 0.962 | 0.988 | 0.840 | 0.0 | |
| 147797812 | 508 | hypothetical protein VITISV_000979 [Viti | 0.956 | 0.992 | 0.841 | 0.0 | |
| 225459846 | 508 | PREDICTED: probable serine/threonine-pro | 0.956 | 0.992 | 0.839 | 0.0 | |
| 224061905 | 520 | predicted protein [Populus trichocarpa] | 0.965 | 0.978 | 0.839 | 0.0 | |
| 449452959 | 509 | PREDICTED: probable serine/threonine-pro | 0.960 | 0.994 | 0.820 | 0.0 | |
| 297744528 | 500 | unnamed protein product [Vitis vinifera] | 0.946 | 0.998 | 0.804 | 0.0 | |
| 224080762 | 499 | predicted protein [Populus trichocarpa] | 0.946 | 1.0 | 0.806 | 0.0 | |
| 224086008 | 469 | predicted protein [Populus trichocarpa] | 0.872 | 0.980 | 0.897 | 0.0 | |
| 359474808 | 514 | PREDICTED: probable serine/threonine-pro | 0.933 | 0.957 | 0.806 | 0.0 | |
| 224103071 | 498 | predicted protein [Populus trichocarpa] | 0.944 | 1.0 | 0.808 | 0.0 |
| >gi|255539170|ref|XP_002510650.1| receptor protein kinase, putative [Ricinus communis] gi|223551351|gb|EEF52837.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/533 (84%), Positives = 473/533 (88%), Gaps = 26/533 (4%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHH----QQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAE 56
MGCC S+ + + K +H+ Q +NH QP NG + A S G F
Sbjct: 1 MGCCHSSLFQVPFISEKKEPNHNYSKNQNQDQNH--QPPNGKGAACPPAGTSSG---FTI 55
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQ--DGNDNRRWIAVKKFTKHAWPDP 114
FS ADL+AATNNFSS+FIVSESGEKAPNVVYKGRLQ D N+NR WIAVKKFTK AWPDP
Sbjct: 56 FSFADLKAATNNFSSEFIVSESGEKAPNVVYKGRLQKQDNNNNRTWIAVKKFTKLAWPDP 115
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR 174
KQFADEA GVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR
Sbjct: 116 KQFADEALGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR 175
Query: 175 LRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 234
LRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA
Sbjct: 176 LRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 235
Query: 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294
YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH ALDMIRG
Sbjct: 236 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH---------------ALDMIRG 280
Query: 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSY 354
KNIL LMDSHLEGNFS++EATVVFDLAS+CLQYEPRERPNTKDLV+T+APLQN+PDVPSY
Sbjct: 281 KNILLLMDSHLEGNFSTDEATVVFDLASQCLQYEPRERPNTKDLVATVAPLQNKPDVPSY 340
Query: 355 VMLGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQ 414
VMLGIP+HEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQ
Sbjct: 341 VMLGIPKHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQ 400
Query: 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALR 474
MRDMLEARKRGDVAFR+K+FKTA+DCYSQFIDVGTM+SPTVYARRSLCHL+CDQPDAALR
Sbjct: 401 MRDMLEARKRGDVAFRDKDFKTAIDCYSQFIDVGTMISPTVYARRSLCHLLCDQPDAALR 460
Query: 475 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 527
DAMQAQCVYP+WSTAFYMQAVALAKLDMHKDAADML EAA+LEEKRQR G+GS
Sbjct: 461 DAMQAQCVYPEWSTAFYMQAVALAKLDMHKDAADMLNEAAALEEKRQRGGKGS 513
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147797812|emb|CAN74078.1| hypothetical protein VITISV_000979 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/531 (84%), Positives = 474/531 (89%), Gaps = 27/531 (5%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGA----PAFAE 56
MGCC+S+ K S K+R+ Q NH T PSNGT+ + G PAF+E
Sbjct: 1 MGCCQSSLFKRTRS--EKDRYP-QTTGLNH-TPPSNGTDAAAAGVGDGGGGAGGVPAFSE 56
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ 116
FSLADL+AATNNFSSDFIVSESGEKAPNVVYKGRLQ NRRWIAVKKFTK AWPDPKQ
Sbjct: 57 FSLADLKAATNNFSSDFIVSESGEKAPNVVYKGRLQ----NRRWIAVKKFTKLAWPDPKQ 112
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
FADEAWGVGKLRH+RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR
Sbjct: 113 FADEAWGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 172
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
VALYIAEALDYCS+EGRPLYHDLNAYRVLFDENGDPRLSCFG+MKNSRDGKSYSTNLAYT
Sbjct: 173 VALYIAEALDYCSAEGRPLYHDLNAYRVLFDENGDPRLSCFGMMKNSRDGKSYSTNLAYT 232
Query: 237 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296
PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH ALDMIRGKN
Sbjct: 233 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH---------------ALDMIRGKN 277
Query: 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVM 356
I LMDSHLEGNFS+EEATVVF+LAS+CLQYEPRERP+ ++LV TLAPLQN+PDVPSYVM
Sbjct: 278 IPLLMDSHLEGNFSTEEATVVFELASQCLQYEPRERPSPRNLVETLAPLQNKPDVPSYVM 337
Query: 357 LGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMR 416
LGIP+HEEAPPTPQHPLSPMGDAC+RMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMR
Sbjct: 338 LGIPKHEEAPPTPQHPLSPMGDACTRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMR 397
Query: 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDA 476
DMLEARKRGD+AFR+K+FKTA+DCYSQFIDVGTMVSPTVYARRSLC+L+CDQPD ALRDA
Sbjct: 398 DMLEARKRGDLAFRDKDFKTAIDCYSQFIDVGTMVSPTVYARRSLCYLLCDQPDTALRDA 457
Query: 477 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 527
MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADML EAA+LEEKRQR GRGS
Sbjct: 458 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLNEAAALEEKRQRGGRGS 508
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225459846|ref|XP_002285926.1| PREDICTED: probable serine/threonine-protein kinase At4g35230 isoform 1 [Vitis vinifera] gi|302141672|emb|CBI18875.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/531 (83%), Positives = 473/531 (89%), Gaps = 27/531 (5%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGA----PAFAE 56
MGCC+S+ K S K+R+ Q NH T PSNGT+ + PAF+E
Sbjct: 1 MGCCQSSLFKRTRS--DKDRYP-QTTGLNH-TPPSNGTDAAAAGVGDGGEGAGGVPAFSE 56
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ 116
FSLADL+AATNNFSSDFIVSESGEKAPNVVYKGRLQ NRRWIAVKKFTK AWPDPKQ
Sbjct: 57 FSLADLKAATNNFSSDFIVSESGEKAPNVVYKGRLQ----NRRWIAVKKFTKLAWPDPKQ 112
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
FADEAWGVGKLRH+RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR
Sbjct: 113 FADEAWGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 172
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
VALYIAEALDYCS+EGRPLYHDLNAYRVLFDENGDPRLSCFG+MKNSRDGKSYSTNLAYT
Sbjct: 173 VALYIAEALDYCSAEGRPLYHDLNAYRVLFDENGDPRLSCFGMMKNSRDGKSYSTNLAYT 232
Query: 237 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296
PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH ALDMIRGKN
Sbjct: 233 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH---------------ALDMIRGKN 277
Query: 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVM 356
I LMDSHLEGNFS+EEATVVF+LAS+CLQYEPRERP+ ++LV TLAPLQN+PDVPSYVM
Sbjct: 278 IPLLMDSHLEGNFSTEEATVVFELASQCLQYEPRERPSPRNLVETLAPLQNKPDVPSYVM 337
Query: 357 LGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMR 416
LGIP+HEEAPPTPQHPLSPMGDAC+RMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMR
Sbjct: 338 LGIPKHEEAPPTPQHPLSPMGDACTRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMR 397
Query: 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDA 476
DMLEARKRGD+AFR+K+FKTA+DCYSQFIDVGTMVSPTVYARRSLC+L+CDQPD ALRDA
Sbjct: 398 DMLEARKRGDLAFRDKDFKTAIDCYSQFIDVGTMVSPTVYARRSLCYLLCDQPDTALRDA 457
Query: 477 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 527
MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADML EAA+LEEKRQR GRGS
Sbjct: 458 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLNEAAALEEKRQRGGRGS 508
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224061905|ref|XP_002300657.1| predicted protein [Populus trichocarpa] gi|222842383|gb|EEE79930.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/536 (83%), Positives = 478/536 (89%), Gaps = 27/536 (5%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHR--------NHPTQPSNGTEGSGGLAAGSDGAP 52
MGCC+S+ K +S D+KN QQN + NH ++P+NGTE SGGL G G
Sbjct: 1 MGCCQSSLFKAPISDDSKNNQQQQQNQQQQPQHVRINHASRPTNGTETSGGLGGGC-GVL 59
Query: 53 AFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQ--DGNDNRRWIAVKKFTKHA 110
+F EFSLADL+AATNNFS +FIVSESGEKAPNVVYKGRLQ D N+NR WIAVKKFTK A
Sbjct: 60 SFTEFSLADLKAATNNFSPEFIVSESGEKAPNVVYKGRLQNHDNNNNRSWIAVKKFTKLA 119
Query: 111 WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIE 170
WPDPKQFADEA GVGKLRHKRLANLIG+CC GDERLLVAEY+PNDTLAKHLFHWENQTIE
Sbjct: 120 WPDPKQFADEALGVGKLRHKRLANLIGFCCVGDERLLVAEYLPNDTLAKHLFHWENQTIE 179
Query: 171 WAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS 230
WAMRLRVALYI+EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS DGKSYS
Sbjct: 180 WAMRLRVALYISEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSSDGKSYS 239
Query: 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALD 290
TNLAYTPPEYL+NGRVTPESVIFSFGTVLLDLLSGKHIPPSH ALD
Sbjct: 240 TNLAYTPPEYLQNGRVTPESVIFSFGTVLLDLLSGKHIPPSH---------------ALD 284
Query: 291 MIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 350
MIRGKNI LMDSHLEGNFS+EEATVVFDLAS+CLQYEPRERPNTKDLV+TLAPLQN+PD
Sbjct: 285 MIRGKNIRLLMDSHLEGNFSTEEATVVFDLASQCLQYEPRERPNTKDLVTTLAPLQNKPD 344
Query: 351 VPSYVMLGIPRHEE-APPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQ 409
VPSYVMLGI +HEE APPTPQHPLSPMGDAC+RMDLTAIHQILVMTHYKDDEGTNELSFQ
Sbjct: 345 VPSYVMLGISKHEETAPPTPQHPLSPMGDACTRMDLTAIHQILVMTHYKDDEGTNELSFQ 404
Query: 410 EWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQP 469
EWTQQMRDMLEARKRGDVAFR+K+FKTAV+CYSQFIDVGTMVSPTVYARRSLCHL+ DQP
Sbjct: 405 EWTQQMRDMLEARKRGDVAFRDKDFKTAVECYSQFIDVGTMVSPTVYARRSLCHLLSDQP 464
Query: 470 DAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525
DAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADML EAA+LEEK+QR GR
Sbjct: 465 DAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLNEAAALEEKKQRGGR 520
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452959|ref|XP_004144226.1| PREDICTED: probable serine/threonine-protein kinase At4g35230-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/530 (82%), Positives = 466/530 (87%), Gaps = 24/530 (4%)
Query: 1 MGCCESTFLKGH---LSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEF 57
MGCC S+ + H L N H QN N + PSNG+ L S G PAF+EF
Sbjct: 1 MGCCGSSLQRAHSLGLGAGKSNHIPHPQN--NFQSHPSNGSSDPAAL---SGGVPAFSEF 55
Query: 58 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQF 117
S ADL+AATNNFSSD+IVSESG+KAPNVV+KGRLQ+ N NRRWIAVKKF K AWPDPKQF
Sbjct: 56 SFADLKAATNNFSSDYIVSESGDKAPNVVFKGRLQNQN-NRRWIAVKKFAKFAWPDPKQF 114
Query: 118 ADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRV 177
+EA GVGKLRHKRLANLIGYCC+G+ER L+AEYMPNDTLAKHLFHWENQTIEWAMRLRV
Sbjct: 115 VEEASGVGKLRHKRLANLIGYCCEGEERFLIAEYMPNDTLAKHLFHWENQTIEWAMRLRV 174
Query: 178 ALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP 237
ALYIAEALDYCSS+ RPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP
Sbjct: 175 ALYIAEALDYCSSQERPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP 234
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297
PEYLRNGRVT ESVIFSFGTVLLDLLSGKHIPP H ALDMIRGKNI
Sbjct: 235 PEYLRNGRVTAESVIFSFGTVLLDLLSGKHIPPGH---------------ALDMIRGKNI 279
Query: 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVML 357
L LMDSHLEGNFS+ EATVVFDLASRCLQYEPR+RPNTKDLV+TLAPLQN+PDV SYVML
Sbjct: 280 LLLMDSHLEGNFSTGEATVVFDLASRCLQYEPRDRPNTKDLVATLAPLQNKPDVASYVML 339
Query: 358 GIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRD 417
GIP+HEEAPPTPQHPL+PMGDAC+RMDLTAIHQILVMTHYKDDE TNELSFQEWTQQMRD
Sbjct: 340 GIPKHEEAPPTPQHPLTPMGDACARMDLTAIHQILVMTHYKDDERTNELSFQEWTQQMRD 399
Query: 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAM 477
MLEARKRGD+AFR+K+FKTA+DCYSQFIDVGTMVSPTVYARRSLC+L+CDQPDAALRDAM
Sbjct: 400 MLEARKRGDLAFRDKDFKTAIDCYSQFIDVGTMVSPTVYARRSLCYLLCDQPDAALRDAM 459
Query: 478 QAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 527
QAQCVYPDWST+FYMQAVALAKLDM KDAADML EAA+LEEKRQ+ GRGS
Sbjct: 460 QAQCVYPDWSTSFYMQAVALAKLDMDKDAADMLNEAAALEEKRQKGGRGS 509
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297744528|emb|CBI37790.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/528 (80%), Positives = 467/528 (88%), Gaps = 29/528 (5%)
Query: 1 MGCCESTFL-KGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSL 59
MGCCES+FL + H D ++ H++ N +N P P + +G G P+F+EFS
Sbjct: 1 MGCCESSFLTETHPEKDDQHHHNNSHNTQNPPFSPPSPADG---------GVPSFSEFSF 51
Query: 60 ADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD 119
+DL+AATNNFSSD IVSESGEKAPN+VYKGRLQ NRRWIAVKKFTK AWPDPKQFA+
Sbjct: 52 SDLKAATNNFSSDSIVSESGEKAPNIVYKGRLQ----NRRWIAVKKFTKMAWPDPKQFAE 107
Query: 120 EAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL 179
EAWGVG+LRH+RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL
Sbjct: 108 EAWGVGRLRHQRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL 167
Query: 180 YIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 239
+IAEALD+CS+E R LYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYTPPE
Sbjct: 168 FIAEALDFCSTESRSLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 227
Query: 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299
YLRNGRVTPESVI+SFGTVLLDLLSGKHIPPSH ALD+IR KNI+
Sbjct: 228 YLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSH---------------ALDLIRDKNIIL 272
Query: 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGI 359
LMDSHLEGNFS+EEAT V LAS+CLQYEPRERPNTKDLV+TLAPL+ +PDVPSYVMLGI
Sbjct: 273 LMDSHLEGNFSTEEATTVVGLASQCLQYEPRERPNTKDLVATLAPLKTKPDVPSYVMLGI 332
Query: 360 PRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDML 419
P+HE+APPTPQHPLSPMG+ACSR+DLTAIHQILVMTHY+DDEGTNELSFQEWTQQMRDML
Sbjct: 333 PKHEDAPPTPQHPLSPMGEACSRLDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDML 392
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
EARKRGD AFR+K+FKTA+DCYSQF+DVGTMVSPTVYARRSLC+L+CDQPDAALRDAMQA
Sbjct: 393 EARKRGDFAFRDKDFKTAIDCYSQFVDVGTMVSPTVYARRSLCYLLCDQPDAALRDAMQA 452
Query: 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 527
QCVYPDW TAFYMQ+VALAKLDMHKDAADML EAA LEEKRQ+ GRGS
Sbjct: 453 QCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAGLEEKRQKGGRGS 500
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224080762|ref|XP_002306223.1| predicted protein [Populus trichocarpa] gi|222849187|gb|EEE86734.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/527 (80%), Positives = 459/527 (87%), Gaps = 28/527 (5%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLA 60
MGCC S+FL H + + + H QP GS L + G P+F EFS +
Sbjct: 1 MGCCSSSFLS--------ETHPEKDHKKTHQQQPPRNPSGSAVLDPAT-GVPSFCEFSFS 51
Query: 61 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADE 120
DL+ ATNNFSSD IVSESGEKAPN+VYKGRLQ NRRWIAVKKFTK AWPDPKQFA+E
Sbjct: 52 DLKTATNNFSSDNIVSESGEKAPNLVYKGRLQ----NRRWIAVKKFTKMAWPDPKQFAEE 107
Query: 121 AWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180
AWGVGKLRHK+LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY
Sbjct: 108 AWGVGKLRHKKLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 167
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY 240
IAEALDYCSSEGRPLYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY
Sbjct: 168 IAEALDYCSSEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY 227
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300
LRNGRVTPESVI+SFGTVLLDLLSGKHIPPS A+DMIRGKNI+ L
Sbjct: 228 LRNGRVTPESVIYSFGTVLLDLLSGKHIPPSR---------------AIDMIRGKNIILL 272
Query: 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 360
MDSHLEGNFS+EEAT+V LAS+CLQYEPRERP+TKDLV+TLAPLQ +PDVPSYVMLGI
Sbjct: 273 MDSHLEGNFSTEEATLVVGLASQCLQYEPRERPSTKDLVTTLAPLQTKPDVPSYVMLGIS 332
Query: 361 RHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLE 420
+HEEAP TPQ PLSPMG+ACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLE
Sbjct: 333 KHEEAPATPQRPLSPMGEACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLE 392
Query: 421 ARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQ 480
+RKRGD AFR+K+FKTA+DCYSQFIDVGTMVSPTV+ARRSLC+L+CDQPDAALRDAMQAQ
Sbjct: 393 SRKRGDFAFRDKDFKTAIDCYSQFIDVGTMVSPTVFARRSLCYLLCDQPDAALRDAMQAQ 452
Query: 481 CVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 527
CVYPDW TAFYMQ+VALAKLDMH DAADML EAA+LEEK+QR G+GS
Sbjct: 453 CVYPDWPTAFYMQSVALAKLDMHNDAADMLNEAAALEEKKQRGGKGS 499
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224086008|ref|XP_002307775.1| predicted protein [Populus trichocarpa] gi|222857224|gb|EEE94771.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/477 (89%), Positives = 445/477 (93%), Gaps = 17/477 (3%)
Query: 51 APAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRR--WIAVKKFTK 108
P+F EFS ADL+AATNNFS +FIVSESGEKA NVVYKGRLQ+ N++ WIAVKKFTK
Sbjct: 8 VPSFTEFSFADLKAATNNFSPEFIVSESGEKASNVVYKGRLQNQNNSNNRSWIAVKKFTK 67
Query: 109 HAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT 168
AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTL+KHLFHWENQT
Sbjct: 68 LAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLSKHLFHWENQT 127
Query: 169 IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228
IEWAMRLRVALYI EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS DGKS
Sbjct: 128 IEWAMRLRVALYITEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSMDGKS 187
Query: 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGA 288
YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH A
Sbjct: 188 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH---------------A 232
Query: 289 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348
LDMIRGKNIL LMDSHLEGNFS+EEATVVFDLASRCLQYEP ERPNTKDLV+TLAPLQN+
Sbjct: 233 LDMIRGKNILLLMDSHLEGNFSTEEATVVFDLASRCLQYEPGERPNTKDLVTTLAPLQNK 292
Query: 349 PDVPSYVMLGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSF 408
PDV SYVMLGIP+HEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSF
Sbjct: 293 PDVLSYVMLGIPKHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSF 352
Query: 409 QEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ 468
QEWTQQMRDMLEARKRGDVAFR+K+FKTAV+CYSQFIDVGTMVSPTVYARRSLCHL+CDQ
Sbjct: 353 QEWTQQMRDMLEARKRGDVAFRDKDFKTAVECYSQFIDVGTMVSPTVYARRSLCHLLCDQ 412
Query: 469 PDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525
PDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADML EAA+LEEK+QRSGR
Sbjct: 413 PDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLNEAATLEEKKQRSGR 469
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359474808|ref|XP_002281613.2| PREDICTED: probable serine/threonine-protein kinase At4g35230 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/521 (80%), Positives = 461/521 (88%), Gaps = 29/521 (5%)
Query: 1 MGCCESTFL-KGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSL 59
MGCCES+FL + H D ++ H++ N +N P P + +G G P+F+EFS
Sbjct: 1 MGCCESSFLTETHPEKDDQHHHNNSHNTQNPPFSPPSPADG---------GVPSFSEFSF 51
Query: 60 ADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD 119
+DL+AATNNFSSD IVSESGEKAPN+VYKGRLQ NRRWIAVKKFTK AWPDPKQFA+
Sbjct: 52 SDLKAATNNFSSDSIVSESGEKAPNIVYKGRLQ----NRRWIAVKKFTKMAWPDPKQFAE 107
Query: 120 EAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL 179
EAWGVG+LRH+RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL
Sbjct: 108 EAWGVGRLRHQRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAL 167
Query: 180 YIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 239
+IAEALD+CS+E R LYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYTPPE
Sbjct: 168 FIAEALDFCSTESRSLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPE 227
Query: 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299
YLRNGRVTPESVI+SFGTVLLDLLSGKHIPPSH ALD+IR KNI+
Sbjct: 228 YLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSH---------------ALDLIRDKNIIL 272
Query: 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGI 359
LMDSHLEGNFS+EEAT V LAS+CLQYEPRERPNTKDLV+TLAPL+ +PDVPSYVMLGI
Sbjct: 273 LMDSHLEGNFSTEEATTVVGLASQCLQYEPRERPNTKDLVATLAPLKTKPDVPSYVMLGI 332
Query: 360 PRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDML 419
P+HE+APPTPQHPLSPMG+ACSR+DLTAIHQILVMTHY+DDEGTNELSFQEWTQQMRDML
Sbjct: 333 PKHEDAPPTPQHPLSPMGEACSRLDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDML 392
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
EARKRGD AFR+K+FKTA+DCYSQF+DVGTMVSPTVYARRSLC+L+CDQPDAALRDAMQA
Sbjct: 393 EARKRGDFAFRDKDFKTAIDCYSQFVDVGTMVSPTVYARRSLCYLLCDQPDAALRDAMQA 452
Query: 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520
QCVYPDW TAFYMQ+VALAKLDMHKDAADML EAA LEEKR
Sbjct: 453 QCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAGLEEKR 493
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224103071|ref|XP_002312914.1| predicted protein [Populus trichocarpa] gi|222849322|gb|EEE86869.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/527 (80%), Positives = 457/527 (86%), Gaps = 29/527 (5%)
Query: 1 MGCCESTFLKGHLSVDTKNRHHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLA 60
MGCC S+ L +T H++ H+ HP PS GS L + G P+F EFS
Sbjct: 1 MGCCCSSIL-----AETHPEKDHKKTHQQHPLNPS----GSIVLDPAT-GIPSFCEFSFP 50
Query: 61 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADE 120
DL+ ATNNFS D IVSESGEKAPN+VYKGRLQ NRR IAVKKFTK AWPDPKQFA+E
Sbjct: 51 DLKTATNNFSPDNIVSESGEKAPNLVYKGRLQ----NRRSIAVKKFTKMAWPDPKQFAEE 106
Query: 121 AWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180
AWGVGK RHK+LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY
Sbjct: 107 AWGVGKFRHKKLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 166
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY 240
IAEALDYCSSEGRPLYHDLNAYRVLFDE+GDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY
Sbjct: 167 IAEALDYCSSEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEY 226
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300
LRNGRVTPESVI+SFGTVLLDLLSGKHIPPSH A+DMIRGKNI L
Sbjct: 227 LRNGRVTPESVIYSFGTVLLDLLSGKHIPPSH---------------AIDMIRGKNITLL 271
Query: 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 360
MDSHLEGNFS+EEATVV LAS+CLQYEPRERP+TKDLV+TLAPLQ +PDVPSYVMLGI
Sbjct: 272 MDSHLEGNFSTEEATVVVGLASQCLQYEPRERPSTKDLVTTLAPLQTKPDVPSYVMLGIS 331
Query: 361 RHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLE 420
+HEEAP TPQ PLSPMG+ACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLE
Sbjct: 332 KHEEAPATPQRPLSPMGEACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLE 391
Query: 421 ARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQ 480
+RKRGD AFR+K+FKTA+DCYSQFIDVGTMVSPTV+ARRSLC L+CDQPDAALRDAMQAQ
Sbjct: 392 SRKRGDFAFRDKDFKTAIDCYSQFIDVGTMVSPTVFARRSLCFLLCDQPDAALRDAMQAQ 451
Query: 481 CVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGRGS 527
CVYPDW TAFYMQ+VALAKLDMH DAADML EAA+LEEK+QR G+GS
Sbjct: 452 CVYPDWPTAFYMQSVALAKLDMHNDAADMLNEAAALEEKKQRGGKGS 498
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 527 | ||||||
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.789 | 0.812 | 0.853 | 9.1e-203 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.853 | 0.920 | 0.651 | 2.4e-163 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.850 | 0.914 | 0.647 | 8e-156 | |
| TAIR|locus:2827634 | 465 | SSP "SHORT SUSPENSOR" [Arabido | 0.504 | 0.572 | 0.517 | 2e-132 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.844 | 0.932 | 0.539 | 8.7e-127 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.844 | 0.891 | 0.525 | 8e-124 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.571 | 0.615 | 0.637 | 6.5e-106 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.559 | 0.605 | 0.643 | 3.6e-105 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.559 | 0.603 | 0.636 | 7.5e-105 | |
| TAIR|locus:2036426 | 507 | BSK11 "brassinosteroid-signali | 0.660 | 0.686 | 0.561 | 1.6e-104 |
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1962 (695.7 bits), Expect = 9.1e-203, P = 9.1e-203
Identities = 368/431 (85%), Positives = 395/431 (91%)
Query: 97 NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156
NRRWIAVKKFTK AWP+PKQFA+EAWGVGKLRH RLANLIGYCCDGDERLLVAE+MPNDT
Sbjct: 97 NRRWIAVKKFTKMAWPEPKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDT 156
Query: 157 LAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSC 216
LAKHLFHWENQTIEWAMRLRV YIAEALDYCS+EGRPLYHDLNAYRVLFDE+GDPRLSC
Sbjct: 157 LAKHLFHWENQTIEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSC 216
Query: 217 FGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVV 276
FGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESV +SFGTVLLDLLSGKHIPPSH
Sbjct: 217 FGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSH---- 272
Query: 277 WNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTK 336
ALDMIRGKNI+ LMDSHLEG FS+EEATVV +LAS+CLQYEPRERPNTK
Sbjct: 273 -----------ALDMIRGKNIILLMDSHLEGKFSTEEATVVVELASQCLQYEPRERPNTK 321
Query: 337 DLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTH 396
DLV+TLAPLQ + DVPSYVMLGI + EEAP TPQ PLSP+G+ACSRMDLTAIHQILVMTH
Sbjct: 322 DLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQRPLSPLGEACSRMDLTAIHQILVMTH 381
Query: 397 YKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVY 456
Y+DDEGTNELSFQEWTQQM+DML+ARKRGD +FREK+FKTA+DCYSQFIDVGTMVSPTV+
Sbjct: 382 YRDDEGTNELSFQEWTQQMKDMLDARKRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVF 441
Query: 457 ARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 516
RRSLC+L+CDQPDAALRDAMQAQCVYPDW TAFYMQ+VALAKL+M+ DAADML EAA L
Sbjct: 442 GRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQL 501
Query: 517 EEKRQRSGRGS 527
EEKRQR GRGS
Sbjct: 502 EEKRQRGGRGS 512
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1590 (564.8 bits), Expect = 2.4e-163, P = 2.4e-163
Identities = 307/471 (65%), Positives = 373/471 (79%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EFS LRAAT FS+D IVSE G KAPNVVYKGRL+D RWIAVK+F + AWPD
Sbjct: 37 FTEFSFDQLRAATCGFSTDSIVSEHGVKAPNVVYKGRLEDD----RWIAVKRFNRSAWPD 92
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF +EA VG+LR++RLANLIG+CC+GDERLLVAE+MP +TL+KHLFHW++Q ++W+M
Sbjct: 93 TRQFLEEAKAVGQLRNERLANLIGFCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSM 152
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRVALY+A+AL+YCSS+GR LYHDLNAYR+LFD++G+PRLSCFGLMKNSRDGKSYSTNL
Sbjct: 153 RLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 212
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
A+TPPEYLR GRV PESV++SFGT+LLDLLSGKHIPPSH ALD+IR
Sbjct: 213 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH---------------ALDLIR 257
Query: 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPS 353
GKN L LMDS L+G+FS+++ T + LASRCLQYE RERPN K LVS+LAPLQ D+PS
Sbjct: 258 GKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQKETDIPS 317
Query: 354 YVMLGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGT-NELSFQEWT 412
+V++GIP H A P L+P+GDACSR DLTAIH+IL YKDDEG NELSFQ WT
Sbjct: 318 HVLMGIP-HGAASPKETTSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANELSFQVWT 376
Query: 413 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAA 472
Q+++ L ++K+GD AF+ K+F TAV+CY+QFI+ GTMVSPTV+ARR LC+LM + P A
Sbjct: 377 DQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMSNMPQEA 436
Query: 473 LRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523
L DAMQAQ V P+W TAFY+QA AL L M KDA + LK+ SLE K+ +
Sbjct: 437 LGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKDGTSLEAKKHNN 487
|
|
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1519 (539.8 bits), Expect = 8.0e-156, P = 8.0e-156
Identities = 303/468 (64%), Positives = 355/468 (75%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EF L L++AT FSSD IVSE GEKAPNVVY+GRL DG R IAVK+F + AW D
Sbjct: 38 FKEFKLEQLKSATGGFSSDNIVSEHGEKAPNVVYRGRLDDG----RLIAVKRFNRLAWAD 93
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF DEA VG LR RLANLIG C +G+ERLLVAE+MP++TLAKHLFHWEN ++WAM
Sbjct: 94 HRQFLDEAKAVGSLRSDRLANLIGCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAM 153
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRVAL +A+AL+YCS++GR LYHDLNAYRVLFD++G+PRLSCFGLMKNSRDGKSYSTNL
Sbjct: 154 RLRVALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNL 213
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
A+TPPEYLR GRVTPESV+FSFGTVLLDL+SGKHIPPSH ALD+IR
Sbjct: 214 AFTPPEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPSH---------------ALDLIR 258
Query: 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPS 353
GKN LMDS LEG+FS+E+ T + LA+RCLQYE RERPN K LV++L LQ DV S
Sbjct: 259 GKNCAMLMDSALEGHFSNEDGTELVRLATRCLQYEARERPNVKSLVTSLVTLQKESDVAS 318
Query: 354 YVMLGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEG-TNELSFQEWT 412
YV++GIP EA L+P GDAC R+DLTAI +IL YKDDEG NELSFQ WT
Sbjct: 319 YVLMGIPHETEAEEESPLSLTPFGDACLRVDLTAIQEILSKIGYKDDEGIANELSFQMWT 378
Query: 413 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAA 472
QM++ L ++K+GD+AFR K+F TAVDCY+QFID GTMVSPTV+ARR L +LM D A
Sbjct: 379 NQMQESLNSKKQGDLAFRSKDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLMNDNAQEA 438
Query: 473 LRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520
L DA+QAQ V PDW TA Y+QA L KL M DA LK+ +LE K+
Sbjct: 439 LTDALQAQVVSPDWPTALYLQAACLFKLGMEADAQQALKDGTTLEAKK 486
|
|
| TAIR|locus:2827634 SSP "SHORT SUSPENSOR" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 736 (264.1 bits), Expect = 2.0e-132, Sum P(2) = 2.0e-132
Identities = 146/282 (51%), Positives = 201/282 (71%)
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298
+ + G V PE+VI+ FGTVL++LLSGK IPPSH A +MI KN+
Sbjct: 200 DQITTGSVNPENVIYRFGTVLVNLLSGKQIPPSH---------------APEMIHRKNVF 244
Query: 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLG 358
LMD +L+G FS +EA VV+ LAS+CL+YE +E PNTK++V+TL LQ R + PSY ++
Sbjct: 245 KLMDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVE 304
Query: 359 IPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDM 418
+ E+ + + LSP+G+AC RMDL +IH ILV+ Y DD+ ELSF+EW Q+++++
Sbjct: 305 MTNQEKDASSSSN-LSPLGEACLRMDLASIHSILVLAGYDDDKDIIELSFEEWIQEVKEL 363
Query: 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQ 478
+ R+ GD AF E++FKTA+ CYSQF++ ++V P+VYARRSL +L CD+P+ AL D M
Sbjct: 364 QDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMH 423
Query: 479 AQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520
AQ V+PDW TAFY+Q+VALAKLDM+ D+AD LKEAA LE K+
Sbjct: 424 AQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKEAALLEVKK 465
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
Identities = 253/469 (53%), Positives = 326/469 (69%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EFSL LR AT+ FS+D IVSE E+ PN+VYKG+L DG R IAVK+F + +WPD
Sbjct: 26 FLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDG----RKIAVKRFQRLSWPD 81
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+F +EA VG+ R + +ANLIG C +G ERLLVAEYMPN+TLAKHLFHWE + ++W M
Sbjct: 82 SLEFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHWEKRPMKWEM 141
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRVAL+ A AL+YC+ G LYHDLN YR+LFD+ G+PRLSCFGLMK SR+GKSYSTNL
Sbjct: 142 RLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSREGKSYSTNL 201
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
A+ PPEYLR G V PESV FSFGT+LLDL+SG+HIPP+H ALD+ R
Sbjct: 202 AFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNH---------------ALDLFR 246
Query: 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV-P 352
GKN L LMDS L+G FS E+ T + LASRCL+ EP ERP+ K L+S L+ L+ R ++ P
Sbjct: 247 GKNYLVLMDSALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWP 306
Query: 353 SYVMLGIPRHEEAPPTPQHPL--SPMGDACSRMDLTAIHQILVMTHYKDDEG--TNELSF 408
+ IP P + PL +P G+AC R+DL+ +H++L Y +D+ TNE SF
Sbjct: 307 NVKEENIPTPSYTEPATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSF 366
Query: 409 QEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ 468
Q WT QM++ ++ +K GD AFR K+F+TA++ Y++F+ +VSPTV ARR LC+LM D
Sbjct: 367 QMWTGQMQENMDYKKHGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDM 426
Query: 469 PDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
AL DAMQ Q P++S A Y+QA L KL M +A + L+ +SLE
Sbjct: 427 FREALSDAMQTQVASPEFSIALYLQAACLLKLGMEAEAKEALRHGSSLE 475
|
|
| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1217 (433.5 bits), Expect = 8.0e-124, P = 8.0e-124
Identities = 248/472 (52%), Positives = 321/472 (68%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EFSL LR AT+ FS+ IVSE + PN+VYKG+L DG RR IAVK+F + +WPD
Sbjct: 45 FREFSLEQLRIATDGFSAGNIVSEHNDSVPNIVYKGKLGDG---RR-IAVKRFQRLSWPD 100
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
P +F +EA VG+LR + +ANLIG CCD +ERLLVAEYMPN TLAKHLFHWE + ++W M
Sbjct: 101 PFEFINEAQAVGRLRSEHMANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEM 160
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RL+VAL+ A AL+YC+ +G LYHDLN YR++FD+ G P+LSCFGLMKNS +GK YSTNL
Sbjct: 161 RLKVALHTARALEYCNDKGIDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNL 220
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
A+ PPEYLR G V ESV FSFGT+LLDL+SG+HIPP+H ALD+ R
Sbjct: 221 AFAPPEYLRLGTVIAESVTFSFGTLLLDLMSGRHIPPNH---------------ALDLFR 265
Query: 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV-P 352
GKN L LMDS L+G FS E+ T + +ASRC + EP ERP+ K L +TL+ LQ R + P
Sbjct: 266 GKNYLVLMDSALDGQFSDEDRTELIHVASRCFKTEPEERPSIKFLKATLSRLQKRAKLCP 325
Query: 353 SYVM--LGIPR----HEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGT-NE 405
V + P + P T L+P GDACSR DL++IH++L Y++D G NE
Sbjct: 326 INVKRPMSPPSKNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNE 385
Query: 406 LSFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM 465
SFQ WT +M++ ++ +K GD AF K+F TA++ Y++F+ VSPTV ARR LC+LM
Sbjct: 386 FSFQMWTGEMQENMDYKKHGDAAFLAKDFDTAIEFYTEFMTGAPTVSPTVLARRCLCYLM 445
Query: 466 CDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
+ AL DAMQAQ P+W Y+QA L KL+M +A + L+ ++LE
Sbjct: 446 TEMFSEALSDAMQAQVASPEWPIPLYLQAACLFKLEMEAEAKEALRHGSALE 497
|
|
| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 204/320 (63%), Positives = 250/320 (78%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EF L +LR ATN FS IVSE GEKAPNVVY+G+L+ GN +A+K+F++ +WPD
Sbjct: 38 FKEFELNELRKATNGFSPSCIVSEGGEKAPNVVYRGKLE-GN---HLVAIKRFSRQSWPD 93
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF EA GVGKLR+KR+ +LIG C +GDERLLVAEYMPNDTL+KHLFHWE Q + W M
Sbjct: 94 AQQFVVEATGVGKLRNKRIVSLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDM 153
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
R+R+A YIAEALDYC+ E R +YHDLNAYR+LFDE GDPRLS FGLMKNSRDGKSYSTNL
Sbjct: 154 RVRIADYIAEALDYCNIENRKIYHDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNL 213
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
AYTPPE+LR GRV PESVIFS+GT+LLDLLSGKHIPPSH ALD+IR
Sbjct: 214 AYTPPEFLRTGRVIPESVIFSYGTILLDLLSGKHIPPSH---------------ALDIIR 258
Query: 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPS 353
GKN L LMDS LEG +++++AT + DLAS+CLQ E ++RP+TK L+S +APLQ + +V S
Sbjct: 259 GKNALLLMDSSLEGQYANDDATKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQKQEEVAS 318
Query: 354 YVMLGIPRHEEAPPTPQHPL 373
+V++G+P++ PT PL
Sbjct: 319 HVLMGLPKNTVILPTMLSPL 338
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 202/314 (64%), Positives = 249/314 (79%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F EFS+ LR AT+ F+++ IVSE GEKAPNVVYKG+L DN+R IAVK+F + AWPD
Sbjct: 41 FREFSIETLRNATSGFATENIVSEHGEKAPNVVYKGKL----DNQRRIAVKRFNRKAWPD 96
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF +EA VG+LR+ R+ANL+G C +G+ERLLVAE+MPN+TLAKHLFHWE+Q ++WAM
Sbjct: 97 SRQFLEEAKAVGQLRNYRMANLLGCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAM 156
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRVAL+IA+AL+YC+ +GR LYHDLNAYRVLFD++ +PRLSCFGLMKNSRDGKSYSTNL
Sbjct: 157 RLRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNL 216
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
A+TPPEYLR GRVTPESV++S+GT+LLDLLSGKHIPPSH ALD+IR
Sbjct: 217 AFTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSH---------------ALDLIR 261
Query: 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPS 353
+NI L+DS LEG FSS++ T + LASRCLQYEPRERPN K LV+ + PLQ + PS
Sbjct: 262 DRNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLETPS 321
Query: 354 YVMLGIPRHEEAPP 367
+ ++GIP P
Sbjct: 322 HQLMGIPSSASTTP 335
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
Identities = 200/314 (63%), Positives = 246/314 (78%)
Query: 54 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
F E++L L+AAT+ F+ ++IVSE GEKAPNVVYKG+L+ N++ IAVK+FT+ AWPD
Sbjct: 40 FREYTLEQLKAATSGFAVEYIVSEHGEKAPNVVYKGKLE----NQKKIAVKRFTRMAWPD 95
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
+QF +EA VG+LR +R+ANL+G CC+GDERLLVAE+MPN+TLAKHLFHWE Q ++W M
Sbjct: 96 SRQFLEEARSVGQLRSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTM 155
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
RLRV LY+A+AL+YC+S+GR LYHDLNAYRVLFDE +PRLS FGLMKNSRDGKSYSTNL
Sbjct: 156 RLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNL 215
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
A+TPPEYLR GR+TPESVI+SFGT+LLDLLSGKHIPPSH ALD+IR
Sbjct: 216 AFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSH---------------ALDLIR 260
Query: 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPS 353
+N+ L DS L+G FS + T + LASRCLQYE RERPNTK LV+ L PLQ +V S
Sbjct: 261 DRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLS 320
Query: 354 YVMLGIPRHEEAPP 367
+V++G+P P
Sbjct: 321 HVLMGLPHSGSVSP 334
|
|
| TAIR|locus:2036426 BSK11 "brassinosteroid-signaling kinase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 206/367 (56%), Positives = 250/367 (68%)
Query: 1 MGCCESTFLKGHLSVDTKXXXXXXXXXXXXPTQPSNGTEXXXXXXXXXXXXXX---FAEF 57
MGCC+S+FLK D K + N F+EF
Sbjct: 1 MGCCQSSFLKPSSLHDKKITSDDLSGRRGKGAKRGNRHRHANINEGRGWHFSDVPDFSEF 60
Query: 58 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQF 117
S + LR ATNNF+ + +VS ++ PN+VY+G ++ D +R IAVKKF+K WPDPKQF
Sbjct: 61 SASVLRDATNNFNKNAVVSVCSDQEPNLVYQGCIRSDKD-KRLIAVKKFSKTTWPDPKQF 119
Query: 118 ADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRV 177
A EA +G LRH RL NLIGYCC+GDERLLV+EYMPN++L KHLFHWE QT+EWAMRLRV
Sbjct: 120 ATEARAIGSLRHVRLVNLIGYCCEGDERLLVSEYMPNESLTKHLFHWEKQTMEWAMRLRV 179
Query: 178 ALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP 237
ALY+AEAL+YC G LYHDLN RVLFDENG PRLSCFG MKNS+DGK++STNLAYTP
Sbjct: 180 ALYVAEALEYCRQSGLKLYHDLNTCRVLFDENGSPRLSCFGWMKNSKDGKNFSTNLAYTP 239
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297
PEYLR+G + PESV+FSFGT LLDLLSGKHIPPSH A+ I+ +N+
Sbjct: 240 PEYLRSGTLIPESVVFSFGTFLLDLLSGKHIPPSH---------------AVGTIQKQNL 284
Query: 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVML 357
LMDSHLEGN+ E+A +VFDLAS+CL P ERP D++S + LQ + DVPSY ML
Sbjct: 285 NVLMDSHLEGNYPEEDAAMVFDLASKCLHNNPNERPEIGDIISVITTLQQKLDVPSYTML 344
Query: 358 GIPRHEE 364
GI + E+
Sbjct: 345 GISKLEK 351
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q944A7 | Y4523_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7890 | 0.9639 | 0.9921 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 527 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 7e-28 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 8e-23 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 2e-21 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-20 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-20 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 4e-18 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 6e-18 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-17 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 7e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-14 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 7e-13 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-12 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 2e-12 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 5e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 2e-11 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 6e-11 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 5e-10 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 1e-09 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-09 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-09 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-09 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-09 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 4e-09 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 4e-09 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 6e-09 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 6e-09 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 8e-09 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-08 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-08 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 1e-08 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 2e-08 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-08 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 2e-08 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 5e-08 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 7e-08 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 9e-08 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 9e-08 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-07 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 1e-07 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 2e-07 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 2e-07 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 2e-07 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 3e-07 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 4e-07 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 4e-07 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 5e-07 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 5e-07 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 6e-07 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 6e-07 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 7e-07 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 8e-07 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 9e-07 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 1e-06 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 1e-06 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 2e-06 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 2e-06 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 3e-06 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-06 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 6e-06 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 6e-06 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 7e-06 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 8e-06 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 8e-06 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 8e-06 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 9e-06 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 2e-05 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 2e-05 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 3e-05 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 3e-05 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 3e-05 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 4e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-05 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 5e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 6e-05 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 6e-05 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 7e-05 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 1e-04 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 1e-04 | |
| PLN03088 | 356 | PLN03088, PLN03088, SGT1, suppressor of G2 allele | 1e-04 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 1e-04 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-04 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 1e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-04 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 2e-04 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 2e-04 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 2e-04 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 3e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 3e-04 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-04 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 4e-04 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 5e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 5e-04 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 5e-04 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 5e-04 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 7e-04 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 7e-04 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 7e-04 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 0.001 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 0.001 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 0.001 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 0.001 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 0.001 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 0.001 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.001 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 0.002 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 0.002 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 0.002 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 0.002 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 0.002 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 0.002 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 0.003 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 0.003 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 0.003 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 0.003 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 0.004 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 0.004 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 0.004 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 7e-28
Identities = 65/266 (24%), Positives = 94/266 (35%), Gaps = 66/266 (24%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGD 143
VY R + + +A+K K + E + KL H + L G D +
Sbjct: 8 TVYLARDKKTG---KKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN 64
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
LV EY +L L E + LR+ L I E L+Y S G + H DL
Sbjct: 65 HLYLVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPE 121
Query: 203 RVLFDE-NGDPRLSCFGLMKNSRDGKSYST----NLAYTPPEYLRN-GRVTPESVIFSFG 256
+L D NG +L+ FGL K KS AY PE L G + +S I+S G
Sbjct: 122 NILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLG 181
Query: 257 TVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATV 316
+L +L D+IR
Sbjct: 182 VILYELPE-----------------------LKDLIR----------------------- 195
Query: 317 VFDLASRCLQYEPRERPNTKDLVSTL 342
+ LQ +P +RP+ K+++ L
Sbjct: 196 ------KMLQKDPEKRPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 8e-23
Identities = 72/265 (27%), Positives = 108/265 (40%), Gaps = 33/265 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKH--AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYK + + +AVK K + E + +L H + LI D
Sbjct: 14 TVYKAKHKGTGKI---VAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDK 70
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
D LV EY L +L + ++AL I L+Y S G + H DL
Sbjct: 71 DHLYLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHSNG--IIHRDLKP 126
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGR-VTPESVIFSFG 256
+L DENG +++ FGL K S T TP PE L G P+ ++S G
Sbjct: 127 ENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLG 186
Query: 257 TVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH--LMDSHLEGNFSSEEA 314
+L +LL+GK +++ L +IR IL L + + SEEA
Sbjct: 187 VILYELLTGKPPFSGENIL-----------DQLQLIR--RILGPPLEFDEPKWSSGSEEA 233
Query: 315 TVVFDLASRCLQYEPRERPNTKDLV 339
DL +CL +P +RP ++++
Sbjct: 234 K---DLIKKCLNKDPSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 93.4 bits (233), Expect = 2e-21
Identities = 72/271 (26%), Positives = 116/271 (42%), Gaps = 39/271 (14%)
Query: 85 VVYKGRL-QDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG L G+ +AVK + A ++F EA + KL H + L+G C +
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 143 DERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH- 197
+ ++V EYMP D L K+ + + + L AL IA ++Y S + H
Sbjct: 74 EPLMIVMEYMPGGDLLDYLRKN----RPKELSLSDLLSFALQIARGMEYLES--KNFIHR 127
Query: 198 DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVI 252
DL A L EN ++S FGL ++ D Y + PE L+ G+ T +S +
Sbjct: 128 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDV 187
Query: 253 FSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS 311
+SFG +L ++ + G+ P M N L+ ++ L +
Sbjct: 188 WSFGVLLWEIFTLGE--EPYPGMS---------NAEVLEYLKKGYRLPKPPN------CP 230
Query: 312 EEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
E ++ L +C +P +RP +LV L
Sbjct: 231 PE---LYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 90.7 bits (226), Expect = 2e-20
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 36/274 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VYKG+L+ + +AVK + A + K F EA + KL H + L+G C + +
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 144 ERLLVAEYMPNDTLAKHL-------FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
LV EYM L +L E T+ L A+ IA+ ++Y +S +
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS--KKFV 127
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPE 249
H DL A L E+ ++S FGL ++ D Y + + PE L++G T +
Sbjct: 128 HRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSK 187
Query: 250 SVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309
S ++SFG +L ++ + P + + N L+ +R L +
Sbjct: 188 SDVWSFGVLLWEIFTLGATP-------YPGLS---NEEVLEYLRKGYRLPKPE-----YC 232
Query: 310 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343
E +++L C Q +P +RP +LV L
Sbjct: 233 PDE----LYELMLSCWQLDPEDRPTFSELVERLE 262
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 3e-20
Identities = 70/272 (25%), Positives = 112/272 (41%), Gaps = 42/272 (15%)
Query: 85 VVYKGRLQDGNDN-RRWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYCC 140
VYKG+L+ + +AVK + A +Q F EA + KL H + L+G C
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDA--SEQQIEEFLREARIMRKLDHPNVVKLLGVCT 71
Query: 141 DGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
+ + +V EYM L K+ + + L AL IA ++Y S +
Sbjct: 72 EEEPLYIVMEYMEGGDLLSYLRKN-----RPKLSLSDLLSFALQIARGMEYLES--KNFI 124
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPES 250
H DL A L EN ++S FGL ++ D Y + PE L+ G+ T +S
Sbjct: 125 HRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKS 184
Query: 251 VIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310
++SFG +L ++ + P P N L+ ++ L +
Sbjct: 185 DVWSFGVLLWEIFTLGEQPY----------PGMSNEEVLEYLKNGYRLPQPPN------C 228
Query: 311 SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
E ++DL +C +P +RP +LV L
Sbjct: 229 PPE---LYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 83.7 bits (208), Expect = 4e-18
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 31/267 (11%)
Query: 85 VVYKGRL-QDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG L DG +AVK + A + ++ F +EA + KL H + L+G C G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
+ +V EYMP L L + + L++AL IA+ ++Y S + H DL A
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLES--KNFVHRDLAA 130
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYST------NLAYTPPEYLRNGRVTPESVIFSF 255
L EN ++S FGL ++ + Y + + PE L++G+ T +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 256 GTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEAT 315
G +L ++ + P P N L+++ L + N E
Sbjct: 191 GVLLWEIFTLGEQP----------YPGMSNEEVLELLEDGYRLPRPE-----NCPDE--- 232
Query: 316 VVFDLASRCLQYEPRERPNTKDLVSTL 342
+++L +C Y+P +RP +LV L
Sbjct: 233 -LYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 6e-18
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V G + + +AVK + + F EA + LRH L L+G G+
Sbjct: 22 VMLGDYRG-----QKVAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPL 75
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
+V EYM +L +L I A +L AL + E ++Y E + H DL A V
Sbjct: 76 YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYL--EEKNFVHRDLAARNV 133
Query: 205 LFDENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLL 263
L E+ ++S FGL K + G S + +T PE LR + + +S ++SFG +L ++
Sbjct: 134 LVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193
Query: 264 SGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEAT----VVFD 319
S +P + +P+K D++ H+E + E V+
Sbjct: 194 SFGRVP-------YPRIPLK------DVVP----------HVEKGYRMEAPEGCPPEVYK 230
Query: 320 LASRCLQYEPRERPNTKDLVSTLA 343
+ C + +P +RP K L LA
Sbjct: 231 VMKDCWELDPAKRPTFKQLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 81.8 bits (203), Expect = 2e-17
Identities = 61/265 (23%), Positives = 92/265 (34%), Gaps = 41/265 (15%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTK-HAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VY R D + +A+K K D ++ E + KL+H + L D D
Sbjct: 14 KVYLAR--DKKTGKL-VAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDED 70
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN-AY 202
+ LV EY L L + + A I AL+Y H +
Sbjct: 71 KLYLVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYL--------HSKGIVH 120
Query: 203 R------VLFDENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYLRNGRVTPESVIF 253
R +L DE+G +L+ FGL + G+ +T Y PE L I+
Sbjct: 121 RDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIW 180
Query: 254 SFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE 313
S G +L +LL+GK PP + I E + S E
Sbjct: 181 SLGVILYELLTGK--PPFPGDDQLLEL--------FKKIGKPKPPFPPP---EWDISPE- 226
Query: 314 ATVVFDLASRCLQYEPRERPNTKDL 338
DL + L +P +R ++
Sbjct: 227 ---AKDLIRKLLVKDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 73.2 bits (178), Expect = 7e-14
Identities = 63/286 (22%), Positives = 102/286 (35%), Gaps = 34/286 (11%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK---QFADEAWGVGKLRH- 129
I+ + GE + VY R +R+ +A+K K K +F E + L H
Sbjct: 4 ILRKLGEGSFGEVYLAR------DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHP 57
Query: 130 KRLANLIGYCCDGDERLLVAEYMPNDTLAKHL-FHWENQTIEWAMRLRVALYIAEALDYC 188
+ L + D LV EY+ +L L + + L + I AL+Y
Sbjct: 58 PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL 117
Query: 189 SSEGRPLYHDLNAYRVLFDENGDPRLSC-FGLMKNSRDGKSYSTN----------LAYTP 237
S+G ++ D+ +L D +G FGL K D S S+ Y
Sbjct: 118 HSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA 176
Query: 238 PEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294
PE L + S I+S G L +LL+G L +I
Sbjct: 177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEK-------NSSATSQTLKIIL- 228
Query: 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVS 340
+ + S L + + DL + L +P+ R ++ +S
Sbjct: 229 ELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274
|
Length = 384 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 7e-14
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 47/258 (18%)
Query: 103 VKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF 162
VK+ + AD +GKL+H + LIG C L+ EY+ L++ L
Sbjct: 720 VKEINDVNSIPSSEIAD----MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL- 774
Query: 163 HWENQTIEWAMRLRVALYIAEALDY--CSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL- 219
+ + W R ++A+ IA+AL + C + +L+ +++ D +P L L
Sbjct: 775 ----RNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLP 829
Query: 220 ----MKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPS---- 271
S AY PE +T +S I+ FG +L++LL+GK P+
Sbjct: 830 GLLCTDTKCFISS-----AYVAPETRETKDITEKSDIYGFGLILIELLTGKS--PADAEF 882
Query: 272 --HDMVV-WNTVPIKFNFG--ALDMIRGKNILHLMDSHLEGNFSSEEATVV--FDLASRC 324
H +V W ++ + LDM +D + G+ S + +V +LA C
Sbjct: 883 GVHGSIVEWA----RYCYSDCHLDM--------WIDPSIRGDVSVNQNEIVEVMNLALHC 930
Query: 325 LQYEPRERPNTKDLVSTL 342
+P RP D++ TL
Sbjct: 931 TATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 7e-13
Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 40/276 (14%)
Query: 86 VYKGRLQDGNDNRR-WIAVKKFTKHAWPDPKQ--FADEAWGVGKLRHKRLANLIGYCCDG 142
V R DN +AVK H+ + + F E + L H+ + G C+
Sbjct: 20 VELCRYDPLGDNTGEQVAVKSL-NHSGEEQHRSDFEREIEILRTLDHENIVKYKG-VCEK 77
Query: 143 DER---LLVAEYMPNDTLAKHL-FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHD 198
L+ EY+P+ +L +L H + I L + I + +DY S+ R ++ D
Sbjct: 78 PGGRSLRLIMEYLPSGSLRDYLQRHRDQ--INLKRLLLFSSQICKGMDYLGSQ-RYIHRD 134
Query: 199 LNAYRVLFDENGDPRLSCFGLMK--NSRDGKSYSTNLAYTP-----PEYLRNGRVTPESV 251
L A +L + ++S FGL K Y +P PE LR + + S
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194
Query: 252 IFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS- 310
++SFG L +L + + PS P + + +G+ I+ + L+
Sbjct: 195 VWSFGVTLYELFT--YGDPSQ-------SPPAEFLRMIGIAQGQMIVTRLLELLKEGERL 245
Query: 311 -------SEEATVVFDLASRCLQYEPRERPNTKDLV 339
E V+DL C + EP++RP+ DL+
Sbjct: 246 PRPPSCPDE----VYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 2e-12
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 46/238 (19%)
Query: 56 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRL--QDGNDNRRWIAVKKFTKHAWPD 113
E L+ +R + E GE A VYKG L + + +A+K ++A P
Sbjct: 1 EIPLSAVR----------FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPK 50
Query: 114 PKQ-FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHL----------F 162
+Q F EA + L+H + L+G C ++ EY+ + L + L
Sbjct: 51 VQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGA 110
Query: 163 HWENQTIEWAMR----LRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCF 217
++T++ ++ L +A+ IA ++Y SS H DL A L E ++S F
Sbjct: 111 ESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS--HHFVHRDLAARNCLVGEGLTVKISDF 168
Query: 218 GLMKNSRDGKSYSTN-----------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS 264
GL SRD YS + + + PPE + G+ T ES I+SFG VL ++ S
Sbjct: 169 GL---SRDI--YSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 2e-12
Identities = 58/197 (29%), Positives = 85/197 (43%), Gaps = 25/197 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGDE 144
VYKG L+ + +AVK PD K+ F EA + + H + LIG C
Sbjct: 11 VYKGVLKGNTE----VAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQP 66
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS----EGRPLYH-DL 199
+V E +P +L L +N RL V + +LD + E + H DL
Sbjct: 67 IYIVMELVPGGSLLTFLRKKKN-------RLTVKKLLQMSLDAAAGMEYLESKNCIHRDL 119
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVI 252
A L EN ++S FG M +G Y+ + + +T PE L GR T ES +
Sbjct: 120 AARNCLVGENNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDV 178
Query: 253 FSFGTVLLDLLSGKHIP 269
+S+G +L + S P
Sbjct: 179 WSYGILLWETFSLGDTP 195
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 5e-12
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 32/233 (13%)
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
F +E + KL HK L L+G + +V E M L L + L+
Sbjct: 46 FLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQ 104
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYSTNLAY 235
+L +AE ++Y S+ + ++ DL A +L E+G ++S FGL + S + + +
Sbjct: 105 FSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKW 163
Query: 236 TPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294
T PE L++ + + +S ++S+G +L ++ S G+ P
Sbjct: 164 TAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYP------------------------ 199
Query: 295 KNILHLMDSHLEGNFSSEE----ATVVFDLASRCLQYEPRERPNTKDLVSTLA 343
K L + +E + E V+ L + C + EP++RP+ L L
Sbjct: 200 KMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 2e-11
Identities = 67/264 (25%), Positives = 112/264 (42%), Gaps = 29/264 (10%)
Query: 81 KAPNVVYKGRLQD---GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIG 137
K + KG D G+ +AVK A + F EA + +LRH L L+G
Sbjct: 9 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 138 YCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
+ L +V EYM +L +L + L+ +L + EA++Y E
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EANNFV 124
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-NLAYTPPEYLRNGRVTPESVIFS 254
H DL A VL E+ ++S FGL K + + + +T PE LR + + +S ++S
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 184
Query: 255 FGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEA 314
FG +L ++ S +P + +P+K D++ + MD+
Sbjct: 185 FGILLWEIYSFGRVP-------YPRIPLK------DVVPRVEKGYKMDA------PDGCP 225
Query: 315 TVVFDLASRCLQYEPRERPNTKDL 338
VV+D+ +C + RP+ L
Sbjct: 226 PVVYDVMKQCWHLDAATRPSFLQL 249
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 6e-11
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+AVK K DPK F EA + KLRH +L L C + +V E M +L ++
Sbjct: 33 VAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEY 91
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
L + ++ + +A +A + Y ++ ++ DL A VL EN +++ FGL
Sbjct: 92 LQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY-IHRDLAARNVLVGENNICKVADFGLA 150
Query: 221 K-------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP 269
+ +R+G + + +T PE R + +S ++SFG +L ++++ +P
Sbjct: 151 RVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 5e-10
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 74 IVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHK 130
+ E GE A V+ G +++ +AVK + A D ++ F EA + +H+
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 131 RLANLIGYCCDGDERLLVAEYMPNDTLAKHL-FHWENQTIEWAMR-----------LRVA 178
+ G C +GD ++V EYM + L K L H + + L++A
Sbjct: 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128
Query: 179 LYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------ 232
+ IA + Y +S+ ++ DL L + ++ FG+ SRD Y+T+
Sbjct: 129 VQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVGG 182
Query: 233 -----LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GK 266
+ + PPE + + T ES ++SFG VL ++ + GK
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 1e-09
Identities = 59/282 (20%), Positives = 109/282 (38%), Gaps = 38/282 (13%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVK--KFTKHAWPDPKQFADEAWGVGKLRHKRLANLI 136
GE V +G+L + ++ +AVK K H + + ++F EA + H + LI
Sbjct: 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67
Query: 137 GYCCDGDER------LLVAEYMPNDTLAKHLFHWE----NQTIEWAMRLRVALYIAEALD 186
G C + +++ +M + L L + + + L+ + IA ++
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 187 YCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP------EY 240
Y S+ ++ DL A + E+ ++ FGL K G Y P E
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300
L + T +S +++FG + ++ + P P N D +R N L
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTP----------YPGVENHEIYDYLRHGNRLKQ 236
Query: 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
+ L+ ++DL C + +P++RP L L
Sbjct: 237 PEDCLDE---------LYDLMYSCWRADPKDRPTFTKLREVL 269
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 1e-09
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 34/267 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD---EAWGVGKLRHKRLANLIGYCCDG 142
V +GRL+ +A+K T A KQ D EA +G+ H + L G
Sbjct: 20 VCRGRLKLPGKKEIDVAIK--TLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS 77
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202
+++ EYM N +L K L + + + + IA + Y S ++ DL A
Sbjct: 78 RPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLSEMNY-VHRDLAAR 135
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKS-YSTN-----LAYTPPEYLRNGRVTPESVIFSFG 256
+L + N ++S FGL + D ++ Y+T + +T PE + + T S ++SFG
Sbjct: 136 NILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFG 195
Query: 257 TVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEAT 315
V+ +++S G+ P DM N IK A++ G + MD +
Sbjct: 196 IVMWEVMSYGER--PYWDMS--NQDVIK----AVE--DGYRLPPPMDC----------PS 235
Query: 316 VVFDLASRCLQYEPRERPNTKDLVSTL 342
++ L C Q + ERP +VSTL
Sbjct: 236 ALYQLMLDCWQKDRNERPTFSQIVSTL 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 1e-09
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V++G + NR +A+K + F E + +LRHK L +L C G+
Sbjct: 22 VWEGLWK----NRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPV 77
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVL 205
++ E M +L L E Q + A + +A +AE + Y + ++ DL A +L
Sbjct: 78 YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNIL 136
Query: 206 FDENGDPRLSCFGLMKNSRDG--KSYSTNLAY--TPPEYLRNGRVTPESVIFSFGTVLLD 261
E+ +++ FGL + ++ S + Y T PE +G + +S ++SFG +L +
Sbjct: 137 VGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYE 196
Query: 262 LLSGKHIP 269
+ + +P
Sbjct: 197 MFTYGQVP 204
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 61/256 (23%), Positives = 103/256 (40%), Gaps = 31/256 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+ GRL+ N +AVK + PD K +F EA + + H + LIG C
Sbjct: 11 VFSGRLRADNTP---VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 67
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+V E + L E ++ +++ A ++Y S+ ++ DL A
Sbjct: 68 IYIVMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNC 125
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSFGTV 258
L E ++S FG+ + DG ST + +T PE L GR + ES ++SFG +
Sbjct: 126 LVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGIL 185
Query: 259 LLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF 318
L + S +P + L + + + + V+
Sbjct: 186 LWEAFSLGAVP----------------YANLSNQQTREAIEQGVRLPCPELCPDA---VY 226
Query: 319 DLASRCLQYEPRERPN 334
L RC +Y+P +RP+
Sbjct: 227 RLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+AVK K P+ F EA + KLRH +L L C + + +V EYM +L
Sbjct: 33 VAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDF 91
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL 219
L E + + + +A IAE + Y E R H DL A +L EN +++ FGL
Sbjct: 92 LKSGEGKKLRLPQLVDMAAQIAEGMAYL--ESRNYIHRDLAARNILVGENLVCKIADFGL 149
Query: 220 MK-------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP 269
+ +R+G + + +T PE GR T +S ++SFG +L ++++ +P
Sbjct: 150 ARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 4e-09
Identities = 66/265 (24%), Positives = 109/265 (41%), Gaps = 33/265 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+KG L+D + +AVK + + K +F EA + + H + LIG C
Sbjct: 11 VFKGTLKD----KTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQP 66
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+V E +P L + ++ ++ AL A + Y S+ ++ DL A
Sbjct: 67 IYIVMELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNC 124
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVL 259
L EN ++S FG+ + DG S+ L +T PE L GR + ES ++S+G +L
Sbjct: 125 LVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILL 184
Query: 260 LDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI-RGKNILHLMDSHLEGNFSSEEATVVF 318
+ S P P N A + + +G + + + V+
Sbjct: 185 WETFSLGVCP----------YPGMTNQQAREQVEKGYRM----------SCPQKCPDDVY 224
Query: 319 DLASRCLQYEPRERPNTKDLVSTLA 343
+ RC Y+P RP +L LA
Sbjct: 225 KVMQRCWDYKPENRPKFSELQKELA 249
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 4e-09
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLAN 134
V E G +V+ G +R +A+K + A + + F +EA + KL H +L
Sbjct: 9 VQEIGSGQFGLVWLGYWL----EKRKVAIKTIREGAMSE-EDFIEEAQVMMKLSHPKLVQ 63
Query: 135 LIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
L G C + LV E+M + L+ +L + + + L + L + E + Y
Sbjct: 64 LYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETL-LGMCLDVCEGMAYL-ESSNV 121
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNGRVTPE 249
++ DL A L EN ++S FG+ + D + S+ + ++ PE + + +
Sbjct: 122 IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSK 181
Query: 250 SVIFSFGTVLLDLLSGKHIP 269
S ++SFG ++ ++ S P
Sbjct: 182 SDVWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 6e-09
Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 27/247 (10%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+A+K + A + + F +EA + KL H +L L G C +V E+M N L +
Sbjct: 31 VAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNY 89
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
L + + + M L + + E ++Y ++ DL A L G ++S FG+
Sbjct: 90 LRQRQGK-LSKDMLLSMCQDVCEGMEYLERNSF-IHRDLAARNCLVSSTGVVKVSDFGMT 147
Query: 221 KNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMV 275
+ D + S++ A ++PPE + + +S ++SFG ++ ++ + +P
Sbjct: 148 RYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEK--- 204
Query: 276 VWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT 335
K N+ ++MI L L V+++ C +P RP
Sbjct: 205 -------KSNYEVVEMISRGF--RLYRPKLASM-------TVYEVMYSCWHEKPEGRPTF 248
Query: 336 KDLVSTL 342
+L+ +
Sbjct: 249 AELLRAI 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 6e-09
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 30/234 (12%)
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIE-WAMRL 175
F +EA + KL H L L G C +V EYM N L +L E + L
Sbjct: 46 FIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYL--RERKGKLGTEWLL 103
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--- 232
+ + EA++Y S G ++ DL A L E+ ++S FGL + D + S+
Sbjct: 104 DMCSDVCEAMEYLESNGF-IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTK 162
Query: 233 --LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALD 290
+ + PPE R + +S ++SFG ++ ++ S +P N ++
Sbjct: 163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMP----------YERFSNSEVVE 212
Query: 291 MI-RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343
+ G L L T V+ + C +P +RP K L+S L
Sbjct: 213 SVSAG---YRLYRPKL-------APTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 8e-09
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 34/229 (14%)
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWA 172
P+ F EA + KLRH++L L Y +E + +V EYM +L L + +
Sbjct: 45 PEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 102
Query: 173 MRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-------NSRD 225
+ +A IA + Y ++ DL A +L EN +++ FGL + +R
Sbjct: 103 QLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 161
Query: 226 GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN 285
G + + +T PE GR T +S ++SFG +L +L + +P P N
Sbjct: 162 GAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVN 209
Query: 286 FGALDMI-RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 333
LD + RG + E + DL +C + EP ERP
Sbjct: 210 REVLDQVERGYRM----------PCPPECPESLHDLMCQCWRKEPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 126 KLRHKRLANLIGY-CC--DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIA 182
K +H N++ Y DE +V E+ +L K L NQT+ + V +
Sbjct: 53 KCKHP---NIVKYYGSYLKKDELWIVMEFCSGGSL-KDLLKSTNQTLTESQIAYVCKELL 108
Query: 183 EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTNLAYTPPE 239
+ L+Y S G ++ D+ A +L +G+ +L FGL + +++ + + PE
Sbjct: 109 KGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPE 167
Query: 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299
+ ++ I+S G ++L GK PP ++ P+K AL I
Sbjct: 168 VINGKPYDYKADIWSLGITAIELAEGK--PPYSELP-----PMK----ALFKIATNGPPG 216
Query: 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
L S+E D +CLQ P +RP + L
Sbjct: 217 L----RNPEKWSDEFK---DFLKKCLQKNPEKRPTAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 1e-08
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 38/249 (15%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+AVK + ++F EA + +++H L L+G C ++ E+M L +
Sbjct: 34 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL 219
L Q + + L +A I+ A++Y E + H DL A L EN +++ FGL
Sbjct: 93 LRECNRQEVNAVVLLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGL 150
Query: 220 MKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHD 273
+ G +Y+ + + +T PE L + + +S +++FG +L ++ + P
Sbjct: 151 SRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP---- 205
Query: 274 MVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE----ATVVFDLASRCLQYEP 329
+ +D+ + L LE + E V++L C Q+ P
Sbjct: 206 ------------YPGIDL---SQVYEL----LEKGYRMERPEGCPPKVYELMRACWQWNP 246
Query: 330 RERPNTKDL 338
+RP+ ++
Sbjct: 247 SDRPSFAEI 255
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 1e-08
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 26/232 (11%)
Query: 116 QFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL 175
+F +EA + KL H++L L G C +V EYM N L +L + + + L
Sbjct: 45 EFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYL-REHGKRFQPSQLL 103
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---- 231
+ + E + Y S+ + ++ DL A L D+ G ++S FGL + D + S+
Sbjct: 104 EMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSK 162
Query: 232 -NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALD 290
+ ++PPE L + + +S +++FG ++ ++ S +P ++ + K + G
Sbjct: 163 FPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMP--YERFNNSETVEKVSQG--- 217
Query: 291 MIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
L L HL +SE+ V+ + C + ERP + L+S++
Sbjct: 218 -------LRLYRPHL----ASEK---VYAIMYSCWHEKAEERPTFQQLLSSI 255
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 55.2 bits (134), Expect = 2e-08
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 48/221 (21%)
Query: 126 KLRHKRLANLIGYCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE- 183
++ H + L Y +E+L LV EY P L HL + E A Y AE
Sbjct: 49 RINHPFIVKLH-YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERA-----RFYAAEI 102
Query: 184 --ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP---- 237
AL+Y S G +Y DL +L D +G +L+ FGL K S + TP
Sbjct: 103 VLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLA 161
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297
PE L +S G +L ++L+GK PP F ++
Sbjct: 162 PEVLLGKGYGKAVDWWSLGVLLYEMLTGK--PP-------------F--------YAEDR 198
Query: 298 LHLMDSHLEG------NFSSEEATVVFDLASRCLQYEPRER 332
+ + L+ S E DL S LQ +P +R
Sbjct: 199 KEIYEKILKDPLRFPEFLSPEAR----DLISGLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 44/268 (16%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VVYKG + D ++A+K+ + K E + L+H + IG
Sbjct: 15 VVYKGLNLETGD---FVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS 71
Query: 143 DERLLVAEYMPNDTLAKHL--FHWENQTIEWAMRLRVALYIA---EALDYCSSEGRPLYH 197
D ++ EY N +L + + F +++ VA+Y+ + L Y +G + H
Sbjct: 72 DSLYIILEYAENGSLRQIIKKFGPFPESL-------VAVYVYQVLQGLAYLHEQG--VIH 122
Query: 198 -DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVI 252
D+ A +L ++G +L+ FG+ D ++ TP PE + + S I
Sbjct: 123 RDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDI 182
Query: 253 FSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSE 312
+S G +++LL+G PP +D+ N + F D L S E
Sbjct: 183 WSLGCTVIELLTGN--PPYYDL---NPMAALFRIVQDDHPP-----------LPEGISPE 226
Query: 313 EATVVFDLASRCLQYEPRERPNTKDLVS 340
+ D +C Q +P RP K L+
Sbjct: 227 ----LKDFLMQCFQKDPNLRPTAKQLLK 250
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 60/270 (22%), Positives = 105/270 (38%), Gaps = 40/270 (14%)
Query: 96 DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155
++ +AVK K F EA + L+H+ + G C DGD ++V EYM +
Sbjct: 33 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 92
Query: 156 TLAKHLF--------------HWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
L K L + + L +A IA + Y +S+ ++ DL
Sbjct: 93 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLAT 151
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSF 255
L N ++ FG+ ++ Y + + PPE + + T ES ++SF
Sbjct: 152 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211
Query: 256 GTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEAT 315
G +L ++ + P W F ++I +++ +E
Sbjct: 212 GVILWEIFTYGKQP-------W------FQLSNTEVIECITQGRVLE---RPRVCPKE-- 253
Query: 316 VVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
V+D+ C Q EP++R N K++ L L
Sbjct: 254 -VYDIMLGCWQREPQQRLNIKEIYKILHAL 282
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 5e-08
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRL 175
F + A + +L HK L G C GDE ++V EY+ +L +L +N I W +L
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103
Query: 176 RVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--- 231
VA +A AL + E + L H ++ A VL D + +K S G S +
Sbjct: 104 EVAKQLAWALHFL--EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161
Query: 232 -----NLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN 285
+ + PPE + N + ++ + +SFGT L ++ SG P S
Sbjct: 162 EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-------------- 207
Query: 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
ALD K + D H + + T + +L ++C+ YEP RP+ + ++ L
Sbjct: 208 --ALD--SQKKLQFYEDRH---QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 53.3 bits (129), Expect = 7e-08
Identities = 51/230 (22%), Positives = 83/230 (36%), Gaps = 47/230 (20%)
Query: 126 KLRHKRLANLIGYCCD--GDERLLVAEYMPNDTLAKHL-----FHWENQTIEWAMRLRVA 178
L+H + G D + + EY+ +L+ L E +
Sbjct: 55 SLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLP-EPV---------IR 104
Query: 179 LY---IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMK------NSRDGKS 228
Y I E L Y S G + H D+ +L D +G +L+ FG K S
Sbjct: 105 KYTRQILEGLAYLHSNG--IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGS 162
Query: 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGA 288
+ PE +R + I+S G ++++ +GK W+ + A
Sbjct: 163 VRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP--------PWS--ELGNPMAA 212
Query: 289 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
L I + HL SEEA D +CL+ +P++RP +L
Sbjct: 213 LYKIGSSGEPPEIPEHL-----SEEA---KDFLRKCLRRDPKKRPTADEL 254
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 9e-08
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWA 172
P+ F EA + KLRH +L L Y +E + +V E+M +L L + + ++
Sbjct: 45 PEAFLQEAQIMKKLRHDKLVPL--YAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLP 102
Query: 173 MRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-------NSRD 225
+ +A IA+ + Y ++ DL A +L +N +++ FGL + +R
Sbjct: 103 QLVDMAAQIADGMAYIERMNY-IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ 161
Query: 226 GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP 269
G + + +T PE GR T +S ++SFG +L +L++ +P
Sbjct: 162 GAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 9e-08
Identities = 18/97 (18%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 423 KRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV 482
G++ ++ ++ A++ Y + +++ + Y + + + + AL D +A +
Sbjct: 5 NLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALEL 63
Query: 483 YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519
PD + A+Y +A KL +++A + ++A L+
Sbjct: 64 DPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 60/215 (27%), Positives = 83/215 (38%), Gaps = 41/215 (19%)
Query: 138 YCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGR 193
Y G + L LV EY+P LA L + + + A +YIAE AL+Y S G
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVA-----RIYIAEIVLALEYLHSNG- 113
Query: 194 PLYHDLNAYRVLFDENG-----DPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYL 241
++ DL +L D NG D LS GL++ + Y PE +
Sbjct: 114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVI 173
Query: 242 RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301
+ +S G +L + L G IPP H T F NIL+
Sbjct: 174 LGQGHSKTVDWWSLGCILYEFLVG--IPPFHG----ETPEEIFQ----------NILNGK 217
Query: 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTK 336
E S+EA DL S+ L +P +R K
Sbjct: 218 IEWPEDVEVSDEA---IDLISKLLVPDPEKRLGAK 249
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 37/274 (13%)
Query: 86 VYKG--RLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VY+G R +DG+ +AVK + D F EA + K H+ + LIG +
Sbjct: 22 VYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81
Query: 143 DERLLVAEYMPNDTLAKHLFHWEN---QTIEWAMR--LRVALYIAEALDYCSSEGRPLYH 197
R ++ E M L L + M+ L A +A+ Y E ++
Sbjct: 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL-EENHFIHR 140
Query: 198 DLNAYRVLFDENGDPR---LSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTP 248
D+ A L G R ++ FG+ ++ Y + + PPE +G T
Sbjct: 141 DIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTS 200
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308
++ ++SFG +L ++ S ++P P + N ++ + G L +
Sbjct: 201 KTDVWSFGVLLWEIFSLGYMP----------YPGRTNQEVMEFVTGGGRL---------D 241
Query: 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
V+ + + C Q+ P +RPN ++ +
Sbjct: 242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERI 275
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 2e-07
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 117 FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
F EA +G+ H + L G G+ ++V EYM N L L E Q + A +L
Sbjct: 53 FLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQLM 110
Query: 177 VALY-IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--- 232
L +A + Y S G ++ L A++VL + + ++S F ++ + Y+T
Sbjct: 111 GMLPGLASGMKYLSEMGY-VHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGK 169
Query: 233 --LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS 264
+ + PE ++ + S ++SFG V+ +++S
Sbjct: 170 SPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 59/270 (21%), Positives = 100/270 (37%), Gaps = 42/270 (15%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY+G + + +AVK P ++ F EA+ + + H + LIG + +
Sbjct: 22 VYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY---IAEALDYCSSEGRPLYHDLNA 201
+V E P L +L + LY ++ AL Y S+ R ++ D+ A
Sbjct: 81 VWIVMELAPLGELRSYL----QVNKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAA 135
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP-----PEYLRNGRVTPESVIFSFG 256
VL +L FGL + D Y + P PE + R T S ++ FG
Sbjct: 136 RNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 195
Query: 257 TVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE-GN---FSSE 312
+ ++L P + V D+I +E G
Sbjct: 196 VCMWEILMLGVKP-------FQGVKNN------DVI----------GRIENGERLPMPPN 232
Query: 313 EATVVFDLASRCLQYEPRERPNTKDLVSTL 342
++ L ++C Y+P +RP +L + L
Sbjct: 233 CPPTLYSLMTKCWAYDPSKRPRFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 43/287 (14%)
Query: 75 VSESGEKAPNVVYKGRLQ-DGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKLRHKRL 132
+ E GE A +YKG L G D+ + +A+K P +F EA + +L H +
Sbjct: 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNI 69
Query: 133 ANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW-----------ENQTIEWAMR----LRV 177
L+G ++ EY+ L + L E+ T++ ++ L +
Sbjct: 70 VCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHI 129
Query: 178 ALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN----- 232
A+ IA ++Y SS ++ DL A +L E ++S GL + Y
Sbjct: 130 AIQIAAGMEYLSSHFF-VHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLL 188
Query: 233 -LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDM 291
+ + PPE + G+ + +S I+SFG VL ++ S + P + N ++M
Sbjct: 189 PIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFG-LQPYYGFS---------NQEVIEM 238
Query: 292 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+R + +L S + ++ L + C Q P RP KD+
Sbjct: 239 VRKRQLLPC---------SEDCPPRMYSLMTECWQEGPSRRPRFKDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL-LVAEYMPNDTLAK 159
+AVK K P+ F +EA + KLRH +L L Y +E + +V EYM +L
Sbjct: 33 VAVKTL-KPGTMSPESFLEEAQIMKKLRHDKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 89
Query: 160 HLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219
L E + ++ + +A +A + Y ++ DL + +L + +++ FGL
Sbjct: 90 FLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY-IHRDLRSANILVGDGLVCKIADFGL 148
Query: 220 MK-------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP 269
+ +R G + + +T PE GR T +S ++SFG +L +L++ +P
Sbjct: 149 ARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 203
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 4e-07
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP--- 237
I + LDY SE R ++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 238 -PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296
PE ++ ++ I+S G ++L G+ PP+ D+ P++
Sbjct: 169 APEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDL-----HPMR------------- 208
Query: 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 339
+L L+ + + + + CL +PR RP K+L+
Sbjct: 209 VLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 4e-07
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 26/187 (13%)
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP--- 237
I + LDY SE + ++ D+ A VL E+G+ +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 238 -PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296
PE ++ ++ I+S G ++L G+ PP ++ P+K F +I N
Sbjct: 169 APEVIKQSAYDSKADIWSLGITAIELAKGE--PPHSEL-----HPMKVLF----LIPKNN 217
Query: 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVM 356
LEGN+S + + CL EP RP K+L+ ++ SY+
Sbjct: 218 -----PPTLEGNYSKP----LKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKKT-SYLT 267
Query: 357 LGIPRHE 363
I R++
Sbjct: 268 ELIDRYK 274
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 5e-07
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 96 DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155
+ +A+K K P+ F EA + +L+H RL L + ++ EYM N
Sbjct: 28 NGHTKVAIKSL-KQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ-EPIYIITEYMENG 85
Query: 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215
+L L E + + +A IAE + + + ++ DL A +L E +++
Sbjct: 86 SLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY-IHRDLRAANILVSETLCCKIA 144
Query: 216 CFGLMK-------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHI 268
FGL + +R+G + + +T PE + G T +S ++SFG +L ++++ I
Sbjct: 145 DFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRI 202
Query: 269 P 269
P
Sbjct: 203 P 203
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 63/267 (23%), Positives = 108/267 (40%), Gaps = 33/267 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTK-HAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V KG + +AVK + H K+F EA + +L H + LIG C G+
Sbjct: 11 VVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIG-VCKGEP 69
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+LV E P L K+L + + I + +A +A + Y S+ ++ DL A V
Sbjct: 70 LMLVMELAPLGPLLKYLK--KRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNV 126
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSFGT 257
L ++S FG+ + G Y L + PE + G+ + +S ++S+G
Sbjct: 127 LLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGV 186
Query: 258 VLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATV 316
L + S G P +M +G ++ +++S E
Sbjct: 187 TLWEAFSYGA--KPYGEM------------------KGAEVIAMLESGERLPRPEECPQE 226
Query: 317 VFDLASRCLQYEPRERPNTKDLVSTLA 343
++ + C +Y P +RP +L ST
Sbjct: 227 IYSIMLSCWKYRPEDRPTFSELESTFR 253
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 6e-07
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 40/234 (17%)
Query: 127 LRHKRLANLIGYCCDGDER--LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEA 184
L H+ + G C + L+ E++P+ +L ++L +N+ I +L+ A+ I +
Sbjct: 63 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNK-INLKQQLKYAVQICKG 121
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-------NLAYTP 237
+DY S + ++ DL A VL + ++ FGL K K Y T + +
Sbjct: 122 MDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYA 180
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSG------------KHIPPSHDMVVWNTVPIKFN 285
PE L + S ++SFG L +LL+ K I P+H
Sbjct: 181 PECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTH------------- 227
Query: 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 339
G + + R +L EE V+ L +C +++P +R ++L+
Sbjct: 228 -GQMTVTRLVRVLEEGKRLPRPPNCPEE---VYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 6e-07
Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 30/183 (16%)
Query: 165 ENQTIEWAMRLRVALYIAEALDYC----SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
E + IE R+ + AL C L+ DL + D N + +L FGL
Sbjct: 98 ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157
Query: 221 KNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVV 276
K S++ TP PE L + +S I+S G ++ +L + PP
Sbjct: 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFT---- 211
Query: 277 WNTVPIKFNFGAL-DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT 335
N L I+ + +SSE + ++ L +P +RP+T
Sbjct: 212 ------ARNQLQLASKIKEGKF-----RRIPYRYSSE----LNEVIKSMLNVDPDKRPST 256
Query: 336 KDL 338
++L
Sbjct: 257 EEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 7e-07
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 46/270 (17%)
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHL---------FHWE-----NQTIEWAM 173
+HK + NL+G C ++ EY L ++L + ++ + + +
Sbjct: 76 KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKD 135
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY--ST 231
+ A +A ++Y +S+ + ++ DL A VL E+ +++ FGL ++ + Y +T
Sbjct: 136 LVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTT 194
Query: 232 N----LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG 287
N + + PE L + T +S ++SFG +L ++ + P + +P++ F
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP-------YPGIPVEELFK 247
Query: 288 ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL---ASRCLQYEPRERPNTKDLVSTLAP 344
L EG+ + A +L C P +RP K LV L
Sbjct: 248 LLK---------------EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDR 292
Query: 345 LQNRPDVPSYVMLGIPRHEEAPPTPQHPLS 374
+ Y+ L +P + +P P P S
Sbjct: 293 VLTVTSTDEYLDLSVPFEQYSPGCPDSPSS 322
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 8e-07
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR 174
+ F +EA + L+H +L L + ++ EYM +L L E +
Sbjct: 46 QAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL 105
Query: 175 LRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-------NSRDGK 227
+ + IAE + Y + ++ DL A VL E+ +++ FGL + +R+G
Sbjct: 106 IDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA 164
Query: 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP 269
+ + +T PE + G T +S ++SFG +L ++++ IP
Sbjct: 165 KFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 50.5 bits (120), Expect = 9e-07
Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 43/196 (21%)
Query: 91 LQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150
L+D +DN R K F EA + L+H+ + G C +GD ++V E
Sbjct: 43 LKDASDNAR---------------KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 87
Query: 151 YMPNDTLAKHL-FHWENQT----------IEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199
YM + L K L H + + + L +A IA + Y +S+ ++ DL
Sbjct: 88 YMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDL 146
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-----------LAYTPPEYLRNGRVTP 248
L EN ++ FG+ SRD YST+ + + PPE + + T
Sbjct: 147 ATRNCLVGENLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTT 201
Query: 249 ESVIFSFGTVLLDLLS 264
ES ++S G VL ++ +
Sbjct: 202 ESDVWSLGVVLWEIFT 217
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 1e-06
Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 127 LRHKRLANLIGYCCDGDER--LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEA 184
L H+ + G C + + L+ EY+P +L +L + A L A I E
Sbjct: 63 LYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL---PKHKLNLAQLLLFAQQICEG 119
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY-------STNLAYTP 237
+ Y S+ ++ DL A VL D + ++ FGL K +G Y + + +
Sbjct: 120 MAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 178
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK-- 295
E L+ + + S ++SFG L +LL+ H + P KF +MI K
Sbjct: 179 VECLKENKFSYASDVWSFGVTLYELLT--HCDSKQ------SPPKKF----EEMIGPKQG 226
Query: 296 --NILHLMDSHLEG------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347
++ L++ G +E V+ L C + E + RP + L+ L + +
Sbjct: 227 QMTVVRLIELLERGMRLPCPKNCPQE---VYILMKNCWETEAKFRPTFRSLIPILKEMHH 283
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 1e-06
Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHL-MCDQPDAALR 474
+ + G+ F+ ++ A++ Y + +++ + Y +L +L + + AL
Sbjct: 1 DNAEALKNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALE 59
Query: 475 DAMQA 479
D +A
Sbjct: 60 DLEKA 64
|
Length = 69 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 2e-06
Identities = 61/268 (22%), Positives = 102/268 (38%), Gaps = 53/268 (19%)
Query: 101 IAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAK 159
+AVK + A D F EA + + H + L+G C G L+ EYM L +
Sbjct: 38 VAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 97
Query: 160 HLFH----WENQTIEWAMRLR----------------VALYIAEALDYCSSEGRPLYHDL 199
L H + R +A +A + Y S E + ++ DL
Sbjct: 98 FLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS-ERKFVHRDL 156
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIF 253
L EN +++ FGL +N Y + + + PPE + R T ES ++
Sbjct: 157 ATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVW 216
Query: 254 SFGTVLLDLLSGKHIP---PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310
++G VL ++ S P +H+ V++ +R N+L D N
Sbjct: 217 AYGVVLWEIFSYGMQPYYGMAHEEVIY-------------YVRDGNVLSCPD-----NCP 258
Query: 311 SEEATVVFDLASRCLQYEPRERPNTKDL 338
E +++L C P +RP+ +
Sbjct: 259 LE----LYNLMRLCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 51/271 (18%)
Query: 97 NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156
++ +AVK + + + F EA + L+H+ + G C +G L+V EYM +
Sbjct: 34 DKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGD 93
Query: 157 L----------AKHLFHWENQT---IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
L AK L E+ + L +A IA + Y +S ++ DL
Sbjct: 94 LNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRN 152
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTN-----------LAYTPPEYLRNGRVTPESVI 252
L + ++ FG+ SRD YST+ + + PPE + + T ES I
Sbjct: 153 CLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDI 207
Query: 253 FSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI-RGKNILHLMDSHLEGNFSS 311
+SFG VL ++ + P W + N A++ I +G+ + E
Sbjct: 208 WSFGVVLWEIFTYGKQP-------WYQLS---NTEAIECITQGRELERPRTCPPE----- 252
Query: 312 EEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
V+ + C Q EP++R KD+ S L
Sbjct: 253 -----VYAIMQGCWQREPQQRMVIKDIHSRL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 3e-06
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPLYHDLNAYR 203
L+ +Y+ L HL+ E+ T V +YIAE ALD+ G +Y D+
Sbjct: 82 LILDYVNGGELFTHLYQREHFTES-----EVRVYIAEIVLALDHLHQLG-IIYRDIKLEN 135
Query: 204 VLFDENGDPRLSCFGLMK-----NSRDGKSYSTNLAYTPPEYLRNGRVTPESVI--FSFG 256
+L D G L+ FGL K S+ + Y PE +R G + + +S G
Sbjct: 136 ILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLG 195
Query: 257 TVLLDLLSG 265
+ +LL+G
Sbjct: 196 VLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 3e-06
Identities = 58/272 (21%), Positives = 99/272 (36%), Gaps = 48/272 (17%)
Query: 86 VYKGRLQD----GNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRHKRLANLIGYCC 140
VY+G D G+ R +AVK K A K +F EA + H + L+G C
Sbjct: 11 VYEGTATDILGPGSGPIR-VAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL 69
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS-----SEGRPL 195
+ + ++ E M L +L + + L + + LD + +
Sbjct: 70 LNEPQYIIMELMEGGDLLSYLRDARVERFGPPL-LTLKELLDICLDVAKGCVYLEQMHFI 128
Query: 196 YHDLNAYRVLFDENGDPR-----LSCFGLMKNSRDGKSYST------NLAYTPPEYLRNG 244
+ DL A L E G + FGL ++ Y + + PE L +G
Sbjct: 129 HRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDG 188
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303
+ T +S ++SFG ++ ++L+ P P+ + N L +
Sbjct: 189 KFTTQSDVWSFGVLMWEILTLGQQPYPALN-----------NQEVLQHVTA--------- 228
Query: 304 HLEGNFSSEEATV--VFDLASRCLQYEPRERP 333
G E ++ L + C +P ERP
Sbjct: 229 --GGRLQKPENCPDKIYQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 6e-06
Identities = 63/277 (22%), Positives = 102/277 (36%), Gaps = 49/277 (17%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-------FADEAWGVGKLRHKRLANLIGY 138
+YKG L+ +D + F + A + +L HK L L G
Sbjct: 11 IYKGVLRVQSDLDIVGPGQ-EVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGV 69
Query: 139 CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE------- 191
C DE ++V EY+ L L H E + +L VA +A AL Y +
Sbjct: 70 CV-RDENIMVEEYVKFGPLDVFL-HREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNV 127
Query: 192 -GRPLY---HDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVT 247
G+ + + LN V F + DP + L + R + + PE +RNG+ +
Sbjct: 128 CGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERI-----PWIAPECIRNGQAS 182
Query: 248 PESV--IFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305
+SFGT LL++ S P L + D H
Sbjct: 183 LTIAADKWSFGTTLLEICSNGEEP----------------LSTLS--SSEKERFYQDQHR 224
Query: 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
E + +L ++C Y+P +RP+ + ++ L
Sbjct: 225 LPMPDCAE---LANLINQCWTYDPTKRPSFRAILRDL 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 6e-06
Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 39/273 (14%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYCCDG 142
V++G L+ +A+K T KQ F EA +G+ H + L G
Sbjct: 21 VFRGILKMPGRKEVAVAIK--TLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF 78
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY--IAEALDYCSSEGRPLYHDLN 200
+++ EYM N L K+L + E++ V + IA + Y S+ ++ DL
Sbjct: 79 KPAMIITEYMENGALDKYL---RDHDGEFSSYQLVGMLRGIAAGMKYL-SDMNYVHRDLA 134
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGK--SYSTN-----LAYTPPEYLRNGRVTPESVIF 253
A +L + N + ++S FGL + D +Y+T+ + +T PE + + T S ++
Sbjct: 135 ARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVW 194
Query: 254 SFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR-GKNILHLMDSHLEGNFSSE 312
SFG V+ +++S P W+ N + I G + MD
Sbjct: 195 SFGIVMWEVMSFGERP------YWDMS----NHEVMKAINDGFRLPAPMDC--------- 235
Query: 313 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
+ V+ L +C Q + RP D+V+ L L
Sbjct: 236 -PSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 7e-06
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP--- 237
I + LDY SE + ++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 238 -PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296
PE ++ ++ I+S G ++L G+ PP+ DM P++ F
Sbjct: 169 APEVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDM-----HPMRVLF---------L 212
Query: 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 339
I L G FS + CL +P RP K+L+
Sbjct: 213 IPKNNPPTLTGEFSKPFK----EFIDACLNKDPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 8e-06
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 18/192 (9%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V +GRL+ ++A+K K + + + F EA +G+ H + +L G
Sbjct: 20 VCRGRLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR 78
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQ--TIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
+++ E+M N L L + Q I+ LR IA + Y SE ++ DL A
Sbjct: 79 PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL-SEMNYVHRDLAA 134
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKS---YSTNLA------YTPPEYLRNGRVTPESVI 252
+L + N ++S FGL + D S Y+++L +T PE + + T S +
Sbjct: 135 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDV 194
Query: 253 FSFGTVLLDLLS 264
+S+G V+ +++S
Sbjct: 195 WSYGIVMWEVMS 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 8e-06
Identities = 61/277 (22%), Positives = 114/277 (41%), Gaps = 35/277 (12%)
Query: 72 DFIVSES-GEKAPNVVYKGRLQDGNDNRRWIAVKK--FTKHAWPDPKQFADEAWGVGKLR 128
DF + G+ + VV+K + ++R A+K+ +K + ++ DEA + KL
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKA---DKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD 57
Query: 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC 188
+ D + +V EY N L K L + + R + I L +
Sbjct: 58 SSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHL 117
Query: 189 SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNG 244
S+ + L+ D+ + + D + ++ G+ K D +++ + TP PE +
Sbjct: 118 HSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDK 176
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL--DMIRGKNILHLMD 302
+S +++ G VL + +GKH P + N GAL +IRG
Sbjct: 177 PYNEKSDVWALGVVLYECCTGKH-PFDAN-----------NQGALILKIIRGVF------ 218
Query: 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 339
+ +S + + L +CL + R+RP+T L+
Sbjct: 219 PPVSQMYSQQ----LAQLIDQCLTKDYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 8e-06
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 79 GEKAPNVVYKG-RLQDGNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRHKRLANLI 136
G A VYKG + +G + +A+K + P +F DEA + + H L L+
Sbjct: 16 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 75
Query: 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
G C + LV + MP+ L ++ H I + L + IA+ + Y E R ++
Sbjct: 76 GVCLSPTIQ-LVTQLMPHGCLLDYV-HEHKDNIGSQLLLNWCVQIAKGMMYL-EERRLVH 132
Query: 197 HDLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYSTNLAYTPPEYL-----RNGRVTPES 250
DL A VL +++ FGL + D K Y+ + P +++ + T +S
Sbjct: 133 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 192
Query: 251 VIFSFGTVLLDLLS 264
++S+G + +L++
Sbjct: 193 DVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 9e-06
Identities = 55/297 (18%), Positives = 108/297 (36%), Gaps = 53/297 (17%)
Query: 69 FSSDFIVSESGEK-APNVVYKG---RLQDGNDNRRWIAVKKFTKHAWPDPK----QFADE 120
I S+ +K ++ + + G N + + ++ F K K +E
Sbjct: 10 NDIKCIESDDIDKYTSVLIKENDQNSIYKGIFNNKEVIIRTF-KKFHKGHKVLIDITENE 68
Query: 121 AWGVGKLRHKRLANLIGY---CCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLR 176
+ ++ + + G+ D RL L+ EY L + L + + + +L
Sbjct: 69 IKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK--EKDLSFKTKLD 126
Query: 177 VALYIAEAL-DYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-LA 234
+A+ + L + +P Y +L + L EN ++ C GL K + N +
Sbjct: 127 MAIDCCKGLYNLYKYTNKP-YKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMV 185
Query: 235 YTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSH-------DMVVWNTVPIKFN 285
Y + L + T + I+S G VL ++ +GK IP + D+++ +K
Sbjct: 186 YFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGK-IPFENLTTKEIYDLIINKNNSLKLP 244
Query: 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
I K I+ C ++ +RPN K+++ L
Sbjct: 245 LDCPLEI--KCIV-----------------------EACTSHDSIKRPNIKEILYNL 276
|
Length = 283 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 44/210 (20%), Positives = 78/210 (37%), Gaps = 37/210 (17%)
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL-------MKNSRDGKS 228
++++ + L Y + + ++ D+ +L + G+ +L FG+ M NS G
Sbjct: 103 KISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 162
Query: 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH-IPPSHDMVVWNTVPIKFNFG 287
+Y PE L+ T +S I+S G L+++ G++ IPP + + G
Sbjct: 163 -----SYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEG 217
Query: 288 ALDMIRGKNILHLMDS-------------------HLEGNFSSEEATVVFDLASRCLQYE 328
H DS L S+E D +CL+
Sbjct: 218 EAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDE---FQDFVDKCLKKN 274
Query: 329 PRERPNTKDLVSTLAPLQNRPDVPSYVMLG 358
P+ER + K+L P R ++ G
Sbjct: 275 PKERADLKELTK--HPFIKRAELEEVDFAG 302
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 11/187 (5%)
Query: 86 VYKGR-LQDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VYKG + +G + +A+K + P K+ DEA+ + + H + L+G C
Sbjct: 23 VYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-SS 81
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
+ L+ + MP L ++ I L + IA+ + Y E R ++ DL A
Sbjct: 82 QVQLITQLMPLGCLLDYV-RNHKDNIGSQYLLNWCVQIAKGMSYL-EEKRLVHRDLAARN 139
Query: 204 VLFDENGDPRLSCFGLMKN-SRDGKSYSTNLAYTP-----PEYLRNGRVTPESVIFSFGT 257
VL +++ FGL K D K Y P E + + T +S ++S+G
Sbjct: 140 VLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGV 199
Query: 258 VLLDLLS 264
+ +L++
Sbjct: 200 TVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 3e-05
Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 36/244 (14%)
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDER------LLVAEYMPNDTLAKHLFHW---- 164
+ F EA + + H + LIG C E +++ +M + L L +
Sbjct: 45 EDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGD 104
Query: 165 ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224
Q + M ++ IA ++Y SS+ ++ DL A + +EN + ++ FGL K
Sbjct: 105 CPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIY 163
Query: 225 DGKSYSTNLAYTPP------EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWN 278
+G Y P E L + T +S ++SFG + ++ + P
Sbjct: 164 NGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP--------- 214
Query: 279 TVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
P N D +R N L L+G ++ L S C P++RP+ + L
Sbjct: 215 -YPGVENSEIYDYLRQGNRLKQPPDCLDG---------LYSLMSSCWLLNPKDRPSFETL 264
Query: 339 VSTL 342
L
Sbjct: 265 RCEL 268
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL-RVA-------- 178
+HK + NL+G C ++ EY L ++L +E++ + RV
Sbjct: 79 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKD 138
Query: 179 -----LYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK--NSRDGKSYST 231
+A ++Y +S+ + ++ DL A VL EN +++ FGL + N+ D +T
Sbjct: 139 LVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTT 197
Query: 232 N----LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG 287
N + + PE L + T +S ++SFG ++ ++ + P + +P++ F
Sbjct: 198 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP-------YPGIPVEELFK 250
Query: 288 ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
L G H MD N ++E ++ + C P RP K LV L
Sbjct: 251 LLK--EG----HRMDK--PANCTNE----LYMMMRDCWHAIPSHRPTFKQLVEDL 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 3e-05
Identities = 52/199 (26%), Positives = 78/199 (39%), Gaps = 36/199 (18%)
Query: 142 GDERLLVAEYMPN---DTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPL 195
D LV EY+ +L K L WA + YIAE ++ G +
Sbjct: 69 KDYLYLVMEYLNGGDCASLIKTLGGLPED---WAKQ-----YIAEVVLGVEDLHQRG-II 119
Query: 196 YHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSF 255
+ D+ +L D+ G +L+ FGL +N + K + Y PE + S +S
Sbjct: 120 HRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSL 179
Query: 256 GTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH-LMDSHLEGN-FSSEE 313
G V+ + L G PP F+ D + NIL ++ E F S E
Sbjct: 180 GCVIFEFLFG--YPP-------------FHAETPDAVF-DNILSRRINWPEEVKEFCSPE 223
Query: 314 ATVVFDLASRCLQYEPRER 332
A DL +R L +P +R
Sbjct: 224 AV---DLINRLLCMDPAKR 239
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 4e-05
Identities = 58/284 (20%), Positives = 113/284 (39%), Gaps = 40/284 (14%)
Query: 79 GEKAPNVVYKG-RLQDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKLRHKRLANLI 136
G A VYKG + DG + + +A+K ++ P K+ DEA+ + + + L+
Sbjct: 16 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLL 75
Query: 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-----IEWAMRLRVALYIAEALDYCSSE 191
G C +L V + MP L ++ +++ + W ++ IA+ + Y E
Sbjct: 76 GICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQ------IAKGMSYLE-E 127
Query: 192 GRPLYHDLNAYRVLFDENGDPRLSCFGLMKN-SRDGKSYSTNLAYTPPEYLR-----NGR 245
R ++ DL A VL +++ FGL + D Y + P +++ + R
Sbjct: 128 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRR 187
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305
T +S ++S+G + +L++ F D I + I L++
Sbjct: 188 FTHQSDVWSYGVTVWELMT-------------------FGAKPYDGIPAREIPDLLEKGE 228
Query: 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349
V+ + +C + RP ++LV + + P
Sbjct: 229 RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 5e-05
Identities = 59/241 (24%), Positives = 92/241 (38%), Gaps = 71/241 (29%)
Query: 126 KLRHKRLANLIGYC---CDGDERLLVAEYMPNDTLAKHL---------FHWENQTIEWAM 173
KL H N+I Y + + +V EY L++ + F E Q ++W
Sbjct: 55 KLNHP---NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFP-EEQILDWF- 109
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL 233
+ + AL Y S + L+ D+ + NG +L FG+ K S+ +
Sbjct: 110 -----VQLCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTV 157
Query: 234 AY------TP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK 283
TP PE +N +S I+S G VL +L + KH P
Sbjct: 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH-------------P-- 202
Query: 284 FNFGALDMIRGKNILHLMDSHLEGNFS------SEEATVVFDLASRCLQYEPRERPNTKD 337
F G+N+L L L+G + S E + +L S LQ +P ERP+
Sbjct: 203 FE--------GENLLELALKILKGQYPPIPSQYSSE---LRNLVSSLLQKDPEERPSIAQ 251
Query: 338 L 338
+
Sbjct: 252 I 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 45.1 bits (106), Expect = 5e-05
Identities = 56/261 (21%), Positives = 111/261 (42%), Gaps = 39/261 (14%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+A+K+ P + +E + +L++ + N + GDE +V EY+ +L
Sbjct: 47 VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV 106
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
+ + A R L +AL++ + + ++ D+ + VL +G +L+ FG
Sbjct: 107 VTETCMDEAQIAAVCRECL---QALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFGFC 162
Query: 221 KNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVV 276
+S + + TP PE + P+ I+S G + ++++ G+ PP
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PP-----Y 215
Query: 277 WNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DLASRCLQYEPRERPNT 335
N P++ AL +I L + E+ + +F D +RCL+ + +R +
Sbjct: 216 LNENPLR----ALYLIATNGTPELQN--------PEKLSPIFRDFLNRCLEMDVEKRGSA 263
Query: 336 KDL-----------VSTLAPL 345
K+L +S+L PL
Sbjct: 264 KELLQHPFLKLAKPLSSLTPL 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 6e-05
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 177 VALYIAE---ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KSYS- 230
V Y+AE ALD+ S G +Y DL +L DE G +L+ FGL K S D K+YS
Sbjct: 100 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158
Query: 231 -TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG 265
+ Y PE + T + +SFG ++ ++L+G
Sbjct: 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 6e-05
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 22/174 (12%)
Query: 176 RVALYIAEA----LDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL---MKNSRDGK 227
+V IAE+ L Y S R + H D+ +L G +L FG+ + NS G
Sbjct: 105 KVLGKIAESVLKGLSYLHS--RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGT 162
Query: 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH-IPPSHDMVVWNTVPIKFNF 286
T+ Y PE ++ + S ++S G LL++ + PP + + PI+
Sbjct: 163 FTGTSF-YMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL---GPIEL-- 216
Query: 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVS 340
L I L D G SEE D +CL+ +P RP D++
Sbjct: 217 --LSYIVNMPNPELKDEPGNGIKWSEEFK---DFIKQCLEKDPTRRPTPWDMLE 265
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 7e-05
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ--TIEWA 172
+ F EA +G+ H + +L G ++V EYM N +L L + Q I+
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV 109
Query: 173 MRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KSYS 230
LR IA + Y S G ++ DL A +L + N ++S FGL + D +Y+
Sbjct: 110 GMLR---GIASGMKYLSDMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT 165
Query: 231 TN-----LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS 264
T + +T PE + + T S ++S+G V+ +++S
Sbjct: 166 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 58/288 (20%), Positives = 122/288 (42%), Gaps = 47/288 (16%)
Query: 77 ESGEKAPNVVY----KGRLQDGNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRHKR 131
E G+ + +VY KG ++D + R +A+K + A + +F +EA + +
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCHH 70
Query: 132 LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR--------LRVALYIAE 183
+ L+G G L++ E M L +L + ++ +++A IA+
Sbjct: 71 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIAD 130
Query: 184 ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN------SRDGKSYSTNLAYTP 237
+ Y ++ + ++ DL A + E+ ++ FG+ ++ R G + +
Sbjct: 131 GMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 189
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297
PE L++G T S ++SFG VL ++ + P +G +
Sbjct: 190 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----------------------YQGMSN 227
Query: 298 LHLMDSHLEGNFSSEEAT---VVFDLASRCLQYEPRERPNTKDLVSTL 342
++ +EG + ++F+L C QY P+ RP+ +++S++
Sbjct: 228 EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 46/223 (20%), Positives = 91/223 (40%), Gaps = 28/223 (12%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEAL 185
+L H + ++G C+ L E+M +++ HL + + A+ + + L
Sbjct: 59 RLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVS-HLLS-KYGAFKEAVIINYTEQLLRGL 116
Query: 186 DYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLM-----KNSRDGK---SYSTNLAYT 236
Y E + ++ D+ +L D G R++ FG K + G+ +A+
Sbjct: 117 SYLH-ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFM 175
Query: 237 PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296
PE LR + ++S G V++++ + K PP WN + + I
Sbjct: 176 APEVLRGEQYGRSCDVWSVGCVIIEMATAK--PP------WNAEKHSNHLALIFKIASAT 227
Query: 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 339
+ HL + D+ RCL+ +P +RP +++L+
Sbjct: 228 TAPSIPEHLSPG--------LRDVTLRCLELQPEDRPPSRELL 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|215568 PLN03088, PLN03088, SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALR 474
M LE + + AF + +F AVD Y+Q ID+ + +YA R+ ++ A+
Sbjct: 1 MAKDLEDKAKE--AFVDDDFALAVDLYTQAIDLDP-NNAELYADRAQANIKLGNFTEAVA 57
Query: 475 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
DA +A + P + A+ + A KL+ ++ A L++ ASL
Sbjct: 58 DANKAIELDPSLAKAYLRKGTACMKLEEYQTAKAALEKGASLA 100
|
Length = 356 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTK-HAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VY G L D + + AVK + + +QF E + H + +L+G C +
Sbjct: 10 CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69
Query: 144 -ERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN 200
L+V YM + L ++ E N T++ + L +A+ ++Y +S+ + ++ DL
Sbjct: 70 GSPLVVLPYMKHGDL-RNFIRSETHNPTVKDLIGF--GLQVAKGMEYLASK-KFVHRDLA 125
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--------LAYTPPEYLRNGRVTPESVI 252
A + DE+ +++ FGL ++ D + YS + + + E L+ + T +S +
Sbjct: 126 ARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDV 185
Query: 253 FSFGTVLLDLLSGKHIPPSHDM 274
+SFG +L +L++ + PP D+
Sbjct: 186 WSFGVLLWELMT-RGAPPYPDV 206
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 1e-04
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 27/181 (14%)
Query: 107 TKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWEN 166
K+A D F E + +L+ + L+G C D D ++ EYM N L + L
Sbjct: 59 NKNARND---FLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHL 115
Query: 167 Q-----------------TIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209
I ++ L VAL IA + Y SS ++ DL L EN
Sbjct: 116 DDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF-VHRDLATRNCLVGEN 174
Query: 210 GDPRLSCFGLMKNSRDGKSYSTNLAYTPP------EYLRNGRVTPESVIFSFGTVLLDLL 263
+++ FG+ +N G Y P E + G+ T S +++FG L ++L
Sbjct: 175 LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234
Query: 264 S 264
Sbjct: 235 M 235
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 48/241 (19%), Positives = 85/241 (35%), Gaps = 35/241 (14%)
Query: 114 PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAM 173
F EA + L H+ L L G ++V E P +L L +
Sbjct: 40 MDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLIST 98
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN- 232
A+ IA + Y S+ R ++ DL A +L + ++ FGLM+ + +
Sbjct: 99 LCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME 157
Query: 233 ------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNF 286
A+ PE LR + S ++ FG L ++ + P +
Sbjct: 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG-------------- 203
Query: 287 GALDMIRGKNILHLMDSHLE----GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
+ G IL +D E ++ ++++ +C + P +RP L L
Sbjct: 204 -----LSGSQILKKIDKEGERLERPEACPQD---IYNVMLQCWAHNPADRPTFAALREFL 255
Query: 343 A 343
Sbjct: 256 P 256
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 57/276 (20%), Positives = 107/276 (38%), Gaps = 53/276 (19%)
Query: 101 IAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTL-- 157
+AVK ++A + + E + ++ H + L G C LL+ EY +L
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 158 --------------------AKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
+ +L + + + + + A I+ + Y + E + ++
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA-EMKLVHR 151
Query: 198 DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESV 251
DL A VL E ++S FGL ++ + SY + + E L + T +S
Sbjct: 152 DLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD 211
Query: 252 IFSFGTVLLDL--LSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309
++SFG +L ++ L G P ++N + + M R +N
Sbjct: 212 VWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYR-----MERPEN------------- 253
Query: 310 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
SEE +++L C + EP +RP D+ L +
Sbjct: 254 CSEE---MYNLMLTCWKQEPDKRPTFADISKELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 64/298 (21%), Positives = 123/298 (41%), Gaps = 57/298 (19%)
Query: 74 IVSESGEKAPNVVYKG---RLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRH 129
++ E G+ + +VY+G + G R +A+K ++A + +F +EA + +
Sbjct: 10 LIRELGQGSFGMVYEGLAKGVVKGEPETR-VAIKTVNENASMRERIEFLNEASVMKEFNC 68
Query: 130 KRLANLIGYCCDGDERLLVAEYMPNDTLAKHL-------FHWENQTIEWAMR-LRVALYI 181
+ L+G G L+V E M L +L + + +++A I
Sbjct: 69 HHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEI 128
Query: 182 AEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------- 232
A+ + Y ++ + H DL A + E+ ++ FG+ +RD Y T+
Sbjct: 129 ADGMAYLAA--KKFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYRKGGKG 181
Query: 233 ---LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP---PSHDMVVWNTVPIKFNF 286
+ + PE L++G T +S ++SFG VL ++ + P S++ V
Sbjct: 182 LLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV----------- 230
Query: 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344
L + L L ++ + + +L C QY P+ RP ++VS+L
Sbjct: 231 --LKFVIDGGHLDLPENCPD---------KLLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPLYHDL 199
D LV M L H++H E R Y AE L+ E R +Y DL
Sbjct: 73 DALCLVLTLMNGGDLKFHIYHMGEAGFEEG---RAVFYAAEICCGLEDLHQE-RIVYRDL 128
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFG 256
+L D++G R+S GL + +G K + Y PE ++N R T ++ G
Sbjct: 129 KPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 188
Query: 257 TVLLDLLSGK 266
+L ++++G+
Sbjct: 189 CLLYEMIAGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 68/288 (23%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 74 IVSESGEKAPNVVYKGRLQD---GNDNRRWIAVKKFTKHAWPDPK-QFADEAWGVGKLRH 129
++ E G+ + +VY+G +D G R +AVK + A + +F +EA +
Sbjct: 10 LLRELGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTC 68
Query: 130 KRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLR----VALYI 181
+ L+G G L+V E M + L +L EN L+ +A I
Sbjct: 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 182 AEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN------SRDGKSYSTNLAY 235
A+ + Y +++ + ++ DL A + + ++ FG+ ++ R G + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 236 TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295
PE L++G T S ++SFG VL ++ S P + N +KF
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---LSNEQVLKF----------- 233
Query: 296 NILHLMD-SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
+MD +L+ + E V DL C Q+ P+ RP ++V+ L
Sbjct: 234 ----VMDGGYLDQPDNCPER--VTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 69/302 (22%), Positives = 115/302 (38%), Gaps = 51/302 (16%)
Query: 68 NFSSDFIVSESGEKAPNVVYKGRL--QDGNDNRRWIAVKKFT-KHAWPDPKQFADEAWGV 124
N S+ + E GE VYKG L + + +A+K K P ++F EA
Sbjct: 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMR 62
Query: 125 GKLRHKRLANLIG-------------YCCDGD-ERLLVAEYMPNDTLAKHLFHWENQTIE 170
+L+H + L+G YC D LV +D + T+E
Sbjct: 63 SRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLE 122
Query: 171 WAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS 230
A + + IA +++ SS ++ DL VL + + ++S GL + Y
Sbjct: 123 PADFVHIVTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYK 181
Query: 231 T------NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP----PSHDMVVWNTV 280
+ + PE + G+ + +S I+S+G VL ++ S P + D++
Sbjct: 182 LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI----- 236
Query: 281 PIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVS 340
+MIR + +L D + V+ L C P RP KD+ S
Sbjct: 237 ---------EMIRNRQVLPCPD---------DCPAWVYTLMLECWNEFPSRRPRFKDIHS 278
Query: 341 TL 342
L
Sbjct: 279 RL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 3e-04
Identities = 68/297 (22%), Positives = 104/297 (35%), Gaps = 76/297 (25%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWG-----------VGKLRHKRLAN 134
VYK R + +A+KK +E G + KLRH +
Sbjct: 15 VYKAR--NKKTGEL-VALKKIRME---------NEKEGFPITAIREIKLLQKLRHPNIVR 62
Query: 135 LIGYC--CDGDERLLVAEYMPND------------TLA--KHLFHWENQTIEWAMRLRVA 178
L +V EYM +D T + K Q
Sbjct: 63 LKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMK---Q----------- 108
Query: 179 LYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK--NSRDGKSYSTN---- 232
+ E L Y S G L+ D+ +L + +G +L+ FGL + R+ Y TN
Sbjct: 109 --LLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY-TNRVIT 164
Query: 233 LAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHI-PPSHDM----VVWNTV--PIK 283
L Y PPE L G R PE ++S G +L +L GK I S ++ ++ P
Sbjct: 165 LWYRPPELLL-GATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTD 223
Query: 284 FNF-GALDMIRGKNILHL--MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKD 337
N+ G + +N+ L F DL + L +P++R +
Sbjct: 224 ENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQ 280
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF 206
+V EYM +LA + I + +A I + LDY ++ ++ D+ +L
Sbjct: 76 IVLEYMDGGSLAD--LLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI 133
Query: 207 DENGDPRLSCFG---LMKNSRDGK-SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 262
+ G+ +++ FG +++N+ D ++ + Y PE ++ + + I+S G LL+
Sbjct: 134 NSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLEC 193
Query: 263 LSGKH-IPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS---HLEGNFSSEEATVVF 318
GK P + ++++ + D L S E
Sbjct: 194 ALGKFPFLPPGQPSFF------------ELMQ-----AICDGPPPSLPAEEFSPEFR--- 233
Query: 319 DLASRCLQYEPRERPNTKDLVS 340
D S CLQ +P++RP+ +L+
Sbjct: 234 DFISACLQKDPKKRPSAAELLQ 255
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 49/230 (21%), Positives = 83/230 (36%), Gaps = 35/230 (15%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE-- 183
+L H L NL D + LV + + L HL + E +V +I E
Sbjct: 56 ELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEE-----QVKFWICEIV 110
Query: 184 -ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---SYSTNLAYTPPE 239
AL+Y S+G ++ D+ +L DE G ++ F + S S Y PE
Sbjct: 111 LALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPE 169
Query: 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299
L + +S G + L GK P + + + I
Sbjct: 170 VLCRQGYSVAVDWWSLGVTAYECLRGK-------------RP--YRGHSRTIR--DQIRA 212
Query: 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349
++ + + +T D ++ L+ +P++R L L L+N P
Sbjct: 213 KQETADV-LYPATWSTEAIDAINKLLERDPQKR-----LGDNLKDLKNHP 256
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 5e-04
Identities = 53/244 (21%), Positives = 103/244 (42%), Gaps = 28/244 (11%)
Query: 101 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160
+A+K+ P + +E + + ++ + N + GDE +V EY+ +L
Sbjct: 47 VAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 106
Query: 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
+ + A R L +ALD+ S + ++ D+ + +L +G +L+ FG
Sbjct: 107 VTETCMDEGQIAAVCRECL---QALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFC 162
Query: 221 KNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVV 276
+S + + TP PE + P+ I+S G + ++++ G+ PP
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PP-----Y 215
Query: 277 WNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DLASRCLQYEPRERPNT 335
N P++ AL +I L + E + VF D +RCL+ + R +
Sbjct: 216 LNENPLR----ALYLIATNGTPELQN--------PERLSAVFRDFLNRCLEMDVDRRGSA 263
Query: 336 KDLV 339
K+L+
Sbjct: 264 KELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 32/231 (13%)
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR 174
KQ E + KL+H + +G + D + E +P +LAK L + +
Sbjct: 47 KQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEP---- 102
Query: 175 LRVALY---IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS---RDGKS 228
+ LY I L+Y ++ D+ +L D NG +L+ FG+ K KS
Sbjct: 103 -VIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS 160
Query: 229 YSTNLAYTPPEYL-RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG 287
+ + + PE + + G + I+S G +L++ +GK PP +
Sbjct: 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK--PPWSQL---------EGVA 209
Query: 288 ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
A+ I L + HL S+EA D +CLQ +P RP +L
Sbjct: 210 AVFKIGRSKELPPIPDHL-----SDEAK---DFILKCLQRDPSLRPTAAEL 252
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 5e-04
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTN 232
++A+ + E L Y + R ++ D+ +L + G +L FG+ + NS T+
Sbjct: 107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTS 166
Query: 233 LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP--PSHDMVVWNTVPIKFNFGALD 290
Y PE ++ G+ T +S ++S G +++L GK P S+ P+ G LD
Sbjct: 167 -TYMSPERIQGGKYTVKSDVWSLGISIIELALGK-FPFAFSNIDDDGQDDPM----GILD 220
Query: 291 MIRGKNILHLMDSHL-EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341
++ + I+ L +F + D CL +P ERP + L +
Sbjct: 221 LL--QQIVQEPPPRLPSSDFPE----DLRDFVDACLLKDPTERPTPQQLCAM 266
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 40/235 (17%)
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAM 173
+HK + NL+G C ++ EY L ++L + + +
Sbjct: 82 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKD 141
Query: 174 RLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY--ST 231
+ A +A ++Y +S+ + ++ DL A VL E+ +++ FGL ++ Y +T
Sbjct: 142 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 200
Query: 232 N----LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG 287
N + + PE L + T +S ++SFG +L ++ + P + VP++ F
Sbjct: 201 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP-------YPGVPVEELFK 253
Query: 288 ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
L G H MD N ++E ++ + C P +RP K LV L
Sbjct: 254 LLK--EG----HRMDK--PSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 7e-04
Identities = 61/257 (23%), Positives = 104/257 (40%), Gaps = 43/257 (16%)
Query: 101 IAVKKF----TKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156
+AVK TK A D F E + +L++ + L+G C D ++ EYM N
Sbjct: 47 VAVKMLRADVTKTARND---FLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGD 103
Query: 157 LAKHLFHWENQT----------IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF 206
L + L E ++ + A L +A+ IA + Y +S ++ DL L
Sbjct: 104 LNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNF-VHRDLATRNCLV 162
Query: 207 DENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP------EYLRNGRVTPESVIFSFGTVLL 260
+ +++ FG+ +N G Y P E + G+ T S +++FG L
Sbjct: 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLW 222
Query: 261 DLLSGKHIPP----SHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATV 316
++ + P S + V+ NT G +G+ I +L + L +
Sbjct: 223 EMFTLCKEQPYSLLSDEQVIENT-------GEFFRNQGRQI-YLSQTPLCPS-------P 267
Query: 317 VFDLASRCLQYEPRERP 333
VF L RC + ++RP
Sbjct: 268 VFKLMMRCWSRDIKDRP 284
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 7e-04
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 21/196 (10%)
Query: 90 RLQDGNDNRRWIAV-KKFTKHAWPDPK-------QFADEAWGVGKLRHKRLANLIGYCCD 141
+L G W+A K TK A K F EA + L+H +L L
Sbjct: 13 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 72
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
+ ++ E+M +L L E + + IAE + + E R H DL
Sbjct: 73 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI--EQRNYIHRDLR 129
Query: 201 AYRVLFDENGDPRLSCFGLMK-------NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIF 253
A +L + +++ FGL + +R+G + + +T PE + G T +S ++
Sbjct: 130 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVW 187
Query: 254 SFGTVLLDLLSGKHIP 269
SFG +L+++++ IP
Sbjct: 188 SFGILLMEIVTYGRIP 203
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 7e-04
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRV-ALYIAEALDYCSSEGRPLYHDLNA 201
D V EY L FH + + R R I ALDY SE +Y DL
Sbjct: 68 DRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 124
Query: 202 YRVLFDENGDPRLSCFGLMKNS-RDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGT 257
++ D++G +++ FGL K +DG K++ Y PE L + + G
Sbjct: 125 ENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 184
Query: 258 VLLDLLSGK 266
V+ +++ G+
Sbjct: 185 VMYEMMCGR 193
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.001
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 10/130 (7%)
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPLYHDL 199
D LV M L H+++ N + R Y AE L+ E R +Y DL
Sbjct: 73 DALCLVLTLMNGGDLKFHIYNMGNPGFDEE---RAVFYAAEITCGLEDLHRE-RIVYRDL 128
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFG 256
+L D+ G R+S GL +G + + Y PE ++N R T + G
Sbjct: 129 KPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLG 188
Query: 257 TVLLDLLSGK 266
++ +++ GK
Sbjct: 189 CLIYEMIEGK 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF 206
LV M L H+++ A + A I L++ R +Y DL VL
Sbjct: 70 LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLL 128
Query: 207 DENGDPRLSCFGL---MKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLL 263
D++G+ R+S GL +K + K + Y PE L+ F+ G L +++
Sbjct: 129 DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI 188
Query: 264 SGK 266
+G+
Sbjct: 189 AGR 191
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.001
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 34/269 (12%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKK--FTKHAWPDPKQFADEAWGVGKLRHKRLANLI 136
GE A VYK D + +A+KK K + + +E + +H + +
Sbjct: 28 GEGASGEVYKAT--DRATGKE-VAIKKMRLRK---QNKELIINEILIMKDCKHPNIVDYY 81
Query: 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
GDE +V EYM +L + + E V + + L+Y S+ ++
Sbjct: 82 DSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNE-PQIAYVCREVLQGLEYLHSQNV-IH 139
Query: 197 HDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVI 252
D+ + +L ++G +L+ FG KS ++ TP PE ++ P+ I
Sbjct: 140 RDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDI 199
Query: 253 FSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSE 312
+S G + +++ G+ PP P++ AL +I K I L + +S E
Sbjct: 200 WSLGIMCIEMAEGE--PPYLREP-----PLR----ALFLITTKGIPPLKNPE---KWSPE 245
Query: 313 EATVVF-DLASRCLQYEPRERPNTKDLVS 340
F D ++CL +P +RP+ ++L+
Sbjct: 246 -----FKDFLNKCLVKDPEKRPSAEELLQ 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 37/251 (14%)
Query: 127 LRHKRLANLIGYC----CDGDERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALY 180
L+H R N+I ++ V E + D L + L E Q I++ +
Sbjct: 63 LKHLRHENIISLSDIFISPLEDIYFVTELLGTD-LHRLLTSRPLEKQFIQYFL-----YQ 116
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYSTNLAYTPPE 239
I L Y S G ++ DL +L +EN D ++ FGL + Y + Y PE
Sbjct: 117 ILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPE 175
Query: 240 YLRNGRVTPESV-IFSFGTVLLDLLSGKHIPPSHDMV--------VWNTVPIKFNFGALD 290
+ + V I+S G + ++L GK + P D V + T P ++
Sbjct: 176 IMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDV----IN 231
Query: 291 MIRGKNILHLMDS-------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST-- 341
I +N L + S F + + + + DL + L ++P++R + + ++
Sbjct: 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAI-DLLEKMLVFDPQKRISAAEALAHPY 290
Query: 342 LAPLQNRPDVP 352
LAP + D P
Sbjct: 291 LAPYHDPTDEP 301
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 60/249 (24%), Positives = 95/249 (38%), Gaps = 35/249 (14%)
Query: 50 GAPAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH 109
G F E L + DF + SG + V K +D N N R
Sbjct: 14 GEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNAR---------- 63
Query: 110 AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-- 167
F E + +L+ + L+ C D ++ EYM N L + L E Q
Sbjct: 64 -----NDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEA 118
Query: 168 -------TIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220
TI ++ + +A IA + Y SS ++ DL L +N +++ FG+
Sbjct: 119 AEKADVVTISYSTLIFMATQIASGMKYLSSLNF-VHRDLATRNCLVGKNYTIKIADFGMS 177
Query: 221 KNSRDGKSYSTNLAYTPP------EYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSH- 272
+N G Y P E + G+ T S +++FG L ++L+ K P S
Sbjct: 178 RNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237
Query: 273 --DMVVWNT 279
+ V+ NT
Sbjct: 238 SDEQVIENT 246
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 79 GEKAPNVVYKGR-LQDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKLRHKRLANLI 136
G A VYKG + +G + +A+K+ + P K+ DEA+ + + + + L+
Sbjct: 16 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 75
Query: 137 GYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEGRPL 195
G C + L+ + MP L ++ H +N ++ + V IA+ ++Y E R L
Sbjct: 76 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--IAKGMNYL--EERRL 130
Query: 196 YH-DLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYSTNLAYTPPEYLRNGRV-----TP 248
H DL A VL +++ FGL K D K Y P +++ + T
Sbjct: 131 VHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTH 190
Query: 249 ESVIFSFGTVLLDLLS 264
+S ++S+G + +L++
Sbjct: 191 QSDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 35/200 (17%)
Query: 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209
EYM +L K L + + E + ++A+ + + L Y + + ++ D+ +L +
Sbjct: 79 EYMDGGSLDKILKEVQGRIPERILG-KIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSR 137
Query: 210 GDPRLSCFGLMKNSRD--GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH 267
G +L FG+ + K++ +Y PE ++ + +S I+S G L++L +G+
Sbjct: 138 GQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF 197
Query: 268 -IPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE--------GNFSSEEATVVF 318
PP N P I L+ + G FS +
Sbjct: 198 PYPP------ENDPP-------------DGIFELLQYIVNEPPPRLPSGKFSPD----FQ 234
Query: 319 DLASRCLQYEPRERPNTKDL 338
D + CL +PRERP+ K+L
Sbjct: 235 DFVNLCLIKDPRERPSYKEL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 22/144 (15%)
Query: 138 YCC--DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALYIAE---ALDYCS 189
YCC D V E++ L +FH I+ + R R Y AE AL +
Sbjct: 62 YCCFQTPDRLFFVMEFVNGGDL---MFH-----IQKSRRFDEARARFYAAEITSALMFLH 113
Query: 190 SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS-RDGKSYSTNLA---YTPPEYLRNGR 245
+G +Y DL VL D G +L+ FG+ K +GK+ ST Y PE L+
Sbjct: 114 DKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEML 172
Query: 246 VTPESVIFSFGTVLLDLLSGKHIP 269
P ++ G +L ++L G H P
Sbjct: 173 YGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 177 VALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
+ + L+Y EG+ ++ D+ A +L E GD +L+ FG+ S T
Sbjct: 103 ILREVLLGLEYLHEEGK-IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGT 161
Query: 237 P----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI 292
P PE ++ ++ I+S G ++L G+ PP D+ P++ L +I
Sbjct: 162 PFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE--PPLSDLH-----PMR----VLFLI 210
Query: 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
N LEGN S+ D S CL +P+ERP+ K+L
Sbjct: 211 PKNNP-----PSLEGNKFSKPFK---DFVSLCLNKDPKERPSAKEL 248
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 10/130 (7%)
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGRPLYHDL 199
D LV M L H+++ N E R Y AE L+ E +Y DL
Sbjct: 73 DALCLVLTIMNGGDLKFHIYNMGNPGFE---EERALFYAAEILCGLEDLHREN-TVYRDL 128
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYS---TNLAYTPPEYLRNGRVTPESVIFSFG 256
+L D+ G R+S GL +G+S + Y PE L N R T + G
Sbjct: 129 KPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLG 188
Query: 257 TVLLDLLSGK 266
++ +++ G+
Sbjct: 189 CLIYEMIEGQ 198
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC 188
H+ + NL+G C G L++ EY L L + L + +A+ + +
Sbjct: 98 HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL 157
Query: 189 SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY----STNL--AYTPPEYLR 242
+S+ ++ DL A VL ++ FGL ++ + +Y + L + PE +
Sbjct: 158 ASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF 216
Query: 243 NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302
N T ES ++S+G +L ++ S P + +P+ F L + G + M
Sbjct: 217 NCVYTFESDVWSYGILLWEIFSLGSNP-------YPGMPVDSKFYKL-IKEG----YRMA 264
Query: 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343
+ E ++D+ C +P +RP K +V +
Sbjct: 265 QPE---HAPAE---IYDIMKTCWDADPLKRPTFKQIVQLIG 299
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 52/289 (17%)
Query: 79 GEKAPNVVYKGRL-QDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKL-RHKRLANL 135
GE V K R+ +DG R A+K+ ++A D + FA E + KL H + NL
Sbjct: 16 GEGNFGQVLKARIKKDGL--RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 73
Query: 136 IGYCCDGDERLLVAEYMPNDTL--------------AKHLFHWENQTIEWAMRLRVALYI 181
+G C L EY P+ L A + + T+ L A +
Sbjct: 74 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 133
Query: 182 AEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP--- 238
A +DY S + + ++ DL A +L EN +++ FGL SR + Y P
Sbjct: 134 ARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRW 189
Query: 239 ---EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMV--VWNTVPIKFNFGALDMIR 293
E L T S ++S+G +L +++S P ++ +P +
Sbjct: 190 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--------- 240
Query: 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
LE + ++ V+DL +C + +P ERP+ ++ +L
Sbjct: 241 ----------RLEKPLNCDDE--VYDLMRQCWREKPYERPSFAQILVSL 277
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 193 RPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTP 248
R +Y DL VL D +G+ R+S GL +DG+S + A TP PE L+
Sbjct: 117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDF 176
Query: 249 ESVIFSFGTVLLDLLSGK 266
F+ G L ++++ +
Sbjct: 177 SVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 39.7 bits (92), Expect = 0.003
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 128 RHKRLANLIGYCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRV-ALYIAEAL 185
RH L +L Y +RL V EY+ L FH + + R R I AL
Sbjct: 53 RHPFLTSL-KYSFQTKDRLCFVMEYVNGGEL---FFHLSRERVFSEDRTRFYGAEIVSAL 108
Query: 186 DYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK----NSRDGKSYSTNLAYTPPEYL 241
DY S G+ +Y DL ++ D++G +++ FGL K ++ K++ Y PE L
Sbjct: 109 DYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVL 167
Query: 242 RNGRVTPESVIFSFGTVLLDLLSGK 266
+ + G V+ +++ G+
Sbjct: 168 EDNDYGRAVDWWGLGVVMYEMMCGR 192
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 56/237 (23%), Positives = 94/237 (39%), Gaps = 44/237 (18%)
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR------------- 174
+HK + NL+G C ++ EY L + L ++
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 175 -LRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY--ST 231
+ A +A ++Y S R ++ DL A VL E+ +++ FGL + D Y ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 232 N----LAYTPPEYLRNGRVTPESVIFSFGTVLLDL--LSGKHIPPSHDMVVWNTVPIKFN 285
N + + PE L + T +S ++SFG ++ ++ L G P +P++
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYP---------GIPVEEL 245
Query: 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
F L G H MD N + E ++ L C P +RP K LV L
Sbjct: 246 FKLLR--EG----HRMDK--PSNCTHE----LYMLMRECWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.003
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 99 RWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLA 158
+ +AVKK + +E + +H+ + + GDE +V E++ L
Sbjct: 46 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105
Query: 159 KHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218
+ H + A V L + +AL ++G ++ D+ + +L +G +LS FG
Sbjct: 106 DIVTHTRMNEEQIAA---VCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFG 161
Query: 219 LMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDM 274
+L TP PE + PE I+S G ++++++ G+ PP
Sbjct: 162 FCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE--PP---- 215
Query: 275 VVWNTVPIKFNFGALDMIR 293
+N P+K A+ MIR
Sbjct: 216 -YFNEPPLK----AMKMIR 229
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 41/287 (14%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD----EAWGVGKLRHKRLAN 134
GE + +V K + ++ + +A+KKF + D K E + +LRH+ L N
Sbjct: 10 GEGSYGMVMKCKHKETG---QIVAIKKFLES--EDDKMVKKIAMREIRMLKQLRHENLVN 64
Query: 135 LIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY-IAEALDYCSSEGR 193
LI LV E++ + T+ L + N E R+R L+ I +++C S
Sbjct: 65 LIEVFRRKKRLYLVFEFVDH-TVLDDLEKYPNGLDE--SRVRKYLFQILRGIEFCHSHN- 120
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKN-SRDGKSYSTNLA---YTPPEYL----RNGR 245
++ D+ +L ++G +L FG + + G+ Y+ +A Y PE L + GR
Sbjct: 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGR 180
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH------ 299
I++ G ++ ++L+G+ + P D + I G L + R + I
Sbjct: 181 AVD---IWAVGCLVTEMLTGEPLFPG-DSDIDQLYHIIKCLGNL-IPRHQEIFQKNPLFA 235
Query: 300 ---LMDSH----LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 339
L + LE F +V DLA +CL+ +P +RP++ L+
Sbjct: 236 GMRLPEVKEIEPLEKRFPKLSG-LVLDLAKQCLRIDPDDRPSSSQLL 281
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.004
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 22/148 (14%)
Query: 135 LIGYCCDGDERLLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALYIAEALDYCSS 190
L Y D LV ++ L H+ + E WA + VAL +AL
Sbjct: 50 LHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVAL---DAL---HR 103
Query: 191 EGRPLYHDLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTNLAYTPPEYLRNGRVT 247
EG + DLN +L D+ G +L+ F +++S DG++ Y PE G ++
Sbjct: 104 EG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVEN--MYCAPEV---GGIS 157
Query: 248 PESVI---FSFGTVLLDLLSGKHIPPSH 272
E+ +S G +L +LL+GK + H
Sbjct: 158 EETEACDWWSLGAILFELLTGKTLVECH 185
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 28/195 (14%)
Query: 92 QDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149
+DG + A+K + A D + FA E + KL H + NL+G C + +
Sbjct: 25 KDGL--KMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI 82
Query: 150 EYMPNDTLAKHLF--------------HWENQTIEWAMRLRVALYIAEALDYCSSEGRPL 195
EY P L L H T+ L+ A +A + Y S E + +
Sbjct: 83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS-EKQFI 141
Query: 196 YHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPP------EYLRNGRVTPE 249
+ DL A VL EN +++ FGL SR + Y P E L T +
Sbjct: 142 HRDLAARNVLVGENLASKIADFGL---SRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTK 198
Query: 250 SVIFSFGTVLLDLLS 264
S ++SFG +L +++S
Sbjct: 199 SDVWSFGVLLWEIVS 213
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 38.6 bits (91), Expect = 0.004
Identities = 57/244 (23%), Positives = 94/244 (38%), Gaps = 54/244 (22%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIA--- 182
+L+H + L+ + LV EY D L K+L + + + + I
Sbjct: 54 ELKHPNIVKLLDVIHTERKLYLVFEYCDMD-LKKYL---DKRPG--PLSPNLIKSIMYQL 107
Query: 183 -EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----DGKSYSTN---LA 234
L YC S R L+ DL +L + +G +L+ FGL +R ++Y+ L
Sbjct: 108 LRGLAYCHS-HRILHRDLKPQNILINRDGVLKLADFGL---ARAFGIPLRTYTHEVVTLW 163
Query: 235 YTPPEYLRNGRVTPESV-IFSFGTVLLDLLSGKHIPPS---HDMV-------------VW 277
Y PE L + +V I+S G + ++++GK + P D + W
Sbjct: 164 YRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESW 223
Query: 278 NTVP----IKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 333
V K F K+ LE + + DL S+ LQY P +R
Sbjct: 224 PGVTKLPDYKPTF---PKFPPKD--------LEKVLPRLDPEGI-DLLSKMLQYNPAKRI 271
Query: 334 NTKD 337
+ K+
Sbjct: 272 SAKE 275
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 176 RVALYIAE---ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN 232
R Y AE L + S+G +Y DL V+ D +G +++ FG+ K + G + ++
Sbjct: 97 RATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155
Query: 233 LAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGK 266
TP PE L+ + T +SFG +L ++L G+
Sbjct: 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ 193
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 527 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.98 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.97 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.97 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.95 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.93 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.91 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.91 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.91 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.9 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.9 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.89 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.89 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.88 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.88 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.87 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.87 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.83 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.83 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.83 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.82 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.81 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.81 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.8 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.79 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.79 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.77 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.77 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.72 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.72 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.72 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.71 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.67 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.6 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.58 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.56 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.56 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.56 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.55 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.53 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.52 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.51 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.5 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.49 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.48 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.48 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.48 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.44 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.44 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.43 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.42 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.4 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.39 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.39 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.36 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.34 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.33 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.33 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.32 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.32 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.29 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.29 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.29 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.29 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.28 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.28 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.27 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.26 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.26 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.26 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.25 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.24 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.22 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.21 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.2 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.2 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.19 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.19 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.18 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.18 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.18 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.18 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.18 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.18 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 99.17 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.17 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.15 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.15 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.14 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.14 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.13 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.13 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.12 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.12 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.1 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.08 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.08 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-54 Score=427.03 Aligned_cols=284 Identities=33% Similarity=0.580 Sum_probs=243.8
Q ss_pred cccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCcc
Q 009750 53 AFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRL 132 (527)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nI 132 (527)
....|++.++..+|++|+..+++ |+|+||+||+|... +++.||||++.........+|.+|++++.+++||||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~----~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nl 133 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLS----DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNL 133 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEEC----CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCc
Confidence 67889999999999999998887 99999999999998 457899998877654314569999999999999999
Q ss_pred ceeEEEEEeCC-eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC--CccccccCCCceEeCCC
Q 009750 133 ANLIGYCCDGD-ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFDEN 209 (527)
Q Consensus 133 v~l~~~~~~~~-~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~--~ivH~Dlkp~NIll~~~ 209 (527)
|+|+|||.+.+ ..+||+|||++|+|.++|.......++|..|++|+.++|+||+|||... +||||||||+|||||++
T Consensus 134 v~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~ 213 (361)
T KOG1187|consen 134 VKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED 213 (361)
T ss_pred ccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC
Confidence 99999999998 5999999999999999998633328999999999999999999999976 59999999999999999
Q ss_pred CCceeecccCccccCC-CCcc----ccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccc
Q 009750 210 GDPRLSCFGLMKNSRD-GKSY----STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKF 284 (527)
Q Consensus 210 ~~~kl~DFG~a~~~~~-~~~~----~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~ 284 (527)
+++||+|||+|+.... .... .||.+|++||++..+..+.|+|||||||+|+||+||+.+........ ....
T Consensus 214 ~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~----~~~l 289 (361)
T KOG1187|consen 214 FNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRG----ELSL 289 (361)
T ss_pred CCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcc----cccH
Confidence 9999999999987664 3322 78999999999999999999999999999999999998765432111 1113
Q ss_pred hhhHHHHHhcCcchhhcccccC-CCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 285 NFGALDMIRGKNILHLMDSHLE-GNFSS-EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..|++..+....+.+++|+.+. ..++. .....+..++.+|++.+|.+||+|.+|++.|+.+..
T Consensus 290 ~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 290 VEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 4456667777789999999876 66664 577779999999999999999999999999966543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-54 Score=397.71 Aligned_cols=248 Identities=21% Similarity=0.251 Sum_probs=212.7
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCe-eeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE-RLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~lv~E~ 151 (527)
.++.||.|..|+||+++++. +++.+|+|++...... ..+++.+|++++++.+||+||.++|+|..+.. +.|+|||
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~---t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKP---TGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred hhhhcccCCCcEEEEEEEcC---CCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 67899999999999999998 8999999999654432 35789999999999999999999999999995 9999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEeCCCCCceeecccCccccCC--CCc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--GKS 228 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--~~~ 228 (527)
|++|+|..++. ..+++++...-+|+.+|++||.|||+ .+ ||||||||+|||++..|.+||||||.++.... ..+
T Consensus 160 MDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t 236 (364)
T KOG0581|consen 160 MDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT 236 (364)
T ss_pred cCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence 99999999997 44789999999999999999999996 66 99999999999999999999999999986544 368
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc---c
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH---L 305 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 305 (527)
++||..|||||.+.+..|+.++||||||++++|+.+|+.|++..... ...+..++... .
T Consensus 237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~------------------~~~~~~Ll~~Iv~~p 298 (364)
T KOG0581|consen 237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP------------------YLDIFELLCAIVDEP 298 (364)
T ss_pred ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC------------------CCCHHHHHHHHhcCC
Confidence 89999999999999999999999999999999999999998754100 11112222222 1
Q ss_pred CCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 306 EGNFSSE-EATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 306 ~~~~~~~-~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.+..|.. +++++++|+..||++||.+|||+.++++|-+-.
T Consensus 299 pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~ 339 (364)
T KOG0581|consen 299 PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIK 339 (364)
T ss_pred CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHh
Confidence 2334554 788999999999999999999999999986543
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-53 Score=397.50 Aligned_cols=251 Identities=20% Similarity=0.258 Sum_probs=209.4
Q ss_pred CCc-ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-------hHHHHHHHHHhhcCCCCccceeEEEEE
Q 009750 69 FSS-DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-------PKQFADEAWGVGKLRHKRLANLIGYCC 140 (527)
Q Consensus 69 ~~~-~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-------~~~~~~E~~~l~~l~H~nIv~l~~~~~ 140 (527)
|.+ +.+.+.||+|+||.|-+|..+. +|+.||||++++..... ...+.+|+++|++|+|||||+++++|+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~---tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~ 246 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKK---TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE 246 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcc---cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee
Confidence 444 4455589999999999999998 99999999998653222 224679999999999999999999999
Q ss_pred eCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC---CCceeecc
Q 009750 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCF 217 (527)
Q Consensus 141 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~---~~~kl~DF 217 (527)
..+..||||||++||+|.+.+. ..+.+.+...+.+++|++.||.|||++| |+||||||+|||+..+ ..+||+||
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred cCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEeccc
Confidence 9999999999999999999998 5677888999999999999999999999 9999999999999766 78999999
Q ss_pred cCccccCCC---CccccCCccCCcccccCCc---CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHH
Q 009750 218 GLMKNSRDG---KSYSTNLAYTPPEYLRNGR---VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 218 G~a~~~~~~---~~~~~t~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
|+|+..+++ .+.+|||.|.|||++.+.. +..++|+||+|||||.+|+|.+||...-.
T Consensus 324 GlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~----------------- 386 (475)
T KOG0615|consen 324 GLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT----------------- 386 (475)
T ss_pred chhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC-----------------
Confidence 999998754 5789999999999997654 33488999999999999999999975411
Q ss_pred HhcCcc-hhhcccc--cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 292 IRGKNI-LHLMDSH--LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 292 ~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.... .++.... ..+......+.+..+||.+||..||++|||+.|+|+|-|.
T Consensus 387 --~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~ 440 (475)
T KOG0615|consen 387 --DPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWF 440 (475)
T ss_pred --CccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhh
Confidence 1111 1121111 1122345678889999999999999999999999999775
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-52 Score=405.51 Aligned_cols=251 Identities=29% Similarity=0.429 Sum_probs=214.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceE-EEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCC-eeeEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRW-IAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD-ERLLVA 149 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~-vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lv~ 149 (527)
+...+|.|+||+||+|.+. |+. ||||++....... .+.|.+|+.+|.+++|||||+++|+|.+.. .++|||
T Consensus 45 ~~~~iG~G~~g~V~~~~~~-----g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWR-----GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hhhhcccCCceeEEEEEeC-----CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 3445899999999999996 344 9999998765433 458999999999999999999999999887 799999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-CceeecccCccccCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRD--- 225 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~~--- 225 (527)
||+++|+|..++.......+++..++.|+.+|++||.|||++++||||||||+|||++.++ ++||+|||+++....
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~ 199 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKT 199 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccc
Confidence 9999999999998544688999999999999999999999997689999999999999998 999999999976543
Q ss_pred -CCccccCCccCCccccc--CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 -GKSYSTNLAYTPPEYLR--NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 -~~~~~~t~~y~aPE~~~--~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.....||+.|||||++. ...|+.|+|||||||+||||+||+.||...... .....+..
T Consensus 200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-------------------~~~~~v~~ 260 (362)
T KOG0192|consen 200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-------------------QVASAVVV 260 (362)
T ss_pred cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-------------------HHHHHHHh
Confidence 23368899999999999 568999999999999999999999999765321 11222333
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
...+..++..+++.+..|+.+||+.||..||++.+++..|+.+...
T Consensus 261 ~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 261 GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 4455566666888899999999999999999999999999987653
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-52 Score=409.45 Aligned_cols=246 Identities=21% Similarity=0.224 Sum_probs=214.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+...+.||+|||+.||++++.. +|..||+|++.+... ...+.+.+||+|.+.|+|||||+++++|++.+++|||
T Consensus 20 Y~~g~~LGkGgFA~cYe~~~~~---tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 20 YKRGRFLGKGGFARCYEARDLD---TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred eeeeeeeccCcceEEEEEEEcC---CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 4455678999999999999977 899999999987543 3356799999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC---
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--- 225 (527)
.|+|++++|..+++ ....+++.+++.+++||+.||.|||+.+ |||||||..|+||+++.++||+|||||.....
T Consensus 97 LELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 97 LELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCccc
Confidence 99999999999997 6788999999999999999999999999 99999999999999999999999999987653
Q ss_pred -CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 226 -GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 226 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
..+.+|||.|+|||++.....+..+||||+|||||.||+|++||...+. ......+...
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v-------------------kety~~Ik~~- 233 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV-------------------KETYNKIKLN- 233 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH-------------------HHHHHHHHhc-
Confidence 3578999999999999988999999999999999999999999975421 0111112111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.-.+|...+..+.+||.++|+.||.+|||+++||.|-..
T Consensus 234 -~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 234 -EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred -CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 112456777889999999999999999999999998665
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-52 Score=389.18 Aligned_cols=248 Identities=20% Similarity=0.253 Sum_probs=207.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
++.+..+||.|+||+||+|++++ ++..||||.+.+.. ....+.+..|+.+|+.|+|||||++++++..++.+|||
T Consensus 11 ~y~~~~~iG~GsfavVykg~h~~---~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 11 DYELSREIGSGSFAVVYKGRHKK---SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cceehhhccCcceEEEEEeEecc---CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 44466779999999999999998 78999999998774 23356689999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC------CCceeecccCccc
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN------GDPRLSCFGLMKN 222 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~------~~~kl~DFG~a~~ 222 (527)
||||.||+|..+++ ..+.+++..++.++.||+.||++||+++ ||||||||+||||+.. -.+||+|||+|+.
T Consensus 88 MEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 99999999999998 5678999999999999999999999999 9999999999999765 4589999999998
Q ss_pred cCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 223 SRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 223 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
.... .+.+|++.|||||++..+.|+.|+|+||+|+|||+|++|+.||......+ .+.. .+
T Consensus 165 L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e--------------L~~~---~~ 227 (429)
T KOG0595|consen 165 LQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKE--------------LLLY---IK 227 (429)
T ss_pred CCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHH--------------HHHH---Hh
Confidence 8765 47799999999999999999999999999999999999999997432111 1100 00
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.........+...+..+.+|+...+..+|.+|.+..+...+.
T Consensus 228 -k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 228 -KGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred -ccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 011122233444555667888899999999998888876653
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-52 Score=373.14 Aligned_cols=247 Identities=19% Similarity=0.265 Sum_probs=207.1
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEE-EEeCC-eee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGY-CCDGD-ERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~-~~~~~-~~~ 146 (527)
++.|+++||+|+||+||++.... +|+.||.|.+.-..... ...+..|+.+|++|+|||||+++++ +.++. -++
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~---~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLL---DGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred HHHHHHHHcCCcchheEEeeecc---CcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 34588899999999999999988 89999999998543333 3468999999999999999999994 33444 489
Q ss_pred EEEEecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhhC---CCccccccCCCceEeCCCCCceeecccCcc
Q 009750 147 LVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSE---GRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~~---~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
||||||.+|+|...+++ .....+++..+++++.|++.||..+|++ +.|+||||||.||+|+.+|.+||+|||+++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 99999999999999975 3456799999999999999999999993 349999999999999999999999999999
Q ss_pred ccCCCC----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 222 NSRDGK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 222 ~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
...... +++|||.||+||.+.+.+|+.+|||||+||++|||+.-++||.+.. .
T Consensus 177 ~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-----------------------~ 233 (375)
T KOG0591|consen 177 FLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-----------------------L 233 (375)
T ss_pred HhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc-----------------------H
Confidence 887654 5689999999999999999999999999999999999999998752 1
Q ss_pred hhhcccccCCC---CC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 298 LHLMDSHLEGN---FS-SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 298 ~~~~~~~~~~~---~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..+-...-.++ .| .-.+..+..||..|+..||..||+...++..+.
T Consensus 234 ~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 234 LSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred HHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 11111111222 33 567889999999999999999999766655544
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-52 Score=371.86 Aligned_cols=264 Identities=22% Similarity=0.310 Sum_probs=208.1
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+..++++|+|+||.||+|++++ +|+.||||++..+.... .+-.+|||++|++|+|+|+|.|+++|.....++||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~---TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKD---TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred HHhhhhccccCcceEEEEeccCC---cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 35578999999999999999999 99999999997654322 35689999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC-C-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-G- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~-~- 226 (527)
||||+. ++.+-|.+ ....++...+.+++.|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+.... +
T Consensus 80 FE~~dh-TvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 80 FEYCDH-TVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred eeecch-HHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence 999988 45455543 5667899999999999999999999999 99999999999999999999999999998763 2
Q ss_pred --CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccc----hhhHHHHHhcCc-ch
Q 009750 227 --KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKF----NFGALDMIRGKN-IL 298 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~ 298 (527)
+.++.|.+|+|||.+.| .+|+..+||||+||++.||++|.+.||+.++.+....-... .-.-...+.... +.
T Consensus 157 ~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~ 236 (396)
T KOG0593|consen 157 NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFH 236 (396)
T ss_pred hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCcee
Confidence 34678999999999988 67999999999999999999999999998765321110000 000011111111 11
Q ss_pred hhcccc------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 299 HLMDSH------LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 299 ~~~~~~------~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.+.-+. +...+ +..+..+.+|+.+||+.||.+|++.++++.|
T Consensus 237 Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 237 GVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred eeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 110000 01111 2335568899999999999999999999987
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-51 Score=380.79 Aligned_cols=244 Identities=22% Similarity=0.274 Sum_probs=207.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
..+++.||+|+||.||.++.++ +++.+|+|++++.... ..+....|..||.+++||.||+++-.|.+.+++|||
T Consensus 27 F~~lkviGkG~fGkV~~Vrk~d---t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 27 FEILKVIGKGSFGKVFQVRKKD---TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred eeeeeeeeccCCceEEEEEEcc---cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 3478889999999999999997 9999999999876543 345789999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC---
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--- 225 (527)
+||+.||.|..+|+ +.+.+++..+..++.+|+.||.|||+++ ||||||||+|||||.+|+++|+|||+++....
T Consensus 104 ld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence 99999999999997 5688999999999999999999999999 99999999999999999999999999985332
Q ss_pred -CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 226 -GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 226 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
..+++||+.|||||++.+..|+..+|+||+||++|||++|.+||.+.+...+ ...+....
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~-------------------~~~I~~~k 241 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKM-------------------YDKILKGK 241 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHH-------------------HHHHhcCc
Confidence 3467999999999999999999999999999999999999999976542211 11111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCC----CHHHHHHH
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERP----NTKDLVST 341 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rp----t~~~vl~~ 341 (527)
....+.-.+....+|+.++|..||++|. .+.++-+|
T Consensus 242 -~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 242 -LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred -CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 1123334677889999999999999996 45554444
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-50 Score=391.90 Aligned_cols=248 Identities=27% Similarity=0.437 Sum_probs=218.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
++++||+|-||.||.|.+... ..||||.++... ...+.|.+|+.+|++|+|+|||+++|+|..++.++||||||+
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~----~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGS----TKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHhcCCccceEEEEEEcCC----CcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 778999999999999999743 359999998763 345789999999999999999999999999889999999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCccc---
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS--- 230 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~--- 230 (527)
.|+|.++|+......+...+.+.++.|||+|++||++++ +|||||..+||||+++..+||+|||+|+...+.....
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~ 363 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG 363 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCC
Confidence 999999998766788999999999999999999999999 9999999999999999999999999999655443221
Q ss_pred --cCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 231 --TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 231 --~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
-...|.|||.+..+.++.|||||||||+||||+| |+.|+++.. ...+.+.+....+.
T Consensus 364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms--------------------n~ev~~~le~GyRl 423 (468)
T KOG0197|consen 364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS--------------------NEEVLELLERGYRL 423 (468)
T ss_pred CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC--------------------HHHHHHHHhccCcC
Confidence 1467999999999999999999999999999999 777766532 33455566677777
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+.|..++..+.+|+..||+.+|++|||++.+...|+.+..
T Consensus 424 p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 424 PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 8889999999999999999999999999999988887653
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-49 Score=360.51 Aligned_cols=291 Identities=18% Similarity=0.202 Sum_probs=224.4
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeC
Q 009750 65 ATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142 (527)
Q Consensus 65 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 142 (527)
.+++.+++.++..|++|+||.||+|+++. +++.||+|+++.+... -.-.-.|||.+|.+++|||||.+..+....
T Consensus 71 gCrsv~efe~lnrI~EGtyGiVYRakdk~---t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~ 147 (419)
T KOG0663|consen 71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKK---TDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS 147 (419)
T ss_pred CcccHHHHHHHhhcccCcceeEEEeccCC---cceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc
Confidence 44455566688899999999999999998 8899999999876432 234678999999999999999999987654
Q ss_pred --CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCc
Q 009750 143 --DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 143 --~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
+.+|||||||+. +|..++.. -.+++...++..++.|+++||+|||.+. |+||||||+|+|+++.|.+||+|||+|
T Consensus 148 ~~d~iy~VMe~~Eh-DLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLA 224 (419)
T KOG0663|consen 148 NMDKIYIVMEYVEH-DLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLA 224 (419)
T ss_pred ccceeeeeHHHHHh-hHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchh
Confidence 569999999998 89999975 4478999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC----CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccc----------cccccch
Q 009750 221 KNSRDG----KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWN----------TVPIKFN 285 (527)
Q Consensus 221 ~~~~~~----~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~----------~~~~~~~ 285 (527)
+..+.. +..+.|.+|+|||.+++.. |+++.|+||+|||+.||+++++.|++....... ...++..
T Consensus 225 R~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 225 REYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred hhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC
Confidence 987654 4557799999999999865 999999999999999999999999987643211 0000000
Q ss_pred hhHHHHHhcCcchhhcccccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCCCCCcccccCCCC
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNFSSE-EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPR 361 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~~~~~~~~~~~~~ 361 (527)
+........-.+.......++..|... .+....+|+..+|..||.+|.|+++.|+|=.....+.+.+...+...|.
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~P~ 381 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTWPA 381 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCCcc
Confidence 000011111111222222233333332 4577889999999999999999999999977665444444444444443
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-50 Score=380.93 Aligned_cols=266 Identities=19% Similarity=0.259 Sum_probs=213.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHH--HHHHHHHhhcCC-CCccceeEEEEEeCC-eee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ--FADEAWGVGKLR-HKRLANLIGYCCDGD-ERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~--~~~E~~~l~~l~-H~nIv~l~~~~~~~~-~~~ 146 (527)
.|.++++||.|+||.||+|+.+. ++..||||++++... ..++ =.||+..|++|+ |||||+|.+++.+.+ .++
T Consensus 11 RY~~i~klGDGTfGsV~la~~~~---~~~~VAIK~MK~Kf~-s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 11 RYTVIRKLGDGTFGSVYLAKSKE---TGELVAIKKMKKKFY-SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHhcCCcceeEEEeeecC---CCceeeHHHHHhhhc-cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 46688999999999999999988 888999999987653 3444 468999999998 999999999999888 999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+|||||+. +|+++++++ ...|++..++.|+.||++||+|+|.+| +.||||||+|||+..+..+||+|||+|+.....
T Consensus 87 fVfE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSK 163 (538)
T ss_pred eeHHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccC
Confidence 99999976 999999874 788999999999999999999999999 999999999999999999999999999986654
Q ss_pred ---CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccc-------cccccchhhH-HHHHhc
Q 009750 227 ---KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWN-------TVPIKFNFGA-LDMIRG 294 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~-------~~~~~~~~~~-~~~~~~ 294 (527)
+.++.|.+|+|||+++. +.|+.+.|||++|||++|+.+-++.|+|.++.+.. ..+....+.. ......
T Consensus 164 pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~ 243 (538)
T KOG0661|consen 164 PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA 243 (538)
T ss_pred CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence 56788999999999865 56899999999999999999999999998754221 0000000000 000000
Q ss_pred C--cchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 295 K--NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 295 ~--~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
. .+.......+..-++ ..+.++.+||.+||..||.+|||+.++++|-..
T Consensus 244 mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~pff 294 (538)
T KOG0661|consen 244 MNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQHPFF 294 (538)
T ss_pred hccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcCccc
Confidence 0 011111111111122 367889999999999999999999999998654
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-49 Score=349.30 Aligned_cols=267 Identities=20% Similarity=0.229 Sum_probs=211.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+..++.+|+|.||.||+|++.. +|+.||||+++.....+ .....|||+.|+.++|+||+.++++|...+.+.||+
T Consensus 4 Y~~~~~lGEG~~gvVyka~d~~---t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 4 YEKLEKLGEGTYGVVYKARDTE---TGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred hhhhhhhcCcceEEEEEEEecC---CCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 4467788999999999999988 89999999998764332 356899999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||++. +|+..+++ ....++..++..|+.++++||+|||++. |+||||||.|+|++.+|.+||+|||+|+......
T Consensus 81 Efm~t-dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred Eeccc-cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 99987 89999975 5678999999999999999999999999 9999999999999999999999999999876432
Q ss_pred --ccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc-------ccchhhHHHHHhcCcc
Q 009750 228 --SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP-------IKFNFGALDMIRGKNI 297 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 297 (527)
..+.|.+|+|||.+.|. .|+..+||||.|||+.||+-|.+.|++.++.+....- ....|..+..+.....
T Consensus 158 ~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~ 237 (318)
T KOG0659|consen 158 QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVK 237 (318)
T ss_pred cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHH
Confidence 23679999999999875 4999999999999999999999999988665321110 0000000000111111
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
............-+..+.++.+|+.++|..||.+|+|+.++++|-..
T Consensus 238 ~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf 284 (318)
T KOG0659|consen 238 IQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYF 284 (318)
T ss_pred HhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhh
Confidence 11111111111223455667899999999999999999999988554
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-49 Score=377.48 Aligned_cols=266 Identities=22% Similarity=0.245 Sum_probs=208.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLL 147 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~l 147 (527)
+..+.+||+|+||.||+|++.. +|+.||+|+++.+.. .......+||.||++|+||||++|.+...+. +.+||
T Consensus 119 feki~kIGeGTyg~VYkAr~~~---tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLE---TGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHHHHHhcCcchhheeEeeecc---cCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 5578899999999999999998 999999999987753 3456788999999999999999999999876 68999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
|||||++ +|..++.. ..-.|++.++..++.||+.||+|||+++ |+|||||.+|||||++|.+||+|||||++....
T Consensus 196 VFeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 9999998 89999853 4557999999999999999999999999 999999999999999999999999999965543
Q ss_pred ----CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhh-HHHHHhcCcch--
Q 009750 227 ----KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG-ALDMIRGKNIL-- 298 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-- 298 (527)
+..+.|.+|+|||.++|.. |+.++|+||.||||.||++|++.|++..+.+....-+...-. ....+....+.
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~ 352 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHA 352 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcc
Confidence 3446699999999999864 999999999999999999999999988654321110000000 00000000000
Q ss_pred hhccc------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 299 HLMDS------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 299 ~~~~~------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..+.. .+... -...+....+|+..+|..||.+|.|+.++|.+=..
T Consensus 353 ~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 353 TIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred cccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 00000 00000 01224567899999999999999999999987444
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-49 Score=356.30 Aligned_cols=234 Identities=20% Similarity=0.234 Sum_probs=206.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCCh---HHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~---~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
..++..||.|+||.|.+++.+. +|..+|+|++++...-.. +...+|..+|+.+.||.++++++.|.+...++||
T Consensus 46 fe~~~tlGtGSFGrV~LVr~k~---~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 46 FERLKTLGTGSFGRVHLVREKH---SGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhheeeeccCccceEEEEEEcc---CCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 3378889999999999999998 899999999987654443 4578999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-C
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-K 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-~ 227 (527)
|||++||.|..+|+ +.+++++..++.++.||+.||+|||+++ |++|||||+|||||.+|++||+|||+|+..... -
T Consensus 123 meyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~ 199 (355)
T KOG0616|consen 123 MEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW 199 (355)
T ss_pred EeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence 99999999999998 6788999999999999999999999999 999999999999999999999999999886654 5
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
+.+|||.|+|||+++..+++.++|+|||||++|||+.|.+||...... ....+|+... -
T Consensus 200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~-------------------~iY~KI~~~~--v 258 (355)
T KOG0616|consen 200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI-------------------QIYEKILEGK--V 258 (355)
T ss_pred EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH-------------------HHHHHHHhCc--c
Confidence 779999999999999999999999999999999999999999754210 1112233222 2
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCC
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRER 332 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~R 332 (527)
.+|+-.+..+.+|+.++|+.|-.+|
T Consensus 259 ~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 259 KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 3778888899999999999999999
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-48 Score=376.07 Aligned_cols=244 Identities=21% Similarity=0.267 Sum_probs=210.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+.||.|+|++|++|+.+. +++.+|||++.+.-.. ..+.+.+|-++|.+| .||.||+|+-.|.+...+|+|+
T Consensus 77 Fg~~lGeGSYStV~~A~~~~---t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL 153 (604)
T KOG0592|consen 77 FGKILGEGSYSTVVLAREKA---TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL 153 (604)
T ss_pred hhheeccccceeEEEeeecC---CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence 56677999999999999998 8999999999876432 235688999999999 8999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++|+|.++|+ ..+.|++..++.++.+|+.||+|||++| ||||||||+|||||++|++||+|||.|+.....
T Consensus 154 e~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 154 EYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred EecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence 9999999999998 5688999999999999999999999999 999999999999999999999999998864321
Q ss_pred --------------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHH
Q 009750 227 --------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 227 --------------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
.+++||-.|.+||++..+..+..+|+|+||||||.|+.|.+||.+.+..
T Consensus 231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----------------- 293 (604)
T KOG0592|consen 231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----------------- 293 (604)
T ss_pred ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH-----------------
Confidence 3478999999999999999999999999999999999999999764311
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
-.+.+|+. +.-.|+...++.+.+||.++|..||.+|+|+.+|-+|...
T Consensus 294 --liFqkI~~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF 341 (604)
T KOG0592|consen 294 --LIFQKIQA--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFF 341 (604)
T ss_pred --HHHHHHHH--hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCccc
Confidence 01122221 1223555666789999999999999999999999988643
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-49 Score=371.36 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=208.2
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCC--eeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD--ERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lv~E 150 (527)
...+.||+|+||+||++.+.+ +|...|||.+........+.+.+|+.+|++|+|||||+++|...... .++|+||
T Consensus 20 ~~~~~lG~Gs~G~V~l~~~~~---~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 20 SKGKLLGRGSFGSVYLATNKK---TGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred hhhccccCccceEEEEEEecC---CCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 356678999999999999987 68899999997664333567999999999999999999999855444 6999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-CCCceeecccCccccCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLMKNSRD---- 225 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~~---- 225 (527)
|+++|+|.+++..... .+++..++.+.+||++||.|||+++ +|||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence 9999999999985443 7999999999999999999999999 999999999999999 79999999999886552
Q ss_pred ---CCccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCC-CccccccccccchhhHHHHHhcCcchhh
Q 009750 226 ---GKSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSH-DMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
.....||+.|||||++.++. ...++|||||||++.||+||++||... +. ...+..+
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~-------------------~~~~~~i 235 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE-------------------AEALLLI 235 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch-------------------HHHHHHH
Confidence 23568999999999998643 445999999999999999999987542 00 0111122
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
......+.+|...+....+++.+|+..||++|||++++|.|....+..
T Consensus 236 g~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 236 GREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred hccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 222222356677888899999999999999999999999998765543
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-48 Score=377.74 Aligned_cols=242 Identities=21% Similarity=0.273 Sum_probs=213.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+...||+|+||+||||+.+. +.+.||||.+.+..... .+.+.+|++|++.|+|||||.++++|+...++++|.
T Consensus 4 yhv~e~iG~Gsfg~VYKgrrK~---t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 4 YHVYEMIGEGSFGRVYKGRRKY---TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred hhHHHHhcCCccceeeeccccc---ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 3466778999999999999998 88999999998876544 457999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+.| +|..+|. ..+.++++.+..|+.++++||.|||+.+ |+|||+||.|||++..|++|+||||+|+.....+
T Consensus 81 e~a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~v 156 (808)
T KOG0597|consen 81 EYAVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSV 156 (808)
T ss_pred hhhhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCcee
Confidence 99987 9999997 6788999999999999999999999999 9999999999999999999999999999877654
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
+..|||.|||||++.+++|+..+|+||+|||||||++|++||... .+.+++..++
T Consensus 157 ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----------------------si~~Lv~~I~ 213 (808)
T KOG0597|consen 157 LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----------------------SITQLVKSIL 213 (808)
T ss_pred eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----------------------HHHHHHHHHh
Confidence 457899999999999999999999999999999999999998542 1222222222
Q ss_pred C--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 306 E--GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 306 ~--~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
. ..+|...+..+..|+..+|.+||.+|.|-.+++.|-.
T Consensus 214 ~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF 253 (808)
T KOG0597|consen 214 KDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPF 253 (808)
T ss_pred cCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChH
Confidence 2 2356688899999999999999999999999998743
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-48 Score=379.32 Aligned_cols=246 Identities=20% Similarity=0.245 Sum_probs=216.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+..-||.|+.|.|-.|++.. +|+.+|||++.+..... ...+.+||.||+.|.||||+++|++++...++|+
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~---TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAE---TGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred ceeccccccCCCCceehhhhccc---ccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 44456678999999999999988 99999999998764322 3468999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
|.||++||.|++++. .++++++.++.+++.||+.|+.|+|..+ |+||||||+|+|||.++.+||+|||+|.....+
T Consensus 90 vlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 999999999999998 7789999999999999999999999999 999999999999999999999999999876655
Q ss_pred --CccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
.+.+|+|.|.+||++.|.+| +.++||||.|||||.||||+.||.. +++..++..
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----------------------dNir~LLlK 223 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----------------------DNIRVLLLK 223 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----------------------ccHHHHHHH
Confidence 47799999999999999998 5689999999999999999999963 333334433
Q ss_pred ccCCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 304 HLEGN--FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 304 ~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
..++. .|...+.++++|+.+||..||++|.|+++|++|.+-.
T Consensus 224 V~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~ 267 (786)
T KOG0588|consen 224 VQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLS 267 (786)
T ss_pred HHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhh
Confidence 33333 4677889999999999999999999999999997643
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-48 Score=392.74 Aligned_cols=253 Identities=26% Similarity=0.365 Sum_probs=215.7
Q ss_pred ccccCCCCCCCeEEEEEecCCC--CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+||+|.||.||+|...... +....||||.++..... ...+|++|+++|..|+|||||+|+|+|.+++.++||+|
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFE 569 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFE 569 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEE
Confidence 6778999999999999887653 35678999999987655 46789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcC------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 151 YMPNDTLAKHLFHWE------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
||..|||.++|+... ..+|+..+.+.|+.|||.|+.||-++. +|||||-.+|+||.++..|||+|||
T Consensus 570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIsDfG 648 (774)
T KOG1026|consen 570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKISDFG 648 (774)
T ss_pred ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEecccc
Confidence 999999999997531 223889999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCCCc------cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHH
Q 009750 219 LMKNSRDGKS------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 219 ~a~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
+++......- ..-.++|||||.|+.++|+++||||||||||||++| |+.|+.+..
T Consensus 649 LsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS------------------ 710 (774)
T KOG1026|consen 649 LSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS------------------ 710 (774)
T ss_pred cchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc------------------
Confidence 9987554322 223578999999999999999999999999999999 777876542
Q ss_pred HhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 292 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.+.+.+.+....-...|.+++..+..|+..||+.+|++||+++||...|+....
T Consensus 711 --n~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 711 --NQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred --hHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 222222222222255788899999999999999999999999999999988654
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=371.42 Aligned_cols=250 Identities=19% Similarity=0.226 Sum_probs=210.1
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC----CC-CChHHHHHHHHHhhcCC-CCccceeEEEEEeCC
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH----AW-PDPKQFADEAWGVGKLR-HKRLANLIGYCCDGD 143 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~ 143 (527)
..+.+...||+|+||.|+.|.... ++..||||++.+. .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 17 g~y~~~~~lG~GsfgkV~~a~~~~---t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 17 GKYELGRTLGSGSFGKVKLAKHRL---TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred CceeeeeeecCCCCeeEEEeeecc---CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 345577789999999999999987 7799999987764 11 22456789999999998 999999999999999
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC-CCceeecccCccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKN 222 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~~ 222 (527)
.+++||||+.||+|.+++. ..+++.+..+..++.||++|++|||+.| |+||||||+|||+|.+ +++||+|||++..
T Consensus 94 ~~~ivmEy~~gGdL~~~i~--~~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIV--NKGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred eEEEEEEecCCccHHHHHH--HcCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 9999999999999999998 4688999999999999999999999999 9999999999999999 9999999999987
Q ss_pred cC-C---CCccccCCccCCcccccCCc-CC-CCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 223 SR-D---GKSYSTNLAYTPPEYLRNGR-VT-PESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 223 ~~-~---~~~~~~t~~y~aPE~~~~~~-~~-~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
.. . ..+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||...+.. ..
T Consensus 171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~--------------~l----- 231 (370)
T KOG0583|consen 171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP--------------NL----- 231 (370)
T ss_pred cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH--------------HH-----
Confidence 72 2 35779999999999999877 75 6899999999999999999999653211 00
Q ss_pred chhhcccccCCCCCHHH-HHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 297 ILHLMDSHLEGNFSSEE-ATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 297 ~~~~~~~~~~~~~~~~~-~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
...+.... -.+|... +.++.+|+.+||..||.+|+|+.+++.|-+...
T Consensus 232 ~~ki~~~~--~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 232 YRKIRKGE--FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHhcCC--ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 11111111 1234444 788999999999999999999999997766543
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=372.80 Aligned_cols=246 Identities=18% Similarity=0.287 Sum_probs=212.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+....+||+|+.|.||.+.... +++.||||++........+-+.+|+.+|+..+|+|||.+++-|...+.+++||||
T Consensus 275 y~~~~kigqgaSG~vy~A~~~~---~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 275 YTDFKKIGQGATGGVYVARKIS---TKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hcchhhhccccccceeeeeecc---CCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 3345678999999999999988 8889999999988766677799999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----C
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----K 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~ 227 (527)
|+||+|.+.+. ...+++.++..|+++++.||+|||.++ |+|||||.+|||++.+|.+||+|||++...... .
T Consensus 352 m~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 352 MEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred cCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 99999999994 456999999999999999999999999 999999999999999999999999998776544 4
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc-ccC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS-HLE 306 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 306 (527)
+.+|||+|||||++....|++++||||||++++||+-|++||...+.. .+.. .+... ...
T Consensus 428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl-----------rAly--------LIa~ng~P~ 488 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-----------RALY--------LIATNGTPK 488 (550)
T ss_pred cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH-----------HHHH--------HHhhcCCCC
Confidence 678999999999999999999999999999999999999998643211 0111 11111 122
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...+...+..+.+|+.+||+.|+.+|+++.|+|+|-.
T Consensus 489 lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpF 525 (550)
T KOG0578|consen 489 LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPF 525 (550)
T ss_pred cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChh
Confidence 2345677889999999999999999999999999843
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=333.66 Aligned_cols=259 Identities=22% Similarity=0.274 Sum_probs=223.0
Q ss_pred CccccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcC
Q 009750 51 APAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL 127 (527)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l 127 (527)
.+....|+++++. +.+.||+|.||.||.|+.+. ++-.||+|++-++.. ....++.+|++|-+.|
T Consensus 13 ~~~~~~~~l~dfe----------igr~LgkgkFG~vYlarekk---s~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L 79 (281)
T KOG0580|consen 13 SRATKTWTLDDFE----------IGRPLGKGKFGNVYLAREKK---SLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL 79 (281)
T ss_pred cccccccchhhcc----------ccccccCCccccEeEeeecc---CCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc
Confidence 4445566666443 66778999999999999998 888999999987642 2356899999999999
Q ss_pred CCCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC
Q 009750 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (527)
Q Consensus 128 ~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~ 207 (527)
+||||++++++|.+...+||++||.++|+|+..|+......+++.....++.|++.||.|+|.++ ||||||||+|+|++
T Consensus 80 ~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg 158 (281)
T KOG0580|consen 80 RHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLG 158 (281)
T ss_pred CCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccC
Confidence 99999999999999999999999999999999999777788999999999999999999999999 99999999999999
Q ss_pred CCCCceeecccCccccCCC--CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccch
Q 009750 208 ENGDPRLSCFGLMKNSRDG--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 208 ~~~~~kl~DFG~a~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 285 (527)
.++.+||+|||-+...... .+.+||.-|.+||.+.+..++..+|+|++|++.||++.|.+||....
T Consensus 159 ~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~------------ 226 (281)
T KOG0580|consen 159 SAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS------------ 226 (281)
T ss_pred CCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh------------
Confidence 9999999999998765433 57799999999999999999999999999999999999999996432
Q ss_pred hhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......+|... +-.+|...+..+.+||.+||..+|.+|.+..+++.|-+-
T Consensus 227 -------~~etYkrI~k~--~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 227 -------HSETYKRIRKV--DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred -------hHHHHHHHHHc--cccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence 12223333322 223567778889999999999999999999999998654
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=362.28 Aligned_cols=235 Identities=23% Similarity=0.354 Sum_probs=204.5
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
+.=||.|+.|-||+|++. ++.||||+++.-. ..+|+=|++|+||||+.+.|+|.....+|||||||..
T Consensus 129 LeWlGSGaQGAVF~Grl~-----netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~ 196 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-----NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ 196 (904)
T ss_pred hhhhccCcccceeeeecc-----CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecccc
Confidence 445799999999999995 4669999986433 3468889999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---Ccccc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KSYST 231 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---~~~~~ 231 (527)
|-|.+.|+ ....++......|..+||.|+.|||.+. |||||||.-||||+.+..+||+|||-++...+. .++.|
T Consensus 197 GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaG 273 (904)
T KOG4721|consen 197 GQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAG 273 (904)
T ss_pred ccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhh
Confidence 99999998 5677889999999999999999999998 999999999999999999999999999876554 46789
Q ss_pred CCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCc--cccccccccchhhHHHHHhcCcchhhcccccCCCC
Q 009750 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDM--VVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309 (527)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (527)
|..|||||++.+.+.+.|+|||||||||||||||..|+..-+. ..| .+-...+....
T Consensus 274 TVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw---------------------GVGsNsL~Lpv 332 (904)
T KOG4721|consen 274 TVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW---------------------GVGSNSLHLPV 332 (904)
T ss_pred hHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE---------------------eccCCcccccC
Confidence 9999999999999999999999999999999999999854322 112 11122334456
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 310 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 310 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
|..++..+.-|+++||+..|..||++.+++.||.-.
T Consensus 333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 788889999999999999999999999999999754
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-47 Score=364.73 Aligned_cols=247 Identities=19% Similarity=0.168 Sum_probs=206.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
+..++..||+|+||.||+|+-++ +|.++|+|++++..... .+.+..|-.+|...++|+||+|+-.|.+.+++||
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~---Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKD---TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred cchhheeeccccceeEEEEEEcc---CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 34478899999999999999998 99999999999875433 4568899999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC--
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~-- 225 (527)
||||++||++..+|. ..+.|++..+..++.+++.|+..||..| +|||||||+|+|||..|++||+||||+.-...
T Consensus 219 iMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 999999999999997 6788999999999999999999999999 99999999999999999999999999742100
Q ss_pred -----------------------C--------------------------CccccCCccCCcccccCCcCCCCcccchhh
Q 009750 226 -----------------------G--------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFG 256 (527)
Q Consensus 226 -----------------------~--------------------------~~~~~t~~y~aPE~~~~~~~~~~~DvwslG 256 (527)
. .+.+|||-|||||++.+..|+..+|+||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0 014689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc--cCCCCCHHHHHHHHHHHHHhcccCCCCCC-
Q 009750 257 TVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH--LEGNFSSEEATVVFDLASRCLQYEPRERP- 333 (527)
Q Consensus 257 vvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rp- 333 (527)
||+||||.|.+||.+.+... ....++.-. +..+-....+.++.+||.+||. ||.+|.
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~-------------------T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQE-------------------TYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHH-------------------HHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 99999999999998764321 112222211 2211223345789999999999 999996
Q ss_pred --CHHHHHHHhc
Q 009750 334 --NTKDLVSTLA 343 (527)
Q Consensus 334 --t~~~vl~~L~ 343 (527)
.++||-+|-.
T Consensus 436 ~~G~~EIK~HPf 447 (550)
T KOG0605|consen 436 SKGAEEIKKHPF 447 (550)
T ss_pred cccHHHHhcCCc
Confidence 4777777654
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-47 Score=382.04 Aligned_cols=361 Identities=20% Similarity=0.244 Sum_probs=281.1
Q ss_pred ccCHHHHHHHhcCCCc------ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCC
Q 009750 56 EFSLADLRAATNNFSS------DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLR 128 (527)
Q Consensus 56 ~~~~~~~~~~~~~~~~------~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~ 128 (527)
.++++|--++...|.. -.|-+.||.|.||.||+|+++........||||.++....+ ...+|+.|+.||.+++
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 3455554444444433 22344789999999999999987666788999999876433 3457999999999999
Q ss_pred CCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC
Q 009750 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE 208 (527)
Q Consensus 129 H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~ 208 (527)
||||++|.|+......++||.|||+||+|..+|+.+. +.+++.+...++++|+.|+.||-+.+ +|||||..+|||++.
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNs 766 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNS 766 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeecc
Confidence 9999999999999999999999999999999998744 56999999999999999999999999 999999999999999
Q ss_pred CCCceeecccCccccCCCCc-ccc------CCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccc
Q 009750 209 NGDPRLSCFGLMKNSRDGKS-YST------NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTV 280 (527)
Q Consensus 209 ~~~~kl~DFG~a~~~~~~~~-~~~------t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~ 280 (527)
+...||+|||+++...++.. ... ..+|.|||.+...+++.+||||||||||||.++ |..|+..
T Consensus 767 nLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd--------- 837 (996)
T KOG0196|consen 767 NLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD--------- 837 (996)
T ss_pred ceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc---------
Confidence 99999999999998766542 212 367999999999999999999999999999887 8888643
Q ss_pred cccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCCCCCcccccCCC
Q 009750 281 PIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 360 (527)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~~~~~~~~~~~~ 360 (527)
+.+..+.+.+....+.+.|.+++..+.+|+..||++|..+||.+.+|+.+|.++...|..........+
T Consensus 838 -----------mSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~ 906 (996)
T KOG0196|consen 838 -----------MSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESP 906 (996)
T ss_pred -----------cchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCC
Confidence 224445556666777778889999999999999999999999999999999998877765443333322
Q ss_pred CCCCCCCCCCCCCCCCCCcccccchHHHhhhhhhcccCCCccccchhhhHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHH
Q 009750 361 RHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAF-REKEFKTAVD 439 (527)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~A~~ 439 (527)
++..+ -...+.++...-.++.+|.+.+.+.+|+++|..+....-+...++ .++.+...|..+. ..++.--.|.
T Consensus 907 r~s~~-----lld~~~~~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~V~q~-s~eDl~~~Gitl~GhqkkIl~SIq 980 (996)
T KOG0196|consen 907 RPSQP-----LLDRSGSDFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSFEDVAQM-SAEDLLRLGITLAGHQKKILSSIQ 980 (996)
T ss_pred CCccc-----ccCCCCCCCcccCCHHHHHHHhhhhHHHHHHHhcCcccHHHHHhh-hHHHHHhhceeecchhHHHHHHHH
Confidence 21111 111223334455579999999999999999988776655555443 4666777776642 3333444444
Q ss_pred HHHHh
Q 009750 440 CYSQF 444 (527)
Q Consensus 440 ~~~~a 444 (527)
.++.-
T Consensus 981 ~m~~q 985 (996)
T KOG0196|consen 981 AMRAQ 985 (996)
T ss_pred HHHHH
Confidence 44433
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-46 Score=351.82 Aligned_cols=261 Identities=19% Similarity=0.234 Sum_probs=210.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
-+.|.+..+||.|..++||+|+... .+.+||||++..+...+ .+.+.+|+..|+.++||||++++..|..+..+|+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p---~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIP---TNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecc---cCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence 3456677889999999999999988 77999999998776544 5789999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||.||.+|++.++++..-...+++..+..|++++++||.|||.+| .||||||+.||||+.+|.|||+|||.+....+.
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 999999999999998766778999999999999999999999999 999999999999999999999999976433221
Q ss_pred -------CccccCCccCCcccccC--CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 227 -------KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 227 -------~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
.+++||+.|||||++.. ..|+.|+||||||++..||.+|..||....... ..-..-....
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk-----------vLl~tLqn~p 249 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK-----------VLLLTLQNDP 249 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH-----------HHHHHhcCCC
Confidence 45688999999999644 459999999999999999999999985432110 0000000111
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....-..+..+-....+..+..++..||++||.+|||+++++++-..
T Consensus 250 p~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FF 296 (516)
T KOG0582|consen 250 PTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFF 296 (516)
T ss_pred CCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHH
Confidence 00001111111123345679999999999999999999999998553
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-47 Score=353.27 Aligned_cols=245 Identities=20% Similarity=0.267 Sum_probs=212.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChH---HHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK---QFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~---~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+...||.|+||.|-++.... .|+.||||.++++...+.. .+.+||+||+.|+||||++++++|+..+.+.|
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~---sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHK---SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred HHHHHHHhcCCcccceeehhhcc---CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 34567788999999999999876 8999999999988766544 57899999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||..+|.|++++. ..+.|++.+++++++||.+|+.|+|.++ ++|||||.+|||||.++++||+|||++-...+.
T Consensus 131 vMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~k 207 (668)
T KOG0611|consen 131 VMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKK 207 (668)
T ss_pred EEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence 999999999999997 5678999999999999999999999998 999999999999999999999999999877765
Q ss_pred --CccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
.+++|++.|.+||++.|.+| ++.+|.|||||+||.|+.|..||.+.|-. .++..
T Consensus 208 fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-----------------------~lvrQ 264 (668)
T KOG0611|consen 208 FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-----------------------RLVRQ 264 (668)
T ss_pred HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH-----------------------HHHHH
Confidence 47899999999999999998 67899999999999999999999876421 11111
Q ss_pred ccCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 304 HLEGNF-SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 304 ~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..++.+ .+..+....-||++||..||.+|.|+.+|..|-|-
T Consensus 265 Is~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWv 306 (668)
T KOG0611|consen 265 ISRGAYREPETPSDASGLIRWMLMVNPERRATIEDIASHWWV 306 (668)
T ss_pred hhcccccCCCCCchHHHHHHHHHhcCcccchhHHHHhhhhee
Confidence 122221 12334557789999999999999999999998763
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-46 Score=355.56 Aligned_cols=253 Identities=19% Similarity=0.196 Sum_probs=208.4
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--------------ChHHHHHHHHHhhcCCCCccce
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------------DPKQFADEAWGVGKLRHKRLAN 134 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--------------~~~~~~~E~~~l~~l~H~nIv~ 134 (527)
...+.++.+||.|.||.|-+|++.. +++.||||++.+.... ..+.+.+||.||+++.|||||+
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~---~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEV---DGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecC---CCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 3456688899999999999999988 8999999999764321 1357899999999999999999
Q ss_pred eEEEEEeC--CeeeEEEEecCCCCHhHHhhhcCCCC-cCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC
Q 009750 135 LIGYCCDG--DERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (527)
Q Consensus 135 l~~~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~~-l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~ 211 (527)
|+++..+. ..+|||+|||..|.+...- .... +++.+++.++++++.||+|||.++ ||||||||+|+||+++|+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCc
Confidence 99998764 5799999999988775433 3444 999999999999999999999999 999999999999999999
Q ss_pred ceeecccCccccCCC---------CccccCCccCCcccccCCc----CCCCcccchhhHHHHHHHhCCCCCCCCCccccc
Q 009750 212 PRLSCFGLMKNSRDG---------KSYSTNLAYTPPEYLRNGR----VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWN 278 (527)
Q Consensus 212 ~kl~DFG~a~~~~~~---------~~~~~t~~y~aPE~~~~~~----~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~ 278 (527)
+||+|||.+.....+ ...+|||.|+|||...++. .+.+.||||+||+||.|+.|+.||.+..
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~----- 323 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF----- 323 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch-----
Confidence 999999998754221 2458999999999997733 3668899999999999999999996541
Q ss_pred cccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 279 TVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.-..+.+|++..+.-+...+..+.+.+||.++|.+||.+|.+..+|..|.+....
T Consensus 324 --------------~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 324 --------------ELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred --------------HHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 1223345555554433334567889999999999999999999999999886543
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=360.96 Aligned_cols=242 Identities=18% Similarity=0.293 Sum_probs=211.8
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.+..||+|+||.||+|.+.. +++.||||++......+ .+++.+|+.+|..++++||.++||.+..+..++++||||
T Consensus 17 ~~~~IgrGsfG~Vyk~~d~~---t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 17 KLELIGRGSFGEVYKAIDNK---TKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred cchhccccccceeeeeeecc---ccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 45778999999999999998 88999999998765443 678999999999999999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Cc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~ 228 (527)
.||++.+.|. ....+.+..+.-++++++.||.|||+.+ .+|||||+.|||+..+|.+||+|||++...... .+
T Consensus 94 ~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t 170 (467)
T KOG0201|consen 94 GGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT 170 (467)
T ss_pred cCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence 9999999996 4455588888899999999999999999 999999999999999999999999998765543 57
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
++||+.|||||++.+..|+.|+||||||++.+||.+|.+|+...+ ...+.-++.....+.
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~h--------------------PmrvlflIpk~~PP~ 230 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLH--------------------PMRVLFLIPKSAPPR 230 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccC--------------------cceEEEeccCCCCCc
Confidence 899999999999998899999999999999999999999985432 233333444444444
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
+....++.+++|+..||++||+.||++.++|+|
T Consensus 231 L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 231 LDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 445677889999999999999999999999987
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-47 Score=350.14 Aligned_cols=261 Identities=23% Similarity=0.304 Sum_probs=207.4
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCc--CCCCChHHHHHHHHHhhcCCCCccceeEEEEEe-----CCeeeE
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTK--HAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD-----GDERLL 147 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-----~~~~~l 147 (527)
++.||+|+||.|+.+.++. +|+.||||++.. ......++..+|+++|++++|+||+.+++++.. -..+|+
T Consensus 27 ~~~iG~GAyGvVcsA~~~~---t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYi 103 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKR---TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYL 103 (359)
T ss_pred cccccCcceeeEEEEEEcC---CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEE
Confidence 6789999999999999998 889999999983 344456789999999999999999999999865 356899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC--
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~-- 225 (527)
|+|+|+. +|...++ .+..++...+..++.||++||.|+|+.+ |+||||||+|+|++.+..+||+|||+|+....
T Consensus 104 V~elMet-DL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~ 179 (359)
T KOG0660|consen 104 VFELMET-DLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF 179 (359)
T ss_pred ehhHHhh-HHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccC
Confidence 9999954 9999997 4556999999999999999999999999 99999999999999999999999999998742
Q ss_pred ----CCccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccc----hhhHHHHHhcCc
Q 009750 226 ----GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKF----NFGALDMIRGKN 296 (527)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 296 (527)
.+.++.|.+|.|||++.. ..|+.+.||||+|||+.||++|++.|+|.+........... .......+....
T Consensus 180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ 259 (359)
T KOG0660|consen 180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK 259 (359)
T ss_pred cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence 246678999999999865 46999999999999999999999999998754221110000 111122222222
Q ss_pred chhhccc---ccCCCCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 297 ILHLMDS---HLEGNFS---SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 297 ~~~~~~~---~~~~~~~---~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
....+.. ..+.++. +...+.+.+|+.+||..||.+|+|++++|+|-
T Consensus 260 ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 260 ARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred HHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 2222221 1111111 23457788999999999999999999999984
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-46 Score=368.42 Aligned_cols=243 Identities=19% Similarity=0.279 Sum_probs=209.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
+..+++.||+|+||.|+++..+. +++.+|||++++... .+.+..+.|..|+... +||.+++++..|....++|
T Consensus 369 ~F~~l~vLGkGsFGkV~lae~k~---~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 369 DFRLLAVLGRGSFGKVLLAELKG---TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred ceEEEEEeccCcCceEEEEEEcC---CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 44588899999999999999998 888999999998754 3457789999999988 5999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC--
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR-- 224 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~-- 224 (527)
+||||+.||++..+. ....+++..+..++..|+.||.|||+++ |||||||.+|||||.+|++||+|||+++...
T Consensus 446 fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCC
Confidence 999999999955444 5578999999999999999999999999 9999999999999999999999999998643
Q ss_pred --CCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 225 --DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 225 --~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
...+++|||.|||||++.+..|+.++|+|||||+|||||.|+.||++++..+. +..|+.
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~-------------------FdsI~~ 582 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV-------------------FDSIVN 582 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH-------------------HHHHhc
Confidence 34688999999999999999999999999999999999999999998753321 111221
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNT-----KDLVST 341 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~-----~~vl~~ 341 (527)
. ...+|...+.+...+++++|.++|++|.-+ ++|.+|
T Consensus 583 d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 583 D--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred C--CCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 1 123677888899999999999999999755 455554
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-45 Score=344.24 Aligned_cols=251 Identities=20% Similarity=0.216 Sum_probs=214.5
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
++..++++.||.|.-|+||++.+++ ++..+|+|++.+..... ..+...|-+||+.++||.++.||..|+.+...
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~---t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~ 152 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRG---TNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS 152 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecC---CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence 4445578899999999999999998 77999999998875443 34678899999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC-
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR- 224 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~- 224 (527)
|+|||||+||+|..+++.+....+++..++.++.+|+-||+|||..| ||+|||||+||||-++|++.|+||.++....
T Consensus 153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999999999999888889999999999999999999999999 9999999999999999999999999753100
Q ss_pred ---------------------------------C-C-------------------------CccccCCccCCcccccCCc
Q 009750 225 ---------------------------------D-G-------------------------KSYSTNLAYTPPEYLRNGR 245 (527)
Q Consensus 225 ---------------------------------~-~-------------------------~~~~~t~~y~aPE~~~~~~ 245 (527)
. . .+++||-.|+|||++.|..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 1246788999999999999
Q ss_pred CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhc
Q 009750 246 VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCL 325 (527)
Q Consensus 246 ~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 325 (527)
.+.++|+|+|||+|||||.|..||.+.+. ...+..++...+.-.-....+..+.|||+++|
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~-------------------~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LL 372 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNN-------------------KETLRNIVGQPLKFPEEPEVSSAAKDLIRKLL 372 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCc-------------------hhhHHHHhcCCCcCCCCCcchhHHHHHHHHHh
Confidence 99999999999999999999999987632 23344555444443333466788999999999
Q ss_pred ccCCCCCCC----HHHHHHHh
Q 009750 326 QYEPRERPN----TKDLVSTL 342 (527)
Q Consensus 326 ~~dp~~Rpt----~~~vl~~L 342 (527)
.+||.+|.. +.||-+|-
T Consensus 373 vKdP~kRlg~~rGA~eIK~Hp 393 (459)
T KOG0610|consen 373 VKDPSKRLGSKRGAAEIKRHP 393 (459)
T ss_pred ccChhhhhccccchHHhhcCc
Confidence 999999988 88887763
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-45 Score=356.11 Aligned_cols=251 Identities=22% Similarity=0.357 Sum_probs=202.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+...||+|.||+||+|++.. + ||||+++...... .+.|.+|+..+++-+|.||+-+.|+|...+. .||+
T Consensus 394 v~l~~rIGsGsFGtV~Rg~whG---d---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiT 466 (678)
T KOG0193|consen 394 VLLGERIGSGSFGTVYRGRWHG---D---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIIT 466 (678)
T ss_pred hhccceeccccccceeeccccc---c---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeee
Confidence 3366789999999999999976 3 9999998776544 4579999999999999999999999998776 9999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
.||+|-+|+.+|+- ....|.....+.|++||+.|+.|||.++ |||||||..||+|.+++.|||+|||++......
T Consensus 467 qwCeGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~ 544 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE 544 (678)
T ss_pred hhccCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeeccc
Confidence 99999999999975 4467899999999999999999999999 999999999999999999999999998643211
Q ss_pred ---CccccCCccCCcccccC---CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 227 ---KSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
....+...|||||++.. .+|+..+||||||||+|||+||..||.... .+ ++.+.. -.+.-..+.
T Consensus 545 ~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~-~d----qIifmV-----GrG~l~pd~ 614 (678)
T KOG0193|consen 545 QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN-RD----QIIFMV-----GRGYLMPDL 614 (678)
T ss_pred cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC-hh----heEEEe-----cccccCccc
Confidence 22345678999999964 469999999999999999999999986321 00 000000 000000000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
......++.++.+|+..||.+++++||.+.+++..|+.+..
T Consensus 615 ------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 615 ------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 01224567789999999999999999999999998887764
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-45 Score=363.79 Aligned_cols=256 Identities=20% Similarity=0.274 Sum_probs=201.7
Q ss_pred ccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeC-Ceee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDG-DERL 146 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~-~~~~ 146 (527)
+.+.+.||+|+||.||+|.+.. ...+++.||||+++..... ..+.+.+|+.++.++ +|||||+++++|... ..++
T Consensus 9 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~ 88 (338)
T cd05102 9 LRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLM 88 (338)
T ss_pred ceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceE
Confidence 3467789999999999998532 1125678999999754322 235699999999999 899999999998764 4589
Q ss_pred EEEEecCCCCHhHHhhhcC------------------------------------------------------------C
Q 009750 147 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------N 166 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~------------------------------------------------------------~ 166 (527)
+||||+++|+|.+++.... .
T Consensus 89 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (338)
T cd05102 89 VIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWK 168 (338)
T ss_pred EEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccccc
Confidence 9999999999999986421 1
Q ss_pred CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC------ccccCCccCCccc
Q 009750 167 QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEY 240 (527)
Q Consensus 167 ~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~ 240 (527)
..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...+++.|+|||+
T Consensus 169 ~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 247 (338)
T cd05102 169 SPLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPES 247 (338)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHH
Confidence 34788899999999999999999999 9999999999999999999999999997643321 2234678999999
Q ss_pred ccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHH
Q 009750 241 LRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 319 (527)
Q Consensus 241 ~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (527)
+.+..++.++|||||||+||||++ |..||++...... ....... ......+...+..+.+
T Consensus 248 ~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~----------~~~~~~~---------~~~~~~~~~~~~~l~~ 308 (338)
T cd05102 248 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE----------FCQRLKD---------GTRMRAPENATPEIYR 308 (338)
T ss_pred hhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH----------HHHHHhc---------CCCCCCCCCCCHHHHH
Confidence 998899999999999999999997 9999875421100 0011111 1111123345567899
Q ss_pred HHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 320 LASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 320 li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
|+.+||+.||.+|||+.++++.|+.+..
T Consensus 309 li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 309 IMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=350.86 Aligned_cols=243 Identities=18% Similarity=0.254 Sum_probs=200.8
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEe----CCeeeEEE
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLLVA 149 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lv~ 149 (527)
.+|+|++|.||+|.+ +|+.||||+++...... .+.|.+|+.+|++++|||||+++|++.+ ...+++||
T Consensus 27 ~i~~g~~~~v~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~ 101 (283)
T PHA02988 27 LIKENDQNSIYKGIF-----NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLIL 101 (283)
T ss_pred EEeeCCceEEEEEEE-----CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEE
Confidence 469999999999998 56789999998764433 3578899999999999999999999977 35689999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCCCceeecccCccccCCC-C
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-K 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-~ 227 (527)
||+++|+|.+++. ....+++...+.++.+++.||.|||+. + ++||||||+|||+++++.+||+|||+++..... .
T Consensus 102 Ey~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~ 178 (283)
T PHA02988 102 EYCTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF 178 (283)
T ss_pred EeCCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEECCCCcEEEcccchHhhhccccc
Confidence 9999999999997 345789999999999999999999985 6 899999999999999999999999998864433 3
Q ss_pred ccccCCccCCcccccC--CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 SYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||...+... . ...+.....
T Consensus 179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~-----------~--------~~~i~~~~~ 239 (283)
T PHA02988 179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE-----------I--------YDLIINKNN 239 (283)
T ss_pred cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH-----------H--------HHHHHhcCC
Confidence 4567899999999976 679999999999999999999999986532110 0 011111112
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
+...+..++..+.+|+.+||+.||.+|||+.++++.|+.++
T Consensus 240 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 240 SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 22334456778999999999999999999999999998764
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-45 Score=355.27 Aligned_cols=248 Identities=19% Similarity=0.213 Sum_probs=217.0
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCe-ee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDE-RL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~ 146 (527)
+.+..+..+|+|+||.++.++.+. +++.+++|.+....... .....+|+.+++++.|||||.+.+.|+.++. .+
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~---~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKS---DDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred chhhhhhhcCccccchhhhhhhcc---CCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence 346678899999999999999988 77899999998765444 3468999999999999999999999999888 99
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
|||+||+||+|.+.+...+...++++.+..|+.|++.|+.|||++. |+|||||+.||++++++.|||+|||+|+.....
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999999998877788999999999999999999999888 999999999999999999999999999987654
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.+.+||+.||.||.+.+.+|+.|+|||||||++|||++-+++|...+.... +.++..
T Consensus 160 ~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L-------------------i~ki~~ 220 (426)
T KOG0589|consen 160 DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL-------------------ILKINR 220 (426)
T ss_pred hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH-------------------HHHHhh
Confidence 467899999999999999999999999999999999999999976543211 122222
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
. ...+.+...+.++..||..||..+|..||++.++|.+
T Consensus 221 ~-~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 221 G-LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred c-cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 2 1234567778889999999999999999999999987
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=342.97 Aligned_cols=252 Identities=24% Similarity=0.305 Sum_probs=199.1
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCC-----eeeEEE
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD-----ERLLVA 149 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lv~ 149 (527)
.+.+|.|+||.||+|.... +++.||||++-.+. +--.+|+.+|++++|||||+|+-+|.... ...+||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e---~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRE---TEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred eEEEeecccceEEEEEEcC---CCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 3456999999999999988 67889999986554 34467999999999999999999986532 356899
Q ss_pred EecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC-CCceeecccCccccCCC
Q 009750 150 EYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~~~~~~ 226 (527)
|||+. +|.+.+++ ..+..++.-.++-+..||++||.|||+.+ |+||||||.|||+|.+ |.+||||||.|+....+
T Consensus 102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 99987 99999974 13567888888999999999999999999 9999999999999976 99999999999986654
Q ss_pred ---CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch----
Q 009750 227 ---KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL---- 298 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 298 (527)
.++..|..|+|||.+.|. .|+.+.||||.|||+.||+-|++.|+|.+....... ....+......
T Consensus 180 epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~e-------Iik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 180 EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVE-------IIKVLGTPTREDIKS 252 (364)
T ss_pred CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHH-------HHHHhCCCCHHHHhh
Confidence 356679999999999885 499999999999999999999999999765432111 11111111111
Q ss_pred -----------hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 299 -----------HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 299 -----------~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
++....+..-+....+++..+|+.++|..+|.+|.++.+++.|-
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~ 307 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP 307 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence 11111111113344567889999999999999999999999873
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=358.85 Aligned_cols=248 Identities=17% Similarity=0.191 Sum_probs=207.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+++.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKG---TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVY 94 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEE
Confidence 456678889999999999999987 788999999875432 23456899999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 95 lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 95 FLLEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EEEcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999999997 4467899999999999999999999999 999999999999999999999999999875543
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ... .+....
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----------~~~--------~i~~~~- 231 (329)
T PTZ00263 172 TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR-----------IYE--------KILAGR- 231 (329)
T ss_pred cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH-----------HHH--------HHhcCC-
Confidence 34578999999999999889999999999999999999999986532110 001 111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~~ 344 (527)
..++...+..+.+|+.+||+.||.+||+ +.+++.|-+.
T Consensus 232 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f 274 (329)
T PTZ00263 232 -LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYF 274 (329)
T ss_pred -cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCcc
Confidence 1223334567889999999999999987 7899888553
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-44 Score=358.68 Aligned_cols=250 Identities=18% Similarity=0.188 Sum_probs=199.1
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
++..+++.||.|+||.||+|.+.. +++.||||++...... ..+.+.+|+++++.++|+||+++++++...+.+++|
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRP---TGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECC---CCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence 344467889999999999999987 7889999998654322 245789999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++|+|.... ..++..+..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 151 ~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 151 LEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred EecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 9999999986532 3567788899999999999999999 999999999999999999999999998765432
Q ss_pred --CccccCCccCCcccccC-----CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 227 --KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
....||..|+|||++.. ...+.++|||||||++|||++|+.||.......+. ... ..
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-----------~~~-----~~ 287 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWA-----------SLM-----CA 287 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHH-----------HHH-----HH
Confidence 34578999999998843 23456899999999999999999998643222110 000 00
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
+ ........+...+..+.+||.+||+.||++|||+.++++|-+...
T Consensus 288 ~-~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~ 333 (353)
T PLN00034 288 I-CMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILR 333 (353)
T ss_pred H-hccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence 0 000111223345667999999999999999999999999866544
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-45 Score=337.57 Aligned_cols=262 Identities=22% Similarity=0.248 Sum_probs=204.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCc-cceeEEEEEeCC-----
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKR-LANLIGYCCDGD----- 143 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~----- 143 (527)
+..+.+||+|+||+||+|+.+. +|+.||+|+++.... .......+|+.+|++|+|+| ||.|++++....
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~---~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKR---TGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEec---CCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 3456778999999999999998 889999999987654 34567899999999999999 999999998877
Q ss_pred -eeeEEEEecCCCCHhHHhhhcCC--CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCc
Q 009750 144 -ERLLVAEYMPNDTLAKHLFHWEN--QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 144 -~~~lv~E~~~~g~L~~~l~~~~~--~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
.++|||||++. +|..++..... ..++...++.+++||+.||+|||+++ |+||||||+||||+++|.+||+|||+|
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchH
Confidence 78999999976 99999975332 46788899999999999999999999 999999999999999999999999999
Q ss_pred cccCC----CCccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 221 KNSRD----GKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 221 ~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
+...- -.+.++|..|+|||++.+. .|++..||||+|||+.||+++++.|++..+.... ...+.........
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql----~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQL----FRIFRLLGTPNEK 243 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHH----HHHHHHcCCCCcc
Confidence 86552 2345779999999999987 5999999999999999999999999987642110 0000000000000
Q ss_pred cchhhc---cc--ccCC-----CCCH---HHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 296 NILHLM---DS--HLEG-----NFSS---EEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 296 ~~~~~~---~~--~~~~-----~~~~---~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.+.... +. .... .+.. .......+++.+||+.+|.+|.|+..++.|-
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~ 303 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHP 303 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcCh
Confidence 000000 00 0000 0001 1124678999999999999999999999983
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=377.46 Aligned_cols=429 Identities=17% Similarity=0.147 Sum_probs=287.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++....... .+++.+|++++++++||||+++++++.+++..++
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~---tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyL 79 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPV---CSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYY 79 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECC---CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEE
Confidence 45578889999999999999987 78899999997653322 3579999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcC---------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 148 VAEYMPNDTLAKHLFHWE---------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
||||++||+|.+++.... ...+++..++.++.||++||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecC
Confidence 999999999999986311 234567788999999999999999999 9999999999999999999999999
Q ss_pred CccccCC----------------------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccc
Q 009750 219 LMKNSRD----------------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVV 276 (527)
Q Consensus 219 ~a~~~~~----------------------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~ 276 (527)
+++.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...+...
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9875411 012358999999999999999999999999999999999999986532110
Q ss_pred cccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHhccccCCCC--CCc
Q 009750 277 WNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP-NTKDLVSTLAPLQNRPD--VPS 353 (527)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-t~~~vl~~L~~~~~~~~--~~~ 353 (527)
. ... ...............++.+.+++.+||+.||++|| +++++++.|+....... .+.
T Consensus 239 i--------------~~~----~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~ 300 (932)
T PRK13184 239 I--------------SYR----DVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVK 300 (932)
T ss_pred h--------------hhh----hhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccc
Confidence 0 000 00000000000123456688999999999999996 56777777776533211 010
Q ss_pred cccc-----------------CCCCCCCCCC-CCCCCCCCCCC------------------------cccccchHHHhhh
Q 009750 354 YVML-----------------GIPRHEEAPP-TPQHPLSPMGD------------------------ACSRMDLTAIHQI 391 (527)
Q Consensus 354 ~~~~-----------------~~~~~~~~~~-~~~~~~~~~~~------------------------~~~~~~~~~~~~~ 391 (527)
.... ..+.....+. ......+.... +....+-+.+...
T Consensus 301 ~~l~~~~~~~wk~~e~iLlsk~~~~l~~s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~ 380 (932)
T PRK13184 301 ATLMTKKKSCWKFYEPILLSKYFPMLESSPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCG 380 (932)
T ss_pred cccccccchhccccchhhhhhhcccccCCchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccc
Confidence 0000 0000000000 00000000000 0000000000000
Q ss_pred hhhc-ccCCCc----------c---------ccchhhh--------HHHHH-----------------------HHHHHH
Q 009750 392 LVMT-HYKDDE----------G---------TNELSFQ--------EWTQQ-----------------------MRDMLE 420 (527)
Q Consensus 392 l~~~-~~~~~~----------~---------~~~~~~~--------~~~~~-----------------------~~~~~~ 420 (527)
.-.. ..+.+. + .....++ ..... +++++.
T Consensus 381 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (932)
T PRK13184 381 YGLWLHIKNNELSVSLVKNGLEIQKKSQEIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQD 460 (932)
T ss_pred cceeeecccccceeeeecccceeecCCcccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchh
Confidence 0000 000000 0 0000000 00000 022111
Q ss_pred -----------------HHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC--CHHHHHHHHHHHHhc----C---ChHHHHH
Q 009750 421 -----------------ARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--SPTVYARRSLCHLMC----D---QPDAALR 474 (527)
Q Consensus 421 -----------------~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~~~~----g---~~~~A~~ 474 (527)
......++...+.|+.|+..|++.-.--|.- -.++.+..|.+++.. | .+++|+.
T Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (932)
T PRK13184 461 IMSNIAIFESSGALRVSCLAVPDAFLAEKLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALS 540 (932)
T ss_pred hccceEEEEecCceeeecccCcHHHHhhHHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHH
Confidence 2234577888999999999999998877651 367888899888763 2 3566666
Q ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccc
Q 009750 475 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 475 ~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
.|++ +.-.|.-|--|...|.+|..+|+|+|-++.|.-|++.-|+++.
T Consensus 541 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (932)
T PRK13184 541 EFSY-LHGGVGAPLEYLGKALVYQRLGEYNEEIKSLLLALKRYSQHPE 587 (932)
T ss_pred HHHH-hcCCCCCchHHHhHHHHHHHhhhHHHHHHHHHHHHHhcCCCCc
Confidence 6665 3556778888999999999999999999999999998887653
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=351.13 Aligned_cols=249 Identities=17% Similarity=0.203 Sum_probs=204.2
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+++.||+|+||.||+|.+.. +++.||||.+..... .....+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred EEEEEecCCCEEEEEEEEec---CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 56778999999999999987 789999999875432 223468899999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---C
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---K 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---~ 227 (527)
|+++|+|..++.......+++..++.++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||++...... .
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVR 159 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeec
Confidence 999999998886544557899999999999999999999999 999999999999999999999999999865432 2
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+.... .... ...+. ....
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-----------~~~~-----~~~~~-~~~~ 222 (285)
T cd05631 160 GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-----------REEV-----DRRVK-EDQE 222 (285)
T ss_pred CCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-----------HHHH-----HHHhh-cccc
Confidence 34689999999999999999999999999999999999999975432110 0000 00000 0111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLA 343 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~ 343 (527)
.++...+..+.+|+.+||+.||.+||+ ++++++|-+
T Consensus 223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~ 263 (285)
T cd05631 223 EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPI 263 (285)
T ss_pred cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHh
Confidence 233445677899999999999999997 888988754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-45 Score=358.78 Aligned_cols=240 Identities=20% Similarity=0.245 Sum_probs=201.2
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
.||+|+||.||+|.... +++.||||++++... .....+.+|+.++++++||||+++++++...+..+|||||++
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~ 78 (323)
T cd05571 2 LLGKGTFGKVILVREKA---TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYAN 78 (323)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCC
Confidence 47999999999999987 789999999976432 223468899999999999999999999999999999999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCcc
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKSY 229 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~~ 229 (527)
+|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ....
T Consensus 79 ~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 155 (323)
T cd05571 79 GGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccce
Confidence 999999997 4567899999999999999999999999 99999999999999999999999999875322 2345
Q ss_pred ccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCC
Q 009750 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (527)
.||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ... .+... ...+
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-----------~~~--------~~~~~--~~~~ 214 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-----------LFE--------LILME--EIRF 214 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH-----------HHH--------HHHcC--CCCC
Confidence 68999999999999999999999999999999999999986532110 000 01111 1123
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhc
Q 009750 310 SSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLA 343 (527)
Q Consensus 310 ~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~ 343 (527)
+...+..+.+|+.+||+.||++|| ++.++++|-+
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~ 253 (323)
T cd05571 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRF 253 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCC
Confidence 445567789999999999999999 8999998754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=352.68 Aligned_cols=246 Identities=18% Similarity=0.194 Sum_probs=205.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+...+++|
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 3 LERIKTVGTGTFGRVHLVRDRI---SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred ceeeeeeecCCCeEEEEEEEcC---CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence 4467888999999999999987 788999999875432 2245688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-C
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-K 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-~ 227 (527)
|||+++|+|.+++. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... .
T Consensus 80 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~ 156 (291)
T cd05612 80 MEYVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTW 156 (291)
T ss_pred EeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcc
Confidence 99999999999997 4457899999999999999999999999 999999999999999999999999998865443 3
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+... ... .+... ..
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~-----------~~~--------~i~~~--~~ 215 (291)
T cd05612 157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG-----------IYE--------KILAG--KL 215 (291)
T ss_pred cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHH--------HHHhC--Cc
Confidence 4578999999999998889999999999999999999999986542110 001 11111 11
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLAP 344 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~~ 344 (527)
.++...+..+.+|+.+||+.||.+||+ ++++++|-+.
T Consensus 216 ~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~ 257 (291)
T cd05612 216 EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWF 257 (291)
T ss_pred CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccc
Confidence 233444667899999999999999995 9999988664
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-44 Score=355.73 Aligned_cols=198 Identities=17% Similarity=0.187 Sum_probs=178.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-C-----CccceeEEEEEeCCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-H-----KRLANLIGYCCDGDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~nIv~l~~~~~~~~~~ 145 (527)
+.++..||+|+||.|.+|.+.. +++.||||+++.... -..+...|+.||..|+ | -|||+++++|...++.
T Consensus 188 Y~V~e~LGkGtFGQVvk~~d~~---T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 188 YEVLEVLGKGSFGQVVKAYDHK---TGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEecccccceeEEEEecC---CCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 4568889999999999999998 899999999987542 2356788999999996 4 4899999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC--CCceeecccCcccc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN--GDPRLSCFGLMKNS 223 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~--~~~kl~DFG~a~~~ 223 (527)
|||+|.+.. +|+++|+.+...+++...++.|+.||+.||.+||..+ |||+||||+||||.+- ..+||+|||.++..
T Consensus 264 ciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 264 CIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEeccccccc
Confidence 999999965 9999999888889999999999999999999999999 9999999999999644 36999999999987
Q ss_pred CCC-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcc
Q 009750 224 RDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMV 275 (527)
Q Consensus 224 ~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~ 275 (527)
... .+++.+..|+|||+++|.+|+.+.||||||||+.||++|.+.|++.+..
T Consensus 342 ~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~ 394 (586)
T KOG0667|consen 342 SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEY 394 (586)
T ss_pred CCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHH
Confidence 665 4678899999999999999999999999999999999999999998643
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=380.27 Aligned_cols=252 Identities=26% Similarity=0.419 Sum_probs=210.6
Q ss_pred ccccCCCCCCCeEEEEEecCCCCC--ceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDN--RRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~--~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+...||+|.||.||+|+..+...+ ...||||.+++... ....+|.+|..+|++++|||||+++|+|.+....+|++|
T Consensus 696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le 775 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE 775 (1025)
T ss_pred eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence 456789999999999998864322 34599999987643 345689999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcC-----CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 151 YMPNDTLAKHLFHWE-----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
||+||+|..+|++.+ ...++..+.+.++.+||+|+.||++++ +|||||..+|+||+....+||+|||+|+....
T Consensus 776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~ 854 (1025)
T KOG1095|consen 776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDIYD 854 (1025)
T ss_pred hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhhhh
Confidence 999999999998632 456899999999999999999999998 99999999999999999999999999995443
Q ss_pred CCcc------ccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 226 GKSY------STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 226 ~~~~------~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
...+ .-...|||||.+..+.++.|+|||||||+|||++| |..||+..+. ..+.
T Consensus 855 ~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n--------------------~~v~ 914 (1025)
T KOG1095|consen 855 KDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN--------------------FEVL 914 (1025)
T ss_pred chheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch--------------------HHHH
Confidence 3211 22467999999999999999999999999999999 6677765421 1112
Q ss_pred h-hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 299 H-LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 299 ~-~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
. .+... +.+.|..++..+.+||.+||+.+|++||++..+++.+..+..
T Consensus 915 ~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 915 LDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred HHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 2 12222 455678888999999999999999999999999998887654
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=356.57 Aligned_cols=257 Identities=21% Similarity=0.324 Sum_probs=212.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceE-EEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRW-IAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~-vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+.||+|+||.||+|+++..+..... ||||..+... ....++|++|+++|++++|||||+++|++.....++|||
T Consensus 161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivm 240 (474)
T KOG0194|consen 161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVM 240 (474)
T ss_pred ccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEE
Confidence 346889999999999999875321223 8999988633 233568999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
|+|.||+|.++|+.. ...++..+++.++.+.+.||+|||+++ +|||||-.+|+|++.++.+||+|||+++......
T Consensus 241 El~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~ 318 (474)
T KOG0194|consen 241 ELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK 318 (474)
T ss_pred EecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceeec
Confidence 999999999999853 336999999999999999999999999 9999999999999999999999999987654211
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...-...|+|||.+..+.|+.++|||||||++||+++ |..|+++.... .....++...
T Consensus 319 ~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-------------------~v~~kI~~~~ 379 (474)
T KOG0194|consen 319 KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-------------------EVKAKIVKNG 379 (474)
T ss_pred cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-------------------HHHHHHHhcC
Confidence 1123578999999999999999999999999999999 78888764211 1112222334
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCCCC
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 351 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~~~ 351 (527)
.+...+...+..+..++.+||..||++||||.++.+.|+.+......
T Consensus 380 ~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 380 YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 44455667778889999999999999999999999999988765543
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-44 Score=351.62 Aligned_cols=239 Identities=18% Similarity=0.194 Sum_probs=199.0
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
||+|+||.||+|.+.. +++.||||+++... ......+.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 77 (312)
T cd05585 1 IGKGSFGKVMQVRKRD---TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFING 77 (312)
T ss_pred CCcCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCC
Confidence 6999999999999987 78899999987542 22345688999999999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCccc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKSYS 230 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~~~ 230 (527)
|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....
T Consensus 78 g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 78 GELFHHLQ--REGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 99999997 4567999999999999999999999999 99999999999999999999999999875322 22456
Q ss_pred cCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCC
Q 009750 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310 (527)
Q Consensus 231 ~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (527)
||+.|+|||++.+..++.++|||||||++|||++|+.||...+... . ...+... ...++
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~-----------~--------~~~~~~~--~~~~~ 213 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE-----------M--------YRKILQE--PLRFP 213 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH-----------H--------HHHHHcC--CCCCC
Confidence 8999999999999899999999999999999999999986532110 0 0111111 11234
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHhc
Q 009750 311 SEEATVVFDLASRCLQYEPRERPN---TKDLVSTLA 343 (527)
Q Consensus 311 ~~~~~~~~~li~~cl~~dp~~Rpt---~~~vl~~L~ 343 (527)
...+..+.+|+.+||+.||.+||+ +.+++.|-+
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~ 249 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPF 249 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCC
Confidence 455677899999999999999975 677777744
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-44 Score=352.71 Aligned_cols=270 Identities=20% Similarity=0.221 Sum_probs=207.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||+|+||.||++.+.. ++..||+|++...... ..+.+.+|+++|++++||||+++++++...+..++||
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 6 DFERISELGAGNGGVVTKVQHKP---SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cceEEEeecCCCCEEEEEEEECC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 34578889999999999999987 7889999998765322 2357999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--C
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--K 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--~ 227 (527)
||+++|+|.+++. ....+++..+..++.|++.||.|||+.+.|+||||||+|||++.++.+||+|||++...... .
T Consensus 83 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 160 (331)
T cd06649 83 EHMDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 160 (331)
T ss_pred ecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccc
Confidence 9999999999997 34568999999999999999999998644999999999999999999999999998765432 3
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchh---------------------
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNF--------------------- 286 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~--------------------- 286 (527)
...+|+.|+|||++.+..++.++|||||||++|||+||+.||...+.............
T Consensus 161 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
T cd06649 161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPV 240 (331)
T ss_pred cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccc
Confidence 45689999999999988899999999999999999999999965432110000000000
Q ss_pred --hHHHHHhcCcchhhccc---ccCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 287 --GALDMIRGKNILHLMDS---HLEGNF-SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 287 --~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...............+. ...... ....+..+.+|+.+||+.||++|||+.++++|.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~ 305 (331)
T cd06649 241 SGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK 305 (331)
T ss_pred cccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence 00000000000000000 000111 123456799999999999999999999999997643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-44 Score=352.88 Aligned_cols=241 Identities=20% Similarity=0.238 Sum_probs=201.2
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
.||+|+||.||++.... +++.||||++.+... .....+.+|+.+++.++||||+++++++...+..+|||||++
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~ 78 (328)
T cd05593 2 LLGKGTFGKVILVREKA---SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVN 78 (328)
T ss_pred eeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCC
Confidence 46999999999999987 789999999976432 224578899999999999999999999999999999999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCcc
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKSY 229 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~~ 229 (527)
+|+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ....
T Consensus 79 ~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~ 155 (328)
T cd05593 79 GGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF 155 (328)
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccc
Confidence 999999886 4457899999999999999999999999 99999999999999999999999999875322 1245
Q ss_pred ccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCC
Q 009750 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (527)
.||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ... .+.. ....+
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~-----------~~~--------~~~~--~~~~~ 214 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-----------LFE--------LILM--EDIKF 214 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH-----------HHH--------Hhcc--CCccC
Confidence 68999999999998899999999999999999999999986532110 000 0000 01123
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 310 SSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 310 ~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
+...+..+.+|+.+||+.||.+|+ ++.++++|.+.
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~ 254 (328)
T cd05593 215 PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFF 254 (328)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCc
Confidence 444567789999999999999997 89999988553
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-44 Score=355.14 Aligned_cols=249 Identities=17% Similarity=0.169 Sum_probs=205.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||.||+|.+... .+..||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNE--DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECC--CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 3455788899999999999987652 346899999865422 23457889999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 108 lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 9999999999999997 4457899999999999999999999999 999999999999999999999999999865433
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....||+.|+|||++.+..++.++|||||||++|||++|..||...+... ... .+....
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-----------~~~--------~i~~~~- 244 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL-----------IYQ--------KILEGI- 244 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH-----------HHH--------HHhcCC-
Confidence 35578999999999998889999999999999999999999986543110 001 111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
..++...+..+.+++.+||+.||.+|+ +++++++|-+.
T Consensus 245 -~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f 287 (340)
T PTZ00426 245 -IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWF 287 (340)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCc
Confidence 112334456688999999999999995 89999988553
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=340.43 Aligned_cols=252 Identities=19% Similarity=0.266 Sum_probs=203.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
..+...||+|+||.||+|.++.....+..||+|.++...... ...|.+|+.++.+++||||+++++++...+..+||||
T Consensus 7 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 86 (266)
T cd05064 7 IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTE 86 (266)
T ss_pred eEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEE
Confidence 446678899999999999876433367889999998653222 3578999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++|+|.+++.. ....+++..++.++.||+.||+|||+.+ ++||||||+|||++.++.+|++|||.+.......
T Consensus 87 ~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~ 164 (266)
T cd05064 87 YMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYT 164 (266)
T ss_pred eCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchhc
Confidence 9999999999974 2457899999999999999999999999 9999999999999999999999999876533221
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...++..|+|||++.+..++.++|||||||++||+++ |..||...+... .... +...
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-----------~~~~---------~~~~ 224 (266)
T cd05064 165 TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-----------VIKA---------VEDG 224 (266)
T ss_pred ccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-----------HHHH---------HHCC
Confidence 1234578999999999999999999999999999875 999886432110 0011 1111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.....+..++..+.+++.+||+.+|.+||++.++++.|..+
T Consensus 225 ~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11223445567789999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-44 Score=353.95 Aligned_cols=254 Identities=18% Similarity=0.175 Sum_probs=207.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||.||+|++.. +++.||||+++.... ...+.+.+|++++..++||||+++++++......+||
T Consensus 3 y~~~~~ig~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 3 FQILTQVGQGGYGQVFLAKKKD---TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred cEEEEEEeecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence 4577889999999999999987 788999999976432 2345688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC-CC
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-GK 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~-~~ 227 (527)
|||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..... ..
T Consensus 80 ~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~ 156 (333)
T cd05600 80 MEYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYAN 156 (333)
T ss_pred EeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccC
Confidence 99999999999996 4567899999999999999999999999 99999999999999999999999999976544 34
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...||+.|+|||++.+..++.++|||||||++|||++|..||...+... ........ ...+......
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-----------~~~~i~~~--~~~~~~~~~~ 223 (333)
T cd05600 157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-----------TWENLKYW--KETLQRPVYD 223 (333)
T ss_pred CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-----------HHHHHHhc--cccccCCCCC
Confidence 5678999999999999999999999999999999999999987543211 00000000 0000000000
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......+..+.+|+.+||..+|.+||++.++++|.+.
T Consensus 224 ~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~ 260 (333)
T cd05600 224 DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFF 260 (333)
T ss_pred ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCccc
Confidence 0012346678899999999999999999999998654
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=320.48 Aligned_cols=254 Identities=20% Similarity=0.220 Sum_probs=208.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC----C----hHHHHHHHHHhhcC-CCCccceeEEE
Q 009750 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP----D----PKQFADEAWGVGKL-RHKRLANLIGY 138 (527)
Q Consensus 68 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~----~----~~~~~~E~~~l~~l-~H~nIv~l~~~ 138 (527)
.|..+.-...+|+|..++|.++..+. +|+.+|+|++...... . .+.-.+|+.||+++ .||+|+++.++
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~---t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ 91 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKE---TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV 91 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcc---cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence 34444444556999999999999988 7888999998644321 1 23467899999999 79999999999
Q ss_pred EEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 139 CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 139 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
++.+..+++|+|.|+.|.|+++|. ..-.+++....+|++|+.+|+.|||..+ ||||||||+|||+|++.++||+|||
T Consensus 92 yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEeccc
Confidence 999999999999999999999997 6678999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCC---ccccCCccCCcccccC------CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHH
Q 009750 219 LMKNSRDGK---SYSTNLAYTPPEYLRN------GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 219 ~a~~~~~~~---~~~~t~~y~aPE~~~~------~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
+++....+. ..+|||+|+|||.+.- ..|+..+|+|++|||+|.|+.|-+||....
T Consensus 169 Fa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk---------------- 232 (411)
T KOG0599|consen 169 FACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK---------------- 232 (411)
T ss_pred eeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH----------------
Confidence 999988774 5699999999998843 248889999999999999999999984321
Q ss_pred HHHhcCcchhhcccc--cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 290 DMIRGKNILHLMDSH--LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 290 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
+++- +..|+... +..+-..+.+..+.+||.+||+.||.+|.|++|+|+|-..++
T Consensus 233 QmlM---LR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 233 QMLM---LRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred HHHH---HHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 1100 11111111 112223456778999999999999999999999999977643
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-44 Score=352.26 Aligned_cols=241 Identities=20% Similarity=0.252 Sum_probs=200.5
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
.||+|+||.||++.... +|+.||+|+++.... .....+.+|+.+++.++||||+++++++...+.++|||||++
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~ 78 (323)
T cd05595 2 LLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 78 (323)
T ss_pred eeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCC
Confidence 46999999999999987 789999999976432 223467889999999999999999999999999999999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Ccc
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSY 229 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~~ 229 (527)
+|+|..++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ...
T Consensus 79 ~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 155 (323)
T cd05595 79 GGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccc
Confidence 999999886 4457899999999999999999999999 999999999999999999999999998753221 235
Q ss_pred ccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCC
Q 009750 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (527)
.||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ... .+... ...+
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-----------~~~--------~~~~~--~~~~ 214 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----------LFE--------LILME--EIRF 214 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH-----------HHH--------HHhcC--CCCC
Confidence 68999999999999999999999999999999999999986432110 000 01111 1123
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 310 SSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 310 ~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
+...++.+.+|+.+||+.||.+|+ ++.++++|-+.
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~ 254 (323)
T cd05595 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 254 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCc
Confidence 444567789999999999999998 89999987543
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=362.78 Aligned_cols=253 Identities=19% Similarity=0.175 Sum_probs=212.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CCccceeEEEE-Ee------C
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYC-CD------G 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~-~~------~ 142 (527)
...|.+.|.+|||+.||.|.+.. .|+.||+|++-..++...+.+.+||++|++|. |+|||.+++.+ .. .
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~---~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVK---GGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecC---CCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 34567788999999999999986 45889999998777667788999999999995 99999999932 21 1
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC-CccccccCCCceEeCCCCCceeecccCcc
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
-+++|.||||.||.|-+++..+....|++.++++|+.++++|+.+||... +|||||||-+||||+.+|+.||||||.+.
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 35789999999999999998766777999999999999999999999987 79999999999999999999999999986
Q ss_pred ccCCCC-------------ccccCCccCCcccc---cCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccch
Q 009750 222 NSRDGK-------------SYSTNLAYTPPEYL---RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 222 ~~~~~~-------------~~~~t~~y~aPE~~---~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 285 (527)
...... ...+|+.|+|||++ .+.++++|+|||+|||+||-|+....||....
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg------------ 262 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG------------ 262 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc------------
Confidence 422111 23579999999988 46679999999999999999999999996431
Q ss_pred hhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
...|++....-+..+..+..+.+||..||+.||.+||++-+|+..+..++..+
T Consensus 263 -----------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 263 -----------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred -----------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 23344444443334578889999999999999999999999999998876543
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=356.90 Aligned_cols=254 Identities=21% Similarity=0.307 Sum_probs=202.1
Q ss_pred ccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 147 (527)
+.+.+.||+|+||.||+|..... ..+++.||||+++.....+ .+.+.+|+.+++.+ +|+|||+++++|...+..++
T Consensus 40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~l 119 (374)
T cd05106 40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLV 119 (374)
T ss_pred ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEE
Confidence 33677889999999999986431 1145679999997654322 45688999999999 89999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcC--------------------------------------------------------------
Q 009750 148 VAEYMPNDTLAKHLFHWE-------------------------------------------------------------- 165 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~-------------------------------------------------------------- 165 (527)
||||+++|+|.+++....
T Consensus 120 v~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (374)
T cd05106 120 ITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKD 199 (374)
T ss_pred eHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccc
Confidence 999999999999986421
Q ss_pred ------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC------ccccCC
Q 009750 166 ------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------SYSTNL 233 (527)
Q Consensus 166 ------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~------~~~~t~ 233 (527)
...+++..+++++.||+.||.|||+++ ++||||||+|||+++++.+||+|||+++...... ...++.
T Consensus 200 ~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~ 278 (374)
T cd05106 200 EEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPV 278 (374)
T ss_pred hhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCcc
Confidence 124788899999999999999999999 9999999999999999999999999987654322 122356
Q ss_pred ccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHH
Q 009750 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSE 312 (527)
Q Consensus 234 ~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (527)
.|+|||++.+..++.++|||||||++|||++ |+.||+..... ..+............+..
T Consensus 279 ~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~-------------------~~~~~~~~~~~~~~~~~~ 339 (374)
T cd05106 279 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN-------------------SKFYKMVKRGYQMSRPDF 339 (374)
T ss_pred ceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-------------------HHHHHHHHcccCccCCCC
Confidence 7999999998899999999999999999997 99998653211 001111111112222233
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 313 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 313 ~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 340 APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 456789999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=356.02 Aligned_cols=253 Identities=20% Similarity=0.297 Sum_probs=200.3
Q ss_pred ccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 147 (527)
..+.+.||+|+||.||+|.... ...++..||||+++.... ...+.+.+|+.+|..+ +|||||+++++|...+..++
T Consensus 37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~l 116 (375)
T cd05104 37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLV 116 (375)
T ss_pred eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCccee
Confidence 3467788999999999997531 112567899999975432 2345789999999999 89999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcC--------------------------------------------------------------
Q 009750 148 VAEYMPNDTLAKHLFHWE-------------------------------------------------------------- 165 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~-------------------------------------------------------------- 165 (527)
||||+++|+|.+++....
T Consensus 117 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (375)
T cd05104 117 ITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYID 196 (375)
T ss_pred eehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecc
Confidence 999999999999986421
Q ss_pred -----------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc------
Q 009750 166 -----------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS------ 228 (527)
Q Consensus 166 -----------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~------ 228 (527)
...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.......
T Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 275 (375)
T cd05104 197 QDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGN 275 (375)
T ss_pred cccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCC
Confidence 124788899999999999999999999 99999999999999999999999999876543321
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
..++..|+|||++.+..++.++|||||||++|||++ |..||....... .....+......
T Consensus 276 ~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-------------------~~~~~~~~~~~~ 336 (375)
T cd05104 276 ARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-------------------KFYKMIKEGYRM 336 (375)
T ss_pred CCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-------------------HHHHHHHhCccC
Confidence 223567999999999999999999999999999998 777875432110 001111111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..+...+..+.+|+.+||+.||++|||+.++++.|+.
T Consensus 337 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 337 LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 1222335678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=356.71 Aligned_cols=248 Identities=18% Similarity=0.169 Sum_probs=200.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||+|++.. +++.||||++...... ..+.+.+|++++++++||||+++++++.+.+.+++|
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv 79 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVD---THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 79 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEE
Confidence 4478889999999999999987 8889999999764322 235689999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC---
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--- 225 (527)
|||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++....
T Consensus 80 ~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 80 MDYIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999999997 4457899999999999999999999999 99999999999999999999999998753210
Q ss_pred ------------------------------------------------CCccccCCccCCcccccCCcCCCCcccchhhH
Q 009750 226 ------------------------------------------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGT 257 (527)
Q Consensus 226 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv 257 (527)
..+..||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 01346899999999999888999999999999
Q ss_pred HHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc--cccCCCCCHHHHHHHHHHHHH--hcccCCCCCC
Q 009750 258 VLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD--SHLEGNFSSEEATVVFDLASR--CLQYEPRERP 333 (527)
Q Consensus 258 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~--cl~~dp~~Rp 333 (527)
++|||+||+.||...+.... ...+.. ...........+..+.+|+.+ |+..+|..|+
T Consensus 237 il~elltG~~Pf~~~~~~~~-------------------~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~ 297 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTET-------------------QLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRN 297 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHH-------------------HHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCC
Confidence 99999999999965421110 001110 001111112345678899988 5566777799
Q ss_pred CHHHHHHHhcc
Q 009750 334 NTKDLVSTLAP 344 (527)
Q Consensus 334 t~~~vl~~L~~ 344 (527)
++.+++.|-..
T Consensus 298 ~~~~~l~hp~f 308 (381)
T cd05626 298 GADDIKAHPFF 308 (381)
T ss_pred CHHHHhcCccc
Confidence 99999998553
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=349.48 Aligned_cols=244 Identities=22% Similarity=0.280 Sum_probs=201.0
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC----CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.||+|+||.||++....+..+++.||||+++.... .....+.+|+.+|+.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 567999999999998865444789999999875321 2234678999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----C
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----K 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~ 227 (527)
+++|+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 99999999996 4466888999999999999999999999 999999999999999999999999998753221 2
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+... . ...+.... .
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-----------~--------~~~~~~~~--~ 217 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-----------T--------IDKILKGK--L 217 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-----------H--------HHHHHcCC--C
Confidence 3468999999999998889999999999999999999999986542110 0 11111111 1
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLA 343 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~ 343 (527)
.++...+..+.+|+.+||+.||++|| ++.+++.|-+
T Consensus 218 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~ 258 (323)
T cd05584 218 NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPF 258 (323)
T ss_pred CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCC
Confidence 23344556789999999999999999 8999988754
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-44 Score=312.63 Aligned_cols=256 Identities=19% Similarity=0.215 Sum_probs=209.3
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCC-----e
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD-----E 144 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~ 144 (527)
..+++...+|+|||+-||.+.... +++.+|+|++.-....+.+..++|++..++++||||++++++...+. .
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s---~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLS---TGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccC---cccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 457788899999999999999776 88999999999887777889999999999999999999999876543 4
Q ss_pred eeEEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCC-CccccccCCCceEeCCCCCceeecccCcc
Q 009750 145 RLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
.||+++|...|+|.+.+... .+..+++.+++.|+.+|++||++||+.. ++.||||||.|||+++.+.++|.|||.+.
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 89999999999999999753 3446999999999999999999999986 58999999999999999999999999986
Q ss_pred ccCCC-------------CccccCCccCCccccc---CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccch
Q 009750 222 NSRDG-------------KSYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 222 ~~~~~-------------~~~~~t~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 285 (527)
...-. .....|..|+|||.+. +...++++|||||||+||+|+.|..||...
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~------------- 244 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI------------- 244 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH-------------
Confidence 53311 1224588999999984 445789999999999999999999998531
Q ss_pred hhHHHHHhcCcch-hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 286 FGALDMIRGKNIL-HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 286 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.-.++.+. .+......-+-....++.+.+||.+||+.||.+||++.+++.+++.+.
T Consensus 245 -----~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 245 -----YQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -----hhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 01222222 122222222222336788999999999999999999999999987653
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-43 Score=341.40 Aligned_cols=268 Identities=18% Similarity=0.235 Sum_probs=202.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
+..+.+++.||.|+||.||+|.... +++.||+|+++..... ....+.+|+.++++++||||+++++++......++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKL---TENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL 80 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECC---CCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 3456678899999999999999987 7889999999754322 34578899999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+++ +|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 v~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 81 VFEYLDS-DLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred EEeCCCc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 9999975 89998864 3445789999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHH-HhcCcc
Q 009750 227 ---KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDM-IRGKNI 297 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~ 297 (527)
....+++.|+|||++.+ ..++.++|||||||++|||+||+.||.+.+.......... .....+.. .....+
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 23467899999999876 4589999999999999999999999976542211000000 00000000 000000
Q ss_pred hhhcccccCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 298 LHLMDSHLEGN----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 298 ~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.....+..... .....+.++.+|+.+||+.||.+|||++++++|-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp 286 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHS 286 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCC
Confidence 00000000000 0112345688999999999999999999999874
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=321.87 Aligned_cols=247 Identities=21% Similarity=0.221 Sum_probs=206.2
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+-.+||+|.|+.||++.... +|+.+|+|++.... ..+.+.+.+|+.|-+.|+|||||+|.+.+.+....|||+|+
T Consensus 15 l~e~igkG~FSvVrRc~~~~---tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~ 91 (355)
T KOG0033|consen 15 VKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 91 (355)
T ss_pred HHHHHccCchHHHHHHHhcc---chHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEec
Confidence 45578999999999999987 88889999987442 23567899999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC---CCceeecccCccccCCCC-
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~a~~~~~~~- 227 (527)
|+|++|..-+.. .-.+++..+-.+++||+++|.|+|.++ |||||+||+|+|+... --+||+|||+|....++.
T Consensus 92 m~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~ 168 (355)
T KOG0033|consen 92 VTGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA 168 (355)
T ss_pred ccchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence 999999877753 355789999999999999999999999 9999999999999533 359999999999887553
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc--
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS-- 303 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 303 (527)
...|||.|||||++...+|+..+|||+.|||||-|+.|.+||.+.+... . ...|...
T Consensus 169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--------------l-----ye~I~~g~y 229 (355)
T KOG0033|consen 169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--------------L-----YEQIKAGAY 229 (355)
T ss_pred cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--------------H-----HHHHhcccc
Confidence 4578999999999999999999999999999999999999997643110 0 1111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...++.....+++..+|+++||..||++|.|+.|+|+|-+-.
T Consensus 230 d~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~ 271 (355)
T KOG0033|consen 230 DYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWIC 271 (355)
T ss_pred CCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhc
Confidence 122223345678899999999999999999999999987643
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=340.98 Aligned_cols=252 Identities=27% Similarity=0.391 Sum_probs=205.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCC--CCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
..+++.||+|+||.||+|...... ...+.||+|.++...... ...|.+|+.++.+++||||+++++++......+++
T Consensus 7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 86 (283)
T cd05048 7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCML 86 (283)
T ss_pred cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEE
Confidence 447888999999999999876521 234679999987544222 35689999999999999999999999998999999
Q ss_pred EEecCCCCHhHHhhhcCC--------------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCcee
Q 009750 149 AEYMPNDTLAKHLFHWEN--------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRL 214 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl 214 (527)
|||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ ++|+||||+|||+++++.+||
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~L 165 (283)
T cd05048 87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKI 165 (283)
T ss_pred EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcEEE
Confidence 999999999999974321 45888999999999999999999999 999999999999999999999
Q ss_pred ecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhh
Q 009750 215 SCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFG 287 (527)
Q Consensus 215 ~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 287 (527)
+|||++...... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~------------ 233 (283)
T cd05048 166 SDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ------------ 233 (283)
T ss_pred CCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH------------
Confidence 999998764322 22345778999999988899999999999999999998 99888653211
Q ss_pred HHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 288 ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.....+........+..++..+.+|+.+||+.||.+||++.+++++|+.
T Consensus 234 --------~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 234 --------EVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred --------HHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1111111112222345567789999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-43 Score=340.46 Aligned_cols=265 Identities=18% Similarity=0.214 Sum_probs=202.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+++.||+|+||+||+|+++. +++.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 3 FEVLGVVGEGAYGVVLKCRHKE---TKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred ceEEEEecccCCEEEEEEEECC---CCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 4467888999999999999987 788999999875432 22457889999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||++++.|..+.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 80 EYVEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred ecCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccc
Confidence 9999877765543 3457899999999999999999999999 999999999999999999999999999765432
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc----ccchhhHHHHH-hcCcchh
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP----IKFNFGALDMI-RGKNILH 299 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~ 299 (527)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||+..+........ ........... .......
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07848 157 NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG 236 (287)
T ss_pred cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcc
Confidence 2346789999999999888999999999999999999999999765421100000 00000000000 0000000
Q ss_pred hcccccC------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 300 LMDSHLE------GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 300 ~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
....... ..+....+..+.+|+.+||+.||++|||++++++|-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp 285 (287)
T cd07848 237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285 (287)
T ss_pred cccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCC
Confidence 0000000 001122456799999999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=355.71 Aligned_cols=247 Identities=18% Similarity=0.149 Sum_probs=199.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||.|+||.||++.... +++.||||++.+... ...+.+.+|++++++++|||||++++++.+...+|||
T Consensus 3 y~~~~~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 3 FHTVKVIGKGAFGEVRLVQKKD---TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred ceEeEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence 3467889999999999999987 889999999865421 2235688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 80 MEFLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 99999999999997 4467899999999999999999999999 999999999999999999999999998532110
Q ss_pred -------------------------------------------------CccccCCccCCcccccCCcCCCCcccchhhH
Q 009750 227 -------------------------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGT 257 (527)
Q Consensus 227 -------------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv 257 (527)
....||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0245899999999999889999999999999
Q ss_pred HHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCC--HHHHHHHHHHHHHhcccCCCCC---
Q 009750 258 VLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS--SEEATVVFDLASRCLQYEPRER--- 332 (527)
Q Consensus 258 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~dp~~R--- 332 (527)
++|||++|..||...+... ... .+........++ ...+..+.+|+.+||. +|.+|
T Consensus 237 il~elltG~~Pf~~~~~~~-----------~~~--------~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r 296 (377)
T cd05629 237 IMFECLIGWPPFCSENSHE-----------TYR--------KIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGR 296 (377)
T ss_pred hhhhhhcCCCCCCCCCHHH-----------HHH--------HHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCC
Confidence 9999999999986543110 000 011000001111 1245678899999997 77765
Q ss_pred CCHHHHHHHhcc
Q 009750 333 PNTKDLVSTLAP 344 (527)
Q Consensus 333 pt~~~vl~~L~~ 344 (527)
+++.+++.|.+.
T Consensus 297 ~~~~~~l~hp~~ 308 (377)
T cd05629 297 GGAHEIKSHPFF 308 (377)
T ss_pred CCHHHHhcCCCc
Confidence 599999998653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=341.57 Aligned_cols=251 Identities=22% Similarity=0.271 Sum_probs=206.8
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
+.++||+|-||.|..|... .+..||||.++...... ..+|.+||++|.+|+|||||+|+|+|..++.++||+|||
T Consensus 542 ~~ekiGeGqFGEVhLCeve----g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVE----GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hhhhhcCcccceeEEEEec----CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 6678999999999999986 46889999999876544 478999999999999999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCcc---
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY--- 229 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--- 229 (527)
++|+|.+++..+....+.-....+|+.||+.||+||.+.+ +|||||.++|+|+|.++++||+|||+++....+..+
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq 696 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ 696 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeee
Confidence 9999999998654455566777889999999999999999 999999999999999999999999999976655432
Q ss_pred ---ccCCccCCcccccCCcCCCCcccchhhHHHHHHHh--CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 230 ---STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS--GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 230 ---~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
+-.+.|||||.+..+++++++|||+|||++||+++ ...||...... ..-++...+++..
T Consensus 697 gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e----------------~vven~~~~~~~~ 760 (807)
T KOG1094|consen 697 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE----------------QVVENAGEFFRDQ 760 (807)
T ss_pred cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH----------------HHHHhhhhhcCCC
Confidence 33588999999999999999999999999999865 66776432111 0001111111111
Q ss_pred ---cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 305 ---LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 305 ---~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.-...|..++..+.+|+.+||..|-++||+++++..+|+..
T Consensus 761 ~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 761 GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11223566778899999999999999999999999988753
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-44 Score=346.35 Aligned_cols=247 Identities=21% Similarity=0.258 Sum_probs=209.8
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+||.|+||-||-+++.. +...||||++.-..... ..++..||..|++|+|||+|.+.|+|..+...||||||
T Consensus 31 LrEIGHGSFGAVYfArd~~---n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHhcCCccceeEEeeccC---ccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 5678999999999999998 78899999998766555 34789999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCcccc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST 231 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 231 (527)
|-| +-.++|.- ...++.+.++..|+.+.+.||.|||+.+ .||||||..||||++.|.|||+|||.|....+..+++|
T Consensus 108 ClG-SAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvG 184 (948)
T KOG0577|consen 108 CLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVG 184 (948)
T ss_pred Hhc-cHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccC
Confidence 965 77777743 4568999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CCccCCcccccC---CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 232 NLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 232 t~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
||+|||||+++. +.|+.++||||||++..||.-.++|.+..+ ++.. +..|.......-
T Consensus 185 TPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN--------------AMSA-----LYHIAQNesPtL 245 (948)
T KOG0577|consen 185 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------------AMSA-----LYHIAQNESPTL 245 (948)
T ss_pred CccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch--------------HHHH-----HHHHHhcCCCCC
Confidence 999999999854 679999999999999999999999865432 1111 112221111111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
...+.+..+..|+..||++-|.+|||.++++.|-.-..
T Consensus 246 qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 246 QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 24567888999999999999999999999999865433
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=364.76 Aligned_cols=248 Identities=18% Similarity=0.193 Sum_probs=203.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+...||+|+||.||+|..... .++.||+|.+..........+.+|+.+|+.++|||||++++++...+..+||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~--~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSD--PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCC--CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 356778899999999999988762 267899998765543334568889999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 151 YMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|+++|+|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999999988542 3456899999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... .. ..+..
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-----------~~--------~~~~~ 285 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-----------IM--------QQVLY 285 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HH--------HHHHh
Confidence 24468999999999998899999999999999999999999986532110 00 01111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.. ...++...+..+.+||.+||+.||++||++.+++.+
T Consensus 286 ~~-~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 286 GK-YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CC-CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 11 112233455678999999999999999999999865
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-43 Score=343.62 Aligned_cols=245 Identities=22% Similarity=0.231 Sum_probs=209.8
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv 148 (527)
.+...||+|.||.||+|+.+. +|+.+|+|++.+..... .+.+.+|+.+|+++. |||||.++++|++...+++|
T Consensus 38 ~l~~~lG~G~Fg~v~~~~~~~---tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 38 ELGRELGRGQFGVVYLCREKS---TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred EehhhhCCCCceEEEEEEecC---CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 344588999999999999998 79999999998775433 468999999999998 99999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC----CCceeecccCccccC
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN----GDPRLSCFGLMKNSR 224 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~----~~~kl~DFG~a~~~~ 224 (527)
||+|.||.|.+.+... .+++..+..++.||+.++.|||+.| |+||||||+|+|+... +.+|++|||++....
T Consensus 115 mEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999999999999854 3999999999999999999999999 9999999999999533 579999999999877
Q ss_pred CC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 225 DG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 225 ~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
.. ...+||+.|+|||++....|+..+||||+||++|.|++|.+||.+...... ...+.
T Consensus 191 ~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~-------------------~~~i~ 251 (382)
T KOG0032|consen 191 PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI-------------------FLAIL 251 (382)
T ss_pred CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-------------------HHHHH
Confidence 63 356899999999999999999999999999999999999999976532111 11121
Q ss_pred cc--ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 302 DS--HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 302 ~~--~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.. ..........+..+.++|.+||..||.+|+|+.++|+|.|
T Consensus 252 ~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 252 RGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred cCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 11 1222333456788999999999999999999999999865
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=350.84 Aligned_cols=241 Identities=21% Similarity=0.256 Sum_probs=199.7
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
.||+|+||.||++.+.. +++.||+|+++.... .....+.+|+.++..++||||+++++++.....++|||||++
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 78 (325)
T cd05594 2 LLGKGTFGKVILVKEKA---TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 78 (325)
T ss_pred eeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 46999999999999887 889999999976432 223567889999999999999999999999999999999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
+|+|..++. ....+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (325)
T cd05594 79 GGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 155 (325)
T ss_pred CCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccc
Confidence 999999886 44578999999999999999999997 67 99999999999999999999999999875322 124
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||+||+.||...+... .... +... ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~-----------~~~~--------i~~~--~~~ 214 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-----------LFEL--------ILME--EIR 214 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH-----------HHHH--------HhcC--CCC
Confidence 568999999999998899999999999999999999999986532110 0000 0000 112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
++...++.+.+|+.+||+.||++|+ ++.++++|.+.
T Consensus 215 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~ 255 (325)
T cd05594 215 FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFF 255 (325)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCc
Confidence 3334556789999999999999997 89999988653
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-43 Score=334.90 Aligned_cols=249 Identities=21% Similarity=0.350 Sum_probs=206.3
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
..+.+.||.|+||.||+|.+.+ +++.||+|++.... ...+.+.+|+++++.++||||+++++++.....+++||||
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred eEEeeecCCcccceEEEEEEec---CCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 3466788999999999999987 78889999987543 3356799999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc---
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS--- 228 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--- 228 (527)
+++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++........
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~ 162 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 162 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence 99999999997545567899999999999999999999999 99999999999999999999999999876544321
Q ss_pred --cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 229 --YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 229 --~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...+..|+|||.+.+..++.++|||||||++|||++ |..||++.+... .... +....
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-----------~~~~---------~~~~~ 222 (263)
T cd05052 163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----------VYEL---------LEKGY 222 (263)
T ss_pred CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----------HHHH---------HHCCC
Confidence 123567999999998899999999999999999998 888886542110 0111 11112
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
....+...+..+.+++.+||..||++|||+.++++.|+.+
T Consensus 223 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 223 RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 2233444567799999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=356.04 Aligned_cols=249 Identities=19% Similarity=0.136 Sum_probs=201.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||.|+||+||+|++.. +++.||||++..... .....+.+|+.+|..++||||+++++++.+...++||
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 3 FESIKVIGRGAFGEVRLVQKKD---TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred ceEEEEEEecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence 4467888999999999999987 788999999975422 2235688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 80 ~E~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 80 MEYLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred ECCCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 99999999999997 3457999999999999999999999999 999999999999999999999999998643211
Q ss_pred ----------------------------------------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCC
Q 009750 227 ----------------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK 266 (527)
Q Consensus 227 ----------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~ 266 (527)
...+||+.|+|||++.+..++.++|||||||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 1235899999999999889999999999999999999999
Q ss_pred CCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHhc
Q 009750 267 HIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN---TKDLVSTLA 343 (527)
Q Consensus 267 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt---~~~vl~~L~ 343 (527)
.||...+... ........ ...+........++.+.+||.+||. +|.+|++ +.+++.|-+
T Consensus 237 ~Pf~~~~~~~-----------~~~~i~~~------~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~ 298 (364)
T cd05599 237 PPFCSDNPQE-----------TYRKIINW------KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPF 298 (364)
T ss_pred CCCCCCCHHH-----------HHHHHHcC------CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCC
Confidence 9986543110 00000000 0001101111235678899999996 9999997 999998854
Q ss_pred c
Q 009750 344 P 344 (527)
Q Consensus 344 ~ 344 (527)
.
T Consensus 299 ~ 299 (364)
T cd05599 299 F 299 (364)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-43 Score=344.85 Aligned_cols=243 Identities=19% Similarity=0.263 Sum_probs=198.3
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHh---hcCCCCccceeEEEEEeCCeee
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGV---GKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l---~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
.+++.||+|+||.||+|.+.. +++.||||++++... ...+.+.+|+.++ +.++||||+++++++...+..|
T Consensus 2 ~i~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~ 78 (324)
T cd05589 2 RCLAVLGRGHFGKVLLAEYKK---TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC 78 (324)
T ss_pred eEEEEEeecCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE
Confidence 367788999999999999987 788999999975431 2234577776655 5668999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC-
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~- 225 (527)
+||||+++|+|..++. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 79 lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 79 FVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 9999999999998884 357999999999999999999999999 99999999999999999999999999875322
Q ss_pred ---CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 ---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+... ... .+..
T Consensus 155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~-----------~~~--------~i~~ 215 (324)
T cd05589 155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE-----------VFD--------SIVN 215 (324)
T ss_pred CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH-----------HHH--------HHHh
Confidence 234568999999999999899999999999999999999999986543111 000 1111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLA 343 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~ 343 (527)
. ...++...+..+.+++.+||+.||.+|| ++.+++++.+
T Consensus 216 ~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~ 259 (324)
T cd05589 216 D--EVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPF 259 (324)
T ss_pred C--CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCC
Confidence 1 1123344566788999999999999999 6788888753
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-43 Score=344.63 Aligned_cols=255 Identities=18% Similarity=0.264 Sum_probs=202.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCC-CCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.++..||+|+||.||+|.+.... .....||||+++.... ...+++.+|+.+++.++||||++++|+|... ..++|+
T Consensus 9 f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~ 87 (316)
T cd05108 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIT 87 (316)
T ss_pred ceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceeee
Confidence 446778899999999999976521 1234599999875432 2346799999999999999999999999764 578999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc-
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS- 228 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 228 (527)
||+++|+|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 88 e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 165 (316)
T cd05108 88 QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE 165 (316)
T ss_pred ecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCcc
Confidence 99999999999974 3456889999999999999999999999 99999999999999999999999999986543321
Q ss_pred -----cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 229 -----YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 229 -----~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
..++..|+|||++.+..++.++|||||||++|||++ |+.||.+..... +..++.
T Consensus 166 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--------------------~~~~~~ 225 (316)
T cd05108 166 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------------------ISSILE 225 (316)
T ss_pred eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--------------------HHHHHh
Confidence 223567999999999999999999999999999998 888875432110 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
.......+..++..+.+++.+||..||.+||++.+++..|..+...+
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 226 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 11111223334566889999999999999999999999998876544
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=347.72 Aligned_cols=243 Identities=20% Similarity=0.233 Sum_probs=199.2
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
+.||+|+||.||++....+..+++.||||++...... ....+.+|++++++++||||+++++++..++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5679999999999987544447899999999764322 23467889999999999999999999999999999999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Ccc
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSY 229 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~~ 229 (527)
+|+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 999999996 4457899999999999999999999999 999999999999999999999999998764332 245
Q ss_pred ccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCC
Q 009750 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (527)
.||+.|+|||++.+..++.++|||||||++|||++|+.||...+... .. ..+... ...+
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-----------~~--------~~i~~~--~~~~ 217 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE-----------TM--------TMILKA--KLGM 217 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH-----------HH--------HHHHcC--CCCC
Confidence 68999999999998889999999999999999999999986532110 00 011111 1123
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHh
Q 009750 310 SSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTL 342 (527)
Q Consensus 310 ~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L 342 (527)
+...+..+.+|+.+||+.||.+||+ +.+++.+.
T Consensus 218 p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~ 255 (318)
T cd05582 218 PQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHP 255 (318)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCC
Confidence 3445667889999999999999999 55566553
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=340.69 Aligned_cols=258 Identities=22% Similarity=0.267 Sum_probs=197.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCC-------------CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGN-------------DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIG 137 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~-------------~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~ 137 (527)
+.+.+.||+|+||.||+|.+..+. .++..||||.+...... ...+|.+|+.++.+++||||+++++
T Consensus 7 ~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 86 (304)
T cd05096 7 LLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLG 86 (304)
T ss_pred CeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEE
Confidence 446778899999999999864321 14457999998765322 2457999999999999999999999
Q ss_pred EEEeCCeeeEEEEecCCCCHhHHhhhcC-----------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccC
Q 009750 138 YCCDGDERLLVAEYMPNDTLAKHLFHWE-----------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN 200 (527)
Q Consensus 138 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlk 200 (527)
++.+.+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ ++|||||
T Consensus 87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dlk 165 (304)
T cd05096 87 VCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLA 165 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCcc
Confidence 9999999999999999999999986421 124688899999999999999999999 9999999
Q ss_pred CCceEeCCCCCceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhC--CCCCCCC
Q 009750 201 AYRVLFDENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG--KHIPPSH 272 (527)
Q Consensus 201 p~NIll~~~~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg--~~p~~~~ 272 (527)
|+|||++.++.+||+|||+++...... ...++..|+|||++.++.++.++|||||||++|||+++ ..||...
T Consensus 166 p~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 245 (304)
T cd05096 166 TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL 245 (304)
T ss_pred hhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC
Confidence 999999999999999999997654322 23346789999999888999999999999999999975 4455432
Q ss_pred CccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 273 DMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
+.... ........... . .......+..++..+.+|+.+||+.||++|||+.+|.+.|+
T Consensus 246 ~~~~~-------~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 246 TDEQV-------IENAGEFFRDQ-G-----RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CHHHH-------HHHHHHHhhhc-c-----ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 11000 00000000000 0 00011122344567899999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=349.85 Aligned_cols=261 Identities=18% Similarity=0.160 Sum_probs=200.0
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+.+++.||+|+||.||+|.+.. +++.||||... ...+.+|+.+|++|+|||||++++++......++||
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~---~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNK---TCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECC---CCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 346688899999999999999987 88899999753 245789999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---- 225 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~---- 225 (527)
|++. ++|..++. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++....
T Consensus 163 e~~~-~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 163 PRYK-TDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred ecCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 9995 68988886 3457899999999999999999999999 99999999999999999999999999865322
Q ss_pred -CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc---------------cccchhhHH
Q 009750 226 -GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV---------------PIKFNFGAL 289 (527)
Q Consensus 226 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~---------------~~~~~~~~~ 289 (527)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||...+....... +..+.....
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 1235789999999999988999999999999999999999988754321110000 000000000
Q ss_pred HHHhcCcchhhccc-----ccCCCC--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 290 DMIRGKNILHLMDS-----HLEGNF--SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 290 ~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.... ......... ..+..+ ....+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 319 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f 379 (391)
T PHA03212 319 ANLD-EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAF 379 (391)
T ss_pred HHHH-HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhh
Confidence 0000 000000000 000000 01245678999999999999999999999987654
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-44 Score=342.36 Aligned_cols=248 Identities=28% Similarity=0.480 Sum_probs=196.5
Q ss_pred ccccCCCCCCCeEEEEEec-CCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQ-DGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~-~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+.||.|.||.||+|.+. .....+..|+||.++..... ..+.|.+|++++++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4567899999999999998 44447888999999654322 256899999999999999999999999988889999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----- 226 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----- 226 (527)
+++|+|.++|.......+++..+..|+.||++||.|||+++ ++|+||+++|||+++++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 99999999998655678999999999999999999999998 999999999999999999999999999876322
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
........|+|||.+.+..++.++||||||+++|||++ |+.|+...+.. .+...+...
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~--------------------~~~~~~~~~ 221 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE--------------------EIIEKLKQG 221 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH--------------------HHHHHHHTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc--------------------ccccccccc
Confidence 12345678999999998889999999999999999999 67776543111 011111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.....+..++..+.+++.+||..||.+|||+.++++.|
T Consensus 222 ~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 222 QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp EETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 12223444566788999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=341.28 Aligned_cols=268 Identities=20% Similarity=0.223 Sum_probs=199.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||.|+||.||+|.... +++.||||++...... ....+.+|+.+++.++||||+++++++.+....++||
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 6 SYEKLEKLGEGSYATVYKGKSKV---NGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cceEeeeEEecCCEEEEEEEECC---CCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 35578889999999999999987 7889999999755322 2346889999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 83 e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 159 (303)
T cd07869 83 EYVH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT 159 (303)
T ss_pred ECCC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc
Confidence 9996 588888764 3456899999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhh--HHHHHhc-Ccchhhc
Q 009750 227 -KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG--ALDMIRG-KNILHLM 301 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~ 301 (527)
....+|+.|+|||++.+. .++.++|||||||++|||++|..||.+................ ....+.. .......
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T cd07869 160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK 239 (303)
T ss_pred CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence 234678999999998764 5788999999999999999999999764321100000000000 0000000 0000000
Q ss_pred ccccCCCCCH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 302 DSHLEGNFSS---------EEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 302 ~~~~~~~~~~---------~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
........+. ..+..+.+|+.+||+.||++|||+.++++|-..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f 291 (303)
T cd07869 240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYF 291 (303)
T ss_pred cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccc
Confidence 0000000000 123567899999999999999999999988654
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=353.91 Aligned_cols=247 Identities=22% Similarity=0.213 Sum_probs=204.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||+|.+.. +++.||||+++.... .....+.+|++++..++||||+++++++.+.+..++|
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 3 FEVIKVIGRGAFGEVWLVRDKD---TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred ceEEEEEEeCCcEEEEEEEECC---CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence 4477889999999999999987 789999999975432 2345789999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 80 MEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred EcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999999974 367999999999999999999999999 9999999999999999999999999987644322
Q ss_pred --------------------------------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcc
Q 009750 228 --------------------------------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMV 275 (527)
Q Consensus 228 --------------------------------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~ 275 (527)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 346789999999999999999999999999999999999998754311
Q ss_pred ccccccccchhhHHHHHhcCcchhhcc--cccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHhcc
Q 009750 276 VWNTVPIKFNFGALDMIRGKNILHLMD--SHLEGNFSSEEATVVFDLASRCLQYEPRERPN-TKDLVSTLAP 344 (527)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-~~~vl~~L~~ 344 (527)
. .. ..+.. .....+.....++.+.+||.+||. ||.+||+ +.++++|.+.
T Consensus 237 ~-----------~~--------~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~ 288 (350)
T cd05573 237 E-----------TY--------NKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFF 288 (350)
T ss_pred H-----------HH--------HHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCc
Confidence 0 00 01111 111111111246778899999997 9999999 9999998653
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=344.60 Aligned_cols=268 Identities=20% Similarity=0.237 Sum_probs=204.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+++.||.|+||.||++.+.. +++.+|+|.+...... ..+.+.+|+++++.++||||++++++|...+..++|||
T Consensus 7 y~~~~~lg~g~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 7 FEKISELGAGNGGVVFKVSHKP---SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hheeccccCCCCEEEEEEEECC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 4477889999999999999987 7888999998765322 23579999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--Cc
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KS 228 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~ 228 (527)
|+++|+|.+++. ....+++..+..++.+|+.||.|||+.+.++||||||+|||++.++.+||+|||++...... ..
T Consensus 84 ~~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 161 (333)
T cd06650 84 HMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 161 (333)
T ss_pred cCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcccc
Confidence 999999999997 34568999999999999999999998533999999999999999999999999998754332 34
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc---------------c-ccchhhHHHHH
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV---------------P-IKFNFGALDMI 292 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~---------------~-~~~~~~~~~~~ 292 (527)
..+|..|+|||++.+..++.++|||||||++|||++|+.||...+....... . ...........
T Consensus 162 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (333)
T cd06650 162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSY 241 (333)
T ss_pred CCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhh
Confidence 5688999999999988899999999999999999999999875432110000 0 00000000000
Q ss_pred hc-----Ccchhhccc---ccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 293 RG-----KNILHLMDS---HLEGNFS-SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 293 ~~-----~~~~~~~~~---~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.. .....+... ......+ ...+..+.+|+.+||+.||++|||+.+++.|-..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~ 302 (333)
T cd06650 242 GPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFI 302 (333)
T ss_pred cccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHH
Confidence 00 000000000 0001111 1234668999999999999999999999988654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=355.43 Aligned_cols=250 Identities=18% Similarity=0.140 Sum_probs=201.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+++.||+|+||.||++++.. +++.||||++.+... .....+.+|+++|+.++||||+++++.+.+++.++|
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 78 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVD---TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYF 78 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECC---CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEE
Confidence 45688899999999999999987 789999999875321 234568899999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC---
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR--- 224 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~--- 224 (527)
||||+++|+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 79 v~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 79 VMDYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred EEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999999997 4457899999999999999999999999 9999999999999999999999999974211
Q ss_pred --------------------------------------------CCCccccCCccCCcccccCCcCCCCcccchhhHHHH
Q 009750 225 --------------------------------------------DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLL 260 (527)
Q Consensus 225 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ 260 (527)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 001246899999999999989999999999999999
Q ss_pred HHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCC---CHHH
Q 009750 261 DLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP---NTKD 337 (527)
Q Consensus 261 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---t~~~ 337 (527)
||++|+.||.+.+.... ....... ............+..+.++|.+|+ .+|.+|+ ++.+
T Consensus 236 ell~G~~Pf~~~~~~~~-----------~~~i~~~------~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~e 297 (376)
T cd05598 236 EMLVGQPPFLADTPAET-----------QLKVINW------ETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADE 297 (376)
T ss_pred ehhhCCCCCCCCCHHHH-----------HHHHhcc------CccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence 99999999976432110 0000000 000111111234566788999976 5999999 8999
Q ss_pred HHHHhcc
Q 009750 338 LVSTLAP 344 (527)
Q Consensus 338 vl~~L~~ 344 (527)
+++|-+.
T Consensus 298 ll~h~~~ 304 (376)
T cd05598 298 IKAHPFF 304 (376)
T ss_pred HhCCCCc
Confidence 9998553
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-43 Score=352.87 Aligned_cols=250 Identities=20% Similarity=0.180 Sum_probs=203.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
...+.+++.||+|+||.||++.... +++.||||++.+.. ....+.+.+|+.+++.++||||+++++++.+...+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKS---SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 3456678889999999999999987 78899999997532 12334588999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999999853 45888999999999999999999999 99999999999999999999999999876543
Q ss_pred C-----CccccCCccCCcccccCC----cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 226 G-----KSYSTNLAYTPPEYLRNG----RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 226 ~-----~~~~~t~~y~aPE~~~~~----~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
. ....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+... .
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-----------~-------- 255 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-----------T-------- 255 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-----------H--------
Confidence 2 245689999999998653 37889999999999999999999997543210 0
Q ss_pred chhhcccccCCCCC--HHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhcc
Q 009750 297 ILHLMDSHLEGNFS--SEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~dp~~--Rpt~~~vl~~L~~ 344 (527)
...+........++ ...+..+.+||.+||..+|.+ |+++.+++.|-+.
T Consensus 256 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~ 307 (370)
T cd05596 256 YSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFF 307 (370)
T ss_pred HHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCccc
Confidence 11111111111122 134677899999999999988 9999999998654
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=350.69 Aligned_cols=256 Identities=20% Similarity=0.263 Sum_probs=203.3
Q ss_pred cccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 146 (527)
...+++.||+|+||.||+|.+... ...+..||||+++..... ..+.+.+|+.+|+++. |||||+++++|.+....+
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~ 117 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIY 117 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceE
Confidence 344677899999999999987432 113457999999765432 2457999999999995 999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcC-------------------------------------------------------------
Q 009750 147 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 165 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~------------------------------------------------------------- 165 (527)
|||||+++|+|.++|..+.
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T cd05105 118 IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEA 197 (400)
T ss_pred EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhh
Confidence 9999999999999886421
Q ss_pred ---------------------------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCc
Q 009750 166 ---------------------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212 (527)
Q Consensus 166 ---------------------------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~ 212 (527)
...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~ 276 (400)
T cd05105 198 SKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIV 276 (400)
T ss_pred hhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEE
Confidence 124788889999999999999999999 9999999999999999999
Q ss_pred eeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccch
Q 009750 213 RLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 213 kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 285 (527)
||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..||+......
T Consensus 277 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~--------- 347 (400)
T cd05105 277 KICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS--------- 347 (400)
T ss_pred EEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH---------
Confidence 999999987643321 2345678999999998889999999999999999997 888876431100
Q ss_pred hhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.+...+........+...+..+.+|+.+||+.||++|||+.++.+.|+.+.
T Consensus 348 ----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 348 ----------TFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred ----------HHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 000111111112233445677899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-43 Score=346.72 Aligned_cols=250 Identities=18% Similarity=0.209 Sum_probs=199.9
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||.||+|.+.. +++.||||++++.... ..+.+.+|+.++..+ +||||+++++++.....++|||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~ 78 (329)
T cd05588 2 VIGRGSYAKVLLVELKK---TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFV 78 (329)
T ss_pred eEeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCC
Confidence 46999999999999987 7889999999865322 234688999999999 7999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC----CCCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----DGKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~----~~~~ 228 (527)
++|+|..++. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++... ....
T Consensus 79 ~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (329)
T cd05588 79 SGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST 155 (329)
T ss_pred CCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCcccc
Confidence 9999999886 4467999999999999999999999999 9999999999999999999999999987422 1234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|+.||............ ....... .+.... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~--~~~~~~~--------~~~~~~--~~ 223 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQN--TEDYLFQ--------VILEKQ--IR 223 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccccccc--chHHHHH--------HHHcCC--CC
Confidence 57899999999999989999999999999999999999998643211100000 0000000 111111 12
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHHhcc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPN------TKDLVSTLAP 344 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt------~~~vl~~L~~ 344 (527)
.+...+..+.+|+.+||+.||.+|++ +.++++|-+.
T Consensus 224 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~ 265 (329)
T cd05588 224 IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFF 265 (329)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCC
Confidence 33445567899999999999999997 6788877543
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=352.47 Aligned_cols=247 Identities=17% Similarity=0.113 Sum_probs=196.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||+|.... +++.||||++++... .....+.+|+.++.+++||||+++++.+.+...++||
T Consensus 3 y~~~~~LG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 3 FESLKVIGRGAFGEVRLVQKKD---TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred ceEeEEEEeCCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence 3467788999999999999987 788999999975432 2235688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++|+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++.....
T Consensus 80 ~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 80 MEFLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred EcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 99999999999997 4567999999999999999999999999 999999999999999999999999998643211
Q ss_pred -------------------------------------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCC
Q 009750 227 -------------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP 269 (527)
Q Consensus 227 -------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~ 269 (527)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 1346899999999999999999999999999999999999999
Q ss_pred CCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCC--HHHHHHHHHHHHHhcc--cCCCCCCCHHHHHHHhc
Q 009750 270 PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS--SEEATVVFDLASRCLQ--YEPRERPNTKDLVSTLA 343 (527)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~--~dp~~Rpt~~~vl~~L~ 343 (527)
.+.+... ... .+........++ ...+..+.+|+.+++. .++..||+++++++|-+
T Consensus 237 ~~~~~~~-----------~~~--------~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~ 295 (363)
T cd05628 237 CSETPQE-----------TYK--------KVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPF 295 (363)
T ss_pred CCCCHHH-----------HHH--------HHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCC
Confidence 6542110 000 111000000111 1234567888888654 23345689999999843
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=339.89 Aligned_cols=249 Identities=24% Similarity=0.373 Sum_probs=214.6
Q ss_pred ccCCCCCCCeEEEEEecCCC-CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 76 SESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~-~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
..||.|-||.||+|...+.. ...-.||||..+.+... +.+.|..|..+|++++|||||+|+|+|.+ ...+||||+++
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~ 473 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAP 473 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEeccc
Confidence 46799999999999987642 13345999999886543 46779999999999999999999999975 56899999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCcccc--
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-- 231 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-- 231 (527)
-|.|..+|+. +...++......++.||+.||.|||+.. .|||||..+|||+...-.+||+|||+++...+..-+..
T Consensus 474 ~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~ 551 (974)
T KOG4257|consen 474 LGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASR 551 (974)
T ss_pred chhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhccc
Confidence 9999999975 5667999999999999999999999998 99999999999999999999999999998877643322
Q ss_pred ---CCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 232 ---NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 232 ---t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
.+-|||||.+....++.++|||.|||.+||+++ |..||.+- .+.++...+...-+.
T Consensus 552 ~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgv--------------------kNsDVI~~iEnGeRl 611 (974)
T KOG4257|consen 552 GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGV--------------------KNSDVIGHIENGERL 611 (974)
T ss_pred cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccc--------------------cccceEEEecCCCCC
Confidence 356999999999999999999999999999987 88999763 234444455566677
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+.|+.|++.+..|+.+||+.||.+||++.++...|..+..
T Consensus 612 P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 612 PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999988876643
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=345.13 Aligned_cols=240 Identities=16% Similarity=0.206 Sum_probs=198.5
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||.||+|.+.. +++.||||+++.... ...+.+..|++++..+ +||||+++++++...+.++|||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~ 78 (321)
T cd05591 2 VLGKGSFGKVMLAELKG---TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYV 78 (321)
T ss_pred ccccCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCC
Confidence 47999999999999987 788999999976432 2345678899999877 8999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... ...
T Consensus 79 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05591 79 NGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT 155 (321)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCccccc
Confidence 9999999886 4467899999999999999999999999 99999999999999999999999999875322 234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+... .. ..+.... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-----------~~--------~~i~~~~--~~ 214 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-----------LF--------ESILHDD--VL 214 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-----------HH--------HHHHcCC--CC
Confidence 568999999999998899999999999999999999999997543111 00 1111111 11
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC-------CHHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERP-------NTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rp-------t~~~vl~~L~ 343 (527)
++...+..+.+|+.+||+.||.+|| ++.++++|-.
T Consensus 215 ~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~ 256 (321)
T cd05591 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPF 256 (321)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCc
Confidence 2333456788999999999999999 8888888754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-43 Score=343.60 Aligned_cols=239 Identities=21% Similarity=0.287 Sum_probs=195.2
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||.||+|.+.. +++.||||+++.... ...+.+..|..++..+ +||||+++++++...+..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~ 78 (316)
T cd05592 2 VLGKGSFGKVMLAELKG---TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYL 78 (316)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence 47999999999999987 788999999976421 2334567777777755 8999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~gg~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~ 155 (316)
T cd05592 79 NGGDLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155 (316)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccc
Confidence 9999999986 3457899999999999999999999999 99999999999999999999999999875422 234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+... ... .+.. ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~-----------~~~--------~i~~--~~~~ 214 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE-----------LFD--------SILN--DRPH 214 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH-----------HHH--------HHHc--CCCC
Confidence 568999999999998899999999999999999999999987543110 000 0100 1122
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHh
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTK-DLVSTL 342 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~-~vl~~L 342 (527)
++...+..+.+|+.+||+.||.+||++. ++++|-
T Consensus 215 ~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~ 249 (316)
T cd05592 215 FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHP 249 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCc
Confidence 3444566788999999999999999875 565553
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=345.13 Aligned_cols=240 Identities=20% Similarity=0.251 Sum_probs=197.9
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||+||+|.++. +++.||||++++.. ....+.+..|+.++..+ +||||+++++++...+.+++||||+
T Consensus 2 ~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~ 78 (320)
T cd05590 2 VLGKGSFGKVMLARLKE---SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFV 78 (320)
T ss_pred eeeeCCCeEEEEEEEcC---CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCC
Confidence 47999999999999987 78899999987542 22345678899999877 7999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|..++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (320)
T cd05590 79 NGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST 155 (320)
T ss_pred CCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccc
Confidence 9999999886 4467999999999999999999999999 99999999999999999999999999875321 234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ... .+.... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-----------~~~--------~i~~~~--~~ 214 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD-----------LFE--------AILNDE--VV 214 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-----------HHH--------HHhcCC--CC
Confidence 568999999999998889999999999999999999999997543111 001 111111 11
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNT------KDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~------~~vl~~L~ 343 (527)
++...+..+.+|+.+||+.||.+||++ ++++.|-+
T Consensus 215 ~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~ 255 (320)
T cd05590 215 YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPF 255 (320)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCC
Confidence 233455678999999999999999998 77777644
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=336.04 Aligned_cols=245 Identities=18% Similarity=0.229 Sum_probs=199.4
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
||+|+||+||++.+.. +++.||||++...... ..+.+..|+.+++.++||||+++.+++......++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (280)
T cd05608 1 LGKGGFGEVSACQMRA---TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNG 77 (280)
T ss_pred CCCCCceeEEEEEEcc---CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCC
Confidence 6999999999999987 7889999998754322 235678899999999999999999999999999999999999
Q ss_pred CCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Cc
Q 009750 155 DTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KS 228 (527)
Q Consensus 155 g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~ 228 (527)
|+|..++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (280)
T cd05608 78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156 (280)
T ss_pred CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccc
Confidence 9999887532 3456899999999999999999999999 999999999999999999999999998764432 23
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..+|+.|+|||++.+..++.++|||||||++|||++|+.||...+.... .... ...+... ...
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-----------~~~~----~~~~~~~--~~~ 219 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-----------NKEL----KQRILND--SVT 219 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-----------HHHH----HHhhccc--CCC
Confidence 4678999999999999999999999999999999999999865321110 0000 0011111 112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~ 343 (527)
++...+..+.+++.+||+.||++|| +++++++|-+
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~ 259 (280)
T cd05608 220 YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPL 259 (280)
T ss_pred CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChh
Confidence 3344567789999999999999999 7788888744
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-43 Score=354.16 Aligned_cols=246 Identities=17% Similarity=0.177 Sum_probs=198.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||+|+... +++.||||++.+... .....+.+|+.++++++|||||++++.+.+...++||
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVD---TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 79 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECC---CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEE
Confidence 3477889999999999999987 788999999976432 1235688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC---
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--- 225 (527)
|||+++|+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 80 ~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 80 MDYIPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999999996 3457899999999999999999999999 99999999999999999999999999742110
Q ss_pred ------------------------------------------------CCccccCCccCCcccccCCcCCCCcccchhhH
Q 009750 226 ------------------------------------------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGT 257 (527)
Q Consensus 226 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv 257 (527)
..+.+||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 01246899999999999989999999999999
Q ss_pred HHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc--cccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-
Q 009750 258 VLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD--SHLEGNFSSEEATVVFDLASRCLQYEPRERPN- 334 (527)
Q Consensus 258 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt- 334 (527)
+||||++|+.||...+.... ...+.. ...........++.+.+++.+|+ .+|.+|++
T Consensus 237 il~elltG~~Pf~~~~~~~~-------------------~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~ 296 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLET-------------------QMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGK 296 (382)
T ss_pred HHHHHHhCCCCCCCCCHHHH-------------------HHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCC
Confidence 99999999999975431100 001111 01111111234567888888876 59999987
Q ss_pred --HHHHHHHhc
Q 009750 335 --TKDLVSTLA 343 (527)
Q Consensus 335 --~~~vl~~L~ 343 (527)
+.+++.|-.
T Consensus 297 ~~~~ei~~hp~ 307 (382)
T cd05625 297 NGADEIKAHPF 307 (382)
T ss_pred CCHHHHhcCCC
Confidence 888888744
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=329.39 Aligned_cols=245 Identities=22% Similarity=0.357 Sum_probs=198.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+..+++.||+|+||.||++.++ .+..+|+|.+.... ...+.+.+|+.++++++||||+++++++......++|||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~----~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWR----AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HcEEeeEecCCcCceEEEEEec----cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 3457788999999999999886 44569999886443 345689999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05114 80 FMENGCLLNYLRQ-RQGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS 157 (256)
T ss_pred cCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence 9999999999864 2346899999999999999999999999 9999999999999999999999999987643321
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...++..|+|||++.+..++.++||||||+++|||++ |+.||...+... ........
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~-----------~~~~i~~~--------- 217 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE-----------VVEMISRG--------- 217 (256)
T ss_pred cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----------HHHHHHCC---------
Confidence 1233567999999988889999999999999999999 888875432110 01111110
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.....+...+..+.+|+.+||+.+|.+||++.++++.|
T Consensus 218 ~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 218 FRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 01111222345689999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-43 Score=346.57 Aligned_cols=252 Identities=19% Similarity=0.215 Sum_probs=202.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC----CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
+.+++.||+|+||.||++....+..+++.||+|++.+... ...+.+.+|+.++.++ +||||+++++++...+.++
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 3467889999999999998865444789999999875321 2245688999999999 5999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999997 4467899999999999999999999999 999999999999999999999999998754322
Q ss_pred -----CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 227 -----KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
....||+.|+|||++.+.. ++.++|||||||++|||+||+.||........ . ..+ ...+
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----------~-~~~----~~~~ 223 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT----------Q-SEV----SRRI 223 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC----------H-HHH----HHHH
Confidence 2356899999999998654 78899999999999999999999864321100 0 000 0001
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLA 343 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~ 343 (527)
.. ....++...+..+.+|+.+||+.||++|| +++++++|-+
T Consensus 224 ~~--~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 269 (332)
T cd05614 224 LK--CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF 269 (332)
T ss_pred hc--CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence 10 11223344566789999999999999999 7889988854
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=337.71 Aligned_cols=260 Identities=21% Similarity=0.250 Sum_probs=196.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcC---CCCccceeEEEEEe-----
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL---RHKRLANLIGYCCD----- 141 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~----- 141 (527)
+.+++.||+|+||.||+|.+... +++.||||+++..... ....+.+|+.+++.+ +||||++++++|..
T Consensus 3 Y~~~~~lg~G~~g~Vy~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 3 YECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred cceeeEeccCCCeEEEEEEEcCC--CCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 45778899999999999998542 4688999998754322 234577788887776 69999999999863
Q ss_pred CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
...+++||||++ ++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 356899999996 58999997545566899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh---cC
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR---GK 295 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 295 (527)
..... ....+|+.|+|||++.+..++.++|||||||++|||++|++||.+........ ....... ..
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~-------~i~~~~~~~~~~ 231 (290)
T cd07862 159 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG-------KILDVIGLPGEE 231 (290)
T ss_pred eccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHH-------HHHHHhCCCChh
Confidence 65432 24467899999999988889999999999999999999999997653221100 0000000 00
Q ss_pred cch-------hhcccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 296 NIL-------HLMDSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 296 ~~~-------~~~~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
... ..+...... ......+..+.+|+.+||+.||++|||+.++++|-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp 288 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 288 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCC
Confidence 000 000000000 01112356678999999999999999999999763
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-43 Score=345.30 Aligned_cols=249 Identities=18% Similarity=0.212 Sum_probs=198.4
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||.||+|.+.. +++.||+|++++.... ..+.+.+|+.++.++ +||||+++++++...+.+++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~ 78 (329)
T cd05618 2 VIGRGSYAKVLLVRLKK---TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 78 (329)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCC
Confidence 47999999999999987 7889999999865322 234678899998877 8999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|..++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (329)
T cd05618 79 NGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 155 (329)
T ss_pred CCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccc
Confidence 9999998886 4467999999999999999999999999 99999999999999999999999999875321 234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|+.||........... ........ .+... ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~--~~~~~~~~--------~i~~~--~~~ 223 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ--NTEDYLFQ--------VILEK--QIR 223 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCccc--ccHHHHHH--------HHhcC--CCC
Confidence 5689999999999999999999999999999999999999853211100000 00000000 01111 112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPN------TKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt------~~~vl~~L~ 343 (527)
+|...+..+.+|+.+||+.||.+||+ +.++++|-.
T Consensus 224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~ 264 (329)
T cd05618 224 IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 264 (329)
T ss_pred CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCC
Confidence 34455667889999999999999998 468877743
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=331.23 Aligned_cols=248 Identities=23% Similarity=0.308 Sum_probs=203.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
...++++||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.+++.++|+||+++++.+...+..++|||
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~----~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05072 7 SIKLVKKLGAGQFGEVWMGYYN----NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 81 (261)
T ss_pred HeEEeeecCCcCCceEEEEEec----CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence 4557889999999999999976 45669999987543 235789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 82 YMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred cCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 999999999997655567899999999999999999999998 9999999999999999999999999997654432
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...++..|+|||++.+..++.++|||||||++|+|+| |..||....... ....... .
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-----------~~~~~~~---------~ 220 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-----------VMSALQR---------G 220 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-----------HHHHHHc---------C
Confidence 1234567999999988889999999999999999998 888886532110 0011110 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.........+..+.+++.+||..+|++||+++++++.|+.
T Consensus 221 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 221 YRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1111122345668899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=349.47 Aligned_cols=249 Identities=20% Similarity=0.190 Sum_probs=201.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||.||++.+.. +++.||+|++.+... ...+.+.+|+.+++.++||||+++++++.++..++
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKS---SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 446678889999999999999987 788999999865321 22346889999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 120 MVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 99999999999999953 45889999999999999999999999 999999999999999999999999999865432
Q ss_pred -----CccccCCccCCcccccCC----cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 227 -----KSYSTNLAYTPPEYLRNG----RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~----~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
.+..||+.|+|||++.+. .++.++|||||||++|||++|+.||...+... ..
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~-------------------~~ 256 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG-------------------TY 256 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH-------------------HH
Confidence 245689999999999754 37889999999999999999999997543110 01
Q ss_pred hhhcccccCCCCC--HHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhcc
Q 009750 298 LHLMDSHLEGNFS--SEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLAP 344 (527)
Q Consensus 298 ~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~dp~~--Rpt~~~vl~~L~~ 344 (527)
..+........++ ...+..+.+++.+||..++.+ |+++.++++|-+.
T Consensus 257 ~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~ 307 (370)
T cd05621 257 SKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFF 307 (370)
T ss_pred HHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCccc
Confidence 1121111111122 234667889999999865543 8999999998654
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-43 Score=343.39 Aligned_cols=240 Identities=19% Similarity=0.242 Sum_probs=196.6
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||.||+|.+.. +++.||||+++... ....+.+..|+.++..+ +||||+++++++.+.+.+++||||+
T Consensus 2 ~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 78 (316)
T cd05620 2 VLGKGSFGKVLLAELKG---KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFL 78 (316)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCC
Confidence 47999999999999987 78899999997642 12345677888888765 8999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC----CCCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----DGKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~----~~~~ 228 (527)
++|+|..++. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++... ....
T Consensus 79 ~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05620 79 NGGDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155 (316)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceec
Confidence 9999999986 3467899999999999999999999999 9999999999999999999999999987432 1234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ...... . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~-----------~~~~~~--------~--~~~~ 214 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE-----------LFESIR--------V--DTPH 214 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-----------HHHHHH--------h--CCCC
Confidence 568999999999999999999999999999999999999986543110 001000 0 0112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTK-DLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~-~vl~~L~ 343 (527)
++...+..+.+|+.+||+.||.+||++. ++++|-.
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~ 250 (316)
T cd05620 215 YPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPF 250 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCC
Confidence 2333456788999999999999999984 6666643
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=337.48 Aligned_cols=251 Identities=18% Similarity=0.201 Sum_probs=205.3
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+++.||+|+||+||++.+.. +++.||||++...... ....+.+|+.+++.++||||+++++.+......++||
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 3 RHYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred eEEEEEecCCCeEEEEEEEcC---CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 356778999999999999876 7889999998754322 2345789999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++|+|..++.......+++..+..++.||+.||.|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 158 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI 158 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc
Confidence 9999999999886544557999999999999999999999999 9999999999999999999999999987654332
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
...+++.|+|||++.+..++.++|||||||++|||++|+.||.+.+.... .. .+...+. ...
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~-----------~~-----~~~~~~~-~~~ 221 (285)
T cd05605 159 RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-----------RE-----EVERRVK-EDQ 221 (285)
T ss_pred ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH-----------HH-----HHHHHhh-hcc
Confidence 34678999999999988899999999999999999999999865321100 00 0001111 111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
..++...+..+.+|+.+||+.||.+|| ++.++++|-+.
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~ 264 (285)
T cd05605 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFF 264 (285)
T ss_pred cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCc
Confidence 223444667789999999999999999 88899888554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-43 Score=344.86 Aligned_cols=244 Identities=18% Similarity=0.205 Sum_probs=199.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCC-ccceeEEEEEeCCeeeE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHK-RLANLIGYCCDGDERLL 147 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~-nIv~l~~~~~~~~~~~l 147 (527)
+.+++.||+|+||.||+|.... +++.||||++.+.. ....+.+..|+.++..+.|+ +|+++++++...+.+++
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l 78 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 78 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEE
Confidence 3467889999999999999987 78899999997642 22345788999999999764 68889999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC--
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~-- 225 (527)
||||+++|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 79 v~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 79 VMEYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred EEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 999999999999986 4457899999999999999999999999 99999999999999999999999999864321
Q ss_pred --CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 226 --GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.+... .. ..+..
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-----------~~--------~~i~~- 215 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-----------LF--------QSIME- 215 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-----------HH--------HHHHc-
Confidence 224568999999999999999999999999999999999999986543110 00 01111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHh
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNT-----KDLVSTL 342 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~-----~~vl~~L 342 (527)
....++...+..+.+|+.+||+.||.+|++. .++++|-
T Consensus 216 -~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp 258 (324)
T cd05587 216 -HNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHA 258 (324)
T ss_pred -CCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 1122334456678899999999999999986 6676663
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=328.72 Aligned_cols=242 Identities=24% Similarity=0.361 Sum_probs=197.2
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
.||.|+||.||+|.+.. +++.||+|.+...... ....+.+|++++++++||||+++++++......++||||++++
T Consensus 2 ~lg~g~~g~vy~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 2 RIGRGNFGEVFSGRLRA---DNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred ccCcccCccEEEEEEec---CCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 57999999999999987 7888999988654322 2457999999999999999999999999999999999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc------c
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS------Y 229 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~------~ 229 (527)
+|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++........ .
T Consensus 79 ~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 79 DFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred cHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 99999964 3456899999999999999999999999 99999999999999999999999999875443211 1
Q ss_pred ccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..+..|+|||.+.++.++.++|||||||++|||++ |..||..... ......+.......
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--------------------~~~~~~~~~~~~~~ 216 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--------------------QQTREAIEQGVRLP 216 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--------------------HHHHHHHHcCCCCC
Confidence 12356999999998889999999999999999998 7777643210 00111111111223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+...+..+.+|+.+||+.+|++|||+.++++.|.
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 34445667899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=342.41 Aligned_cols=238 Identities=21% Similarity=0.270 Sum_probs=195.6
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||.||+|.+.. +++.||||+++... ....+.+..|..++..+ +||||+++++++.+.+.+++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~ 78 (316)
T cd05619 2 MLGKGSFGKVFLAELKG---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYL 78 (316)
T ss_pred eeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCC
Confidence 57999999999999987 78899999997642 22345677788888865 9999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|..++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05619 79 NGGDLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT 155 (316)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceee
Confidence 9999999996 3457899999999999999999999999 99999999999999999999999999875322 234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ...... . ....
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-----------~~~~i~--------~--~~~~ 214 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE-----------LFQSIR--------M--DNPC 214 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH-----------HHHHHH--------h--CCCC
Confidence 568999999999998899999999999999999999999986542110 000000 0 0112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHH
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTK-DLVST 341 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~-~vl~~ 341 (527)
++...+..+.+|+.+||+.||.+||++. +++.|
T Consensus 215 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 215 YPRWLTREAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 2334556788999999999999999997 66655
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=334.66 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=204.0
Q ss_pred ccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||.||+|..... ..+++.||||.++..... ..+.+.+|++++++++|+||+++++++......++|
T Consensus 7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 86 (280)
T cd05049 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMV 86 (280)
T ss_pred hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEE
Confidence 44678899999999999988643 125678999999765543 346799999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcC------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeec
Q 009750 149 AEYMPNDTLAKHLFHWE------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSC 216 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~D 216 (527)
|||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|
T Consensus 87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~d 165 (280)
T cd05049 87 FEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIGD 165 (280)
T ss_pred EecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEECC
Confidence 99999999999996432 245789999999999999999999999 99999999999999999999999
Q ss_pred ccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHH
Q 009750 217 FGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 217 FG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
||++...... ....+++.|+|||++.+..++.++|||||||++|||++ |..||...+... ..
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-----------~~ 234 (280)
T cd05049 166 FGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-----------VI 234 (280)
T ss_pred cccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----------HH
Confidence 9998754322 22334678999999999999999999999999999999 999886532111 00
Q ss_pred HHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 290 DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.... .......+...+..+.+++.+||+.||.+||++.++++.|+
T Consensus 235 ~~~~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 ECIT---------QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHH---------cCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1111 11111223345567899999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=345.70 Aligned_cols=266 Identities=18% Similarity=0.248 Sum_probs=198.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeC-----Ce
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG-----DE 144 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 144 (527)
+.+.+.||+|+||.||+|++.. +++.||||++..... .....+.+|+.++++++||||+++++++... ..
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTH---TGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECC---CCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCce
Confidence 3467788999999999999987 788999999875322 2345689999999999999999999998643 24
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
+++||||+. ++|.+++. ....+++..+..++.||++||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 79 ~~lv~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 79 IYVVFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 799999995 58999886 4457999999999999999999999999 9999999999999999999999999987542
Q ss_pred CC-------CccccCCccCCcccccC--CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc----ccchhhHHHH
Q 009750 225 DG-------KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP----IKFNFGALDM 291 (527)
Q Consensus 225 ~~-------~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~----~~~~~~~~~~ 291 (527)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.+.+........ ..........
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 21 23468999999999876 57899999999999999999999999765421100000 0000000000
Q ss_pred HhcCcchhhc---ccccCCCCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 292 IRGKNILHLM---DSHLEGNFS---SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 292 ~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.........+ .......+. ...++.+.+|+.+||+.||++|||++++++|-+.
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f 293 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF 293 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchh
Confidence 0000000010 000000000 1134567899999999999999999999998543
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=331.01 Aligned_cols=248 Identities=23% Similarity=0.357 Sum_probs=207.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+++.||.|+||.||+|.+. .++.+|+|++..........+.+|+.+++.++||||+++++++......++||||
T Consensus 8 y~~~~~ig~g~~~~vy~~~~~----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 8 FTLERKLGSGYFGEVWEGLWK----NRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred HHHhhhhccCCCccEEEeEec----CCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 346788899999999999997 4567999999876655567899999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++++|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~ 162 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS 162 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCcccccc
Confidence 99999999998655567899999999999999999999999 9999999999999999999999999987654332
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
...++..|+|||.+.+..++.++|||||||++|+|++ |+.||...+... ... .+.....
T Consensus 163 ~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~-----------~~~---------~~~~~~~ 222 (261)
T cd05148 163 DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE-----------VYD---------QITAGYR 222 (261)
T ss_pred CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH-----------HHH---------HHHhCCc
Confidence 2234567999999988889999999999999999998 788886532110 001 1111122
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+...+..+.+++.+||+.||.+|||+.++++.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 223 MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 22344556778999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-44 Score=321.31 Aligned_cols=243 Identities=17% Similarity=0.222 Sum_probs=211.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
++++||+|+||.||++.++. +|+.||||.+.... +..++..||.||.+.+.|+||++||.+.....++||||||-
T Consensus 37 i~~KLGEGSYGSV~KAIH~E---sG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 37 IVGKLGEGSYGSVHKAIHRE---SGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHhcCCcchHHHHHHHhc---cCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 68899999999999999998 99999999987653 67899999999999999999999999999999999999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Ccc
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSY 229 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~~ 229 (527)
-|+..++++. ++.+|++.++..+++..++||+|||... -||||||..||||+.+|++||+|||.+..+.+. .+.
T Consensus 112 AGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTV 189 (502)
T KOG0574|consen 112 AGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTV 189 (502)
T ss_pred CCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcc
Confidence 9999999975 6678999999999999999999999987 899999999999999999999999999876654 467
Q ss_pred ccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC--
Q 009750 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG-- 307 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 307 (527)
.|||.|||||++..-.|+.++||||||++..||..|++|+..-. .....-++.....+
T Consensus 190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH--------------------PMRAIFMIPT~PPPTF 249 (502)
T KOG0574|consen 190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH--------------------PMRAIFMIPTKPPPTF 249 (502)
T ss_pred ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc--------------------ccceeEeccCCCCCCC
Confidence 89999999999998899999999999999999999999974311 11111111111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.-|...+.++-+++++||.++|++|-|+..+++|-.
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~F 285 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTF 285 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhh
Confidence 235677889999999999999999999999998853
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=333.84 Aligned_cols=244 Identities=19% Similarity=0.218 Sum_probs=195.9
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
||+|+||.||++..+. +|+.||+|++..... .....+..|++++++++||||+++++++..+...++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g 77 (277)
T cd05607 1 LGKGGFGEVCAVQVKN---TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNG 77 (277)
T ss_pred CCCCCceEEEEEEEcc---CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCC
Confidence 6999999999999987 789999999875322 1234567799999999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---cccc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---SYST 231 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---~~~~ 231 (527)
++|..++.......+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....... ...+
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05607 78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAG 156 (277)
T ss_pred CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCC
Confidence 99999887545556899999999999999999999999 9999999999999999999999999987654432 3467
Q ss_pred CCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCH
Q 009750 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS 311 (527)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (527)
+..|+|||++.+..++.++|||||||++|||++|+.||........ ..... .......... ...
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~----------~~~~~-----~~~~~~~~~~-~~~ 220 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA----------KEELK-----RRTLEDEVKF-EHQ 220 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh----------HHHHH-----HHhhcccccc-ccc
Confidence 8999999999988899999999999999999999999864321100 00000 0011111100 112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 312 EEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 312 ~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..+..+.+|+.+||+.||.+||++.++++.
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 345668999999999999999999665543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=328.09 Aligned_cols=243 Identities=20% Similarity=0.255 Sum_probs=197.1
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
+||+|+||.||+|.+.... +++.||||+++..... ..+.+.+|+.+++.++||||+++++++. ....++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKK-SEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCC-CceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 5799999999999764322 6788999998755432 2457999999999999999999999985 4567999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc------
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS------ 228 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~------ 228 (527)
|+|.+++. ....+++..+..++.|++.||.|||+++ ++||||||.|||++.++.+||+|||++........
T Consensus 80 ~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 80 GPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 99999996 3456899999999999999999999999 99999999999999999999999999876543221
Q ss_pred -cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 229 -YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 229 -~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
..++..|+|||.+.+..++.++|||||||++|||++ |+.||...+... ....+.....
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------------------~~~~i~~~~~ 216 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE--------------------VTQMIESGER 216 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--------------------HHHHHHCCCC
Confidence 123478999999988889999999999999999998 888886432110 1111112222
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+...+..+.+||.+||+.||++||++.+|.+.|+.
T Consensus 217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 23344556778999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=335.30 Aligned_cols=255 Identities=24% Similarity=0.332 Sum_probs=205.9
Q ss_pred ccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+.+.||+|+||.||+|..... ..++..+++|.+........+.+.+|+.++++++||||+++++++......++||
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 86 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVF 86 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEE
Confidence 34667889999999999986431 1256679999987655444567999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceee
Q 009750 150 EYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~ 215 (527)
||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+
T Consensus 87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~ 165 (291)
T cd05094 87 EYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKIG 165 (291)
T ss_pred ecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEEC
Confidence 9999999999996432 234899999999999999999999999 9999999999999999999999
Q ss_pred cccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhH
Q 009750 216 CFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGA 288 (527)
Q Consensus 216 DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 288 (527)
|||++...... ....++..|+|||++.+..++.++|||||||++|||+| |+.||...+... .
T Consensus 166 dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----------~ 234 (291)
T cd05094 166 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-----------V 234 (291)
T ss_pred CCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------H
Confidence 99998754332 22345678999999998889999999999999999999 888875432110 0
Q ss_pred HHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 289 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
....... .....+...+..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 235 ~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 235 IECITQG---------RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHhCC---------CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 1111111 1111223345678899999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=340.96 Aligned_cols=239 Identities=22% Similarity=0.256 Sum_probs=193.5
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHH-HhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAW-GVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||+||+|.+.. +++.||||++..... .....+.+|.. +++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 78 (323)
T cd05575 2 VIGKGSFGKVLLAKHKA---DGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYV 78 (323)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCC
Confidence 47999999999999987 789999999975422 12334555555 567889999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (323)
T cd05575 79 NGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST 155 (323)
T ss_pred CCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccc
Confidence 9999999987 4567899999999999999999999999 99999999999999999999999999875322 223
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+... .. ..+.... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-----------~~--------~~i~~~~--~~ 214 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE-----------MY--------DNILNKP--LR 214 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH-----------HH--------HHHHcCC--CC
Confidence 468999999999999899999999999999999999999986542110 00 0111111 11
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCH----HHHHHHh
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNT----KDLVSTL 342 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~----~~vl~~L 342 (527)
.+...+..+.+++.+||+.||.+||++ .+++.|-
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~ 252 (323)
T cd05575 215 LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHV 252 (323)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCC
Confidence 222345678899999999999999988 4666654
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=343.02 Aligned_cols=242 Identities=18% Similarity=0.214 Sum_probs=198.9
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 148 (527)
.++..||+|+||.||+|.+.. +++.||||++++... ...+.+..|..++..+ +|++|+++++++...+.+++|
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 3 NFLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred eEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence 467788999999999999987 788999999976432 2234577888888888 689999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC---
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--- 225 (527)
|||+++|+|..++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 80 MEYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV 156 (323)
T ss_pred EcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCC
Confidence 99999999999986 4457899999999999999999999999 99999999999999999999999999875332
Q ss_pred -CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 226 -GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 226 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||...+... . ...+...
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~-----------~--------~~~i~~~- 216 (323)
T cd05616 157 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-----------L--------FQSIMEH- 216 (323)
T ss_pred ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH-----------H--------HHHHHhC-
Confidence 234568999999999999999999999999999999999999986542110 0 0111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNT-----KDLVST 341 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~-----~~vl~~ 341 (527)
...++...+..+.+|+.+||+.||.+|++. .++++|
T Consensus 217 -~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 217 -NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred -CCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 112344456778999999999999999985 666655
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=342.06 Aligned_cols=240 Identities=20% Similarity=0.247 Sum_probs=199.1
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||.|+||+||+|.+.. +++.||||++++.. ....+.+.+|+.++..+ +||||+++++++...+.+++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 78 (318)
T cd05570 2 VLGKGSFGKVLLAELKG---TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYV 78 (318)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence 47999999999999987 78889999998643 22345678899999888 7999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|..++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (318)
T cd05570 79 NGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST 155 (318)
T ss_pred CCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccc
Confidence 9999999886 4457999999999999999999999999 99999999999999999999999999865321 223
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..+|+.|+|||++.+..++.++|||||||++|+|++|+.||...+... ... .+... ...
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~-----------~~~--------~i~~~--~~~ 214 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE-----------LFQ--------SILED--EVR 214 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH-----------HHH--------HHHcC--CCC
Confidence 468999999999999999999999999999999999999986543110 001 01111 112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNT-----KDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~-----~~vl~~L~ 343 (527)
++...+..+.+||.+||+.||.+||++ .+++.+-+
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~ 254 (318)
T cd05570 215 YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPF 254 (318)
T ss_pred CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCC
Confidence 333456678999999999999999999 88888743
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=342.34 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=201.1
Q ss_pred ccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeC-Ceee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDG-DERL 146 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~-~~~~ 146 (527)
+.+++.||.|+||.||+|...+. ..+++.||+|+++..... ..+.+.+|+.++.++ +|+||++++++|... ..++
T Consensus 9 ~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~ 88 (337)
T cd05054 9 LKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLM 88 (337)
T ss_pred hhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEE
Confidence 44778899999999999976431 225678999998754322 234688899999999 899999999988654 5688
Q ss_pred EEEEecCCCCHhHHhhhcC-----------------------------------------------------------CC
Q 009750 147 LVAEYMPNDTLAKHLFHWE-----------------------------------------------------------NQ 167 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~-----------------------------------------------------------~~ 167 (527)
++|||+++++|.+++.... ..
T Consensus 89 ~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (337)
T cd05054 89 VIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKE 168 (337)
T ss_pred EEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhc
Confidence 9999999999999986321 12
Q ss_pred CcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC------CccccCCccCCcccc
Q 009750 168 TIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYL 241 (527)
Q Consensus 168 ~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~ 241 (527)
.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... ....++..|+|||++
T Consensus 169 ~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 247 (337)
T cd05054 169 PLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI 247 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHh
Confidence 6899999999999999999999999 999999999999999999999999999765322 123446789999999
Q ss_pred cCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHH
Q 009750 242 RNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 320 (527)
Q Consensus 242 ~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 320 (527)
.+..++.++|||||||+||||++ |..||.+..... .....+........+...+..+.++
T Consensus 248 ~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~l 308 (337)
T cd05054 248 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-------------------EFCRRLKEGTRMRAPEYATPEIYSI 308 (337)
T ss_pred cCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-------------------HHHHHHhccCCCCCCccCCHHHHHH
Confidence 99999999999999999999998 998886431110 0001111111112233345678999
Q ss_pred HHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 321 ASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 321 i~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
+.+||+.+|++||++.+++++|+.+.
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-42 Score=333.60 Aligned_cols=254 Identities=25% Similarity=0.369 Sum_probs=202.3
Q ss_pred CcccccccCCCCCCCeEEEEEecC-CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
+...+++.||+|+||.||+|.+.. +...++.||+|.+...... ....+.+|+.+++.++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 345577889999999999998632 1125678999999754322 23578999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcC---------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCc
Q 009750 148 VAEYMPNDTLAKHLFHWE---------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~---------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~ 212 (527)
||||+++++|.+++.... ...+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~~ 163 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLHV 163 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCcE
Confidence 999999999999985321 234788999999999999999999999 9999999999999999999
Q ss_pred eeecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccch
Q 009750 213 RLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 213 kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 285 (527)
||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++ |..||.+....
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~---------- 233 (283)
T cd05090 164 KISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ---------- 233 (283)
T ss_pred EeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH----------
Confidence 99999999764322 22334667999999988889999999999999999999 88887653210
Q ss_pred hhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.+...+........+...+..+.+++.+||+.||++||++.+++++|..
T Consensus 234 ----------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 234 ----------EVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ----------HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 0111111111112233445678999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-42 Score=328.73 Aligned_cols=250 Identities=23% Similarity=0.311 Sum_probs=202.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
+...||+|+||.||+|.+.....+...||||.++...... ...|.+|+.++++++||||+++++++...+..++||||+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 87 (266)
T cd05033 8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYM 87 (266)
T ss_pred eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcC
Confidence 5677899999999999987543345689999987654322 457899999999999999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-----
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK----- 227 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~----- 227 (527)
++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++.......
T Consensus 88 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 165 (266)
T cd05033 88 ENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTT 165 (266)
T ss_pred CCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhcccccccceec
Confidence 99999999964 3347899999999999999999999999 9999999999999999999999999998764211
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ...... ....
T Consensus 166 ~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-----------~~~~~~---------~~~~ 225 (266)
T cd05033 166 KGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-----------DVIKAV---------EDGY 225 (266)
T ss_pred cCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-----------HHHHHH---------HcCC
Confidence 1223567999999998889999999999999999998 88887432100 000111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
....+...+..+.+|+.+||+.+|++||++.+++++|+.+
T Consensus 226 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1122334566789999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-42 Score=329.37 Aligned_cols=251 Identities=18% Similarity=0.236 Sum_probs=202.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.++.+++.||+|+||.||+|.+.. +++.||||++..........+.+|+.++++++||||+++++++...+..++||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~---~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLH---TGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECC---CCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 345678899999999999999977 78899999997655445567889999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 86 e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06646 86 EYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK 162 (267)
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccc
Confidence 9999999999986 3457899999999999999999999999 999999999999999999999999998764322
Q ss_pred -CccccCCccCCccccc---CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 -KSYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....+++.|+|||.+. ...++.++|||||||++|||++|+.||...+.... ....... ....
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-----------~~~~~~~---~~~~ 228 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-----------LFLMSKS---NFQP 228 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-----------heeeecC---CCCC
Confidence 2346788999999984 34578899999999999999999998753221100 0000000 0000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
... ......+..+.+|+.+||..||++|||+++++++|
T Consensus 229 ~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 229 PKL--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCC--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 000 01123456789999999999999999999999886
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-42 Score=327.40 Aligned_cols=247 Identities=23% Similarity=0.339 Sum_probs=202.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
..+++.||+|++|.||+|.+. +++.||||.++... ...+++.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~----~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 8 IQLLRKLGAGQFGEVWEGLWN----NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred eeeEEEecccCCccEEEEEec----CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 446788899999999999976 45679999987654 2456799999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--cc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--SY 229 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--~~ 229 (527)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ..
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR 161 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence 99999999997544457899999999999999999999999 9999999999999999999999999987654322 11
Q ss_pred cc---CCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 230 ST---NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 230 ~~---t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
.+ +..|+|||++.+..++.++|||||||++|||+| |+.||.+..... ... .+....
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----------~~~---------~~~~~~ 221 (261)
T cd05068 162 EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-----------VLQ---------QVDQGY 221 (261)
T ss_pred CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----------HHH---------HHHcCC
Confidence 22 357999999998889999999999999999999 888886532110 001 111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...+..+.+++.+||+.+|.+||++.++++.|+.
T Consensus 222 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 222 RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 112233456778999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=342.25 Aligned_cols=246 Identities=19% Similarity=0.206 Sum_probs=197.9
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||.||+|.+.. +++.||||++++.... ..+.+.+|+.++.++ +||||+++++++.....+++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (327)
T cd05617 2 VIGRGSYAKVLLVRLKK---NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYV 78 (327)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence 47999999999999987 7889999999865322 234688999999998 6999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|..++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (327)
T cd05617 79 NGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST 155 (327)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceec
Confidence 9999999886 3457999999999999999999999999 99999999999999999999999999875321 234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|+.||........... ...... .+... ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~----~~~~~~--------~~~~~--~~~ 221 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNT----EDYLFQ--------VILEK--PIR 221 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccccc----HHHHHH--------HHHhC--CCC
Confidence 5689999999999999999999999999999999999999964321110000 000000 01111 112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHHh
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNT------KDLVSTL 342 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~------~~vl~~L 342 (527)
++...+..+.+++.+||+.||.+|+++ .++++|-
T Consensus 222 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 222 IPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 344455678899999999999999984 5777664
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=333.71 Aligned_cols=253 Identities=22% Similarity=0.306 Sum_probs=202.5
Q ss_pred cccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
...++++||.|+||.||+|.+..+ ...++.||||+++...... .+.+.+|+.++..++||||+++++++......++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 445788899999999999987642 1246789999998554322 3568999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhc--------------CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCce
Q 009750 148 VAEYMPNDTLAKHLFHW--------------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPR 213 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~k 213 (527)
++||+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+|||+++++.+|
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~k 164 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLNVK 164 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCceE
Confidence 99999999999998521 1235888999999999999999999999 99999999999999999999
Q ss_pred eecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchh
Q 009750 214 LSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNF 286 (527)
Q Consensus 214 l~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 286 (527)
|+|||+++...... ...+++.|+|||++.++.++.++|||||||++|||++ |..||.+.....
T Consensus 165 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---------- 234 (283)
T cd05091 165 ISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---------- 234 (283)
T ss_pred ecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH----------
Confidence 99999987643321 2234678999999988889999999999999999998 777775432110
Q ss_pred hHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
. ...+........+..++..+.+|+.+||+.+|.+||++.+++..|+.
T Consensus 235 -~---------~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 -V---------IEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -H---------HHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 0 11111111122334456678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=352.50 Aligned_cols=258 Identities=22% Similarity=0.256 Sum_probs=195.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeC--------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG-------- 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-------- 142 (527)
.+.+++.||+|+||.||+|.... +++.||||++.... ....+|+.+|+.++|||||++++++...
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~---~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICID---TSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECC---CCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 35577789999999999999987 78899999886432 3456899999999999999999987432
Q ss_pred CeeeEEEEecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-CceeecccC
Q 009750 143 DERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGL 219 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~ 219 (527)
..+++||||+++ +|.+++.. .....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeecccc
Confidence 246799999975 78777653 23467899999999999999999999999 99999999999999665 799999999
Q ss_pred ccccCCC---CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc-
Q 009750 220 MKNSRDG---KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG- 294 (527)
Q Consensus 220 a~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 294 (527)
++..... ....+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+........ ........
T Consensus 218 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~-------~i~~~~~~p 290 (440)
T PTZ00036 218 AKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLV-------RIIQVLGTP 290 (440)
T ss_pred chhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-------HHHHHhCCC
Confidence 9865432 345679999999998764 68999999999999999999999997653221000 00000000
Q ss_pred ---------Ccchh-----hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 295 ---------KNILH-----LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 295 ---------~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..... +....+...++...+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f 354 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF 354 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhH
Confidence 00000 000011111233345678999999999999999999999998653
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-42 Score=333.31 Aligned_cols=250 Identities=16% Similarity=0.245 Sum_probs=206.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
...+.++..||.|+||.||+|.+.. +++.||||.+........+.+.+|+.+++.++|+||+++++.+......++|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECC---CCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 3456677889999999999999876 7888999999876655667899999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 96 ~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 96 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred ecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 99999999999985 345899999999999999999999999 999999999999999999999999998764332
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.... ... . .....
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~----------~~~-~-------~~~~~ 233 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----------LYL-I-------ATNGT 233 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh----------HHH-H-------hcCCC
Confidence 234678899999999888899999999999999999999999865421110 000 0 00000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.....+...+..+.+++.+||..||++|||+.+++.+-.
T Consensus 234 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~ 272 (296)
T cd06654 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272 (296)
T ss_pred CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChh
Confidence 011123345567889999999999999999999998744
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=344.55 Aligned_cols=248 Identities=19% Similarity=0.147 Sum_probs=201.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||++.... +++.||||+++.... ...+.+.+|+.+++.++||||+++++++.+....+||
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 3 FDVKSLVGRGHFGEVQVVREKA---TGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred ceEEEEEEeccCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence 3467788999999999999987 788999999986532 2345688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 80 MEYQPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred ECCCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 999999999999974 2357999999999999999999999999 9999999999999999999999999997654332
Q ss_pred ----ccccCCccCCccccc------CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 228 ----SYSTNLAYTPPEYLR------NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 228 ----~~~~t~~y~aPE~~~------~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
...+|+.|+|||++. +..++.++|||||||++|||++|+.||....... . .
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-----------~--------~ 218 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-----------T--------Y 218 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-----------H--------H
Confidence 236789999999986 4567899999999999999999999986542110 0 0
Q ss_pred hhhcccc--cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 298 LHLMDSH--LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 298 ~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..+.... ...+.....+..+.+|+.+||. +|.+|||+.+++.|-..
T Consensus 219 ~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~ 266 (330)
T cd05601 219 NNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFF 266 (330)
T ss_pred HHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCc
Confidence 1111100 1111112345678899999998 99999999999988543
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=346.43 Aligned_cols=249 Identities=18% Similarity=0.246 Sum_probs=210.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.|||+||.|+||.||++..+. ++-..|.|++........++++-||+||...+||+||+|++.|...+.++|+.|
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nke---t~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKE---TKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhccc---chhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 45699999999999999999997 777788999987777778899999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----C
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----G 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~ 226 (527)
||.||-...++.. -...|.+.++..+++|++.||.|||+++ |||||||..|||++-+|.++|+|||.+..... -
T Consensus 110 FC~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR 187 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR 187 (1187)
T ss_pred ecCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence 9999999888865 5678999999999999999999999999 99999999999999999999999998754332 3
Q ss_pred CccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 227 KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
.+++|||+|||||++. ..+|+.++||||||++|.||.-+.+|.-..+ .+ ..+.++.
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln--------------pM-----RVllKia 248 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN--------------PM-----RVLLKIA 248 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc--------------hH-----HHHHHHh
Confidence 4789999999999874 4679999999999999999999998752210 00 0011111
Q ss_pred cccc-CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 302 DSHL-EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 302 ~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.... ..--|...+..+.+++.+||.+||..||++.++++|-+
T Consensus 249 KSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpf 291 (1187)
T KOG0579|consen 249 KSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPF 291 (1187)
T ss_pred hcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcc
Confidence 1111 11235677888999999999999999999999999864
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=343.26 Aligned_cols=242 Identities=21% Similarity=0.303 Sum_probs=205.6
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~ 156 (527)
.||+|+||+||.|++.+ +...+|||-+........+-+..||.+.++|+|.|||+++|.+.+++++-|.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~---tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMD---TQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeecccc---ceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 57999999999999998 788899999987765556679999999999999999999999999999999999999999
Q ss_pred HhHHhhhcCCCCc--CHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC-CCCCceeecccCccccC----CCCcc
Q 009750 157 LAKHLFHWENQTI--EWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNSR----DGKSY 229 (527)
Q Consensus 157 L~~~l~~~~~~~l--~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~-~~~~~kl~DFG~a~~~~----~~~~~ 229 (527)
|.++|+. .=+++ ++.+.-.+.+||++||.|||.+. |||||||..|||++ -.|.+||+|||-++..- -..++
T Consensus 659 LSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF 736 (1226)
T KOG4279|consen 659 LSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF 736 (1226)
T ss_pred HHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence 9999975 33555 78888999999999999999998 99999999999995 57899999999887543 34578
Q ss_pred ccCCccCCcccccCCc--CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 230 STNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~--~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
.||..|||||++..++ |+.++|||||||++.||.||++||-..... ...++.-+ ++ ..-+
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp------------qAAMFkVG----my--KvHP 798 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP------------QAAMFKVG----MY--KVHP 798 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh------------hHhhhhhc----ce--ecCC
Confidence 8999999999998765 899999999999999999999998532111 00111111 11 1235
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
+.|.+.+.++..+|.+|+.+||.+||++.++|..
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 6788999999999999999999999999999876
|
|
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-42 Score=331.43 Aligned_cols=252 Identities=24% Similarity=0.317 Sum_probs=201.8
Q ss_pred cccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
...+.++||+|+||.||++.... ...++..+|+|.+........+.+.+|+++++.++|+||+++++++......++|
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV 85 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence 34467889999999999997532 1225678999998765544456899999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCC-------------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceee
Q 009750 149 AEYMPNDTLAKHLFHWEN-------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~-------------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~ 215 (527)
|||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.+||+
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~kL~ 164 (280)
T cd05092 86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIG 164 (280)
T ss_pred EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEEEC
Confidence 999999999999974321 35889999999999999999999999 9999999999999999999999
Q ss_pred cccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhH
Q 009750 216 CFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGA 288 (527)
Q Consensus 216 DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 288 (527)
|||++....... ...+++.|+|||++.+..++.++|||||||++|||++ |.+||....... .
T Consensus 165 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----------~ 233 (280)
T cd05092 165 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-----------A 233 (280)
T ss_pred CCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-----------H
Confidence 999987543221 2234678999999998899999999999999999998 888875321100 0
Q ss_pred HHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 289 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
............+...+..+.+|+.+||+.||.+||++.++++.|+
T Consensus 234 ---------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 234 ---------IECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---------HHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 0001111111223344567889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-42 Score=326.60 Aligned_cols=246 Identities=23% Similarity=0.348 Sum_probs=199.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
++.+++.||+|+||.||+|.... +..||||.+.... ...+.+.+|+.++++++||||+++++++......++|||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~----~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRG----QYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HeEEeeEecCcccceEEEEEecC----CCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 34578889999999999998763 3459999987543 345679999999999999999999999998889999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++|+|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||.++......
T Consensus 80 ~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 80 YMSNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred cCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 99999999999742 347899999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...++..|++||++.+..++.++|||||||++|+|++ |..||....... ..... . ..
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-----------~~~~~--------~-~~ 217 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-----------TVEKV--------S-QG 217 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-----------HHHHH--------h-cC
Confidence 1224567999999988889999999999999999999 888875332100 00111 0 01
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.....+...+..+.+++.+||+.||.+||++.+++..|+
T Consensus 218 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 218 LRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 111122234567899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-43 Score=340.84 Aligned_cols=250 Identities=20% Similarity=0.338 Sum_probs=219.3
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
..+||-|-||.||.|.+++ ..-.||||.++.+.+ ..++|+.|+.+|+.+.|||+|+|+|+|..+..+|||+|||.+
T Consensus 272 khKLGGGQYGeVYeGvWKk---yslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred eeccCCCcccceeeeeeec---cceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 4578999999999999998 566799999987653 457899999999999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--cccc-
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--SYST- 231 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~- 231 (527)
|+|.++|++.....++.-..+.++.||.+|++||..++ +|||||..+|+|+.++..+||+|||++++..... ...|
T Consensus 348 GNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGA 426 (1157)
T KOG4278|consen 348 GNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGA 426 (1157)
T ss_pred ccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCc
Confidence 99999999877778888889999999999999999998 9999999999999999999999999999865543 2233
Q ss_pred --CCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 232 --NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 232 --t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
.+-|.|||.+....++.|+|||+|||+|||+.| |..|+++-+ ..++..++....+-.
T Consensus 427 KFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid--------------------lSqVY~LLEkgyRM~ 486 (1157)
T KOG4278|consen 427 KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID--------------------LSQVYGLLEKGYRMD 486 (1157)
T ss_pred cCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc--------------------HHHHHHHHhcccccc
Confidence 467999999999999999999999999999998 778888743 233445556666666
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
-|..|++.+.+|++.||+.+|.+||++.|+.+.++.+-...
T Consensus 487 ~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 487 GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 78888999999999999999999999999999998775433
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=333.28 Aligned_cols=255 Identities=25% Similarity=0.324 Sum_probs=204.2
Q ss_pred ccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+.+.||+|+||.||++..... ..++..+|+|.+........+.+.+|++++++++||||+++++++...+.+++||
T Consensus 7 ~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 86 (288)
T cd05093 7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVF 86 (288)
T ss_pred eeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 34667889999999999986432 1245679999987655444567999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcC-----------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 150 EYMPNDTLAKHLFHWE-----------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~-----------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||
T Consensus 87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg 165 (288)
T cd05093 87 EYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFG 165 (288)
T ss_pred EcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccCC
Confidence 9999999999996421 235899999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHH
Q 009750 219 LMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 219 ~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
++....... ...++..|+|||++.+..++.++|||||||++|||+| |..||....... ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-----------~~~~ 234 (288)
T cd05093 166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-----------VIEC 234 (288)
T ss_pred ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------HHHH
Confidence 987543321 2234678999999998889999999999999999999 888875432110 0011
Q ss_pred HhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 292 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..... ....+...+..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 235 i~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 235 ITQGR---------VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHcCC---------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 11111 011122344568999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=330.27 Aligned_cols=242 Identities=21% Similarity=0.270 Sum_probs=209.7
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
+.||+|.|+.|-++++.- +|..||||++.+....+ ...+.+|+..|+.++|||||+||++......+|||+|+-+
T Consensus 24 kTlG~GHFAVVKLArHVF---TGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD 100 (864)
T KOG4717|consen 24 KTLGRGHFAVVKLARHVF---TGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGD 100 (864)
T ss_pred hhhcCCceehhhhhhhhc---ccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecC
Confidence 457999999999998877 89999999998765444 3478999999999999999999999999999999999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe-CCCCCceeecccCccccCCC---Ccc
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF-DENGDPRLSCFGLMKNSRDG---KSY 229 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll-~~~~~~kl~DFG~a~~~~~~---~~~ 229 (527)
+|+|++++-. ....+++..+.++++||+.|+.|+|... ||||||||+||.+ .+-|-+||.|||++-.+..+ .+.
T Consensus 101 ~GDl~DyImK-He~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~Ts 178 (864)
T KOG4717|consen 101 GGDLFDYIMK-HEEGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTS 178 (864)
T ss_pred CchHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcc
Confidence 9999999975 3457999999999999999999999998 9999999999877 56689999999999876665 467
Q ss_pred ccCCccCCcccccCCcCC-CCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 230 STNLAYTPPEYLRNGRVT-PESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~-~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
+|+..|-|||+++|..|+ +++||||||||||.|++|++||...++. +.+..|++- .-.
T Consensus 179 CGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS-------------------ETLTmImDC--KYt 237 (864)
T KOG4717|consen 179 CGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS-------------------ETLTMIMDC--KYT 237 (864)
T ss_pred cchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch-------------------hhhhhhhcc--ccc
Confidence 899999999999999886 5889999999999999999999754322 223334432 223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.|...+.++.+||..||..||++|.+.++|..+-|
T Consensus 238 vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 238 VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred CchhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence 57888999999999999999999999999988755
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=348.33 Aligned_cols=246 Identities=17% Similarity=0.133 Sum_probs=198.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||.||++.... +++.||||+++... ......+.+|+.++..++||||+++++.+.+.+.++||
T Consensus 3 f~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 3 FESLKVIGRGAFGEVRLVQKKD---TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred ceEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 3467888999999999999987 78899999997532 22345788999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||++......
T Consensus 80 ~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 80 MEFLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred EeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 99999999999997 4567899999999999999999999999 999999999999999999999999998643211
Q ss_pred -------------------------------------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCC
Q 009750 227 -------------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP 269 (527)
Q Consensus 227 -------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~ 269 (527)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 1346899999999999999999999999999999999999999
Q ss_pred CCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCH--HHHHHHHHHHHHhcccCCCCCCC---HHHHHHHhc
Q 009750 270 PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS--EEATVVFDLASRCLQYEPRERPN---TKDLVSTLA 343 (527)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~cl~~dp~~Rpt---~~~vl~~L~ 343 (527)
...+... ... .+........++. ..+..+.+||.+|+. ||.+|++ +.++++|-+
T Consensus 237 ~~~~~~~-----------~~~--------~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~ 295 (360)
T cd05627 237 CSETPQE-----------TYR--------KVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPF 295 (360)
T ss_pred CCCCHHH-----------HHH--------HHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCC
Confidence 6543111 000 1111000001111 235668899999874 9999984 678887754
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=329.37 Aligned_cols=253 Identities=18% Similarity=0.250 Sum_probs=198.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCC-CceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+++.||.|+||+||+|.+...+. ....|++|.+...... ...++..|+.++++++||||+++++++. ....++++
T Consensus 9 ~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~ 87 (279)
T cd05111 9 LRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVT 87 (279)
T ss_pred ceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEE
Confidence 3467889999999999999865210 1125788887643321 2356888899999999999999999885 45678999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 88 e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T cd05111 88 QLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKK 165 (279)
T ss_pred EeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCcc
Confidence 99999999999964 3457899999999999999999999999 9999999999999999999999999997653321
Q ss_pred ----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 228 ----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
...++..|+|||++.++.++.++|||||||++|||++ |..||.+..... ..+++.
T Consensus 166 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--------------------~~~~~~ 225 (279)
T cd05111 166 YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--------------------VPDLLE 225 (279)
T ss_pred cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------------------HHHHHH
Confidence 2345678999999998899999999999999999998 998886532110 011111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.......+..++..+.+++.+||..||.+|||+.++++.|..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 226 KGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 111111122234567899999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=356.26 Aligned_cols=248 Identities=18% Similarity=0.211 Sum_probs=202.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCC-----
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGD----- 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----- 143 (527)
.+.+.+.||+|+||+||+|.+.. +++.||||++...... ....+.+|+.++..++|+||+++++.+....
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVS---DGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcC---CCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 45577789999999999999887 7899999999765432 2356889999999999999999988775432
Q ss_pred ---eeeEEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 144 ---ERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 144 ---~~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
.+++||||+++|+|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecc
Confidence 368999999999999998642 2356899999999999999999999999 9999999999999999999999999
Q ss_pred CccccCC------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHH
Q 009750 219 LMKNSRD------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 219 ~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
+++.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ...
T Consensus 189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~-----------~~~-- 255 (496)
T PTZ00283 189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE-----------VMH-- 255 (496)
T ss_pred cCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-----------HHH--
Confidence 9876432 234578999999999999899999999999999999999999986542110 000
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.+.. ......+...++.+.+|+.+||+.||.+||++.+++.+.
T Consensus 256 ------~~~~-~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p 298 (496)
T PTZ00283 256 ------KTLA-GRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298 (496)
T ss_pred ------HHhc-CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCH
Confidence 0111 111123445567799999999999999999999999873
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=324.86 Aligned_cols=245 Identities=19% Similarity=0.265 Sum_probs=197.8
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
.||+|+||.||+|.+.... .+..||||++...... ..+.+.+|+.++++++||||+++++++. ....++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~-~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRK-KQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCC-CceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 3799999999999875322 5567999998765432 2457999999999999999999999985 45789999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc-------
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS------- 228 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~------- 228 (527)
+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++........
T Consensus 80 ~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 80 PLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 99999864 3457899999999999999999999999 99999999999999999999999999875433211
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
..++..|+|||++.+..++.++|||||||++|||++ |..||...... .....+......
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------------------~~~~~~~~~~~~ 217 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------------------EVMSFIEQGKRL 217 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------------------HHHHHHHCCCCC
Confidence 122467999999988889999999999999999996 98888543211 111111222223
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
..+...++.+.+++.+||..||++||++.+|.+.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 34455667899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=334.07 Aligned_cols=254 Identities=23% Similarity=0.286 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCc--eEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNR--RWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~--~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 145 (527)
.+..+.+.||+|+||.||+|.+.. ++ ..+|+|.++.... .....+.+|++++.++ +||||+++++++...+.+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~---~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEcc---CCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 344577888999999999999876 44 3568888764322 2245788999999999 899999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~ 211 (527)
++||||+++++|.+++.... ...+++..++.++.||+.||+|||+.+ ++||||||+|||++.++.
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYV 162 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCc
Confidence 99999999999999996432 235789999999999999999999999 999999999999999999
Q ss_pred ceeecccCccccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhh
Q 009750 212 PRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFG 287 (527)
Q Consensus 212 ~kl~DFG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 287 (527)
+||+|||++...... .....+..|+|||++.+..++.++|||||||++|||+| |..||...+...
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----------- 231 (303)
T cd05088 163 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----------- 231 (303)
T ss_pred EEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-----------
Confidence 999999998643221 11223567999999988889999999999999999998 998885432110
Q ss_pred HHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 288 ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.... +........+...+..+.+|+.+||+.+|.+||++.+++..|+.+..
T Consensus 232 ~~~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 232 LYEK---------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HHHH---------HhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0000 11111111223345678899999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=323.84 Aligned_cols=244 Identities=21% Similarity=0.266 Sum_probs=204.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+.||+|++|.||+|.... +++.|++|.+..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 4 ILNKIGKGSFGVVFKVVRKA---DKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred EeEEecCCCCeEEEEEEEcC---CCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 56678999999999999987 788999999875432 2346789999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++++|.+++.......+++..+..++.+|+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 99999999997654567999999999999999999999999 9999999999999999999999999987654432
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...+++.|+|||++.+..++.++|||||||++|+|++|+.||...+... .. ..+.. ....
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~--------~~~~~-~~~~ 219 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-----------LI--------LKIIR-GVFP 219 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-----------HH--------HHHHc-CCCC
Confidence 3357889999999998889999999999999999999999986542110 00 01111 1112
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..+...+..+.+++.+||+.+|++||++.+++++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 2333456778999999999999999999999976
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=325.75 Aligned_cols=254 Identities=16% Similarity=0.197 Sum_probs=206.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+.+.||.|+||.||+|+... +++.||||.++.....+ ...+.+|+++++.++||||+++++++...+..++
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLL---DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNI 79 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeC---CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEE
Confidence 34467788999999999999987 78899999886533222 3468999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 148 VAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
||||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999999988532 2345889999999999999999999999 99999999999999999999999999876543
Q ss_pred CC----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 226 GK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 226 ~~----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
.. ...+++.|+|||.+.+..++.++|+||||+++|||++|+.||........ . ....+
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~------------~------~~~~~ 220 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF------------S------LCQKI 220 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH------------H------HHHHH
Confidence 22 34678899999999888899999999999999999999999854321100 0 00111
Q ss_pred cc-ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 302 DS-HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 302 ~~-~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.. ......+...+..+.+++.+||..+|.+||++.++++.|+.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 221 EQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred hcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 11 1111122345577899999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-42 Score=345.03 Aligned_cols=250 Identities=20% Similarity=0.174 Sum_probs=200.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
...+.+++.||+|+||.||++.+.. +++.||+|++.+... ...+.+.+|+.+++.++||||+++++++......
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKS---TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECC---CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 3456678889999999999999987 788999999865321 2234588999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred EEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 999999999999999853 45889999999999999999999999 99999999999999999999999999976543
Q ss_pred C-----CccccCCccCCcccccCCc----CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 226 G-----KSYSTNLAYTPPEYLRNGR----VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 226 ~-----~~~~~t~~y~aPE~~~~~~----~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
. ....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+... .
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-----------~-------- 255 (371)
T cd05622 195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-----------T-------- 255 (371)
T ss_pred CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-----------H--------
Confidence 2 2456899999999997543 7889999999999999999999997543210 0
Q ss_pred chhhcccc--cCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhcc
Q 009750 297 ILHLMDSH--LEGNFSSEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~--Rpt~~~vl~~L~~ 344 (527)
...+.... .........+..+.+||.+||..++.+ |+++.++++|.+.
T Consensus 256 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~ 307 (371)
T cd05622 256 YSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 307 (371)
T ss_pred HHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence 11111110 111112235667889999999844433 7899999998764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=326.44 Aligned_cols=251 Identities=20% Similarity=0.310 Sum_probs=200.6
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCe------e
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDE------R 145 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~ 145 (527)
+.+.||+|+||.||+|........+..||||+++...... .+.+.+|+++++.++||||+++++++..... .
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05035 3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKP 82 (273)
T ss_pred cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCccc
Confidence 5667899999999999987643345789999987643322 3578999999999999999999999876554 7
Q ss_pred eEEEEecCCCCHhHHhhhc----CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 146 LLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
++||||+++|+|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++
T Consensus 83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCcccee
Confidence 9999999999999998542 2246899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCc------cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 222 NSRDGKS------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 222 ~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
....... ...+..|+|||.+.+..++.++|||||||++|||++ |..||...+... .....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~-----------~~~~~-- 228 (273)
T cd05035 162 KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE-----------IYDYL-- 228 (273)
T ss_pred eccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-----------HHHHH--
Confidence 6543321 223568999999988889999999999999999999 778875432110 00111
Q ss_pred CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
........+...+..+.+++.+||+.||.+|||+.+++++|+.+
T Consensus 229 -------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 229 -------RHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -------HcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111123344566799999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=340.15 Aligned_cols=239 Identities=21% Similarity=0.264 Sum_probs=192.7
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHH-HhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAW-GVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||.||+|++.. +++.||||++.+... .....+.+|+. +++.++||||+++++++.+.+..++||||+
T Consensus 2 ~lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (321)
T cd05603 2 VIGKGSFGKVLLAKRKS---DGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYV 78 (321)
T ss_pred eeeeCCCEEEEEEEECC---CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCC
Confidence 57999999999999987 788999999875422 12334555554 678899999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05603 79 NGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST 155 (321)
T ss_pred CCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccc
Confidence 9999998886 4467889999999999999999999999 99999999999999999999999999875322 234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..+|+.|+|||++.+..++.++|||||||++|||++|+.||...+... .. ..+... ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----------~~--------~~i~~~--~~~ 214 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ-----------MY--------DNILHK--PLQ 214 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH-----------HH--------HHHhcC--CCC
Confidence 568999999999998889999999999999999999999986543110 00 011111 112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHH----HHHHHh
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTK----DLVSTL 342 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~----~vl~~L 342 (527)
++...+..+.+++.+||+.||.+||++. +++++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~ 252 (321)
T cd05603 215 LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHV 252 (321)
T ss_pred CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCC
Confidence 3334456788999999999999998764 555544
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=331.91 Aligned_cols=256 Identities=22% Similarity=0.261 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 147 (527)
+++.+.+.||.|+||.||+|.+.... ....+++|.++.... ...+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDG-LKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCC-CcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 34557778899999999999987622 223478888874322 2245789999999999 79999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCce
Q 009750 148 VAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPR 213 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~k 213 (527)
||||+++++|.+++.... ...+++..++.++.||+.||+|||+.+ ++||||||+|||++.++.+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEE
Confidence 999999999999996421 135889999999999999999999999 99999999999999999999
Q ss_pred eecccCccccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHH
Q 009750 214 LSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 214 l~DFG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
|+|||++...... .....+..|+|||++.+..++.++|||||||++|||++ |..||....... ..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-----------~~ 228 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-----------LY 228 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----------HH
Confidence 9999998643321 11123457999999988889999999999999999998 988886432110 00
Q ss_pred HHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 290 DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
. .+........+...+..+.+|+.+||+.+|.+|||+.++++.|+.+..
T Consensus 229 ~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 229 E---------KLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred H---------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1 111111122233455678999999999999999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=338.23 Aligned_cols=234 Identities=23% Similarity=0.256 Sum_probs=189.8
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHH-HHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEA-WGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~-~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||+||+|.+.. +++.||+|++..... .....+..|. .+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~ 78 (325)
T cd05602 2 VIGKGSFGKVLLARHKA---EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI 78 (325)
T ss_pred eeeeCCCeEEEEEEECC---CCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCC
Confidence 57999999999999987 788899999875421 1223444454 4568889999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~ 155 (325)
T cd05602 79 NGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTST 155 (325)
T ss_pred CCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccc
Confidence 9999999997 4456888999999999999999999999 99999999999999999999999999875322 234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...+... .. ..+.... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----------~~--------~~i~~~~--~~ 214 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-----------MY--------DNILNKP--LQ 214 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-----------HH--------HHHHhCC--cC
Confidence 568999999999999999999999999999999999999986543111 00 0111111 11
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKD 337 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~ 337 (527)
++...+..+.+++.+||+.||.+||++.+
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 215 LKPNITNSARHLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 23344567889999999999999998763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=324.27 Aligned_cols=244 Identities=25% Similarity=0.359 Sum_probs=198.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
..+.+.||+|+||.||+|.+. ++..+|||++.... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWR----GKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred cchhhhhccCCCceEEEeEec----CCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 446778899999999999886 44569999986543 2346789999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc--c
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS--Y 229 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--~ 229 (527)
+++++|.+++... ...+++..++.++.||+.||.|||+.+ ++||||||+||++++++.+||+|||+++...+... .
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (256)
T cd05059 81 MANGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS 158 (256)
T ss_pred CCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceeccccccccc
Confidence 9999999999642 347899999999999999999999999 99999999999999999999999999876543321 1
Q ss_pred ---ccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 230 ---STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 230 ---~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
.++..|+|||.+.+..++.++|||||||++|||++ |+.||...+... .... +....
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----------~~~~---------~~~~~ 218 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-----------VVES---------VSAGY 218 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-----------HHHH---------HHcCC
Confidence 12357999999998899999999999999999999 788875432110 0000 11111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
....+...+..+.+|+.+||..+|++|||+.++++.|
T Consensus 219 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 219 RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1222334566799999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=309.12 Aligned_cols=249 Identities=19% Similarity=0.231 Sum_probs=201.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 148 (527)
+-.+++.||.|+.|.||+++.+. +|+..|||.+.+... +..+++...++++.+- +.|.||+.+|+|..+..++|.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs---~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic 169 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRS---TGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC 169 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcc---cceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence 34468889999999999999998 899999999987642 3356788888887776 489999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
||.|.- -+..+++. -.+++++..+-++...+++||.||..+..|||||+||+|||+|+.|.+||||||++....+.
T Consensus 170 MelMs~-C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 170 MELMST-CAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHHHHH-HHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc
Confidence 999843 45555543 56779999999999999999999988766999999999999999999999999999765543
Q ss_pred -CccccCCccCCcccccC---CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 -KSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
+...|.+.|||||.+.- ..|+.++||||||++|+||.||+.||++.+.... ... .+++
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe----------~lt--------kvln 309 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE----------VLT--------KVLN 309 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH----------HHH--------HHHh
Confidence 34578899999999954 3589999999999999999999999987643211 111 1222
Q ss_pred cccCCCCC--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 303 SHLEGNFS--SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 303 ~~~~~~~~--~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
. ..+..+ ...++.+++++..||.+|+.+||...++++|-.
T Consensus 310 ~-ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~F 351 (391)
T KOG0983|consen 310 E-EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPF 351 (391)
T ss_pred c-CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcc
Confidence 1 111111 225778999999999999999999999998743
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=343.31 Aligned_cols=257 Identities=20% Similarity=0.167 Sum_probs=195.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+.+.||.|+||.||+|.+.. +++.||||... ...+.+|+.+|++|+|+|||++++++...+..+||||+
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~---~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPD---YPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECC---CCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4567789999999999999987 77889999642 23577899999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----- 226 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----- 226 (527)
+. ++|..++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 242 ~~-~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 318 (461)
T PHA03211 242 YR-SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPF 318 (461)
T ss_pred cC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceeccccccccc
Confidence 95 689888864 3357999999999999999999999999 999999999999999999999999998764332
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc-----h--
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI-----L-- 298 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-- 298 (527)
....||+.|+|||++.+..++.++|||||||+||||++|..++.......... +. .......+..... .
T Consensus 319 ~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~-~~--~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 319 HYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERR-PY--DAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred ccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccC-Cc--HHHHHHHHHhhccccccCCCC
Confidence 13468999999999999999999999999999999999887654322110000 00 0000000000000 0
Q ss_pred ------h-h--------cccccCCCCC--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 299 ------H-L--------MDSHLEGNFS--SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 299 ------~-~--------~~~~~~~~~~--~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
. . ........+. ...+..+.+||.+||+.||.+|||+.|+|+|-+
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~ 457 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL 457 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence 0 0 0000000000 022346889999999999999999999999854
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=343.17 Aligned_cols=253 Identities=20% Similarity=0.284 Sum_probs=201.9
Q ss_pred cccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.+.||+|+||.||+|++... ...++.||||+++...... .+.+.+|+++|.++. |||||+++++|...+..+||
T Consensus 40 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv 119 (401)
T cd05107 40 VLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYII 119 (401)
T ss_pred ehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEE
Confidence 3667899999999999997531 1255789999998654322 347899999999997 99999999999999999999
Q ss_pred EEecCCCCHhHHhhhcC---------------------------------------------------------------
Q 009750 149 AEYMPNDTLAKHLFHWE--------------------------------------------------------------- 165 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~--------------------------------------------------------------- 165 (527)
|||+++|+|.++++...
T Consensus 120 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (401)
T cd05107 120 TEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTV 199 (401)
T ss_pred EeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhh
Confidence 99999999999996421
Q ss_pred ---------------------------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCc
Q 009750 166 ---------------------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212 (527)
Q Consensus 166 ---------------------------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~ 212 (527)
...+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~~~ 278 (401)
T cd05107 200 KYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGKLV 278 (401)
T ss_pred hhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCCEE
Confidence 123677888999999999999999998 9999999999999999999
Q ss_pred eeecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccch
Q 009750 213 RLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 213 kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 285 (527)
||+|||+++..... ....++..|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 279 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-------- 350 (401)
T cd05107 279 KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-------- 350 (401)
T ss_pred EEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH--------
Confidence 99999998754321 12345778999999998889999999999999999998 8888754321100
Q ss_pred hhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
....+....+...+...+..+.+|+.+||..+|.+||++.+++..|+.+
T Consensus 351 -----------~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 351 -----------FYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred -----------HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0011111111223334567799999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=323.70 Aligned_cols=246 Identities=24% Similarity=0.356 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEE-eCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC-DGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~-~~~~~~lv~ 149 (527)
.+.+.+.||+|+||.||++... ++.||+|.++... ..+.+.+|+.++++++|+||+++++++. ..+..++||
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEc-----CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 4457788899999999999774 5669999986543 3567999999999999999999999865 456789999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-c
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-S 228 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 228 (527)
||+++++|.+++.......+++..++.++.||+.||.|||+++ ++||||||+||++++++.+||+|||++....... .
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 158 (256)
T cd05082 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 158 (256)
T ss_pred ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCC
Confidence 9999999999997645556899999999999999999999999 9999999999999999999999999987654332 3
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...+..|+|||++.+..++.++|||||||++|||++ |+.||+..+... ... .+......
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-----------~~~---------~~~~~~~~ 218 (256)
T cd05082 159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----------VVP---------RVEKGYKM 218 (256)
T ss_pred CccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-----------HHH---------HHhcCCCC
Confidence 344568999999988889999999999999999998 888875432110 000 01111112
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..+...+..+.+++.+||+.+|.+|||+.++++.|+.
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 219 DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 2333456778999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=330.58 Aligned_cols=250 Identities=19% Similarity=0.245 Sum_probs=203.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+.||+|+||+||++.+.. +++.||||.+....... ...+.+|+.++++++|+||+.+++.+.+.+..++|||
T Consensus 4 ~~~~ig~G~~g~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 4 QYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred eeEEeecCCCeEEEEEEEcC---CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 45667999999999999988 78899999987653322 2457889999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 159 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 159 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCcccc
Confidence 999999999986544557999999999999999999999999 9999999999999999999999999987654332
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...++..|+|||++.+..++.++|||||||++|+|++|+.||........ .. ....+... ...
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-----------~~-----~~~~~~~~-~~~ 222 (285)
T cd05630 160 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-----------RE-----EVERLVKE-VQE 222 (285)
T ss_pred CCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-----------HH-----HHHhhhhh-hhh
Confidence 34678999999999988999999999999999999999999865321100 00 00000000 011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLAP 344 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~~ 344 (527)
.++...+..+.+|+.+||+.||.+||| +.++++|-+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~ 264 (285)
T cd05630 223 EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLF 264 (285)
T ss_pred hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhh
Confidence 123334566889999999999999999 8899988654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=331.00 Aligned_cols=253 Identities=22% Similarity=0.307 Sum_probs=203.4
Q ss_pred cccccCCCCCCCeEEEEEecCCC--CCceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 148 (527)
.++..||+|+||.||++...... .....+|+|.+..... .....+.+|++++.++ +|+||+++++++...+.+++|
T Consensus 15 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li 94 (293)
T cd05053 15 TLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVV 94 (293)
T ss_pred EEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEE
Confidence 36678899999999999886422 2457899999875432 1234688999999999 899999999999999999999
Q ss_pred EEecCCCCHhHHhhhc--------------CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCcee
Q 009750 149 AEYMPNDTLAKHLFHW--------------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRL 214 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl 214 (527)
|||+++|+|..++... ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||
T Consensus 95 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~kL 173 (293)
T cd05053 95 VEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMKI 173 (293)
T ss_pred EEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEEe
Confidence 9999999999999642 2356899999999999999999999999 999999999999999999999
Q ss_pred ecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhh
Q 009750 215 SCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFG 287 (527)
Q Consensus 215 ~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 287 (527)
+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 174 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----------- 242 (293)
T cd05053 174 ADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE----------- 242 (293)
T ss_pred CccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-----------
Confidence 9999997654322 1223567999999988889999999999999999998 888876432110
Q ss_pred HHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 288 ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
. ...+........+...+..+.+|+.+||..||.+|||+.++++.|+.+.
T Consensus 243 ~---------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 L---------FKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred H---------HHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 0 1111111122233445667899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-43 Score=316.60 Aligned_cols=241 Identities=21% Similarity=0.251 Sum_probs=207.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChH---HHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK---QFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~---~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.++.||+|.||.|.+|+.+. +++.+|||++++......+ .-..|-.+|+..+||.+..|.-.|...+.+|+|||
T Consensus 172 fLKvLGkGTFGKVIL~rEKa---t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMe 248 (516)
T KOG0690|consen 172 FLKVLGKGTFGKVILCREKA---TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVME 248 (516)
T ss_pred HHHHhcCCccceEEEEeecc---cCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEE
Confidence 68889999999999999998 9999999999987654433 45678999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc----CCC
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS----RDG 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~----~~~ 226 (527)
|+.||.|+-+|. +...+++...+.+...|+.||.|||+.+ ||+||||.+|+|||++|++||+|||+++.. ...
T Consensus 249 yanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~ 325 (516)
T KOG0690|consen 249 YANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTT 325 (516)
T ss_pred EccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhccccccee
Confidence 999999999997 5567999999999999999999999998 999999999999999999999999999753 234
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
++++|||.|+|||++....|+.++|+|.+|||+|||++|+.||...+.. .-+.-|+-. .
T Consensus 326 kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~-------------------kLFeLIl~e--d 384 (516)
T KOG0690|consen 326 KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE-------------------KLFELILME--D 384 (516)
T ss_pred ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh-------------------HHHHHHHhh--h
Confidence 6889999999999999999999999999999999999999999754311 111111111 1
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVST 341 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~ 341 (527)
..||...++++..|+..+|.+||.+|. .+.||.+|
T Consensus 385 ~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 385 LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 247788888999999999999999995 35566555
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=328.25 Aligned_cols=250 Identities=20% Similarity=0.332 Sum_probs=197.8
Q ss_pred cccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+.||+|+||.||+|.+... ...++.||||++..... ....++.+|+.+++.++||||+++++++......++||
T Consensus 9 ~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 88 (277)
T cd05062 9 TMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 88 (277)
T ss_pred eeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEE
Confidence 3567789999999999987531 12457799999865332 22346899999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcC--------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 150 EYMPNDTLAKHLFHWE--------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+|||+++++.+||+|||++.
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~~ 167 (277)
T cd05062 89 ELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 167 (277)
T ss_pred ecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCcc
Confidence 9999999999986422 124678899999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 222 NSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 222 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||.+..... .....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~-----------~~~~~-- 234 (277)
T cd05062 168 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ-----------VLRFV-- 234 (277)
T ss_pred ccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----------HHHHH--
Confidence 543321 2234678999999998889999999999999999999 677775432110 00101
Q ss_pred CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
... .....+...+..+.+++.+||+.||.+|||+.+++++|+
T Consensus 235 ------~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 235 ------MEG-GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ------HcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 010 011123334567899999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=328.03 Aligned_cols=243 Identities=22% Similarity=0.341 Sum_probs=192.1
Q ss_pred cCCCCCCCeEEEEEecCC---------------------CCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCcccee
Q 009750 77 ESGEKAPNVVYKGRLQDG---------------------NDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANL 135 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~---------------------~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 135 (527)
.||+|+||.||+|..... ......|++|++..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 579999999999986321 11234589999876543334578899999999999999999
Q ss_pred EEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-----
Q 009750 136 IGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----- 210 (527)
Q Consensus 136 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~----- 210 (527)
+++|......++||||+++|+|..++.. ..+.+++..++.++.||++||.|||+++ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999999864 3457899999999999999999999999 99999999999998654
Q ss_pred --CceeecccCccccCCCCccccCCccCCcccccC-CcCCCCcccchhhHHHHHHH-hCCCCCCCCCccccccccccchh
Q 009750 211 --DPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLL-SGKHIPPSHDMVVWNTVPIKFNF 286 (527)
Q Consensus 211 --~~kl~DFG~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~ell-tg~~p~~~~~~~~~~~~~~~~~~ 286 (527)
.+|++|||++..........++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||.......
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---------- 229 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE---------- 229 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH----------
Confidence 379999999876554455567888999999876 45899999999999999995 6888875432110
Q ss_pred hHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
......... ..+......+.++|.+||+.+|++|||+.+++++|.
T Consensus 230 ----------~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 ----------KERFYEKKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ----------HHHHHHhcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 000011100 112222356889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-42 Score=338.63 Aligned_cols=238 Identities=20% Similarity=0.244 Sum_probs=192.4
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHH-HhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAW-GVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||+|+||+||+|.... +|+.||||++.+... .....+..|.. +++.++||||+++++++...+..++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~ 78 (325)
T cd05604 2 VIGKGSFGKVLLAKRKL---DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFV 78 (325)
T ss_pred ceeeCCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCC
Confidence 47999999999999987 789999999975422 12345566655 567789999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CCc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GKS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~~ 228 (527)
++|+|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ...
T Consensus 79 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (325)
T cd05604 79 NGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT 155 (325)
T ss_pred CCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccc
Confidence 9999999886 4567899999999999999999999999 99999999999999999999999999875322 234
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..||+.|+|||++.+..++.++|||||||++|||++|..||...+... .. ..+..... .
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-----------~~--------~~~~~~~~--~ 214 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE-----------MY--------DNILHKPL--V 214 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH-----------HH--------HHHHcCCc--c
Confidence 568999999999999999999999999999999999999986543110 00 01111111 1
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHH----HHHHH
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTK----DLVST 341 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~----~vl~~ 341 (527)
.+...+..+.+++.+||+.||.+||++. ++++|
T Consensus 215 ~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h 251 (325)
T cd05604 215 LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEH 251 (325)
T ss_pred CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence 1223456688999999999999999875 55554
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-42 Score=327.50 Aligned_cols=243 Identities=24% Similarity=0.365 Sum_probs=194.7
Q ss_pred cCCCCCCCeEEEEEecCCCC----CceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGND----NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~----~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||.|+||.||+|....... ....||+|.+........+.+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 57999999999998865211 23458888886554444567899999999999999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC--------ceeecccCccccC
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD--------PRLSCFGLMKNSR 224 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~--------~kl~DFG~a~~~~ 224 (527)
++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++. ++++|||++....
T Consensus 82 ~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 82 KFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred CCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 99999999974 2346899999999999999999999999 999999999999987765 5999999987766
Q ss_pred CCCccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCC-CCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 225 DGKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKH-IPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 225 ~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
......+++.|+|||++.+. .++.++|||||||++|||++|.. |+...+... ......
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--------------------~~~~~~ 219 (258)
T cd05078 160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--------------------KLQFYE 219 (258)
T ss_pred CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--------------------HHHHHH
Confidence 66666788999999999874 57899999999999999999964 443211000 000001
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
. ...++......+.+|+.+||+.||++|||++++++.|.
T Consensus 220 ~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 D--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred c--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1 11223333466889999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=324.47 Aligned_cols=255 Identities=16% Similarity=0.189 Sum_probs=206.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+.+.||.|+||.||++.... +++.||||.+....... .+++.+|+.+++.++||||+++++++..++..++
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~ 79 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLL---DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 79 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecC---CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEE
Confidence 34467788999999999999877 78889999887543222 3578899999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 148 VAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
+|||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999999988632 2456899999999999999999999999 99999999999999999999999999876543
Q ss_pred CC----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 226 GK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 226 ~~----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
.. ...++..|+|||++.+..++.++||||||+++|+|++|..||.+...... ... ..+.
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------------~~~-----~~~~ 221 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY------------SLC-----KKIE 221 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH------------HHh-----hhhh
Confidence 32 34678899999999888899999999999999999999999864321110 000 0000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
........+...+..+.+++.+||+.||.+|||+.+|++.+..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 222 QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred cCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 001111112345677999999999999999999999999887653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=323.27 Aligned_cols=246 Identities=23% Similarity=0.329 Sum_probs=201.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+++.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.++++++|+||+++++++. .+..++||||
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~----~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 8 LKLVKKLGAGQFGEVWMGYYN----GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred ceeeeeeccCccceEEeeecC----CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 447788999999999999876 56779999987544 34578999999999999999999999874 4678999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc
Confidence 99999999997555567899999999999999999999999 9999999999999999999999999987654221
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...++..|+|||++.+..++.++|||||||++|||++ |+.||...+... .... +....
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----------~~~~---------~~~~~ 220 (260)
T cd05067 161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-----------VIQN---------LERGY 220 (260)
T ss_pred cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-----------HHHH---------HHcCC
Confidence 2234568999999988889999999999999999999 999886542110 0000 11111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...+..+.+++.+||..+|++|||+++++..|+.
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 221 RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 112233345679999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-42 Score=337.44 Aligned_cols=241 Identities=17% Similarity=0.215 Sum_probs=196.7
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~ 149 (527)
++..||+|+||+||+|.... +++.||||++++.. ....+.+..|+.++..+. |++|+++++++...+.+++||
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 4 FLMVLGKGSFGKVMLAERKG---TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred EEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 55678999999999999987 78899999997542 223456888999999885 577888999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---- 225 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~---- 225 (527)
||+++|+|..++. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 81 EYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred cCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence 9999999999986 4467999999999999999999999999 99999999999999999999999999875322
Q ss_pred CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 226 GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 226 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+... . ...+....
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-----------~--------~~~i~~~~- 217 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE-----------L--------FQSIMEHN- 217 (323)
T ss_pred ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH-----------H--------HHHHHhCC-
Confidence 224568999999999998889999999999999999999999986542110 0 01111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNT-----KDLVST 341 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~-----~~vl~~ 341 (527)
..++...+..+.+++.+||+.||.+|++. .++++|
T Consensus 218 -~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 218 -VSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred -CCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 12334455678899999999999999974 455554
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=323.05 Aligned_cols=243 Identities=17% Similarity=0.320 Sum_probs=193.4
Q ss_pred cCCCCCCCeEEEEEecCCC---------CCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 77 ESGEKAPNVVYKGRLQDGN---------DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~---------~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.||+|+||.||+|...... .....|++|.+..........|.+|+.+++.++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 5799999999999864311 1234689999876554445678999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC-------ceeecccCc
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD-------PRLSCFGLM 220 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~-------~kl~DFG~a 220 (527)
||||+++|+|..++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. +|++|||++
T Consensus 82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999999988863 3456899999999999999999999999 999999999999987664 899999998
Q ss_pred cccCCCCccccCCccCCccccc-CCcCCCCcccchhhHHHHHHH-hCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 221 KNSRDGKSYSTNLAYTPPEYLR-NGRVTPESVIFSFGTVLLDLL-SGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 221 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DvwslGvvl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
..........++..|+|||++. +..++.++|||||||++|||+ +|..|+....... ..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------------~~-------- 219 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE------------KE-------- 219 (262)
T ss_pred ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH------------HH--------
Confidence 7766655667888999999986 456899999999999999998 4777764321100 00
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+...... .....+..+.+|+.+||+.||.+||++.+++++|.
T Consensus 220 ~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 220 RFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 00000000 11112456889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=322.34 Aligned_cols=246 Identities=23% Similarity=0.346 Sum_probs=200.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+++.||+|+||.||+|... .+..||+|.+..... ..+.+.+|+.++++++|+||+++++++. ....++||||
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~----~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWN----GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred hhhhheeccccCceEEEEEec----CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 447788999999999999876 445699999876443 4567999999999999999999999885 4568999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++++|.+++.......+++..++.++.+++.||.|||+.+ ++||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05070 82 MSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccc
Confidence 99999999997544556899999999999999999999999 9999999999999999999999999987654321
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...++..|+|||++.+..++.++|||||||++|||++ |..||...+... .... +....
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-----------~~~~---------~~~~~ 220 (260)
T cd05070 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-----------VLEQ---------VERGY 220 (260)
T ss_pred cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-----------HHHH---------HHcCC
Confidence 1234567999999988889999999999999999999 888886532110 0011 11111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...+..+.+|+.+||..+|.+|||+.++++.|+.
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 221 RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 122334456679999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-41 Score=321.84 Aligned_cols=247 Identities=25% Similarity=0.332 Sum_probs=199.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.++++||+|+||.||+|.+.. + ..||||+++... ...+.+.+|+.++++++||||+++++++. ....++||||
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~---~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 8 LRLEVKLGQGCFGEVWMGTWNG---T-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred eeEeeecCCCCCCcEEEEEecC---C-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 5578889999999999998864 3 459999997543 24568999999999999999999999875 4568999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++|+|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||.+.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~ 160 (262)
T cd05071 82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 160 (262)
T ss_pred CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccc
Confidence 99999999997544456899999999999999999999999 9999999999999999999999999987654332
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...++..|+|||+..+..++.++|||||||++|||+| |..||....... .... + ....
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-----------~~~~--------~-~~~~ 220 (262)
T cd05071 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----------VLDQ--------V-ERGY 220 (262)
T ss_pred cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-----------HHHH--------H-hcCC
Confidence 2234567999999988889999999999999999999 777775432110 0010 0 0111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
....+...+..+.+|+.+||+.||++||++.++++.|+..
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 221 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 1122344567789999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=329.13 Aligned_cols=259 Identities=19% Similarity=0.221 Sum_probs=207.5
Q ss_pred HHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEE
Q 009750 61 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC 140 (527)
Q Consensus 61 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 140 (527)
++.+.....+.+.+++.||.|+||.||+|.+.. +++.|++|.+........+.+.+|+.+++.++||||+++++.+.
T Consensus 3 ~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 79 (292)
T cd06644 3 HVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKE---TGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79 (292)
T ss_pred hhhcccCcchhhhhhheecCCCCeEEEEEEECC---CCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE
Confidence 344444455667789999999999999999987 78899999997665444567899999999999999999999999
Q ss_pred eCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCc
Q 009750 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 141 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
.++..++||||+++++|..++.. ....+++..++.++.||+.+|.|||+.+ ++||||||+||+++.++.+||+|||++
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~ 157 (292)
T cd06644 80 WDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVS 157 (292)
T ss_pred eCCeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccc
Confidence 99999999999999999888754 3456899999999999999999999998 999999999999999999999999998
Q ss_pred cccCCC----CccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHH
Q 009750 221 KNSRDG----KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 221 ~~~~~~----~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
...... ....+++.|+|||++. ...++.++|||||||++|||++|..||...+... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----------~~-- 224 (292)
T cd06644 158 AKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-----------VL-- 224 (292)
T ss_pred eeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-----------HH--
Confidence 653322 2345788999999985 3447889999999999999999999875432100 00
Q ss_pred HhcCcchhhccccc-CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 292 IRGKNILHLMDSHL-EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 292 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..+..... ....+...+..+.+++.+||..||++||++.+++++-.
T Consensus 225 ------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 271 (292)
T cd06644 225 ------LKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF 271 (292)
T ss_pred ------HHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 00000000 01123344567889999999999999999999998744
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=330.34 Aligned_cols=252 Identities=17% Similarity=0.251 Sum_probs=208.1
Q ss_pred hcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 66 TNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 66 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
.+....+.+++.||.|+||.||+|.... +++.||||.+........+.+.+|+.+++.++|+||+++++++......
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 15 GDPKKKYTRFEKIGQGASGTVYTAIDIA---TGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 91 (297)
T ss_pred CChhhhceeeeeeccCCCeEEEEEEECC---CCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEE
Confidence 3334556678889999999999999876 7889999999866555567789999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++||||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++.....
T Consensus 92 ~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 92 WVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred EEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 99999999999999985 346889999999999999999999999 99999999999999999999999999876543
Q ss_pred CC----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 226 GK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 226 ~~----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
.. ...+++.|+|||.+.+..++.++|||||||++|+|++|..||...+.... ...+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-------------------~~~~~ 228 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-------------------LYLIA 228 (297)
T ss_pred CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-------------------eeeec
Confidence 32 34678899999999988899999999999999999999999865432110 00000
Q ss_pred -ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 302 -DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 302 -~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
........+...+..+.+|+.+||..||.+||++.+++++-+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (297)
T cd06656 229 TNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPF 271 (297)
T ss_pred cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence 000011123345566889999999999999999999998743
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=323.29 Aligned_cols=245 Identities=19% Similarity=0.248 Sum_probs=201.2
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-----ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+.||.|++|.||+|.... +++.||+|.+...... ..+.+.+|++++++++||||+++++++......++|
T Consensus 6 ~~~~lg~g~~~~vy~~~~~~---~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 6 RGKLLGQGAFGRVYLCYDVD---TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred ccceecCCCceEEEEEEEcC---CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 45677999999999999876 7889999998754321 124688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++.....
T Consensus 83 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 83 MEYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEECCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999999997 3456899999999999999999999999 999999999999999999999999998754322
Q ss_pred -----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 227 -----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
....++..|+|||++.+..++.++|||||||++|||++|+.||...+... ......
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------------------~~~~~~ 220 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA-------------------AIFKIA 220 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH-------------------HHHHHh
Confidence 22456788999999998889999999999999999999999985421100 000111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
........+...+..+.+++.+||..+|.+|||+.+++++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 262 (263)
T cd06625 221 TQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262 (263)
T ss_pred ccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence 111122334455677899999999999999999999998753
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=327.09 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=201.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCC-CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..++..||.|+||+||+|.+.... .....||||+++..... ..+.+.+|+.++..++||||+++++++.. ...+++|
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~ 87 (279)
T cd05109 9 LKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVT 87 (279)
T ss_pred eeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEE
Confidence 346778899999999999876521 11235899998754322 24578999999999999999999999975 4578999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc-
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS- 228 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 228 (527)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++.......
T Consensus 88 ~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~ 165 (279)
T cd05109 88 QLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 165 (279)
T ss_pred EcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccce
Confidence 99999999999964 3456899999999999999999999999 99999999999999999999999999886543221
Q ss_pred -----cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 229 -----YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 229 -----~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
..+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .....+.
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------------------~~~~~~~ 225 (279)
T cd05109 166 YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--------------------EIPDLLE 225 (279)
T ss_pred eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------------------HHHHHHH
Confidence 123567999999998889999999999999999998 88887532210 0111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
.......+...+..+.+++.+||+.||++||++.+++..|..+...+
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 226 KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 11111223345567889999999999999999999999998775533
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=333.27 Aligned_cols=269 Identities=19% Similarity=0.249 Sum_probs=202.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
..+.+++.||+|+||.||+|++.. +++.||||+++..... ....+.+|+.++++++||||+++++++..++..++|
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKL---TENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecC---CCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 346678899999999999999987 7788999998755332 345688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++ +|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 83 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 83 FEYLDK-DLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred EeCCCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 999976 88888864 3456889999999999999999999999 999999999999999999999999998754322
Q ss_pred --CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHhcC-cch
Q 009750 227 --KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIRGK-NIL 298 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~ 298 (527)
....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||++.+.......... .....+...... ...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 23456889999999865 4588999999999999999999999976543211000000 000000000000 000
Q ss_pred hhcccccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 299 HLMDSHLEG----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 299 ~~~~~~~~~----~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......... ......+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~ 289 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYF 289 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhh
Confidence 000000000 0011245678899999999999999999999998664
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=339.68 Aligned_cols=247 Identities=22% Similarity=0.308 Sum_probs=213.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
+.++||+|.||.|++|.+...+.+...||||.++..... ...+|++|+.+|.+|+|||+|+|||+..+ ....||||++
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 456789999999999999886555667999999877654 46789999999999999999999999987 7789999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCccc--
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS-- 230 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-- 230 (527)
+.|+|.+.|+......|.......++.||+.||.||.+++ +|||||..+||||-..-.+||+|||+.+.+.....+.
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 9999999998756677888999999999999999999999 9999999999999999999999999999877654321
Q ss_pred -----cCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 231 -----TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 231 -----~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....|+|||.+....++.++|||+|||+||||+| |..|+.+.. +..+.+.++..
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~--------------------g~qIL~~iD~~ 331 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR--------------------GIQILKNIDAG 331 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC--------------------HHHHHHhcccc
Confidence 2457999999999999999999999999999999 567776532 33345555555
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
-+...|..|++++.+++..||..+|++|||+..+.+.+
T Consensus 332 erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 332 ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 55667888999999999999999999999999997543
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=329.57 Aligned_cols=259 Identities=18% Similarity=0.179 Sum_probs=197.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcC---CCCccceeEEEEEeC----
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL---RHKRLANLIGYCCDG---- 142 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~---- 142 (527)
+.+++.||+|+||+||+|.+.. +++.||||.++..... ....+.+|+.+++.+ +||||+++++++...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~ 78 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPH---SGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR 78 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECC---CCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence 3467788999999999999987 7899999998764322 234577788888776 699999999998642
Q ss_pred -CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 143 -DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 143 -~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
...++||||+++ +|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.
T Consensus 79 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 79 ETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred CceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCccc
Confidence 457999999975 8999887544556899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc---C
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG---K 295 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 295 (527)
..... ....+|..|+|||++.+..++.++|||||||++|||++|++||.+........ ........ .
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~-------~~~~~~~~~~~~ 229 (288)
T cd07863 157 IYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG-------KIFDLIGLPPED 229 (288)
T ss_pred cccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHH-------HHHHHhCCCChh
Confidence 65432 23467889999999998889999999999999999999999986543211000 00000000 0
Q ss_pred cchh-------hcccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 296 NILH-------LMDSHLE---GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 296 ~~~~-------~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.... ....... .......+..+.+|+.+||+.||++|||+.+++.|-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp 286 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHP 286 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence 0000 0000000 001123456688999999999999999999999763
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=321.78 Aligned_cols=245 Identities=17% Similarity=0.197 Sum_probs=203.1
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC-CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
.+++.||.|+||.||++.+.. +++.||+|.++... ....+.+.+|+.+++.++|+||+++++.+...+.+++||||
T Consensus 3 ~~~~~lg~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 3 NVLRVVGEGSFGRALLVQHVN---SDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred eEEEEeeccCCeEEEEEEEcC---CCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 467788999999999999987 78889999986433 22346788999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----C
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----K 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~ 227 (527)
+++|+|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYAC 158 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccc
Confidence 99999999987545567899999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...+++.|+|||++.+..++.++|+||||+++|+|++|..||...+... .. ..+. .....
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-----------~~--------~~~~-~~~~~ 218 (255)
T cd08219 159 TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN-----------LI--------LKVC-QGSYK 218 (255)
T ss_pred cccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH-----------HH--------HHHh-cCCCC
Confidence 3467889999999988889999999999999999999999986432110 00 0010 01111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..+...+..+.+|+.+||+.||.+|||+.+++..
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 2233455678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=322.75 Aligned_cols=248 Identities=21% Similarity=0.308 Sum_probs=194.3
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEE-eCCeeeEEEEecCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCC-DGDERLLVAEYMPN 154 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~-~~~~~~lv~E~~~~ 154 (527)
.||+|+||.||+|.+.........||||++..... ...+.+.+|+.+++.++||||+++++++. .++..++||||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 46999999999999765444567899999864322 23457889999999999999999999876 45568999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--------
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-------- 226 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-------- 226 (527)
|+|.+++.. ....+++..++.++.||++||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 999999964 2345678888999999999999999998 999999999999999999999999998754321
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCC-CCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK-HIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....++..|+|||.+.+..++.++|||||||++|||++|. +||...+... ..... ....
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~-----------~~~~~---------~~~~ 219 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD-----------ITVYL---------LQGR 219 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-----------HHHHH---------hcCC
Confidence 1223466899999998888999999999999999999965 4554321100 00000 0001
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
....+...+..+.+++.+||..+|++||++.++++.|+.+.
T Consensus 220 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 220 RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 11122233567889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=321.45 Aligned_cols=245 Identities=25% Similarity=0.353 Sum_probs=198.4
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
+||+|+||.||+|.+...+..+..||+|.+...... ..+++.+|+.+++.++|||||++++++. ....++||||+++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~ 80 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLG 80 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCC
Confidence 579999999999988764334478999999866543 3457999999999999999999999876 45689999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCcc------
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY------ 229 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~------ 229 (527)
+|.+++.. ...+++..++.++.|++.||.|||..+ ++|+||||+|||++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 157 (257)
T cd05060 81 PLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA 157 (257)
T ss_pred cHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence 99999973 347899999999999999999999999 999999999999999999999999998765433221
Q ss_pred -ccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 230 -STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 230 -~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
.++..|+|||.+.+..++.++|||||||++|||++ |..||...+... ....+......
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~--------------------~~~~~~~~~~~ 217 (257)
T cd05060 158 GRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE--------------------VIAMLESGERL 217 (257)
T ss_pred ccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH--------------------HHHHHHcCCcC
Confidence 12357999999988889999999999999999998 888875432110 00111111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
..+...+..+.+++.+||..+|.+||++.++++.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 218 PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 23334456789999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=325.04 Aligned_cols=253 Identities=22% Similarity=0.295 Sum_probs=202.1
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+.+.||+|+||.||+|.+......+..||||+++.... ...++|..|+.+++.++||||+++++++..+...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 34467788999999999999876433345799999876432 22457999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc-
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS- 228 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 228 (527)
||+++++|.+++.. ..+.+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 85 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 162 (269)
T cd05065 85 EFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 162 (269)
T ss_pred ecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence 99999999999964 3456899999999999999999999999 99999999999999999999999999875433211
Q ss_pred ------cc--cCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 229 ------YS--TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 229 ------~~--~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
.. .+..|+|||++.+..++.++|||||||++|||++ |..||...+... .....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-----------~~~~i------- 224 (269)
T cd05065 163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-----------VINAI------- 224 (269)
T ss_pred cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-----------HHHHH-------
Confidence 11 1347999999998899999999999999999987 988875432110 00001
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
........+...+..+.+++.+||..+|.+||++.+++..|+.+
T Consensus 225 --~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 225 --EQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --HcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111122334456788999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-41 Score=329.56 Aligned_cols=253 Identities=21% Similarity=0.293 Sum_probs=202.2
Q ss_pred cccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.+.||+|+||.||++..... ...+..||||+++...... .+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus 38 ~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 117 (302)
T cd05055 38 SFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVI 117 (302)
T ss_pred EEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEE
Confidence 3567789999999999986321 1256689999987653222 35689999999999 899999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||+++|+|.+++.......+++.+++.++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||+++......
T Consensus 118 ~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~ 196 (302)
T cd05055 118 TEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN 196 (302)
T ss_pred EEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCCc
Confidence 99999999999997544445899999999999999999999999 9999999999999999999999999987654322
Q ss_pred -----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 228 -----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
...++..|+|||.+.+..++.++|||||||++|||++ |..||....... .+...+
T Consensus 197 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-------------------~~~~~~ 257 (302)
T cd05055 197 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-------------------KFYKLI 257 (302)
T ss_pred eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-------------------HHHHHH
Confidence 1234678999999998889999999999999999998 888876432110 001111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
........+...+..+.+|+.+||+.+|++|||+.++++.|..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 258 KEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11111112223456789999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=326.04 Aligned_cols=251 Identities=21% Similarity=0.312 Sum_probs=201.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCC--CCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||.||+|...... ..++.||+|.+..... .....+.+|+.+++.++||||+++++++......++|
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v 87 (277)
T cd05032 8 ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVV 87 (277)
T ss_pred eeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEE
Confidence 446788999999999999987522 2457899999875432 2234688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcC--------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCc
Q 009750 149 AEYMPNDTLAKHLFHWE--------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
|||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~~ 166 (277)
T cd05032 88 MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGMT 166 (277)
T ss_pred EecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCcccc
Confidence 99999999999996422 234788999999999999999999999 999999999999999999999999998
Q ss_pred cccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHh
Q 009750 221 KNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 221 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
+..... ....++..|+|||.+.+..++.++|||||||++|||+| |..||...+... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----------~~~--- 232 (277)
T cd05032 167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-----------VLK--- 232 (277)
T ss_pred hhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-----------HHH---
Confidence 754332 22345678999999988889999999999999999998 888875432110 011
Q ss_pred cCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+........+...+..+.+++.+||+.+|.+|||+.++++.|+
T Consensus 233 ------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 233 ------FVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11111111233344677899999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=327.49 Aligned_cols=250 Identities=18% Similarity=0.265 Sum_probs=206.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+.++..||.|+||.||+|.+.. +++.||||.+........+.+.+|+.+++.++||||+++++++.....+++||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVA---TGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcC---CCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 446678889999999999999877 78899999997665555678999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++++|..++. ...+++..++.++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 96 e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 171 (296)
T cd06655 96 EYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK 171 (296)
T ss_pred EecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhccccccc
Confidence 9999999999985 346899999999999999999999999 999999999999999999999999998764433
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.... ....... ...
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-----------~~~~~~~-------~~~ 233 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----------LYLIATN-------GTP 233 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----------HHHHHhc-------CCc
Confidence 234578899999999888899999999999999999999999865432110 0000000 000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...+..+.++|.+||..||.+|||+.+++.+=+.
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~ 272 (296)
T cd06655 234 ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 272 (296)
T ss_pred ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence 111233445678899999999999999999999987543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=321.29 Aligned_cols=246 Identities=26% Similarity=0.368 Sum_probs=202.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
..+...||.|+||.||+|.. .++.||||.++.... ..+++.+|+.+++.++|+||+++++++......++||||
T Consensus 8 ~~~~~~ig~g~~g~v~~~~~-----~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 8 LKLGATIGKGEFGDVMLGDY-----RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred ccceeeeecCCCceEEEEEe-----cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 34667889999999999987 457799999976643 457899999999999999999999999988999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc-cc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS-YS 230 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~ 230 (527)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++....... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~ 160 (256)
T cd05039 82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK 160 (256)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCC
Confidence 99999999997544457999999999999999999999999 99999999999999999999999999987643322 23
Q ss_pred cCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCC
Q 009750 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309 (527)
Q Consensus 231 ~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (527)
.+..|+|||++.+..++.++||||||+++|||++ |..||....... ..... ........
T Consensus 161 ~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----------~~~~~---------~~~~~~~~ 220 (256)
T cd05039 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----------VVPHV---------EKGYRMEA 220 (256)
T ss_pred CcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-----------HHHHH---------hcCCCCCC
Confidence 3567999999988889999999999999999997 888875432110 00111 11111122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 310 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 310 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
+...+..+.+++.+||..+|++|||+.++++.|+.
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 221 PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 33345778999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=325.86 Aligned_cols=250 Identities=17% Similarity=0.199 Sum_probs=202.4
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.+++.||.|+||.||+|.+.. ++..+++|.+........+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus 8 ~i~~~lg~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 8 EIIGELGDGAFGKVYKAQNKE---TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHhhcccCCCeEEEEEEECC---CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 467889999999999999987 78889999987654444567899999999999999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Cc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~ 228 (527)
++++|..++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++...... ..
T Consensus 85 ~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (282)
T cd06643 85 AGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 162 (282)
T ss_pred CCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence 99999988753 3457899999999999999999999999 999999999999999999999999998654332 23
Q ss_pred cccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 229 YSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 229 ~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
..++..|+|||++. +..++.++|||||||++|||++|++||...+.... ...... ..
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~----------~~~~~~-~~------- 224 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV----------LLKIAK-SE------- 224 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH----------HHHHhh-cC-------
Confidence 46788999999984 34578899999999999999999999854321100 000000 00
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
......+...+..+.+|+.+||+.||.+||++.+++++-...
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 266 (282)
T cd06643 225 PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVT 266 (282)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEe
Confidence 000112233456789999999999999999999999886643
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=325.12 Aligned_cols=250 Identities=20% Similarity=0.318 Sum_probs=199.7
Q ss_pred cccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+++.||+|+||.||+|.+... ...+..||+|.+...... ....|.+|+.+++.++|+||+++++++.+....++||
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 88 (277)
T cd05036 9 TLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILL 88 (277)
T ss_pred EeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEE
Confidence 3677889999999999998641 114577999988754322 2356999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCC-----CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC---CceeecccCcc
Q 009750 150 EYMPNDTLAKHLFHWEN-----QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGLMK 221 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~---~~kl~DFG~a~ 221 (527)
||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+|||++.++ .+||+|||+++
T Consensus 89 e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~ 167 (277)
T cd05036 89 ELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMAR 167 (277)
T ss_pred ecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCcccc
Confidence 99999999999965321 25899999999999999999999999 99999999999998765 59999999988
Q ss_pred ccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 222 NSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 222 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
...... ....+..|+|||++.+..++.++|||||||++|||++ |..||...+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~------------------ 229 (277)
T cd05036 168 DIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE------------------ 229 (277)
T ss_pred ccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH------------------
Confidence 653221 1223467999999998899999999999999999997 888886532110
Q ss_pred CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
....+........+...+..+.+++.+||+.+|++|||+.+++++|.
T Consensus 230 --~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 230 --VMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred --HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 11111111122234445677899999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-41 Score=323.69 Aligned_cols=250 Identities=22% Similarity=0.319 Sum_probs=196.2
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeC------Cee
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG------DER 145 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~ 145 (527)
+...||+|+||.||+|.+.... ....||||.++.... ...+.+.+|+.+++.++||||+++++++... ...
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDD-SILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred cccccCcccCceEEEeEEccCC-CeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4567899999999999987622 123699999876532 2245789999999999999999999987542 246
Q ss_pred eEEEEecCCCCHhHHhhhc----CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 146 LLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
++||||+++|+|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCccc
Confidence 8999999999999987431 2345899999999999999999999998 9999999999999999999999999988
Q ss_pred ccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 222 NSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 222 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
...... ...+++.|++||++.+..++.++|||||||++|||++ |+.||.+.+... .......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----------~~~~~~~ 229 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE-----------IYDYLRQ 229 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-----------HHHHHHc
Confidence 654322 2234678999999998889999999999999999999 788876532110 0111111
Q ss_pred CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
. .....+...+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 230 ~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 G---------NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred C---------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1 11112334456689999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-41 Score=320.27 Aligned_cols=246 Identities=21% Similarity=0.269 Sum_probs=199.6
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
.||+|++|.||+|.+.........||||.+..... ...+.+.+|+.++++++||||+++++++.. ...++||||++++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 46999999999999865432345799999987765 345689999999999999999999999988 8899999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-------c
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-------S 228 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-------~ 228 (527)
+|.+++.......+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++....... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 9999997543357899999999999999999999999 9999999999999999999999999987654321 2
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
..++..|+|||++.+..++.++|||||||++|||++ |..||....... ...... ......
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----------~~~~~~--------~~~~~~ 220 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-----------ILKKID--------KEGERL 220 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-----------HHHHHH--------hcCCcC
Confidence 345678999999998889999999999999999999 999875321110 000000 001111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..+...+..+.+++.+||..+|++|||+.++++.|.
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 122334567899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=326.36 Aligned_cols=265 Identities=21% Similarity=0.282 Sum_probs=201.9
Q ss_pred cccccCCCCCCCeEEEEEecCC-CCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDG-NDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~-~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 148 (527)
.+++.||+|+||+||++..... ..+++.||+|.++.... ...+.+.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 3677899999999988764321 12678899999876532 2346789999999999999999999998654 458999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||+++++|.+++.. ..+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++.......
T Consensus 87 ~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 999999999999953 45999999999999999999999999 9999999999999999999999999987654322
Q ss_pred ------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
...++..|+|||++.+..++.++|||||||++|||+||..|+.............. .............
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 237 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPK-----QGQMTVVRLIELL 237 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccc-----ccccchhhhhhhh
Confidence 12345679999999888899999999999999999999988754321110000000 0000001111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
........+...+..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 112222234445678999999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=327.20 Aligned_cols=254 Identities=20% Similarity=0.276 Sum_probs=202.6
Q ss_pred cccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+...||+|+||.||+|..... ......+++|.+...... ..+++.+|+.+++.++||||+++++.+...+..++||
T Consensus 3 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (290)
T cd05045 3 VLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIV 82 (290)
T ss_pred cccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEE
Confidence 3567789999999999987531 113367999988754322 2457899999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcC----------------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC
Q 009750 150 EYMPNDTLAKHLFHWE----------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~ 207 (527)
||+.+|+|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill~ 161 (290)
T cd05045 83 EYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLVA 161 (290)
T ss_pred EecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEEc
Confidence 9999999999986421 135789999999999999999999999 99999999999999
Q ss_pred CCCCceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccc
Q 009750 208 ENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTV 280 (527)
Q Consensus 208 ~~~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~ 280 (527)
+++.+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||+| |..||.+.....
T Consensus 162 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---- 237 (290)
T cd05045 162 EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER---- 237 (290)
T ss_pred CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH----
Confidence 99999999999987543221 2234678999999988889999999999999999999 888886532110
Q ss_pred cccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 281 PIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.+. .+........+...+..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 238 -------~~~---------~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 238 -------LFN---------LLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -------HHH---------HHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 111 111111222334455678999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=320.36 Aligned_cols=246 Identities=28% Similarity=0.421 Sum_probs=203.9
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
.||.|+||.||+|........+..|+||.+....... .+.+.+|++++..++|+||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 5799999999999998621237889999998765433 568999999999999999999999999999999999999999
Q ss_pred CHhHHhhhcC-------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 156 TLAKHLFHWE-------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 156 ~L~~~l~~~~-------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
+|.+++.... ...+++..++.++.||+.||.|||+++ ++|+||||+||+++.++.+||+|||.+......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 9999997531 367999999999999999999999999 999999999999999999999999999876542
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
....++..|+|||.+.+..++.++|||||||++|||++ |..||...+... ......
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----------~~~~~~-------- 221 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE-----------VLEYLR-------- 221 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH-----------HHHHHH--------
Confidence 23456788999999988889999999999999999999 588886542110 111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.......+...+..+.+++.+||..||.+|||+.+++++|+
T Consensus 222 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 222 -KGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -cCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11122234445678999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=336.58 Aligned_cols=261 Identities=17% Similarity=0.164 Sum_probs=201.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.++..||.|+||.||+|...+.. .++.||||.+... +.+.+|+++|++++|||||++++++......++|||+
T Consensus 94 y~i~~~Lg~G~~g~Vy~~~~~~~~-~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 94 YNILSSLTPGSEGEVFVCTKHGDE-QRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred eEEEEeecCCCCeEEEEEEEcCCc-cceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 567889999999999999875422 5688999988643 3467899999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----- 226 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----- 226 (527)
+. ++|.+++. ....+++..++.|+.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++.....
T Consensus 168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 96 58988884 4567999999999999999999999999 999999999999999999999999998764432
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC----------
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK---------- 295 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 295 (527)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+........ .. ..........
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~-~l---~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSS-QL---RSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHH-HH---HHHHHHhccCccccCCccch
Confidence 23468999999999999999999999999999999999999997654321000 00 0000000000
Q ss_pred cchh---hcccccCCCCC-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 296 NILH---LMDSHLEGNFS-------SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 296 ~~~~---~~~~~~~~~~~-------~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.+.. .+....+..+. ...+..+.++|.+||..||++|||+.+++.|-....
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~ 380 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380 (392)
T ss_pred hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence 0000 00000111111 112456789999999999999999999999866544
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=325.80 Aligned_cols=251 Identities=20% Similarity=0.238 Sum_probs=199.6
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
.+++.||+|+||.||+|.+.. +++.||||++...... ....+.+|++++.+++||||+++++++...+..++||||
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 4 QYQEILGHGNGGTVYKAYHLL---TRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred hheeeeccCCCeEEEEEEEcC---CCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 467788999999999999887 7889999998754322 235689999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--Ccc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KSY 229 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~ 229 (527)
+++++|..+. .+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++...... ...
T Consensus 81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 153 (279)
T cd06619 81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTY 153 (279)
T ss_pred CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCC
Confidence 9999996543 4788899999999999999999999 999999999999999999999999998765432 345
Q ss_pred ccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCC
Q 009750 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (527)
.+|..|+|||++.+..++.++|||||||++|+|++|+.||............ ...... +.........
T Consensus 154 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~----~~~~~~--------~~~~~~~~~~ 221 (279)
T cd06619 154 VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP----LQLLQC--------IVDEDPPVLP 221 (279)
T ss_pred CCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccch----HHHHHH--------HhccCCCCCC
Confidence 7889999999999888999999999999999999999998643211100000 000000 0000000001
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 310 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 310 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
....+..+.+++.+||+.||.+||++++++++.+..
T Consensus 222 ~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~ 257 (279)
T cd06619 222 VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIV 257 (279)
T ss_pred CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence 122345688999999999999999999999986543
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=325.04 Aligned_cols=244 Identities=18% Similarity=0.235 Sum_probs=196.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeC------Ceee
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDG------DERL 146 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~------~~~~ 146 (527)
++..||.|+||.||+|.... +++.||||++.... .....+.+|+.++.++ +|+||+++++++... ..++
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~---~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 10 LVELVGNGTYGQVYKGRHVK---TGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred HHHheeecCCeEEEEEEEcC---CCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence 45677999999999999987 78899999987543 3346789999999999 799999999998753 4589
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++++|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 86 iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~ 164 (272)
T cd06637 86 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 164 (272)
T ss_pred EEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccc
Confidence 9999999999999997644567899999999999999999999999 999999999999999999999999998764332
Q ss_pred ----CccccCCccCCcccccC-----CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 227 ----KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
....+++.|+|||++.+ ..++.++|||||||++|||++|+.||...+... ......
T Consensus 165 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~-----------~~~~~~---- 229 (272)
T cd06637 165 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----------ALFLIP---- 229 (272)
T ss_pred cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH-----------HHHHHh----
Confidence 34567889999999863 357889999999999999999999985322110 000000
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
........+...+..+.+|+.+||..||.+|||+.++++|
T Consensus 230 ----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 230 ----RNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred ----cCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 0001111122344578899999999999999999999886
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=326.84 Aligned_cols=248 Identities=19% Similarity=0.220 Sum_probs=201.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+.||.|+||+||++.+.. +++.||+|.+...... ....+.+|+++|++++|+||+.+.+++..++..++|||
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRA---TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred EEEEEecCCCeEEEEEEECC---CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 45667999999999999987 7889999998754322 23457889999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---C
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---K 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---~ 227 (527)
|+++++|..++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++...... .
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIR 159 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCccc
Confidence 999999999887544557999999999999999999999999 999999999999999999999999998764432 2
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...++..|+|||++.+..++.++|+|||||++|||++|..||........ .... ...+.. ...
T Consensus 160 ~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-----------~~~~-----~~~~~~-~~~ 222 (285)
T cd05632 160 GRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-----------REEV-----DRRVLE-TEE 222 (285)
T ss_pred CCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-----------HHHH-----HHhhhc-ccc
Confidence 34678999999999988899999999999999999999999865321100 0000 000000 011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHh
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTL 342 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L 342 (527)
.++...+..+.+|+.+||+.||++||+ +.+++.+-
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~ 262 (285)
T cd05632 223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHP 262 (285)
T ss_pred ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcCh
Confidence 223344566889999999999999999 67777763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=322.27 Aligned_cols=248 Identities=24% Similarity=0.300 Sum_probs=196.0
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
.||+|+||.||+|.+.++. ....+++|.++.... ...+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred cCCCCCCceEEEEEEcCCC-CeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 4699999999999997621 123578998875432 2345789999999999 899999999999999999999999999
Q ss_pred CCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCc
Q 009750 155 DTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 155 g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||++
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCc
Confidence 99999996422 135789999999999999999999998 999999999999999999999999998
Q ss_pred cccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 221 KNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 221 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
...... .....+..|+|||++.+..++.++|||||||++|||++ |..||...+... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-----------~~~~~---- 224 (270)
T cd05047 160 RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----------LYEKL---- 224 (270)
T ss_pred cccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH-----------HHHHH----
Confidence 643221 11223567999999988889999999999999999997 888885432110 00101
Q ss_pred chhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
........+...+..+.+|+.+||..||.+|||+.+++..|..+.
T Consensus 225 -----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 225 -----PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -----hCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 111111122334567889999999999999999999999997653
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=332.37 Aligned_cols=267 Identities=15% Similarity=0.165 Sum_probs=198.5
Q ss_pred ccccCCCC--CCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 74 IVSESGEK--APNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 74 ~~~~lg~G--~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+++.||+| +|++||++..+. +|+.||||++....... .+.+.+|+.+++.++||||++++++|..++..++||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 78 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKP---TGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 78 (327)
T ss_pred hhhhccccccceEEEEEEeecc---cCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEE
Confidence 45677888 788999999987 88999999997654322 346788999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.++++||+........
T Consensus 79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 9999999999997544556899999999999999999999999 999999999999999999999999865432111
Q ss_pred --------CccccCCccCCcccccC--CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccc------cccccchhh--H
Q 009750 227 --------KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWN------TVPIKFNFG--A 288 (527)
Q Consensus 227 --------~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~------~~~~~~~~~--~ 288 (527)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ..+...... .
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 12245677999999976 45899999999999999999999998643211000 000000000 0
Q ss_pred HHHHhc--------Ccchh---------hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 289 LDMIRG--------KNILH---------LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 289 ~~~~~~--------~~~~~---------~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...... ..... ..............++.+.+|+.+||+.||++|||+.++++|-..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f 310 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 310 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhh
Confidence 000000 00000 000000011222345678999999999999999999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-41 Score=358.70 Aligned_cols=251 Identities=17% Similarity=0.215 Sum_probs=198.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeC--Ce
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG--DE 144 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~ 144 (527)
+..+.+++.||.|+||+||+|.+.. +++.||+|++...... ....|..|+.+|..|+|||||+++++|... ..
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~---tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKR---TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECC---CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 3456688999999999999999987 7889999998755332 245789999999999999999999998653 56
Q ss_pred eeEEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCC------CccccccCCCceEeCC--------
Q 009750 145 RLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEG------RPLYHDLNAYRVLFDE-------- 208 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~------~ivH~Dlkp~NIll~~-------- 208 (527)
+||||||+++|+|.++|... ....+++..++.|+.||+.||.|||+.+ .||||||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999999999642 2357999999999999999999999842 2999999999999964
Q ss_pred ---------CCCceeecccCccccCCC---CccccCCccCCcccccC--CcCCCCcccchhhHHHHHHHhCCCCCCCCCc
Q 009750 209 ---------NGDPRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHDM 274 (527)
Q Consensus 209 ---------~~~~kl~DFG~a~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~p~~~~~~ 274 (527)
.+.+||+|||++...... ....+|+.|+|||++.+ ..++.++||||||||||||+||+.||...+.
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 335899999999765432 34568999999999865 4488999999999999999999999864321
Q ss_pred cccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 275 VVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
... ....+ ...... .....+..+.+||..||..+|.+||++.++|.+-
T Consensus 249 ~~q----------li~~l---------k~~p~l-pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~ 296 (1021)
T PTZ00266 249 FSQ----------LISEL---------KRGPDL-PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQ 296 (1021)
T ss_pred HHH----------HHHHH---------hcCCCC-CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccH
Confidence 110 00111 000000 0112356788999999999999999999999763
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=323.68 Aligned_cols=254 Identities=17% Similarity=0.229 Sum_probs=202.9
Q ss_pred HHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeC
Q 009750 63 RAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142 (527)
Q Consensus 63 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 142 (527)
+..+++++... .||+|+||.||+|.+.. ++..||+|.+........+.+.+|+.+++.++|+||+++++++..+
T Consensus 4 ~~~~~~~~~~~---~lg~g~~g~v~~~~~~~---~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 77 (268)
T cd06624 4 EYEYDENGERV---VLGKGTYGIVYAARDLS---TQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN 77 (268)
T ss_pred ccccccCCceE---EEecCCceEEEEeEecC---CCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC
Confidence 34566666544 45999999999999877 7788999998776554566899999999999999999999999999
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCc--CHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-CCCceeecccC
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTI--EWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGL 219 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l--~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~ 219 (527)
+..++||||+++++|.+++... ...+ ++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~ 155 (268)
T cd06624 78 GFFKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGT 155 (268)
T ss_pred CEEEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchh
Confidence 9999999999999999999742 2344 78889999999999999999999 999999999999976 67999999999
Q ss_pred ccccCCC----CccccCCccCCcccccCCc--CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 220 MKNSRDG----KSYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 220 a~~~~~~----~~~~~t~~y~aPE~~~~~~--~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
+...... ....+++.|+|||++.+.. ++.++|||||||++|+|++|+.||...+.... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~------------~--- 220 (268)
T cd06624 156 SKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA------------A--- 220 (268)
T ss_pred heecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh------------h---
Confidence 8754322 2345788999999987654 78899999999999999999999854211000 0
Q ss_pred cCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
............++...+..+.+++.+||+.+|.+|||+.+++.|-
T Consensus 221 ---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 266 (268)
T cd06624 221 ---MFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDP 266 (268)
T ss_pred ---HhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCC
Confidence 0000000111223445567789999999999999999999999873
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=319.71 Aligned_cols=253 Identities=18% Similarity=0.227 Sum_probs=206.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+.+.||.|+||.||+|.... +++.||+|.++..... ..+.+.+|++++++++|+||+++++++...+..++|
T Consensus 4 y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 4 FKIEKKIGKGQFSVVYKAICLL---DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred eeeeeeeccCCceEEEEEEEcC---CCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 3466778999999999999986 7889999998743322 245799999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 149 AEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
|||+++++|..++... ....+++..++.++.+|+.||.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 159 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence 9999999999998642 2456899999999999999999999999 999999999999999999999999998754432
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||........ . ....+.
T Consensus 160 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------------~------~~~~~~ 221 (267)
T cd08224 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY------------S------LCKKIE 221 (267)
T ss_pred CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH------------H------HHhhhh
Confidence 234578889999999888899999999999999999999999854321100 0 000000
Q ss_pred cccCCCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 303 SHLEGNFSS-EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 303 ~~~~~~~~~-~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.......+. ..+..+.+++.+||..+|.+|||+.++++.|+.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 222 KCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred cCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 111112222 45567899999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=346.43 Aligned_cols=267 Identities=17% Similarity=0.172 Sum_probs=194.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCC------CccceeEEEEEeC-Ce
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH------KRLANLIGYCCDG-DE 144 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H------~nIv~l~~~~~~~-~~ 144 (527)
+.+++.||+|+||+||+|.+.. +++.||||+++.... ....+..|+.++..++| ++|+++++++... .+
T Consensus 131 y~i~~~lG~G~fg~V~~a~~~~---~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 131 FKILSLLGEGTFGKVVEAWDRK---RKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred EEEEEEEEeccCEEEEEEEEcC---CCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 4577889999999999999987 788999999965321 23456667777777754 4588999988764 57
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEeCCCC-------------
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENG------------- 210 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll~~~~------------- 210 (527)
++||||++ +++|.+++. ..+.+++..+..|+.||+.||.|||+ .+ ||||||||+|||++.++
T Consensus 207 ~~iv~~~~-g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred EEEEEecc-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCC
Confidence 89999998 678999886 34679999999999999999999998 48 99999999999998765
Q ss_pred ---CceeecccCccccCC-CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----
Q 009750 211 ---DPRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI---- 282 (527)
Q Consensus 211 ---~~kl~DFG~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~---- 282 (527)
.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.........
T Consensus 283 ~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g 362 (467)
T PTZ00284 283 DPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLG 362 (467)
T ss_pred CCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Confidence 499999998865433 345678999999999999999999999999999999999999997654321100000
Q ss_pred cchhhHHHHHhcCcchhhcccc--cCCC--------------C-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 283 KFNFGALDMIRGKNILHLMDSH--LEGN--------------F-SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~--~~~~--------------~-~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.++..............++... +... . .......+.+||.+||+.||.+|||+.++|+|-+..
T Consensus 363 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~ 442 (467)
T PTZ00284 363 RLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVL 442 (467)
T ss_pred CCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccc
Confidence 0000000000000000000000 0000 0 011235678999999999999999999999987654
Q ss_pred c
Q 009750 346 Q 346 (527)
Q Consensus 346 ~ 346 (527)
.
T Consensus 443 ~ 443 (467)
T PTZ00284 443 K 443 (467)
T ss_pred c
Confidence 3
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=330.25 Aligned_cols=194 Identities=19% Similarity=0.248 Sum_probs=161.8
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEe--CCeeeEEEEec
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLLVAEYM 152 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~E~~ 152 (527)
..+||+|+||+||+|..+.+. +++.||||.+.... ....+.+|+.+|++++||||+++++++.. ....++||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~-~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGK-DDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCC-CCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 347899999999999976432 56889999987543 23568899999999999999999999864 45689999999
Q ss_pred CCCCHhHHhhhc-------CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe----CCCCCceeecccCcc
Q 009750 153 PNDTLAKHLFHW-------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----DENGDPRLSCFGLMK 221 (527)
Q Consensus 153 ~~g~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll----~~~~~~kl~DFG~a~ 221 (527)
.+ +|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 83 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 65 888887532 1235899999999999999999999999 9999999999999 456789999999997
Q ss_pred ccCCC-------CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCC
Q 009750 222 NSRDG-------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHD 273 (527)
Q Consensus 222 ~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~ 273 (527)
..... ....+|+.|+|||++.+. .++.++||||+||++|||++|++||....
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 65432 235678999999999774 58999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=334.18 Aligned_cols=252 Identities=20% Similarity=0.171 Sum_probs=198.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||++.... +++.||||++.+.. ....+.+.+|+.++..++|+||+++++++.+++.+++|
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 3 FEILKVIGRGAFGEVAVVKMKN---TGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred ceEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence 4577889999999999999987 78899999987532 12245688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||+++|+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 80 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 80 MDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred EecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 999999999999964 3457899999999999999999999999 9999999999999999999999999987644322
Q ss_pred ----ccccCCccCCcccccC-----CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 228 ----SYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 228 ----~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||...+.... ...........
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~----------~~~i~~~~~~~ 227 (331)
T cd05597 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET----------YGKIMNHKEHF 227 (331)
T ss_pred ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH----------HHHHHcCCCcc
Confidence 2358999999999863 4578899999999999999999999865321100 00000000000
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCC--CCCCHHHHHHHhcc
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPR--ERPNTKDLVSTLAP 344 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~--~Rpt~~~vl~~L~~ 344 (527)
. + .......+..+.+|+.+||..++. .|+++.+++.|-+.
T Consensus 228 ~-----~-~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~ 269 (331)
T cd05597 228 Q-----F-PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFF 269 (331)
T ss_pred c-----C-CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCC
Confidence 0 0 011122456788999998865443 47899999999653
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=329.88 Aligned_cols=256 Identities=21% Similarity=0.296 Sum_probs=203.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCC----CCceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGN----DNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
.+.+.+.||+|+||.||++...... .+...+|+|.++.... ....++.+|+.++.++ +||||+++++++.....
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 98 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 3457789999999999999864311 1345799999986532 2345688999999999 79999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCC--------------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWEN--------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
.++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+.+ ++||||||+|||++.++
T Consensus 99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~ 177 (307)
T cd05098 99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDN 177 (307)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCC
Confidence 9999999999999999975321 34889999999999999999999998 99999999999999999
Q ss_pred CceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCcccccccccc
Q 009750 211 DPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 283 (527)
.+||+|||++....... ...+++.|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~------- 250 (307)
T cd05098 178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 250 (307)
T ss_pred cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-------
Confidence 99999999987654321 1123467999999988889999999999999999998 777775432110
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+...+........+...+..+.+|+.+||..+|.+|||+.++++.|..+..
T Consensus 251 -------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 251 -------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred -------------HHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 011111111222344456788999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=340.52 Aligned_cols=264 Identities=19% Similarity=0.187 Sum_probs=199.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCC-----eee
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD-----ERL 146 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~ 146 (527)
+++.||+|+||.||++.+.. +++.||||++..... ...+++.+|+++++.++||||+++++++.... ..+
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 4 PDRPIGYGAFGVVWSVTDPR---DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred ccceeeeCCCEEEEEEEECC---CCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 66788999999999999876 788999999875422 23457899999999999999999999998776 789
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999996 48888886 4567999999999999999999999999 999999999999999999999999998764322
Q ss_pred -----CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHHHhcCc
Q 009750 227 -----KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDMIRGKN 296 (527)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 296 (527)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+......... ..............
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 233568899999999875 47899999999999999999999997654221000000 00000000000000
Q ss_pred chhhcccccCC-------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 ILHLMDSHLEG-------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+....... ......+..+.+||.+||+.||.+|||+.+++.|-+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 291 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYL 291 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhh
Confidence 00000000000 1112235678899999999999999999999998653
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=338.57 Aligned_cols=266 Identities=17% Similarity=0.187 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCC----
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---- 143 (527)
..+.+++.||+|+||.||++.+.. +++.||||++..... .....+.+|+.+++.++||||+++++++....
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTV---LGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcC---CCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 345578889999999999999987 788999999975432 23457889999999999999999999986543
Q ss_pred --eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 144 --ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 144 --~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
..++||||+++ +|...+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 47999999976 6776664 24888999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccc-------cccc-chhh---
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNT-------VPIK-FNFG--- 287 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~-------~~~~-~~~~--- 287 (527)
..... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...... .+.. ....
T Consensus 172 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
T cd07876 172 TACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP 251 (359)
T ss_pred ccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 64332 34567899999999999999999999999999999999999997654221000 0000 0000
Q ss_pred -HHHHHhc-C-----cchhhccccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 288 -ALDMIRG-K-----NILHLMDSHL---EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 288 -~~~~~~~-~-----~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....... . .......... ........+..+.+|+.+||+.||++|||+.+++.|-+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 318 (359)
T cd07876 252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318 (359)
T ss_pred HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence 0000000 0 0000000000 000111234668899999999999999999999998653
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=337.95 Aligned_cols=239 Identities=19% Similarity=0.201 Sum_probs=191.4
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcC---CCCccceeEEEEEeCCeeeEEEEe
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKL---RHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
||+|+||+||+|.+.. +++.||||++.+.... ....+..|..++..+ +||||+++++++.....+++||||
T Consensus 1 lG~G~~g~Vy~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKD---TRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECC---CCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcC
Confidence 6999999999999987 7889999998754321 223456677777665 699999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CC
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GK 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~ 227 (527)
+++|+|..++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... ..
T Consensus 78 ~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 78 MSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred CCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 99999999987 4567999999999999999999999999 99999999999999999999999999875322 23
Q ss_pred ccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 228 SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
...||+.|+|||++.+. .++.++|||||||++|||+||+.||...+... .... +.....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~-----------~~~~--------i~~~~~- 214 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ-----------MYRN--------IAFGKV- 214 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH-----------HHHH--------HHcCCC-
Confidence 45689999999999765 47999999999999999999999986542110 0000 100000
Q ss_pred CCCC-HHHHHHHHHHHHHhcccCCCCCC----CHHHHHHHhc
Q 009750 307 GNFS-SEEATVVFDLASRCLQYEPRERP----NTKDLVSTLA 343 (527)
Q Consensus 307 ~~~~-~~~~~~~~~li~~cl~~dp~~Rp----t~~~vl~~L~ 343 (527)
.++ ...+..+.+|+.+||+.||.+|| ++.++++|-+
T Consensus 215 -~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~ 255 (330)
T cd05586 215 -RFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPF 255 (330)
T ss_pred -CCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCcc
Confidence 111 12356688999999999999998 5777777654
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=322.52 Aligned_cols=248 Identities=17% Similarity=0.214 Sum_probs=200.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.++..||+|+||.||+|.+.. +++.||+|+++.........+.+|+.+++.++||||+++++.+...+..++||||
T Consensus 11 ~~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 11 FELIQRIGSGTYGDVYKARNVN---TGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHhCCCCCeEEEEEEEcC---CCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 4467788999999999999987 7889999998766544456788999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----C
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----K 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~ 227 (527)
+++++|.+++. ..+.+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 88 ~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06645 88 CGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRK 164 (267)
T ss_pred cCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccc
Confidence 99999999986 4457999999999999999999999999 999999999999999999999999998654322 3
Q ss_pred ccccCCccCCccccc---CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 SYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...++..|+|||++. ...++.++|||||||++|+|++|..||........ ........ .....
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-----------~~~~~~~~---~~~~~ 230 (267)
T cd06645 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-----------LFLMTKSN---FQPPK 230 (267)
T ss_pred cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-----------HHhhhccC---CCCCc
Confidence 446889999999974 45688999999999999999999998754321100 00000000 00000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
... ....+..+.+++.+||..+|++|||+.++++|
T Consensus 231 ~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 231 LKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred ccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 000 11234568899999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=330.02 Aligned_cols=255 Identities=20% Similarity=0.290 Sum_probs=202.8
Q ss_pred ccccccCCCCCCCeEEEEEecC----CCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQD----GNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~----~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 145 (527)
+.+...||+|+||.||+|.... ....+..||+|.+..... .....+.+|+.+++.+ +||||+++++++......
T Consensus 17 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (304)
T cd05101 17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 96 (304)
T ss_pred eeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCce
Confidence 3467788999999999997532 222456799999875432 2345799999999999 899999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~ 211 (527)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~~ 175 (304)
T cd05101 97 YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENNV 175 (304)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCCc
Confidence 99999999999999997532 135788899999999999999999999 999999999999999999
Q ss_pred ceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccc
Q 009750 212 PRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKF 284 (527)
Q Consensus 212 ~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 284 (527)
+||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||...+...
T Consensus 176 ~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------- 247 (304)
T cd05101 176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-------- 247 (304)
T ss_pred EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--------
Confidence 9999999997654321 1234567999999988889999999999999999998 777775432110
Q ss_pred hhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 285 NFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..... ........+...+..+.+|+.+||+.+|.+|||+.++++.|..+..
T Consensus 248 ---~~~~~---------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 248 ---LFKLL---------KEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred ---HHHHH---------HcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 01111 1111112233456778999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=327.80 Aligned_cols=268 Identities=20% Similarity=0.231 Sum_probs=204.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.++..||.|+||.||++.+.. ++..+|+|.+...... ...++.+|++++++++||||+++++++..++.+++|||
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRP---SGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcC---CCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 3467788999999999999887 7888999998754322 23568899999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCCCceeecccCccccCC--CC
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--GK 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--~~ 227 (527)
|+++++|.+++. ....+++..+..++.||++||.|||+. + ++||||||+|||++.++.+||+|||++..... ..
T Consensus 80 y~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 156 (308)
T cd06615 80 HMDGGSLDQVLK--KAGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 156 (308)
T ss_pred ccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccc
Confidence 999999999997 346789999999999999999999984 6 99999999999999999999999999876433 23
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc-cccchhhHH------------HHHhc
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV-PIKFNFGAL------------DMIRG 294 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~-~~~~~~~~~------------~~~~~ 294 (527)
...+++.|+|||++.+..++.++|||||||++|+|++|+.||...+....... ......... .....
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (308)
T cd06615 157 SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRP 236 (308)
T ss_pred cCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccch
Confidence 45678999999999888899999999999999999999999865432110000 000000000 00000
Q ss_pred Ccchhhcccc---cCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 295 KNILHLMDSH---LEGNFS-SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 295 ~~~~~~~~~~---~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.....+.+.. .....+ ...+..+.+|+.+||..||++|||+.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~ 291 (308)
T cd06615 237 MAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK 291 (308)
T ss_pred hhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence 0000000000 001111 12456789999999999999999999999987653
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=324.90 Aligned_cols=246 Identities=20% Similarity=0.227 Sum_probs=207.7
Q ss_pred cCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCC
Q 009750 67 NNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143 (527)
Q Consensus 67 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 143 (527)
+.|+.++++ |+||||.||-|+.+. +|+.+|.|++.+... .......+|-.||.+++.+.||.+--+|+..+
T Consensus 185 n~F~~~Rvl---GkGGFGEV~acqvra---TGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd 258 (591)
T KOG0986|consen 185 NTFRVYRVL---GKGGFGEVCACQVRA---TGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD 258 (591)
T ss_pred cceeeeEEE---ecccccceeEEEEec---chhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC
Confidence 446666665 999999999999998 999999999876532 23346889999999999999999999999999
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
.++|||..|.||+|.-+|.+.....+++..++.++.+|+.||++||+.+ ||+|||||+|||||+.|+++|+|.|+|...
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccceEEec
Confidence 9999999999999999998767778999999999999999999999999 999999999999999999999999999987
Q ss_pred CCCC---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 224 RDGK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 224 ~~~~---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
.++. ..+||.+|||||++.++.|+...|+|||||+||||+.|+.||..... ......+.+.
T Consensus 338 ~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke----------------Kvk~eEvdrr 401 (591)
T KOG0986|consen 338 PEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE----------------KVKREEVDRR 401 (591)
T ss_pred CCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh----------------hhhHHHHHHH
Confidence 7764 34789999999999999999999999999999999999999964321 1111111111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTK 336 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~ 336 (527)
+. .....++...++++.+|.+.+|.+||++|....
T Consensus 402 ~~-~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 402 TL-EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred Hh-cchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 10 112246677788899999999999999997654
|
|
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-41 Score=322.34 Aligned_cols=250 Identities=22% Similarity=0.294 Sum_probs=200.7
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
....||+|+||.||+|.+.........+|||+++..... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYM 88 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcC
Confidence 456679999999999998763323457999998765322 2457899999999999999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc----
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS---- 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---- 228 (527)
++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 89 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 166 (268)
T cd05063 89 ENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYT 166 (268)
T ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceeccccccccee
Confidence 99999999964 3457899999999999999999999999 99999999999999999999999999875543211
Q ss_pred ---cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 229 ---YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 229 ---~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...+..|+|||++.+..++.++|||||||++|||++ |+.||...+... ..... ...
T Consensus 167 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-----------~~~~i---------~~~ 226 (268)
T cd05063 167 TSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-----------VMKAI---------NDG 226 (268)
T ss_pred ccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-----------HHHHH---------hcC
Confidence 112356999999988889999999999999999998 999985432110 00111 111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.....+...+..+.+++.+||+.+|.+||++.++++.|..+
T Consensus 227 ~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11122334456789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=329.85 Aligned_cols=257 Identities=20% Similarity=0.289 Sum_probs=203.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCC----CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGN----DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~----~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 145 (527)
+.+++.||+|+||.||+|...... .....||+|.++..... ..+.+.+|+.+++++ +||||++++++|...+..
T Consensus 14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 93 (334)
T cd05100 14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 93 (334)
T ss_pred eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCce
Confidence 457788999999999999864311 12346999988754322 245799999999999 899999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~ 211 (527)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.
T Consensus 94 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~~ 172 (334)
T cd05100 94 YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDNV 172 (334)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCc
Confidence 99999999999999996422 234788999999999999999999999 999999999999999999
Q ss_pred ceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccc
Q 009750 212 PRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKF 284 (527)
Q Consensus 212 ~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 284 (527)
+||+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..||...+...
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-------- 244 (334)
T cd05100 173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-------- 244 (334)
T ss_pred EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--------
Confidence 9999999987654322 1123467999999998899999999999999999998 778876532111
Q ss_pred hhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 285 NFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
... .+........+...+..+.+|+.+||+.+|.+|||+.++++.|+.+....
T Consensus 245 ---~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 245 ---LFK---------LLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred ---HHH---------HHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 001 11111111223344567889999999999999999999999999887533
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=329.28 Aligned_cols=247 Identities=19% Similarity=0.234 Sum_probs=196.0
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
+.+.++++||.||.+.||++... +.+.+|+|++...... ...-|.+|+.+|.+| .|.+||+|++|-..++.+|
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s----~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNS----DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecC----CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 45778999999999999999887 4456888877644322 245799999999999 6999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
|||||-+. +|..+|+........| .++.+..|++.++.++|..| |||.||||.|+|+- .|.+||+|||+|......
T Consensus 437 mvmE~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 437 MVMECGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred EEeecccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCcc
Confidence 99999865 9999997533333334 78889999999999999999 99999999999998 578999999999877655
Q ss_pred C------ccccCCccCCcccccCC-----------cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHH
Q 009750 227 K------SYSTNLAYTPPEYLRNG-----------RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 227 ~------~~~~t~~y~aPE~~~~~-----------~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
+ +.+||+.||+||.+... +.+.++||||||||||+|+.|++||..-
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~----------------- 575 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI----------------- 575 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-----------------
Confidence 3 46899999999988532 2678999999999999999999998421
Q ss_pred HHHhcCcchhhcccccCCCCCHHHH-HHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 290 DMIRGKNILHLMDSHLEGNFSSEEA-TVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
. .....+..|.++...-+|+.--. .++.++++.||..||.+||++.++|+|-
T Consensus 576 ~-n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhp 628 (677)
T KOG0596|consen 576 I-NQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHP 628 (677)
T ss_pred H-HHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence 0 00122333444433333332111 2288999999999999999999999873
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-41 Score=331.36 Aligned_cols=248 Identities=19% Similarity=0.190 Sum_probs=197.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||.||++.... +++.||+|++.+.. ......+.+|+.++..++|+||+++++++.+...+++|
T Consensus 3 y~~~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 3 FEILKVIGRGAFGEVAVVKLKN---ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred ceEEEEEEeCCCeEEEEEEECC---CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence 4477889999999999999987 78889999986432 11234588999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 80 ~ey~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 80 MDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred EeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 999999999999974 2457899999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 227 ---KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...+... ...
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~-----------~~~-------- 218 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-----------TYG-------- 218 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH-----------HHH--------
Confidence 1346899999999986 3458899999999999999999999996543111 000
Q ss_pred hhcccccCCCC---CHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhc
Q 009750 299 HLMDSHLEGNF---SSEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLA 343 (527)
Q Consensus 299 ~~~~~~~~~~~---~~~~~~~~~~li~~cl~~dp~~--Rpt~~~vl~~L~ 343 (527)
.+........+ ....+..+.+|+.+||..++.+ |+++.++++|-+
T Consensus 219 ~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~ 268 (332)
T cd05623 219 KIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPF 268 (332)
T ss_pred HHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCC
Confidence 11111111111 1234677889999998654444 689999999854
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=325.97 Aligned_cols=268 Identities=19% Similarity=0.281 Sum_probs=200.9
Q ss_pred ccccccCCCCCCCeEEEEEecC-CCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 148 (527)
..+++.||+|+||.||+|.... ...+++.||||++........+.+.+|+++++.++||||+++++++... ..+++|
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 85 (284)
T cd05081 6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLV 85 (284)
T ss_pred ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEE
Confidence 4477889999999999998542 1226788999998766544456799999999999999999999987543 468999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 228 (527)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++........
T Consensus 86 ~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 163 (284)
T cd05081 86 MEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE 163 (284)
T ss_pred EEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCCc
Confidence 999999999999964 3356899999999999999999999999 99999999999999999999999999986543321
Q ss_pred -------cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 229 -------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 229 -------~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
..++..|+|||++.+..++.++|||||||++|||++|..++................ .......+...+
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 239 (284)
T cd05081 164 YYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQ----GQMIVYHLIELL 239 (284)
T ss_pred ceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccc----cccchHHHHHHH
Confidence 112345999999988889999999999999999999877643221100000000000 000000001111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
........+...+..+.+|+.+||..+|++|||+.++++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 240 KNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred hcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11111122334456799999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=319.63 Aligned_cols=249 Identities=21% Similarity=0.255 Sum_probs=191.3
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
.||+|+||.||+|....+. ++..+|+|.++..... ....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGY-TPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred cccccCCceEEEEEEcCCC-CceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 5799999999999876422 5677999998765432 2347899999999999999999999999988999999999999
Q ss_pred CHhHHhhhcC---CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-----
Q 009750 156 TLAKHLFHWE---NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK----- 227 (527)
Q Consensus 156 ~L~~~l~~~~---~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~----- 227 (527)
+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++++||+|||++.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 9999996422 234677888899999999999999999 9999999999999999999999999987543321
Q ss_pred -ccccCCccCCcccccCC-------cCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 228 -SYSTNLAYTPPEYLRNG-------RVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~-------~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
...++..|+|||++.+. .++.++|||||||++|||++ |+.||+...... ...........
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-----------~~~~~~~~~~~ 228 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ-----------VLTYTVREQQL 228 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH-----------HHHHHhhcccC
Confidence 23456789999998642 35789999999999999996 998986432110 00000001011
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+.. .......+..+.+++.+|| .+|.+|||+.+|+..|+
T Consensus 229 ~~~~----~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPK----PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCC----CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1111 1111223456788999999 68999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=320.44 Aligned_cols=242 Identities=21% Similarity=0.345 Sum_probs=199.9
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCCh---------HHHHHHHHHhhcCCCCccceeEEEEEeCCe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---------KQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~---------~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 144 (527)
+...||.|+||.||+|.+.. +++.||+|.+........ +.+.+|+.++++++||||+++++++.....
T Consensus 4 ~~~~ig~g~~~~v~~a~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 4 KGALIGSGSFGSVYLGMNAS---SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred ccceeecCCCeEEEEEEecC---CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 44577999999999999876 778899999876543221 468899999999999999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
.++||||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||+++...
T Consensus 81 ~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 81 LNIFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred cEEEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 999999999999999997 3467899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 225 DG----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 225 ~~----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
.. ....++..|+|||.+.+..++.++|||||||++|+|++|+.||...+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------------------ 219 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ------------------ 219 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH------------------
Confidence 21 12346788999999998889999999999999999999999986432100
Q ss_pred CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.+..+.. ......+...+..+.+++.+||+.||.+||++.+++++
T Consensus 220 -~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 220 -AIFKIGE-NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred -HHHHHhc-cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0001101 11223344556778999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=317.01 Aligned_cols=241 Identities=25% Similarity=0.392 Sum_probs=196.0
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
.||.|+||.||+|... +++.||+|+++...... ...+.+|+++++.++||||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~vy~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 2 LLGKGNFGEVFKGTLK----DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred ccCCCCCceEEEEEec----CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 4699999999999865 56779999987654222 346889999999999999999999999999999999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-----ccc
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-----SYS 230 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-----~~~ 230 (527)
+|.+++.. ....+++..++.++.+++.+|.|||+.+ ++||||||+||+++.++.+||+|||++....... ...
T Consensus 78 ~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (250)
T cd05085 78 DFLSFLRK-KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ 155 (250)
T ss_pred cHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCC
Confidence 99999864 3356899999999999999999999999 9999999999999999999999999987543321 123
Q ss_pred cCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCC
Q 009750 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309 (527)
Q Consensus 231 ~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (527)
++..|+|||++.+..++.++|||||||++|+|++ |..||....... ...... .......
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-----------~~~~~~---------~~~~~~~ 215 (250)
T cd05085 156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-----------AREQVE---------KGYRMSC 215 (250)
T ss_pred CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-----------HHHHHH---------cCCCCCC
Confidence 3567999999988889999999999999999999 888886432110 001111 1111122
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 310 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 310 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
+...+..+.+++.+||..+|++||++.++++.|.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 216 PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 3345567899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=320.98 Aligned_cols=252 Identities=23% Similarity=0.281 Sum_probs=201.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+.+.||+|+||.||+|.+......+..+|+|.++..... ..+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (267)
T cd05066 6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTE 85 (267)
T ss_pred eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEE
Confidence 34667889999999999998653324557999998754322 24578999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc--
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS-- 228 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-- 228 (527)
|+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++........
T Consensus 86 ~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd05066 86 YMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163 (267)
T ss_pred cCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCccccccccccee
Confidence 9999999999974 3356899999999999999999999999 99999999999999999999999999876543321
Q ss_pred -----cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 229 -----YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 229 -----~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
...+..|++||++.+..++.++|||||||++||+++ |..||...+... ......
T Consensus 164 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-----------~~~~~~--------- 223 (267)
T cd05066 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-----------VIKAIE--------- 223 (267)
T ss_pred eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-----------HHHHHh---------
Confidence 112457999999998889999999999999999887 998875432110 001010
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.......+...+..+.+++.+||+.+|.+||++.++++.|..+
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 224 EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 1111122333456788999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=333.51 Aligned_cols=265 Identities=16% Similarity=0.181 Sum_probs=199.1
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeC------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG------ 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------ 142 (527)
.+.+++.||+|+||.||++.+.. +++.||||++..... .....+.+|+.+++.++||||+++++++...
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 25 RYQNLKPIGSGAQGIVCAAYDAI---LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred ceeEEEEeecCCCeEEEEEEECC---CCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 45577889999999999999887 788899999976432 2345788999999999999999999987543
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
..+++||||+++ +|...+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 357999999975 7877774 24788999999999999999999999 99999999999999999999999999986
Q ss_pred cCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc---c-hhhHHHHH---
Q 009750 223 SRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK---F-NFGALDMI--- 292 (527)
Q Consensus 223 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~---~-~~~~~~~~--- 292 (527)
.... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......... . ........
T Consensus 176 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (364)
T cd07875 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255 (364)
T ss_pred cCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence 5443 345678999999999999999999999999999999999999976543211000000 0 00000000
Q ss_pred -----hc-C-----cchhhccccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 293 -----RG-K-----NILHLMDSHL---EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 293 -----~~-~-----~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.. . ....+..... ...........+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~ 321 (364)
T cd07875 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321 (364)
T ss_pred HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence 00 0 0000000000 000111124568899999999999999999999998553
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=333.64 Aligned_cols=248 Identities=19% Similarity=0.181 Sum_probs=198.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||+++... +++.||||++.+.. ......+.+|+.++..++|+||+++++++.+.+..|||
T Consensus 3 y~i~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 3 FEIIKVIGRGAFGEVAVVKMKH---TERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred ceEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 4577889999999999999987 78899999987532 12234588999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||++||+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 80 ~Ey~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 80 MDYYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred EeCCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 999999999999974 2457899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ----ccccCCccCCcccccC-----CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 228 ----SYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 228 ----~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
...||+.|+|||++.+ +.++.++|||||||+||||++|+.||...+... . ..
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-----------~--------~~ 218 (331)
T cd05624 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE-----------T--------YG 218 (331)
T ss_pred eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH-----------H--------HH
Confidence 2468999999999875 457889999999999999999999986543110 0 00
Q ss_pred hhcccccCCCCC---HHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhc
Q 009750 299 HLMDSHLEGNFS---SEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLA 343 (527)
Q Consensus 299 ~~~~~~~~~~~~---~~~~~~~~~li~~cl~~dp~~--Rpt~~~vl~~L~ 343 (527)
.+.....+..++ ...+..+.+|+.+||..++.+ |++++++++|.+
T Consensus 219 ~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~ 268 (331)
T cd05624 219 KIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAF 268 (331)
T ss_pred HHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence 111111111111 224567889999999876554 468999998854
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=329.74 Aligned_cols=187 Identities=14% Similarity=0.136 Sum_probs=164.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+++.||+|+||.||+|.... +++.||+|+.... ....|+.++++++||||+++++++......++|||+
T Consensus 68 y~~~~~lg~G~~g~Vy~~~~~~---~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 68 YTVIKTLTPGSEGRVFVATKPG---QPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred cEEEEEecCCCCeEEEEEEECC---CCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 5578889999999999999987 7788999985432 345799999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---Cc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KS 228 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---~~ 228 (527)
+. ++|.+++.. ....+++..++.|+.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++..... ..
T Consensus 139 ~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 215 (357)
T PHA03209 139 YS-SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLG 215 (357)
T ss_pred cC-CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCccccc
Confidence 95 589888864 4567899999999999999999999999 999999999999999999999999998754322 34
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPP 270 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~ 270 (527)
..||+.|+|||++.+..++.++|||||||++|||+++..++.
T Consensus 216 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 216 LAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred ccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 568999999999999999999999999999999999766543
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=317.38 Aligned_cols=246 Identities=23% Similarity=0.311 Sum_probs=198.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+.+.||.|++|.||+|.+.. +..||+|.+.... ...+.+.+|+.++++++||||+++++++. ....++||||
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~----~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNG----TTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcC----CceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 4466788999999999998874 3459999886543 23467999999999999999999999885 4568999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence 99999999997544456899999999999999999999999 9999999999999999999999999997654322
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...++..|+|||.+.+..++.++|||||||++|||+| |..||....... .... +....
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----------~~~~---------~~~~~ 220 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE-----------VLEQ---------VERGY 220 (260)
T ss_pred CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------HHHH---------HHcCC
Confidence 2234567999999988889999999999999999999 888876432110 0000 11111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...+..+.+++.+||..||.+||++.++++.|+.
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 221 RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 112334456779999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=316.10 Aligned_cols=246 Identities=19% Similarity=0.247 Sum_probs=204.0
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+++.||.|+||.||.+.... +++.+++|.+..... .....+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 3 ~~~~~ig~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 3 IPIRVLGKGAFGEATLYRRTE---DDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred eEeeEecccCCceEEEEEEcC---CCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 467788999999999999887 788899999875432 234578999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~ 158 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMA 158 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEcccccccc
Confidence 999999999997544567899999999999999999999999 9999999999999999999999999987654332
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
...+++.|+|||++.+..++.++||||||+++|||++|..||...+... . ...+.....
T Consensus 159 ~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-----------~--------~~~~~~~~~- 218 (256)
T cd08221 159 ETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN-----------L--------VVKIVQGNY- 218 (256)
T ss_pred cccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH-----------H--------HHHHHcCCC-
Confidence 4567899999999988889999999999999999999999986432110 0 001111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
...+...+..+.+++.+||..+|.+||++.++++++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 219 TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 112233456788999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-41 Score=332.95 Aligned_cols=256 Identities=19% Similarity=0.249 Sum_probs=199.0
Q ss_pred ccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcC-CCCccceeEEEEEeC-Ceee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDG-DERL 146 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~-~~~~ 146 (527)
+.+++.||.|+||.||+|.+.. ...+++.||||+++...... ...+.+|+.++.++ +||||+++++++... ...+
T Consensus 9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~ 88 (343)
T cd05103 9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 88 (343)
T ss_pred hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceE
Confidence 4477889999999999998542 11267889999997644222 34688999999999 789999999988654 4678
Q ss_pred EEEEecCCCCHhHHhhhcC-------------------------------------------------------------
Q 009750 147 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 165 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~------------------------------------------------------------- 165 (527)
+||||+++|+|.+++....
T Consensus 89 lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (343)
T cd05103 89 VIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQ 168 (343)
T ss_pred EEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhh
Confidence 9999999999999986421
Q ss_pred ----CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC------ccccCCcc
Q 009750 166 ----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------SYSTNLAY 235 (527)
Q Consensus 166 ----~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~------~~~~t~~y 235 (527)
...+++..+..++.||++||.|||+++ ++||||||+|||++.++.+||+|||++....... ...++..|
T Consensus 169 ~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y 247 (343)
T cd05103 169 EDLYKKVLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 247 (343)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcce
Confidence 123678889999999999999999999 9999999999999999999999999987643221 22345679
Q ss_pred CCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHH
Q 009750 236 TPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEA 314 (527)
Q Consensus 236 ~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (527)
+|||++.+..++.++|||||||++|+|++ |..||+....... ... .+........+...+
T Consensus 248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~----------~~~---------~~~~~~~~~~~~~~~ 308 (343)
T cd05103 248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----------FCR---------RLKEGTRMRAPDYTT 308 (343)
T ss_pred ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH----------HHH---------HHhccCCCCCCCCCC
Confidence 99999988889999999999999999997 8888764321100 000 111111111222234
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 315 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 315 ~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+.+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 568899999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-41 Score=335.00 Aligned_cols=265 Identities=17% Similarity=0.193 Sum_probs=198.9
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeC-----
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----- 142 (527)
..+.+++.||+|+||.||++.+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecC---CCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 345578889999999999999876 7888999999764322 245788999999999999999999998643
Q ss_pred -CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 143 -DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 143 -~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
...++||||+++ +|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccc
Confidence 357999999976 6777764 24888999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc-----chh-------
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK-----FNF------- 286 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~-----~~~------- 286 (527)
..... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......... ...
T Consensus 168 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (355)
T cd07874 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247 (355)
T ss_pred cCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcH
Confidence 65443 345689999999999988899999999999999999999999976542210000000 000
Q ss_pred hHHHHHhc-Ccc-----hhhccccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 287 GALDMIRG-KNI-----LHLMDSHL---EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 287 ~~~~~~~~-~~~-----~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
........ ... ........ ....+...+..+.+||.+||+.||++|||+.++++|-+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~ 313 (355)
T cd07874 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313 (355)
T ss_pred HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcc
Confidence 00000000 000 00000000 00111223456889999999999999999999999854
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=327.40 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=201.4
Q ss_pred ccccCCCCCCCeEEEEEecCC----CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeE
Q 009750 74 IVSESGEKAPNVVYKGRLQDG----NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~----~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 147 (527)
+.+.||+|+||.||++..... ......||+|.++..... ....+.+|+.+++++ +||||+++++++......++
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV 95 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence 677899999999999986421 124567999998754322 245688999999999 69999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCce
Q 009750 148 VAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPR 213 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~k 213 (527)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+|
T Consensus 96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~~k 174 (314)
T cd05099 96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNVMK 174 (314)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCcEE
Confidence 999999999999996532 235889999999999999999999999 99999999999999999999
Q ss_pred eecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchh
Q 009750 214 LSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNF 286 (527)
Q Consensus 214 l~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 286 (527)
|+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..||...+...
T Consensus 175 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---------- 244 (314)
T cd05099 175 IADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE---------- 244 (314)
T ss_pred EccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH----------
Confidence 99999997654321 1123457999999988889999999999999999999 788875432110
Q ss_pred hHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
...... .......+...+..+.+|+.+||..||++|||+.++++.|+.+..
T Consensus 245 -~~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 245 -LFKLLR---------EGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred -HHHHHH---------cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 111111 111112233445678899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=320.40 Aligned_cols=246 Identities=18% Similarity=0.265 Sum_probs=203.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC-CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+++.||.|++|.||+|.+.. +++.||+|.+.... ......+.+|+.+++.++|+||+++++++.++...++|+|
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 3 FTLLECIGKGSFGEVYKAIDKR---TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred hhhhhhhcCCCCeEEEEEEECC---CCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 3466788999999999999987 78899999987653 2234578999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+++++|.+++.. ..+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||+++.....
T Consensus 80 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 155 (274)
T cd06609 80 YCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKR 155 (274)
T ss_pred eeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeeccccccc
Confidence 9999999999963 37899999999999999999999999 999999999999999999999999998765533
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
....+++.|+|||++.+..++.++|||||||++|+|+||+.||...+... ... .+.....
T Consensus 156 ~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-----------~~~---------~~~~~~~ 215 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-----------VLF---------LIPKNNP 215 (274)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-----------HHH---------HhhhcCC
Confidence 24467888999999998889999999999999999999999985432110 000 0001111
Q ss_pred CCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 307 GNFSSE-EATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 307 ~~~~~~-~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+.. .+..+.+++.+||..||.+|||+++++++-.-
T Consensus 216 ~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~ 254 (274)
T cd06609 216 PSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFI 254 (274)
T ss_pred CCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhh
Confidence 111112 45678899999999999999999999987443
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=315.69 Aligned_cols=241 Identities=25% Similarity=0.385 Sum_probs=197.1
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
.||.|+||.||++.+. .++.||+|++...... ..+.+.+|++++++++|+||+++++++......++||||++++
T Consensus 2 ~lg~g~~g~v~~~~~~----~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 2 KIGKGNFGDVYKGVLK----GNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred ccccCCCceEEEEEEe----CCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 5799999999999986 4677999998765433 3457999999999999999999999999999999999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc------c
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS------Y 229 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~------~ 229 (527)
+|.+++.. ....+++..++.++.+++.||.|||+++ ++||||||+|||++.++.+||+|||++........ .
T Consensus 78 ~l~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 78 SLLTFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred cHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 99999964 3446889999999999999999999999 99999999999999999999999999876543221 1
Q ss_pred ccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..+..|+|||.+.++.++.++|||||||++|||+| |..||....... ....+.......
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--------------------~~~~~~~~~~~~ 215 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--------------------TRERIESGYRMP 215 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--------------------HHHHHhcCCCCC
Confidence 22456999999988889999999999999999999 777775432110 001111111122
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+...+..+.+++.+||..+|.+|||+.++++.|.
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 33445667999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=319.91 Aligned_cols=245 Identities=19% Similarity=0.278 Sum_probs=204.0
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
..++.||.|+||.||+|.+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.++...++||||
T Consensus 7 ~~~~~lg~g~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 7 TKLERIGKGSFGEVFKGIDNR---TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhhhcccCCCeEEEEEEEcc---CCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 356778999999999999987 778899999875432 2245789999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06640 84 LGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence 99999999985 356899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...++..|+|||++.+..++.++|||||||++|||+||..||....... ...........
T Consensus 160 ~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------------------~~~~~~~~~~~ 219 (277)
T cd06640 160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--------------------VLFLIPKNNPP 219 (277)
T ss_pred cccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--------------------HhhhhhcCCCC
Confidence 2356788999999988889999999999999999999999985432110 00011111122
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..+...+..+.+++.+||+.+|.+||++.+++.+...
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 256 (277)
T cd06640 220 TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFI 256 (277)
T ss_pred CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHh
Confidence 3445567789999999999999999999999998654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=317.11 Aligned_cols=247 Identities=26% Similarity=0.369 Sum_probs=202.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+.+.||.|+||.||++.+. +++.||||.+.... ...+++.+|+.++++++|+||+++++++......++||||
T Consensus 8 ~~i~~~ig~g~~~~v~~~~~~----~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 8 LKLERKLGAGQFGEVWMGTWN----GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred eeeeeeeccCcceEEEEEEEc----CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 446778899999999999976 44679999987543 3457899999999999999999999999988899999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++++|.+++.......+++..+..++.+|+.||.|||+++ ++|+||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence 99999999997644567899999999999999999999999 9999999999999999999999999987654321
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....+..|+|||.+.+..++.++|||||||++|+|+| |+.||.+..... .... + ....
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-----------~~~~--------~-~~~~ 221 (261)
T cd05034 162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-----------VLEQ--------V-ERGY 221 (261)
T ss_pred hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------HHHH--------H-HcCC
Confidence 1223567999999998889999999999999999999 888886432110 0010 0 1111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...+..+.+++.+||..+|.+||++.++++.|+.
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 112223335678999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=322.64 Aligned_cols=262 Identities=19% Similarity=0.250 Sum_probs=207.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
++.+++.||+|+||+||++.... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.....+++||
T Consensus 6 ~~~~~~~ig~g~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 6 DLETISDLGAGNGGSVSKVKHIP---TGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHcCCCCCeEEEEEEEcC---CCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 45578889999999999999987 788999999875432 23567999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
||+++++|..++. ..+.+++..+..++.+++.||.|||+ .+ ++||||||+||++++++.++|+|||++......
T Consensus 83 e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~ 159 (284)
T cd06620 83 EFMDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159 (284)
T ss_pred ecCCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhcc
Confidence 9999999999986 34578999999999999999999997 46 999999999999999999999999998654322
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
....++..|+|||++.+..++.++|||||||++|+|+||+.||............ ...... ....+.... .
T Consensus 160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~-~ 230 (284)
T cd06620 160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD---PMGILD-----LLQQIVQEP-P 230 (284)
T ss_pred CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh---hhHHHH-----HHHHHhhcc-C
Confidence 3456789999999998888999999999999999999999998754321100000 000000 011111111 1
Q ss_pred CCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 307 GNFS-SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 307 ~~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..++ ...+..+.+|+.+||+.||.+|||+.+++++...++.
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 231 PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 1112 2255678999999999999999999999998766543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=317.06 Aligned_cols=246 Identities=16% Similarity=0.196 Sum_probs=201.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEe-CCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv 148 (527)
+.+++.||.|++|.||++.+.. +++.||||++..... ...+.+.+|++++++++|+||+++++.+.. ...+++|
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRT---DGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcC---CCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEE
Confidence 4477888999999999999987 678899999875432 224568999999999999999999998764 4468999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++++|.+++.......+++.+++.++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 99999999999997644567899999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....+++.|+|||++.+..++.++|||||||++++|++|+.||...+.... ...+.. .
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~-------------------~~~~~~-~ 217 (257)
T cd08223 158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL-------------------VYRIIE-G 217 (257)
T ss_pred ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-------------------HHHHHh-c
Confidence 234578899999999988899999999999999999999999864321100 000111 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.....+...+..+.+++.+||+.||.+|||+.+++++
T Consensus 218 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 218 KLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1112334556779999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=322.71 Aligned_cols=265 Identities=20% Similarity=0.336 Sum_probs=200.4
Q ss_pred cccccCCCCCCCeEEEEEecC-CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 148 (527)
.+++.||+|+||.||++.... +..+++.||+|.++..... ..+.+.+|+.+++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (284)
T cd05079 7 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 86 (284)
T ss_pred hhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEE
Confidence 367889999999999998532 2226788999998755322 245799999999999999999999999875 568999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 87 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05079 87 MEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 164 (284)
T ss_pred EEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCcc
Confidence 999999999999964 2346899999999999999999999999 9999999999999999999999999987654321
Q ss_pred ------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc-cccchhhHHHHHhcCcchhh
Q 009750 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV-PIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 300 (527)
...++..|+|||++.+..++.++|||||||++|||+|++.|....-....... +..... .. ......
T Consensus 165 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~ 238 (284)
T cd05079 165 YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQM-TV-----TRLVRV 238 (284)
T ss_pred ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccc-cH-----HHHHHH
Confidence 23456679999999888899999999999999999998765422100000000 000000 00 000011
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
+........+...+..+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 LEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111111112333567799999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=317.65 Aligned_cols=244 Identities=24% Similarity=0.361 Sum_probs=198.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+.+.||+|+||.||++.. +++.||+|.++... ..+.+.+|+.++++++||||+++++++... ..++|||
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~-----~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e 78 (254)
T cd05083 7 KLTLGEIIGEGEFGAVLQGEY-----TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVME 78 (254)
T ss_pred HceeeeeeccCCCCceEeccc-----CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEE
Confidence 455777889999999999874 56779999986542 346799999999999999999999998754 5799999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-Ccc
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSY 229 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~ 229 (527)
|+++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++...... ...
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (254)
T cd05083 79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNS 157 (254)
T ss_pred CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCC
Confidence 999999999997644556899999999999999999999999 999999999999999999999999998765433 223
Q ss_pred ccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..+..|+|||.+.+..++.++|||||||++|||++ |+.||...+... ... .+.......
T Consensus 158 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----------~~~---------~~~~~~~~~ 217 (254)
T cd05083 158 KLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-----------VKE---------CVEKGYRME 217 (254)
T ss_pred CCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-----------HHH---------HHhCCCCCC
Confidence 34567999999988889999999999999999998 888886432110 001 111111122
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+...+..+.+++.+||+.+|.+||++.+++..|+
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 218 PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 23344567889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=323.13 Aligned_cols=250 Identities=19% Similarity=0.255 Sum_probs=203.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||.|+||.||++.+.. +++.||+|++........+.+.+|++++++++||||+++++++......++|||
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKE---TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcC---CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 45578889999999999999976 788999999876544445679999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (280)
T cd06611 83 FCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR 160 (280)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence 9999999999864 3456999999999999999999999999 999999999999999999999999988654332
Q ss_pred CccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 227 KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
....+++.|+|||++. +..++.++|||||||++|||++|+.||...+... .. ..+.
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-----------~~--------~~~~ 221 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-----------VL--------LKIL 221 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-----------HH--------HHHh
Confidence 2346788999999975 3447789999999999999999999986432110 00 0010
Q ss_pred ccc-cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 302 DSH-LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 302 ~~~-~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
... .....+...+..+.+++.+||+.+|.+||++.+++++-+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 265 (280)
T cd06611 222 KSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFV 265 (280)
T ss_pred cCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhh
Confidence 000 0011223445678899999999999999999999998543
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=322.29 Aligned_cols=243 Identities=20% Similarity=0.302 Sum_probs=200.8
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
+++.||.|+||.||+|.+.. +++.||||.+..... ...+.+.+|+.++++++||||+++++++..+...++||||+
T Consensus 8 ~~~~l~~g~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 8 KLERIGKGSFGEVYKGIDNR---TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHhcCCCCeeEEEEEEcC---CCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 45678999999999999876 788999999875432 22457899999999999999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----c
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK----S 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~----~ 228 (527)
++++|.+++. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... .
T Consensus 85 ~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06642 85 GGGSALDLLK---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhc
Confidence 9999999984 457899999999999999999999999 9999999999999999999999999987654332 2
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..++..|+|||++.+..++.++|||||||++|||++|+.|+....... ....+.......
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------------------~~~~~~~~~~~~ 220 (277)
T cd06642 161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--------------------VLFLIPKNSPPT 220 (277)
T ss_pred ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--------------------HHhhhhcCCCCC
Confidence 356888999999998889999999999999999999999875321110 000011111112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+...+..+.+++.+||+.+|.+||++.+++++-.
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 221 LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence 23345567889999999999999999999999754
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=326.56 Aligned_cols=270 Identities=18% Similarity=0.241 Sum_probs=203.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
+..+.+++.||.|+||.||+|.+.. +++.||+|.+...... ....+.+|+.+++.++||||+++++++......++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKL---TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcC---CCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 4456788899999999999999887 7889999998754322 34568899999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++......
T Consensus 82 v~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 82 VFEYLD-KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred EEeccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 999997 489988864 3456899999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHH-HhcCcc
Q 009750 227 ---KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDM-IRGKNI 297 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~ 297 (527)
....+++.|+|||++.+. .++.++|||||||++|||+||++||...+......... ......+.. ......
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccc
Confidence 233568899999998764 47889999999999999999999997654211000000 000000000 000000
Q ss_pred hhhcccccCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 298 LHLMDSHLEGN----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 298 ~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
........... .....+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f 289 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYF 289 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 00000000000 111235568899999999999999999999998665
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=301.71 Aligned_cols=255 Identities=18% Similarity=0.161 Sum_probs=206.8
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEe--
Q 009750 65 ATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD-- 141 (527)
Q Consensus 65 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~-- 141 (527)
+|++|+-.. +.||-|-.|.|-.|..+. +++.+|+|++.. .....+|+++.... .|||||+++++|+.
T Consensus 59 itedY~is~--qvLG~GinGkV~~C~~k~---T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~ 128 (400)
T KOG0604|consen 59 ITEDYSISW--QVLGAGINGKVVQCVHKR---TQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSY 128 (400)
T ss_pred chhhheehh--hhhccccCCceEEEEecc---chhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhc
Confidence 444444332 468999999999999998 888999999863 35688999998888 69999999999864
Q ss_pred --CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC---CCCceeec
Q 009750 142 --GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSC 216 (527)
Q Consensus 142 --~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~---~~~~kl~D 216 (527)
...+.+|||+|+||.|+..++.+..+.+++.++..|++||+.|+.|||+.+ |.||||||+|+|.+. |..+||+|
T Consensus 129 ~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 129 QGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred cCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecc
Confidence 346789999999999999999878888999999999999999999999999 999999999999964 45699999
Q ss_pred ccCccccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 217 FGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 217 FG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
||+|+..... .+-+-||.|.|||++...+|+..+|+||+||++|-||+|.+||....-.. +.
T Consensus 208 fGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a---------------is 272 (400)
T KOG0604|consen 208 FGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---------------IS 272 (400)
T ss_pred cccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc---------------CC
Confidence 9999876532 45577999999999998999999999999999999999999997542110 01
Q ss_pred cCcchhhcccc--cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 294 GKNILHLMDSH--LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 294 ~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.+-..+|.... +..+-....++...++|+++|..+|.+|.|+.+++.|-+-.
T Consensus 273 pgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~ 326 (400)
T KOG0604|consen 273 PGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWIN 326 (400)
T ss_pred hhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhc
Confidence 11111221111 11122245688899999999999999999999999987643
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=318.62 Aligned_cols=250 Identities=19% Similarity=0.269 Sum_probs=189.4
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
++||+|+||.||+|....+. ....+|+|.+...... ....+.+|+.+++.++||||+++++.+......++||||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGM-SKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCC-CCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 35799999999999765432 4567899987654322 235688999999999999999999999999999999999999
Q ss_pred CCHhHHhhhcC---CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-----
Q 009750 155 DTLAKHLFHWE---NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----- 226 (527)
Q Consensus 155 g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----- 226 (527)
|+|.+++.... ....++...+.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999997532 233567888999999999999999999 999999999999999999999999998653221
Q ss_pred -CccccCCccCCcccccC-------CcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 227 -KSYSTNLAYTPPEYLRN-------GRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~-------~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
....+++.|+|||++.. ..++.++|||||||++|||++ |..||....... ..........
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-----------~~~~~~~~~~ 227 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-----------VLKQVVREQD 227 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-----------HHHHHhhccC
Confidence 12234677999998743 346889999999999999999 677765432100 0000001111
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..+. ....+...+..+.+++..|| .||.+|||+.+|++.|.
T Consensus 228 ~~~~----~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 228 IKLP----KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccCC----CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1111 11223344566778999999 59999999999998773
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=332.47 Aligned_cols=267 Identities=19% Similarity=0.231 Sum_probs=198.8
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeC-----
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----- 142 (527)
..+.+++.||.|+||.||+|.+.. +++.||||++..... ...+.+.+|+.+|++++||||+++++++...
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTR---LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECC---CCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 345578889999999999999887 788999999875432 2235688999999999999999999988643
Q ss_pred -CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 143 -DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 143 -~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
...++++|++ +++|..++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~ 166 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLAR 166 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccce
Confidence 3478999998 779998884 456999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC-CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHHHhcC
Q 009750 222 NSRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDMIRGK 295 (527)
Q Consensus 222 ~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 295 (527)
..... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||++.+......... .............
T Consensus 167 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07878 167 QADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSE 246 (343)
T ss_pred ecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchh
Confidence 65443 34578999999999977 468999999999999999999999997653211000000 0000000000000
Q ss_pred cchhhcccc--cCC-C---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 296 NILHLMDSH--LEG-N---FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 296 ~~~~~~~~~--~~~-~---~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.....+... ... . ......+.+.+|+.+||+.||.+|||+.+++.|-+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~ 301 (343)
T cd07878 247 HARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYF 301 (343)
T ss_pred hHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcch
Confidence 000000000 000 0 001123457899999999999999999999998554
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=315.63 Aligned_cols=249 Identities=19% Similarity=0.234 Sum_probs=203.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+...+|.|+||.||+|.... +++.+++|++........+.+.+|++++++++||||+++++++.....++++|||
T Consensus 5 ~~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 5 YELIQRIGSGTYGDVYKARDIA---TGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred eEEEEEecCCCceEEEEeEecC---CCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 3466788999999999999987 6788999999876555567899999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----C
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----K 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~ 227 (527)
+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++...... .
T Consensus 82 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (262)
T cd06613 82 CGGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK 159 (262)
T ss_pred CCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence 999999999864 2367899999999999999999999999 999999999999999999999999998764432 2
Q ss_pred ccccCCccCCcccccCC---cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 SYSTNLAYTPPEYLRNG---RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~---~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...++..|+|||.+.+. .++.++|||||||++|||+||+.||...+... .......... . .
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~-----------~~~~~~~~~~----~-~ 223 (262)
T cd06613 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR-----------ALFLISKSNF----P-P 223 (262)
T ss_pred cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHHHHhccC----C-C
Confidence 34678889999999776 78999999999999999999999986432110 0000000000 0 0
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.........+..+.+++.+||..+|.+|||+.+++.+
T Consensus 224 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 224 PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0011233456779999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=322.65 Aligned_cols=259 Identities=19% Similarity=0.240 Sum_probs=200.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCC-------------CceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGND-------------NRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLI 136 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~-------------~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~ 136 (527)
.+.+++.||+|+||.||+|.+..... .+..||+|.+...... ..+.+.+|++++++++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 34578899999999999998865321 2356899998765432 346789999999999999999999
Q ss_pred EEEEeCCeeeEEEEecCCCCHhHHhhhcC---------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC
Q 009750 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWE---------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (527)
Q Consensus 137 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~ 207 (527)
+++..++..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeec
Confidence 99999999999999999999999996432 126899999999999999999999999 99999999999999
Q ss_pred CCCCceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh--CCCCCCCCCcccccc
Q 009750 208 ENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS--GKHIPPSHDMVVWNT 279 (527)
Q Consensus 208 ~~~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt--g~~p~~~~~~~~~~~ 279 (527)
.++.++|+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~---- 240 (296)
T cd05051 165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ---- 240 (296)
T ss_pred CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH----
Confidence 99999999999987643321 2344678999999988889999999999999999998 55565432110
Q ss_pred ccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 280 VPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..+..... .............+...+..+.+|+.+||+.||.+|||+.++++.|+
T Consensus 241 -------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 -------QVIENAGH--FFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred -------HHHHHHHh--ccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 00000000 00000000111122334567999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=321.99 Aligned_cols=254 Identities=22% Similarity=0.309 Sum_probs=199.6
Q ss_pred ccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||.||+|..++ ....+..||+|.+...... ....+.+|+.+++.++||||+++++++......++|
T Consensus 8 ~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 87 (288)
T cd05061 8 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV 87 (288)
T ss_pred ceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE
Confidence 4477889999999999997653 1124568999998754322 234688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcC--------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCc
Q 009750 149 AEYMPNDTLAKHLFHWE--------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
|||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~~ 166 (288)
T cd05061 88 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGMT 166 (288)
T ss_pred EeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCcc
Confidence 99999999999996421 234567788999999999999999999 999999999999999999999999998
Q ss_pred cccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHh
Q 009750 221 KNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 221 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
+..... ....++..|+|||.+.++.++.++|||||||++|||++ |..||.+.+... ....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-----------~~~~-- 233 (288)
T cd05061 167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-----------VLKF-- 233 (288)
T ss_pred ccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------HHHH--
Confidence 754322 12234667999999998889999999999999999999 677775422100 0000
Q ss_pred cCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
+... .....+...+..+.+++.+||+.||.+|||+.++++.|....
T Consensus 234 ------~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 234 ------VMDG-GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred ------HHcC-CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1111 011122334567999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=315.89 Aligned_cols=241 Identities=23% Similarity=0.354 Sum_probs=192.0
Q ss_pred cCCCCCCCeEEEEEecCCC-------CCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 77 ESGEKAPNVVYKGRLQDGN-------DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~-------~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.||+|+||.||+|.+.... .....|++|.+...... ...+.+|+.+++.++||||+++++++.. ...++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 5799999999999998621 01145888887655433 5789999999999999999999999988 7789999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-------CceeecccCccc
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-------DPRLSCFGLMKN 222 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-------~~kl~DFG~a~~ 222 (527)
||+++|+|.+++... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++ .+||+|||++..
T Consensus 80 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 80 EYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 999999999999742 237899999999999999999999999 99999999999999888 799999999987
Q ss_pred cCCCCccccCCccCCcccccCC--cCCCCcccchhhHHHHHHHhC-CCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 223 SRDGKSYSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSG-KHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 223 ~~~~~~~~~t~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
........++..|+|||++.+. .++.++|||||||++|||++| ..|+...+... ......
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~-----------~~~~~~------ 220 (259)
T cd05037 158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE-----------KERFYQ------ 220 (259)
T ss_pred cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh-----------HHHHHh------
Confidence 6655556677889999999876 689999999999999999995 55553321100 000000
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.. ...+......+.+++.+||..+|.+|||+.++++.|.
T Consensus 221 --~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 --DQ---HRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --cC---CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 0011111267889999999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=319.25 Aligned_cols=246 Identities=23% Similarity=0.331 Sum_probs=197.5
Q ss_pred cCCCCCCCeEEEEEecCCC---CCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 77 ESGEKAPNVVYKGRLQDGN---DNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~---~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.||.|+||.||+|...+.. ..++.||||.+..... .....+.+|+.+++.++||||+++++++......++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 4699999999999986421 1336799999875432 23567999999999999999999999999999999999999
Q ss_pred CCCCHhHHhhhc-----CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-----CceeecccCccc
Q 009750 153 PNDTLAKHLFHW-----ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-----DPRLSCFGLMKN 222 (527)
Q Consensus 153 ~~g~L~~~l~~~-----~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-----~~kl~DFG~a~~ 222 (527)
++++|.+++... ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++ .+||+|||++..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 999999999643 2234789999999999999999999999 99999999999999887 899999999875
Q ss_pred cCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 223 SRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 223 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
..... ....+..|+|||++.++.++.++|||||||++|||+| |+.||...+... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-----------~~~----- 224 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-----------VLQ----- 224 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-----------HHH-----
Confidence 43221 2234678999999998899999999999999999998 998886432110 000
Q ss_pred cchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+........+...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 225 ----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 225 ----HVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ----HHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00111111233445677899999999999999999999999885
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=307.85 Aligned_cols=275 Identities=17% Similarity=0.230 Sum_probs=206.1
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCC-ceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEe-CCee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDN-RRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD-GDER 145 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~-~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~ 145 (527)
..+.+++.||+|+||.||+++.++++.. .+.+|||+++.....+ .....+|+.+++.|+|||||.|..+|.. +..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 3567899999999999999987765421 3479999998664322 4578999999999999999999999987 7889
Q ss_pred eEEEEecCCCCHhHHhhhcC---CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC----CCceeeccc
Q 009750 146 LLVAEYMPNDTLAKHLFHWE---NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN----GDPRLSCFG 218 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~----~~~kl~DFG 218 (527)
+|++||++. +|..+++..+ ...++...+.+|+.||+.|+.|||++= |+||||||.|||+..+ |.+||+|||
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeeccc
Confidence 999999998 8999997532 346888999999999999999999998 9999999999999877 899999999
Q ss_pred CccccCCC-------CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhh--H
Q 009750 219 LMKNSRDG-------KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG--A 288 (527)
Q Consensus 219 ~a~~~~~~-------~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~--~ 288 (527)
+++..... ...+.|.+|+|||.++|.. ||.+.|||++|||+.||+|-++.|.+.........++....- .
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 99976543 3456799999999999865 899999999999999999999998776432211111111000 0
Q ss_pred HHHHh---cCcchhh---------cccccCCCCCH-----------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 289 LDMIR---GKNILHL---------MDSHLEGNFSS-----------EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 289 ~~~~~---~~~~~~~---------~~~~~~~~~~~-----------~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...+. ...+..+ +.......+.. ..++...+|+.++|..||-+|.|++++++|.-..
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~ 341 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFT 341 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccc
Confidence 00000 0000000 00000000000 0123467999999999999999999999987654
Q ss_pred c
Q 009750 346 Q 346 (527)
Q Consensus 346 ~ 346 (527)
.
T Consensus 342 ~ 342 (438)
T KOG0666|consen 342 E 342 (438)
T ss_pred c
Confidence 3
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=322.35 Aligned_cols=252 Identities=23% Similarity=0.322 Sum_probs=199.8
Q ss_pred ccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||.||++..... ..+++.||||++....... ...+.+|+.++++++||||+++++++..+...++|
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv 86 (288)
T cd05050 7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLL 86 (288)
T ss_pred ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEE
Confidence 34678889999999999987531 1256789999987553222 35699999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcC--------------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC
Q 009750 149 AEYMPNDTLAKHLFHWE--------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE 208 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~ 208 (527)
|||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~~ 165 (288)
T cd05050 87 FEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVGE 165 (288)
T ss_pred EecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEecC
Confidence 99999999999996421 124788899999999999999999999 999999999999999
Q ss_pred CCCceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCcccccccc
Q 009750 209 NGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVP 281 (527)
Q Consensus 209 ~~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~ 281 (527)
++.+||+|||++....... ....+..|+|||.+.+..++.++|||||||++|||++ |..||.+.....
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~----- 240 (288)
T cd05050 166 NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE----- 240 (288)
T ss_pred CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 9999999999987543221 2234567999999988889999999999999999998 777775432110
Q ss_pred ccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 282 IKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......... ....+...+..+.+|+.+||+.||.+|||+.|+++.|+.
T Consensus 241 ------~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 241 ------VIYYVRDGN---------VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ------HHHHHhcCC---------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111111111 111233445678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=326.24 Aligned_cols=249 Identities=20% Similarity=0.208 Sum_probs=203.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||.|+||.||+|.... +++.||||.+...... ..+.+.+|+++++.++||||+++++.+......++|
T Consensus 3 y~~~~~ig~g~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 3 FKKIKLLGKGDVGRVFLVRLKG---TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred eEEeeeecCCccEEEEEEEEcC---CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEE
Confidence 3466788999999999999987 7889999999865433 245689999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+.+++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 99999999999997544567999999999999999999999999 999999999999999999999999987643221
Q ss_pred -------------------------------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcc
Q 009750 227 -------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMV 275 (527)
Q Consensus 227 -------------------------------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~ 275 (527)
....+|..|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~ 238 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD 238 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 1235678899999999888999999999999999999999998654311
Q ss_pred ccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC----HHHHHHHhc
Q 009750 276 VWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN----TKDLVSTLA 343 (527)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt----~~~vl~~L~ 343 (527)
. ....+.............+..+.+++.+||..||++||| +.+++.+-+
T Consensus 239 ~-------------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~ 291 (316)
T cd05574 239 E-------------------TFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPF 291 (316)
T ss_pred H-------------------HHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCch
Confidence 0 011111111111111125677999999999999999999 888888643
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=314.42 Aligned_cols=246 Identities=24% Similarity=0.362 Sum_probs=198.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+..+.+.||.|+||.||++.+. +++.+|+|.+.... .....|.+|++++++++||||+++++++......++|||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~----~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL----EKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe----CCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 4457788999999999999886 45679999987543 335679999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++++|.+++.. ....+++..++.++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 157 (256)
T cd05112 80 FMEHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS 157 (256)
T ss_pred cCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence 9999999999864 3356899999999999999999999999 9999999999999999999999999987543321
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...++..|+|||++.+..++.++|||||||++|||++ |..||....... ..... ...
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----------~~~~~---------~~~ 217 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-----------VVETI---------NAG 217 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-----------HHHHH---------hCC
Confidence 1234568999999998889999999999999999998 888875432110 00000 000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.....+...+..+.+|+.+||+.+|++|||+.++++.|.
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 218 FRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 111112223567899999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=314.02 Aligned_cols=244 Identities=18% Similarity=0.231 Sum_probs=202.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+...||.|+||.||+|.... +++.|++|.+..... .+++.+|++++++++||||+++++++......++++||
T Consensus 5 y~~~~~i~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 5 FDILEKLGEGSYGSVYKAIHKE---TGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred chhhhhhcCCCCeEEEEEEEcC---CCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 3366778999999999999987 678899999876532 67899999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (256)
T cd06612 80 CGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRN 157 (256)
T ss_pred CCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccc
Confidence 999999999964 3467899999999999999999999999 9999999999999999999999999987654332
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc-ccC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS-HLE 306 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 306 (527)
...++..|+|||++.+..++.++|||||||++|+|++|+.||...+.... ...+... ...
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-------------------~~~~~~~~~~~ 218 (256)
T cd06612 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-------------------IFMIPNKPPPT 218 (256)
T ss_pred cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-------------------hhhhccCCCCC
Confidence 33568899999999888899999999999999999999999864321100 0000000 001
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
...+...+..+.+++.+||+.||.+|||+.+++.+
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 219 LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 11233445678999999999999999999999976
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=321.25 Aligned_cols=265 Identities=20% Similarity=0.224 Sum_probs=198.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+++.||.|++|.||+|.... +++.||||+++..... ..+.+.+|+.+++.++||||+++++++..+...++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKK---TGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred ceEeeEecccCceEEEEEEECC---CCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence 3467788999999999999987 7889999998754322 2457899999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcC-CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 150 EYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
||++ ++|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 9997 58988886432 357899999999999999999999999 999999999999999999999999998754322
Q ss_pred --CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHHHh-cCcch
Q 009750 227 --KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDMIR-GKNIL 298 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~ 298 (527)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.||.+........... ......+.... .....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 223567889999998664 47889999999999999999999987543211000000 00000000000 00000
Q ss_pred hhcccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 299 HLMDSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 299 ~~~~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
......... ......+.++.+||.+||+.||.+|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000000 0111245678899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=314.78 Aligned_cols=245 Identities=17% Similarity=0.218 Sum_probs=203.4
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+++.||.|+||.||++.... +++.||||.+..... ...+++.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~~~~lg~g~~g~~~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 3 VKVKKIGEGSFGKAILVKSKE---DGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred eEEEEeccCCceEEEEEEEcC---CCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 467788999999999999987 788999999875432 234579999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++++|.+++.......+++..++.++.||+.||.|||+.+ ++|+||+|+|||++.++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 158 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA 158 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhh
Confidence 999999999997544456899999999999999999999999 9999999999999999999999999987654432
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
...+++.|+|||++.+..++.++|+|||||++++|++|+.||...+... ....+... ..
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-------------------~~~~~~~~-~~ 218 (256)
T cd08218 159 RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN-------------------LVLKIIRG-SY 218 (256)
T ss_pred hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH-------------------HHHHHhcC-CC
Confidence 3457888999999998889999999999999999999999985432110 00011111 11
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
...+...+..+.++|.+||+.+|.+||++.+|+++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 219 PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 12234456678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=318.81 Aligned_cols=253 Identities=20% Similarity=0.281 Sum_probs=202.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCC-CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+++.||+|+||.||+|.++... .....||+|.+...... ....+.+|+.++++++||||+++++++.. ...++||
T Consensus 9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 87 (279)
T cd05057 9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLIT 87 (279)
T ss_pred cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEE
Confidence 346778999999999999986521 12346999988765432 24578999999999999999999999987 7899999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc-
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS- 228 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 228 (527)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.......
T Consensus 88 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~ 165 (279)
T cd05057 88 QLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKE 165 (279)
T ss_pred ecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCcccc
Confidence 99999999999974 3446899999999999999999999998 99999999999999999999999999976543321
Q ss_pred -----cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 229 -----YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 229 -----~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
..++..|+|||.+....++.++|+|||||++||+++ |+.||....... +...+.
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------------------~~~~~~ 225 (279)
T cd05057 166 YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--------------------IPDLLE 225 (279)
T ss_pred eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--------------------HHHHHh
Confidence 112467999999988889999999999999999999 999886432110 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.......+...+..+.+++.+||..||.+||++.++++.|..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 226 KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111112233344568899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=320.13 Aligned_cols=267 Identities=23% Similarity=0.314 Sum_probs=204.9
Q ss_pred ccccccCCCCCCCeEEEEEecCC-CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEe--CCeeeE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDG-NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLL 147 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~l 147 (527)
..+++.||+|+||.||++..... ..+++.||||+++..... ..+.|.+|+++++.++||||+++++++.. ....++
T Consensus 6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05038 6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRL 85 (284)
T ss_pred chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEE
Confidence 44678889999999999987532 225788999999866543 35679999999999999999999999987 557899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 227 (527)
||||+++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 86 v~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05038 86 IMEYLPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPEDK 163 (284)
T ss_pred EEecCCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccccccccccCC
Confidence 9999999999999964 2336899999999999999999999999 9999999999999999999999999998765321
Q ss_pred c-------cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 228 S-------YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 228 ~-------~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
. ...+..|++||.+.+..++.++|||||||++|||+||..|+............... ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 238 (284)
T cd05038 164 DYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQ-----GQMIVTRLLEL 238 (284)
T ss_pred cceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccccc-----ccccHHHHHHH
Confidence 1 12345699999998888999999999999999999999887543211100000000 00000001111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
+........+..++..+.+|+.+||+.+|.+|||+.++++.|+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 239 LKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111112222334456799999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=324.73 Aligned_cols=262 Identities=17% Similarity=0.235 Sum_probs=189.5
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEe--CCeeeEEEEecC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLLVAEYMP 153 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~E~~~ 153 (527)
.+||+|+||.||+|....+. +++.||+|.+.... ....+.+|+.++++++||||+++++++.. ....++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~-~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGK-DEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCC-ccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 36799999999999976533 56789999987543 23468899999999999999999999854 457899999997
Q ss_pred CCCHhHHhhhc-------CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe----CCCCCceeecccCccc
Q 009750 154 NDTLAKHLFHW-------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----DENGDPRLSCFGLMKN 222 (527)
Q Consensus 154 ~g~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll----~~~~~~kl~DFG~a~~ 222 (527)
+ +|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++.
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 5 788777421 1235889999999999999999999999 9999999999999 5667999999999976
Q ss_pred cCCC-------CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchh--------
Q 009750 223 SRDG-------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNF-------- 286 (527)
Q Consensus 223 ~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-------- 286 (527)
.... ....+|+.|+|||++.+. .++.++|||||||++|||+||++||...........+.....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 5432 234678999999999764 579999999999999999999999865432211110000000
Q ss_pred -----hHHHHHhc-CcchhhcccccCC------------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 287 -----GALDMIRG-KNILHLMDSHLEG------------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 287 -----~~~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
..+..... ............. .........+.+|+.+||+.||.+|||+.++++|-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp 315 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDP 315 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCC
Confidence 00000000 0000000000000 00011234578999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=320.44 Aligned_cols=248 Identities=19% Similarity=0.225 Sum_probs=201.3
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.++..||.|+||.||+|.... +++.||+|++....... .+.+.+|+++++.++||||++++++|......++|
T Consensus 17 y~~~~~lg~g~~g~vy~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 17 FTDLREIGHGSFGAVYFARDVR---TNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhheeecCCCCeEEEEEEEcC---CCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 3456778999999999999987 78899999987543332 24688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 228 (527)
|||+++ +|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 94 ~e~~~g-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~ 170 (307)
T cd06607 94 MEYCLG-SASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS 170 (307)
T ss_pred HHhhCC-CHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCC
Confidence 999974 77777753 3456899999999999999999999999 99999999999999999999999999987766666
Q ss_pred cccCCccCCccccc---CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 229 YSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 229 ~~~t~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
..+++.|+|||++. ...++.++|||||||++|||+||+.||...+.... . ..+.....
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-----------~--------~~~~~~~~ 231 (307)
T cd06607 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----------L--------YHIAQNDS 231 (307)
T ss_pred ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-----------H--------HHHhcCCC
Confidence 77889999999884 35688999999999999999999999854321100 0 00000000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...+..+.+++.+||..||.+||++.+++.+.+.
T Consensus 232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 270 (307)
T cd06607 232 PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFV 270 (307)
T ss_pred CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 111123356678999999999999999999999987654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=320.21 Aligned_cols=265 Identities=20% Similarity=0.263 Sum_probs=200.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.++..||+|+||.||+|.+.. +++.||+|++..... ...+.+.+|+.++++++||||+++++++......++||
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 3 YEKLSKIGEGSYGVVFKCRNRE---TGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred eeeeeeecccCCeEEEEEEECC---CCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 4467788999999999999987 788999999875432 22356889999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++++|..++. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07847 80 EYCDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD 156 (286)
T ss_pred eccCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCccc
Confidence 9999988888775 3456899999999999999999999999 9999999999999999999999999987654432
Q ss_pred --ccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHHHhcCcc-hh
Q 009750 228 --SYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDMIRGKNI-LH 299 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~ 299 (527)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+......... .........+..... ..
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07847 157 YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKG 236 (286)
T ss_pred ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccc
Confidence 3456788999999876 457899999999999999999999997654221000000 000000000000000 00
Q ss_pred hcccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 300 LMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 300 ~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
..........+ ...+..+.+|+.+||+.||++||++.+++.|-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~ 284 (286)
T cd07847 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHP 284 (286)
T ss_pred ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCC
Confidence 00000000000 12356788999999999999999999998764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=321.47 Aligned_cols=252 Identities=20% Similarity=0.225 Sum_probs=202.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+++.||+|+||.||++.+.. +++.||+|.++..... ....+.+|+.++++++||||+++++.+...+..++|||
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 3 IEVLDELGKGNYGSVYKVLHRP---TGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred hhhhhhhcccCCeEEEEEEEcC---CCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 4578899999999999999987 7889999998754321 23578999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcC-CCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 151 YMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|+++++|..++.... ...+++..+..++.+|+.||.|||+. + ++|+||||+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA 158 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence 999999999886421 34789999999999999999999974 6 999999999999999999999999998765332
Q ss_pred CccccCCccCCcccccCCc------CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 227 KSYSTNLAYTPPEYLRNGR------VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~------~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
....+++.|+|||++.+.. ++.++|||||||++|+|++|+.||........ .. ....+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-----------~~-----~~~~~ 222 (286)
T cd06622 159 KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI-----------FA-----QLSAI 222 (286)
T ss_pred ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH-----------HH-----HHHHH
Confidence 3345778999999985543 57899999999999999999999864321100 00 00111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.. ......+...+..+.+|+.+||+.+|.+||++.+++.+-+.
T Consensus 223 ~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~ 265 (286)
T cd06622 223 VD-GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWL 265 (286)
T ss_pred hh-cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhh
Confidence 11 11123444567788999999999999999999999987654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=313.31 Aligned_cols=246 Identities=20% Similarity=0.285 Sum_probs=198.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
..+.+.||+|+||.||++.+. .+..+|+|.+.... ...+.+.+|+.+++.++|+||+++++++.. ...+++|||
T Consensus 8 ~~~~~~lg~g~~~~vy~~~~~----~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 8 LKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred eeEEeEecCccceEEEEEEec----CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 346778899999999999876 34559999887543 234679999999999999999999999887 778999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc---
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS--- 228 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--- 228 (527)
+++++|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 160 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence 99999999997645566889999999999999999999998 99999999999999999999999999876543221
Q ss_pred --cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 229 --YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 229 --~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
..++..|+|||++.+..++.++|+|||||++|+|+| |..||...+... ...... ...
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-----------~~~~~~---------~~~ 220 (260)
T cd05073 161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----------VIRALE---------RGY 220 (260)
T ss_pred cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-----------HHHHHh---------CCC
Confidence 223567999999988889999999999999999999 888886542110 001111 111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 221 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 221 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111223345678899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=319.45 Aligned_cols=257 Identities=18% Similarity=0.242 Sum_probs=201.7
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeE
Q 009750 58 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLI 136 (527)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~ 136 (527)
++.++....+.|. +...||.|+||.||+|.+.. +++.||+|++.... ....++..|+.++.++ +|+||++++
T Consensus 7 ~~~~~~~~~~~~~---~~~~lg~g~~~~v~~~~~~~---~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~ 79 (282)
T cd06636 7 DLSALRDPAGIFE---LVEVVGNGTYGQVYKGRHVK---TGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYY 79 (282)
T ss_pred hhhhhcChhhhhh---hheeeccCCCeEEEEEEEcC---CCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 3444444444444 56778999999999999987 78899999986543 2345788999999999 799999999
Q ss_pred EEEEe------CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 137 GYCCD------GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 137 ~~~~~------~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
+++.. ...++++|||+++|+|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++
T Consensus 80 ~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~ 158 (282)
T cd06636 80 GAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENA 158 (282)
T ss_pred eehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCC
Confidence 99853 457899999999999999997655567889999999999999999999999 99999999999999999
Q ss_pred CceeecccCccccCC----CCccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc
Q 009750 211 DPRLSCFGLMKNSRD----GKSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP 281 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~----~~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~ 281 (527)
.++|+|||++..... .....+++.|+|||++. +..++.++|||||||++|||++|..||.......
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~----- 233 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR----- 233 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh-----
Confidence 999999999875432 23456788999999986 3457889999999999999999999985432100
Q ss_pred ccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 282 IKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
....+.............+..+.+||.+||+.||.+|||+.+++++
T Consensus 234 --------------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 234 --------------ALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred --------------hhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 0000001101111112345678999999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=318.61 Aligned_cols=254 Identities=19% Similarity=0.262 Sum_probs=201.5
Q ss_pred cccccCCCCCCCeEEEEEecCCC-CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEe-CCeeeEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLVA 149 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~ 149 (527)
.+.+.||+|+||.||+|.+.... ..+..|++|++...... ..+.+.+|+.++++++||||+++++++.. +...++++
T Consensus 9 ~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 88 (280)
T cd05043 9 TLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLY 88 (280)
T ss_pred EEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEE
Confidence 35667899999999999987521 13678999998754322 24568999999999999999999999876 46789999
Q ss_pred EecCCCCHhHHhhhcCC------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 150 EYMPNDTLAKHLFHWEN------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++..
T Consensus 89 ~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~~~ 167 (280)
T cd05043 89 PYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSRDL 167 (280)
T ss_pred EcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCcccc
Confidence 99999999999864322 46899999999999999999999998 999999999999999999999999999764
Q ss_pred CCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 224 RDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 224 ~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
.... ...++..|+|||++.+..++.++|||||||++||+++ |+.||...+... ......
T Consensus 168 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----------~~~~~~--- 233 (280)
T cd05043 168 FPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-----------MAAYLK--- 233 (280)
T ss_pred cCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-----------HHHHHH---
Confidence 3321 2234667999999988889999999999999999999 998885432110 001111
Q ss_pred chhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.......+..++..+.+++.+||..||++|||+.++++.|+.+..
T Consensus 234 ------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 234 ------DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred ------cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111111223345678999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=325.71 Aligned_cols=248 Identities=21% Similarity=0.248 Sum_probs=212.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+..+.+++.||.|.|+.|..++... ++..||||.+.+..... ...+.+|+++|..|+|||||+++.+.+....+|
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~---t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHIL---TGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecC---CCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 3345588899999999999999998 88999999998875433 345899999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+.+|.+++++. ..+++.+..+..++.|+.+|++|||+++ |||||||.+||||+.+..+||+|||++..+...
T Consensus 132 lV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeeccc
Confidence 9999999999999998 5667778999999999999999999999 999999999999999999999999999876643
Q ss_pred ---CccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.+.+|++.|.|||++.+..| ++.+|+||+|++||-|+.|..||.+... ..+-+
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-----------------------k~Lr~ 265 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-----------------------KELRP 265 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-----------------------ccccc
Confidence 57899999999999999876 6799999999999999999999976421 11111
Q ss_pred cccCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 303 SHLEG--NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 303 ~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
..+.+ ..+.-.+.++.+||+++|..+|.+|++++++.++-+.-
T Consensus 266 rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n 310 (596)
T KOG0586|consen 266 RVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRN 310 (596)
T ss_pred hheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccc
Confidence 11211 13444556788999999999999999999999987653
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=319.08 Aligned_cols=257 Identities=20% Similarity=0.264 Sum_probs=196.9
Q ss_pred cccccCCCCCCCeEEEEEecC-------------CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQD-------------GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGY 138 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~-------------~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~ 138 (527)
.+.+.||+|+||.||++.... ...+...||+|++...... ...++.+|+.+++.++|+||++++++
T Consensus 8 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~ 87 (296)
T cd05095 8 TFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAV 87 (296)
T ss_pred eeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 467789999999999986542 1114567999999765322 24579999999999999999999999
Q ss_pred EEeCCeeeEEEEecCCCCHhHHhhhcCC---------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC
Q 009750 139 CCDGDERLLVAEYMPNDTLAKHLFHWEN---------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (527)
Q Consensus 139 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~---------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~ 209 (527)
+...+..++||||+++|+|.+++..... ..+++..+..++.||+.||.|||+.+ ++||||||+|||++.+
T Consensus 88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~~~ 166 (296)
T cd05095 88 CITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKN 166 (296)
T ss_pred EecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEcCC
Confidence 9999999999999999999999964321 24778899999999999999999999 9999999999999999
Q ss_pred CCceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh--CCCCCCCCCcccccccc
Q 009750 210 GDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS--GKHIPPSHDMVVWNTVP 281 (527)
Q Consensus 210 ~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt--g~~p~~~~~~~~~~~~~ 281 (527)
+.++|+|||++....... ...+++.|++||+..++.++.++|||||||++|||++ |..||........
T Consensus 167 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~---- 242 (296)
T cd05095 167 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQV---- 242 (296)
T ss_pred CCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHH----
Confidence 999999999987643321 2233578999999888889999999999999999998 5566643221110
Q ss_pred ccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 282 IKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
............ . ......+..++..+.+|+.+||+.||.+||++.++++.|+
T Consensus 243 ---~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 243 ---IENTGEFFRDQG-R-----QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ---HHHHHHHHhhcc-c-----cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 000000000000 0 0001112334567899999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=323.56 Aligned_cols=243 Identities=19% Similarity=0.271 Sum_probs=199.2
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
..||.|+||.||++.... +++.||||++........+.+.+|+.+++.++|+||+++++.+...+..++||||++++
T Consensus 28 ~~lg~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~ 104 (292)
T cd06658 28 IKIGEGSTGIVCIATEKH---TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG 104 (292)
T ss_pred hcccCCCCeEEEEEEECC---CCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence 457999999999999876 77889999987655444567999999999999999999999999999999999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Ccccc
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSYST 231 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~~~~ 231 (527)
+|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++...... ....+
T Consensus 105 ~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 180 (292)
T cd06658 105 ALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVG 180 (292)
T ss_pred cHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeec
Confidence 9999884 346899999999999999999999999 999999999999999999999999998654322 23467
Q ss_pred CCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCH
Q 009750 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS 311 (527)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (527)
+..|+|||.+.+..++.++|||||||++|||++|+.||...+... ..... ...+..... ...
T Consensus 181 ~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-----------~~~~~-----~~~~~~~~~--~~~ 242 (292)
T cd06658 181 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-----------AMRRI-----RDNLPPRVK--DSH 242 (292)
T ss_pred CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHHH-----HhcCCCccc--ccc
Confidence 889999999988889999999999999999999999986432110 00000 001111111 112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 312 EEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 312 ~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..+..+.+++.+||..||.+|||+.+++++-.
T Consensus 243 ~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~ 274 (292)
T cd06658 243 KVSSVLRGFLDLMLVREPSQRATAQELLQHPF 274 (292)
T ss_pred ccCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence 34556889999999999999999999998744
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=316.67 Aligned_cols=252 Identities=21% Similarity=0.297 Sum_probs=201.1
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
.+...||.|+||.||+|.+.........||||....... ...+.+.+|+.++++++||||+++++++.+ ...++||||
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~ 87 (270)
T cd05056 9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMEL 87 (270)
T ss_pred eeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEc
Confidence 356788999999999999865322345799999876542 234579999999999999999999999875 557899999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc---
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS--- 228 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--- 228 (527)
+++|+|.+++.. ....+++..++.++.+|+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.......
T Consensus 88 ~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 165 (270)
T cd05056 88 APLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA 165 (270)
T ss_pred CCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeecccccceec
Confidence 999999999964 2346899999999999999999999999 99999999999999999999999999876543321
Q ss_pred --cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 229 --YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 229 --~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
..++..|+|||.+.+..++.++|||||||++|||++ |..||...+... ....... ..
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-----------~~~~~~~---------~~ 225 (270)
T cd05056 166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND-----------VIGRIEN---------GE 225 (270)
T ss_pred CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH-----------HHHHHHc---------CC
Confidence 123467999999988889999999999999999996 999986542110 0000110 11
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
....+...+..+.+++.+||..+|.+|||+.+++..|..+..
T Consensus 226 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 226 RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 112233455679999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=312.48 Aligned_cols=246 Identities=19% Similarity=0.237 Sum_probs=202.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+++.||+|+||.||++.... +++.+|||++...... ..+.+.+|+.+++.++||||+++++.+...+..++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKA---DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred ceEEEEecccCceEEEEEEEcC---CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEE
Confidence 3467788999999999999987 7888999998765322 2457899999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-CceeecccCccccCCCC-
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~~~~- 227 (527)
||+++++|.+++.......+++..+..++.+++.||.|||+++ ++|+||||+||+++.++ .+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 9999999999997544556899999999999999999999999 99999999999998654 58999999988655432
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.... ...+.. ..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-------------------~~~~~~-~~ 217 (256)
T cd08220 158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL-------------------VLKIMS-GT 217 (256)
T ss_pred ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH-------------------HHHHHh-cC
Confidence 34678899999999888899999999999999999999999864321100 001111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
....+...+..+.+++.+||..||.+|||+.+++.+
T Consensus 218 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 218 FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 112233456678999999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=315.23 Aligned_cols=244 Identities=19% Similarity=0.220 Sum_probs=197.2
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--C---hHHHHHHHHHhhcCCCCccceeEEEEEeC--Cee
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--D---PKQFADEAWGVGKLRHKRLANLIGYCCDG--DER 145 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 145 (527)
.+...||+|+||.||+|.+.. +++.||||.+...... . .+.+.+|+.++++++||||+++++++.+. ..+
T Consensus 5 ~~~~~l~~g~~g~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 5 RLGKLLGQGAFGRVYLCYDAD---TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred eEeeEEecCCceEEEEEEEcC---CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 356678999999999999987 7889999988643211 1 34688999999999999999999998763 467
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++||||+++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++.....
T Consensus 82 ~~v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLK--SYGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 89999999999999986 3356889999999999999999999999 99999999999999999999999999875432
Q ss_pred -------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 226 -------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 226 -------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
.....++..|+|||++.+..++.++|||||||++|||++|+.||...+... ...
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------------------~~~ 219 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-------------------AIF 219 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-------------------HHH
Confidence 223457889999999988889999999999999999999999985421100 011
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
...........+...+..+.+++.+||. +|++||++++++++-
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 220 KIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred HHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 1111112233455666778899999995 999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=319.68 Aligned_cols=259 Identities=19% Similarity=0.244 Sum_probs=196.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCC-----------CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGN-----------DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGY 138 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~-----------~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~ 138 (527)
.+.+.+.||+|+||.||+|...... .....||||.++..... ....|.+|++++++++|+||++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 3457788999999999999875421 12346999999765322 23569999999999999999999999
Q ss_pred EEeCCeeeEEEEecCCCCHhHHhhhcC----------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC
Q 009750 139 CCDGDERLLVAEYMPNDTLAKHLFHWE----------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE 208 (527)
Q Consensus 139 ~~~~~~~~lv~E~~~~g~L~~~l~~~~----------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~ 208 (527)
+...+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~ 164 (295)
T cd05097 86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGN 164 (295)
T ss_pred EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcC
Confidence 999999999999999999999985421 124788999999999999999999999 999999999999999
Q ss_pred CCCceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhC--CCCCCCCCccccccc
Q 009750 209 NGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG--KHIPPSHDMVVWNTV 280 (527)
Q Consensus 209 ~~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg--~~p~~~~~~~~~~~~ 280 (527)
++.+||+|||++....... ...++..|+|||++.++.++.++|||||||++|+|+++ ..||.......
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~---- 240 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ---- 240 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH----
Confidence 9999999999987643322 12335689999999888899999999999999999984 44554321100
Q ss_pred cccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 281 PIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...... ..............+...+..+.+|+.+||+.||.+|||+.+|++.|.
T Consensus 241 -------~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 -------VIENTG--EFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred -------HHHHHH--HhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 000000 000000000001112234567999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=319.56 Aligned_cols=259 Identities=16% Similarity=0.191 Sum_probs=201.3
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEE
Q 009750 59 LADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIG 137 (527)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~ 137 (527)
++.+...+++|. +++.||+|+||.||++.+.. +++.+|+|++.... .....+.+|+.+++.+ +||||+++++
T Consensus 10 ~~~~~~~~~~~~---~~~~lg~g~~~~vy~~~~~~---~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~ 82 (286)
T cd06638 10 FDSFPDPSDTWE---IIETIGKGTYGKVFKVLNKK---NGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYG 82 (286)
T ss_pred eecCCCccccee---eeeeeccCCCcEEEEEEECC---CCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeee
Confidence 344444555554 77888999999999999987 78889999886532 2246788999999999 7999999999
Q ss_pred EEE-----eCCeeeEEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 138 YCC-----DGDERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 138 ~~~-----~~~~~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
++. .++..++||||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~ 161 (286)
T cd06638 83 MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEG 161 (286)
T ss_pred eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCC
Confidence 884 345689999999999999987532 3456889999999999999999999998 99999999999999999
Q ss_pred CceeecccCccccCCC----CccccCCccCCcccccC-----CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc
Q 009750 211 DPRLSCFGLMKNSRDG----KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP 281 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~ 281 (527)
.+||+|||++...... ....+++.|+|||++.. ..++.++|||||||++|||++|+.||...+...
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~----- 236 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR----- 236 (286)
T ss_pred CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH-----
Confidence 9999999998764432 23467899999999853 447889999999999999999999986432110
Q ss_pred ccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 282 IKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
........ . ......+...+..+.+|+.+||+.||.+|||+.++++++.
T Consensus 237 ------~~~~~~~~-----~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 237 ------ALFKIPRN-----P--PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred ------HHhhcccc-----C--CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 00000000 0 0000112223456889999999999999999999998864
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=314.94 Aligned_cols=243 Identities=19% Similarity=0.264 Sum_probs=197.4
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC------hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD------PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
.+.+.||.|+||.||+|... +++.+|||.+....... ...+.+|++++++++|+||+++++++.+.+..+
T Consensus 3 ~~~~~ig~g~~~~v~~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 3 TKGEVLGKGAYGTVYCGLTN----QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred cccceEeccCCeEEEEEEEc----CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEE
Confidence 35567899999999999874 67789999987543211 245889999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC-
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~- 225 (527)
+||||+++++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 79 lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 79 IFMEFVPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999999996 3456899999999999999999999999 99999999999999999999999999865321
Q ss_pred ---------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 226 ---------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 226 ---------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
.....++..|+|||++.+..++.++|||||||++|+|++|..||...+.... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-----------~------- 217 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-----------M------- 217 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-----------H-------
Confidence 1234578899999999988899999999999999999999999864321100 0
Q ss_pred chhhccc-ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 297 ILHLMDS-HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 297 ~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..+... ......+...+..+.+++.+||+.+|.+||++.+++.+
T Consensus 218 -~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 218 -FYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred -HHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 01112233455678999999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=322.38 Aligned_cols=252 Identities=20% Similarity=0.294 Sum_probs=198.3
Q ss_pred ccccCCCCCCCeEEEEEecCCCC-CceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~-~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+++.||+|+||.||+|.+..... ....||+|.+....... ...+.+|+.+++.++||||+++++++... ..++++||
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~ 89 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQL 89 (303)
T ss_pred eccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehh
Confidence 56778999999999999865211 12357999887544322 34688999999999999999999998754 57799999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 90 ~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 167 (303)
T cd05110 90 MPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 167 (303)
T ss_pred cCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCcccccc
Confidence 999999999864 3446899999999999999999999999 9999999999999999999999999997654321
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...++..|+|||++.+..++.++|||||||++|||++ |+.||.+..... . ..++...
T Consensus 168 ~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~-----------~---------~~~~~~~ 227 (303)
T cd05110 168 ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-----------I---------PDLLEKG 227 (303)
T ss_pred cCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------H---------HHHHHCC
Confidence 1234678999999998889999999999999999998 888875432110 0 1111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
.....+...+..+.+++.+||..+|++||++.++++.|..+...
T Consensus 228 ~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 228 ERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11112223445788999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=313.89 Aligned_cols=242 Identities=19% Similarity=0.260 Sum_probs=195.1
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-----ChHHHHHHHHHhhcCCCCccceeEEEEEe--CCeee
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----DPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERL 146 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~ 146 (527)
+.+.||+|+||.||+|.+.. +++.||+|++...... ..+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 6 ~~~~lg~g~~g~vy~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 6 RGKLLGQGAFGRVYLCYDVD---TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred ccceecCCCCEEEEEEEEcC---CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 45667999999999999887 7889999998754321 12468899999999999999999999875 35688
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
++|||+++++|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 83 l~~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 83 IFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 9999999999999996 3456899999999999999999999998 999999999999999999999999998754321
Q ss_pred -------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 227 -------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 227 -------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
....++..|+|||++.+..++.++|||||||++|||++|+.||...+.. ..+..
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-------------------~~~~~ 220 (266)
T cd06651 160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-------------------AAIFK 220 (266)
T ss_pred cccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH-------------------HHHHH
Confidence 1245788999999999888999999999999999999999998542110 00111
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
+........++...+..+.+++ +||..+|++||++.+++.|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 221 IATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 1111112334455566777888 6888999999999999886
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=321.62 Aligned_cols=245 Identities=20% Similarity=0.281 Sum_probs=201.0
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
..||.|+||.||++.+.. +++.||||++........+.+.+|+.++..++||||+++++++..++..++||||++++
T Consensus 27 ~~ig~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 27 IKIGEGSTGIVCIAREKH---SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred hhcCCCCceeEEEEEEcC---CCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 367999999999999876 77889999997655555677999999999999999999999999999999999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Ccccc
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSYST 231 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~~~~ 231 (527)
+|..++. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ....+
T Consensus 104 ~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 179 (297)
T cd06659 104 ALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG 179 (297)
T ss_pred CHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceec
Confidence 9999884 356899999999999999999999999 999999999999999999999999998654322 23567
Q ss_pred CCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCH
Q 009750 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS 311 (527)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (527)
+..|+|||++.+..++.++|||||||++|||++|+.||...+... ......... .. ......
T Consensus 180 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----------~~~~~~~~~-----~~--~~~~~~ 241 (297)
T cd06659 180 TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-----------AMKRLRDSP-----PP--KLKNAH 241 (297)
T ss_pred CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHHHhccC-----CC--CccccC
Confidence 899999999988889999999999999999999999986432110 001111000 00 001112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 312 EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 312 ~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
..+..+.+++.+||+.+|.+||++.+++++-...
T Consensus 242 ~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~ 275 (297)
T cd06659 242 KISPVLRDFLERMLTREPQERATAQELLDHPFLL 275 (297)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhc
Confidence 2345688999999999999999999999975543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=319.93 Aligned_cols=249 Identities=19% Similarity=0.253 Sum_probs=203.2
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.++.||+|+||.||++.+.. ++..||||++....... .+.+.+|++++++++||||+++++++.+....++|||
T Consensus 29 ~~~~lg~G~~~~v~~~~~~~---~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 29 DLREIGHGSFGAVYFARDVR---TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhheeccCCCeEEEEEEEcC---CCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 46678999999999999887 78899999987543322 3468899999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCccc
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS 230 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 230 (527)
|+.+ +|.+++.. ....+++..+..++.+|+.||.|||+.+ ++||||+|+||+++.++.+||+|||++..........
T Consensus 106 ~~~g-~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (317)
T cd06635 106 YCLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFV 182 (317)
T ss_pred CCCC-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCccccc
Confidence 9975 78777753 3456899999999999999999999999 9999999999999999999999999988776666677
Q ss_pred cCCccCCccccc---CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 231 TNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 231 ~t~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
+++.|+|||++. .+.++.++|||||||++|||++|+.||...+... . ...+.......
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-----------~--------~~~~~~~~~~~ 243 (317)
T cd06635 183 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----------A--------LYHIAQNESPT 243 (317)
T ss_pred CCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-----------H--------HHHHHhccCCC
Confidence 899999999974 4568899999999999999999999975432110 0 00111111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
......+..+.+|+.+||+.+|.+||++.++++++.....
T Consensus 244 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 244 LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 1123345678999999999999999999999999877653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=311.83 Aligned_cols=248 Identities=27% Similarity=0.407 Sum_probs=200.4
Q ss_pred ccccCCCCCCCeEEEEEecCCC-CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~-~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+++.||.|+||.||++.+.... ..+..||+|+++..... ..+.+..|+.++..++|+||+++++++.+.+..+++|||
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence 5677899999999999998621 12488999999766543 456899999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc---
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS--- 228 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--- 228 (527)
+++++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (258)
T smart00219 83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKK 161 (258)
T ss_pred cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceeccccccccc
Confidence 99999999997533333899999999999999999999999 99999999999999999999999999876554321
Q ss_pred --cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 229 --YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 229 --~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
..+++.|+|||.+.+..++.++|||||||++++|++ |..||...+... ...... ...
T Consensus 162 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~-----------~~~~~~---------~~~ 221 (258)
T smart00219 162 KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE-----------VLEYLK---------KGY 221 (258)
T ss_pred ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------HHHHHh---------cCC
Confidence 225678999999988889999999999999999999 677765421100 001111 111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
....+...+..+.+++.+||..||++|||+.++++.|
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1122333567789999999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=315.79 Aligned_cols=252 Identities=20% Similarity=0.299 Sum_probs=199.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCC--CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
..++..||.|+||.||+|+.+... ...+.|++|.+...... ..+.+.+|+.++++++|+||+++++++.+....++|
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 86 (275)
T cd05046 7 LQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMI 86 (275)
T ss_pred ceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEE
Confidence 346778899999999999976421 14567999988765433 246799999999999999999999999998999999
Q ss_pred EEecCCCCHhHHhhhcCC-------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 149 AEYMPNDTLAKHLFHWEN-------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~-------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
|||+++|+|.+++..... ..+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++.
T Consensus 87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~~ 165 (275)
T cd05046 87 LEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLSK 165 (275)
T ss_pred EEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEccccccc
Confidence 999999999999974331 26899999999999999999999999 9999999999999999999999999986
Q ss_pred ccCCC-----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 222 NSRDG-----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 222 ~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
..... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||....... .......
T Consensus 166 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-----------~~~~~~~- 233 (275)
T cd05046 166 DVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-----------VLNRLQA- 233 (275)
T ss_pred ccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-----------HHHHHHc-
Confidence 53321 22345677999999988888999999999999999999 677774321100 0010110
Q ss_pred cchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.......+...+..+.+++.+||..+|.+|||+.+++..|.
T Consensus 234 -------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 -------GKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -------CCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 01111112234567889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-41 Score=320.34 Aligned_cols=250 Identities=26% Similarity=0.367 Sum_probs=200.3
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCCh--HHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~--~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+++.||+|+||+||++.... +++.||+|++........ ....+|+.++++++||||+++++++......++|||
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKK---NGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETT---TTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEE
T ss_pred EEeEEEEeCCCEEEEEEEECC---CCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccc
Confidence 467789999999999999998 788999999987653222 234569999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC----CC
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----DG 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~----~~ 226 (527)
|+++++|.+++. ....+++..++.++.||++||.+||+.+ ++|+||||+||++++++.++|+|||++.... ..
T Consensus 79 ~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~ 155 (260)
T PF00069_consen 79 YCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENF 155 (260)
T ss_dssp EETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEB
T ss_pred cccccccccccc--cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence 999999999997 4567899999999999999999999999 9999999999999999999999999987521 12
Q ss_pred CccccCCccCCccccc-CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 KSYSTNLAYTPPEYLR-NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~-~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....++..|+|||++. +..++.++||||+|+++|+|++|..||....... ............... ..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~-----------~~~~~~~~~~~~~~~-~~ 223 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD-----------QLEIIEKILKRPLPS-SS 223 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH-----------HHHHHHHHHHTHHHH-HT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchh-----------hhhhhhhcccccccc-cc
Confidence 3456788999999998 7889999999999999999999999986531000 000000000000000 00
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
. ........+.+++.+||+.||++|||+.+++++-
T Consensus 224 ~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~ 258 (260)
T PF00069_consen 224 Q--QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHP 258 (260)
T ss_dssp T--SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSG
T ss_pred c--ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCC
Confidence 0 0011126799999999999999999999999864
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=318.83 Aligned_cols=249 Identities=17% Similarity=0.262 Sum_probs=204.3
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+.+++.||.|+||.||++.... +++.||+|.+........+.+.+|+.+++.++||||+++++.+...+..++|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVA---TGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcC---CCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 345577889999999999999876 67889999987655445567999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 96 e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~ 171 (293)
T cd06647 96 EYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (293)
T ss_pred ecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceecccccccc
Confidence 9999999999995 345889999999999999999999999 9999999999999999999999999886544322
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc-ccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM-DSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 304 (527)
...+++.|++||.+.+..++.++|||||||++|+|++|+.||...+.... ...+. ...
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-------------------~~~~~~~~~ 232 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-------------------LYLIATNGT 232 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-------------------eeehhcCCC
Confidence 33577889999999888899999999999999999999999865422110 00000 000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.....+...+..+.+++.+||+.+|.+||++.+++.|-..
T Consensus 233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~ 272 (293)
T cd06647 233 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFL 272 (293)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence 0011123345678899999999999999999999998543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=314.15 Aligned_cols=246 Identities=19% Similarity=0.298 Sum_probs=200.1
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC------ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
....||+|++|.||++.+.. +++.||+|++...... ..+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~---~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 4 KGQQLGTGAFSSCYQARDVK---TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred ccceecCcCceEEEEEEEcC---CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 34567999999999999876 7889999998754321 13578999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-CceeecccCccccCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRDG 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~~~ 226 (527)
||||+++++|.+++. ....+++..++.++.||+.||.|||+++ ++|+||||+||+++.++ .+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 999999999999997 3457899999999999999999999999 99999999999998776 5999999998654332
Q ss_pred --------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 227 --------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 227 --------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
....++..|+|||.+.+..++.++||||+||++++|++|..||...+.... .. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----------~~-----~~~ 221 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-----------LA-----LIF 221 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-----------HH-----HHH
Confidence 123567899999999888899999999999999999999999854321100 00 000
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.+.........+...+..+.+++.+||..+|.+|||+.+++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 222 KIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 1111112233455667789999999999999999999999976
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=318.08 Aligned_cols=245 Identities=20% Similarity=0.256 Sum_probs=203.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||.|+||.||++.+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+...+++|
T Consensus 3 y~~~~~ig~g~~~~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 3 FEFIKTLGTGSFGRVMLVRHKG---SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred eEEEEEeecCCCeEEEEEEEcC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence 4577889999999999999987 788999999875432 2245789999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-C
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-K 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-~ 227 (527)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+|||++.++.+||+|||++...... .
T Consensus 80 ~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 156 (290)
T cd05580 80 MEYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTY 156 (290)
T ss_pred EecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCC
Confidence 999999999999973 467899999999999999999999999 999999999999999999999999998765443 3
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...+++.|+|||.+.+...+.++||||||+++|+|++|+.||...+... ... .+... ..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~~--------~~~~~--~~ 215 (290)
T cd05580 157 TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ-----------IYE--------KILEG--KV 215 (290)
T ss_pred CCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHH--------HHhcC--Cc
Confidence 4467889999999988888999999999999999999999986543100 000 01111 11
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLA 343 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~ 343 (527)
.++...+..+.+++.+||..||.+|+ ++.+++.|-.
T Consensus 216 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~ 256 (290)
T cd05580 216 RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPW 256 (290)
T ss_pred cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcc
Confidence 23334467788999999999999999 8888887744
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=320.58 Aligned_cols=264 Identities=19% Similarity=0.203 Sum_probs=197.0
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+++.||.|+||.||+|.+.. +|+.||+|+++..... ....+.+|+.++++++||||+++++++.+....++|+|
T Consensus 3 ~~~~~l~~g~~~~vy~~~~~~---~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 3 EKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred eeEEEecccCCeEEEEEEECC---CCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 356778999999999999987 7889999998754322 23568899999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+++ +|.+++.. ....+++..++.++.||++||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 80 ~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (284)
T cd07839 80 YCDQ-DLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCY 156 (284)
T ss_pred cCCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCc
Confidence 9975 78888754 3456899999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc-----chhhHHHHHhc-Ccchh
Q 009750 227 KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK-----FNFGALDMIRG-KNILH 299 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~ 299 (527)
....++..|+|||++.+.. ++.++|||||||++|||+||..|+............+. .....+..... .....
T Consensus 157 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07839 157 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKP 236 (284)
T ss_pred CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccc
Confidence 2335678999999987654 78999999999999999999988643322110000000 00000000000 00000
Q ss_pred h--cccccC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 300 L--MDSHLE-GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 300 ~--~~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
. ...... .......+..+.+|+.+||+.||.+|||+.+++.|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~ 282 (284)
T cd07839 237 YPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282 (284)
T ss_pred cCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence 0 000000 001123456788999999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=313.99 Aligned_cols=243 Identities=18% Similarity=0.275 Sum_probs=200.3
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
++..||.|+||.||+|.+.. +++.||||.+..... ...+.+.+|+.++++++||||+++++++..+...++||||+
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNR---TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hheeEeecCCeEEEEEEECC---CCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 56778999999999999876 778999999865432 22357889999999999999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Cc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~ 228 (527)
++++|.+++. ...+++..+..++.+++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06641 85 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhcc
Confidence 9999999984 356899999999999999999999999 999999999999999999999999998765432 23
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..++..|+|||.+.+..++.++|||||||++|+|++|..||....... ... .+.......
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-----------~~~---------~~~~~~~~~ 220 (277)
T cd06641 161 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK-----------VLF---------LIPKNNPPT 220 (277)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH-----------HHH---------HHhcCCCCC
Confidence 457888999999988889999999999999999999999885422100 000 001111112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+...+..+.+++.+||+.+|.+||++.+++.|-.
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 255 (277)
T cd06641 221 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 255 (277)
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence 23345567889999999999999999999999743
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=311.88 Aligned_cols=246 Identities=20% Similarity=0.260 Sum_probs=202.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEe--CCeeeE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLL 147 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~l 147 (527)
+.+++.||.|+||.||++.+.. +++.||+|.+....... .+++.+|+.++++++||||+++++++.. ....++
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKS---DGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecC---CCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEE
Confidence 3467888999999999999887 77889999987554322 3568899999999999999999998764 456899
Q ss_pred EEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhh-----hCCCccccccCCCceEeCCCCCceeecccCc
Q 009750 148 VAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCS-----SEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH-----~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
+|||+++++|.+++... ....+++..++.++.||+.||.||| +.+ ++|+||||+||+++.++.+||+|||++
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEeccccc
Confidence 99999999999999642 2467899999999999999999999 888 999999999999999999999999998
Q ss_pred cccCCCC----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 221 KNSRDGK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 221 ~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
....... ...+++.|+|||++.+..++.++||||||+++|+|++|+.||...+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------------------- 217 (265)
T cd08217 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ-------------------- 217 (265)
T ss_pred ccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH--------------------
Confidence 8765433 3467889999999998889999999999999999999999986542110
Q ss_pred chhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
....+........+...+..+.+++.+||+.+|.+||++.+|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 218 LASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 001111111123444566789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-39 Score=308.43 Aligned_cols=249 Identities=16% Similarity=0.223 Sum_probs=188.0
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
+||+|+||.||+|...... ....+++|.+..... ...+.+.+|+.+++.++||||+++++.|......++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDT-GVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCC-CcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 5799999999999865422 334577787765432 23467999999999999999999999999999999999999999
Q ss_pred CHhHHhhhcC--CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC------CC
Q 009750 156 TLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD------GK 227 (527)
Q Consensus 156 ~L~~~l~~~~--~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~------~~ 227 (527)
+|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 159 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED 159 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence 9999997432 234677788899999999999999998 99999999999999999999999999764221 22
Q ss_pred ccccCCccCCcccccC-------CcCCCCcccchhhHHHHHHHhC-CCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 228 SYSTNLAYTPPEYLRN-------GRVTPESVIFSFGTVLLDLLSG-KHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~-------~~~~~~~DvwslGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
...++..|+|||++.. ..++.++|||||||++|||+++ ..||...+... ............
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-----------~~~~~~~~~~~~ 228 (268)
T cd05086 160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-----------VLNHVIKDQQVK 228 (268)
T ss_pred CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-----------HHHHHHhhcccc
Confidence 3456789999999853 2357899999999999999975 55664322110 111111111111
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
+.+.. .+...+..+.+++..|| .+|.+||++.++++.|.
T Consensus 229 ~~~~~----~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 229 LFKPQ----LELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCc----cCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 12211 22224456788999999 67999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=317.35 Aligned_cols=258 Identities=17% Similarity=0.173 Sum_probs=201.9
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeE
Q 009750 58 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLI 136 (527)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~ 136 (527)
...++..++++|. ++..||.|+||.||++.... +++.+|+|++.... ...+.+.+|+.++.++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~---~~~~l~~g~~~~vy~~~~~~---~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~ 85 (291)
T cd06639 13 GLESLGDPTDTWE---IIETIGKGTYGKVYKVTNKK---DGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFY 85 (291)
T ss_pred hcccCCCCCCCeE---EEEEeecCCCeEEEEEEECC---CCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 3445555555555 66778999999999999987 78899999986543 2346788999999999 899999999
Q ss_pred EEEEeC-----CeeeEEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC
Q 009750 137 GYCCDG-----DERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (527)
Q Consensus 137 ~~~~~~-----~~~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~ 209 (527)
+++... +..++||||+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.+
T Consensus 86 ~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~ 164 (291)
T cd06639 86 GMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTE 164 (291)
T ss_pred EEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCC
Confidence 998754 3589999999999999988532 3456899999999999999999999998 9999999999999999
Q ss_pred CCceeecccCccccCCC----CccccCCccCCcccccCC-----cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc
Q 009750 210 GDPRLSCFGLMKNSRDG----KSYSTNLAYTPPEYLRNG-----RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV 280 (527)
Q Consensus 210 ~~~kl~DFG~a~~~~~~----~~~~~t~~y~aPE~~~~~-----~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~ 280 (527)
+.+||+|||++...... ....++..|+|||++... .++.++|||||||++|||++|+.||...+...
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~---- 240 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK---- 240 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH----
Confidence 99999999998764432 234578889999998643 26889999999999999999999986432110
Q ss_pred cccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 281 PIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
........... ....+...+..+.+||.+||+.+|++||++.++++|
T Consensus 241 -------~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 241 -------TLFKIPRNPPP-------TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred -------HHHHHhcCCCC-------CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00000000000 001122344578999999999999999999999987
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=356.21 Aligned_cols=243 Identities=21% Similarity=0.257 Sum_probs=205.4
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
.||.|.||.||.|.+.+ +|...|+|-++-.... ..+.+.+|..++..|+|||||+++|+-.+.+..+|.||||++
T Consensus 1242 ~Ig~G~fG~VYtavN~~---tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1242 FIGGGTFGKVYTAVNLD---TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred ccCCcceeeeEEeecCC---ccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhcc
Confidence 57999999999999998 8999999998754332 245788999999999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--------
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-------- 226 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-------- 226 (527)
|+|.+.+. ..+..++.....+..|++.||.|||+.| ||||||||+||+|+.+|.+|++|||.|......
T Consensus 1319 GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el 1395 (1509)
T KOG4645|consen 1319 GSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGEL 1395 (1509)
T ss_pred CcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHH
Confidence 99999997 3455777788889999999999999999 999999999999999999999999999865543
Q ss_pred CccccCCccCCcccccCCc---CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 KSYSTNLAYTPPEYLRNGR---VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
....||+.|||||++.+.. ...+.||||+|||+.||+||+.|+...|.. | .++--+..
T Consensus 1396 ~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~------------------aIMy~V~~ 1456 (1509)
T KOG4645|consen 1396 QSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-W------------------AIMYHVAA 1456 (1509)
T ss_pred HhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-h------------------HHHhHHhc
Confidence 2467999999999997644 567899999999999999999998543311 1 11111222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+.+|...+.+-.+++.+||+.||++|.++.++++|-..
T Consensus 1457 gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1457 GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcc
Confidence 33456777888999999999999999999999999988654
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=312.63 Aligned_cols=251 Identities=20% Similarity=0.296 Sum_probs=197.3
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCC------ee
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGD------ER 145 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~ 145 (527)
+.+.||+|+||.||+|.+.....+++.||||++...... ..+++.+|+.+++.++||||+++++++.... ..
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05074 3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP 82 (273)
T ss_pred chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence 456789999999999998754446789999999765322 2457899999999999999999999986542 24
Q ss_pred eEEEEecCCCCHhHHhhhc----CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 146 LLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
++++||+++|+|..++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~~ 161 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSK 161 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECcccccc
Confidence 7899999999999887532 1235789999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 222 NSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 222 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
...... ...+++.|++||.+.+..++.++|||||||++|||++ |++||...+... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~-----------~~~~~~~ 230 (273)
T cd05074 162 KIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE-----------IYNYLIK 230 (273)
T ss_pred cccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH-----------HHHHHHc
Confidence 654321 2234567999999988889999999999999999999 778775432110 0000000
Q ss_pred CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
. .....+...+..+.+++.+||+.+|.+||++.++++.|+.+
T Consensus 231 ~---------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 G---------NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred C---------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 01111223456789999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=277.20 Aligned_cols=259 Identities=21% Similarity=0.271 Sum_probs=204.1
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
.+.+||+|++|+||+|++.. +++.||+|+++.+.. .-.....+||-+|+.+.|.|||+++++...+..+-+|+||
T Consensus 6 kmekigegtygtvfkarn~~---t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFKARNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred HHHhhcCCcceeeEecccCC---ccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 56778999999999999998 889999999986543 3356899999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
|.. +|..+... -++.++.+.+++++.|+++||.|+|+++ ++||||||.|.|++.+|++||+|||+++..+-..
T Consensus 83 cdq-dlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 83 CDQ-DLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred hhH-HHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 965 88888754 5678999999999999999999999999 9999999999999999999999999998766442
Q ss_pred ccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhc---Ccchhhcc
Q 009750 228 SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRG---KNILHLMD 302 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 302 (527)
..+.|.+|.+|.++.|.. |++..|+||.|||+.|+.. |++.|++.+..+.. ...++....... ..+.++.+
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddql----krif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL----KRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHH----HHHHHHhCCCccccCCccccCCC
Confidence 335689999999998865 8999999999999999987 77778887644221 001111111111 11112212
Q ss_pred cccCCCCC---------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 303 SHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 303 ~~~~~~~~---------~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
...-+.++ +.....-.+|++++|.-+|.+|.+++++++|-
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhp 284 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHP 284 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCc
Confidence 11111122 12223457999999999999999999998874
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=341.29 Aligned_cols=266 Identities=15% Similarity=0.146 Sum_probs=187.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEE--------------cCcC---CCCChHHHHHHHHHhhcCCCCcc
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKK--------------FTKH---AWPDPKQFADEAWGVGKLRHKRL 132 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~--------------~~~~---~~~~~~~~~~E~~~l~~l~H~nI 132 (527)
..+.+++.||+|+||+||+|..+.. .+..+++|. +.+. .......+.+|+.+|++++||||
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRAS--TEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEecc--chhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4566889999999999999987542 222222221 1111 11123468899999999999999
Q ss_pred ceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcC---CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC
Q 009750 133 ANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE---NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (527)
Q Consensus 133 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~ 209 (527)
|++++++...+..++|+|++. ++|.+++.... ........++.|+.||+.||.|||+++ ||||||||+|||++.+
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~ 303 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCD 303 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCC
Confidence 999999999999999999995 47888775321 122345677889999999999999999 9999999999999999
Q ss_pred CCceeecccCccccCCC-----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc----
Q 009750 210 GDPRLSCFGLMKNSRDG-----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV---- 280 (527)
Q Consensus 210 ~~~kl~DFG~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~---- 280 (527)
+.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|..++...........
T Consensus 304 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 99999999999765432 235689999999999999999999999999999999999865433211100000
Q ss_pred -------cccchh---hHHHHHhcCcchhhcccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 281 -------PIKFNF---GALDMIRGKNILHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 281 -------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+.. ..+..+....+.. ....++ ...+..+.+++.+||+.||.+|||+.|++.|-..
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f 457 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDH-----AGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF 457 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhhhhccc-----CccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence 000000 0000000000000 000000 0123457789999999999999999999998654
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=310.20 Aligned_cols=244 Identities=23% Similarity=0.323 Sum_probs=199.7
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+.||+|+||.||+|.... +++.|+||.++..... ..+.+.+|+.+++.++|+||+++++++...+.+++|+|
T Consensus 3 ~~~~~lg~G~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 3 QRGNKIGGGTFGKVYTAVNLD---TGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred eeeeEeecCCCcEEEEEEECC---CCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 356778999999999999877 7788999998866543 35679999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++++|.+++. ....+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 80 YCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred cCCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 999999999997 3456889999999999999999999999 9999999999999999999999999987654322
Q ss_pred -----ccccCCccCCcccccCCc---CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 228 -----SYSTNLAYTPPEYLRNGR---VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
...+++.|+|||++.+.. ++.++||||||+++|+|++|+.||...+.. + .....
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~----------~~~~~------- 218 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-F----------QIMFH------- 218 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-H----------HHHHH-------
Confidence 234678999999998766 889999999999999999999998643211 0 00000
Q ss_pred hcccccCCCCCH--HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 300 LMDSHLEGNFSS--EEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 300 ~~~~~~~~~~~~--~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
+.......++. ..+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 219 -VGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred -HhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00011111222 235678899999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=312.89 Aligned_cols=248 Identities=21% Similarity=0.296 Sum_probs=197.1
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--C--------hHHHHHHHHHhhcCCCCccceeEEEEEeCC
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--D--------PKQFADEAWGVGKLRHKRLANLIGYCCDGD 143 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~--------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 143 (527)
+.+.||.|+||.||+|.... +++.||||.++..... . .+.+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 5 KGELIGKGTYGRVYLALNVT---TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ecceecccCceEEEEEeecC---CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 45678999999999999876 7889999988643211 1 235788999999999999999999999999
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 99999999999999999974 367899999999999999999999999 999999999999999999999999998764
Q ss_pred CCC------CccccCCccCCcccccCCc--CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 224 RDG------KSYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 224 ~~~------~~~~~t~~y~aPE~~~~~~--~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
... ....++..|+|||.+.... ++.++||||||+++|+|++|..||...+.... ..... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~----------~~~~~-~~ 227 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA----------MFKLG-NK 227 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH----------HHHhh-cc
Confidence 432 2235678999999987654 78999999999999999999999853321100 00000 00
Q ss_pred cchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.... ..........+..+.+++.+||..+|.+|||+.++++|-
T Consensus 228 ~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (272)
T cd06629 228 RSAP----PIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHP 270 (272)
T ss_pred ccCC----cCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCC
Confidence 0000 011111223456789999999999999999999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=313.34 Aligned_cols=243 Identities=19% Similarity=0.161 Sum_probs=192.9
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhc---CCCCccceeEEEEEeCCeeeEEEEe
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGK---LRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~---l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
||+|+||.||++.+.. +++.||||.+.+..... ...+.+|..+++. .+||||+.+++++...+..++||||
T Consensus 2 lg~G~~g~Vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 78 (279)
T cd05633 2 IGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDL 78 (279)
T ss_pred cccCCCeEEEEEEECC---CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEec
Confidence 6999999999999987 78899999987653221 2334555544443 4799999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--Ccc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KSY 229 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~ 229 (527)
+++|+|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++...... ...
T Consensus 79 ~~~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (279)
T cd05633 79 MNGGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (279)
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCc
Confidence 99999999986 4457999999999999999999999999 999999999999999999999999998754332 234
Q ss_pred ccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 230 STNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 230 ~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
.+|..|+|||.+.+ ..++.++|||||||++|||++|..||......... . . ... .......
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---------~---~-----~~~-~~~~~~~ 217 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---------E---I-----DRM-TLTVNVE 217 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH---------H---H-----HHH-hhcCCcC
Confidence 67899999999864 55899999999999999999999998654221100 0 0 000 0011122
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
.+...+..+.+++.+||..||++|| ++.++++|...
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~ 258 (279)
T cd05633 218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFF 258 (279)
T ss_pred CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccc
Confidence 3444567789999999999999999 69999998654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=317.98 Aligned_cols=246 Identities=20% Similarity=0.145 Sum_probs=196.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||.|+||.||++.... +++.||||.+...... ..+.+.+|+.+++.++||||+++++.+..++..++|
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 3 FETIKLISNGAYGAVYLVRHKE---TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred ceEeeEeecCCCeeEEEEEECC---CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence 3467788999999999999987 7889999998765422 234688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC---
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--- 225 (527)
|||++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 80 ~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 80 MEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred EecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 999999999999973 457899999999999999999999999 99999999999999999999999998863210
Q ss_pred ----------------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHH
Q 009750 226 ----------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 226 ----------------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
.....++..|+|||.+.+..++.++|+|||||++|||++|..||.+..... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-----------~~ 225 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-----------LF 225 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HH
Confidence 012346778999999988889999999999999999999999986532110 00
Q ss_pred HHHhcCcchhhcccccC-CCCCHHHHHHHHHHHHHhcccCCCCCCCH---HHHHHHh
Q 009750 290 DMIRGKNILHLMDSHLE-GNFSSEEATVVFDLASRCLQYEPRERPNT---KDLVSTL 342 (527)
Q Consensus 290 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rpt~---~~vl~~L 342 (527)
.. ....... .......+..+.+++.+||+.||++||++ .+++++-
T Consensus 226 ~~--------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 226 GQ--------VISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred HH--------HHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 00 0000000 00111345668899999999999999985 5555553
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=309.71 Aligned_cols=250 Identities=20% Similarity=0.296 Sum_probs=201.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+++.||.|+||+||+|.... ++..+|+|++..... .....+.+|+++++.++|+||+++++.+......++|||
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 3 YELIEVIGVGATAVVYAAICLP---NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred ceeeeeecCCCCeEEEEEEEcC---CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 3467788999999999999877 778899999875432 245679999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCC-CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 151 YMPNDTLAKHLFHWEN-QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
++++++|.+++..... ..+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 9999999999975332 56899999999999999999999999 9999999999999999999999999987544322
Q ss_pred ------ccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 228 ------SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
...++..|+|||++... .++.++|||||||++|+|++|+.||...+.... ...... ..
T Consensus 159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~----------~~~~~~-~~---- 223 (267)
T cd06610 159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV----------LMLTLQ-ND---- 223 (267)
T ss_pred cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh----------HHHHhc-CC----
Confidence 23578899999999877 689999999999999999999999854321100 000000 00
Q ss_pred cccccCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 301 MDSHLEGN-FSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 301 ~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
....... .....+..+.+++.+||..||.+|||+.+++.|
T Consensus 224 -~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 224 -PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred -CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0001100 012445778999999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=309.99 Aligned_cols=243 Identities=22% Similarity=0.278 Sum_probs=199.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-----ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+...||+|+||.||+|.... +++.|+||.+...... ..+.+.+|+.+++.++|+||+++++++.....+++|
T Consensus 4 ~~~~ig~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 4 KGELLGSGSFGSVYEGLNLD---DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred ccceeeecCCceEEEEEEcC---CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 34567999999999999986 7788999998754321 235789999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 81 LELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred EEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceecccccc
Confidence 999999999999973 456899999999999999999999999 999999999999999999999999998764433
Q ss_pred -CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....++..|++||.+.... ++.++|+|||||++|+|++|+.||........ .. .+....
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~----------~~---------~~~~~~ 218 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA----------VF---------KIGRSK 218 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH----------HH---------HHHhcc
Confidence 3456788999999997766 89999999999999999999999854321000 00 000000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.....+...+..+.+++.+||+.+|.+||++.+++.+
T Consensus 219 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 219 ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1112333456778899999999999999999999876
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=315.92 Aligned_cols=244 Identities=19% Similarity=0.285 Sum_probs=199.7
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
...||.|++|.||++.... +++.|+||++........+.+.+|+.+++.++||||+++++++...+..++|+||+++
T Consensus 24 ~~~lg~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKS---TGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred ceEeccCCCeEEEEEEECC---CCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 3467999999999999876 7788999998755444456789999999999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Cccc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSYS 230 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~~~ 230 (527)
++|.+++.. ..+++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....
T Consensus 101 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 176 (285)
T cd06648 101 GALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV 176 (285)
T ss_pred CCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence 999999963 56899999999999999999999999 999999999999999999999999987654332 2345
Q ss_pred cCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCC
Q 009750 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310 (527)
Q Consensus 231 ~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (527)
+++.|+|||.+.+..++.++|||||||++|||++|+.||...+... ........ ..... ..+
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~-----------~~~~~~~~-----~~~~~--~~~ 238 (285)
T cd06648 177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ-----------AMKRIRDN-----LPPKL--KNL 238 (285)
T ss_pred CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH-----------HHHHHHhc-----CCCCC--ccc
Confidence 7889999999988889999999999999999999999986432110 00111100 00000 011
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 311 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 311 ~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...+..+.+++.+||+.+|.+|||+.+++++-.
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (285)
T cd06648 239 HKVSPRLRSFLDRMLVRDPAQRATAAELLNHPF 271 (285)
T ss_pred ccCCHHHHHHHHHHcccChhhCcCHHHHccCcc
Confidence 224567899999999999999999999998643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=314.50 Aligned_cols=266 Identities=19% Similarity=0.281 Sum_probs=201.3
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+.+.||.|+||.||+|.+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++......++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRE---TGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred ceEEeecccCCCcEEEEEEECC---CCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEe
Confidence 3467788999999999999987 788899999976543 22467999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+ +++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 79 EYM-PSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred ccc-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 999 9999999864 3367999999999999999999999999 999999999999999999999999998765443
Q ss_pred --CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc-c---hhhHHHHHhc-Ccch
Q 009750 227 --KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK-F---NFGALDMIRG-KNIL 298 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~-~---~~~~~~~~~~-~~~~ 298 (527)
....++..|+|||.+.+.. ++.++|||||||++|||+||.++|.+............ . ....+..... ....
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYN 235 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhh
Confidence 2346788999999987644 68999999999999999999877765432110000000 0 0000000000 0000
Q ss_pred hhcccccC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 299 HLMDSHLE----GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 299 ~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+...... .......+..+.+|+.+||+.||.+|||+++++.|-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~ 284 (286)
T cd07832 236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284 (286)
T ss_pred cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcC
Confidence 00000000 0011123477899999999999999999999998743
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=314.56 Aligned_cols=266 Identities=20% Similarity=0.235 Sum_probs=196.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||.|++|.||+|..+. +++.||||.+...... ....+.+|+++++.++|+||+++++++......++||
T Consensus 6 ~y~~~~~lg~g~~~~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 6 TYKKLDKLGEGSYATVYKGRSKL---TGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred ceeEEEEEeecCCeEEEEEEEcC---CCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 45577889999999999999886 7788999998765322 2346788999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+.+ +|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~~-~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 159 (291)
T cd07844 83 EYLDT-DLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT 159 (291)
T ss_pred ecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence 99985 99998864 3347899999999999999999999999 999999999999999999999999998654321
Q ss_pred -CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc-----chhhHHHHH-hcCcch
Q 009750 227 -KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK-----FNFGALDMI-RGKNIL 298 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~ 298 (527)
....++..|+|||++.+ ..++.++|||||||++|+|++|+.||............+. .....+... ......
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 22345788999999876 4588999999999999999999999865431100000000 000000000 000000
Q ss_pred hh-----cccccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 299 HL-----MDSHLEGNFS-SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 299 ~~-----~~~~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.. ....+....+ ......+.+++.+||+.||.+|||+.+++.+-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~ 289 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHP 289 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCC
Confidence 00 0000000000 00125678999999999999999999998764
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=312.21 Aligned_cols=245 Identities=19% Similarity=0.241 Sum_probs=198.2
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
||.|+||+||+|.... +++.||+|.+..... .....+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 1 lg~g~~g~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (277)
T cd05577 1 LGKGGFGEVCACQVKA---TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNG 77 (277)
T ss_pred CCCCCceeEEEEEEcC---CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCC
Confidence 5899999999999887 788999999875432 2244678899999999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---Ccccc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KSYST 231 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---~~~~~ 231 (527)
++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++...... ....+
T Consensus 78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (277)
T cd05577 78 GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAG 156 (277)
T ss_pred CcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccC
Confidence 99999997544457999999999999999999999999 999999999999999999999999998764432 23456
Q ss_pred CCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCH
Q 009750 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS 311 (527)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (527)
+..|+|||++.+..++.++|||||||++|+|++|+.||........ ....... .. ......+.
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----------~~~~~~~----~~--~~~~~~~~ 219 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-----------KEELKRR----TL--EMAVEYPD 219 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-----------HHHHHhc----cc--cccccCCc
Confidence 7889999999888899999999999999999999999865421100 0000000 00 01112333
Q ss_pred HHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhc
Q 009750 312 EEATVVFDLASRCLQYEPRERP-----NTKDLVSTLA 343 (527)
Q Consensus 312 ~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~ 343 (527)
..++.+.+++.+||+.||.+|| ++.+++.|-+
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~ 256 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPL 256 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChh
Confidence 4467789999999999999999 7777887644
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=313.59 Aligned_cols=250 Identities=20% Similarity=0.244 Sum_probs=195.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHH-hhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWG-VGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+++.||+|+||.||++.+.. +|+.||||+++..... ...++..|+.+ ++.++||||+++++++...+..++||
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 3 LEVIEELGRGAYGVVDKMRHVP---TGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred ceEEEEecccCCeEEEEEEEcC---CCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 3467888999999999999987 7899999998765432 23456667765 56669999999999999999999999
Q ss_pred EecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 150 EYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
||++ |+|.+++... ....+++..++.++.||+.||.|||++ + ++||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9997 5888887642 335789999999999999999999997 7 999999999999999999999999998765432
Q ss_pred ---CccccCCccCCcccccC----CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 227 ---KSYSTNLAYTPPEYLRN----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~----~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
....++..|+|||++.+ ..++.++|+|||||++|+|++|+.||....... . ....
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-------------~-----~~~~ 219 (283)
T cd06617 158 VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-------------Q-----QLKQ 219 (283)
T ss_pred cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-------------H-----HHHH
Confidence 22457889999998865 346889999999999999999999985321100 0 0001
Q ss_pred hcccccCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 300 LMDSHLEGNFS-SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 300 ~~~~~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.... .....+ ...+..+.+++.+||..+|.+||++.+++++-...
T Consensus 220 ~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~ 265 (283)
T cd06617 220 VVEE-PSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFE 265 (283)
T ss_pred HHhc-CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhh
Confidence 1111 011111 23456789999999999999999999999875443
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=309.47 Aligned_cols=243 Identities=20% Similarity=0.224 Sum_probs=200.8
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
||.|++|.||+|.+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++.+.++...++||||+++
T Consensus 1 lg~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (262)
T cd05572 1 LGVGGFGRVELVKVKS---KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLG 77 (262)
T ss_pred CCCCCceEEEEEEECC---CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCC
Confidence 5999999999999987 7889999999765432 245799999999999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---Ccccc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KSYST 231 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---~~~~~ 231 (527)
++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ....+
T Consensus 78 ~~L~~~l~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~ 154 (262)
T cd05572 78 GELWTILR--DRGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCG 154 (262)
T ss_pred CcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccC
Confidence 99999997 3456899999999999999999999999 999999999999999999999999998865543 23467
Q ss_pred CCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCH
Q 009750 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS 311 (527)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (527)
+..|++||.+.+..++.++|+||||+++|+|++|..||...+... .. ....+........++.
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------------~~-----~~~~~~~~~~~~~~~~ 217 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP------------ME-----IYNDILKGNGKLEFPN 217 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH------------HH-----HHHHHhccCCCCCCCc
Confidence 889999999988889999999999999999999999986543100 00 0111111112223444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhc
Q 009750 312 EEATVVFDLASRCLQYEPRERPN-----TKDLVSTLA 343 (527)
Q Consensus 312 ~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~ 343 (527)
..+..+.+++.+||..||.+||+ +.++++|-+
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~ 254 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKW 254 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChh
Confidence 44678999999999999999999 888887643
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=324.81 Aligned_cols=244 Identities=22% Similarity=0.224 Sum_probs=205.8
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 68 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
.+..+.+...+|.|+|+.|-++.... +++..++|++.+.. .+..+|+.++... +||||+++.+++.++.+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~---t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSP---TDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccc---cccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceee
Confidence 35556667789999999999999988 78889999998762 3456678777666 8999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe-CCCCCceeecccCccccCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF-DENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll-~~~~~~kl~DFG~a~~~~~ 225 (527)
+|||++.|+-|.+.+. ....+. ..+..|+++|+.|+.|||++| ||||||||+|||+ ++.++++|+|||.++....
T Consensus 393 ~v~e~l~g~ell~ri~--~~~~~~-~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIR--SKPEFC-SEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred eeehhccccHHHHHHH--hcchhH-HHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 9999999998888775 333333 778889999999999999999 9999999999999 6999999999999987765
Q ss_pred C-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 226 G-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 226 ~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
. .+-+-|..|.|||++....|+.++||||||++||+||+|+.||..+... .++....
T Consensus 469 ~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----------------------~ei~~~i 526 (612)
T KOG0603|consen 469 SCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----------------------IEIHTRI 526 (612)
T ss_pred hhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----------------------HHHHHhh
Confidence 5 2335688999999999889999999999999999999999999765321 2333333
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..+.+....+..+++|+.+||+.||.+||++.+++.|-+.
T Consensus 527 ~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 527 QMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred cCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 4455567788899999999999999999999999998765
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=310.57 Aligned_cols=246 Identities=16% Similarity=0.207 Sum_probs=197.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCC------e
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGD------E 144 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~------~ 144 (527)
+.+++.||.|+||.||+|.+.. +++.+++|++..... ..+++.+|+.+++++ .|+||+++++++.... .
T Consensus 8 y~~~~~l~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 8 FELVEVIGEGTYGKVYKARHKK---TGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred eeheeeecCCCCeEEEEEEECC---CCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 3467888999999999999986 678899999876542 346799999999999 7999999999997654 4
Q ss_pred eeEEEEecCCCCHhHHhhhcC--CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 145 RLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
+++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 162 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQ 162 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCcccee
Confidence 899999999999999986433 467899999999999999999999999 99999999999999999999999999875
Q ss_pred cCCC----CccccCCccCCcccccC-----CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 223 SRDG----KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 223 ~~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
.... ....++..|+|||++.. ..++.++|||||||++|+|++|+.||.......
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----------------- 225 (275)
T cd06608 163 LDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR----------------- 225 (275)
T ss_pred cccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-----------------
Confidence 4332 23457889999998854 246789999999999999999999985421110
Q ss_pred cCcchhhccccc-CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 294 GKNILHLMDSHL-EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 294 ~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
....+..... ....+...+..+.+|+.+||..||++|||+.+++++
T Consensus 226 --~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 226 --ALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred --HHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0001111100 111123356678999999999999999999999876
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=314.67 Aligned_cols=257 Identities=20% Similarity=0.248 Sum_probs=198.5
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.++..||.|++|.||+|.+.. +++.||||+++..... ..+.+.+|++++++++||||+++++++.+....++|||
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 3 QKVEKIGEGTYGVVYKARNKL---TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred eeeeeecCCCceEEEEEEECC---CCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 367788999999999999987 7889999998754322 23578999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+. ++|..++.......+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 157 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 157 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc
Confidence 996 58999887555677899999999999999999999999 999999999999999999999999998754432
Q ss_pred CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC----------
Q 009750 227 KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK---------- 295 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 295 (527)
....++..|+|||++.+.. ++.++|||||||++|||+||+.||...+...... .........
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-------RIFRTLGTPDEVVWPGVTS 230 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-------HHHHHhCCCChhhhhhhhH
Confidence 2234578899999987654 6889999999999999999999987654211000 000000000
Q ss_pred --cchhhcccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 296 --NILHLMDSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 296 --~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.....+...... ......+..+.++|.+||+.||.+|||+.+++.|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 231 LPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000000000 0011234567899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=311.76 Aligned_cols=245 Identities=22% Similarity=0.247 Sum_probs=202.8
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+.||.|+||.||+|.+.. +++.||+|++.+.... ..+.+.+|+.++++++||||+++++.+......++||
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 3 ELLRVIGKGAFGKVCIVQKRD---TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred eEEEEeccCCCceEEEEEEcc---CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 467788999999999999987 7888999999765422 3467999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++++|.+++.. ...+++..+..++.||++||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 80 e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 156 (258)
T cd05578 80 DLLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLT 156 (258)
T ss_pred eCCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccc
Confidence 99999999999963 367899999999999999999999999 999999999999999999999999998765543
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
....++..|+|||++.+..++.++|+||||+++|+|++|+.||...+.... ... ...... ..
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------------~~~-----~~~~~~-~~ 218 (258)
T cd05578 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR------------DQI-----RAKQET-AD 218 (258)
T ss_pred cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH------------HHH-----HHHhcc-cc
Confidence 234577889999999888899999999999999999999999865432100 000 000110 11
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCH--HHHHHH
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNT--KDLVST 341 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~--~~vl~~ 341 (527)
...+...+..+.+++.+||..||.+||++ .+++.+
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence 23344456788999999999999999999 777654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=314.05 Aligned_cols=266 Identities=20% Similarity=0.230 Sum_probs=199.8
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeC--Cee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG--DER 145 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 145 (527)
..+.++..||.|+||.||+|.+.. +++.||||.++...... ...+.+|+.++++++||||+++++++... ...
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKK---TGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECC---CCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcE
Confidence 345577888999999999999987 78899999997554322 34578899999999999999999999877 889
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++||||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++.....
T Consensus 82 ~lv~e~~~~-~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 82 YMVMEYVEH-DLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred EEEehhcCc-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 999999975 99998864 2346899999999999999999999999 99999999999999999999999999876544
Q ss_pred C----CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHH----
Q 009750 226 G----KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMI---- 292 (527)
Q Consensus 226 ~----~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~---- 292 (527)
. ....+++.|+|||.+.+.. ++.++|+|||||++|||++|..||...+.......... .....+..+
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 3 2345678899999987654 68999999999999999999999865432100000000 000000000
Q ss_pred --hcCcchhhcccccCCCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 293 --RGKNILHLMDSHLEGNFSSE-EATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 293 --~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
............+...++.. .+..+.+||.+||+.||++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000011111222222 36678899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=316.75 Aligned_cols=265 Identities=19% Similarity=0.285 Sum_probs=199.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+++.||.|+||.||+|.+.. +++.||+|++...... ..+.+.+|+++++.++||||+++++++...+..++||
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 3 YENLGLVGEGSYGMVMKCKHKE---TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred eeEeeeeccCCCeEEEEEEECC---CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 3467888999999999999987 7889999998754322 2457889999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++++|..+.. ....+++..++.++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07846 80 EFVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 156 (286)
T ss_pred ecCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccc
Confidence 9999999988775 3445899999999999999999999999 999999999999999999999999998764332
Q ss_pred -CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHHHhcCcchh-
Q 009750 227 -KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDMIRGKNILH- 299 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~- 299 (527)
....++..|+|||++.+. .++.++|||||||++|||++|++||+..+......... ..............+..
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07846 157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAG 236 (286)
T ss_pred cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhc
Confidence 234568899999998764 47889999999999999999998886543211000000 00000000000000000
Q ss_pred hcccccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 300 LMDSHLEG-----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 300 ~~~~~~~~-----~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
........ ......+..+.+|+.+||+.+|.+||++.+++++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 284 (286)
T cd07846 237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHE 284 (286)
T ss_pred cccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCC
Confidence 00000000 00123456789999999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=310.99 Aligned_cols=251 Identities=21% Similarity=0.268 Sum_probs=203.5
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
.+++.||.|+||.||++.+.. +++.||+|++...... ..+++.+|++++++++||||+++++++......++|+||
T Consensus 4 ~~~~~ig~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 4 EYLGELGAGNSGVVSKVLHRP---TGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred hHHHHhcCCCCeEEEEEEEcC---CCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 356778999999999999987 7889999998765432 345789999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEeCCCCCceeecccCccccCCC--Cc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KS 228 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~ 228 (527)
+++++|.+++... ...+++..+..++.|++.||.|||+ .+ ++|+||||+||++++++.+||+|||.+...... ..
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 158 (265)
T cd06605 81 MDGGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT 158 (265)
T ss_pred cCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc
Confidence 9999999999742 2678999999999999999999999 88 999999999999999999999999998654322 22
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
..++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.... . .... ...+... ....
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~------~---~~~~-----~~~~~~~-~~~~ 223 (265)
T cd06605 159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD------G---IFEL-----LQYIVNE-PPPR 223 (265)
T ss_pred ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc------c---HHHH-----HHHHhcC-CCCC
Confidence 5678899999999988999999999999999999999999864321100 0 0000 0011111 1111
Q ss_pred CCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 309 FSSE-EATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~-~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+.. .+..+.++|.+||..||.+|||+.+++.+-+
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 259 (265)
T cd06605 224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPF 259 (265)
T ss_pred CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCch
Confidence 2222 5677899999999999999999999998744
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=315.74 Aligned_cols=272 Identities=19% Similarity=0.200 Sum_probs=200.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeC--C
Q 009750 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG--D 143 (527)
Q Consensus 68 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~ 143 (527)
+.+.+.+++.||.|+||.||+|.+.. +++.||+|+++...... ...+.+|+.++++++|+||+++++++... +
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTT---SGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLD 81 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECC---CCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCC
Confidence 34456678889999999999999987 78899999987543222 33577899999999999999999998765 4
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
..++||||+.+ +|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...
T Consensus 82 ~~~lv~e~~~~-~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 82 SIFLVMEYCEQ-DLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred eEEEEEecCCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeec
Confidence 68999999975 89888864 2467899999999999999999999999 999999999999999999999999998765
Q ss_pred CCC----CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHhc
Q 009750 224 RDG----KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIRG 294 (527)
Q Consensus 224 ~~~----~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~ 294 (527)
... ....++..|+|||++.+ ..++.++|||||||++|||++|++||...+.......... .....+.....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence 432 12244778999999876 4578999999999999999999999875432210000000 00000000000
Q ss_pred Cc---chhhcccccCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 295 KN---ILHLMDSHLEG--NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 295 ~~---~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.. ...+....... ......++.+.+||.+||+.||++|||+.+++.|-+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~ 294 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 00 00000000000 00011356788999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=324.77 Aligned_cols=239 Identities=17% Similarity=0.211 Sum_probs=197.1
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC----CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCe--eeEEE
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA----WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE--RLLVA 149 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~~lv~ 149 (527)
..||+|+|-+||+|.+.. +|..||--.++... ....++|..|+.+|+.|+|||||+++..+.+... +.+|+
T Consensus 46 evLGrGafKtVYka~De~---~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEE---EGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred hhcccccceeeeeccccc---cchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 357999999999999987 88888854443221 1224789999999999999999999999987655 88999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC-CccccccCCCceEeCC-CCCceeecccCccccCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDE-NGDPRLSCFGLMKNSRD-- 225 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~~-- 225 (527)
|.+..|+|..+++ +.+.++...++.|++||++||.|||++. +|||||||-+||+|+. .|.|||+|+|||.....
T Consensus 123 EL~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 123 ELFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred ecccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 9999999999998 5677889999999999999999999998 7999999999999975 58999999999987654
Q ss_pred CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 226 GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 226 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
..+.+|||.|||||+.. ..|+..+||||||+.++||+|+..|+... .+..+|.....
T Consensus 201 aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC----------------------~n~AQIYKKV~ 257 (632)
T KOG0584|consen 201 AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC----------------------TNPAQIYKKVT 257 (632)
T ss_pred cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh----------------------CCHHHHHHHHH
Confidence 35679999999999996 78999999999999999999999997533 22222222222
Q ss_pred CCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 306 EGNFS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 306 ~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+..| .-..+++.+||.+||.. .++|||+.|+|.+-.
T Consensus 258 SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~F 298 (632)
T KOG0584|consen 258 SGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPF 298 (632)
T ss_pred cCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChh
Confidence 22222 22347799999999999 999999999998744
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=308.17 Aligned_cols=246 Identities=22% Similarity=0.301 Sum_probs=204.4
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
.+++.||.|++|.||+|.+.. +++.|+||++..... ...+.+.+|+.++.+++|+||+++++++......++||||
T Consensus 4 ~~~~~i~~g~~~~v~~~~~~~---~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 4 ERVKVLGQGSSGVVYKVRHKP---TGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred eeeeeeeecCCeEEEEEEEcC---CCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 466788999999999999987 788999999887654 2356799999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
+++++|.+++.. ...+++..++.++.||++||.|||+ .+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 157 (264)
T cd06623 81 MDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC 157 (264)
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence 999999999973 3678999999999999999999999 98 9999999999999999999999999987654332
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
...++..|+|||.+.+..++.++||||||+++|+|+||+.||...+...+ ... ...+.. ...
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-----------~~~-----~~~~~~-~~~ 220 (264)
T cd06623 158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF-----------FEL-----MQAICD-GPP 220 (264)
T ss_pred cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCH-----------HHH-----HHHHhc-CCC
Confidence 33567899999999988899999999999999999999999865431000 000 001111 111
Q ss_pred CCCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 307 GNFSSE-EATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 307 ~~~~~~-~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
...+.. .+..+.+++.+||..+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 122333 56779999999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=310.39 Aligned_cols=244 Identities=18% Similarity=0.272 Sum_probs=199.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCC---CCccceeEEEEEeCCeeeEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLR---HKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lv~ 149 (527)
++..||.|+||.||+|.+.. +++.||||.++.... ...+++.+|+.+++.++ ||||+++++++..+...++||
T Consensus 5 ~~~~l~~g~~g~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 5 RLELIGRGAYGAVYRGKHVP---TGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhheeccCCceEEEEEEcC---CCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 56778999999999999977 788999999876532 33567899999999996 999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++++|.+++.. ..+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06917 82 EYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK 157 (277)
T ss_pred ecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence 99999999999853 47899999999999999999999999 999999999999999999999999998765433
Q ss_pred -CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 -KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....++..|+|||.+.++ .++.++|||||||++|+|++|..||...+.... ...+ ...
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-------------------~~~~-~~~ 217 (277)
T cd06917 158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-------------------MMLI-PKS 217 (277)
T ss_pred cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-------------------hhcc-ccC
Confidence 234678889999998754 478999999999999999999999865321110 0000 000
Q ss_pred cCCCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 305 LEGNFSS-EEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 305 ~~~~~~~-~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....++. ..+..+.+++.+||+.||.+||++.+++.+-+.
T Consensus 218 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~ 258 (277)
T cd06917 218 KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWI 258 (277)
T ss_pred CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHh
Confidence 0011111 145678899999999999999999999987543
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=308.71 Aligned_cols=254 Identities=16% Similarity=0.158 Sum_probs=197.6
Q ss_pred HHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEE
Q 009750 60 ADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGY 138 (527)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~ 138 (527)
.++....++|.....++ +|.|+||.||++..+. +++.+|+|.+........ |+.....+ +||||+++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~ 77 (267)
T PHA03390 7 SELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKP---TQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHhhcccccee-ecCCCceEEEEEEEcC---CCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEE
Confidence 33444444444332222 5999999999999987 788899999875432211 22222223 79999999999
Q ss_pred EEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-Cceeecc
Q 009750 139 CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCF 217 (527)
Q Consensus 139 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-~~kl~DF 217 (527)
+...+..++||||+++++|.+++.. ...+++..+..++.||++||.|||+.+ ++||||||+||+++.++ .++|+||
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 78 VTTLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred EecCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecC
Confidence 9999999999999999999999973 348999999999999999999999999 99999999999999998 9999999
Q ss_pred cCccccCCCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 218 GLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 218 G~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
|++..........++..|+|||++.+..++.++|||||||++|||++|+.||........ ....+
T Consensus 155 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~----------~~~~~----- 219 (267)
T PHA03390 155 GLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL----------DLESL----- 219 (267)
T ss_pred ccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh----------hHHHH-----
Confidence 999877666667789999999999988899999999999999999999999864321110 00000
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHh
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN-TKDLVSTL 342 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-~~~vl~~L 342 (527)
..... .....+...+..+.+++.+||+.||.+||+ ++++++|=
T Consensus 220 ~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~ 263 (267)
T PHA03390 220 LKRQQ--KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHP 263 (267)
T ss_pred HHhhc--ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCC
Confidence 00000 011223356678999999999999999996 69998763
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-39 Score=310.68 Aligned_cols=248 Identities=19% Similarity=0.261 Sum_probs=202.9
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.+...+|.|++|.||+|.+.. +++.|++|++..... ..+.+.+|+++++.++|+||+++++.+......++|+||+
T Consensus 22 ~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 97 (286)
T cd06614 22 KNLEKIGEGASGEVYKATDRA---TGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYM 97 (286)
T ss_pred hHhHhccCCCCeEEEEEEEcc---CCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEecc
Confidence 355678999999999999986 678899999976543 4567999999999999999999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Cc
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KS 228 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~ 228 (527)
++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 98 ~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 175 (286)
T cd06614 98 DGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS 175 (286)
T ss_pred CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhcc
Confidence 9999999997522 37999999999999999999999999 999999999999999999999999987654432 23
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC-C
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE-G 307 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 307 (527)
..++..|++||++.+..++.++|||||||++|+|++|+.||...+... ... .+...... .
T Consensus 176 ~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-----------~~~--------~~~~~~~~~~ 236 (286)
T cd06614 176 VVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-----------ALF--------LITTKGIPPL 236 (286)
T ss_pred ccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-----------HHH--------HHHhcCCCCC
Confidence 456788999999988889999999999999999999999875432110 000 00000000 1
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
..+...+..+.+++.+||+.+|.+|||+.+++.+....
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 274 (286)
T cd06614 237 KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLK 274 (286)
T ss_pred cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhh
Confidence 11222456789999999999999999999999875543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=308.07 Aligned_cols=245 Identities=18% Similarity=0.276 Sum_probs=200.7
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+.||.|+||.||+|.... ++..||+|.+..... ...+.+.+|+.+++.++|+||+++++.+......++|+||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 4 IIKKIGEGSFGKIYLAKAKS---DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred EEEEecCCCcceEEEEEEcC---CCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 56678999999999999987 778899999876432 2345788999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC-ceeecccCccccCCCC---
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD-PRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~-~kl~DFG~a~~~~~~~--- 227 (527)
+++++|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+||++++++. +||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 99999999997544456899999999999999999999999 999999999999998864 6999999987654432
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
...+++.|+|||++.+..++.++|||||||++|||++|..||...+... ....+.....
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------------------~~~~~~~~~~- 219 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ-------------------LVLKICQGYF- 219 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-------------------HHHHHhcccC-
Confidence 2357888999999988889999999999999999999999985432110 0011111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
...+...+..+.+++.+||..+|++|||+.+++++-
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~ 255 (257)
T cd08225 220 APISPNFSRDLRSLISQLFKVSPRDRPSITSILKRP 255 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCC
Confidence 112223456788999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=312.96 Aligned_cols=264 Identities=21% Similarity=0.286 Sum_probs=200.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+++.||+|+||.||+|.+.. +++.||||+++.... ...+.+.+|++++++++|+||+++++++...+..++||
T Consensus 3 y~~~~~i~~g~~~~v~~~~~~~---~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 3 YEVLGVVGEGAYGVVLKCRNKA---TGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred eeEEEEecccCCeeEEEEEeCC---CCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 4467788999999999999987 778899999875432 23467999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||++++.|..++. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 80 EYVERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred ecCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccc
Confidence 9999877766654 3456899999999999999999999999 9999999999999999999999999987654432
Q ss_pred ---ccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHh-cCcch
Q 009750 228 ---SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIR-GKNIL 298 (527)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~ 298 (527)
...++..|+|||++.+. .++.++||||||+++|+|++|+.||.+............ ........+. .....
T Consensus 157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07833 157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA 236 (288)
T ss_pred cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccc
Confidence 34567889999999888 789999999999999999999998875432110000000 0000000000 00000
Q ss_pred -----hhccc-ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 299 -----HLMDS-HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 299 -----~~~~~-~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..... .....++...+..+.+||.+||..+|.+|||+++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 00001222346779999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=314.33 Aligned_cols=250 Identities=20% Similarity=0.248 Sum_probs=195.6
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
.++.||+|+||.||++.+.. +++.||||.+...... ....+.+|+.++.++. |+||+++++++......+++|||
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKP---SGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HHHHhCCCCceEEEEEEECC---CCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 45678999999999999987 7899999998765432 2456899999999995 99999999999999999999999
Q ss_pred cCCCCHhHHh---hhcCCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 152 MPNDTLAKHL---FHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 152 ~~~g~L~~~l---~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
+.. +|.++. .......+++..+..++.+++.||+|||+. + ++||||||+|||++.++.+||+|||++......
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 864 555543 222346799999999999999999999985 7 999999999999999999999999998754332
Q ss_pred --CccccCCccCCcccccCC---cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 227 --KSYSTNLAYTPPEYLRNG---RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~---~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
....+++.|+|||++.+. .++.++|||||||++|||++|+.||...... ...... .....
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------------~~~~~~--~~~~~ 227 (288)
T cd06616 163 AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV-------------FDQLTQ--VVKGD 227 (288)
T ss_pred ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchH-------------HHHHhh--hcCCC
Confidence 234678899999999776 6899999999999999999999998643200 000000 00000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...+....+...+..+.+|+.+||+.||.+|||+.+++.+-.
T Consensus 228 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~ 269 (288)
T cd06616 228 PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPF 269 (288)
T ss_pred CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 011111122335667899999999999999999999998744
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=307.98 Aligned_cols=249 Identities=18% Similarity=0.273 Sum_probs=198.0
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC----------CChHHHHHHHHHhhc-CCCCccceeEEEEEe
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----------PDPKQFADEAWGVGK-LRHKRLANLIGYCCD 141 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~----------~~~~~~~~E~~~l~~-l~H~nIv~l~~~~~~ 141 (527)
.+++.||.|+||.||+|.+..+ .++.+|||.+..... ....++.+|+.++.+ ++||||+++++++..
T Consensus 3 ~~~~~ig~G~~~~v~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 3 AVLEHLGSGAFGCVYKVRKKNN--GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred hhhhhhcCCCCceEEEEEEcCC--CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 3567789999999999998753 457899998864321 123457789988875 699999999999999
Q ss_pred CCeeeEEEEecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEeCCCCCceeeccc
Q 009750 142 GDERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
++..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||+|+|||++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEeccc
Confidence 9999999999999999998853 134568999999999999999999996 56 9999999999999999999999999
Q ss_pred CccccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 219 LMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 219 ~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
++...... ....++..|++||.+.+..++.++||||||+++|||++|+.||...+... ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~-----------~~~----- 223 (269)
T cd08528 160 LAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS-----------LAT----- 223 (269)
T ss_pred ceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH-----------HHH-----
Confidence 98765543 24467889999999998889999999999999999999999875432110 000
Q ss_pred cchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+.............+..+.+++.+||+.||.+||++.++..++.
T Consensus 224 ---~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 224 ---KIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ---HHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 011111111111133567889999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=316.64 Aligned_cols=243 Identities=22% Similarity=0.231 Sum_probs=206.2
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
.||.|-||+||-|..+. +|+.||||++.+..... ..++.+|+.||.++.||.||.+--.|+..+.+++|||-+.
T Consensus 571 vLGSGQFG~VYgg~hRk---tGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~- 646 (888)
T KOG4236|consen 571 VLGSGQFGTVYGGKHRK---TGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH- 646 (888)
T ss_pred hccCCcceeeecceecc---cCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-
Confidence 57999999999999998 99999999998765433 4679999999999999999999999999999999999995
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC---CceeecccCccccCCC---Cc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGLMKNSRDG---KS 228 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~---~~kl~DFG~a~~~~~~---~~ 228 (527)
|++.+.+.....+++++.....++.||+.||.|||.++ |+|+||||+||||.+.. .+||||||+|+...+. .+
T Consensus 647 GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrs 725 (888)
T KOG4236|consen 647 GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRS 725 (888)
T ss_pred chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhh
Confidence 57777776668899999999999999999999999999 99999999999996543 6999999999998876 36
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
.+|||.|+|||++.+..|+..-|+||+|||+|.-|+|..||..+.+... .+.+..++ ....
T Consensus 726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdInd-------------QIQNAaFM------yPp~ 786 (888)
T KOG4236|consen 726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIND-------------QIQNAAFM------YPPN 786 (888)
T ss_pred hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhH-------------Hhhccccc------cCCC
Confidence 7899999999999999999999999999999999999999865432110 01111111 1122
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...+.+..+++||..+|+..-.+|.|.+..+.|.+
T Consensus 787 PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 787 PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence 23566788999999999999999999999988765
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=314.55 Aligned_cols=264 Identities=19% Similarity=0.169 Sum_probs=198.3
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-----ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+++.||.|+||.||+|.+.. +++.||||+++..... ....+..|+++++.++|+||+++++++.+....++|
T Consensus 4 ~~~~lg~g~~~~vy~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 4 KGKKLGEGTYAVVYKARDKE---TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred eeeeeeeccccEEEEEEECC---CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 56678999999999999887 7889999999865433 134578899999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+ +|+|.+++.... ..+++..++.++.||++||.|||+++ ++|+||||+|||++.++.+||+|||++......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 9999 889999996422 37999999999999999999999999 999999999999999999999999998765433
Q ss_pred --CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc-chhhHHHHH-hcCcchhhc
Q 009750 227 --KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK-FNFGALDMI-RGKNILHLM 301 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~ 301 (527)
....+++.|+|||.+.+ ..++.++|||||||++|||++|.++|...+.......... ........+ .........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence 22345778999999865 4578899999999999999999877765432110000000 000000000 000000000
Q ss_pred ccccCCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 302 DSHLEGN-----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 302 ~~~~~~~-----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
....... .....+..+.++|.+||+.||.+|||+.+++.+-+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~ 284 (298)
T cd07841 238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284 (298)
T ss_pred cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcc
Confidence 0000001 11234567889999999999999999999999743
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-39 Score=312.06 Aligned_cols=243 Identities=19% Similarity=0.293 Sum_probs=198.5
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
..||+|+||.||++.... +++.||||++........+.+.+|+.+++.++|+||+++++.+...+..++||||++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 26 IKIGEGSTGIVCIATVKS---SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHcCCCCCeEEEEEEEcC---CCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 457999999999999987 78899999986554444567999999999999999999999999999999999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Ccccc
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSYST 231 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~~~~ 231 (527)
+|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....+
T Consensus 103 ~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 178 (292)
T cd06657 103 ALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG 178 (292)
T ss_pred cHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceeccccccccccccc
Confidence 9999884 346899999999999999999999999 999999999999999999999999987654332 23457
Q ss_pred CCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCH
Q 009750 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS 311 (527)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (527)
++.|++||.+.+..++.++|+|||||++|+|++|..||.+.+... ...... ......+. ...
T Consensus 179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~-----------~~~~~~-----~~~~~~~~--~~~ 240 (292)
T cd06657 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----------AMKMIR-----DNLPPKLK--NLH 240 (292)
T ss_pred CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHHHH-----hhCCcccC--Ccc
Confidence 889999999988888999999999999999999999986532110 000010 00011110 112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 312 EEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 312 ~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..+..+.+++.+||+.||.+||++.+++.+=.
T Consensus 241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~ 272 (292)
T cd06657 241 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 272 (292)
T ss_pred cCCHHHHHHHHHHHhCCcccCcCHHHHhcChH
Confidence 34556889999999999999999999998733
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=305.05 Aligned_cols=267 Identities=15% Similarity=0.124 Sum_probs=206.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCC--C----ccceeEEEEEeCCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH--K----RLANLIGYCCDGDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H--~----nIv~l~~~~~~~~~~ 145 (527)
+.+++.+|+|+||.|-.+.+.. ++..||||+++.-.. -.+..+-|+++|.+|.+ | .+|++.++|...++.
T Consensus 91 y~i~~~lGeGtFGkV~ec~D~~---~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 91 YEIVDLLGEGTFGKVVECWDRE---TKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred eehhhhhcCCcccceEEEeecC---CCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 5578889999999999999988 688999999976542 23567789999999932 3 388999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-----------------
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE----------------- 208 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~----------------- 208 (527)
|||+|.+ |-+++++|..+.-.+++...++.++.|+++++.|||+.+ ++|.||||+|||+.+
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r 244 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIR 244 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceec
Confidence 9999999 669999999877788999999999999999999999999 999999999999942
Q ss_pred ---CCCceeecccCccccCCC-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc----
Q 009750 209 ---NGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV---- 280 (527)
Q Consensus 209 ---~~~~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~---- 280 (527)
+..+||+|||.|....+. .+.+.|..|+|||++++..++..+||||+||||+|++||...|++++..++...
T Consensus 245 ~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI 324 (415)
T KOG0671|consen 245 PLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI 324 (415)
T ss_pred cCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh
Confidence 235899999999887665 456789999999999999999999999999999999999999999985432100
Q ss_pred cccchhhHHHHH------hcCcc-----------hhhcccccC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 009750 281 PIKFNFGALDMI------RGKNI-----------LHLMDSHLE----GNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 339 (527)
Q Consensus 281 ~~~~~~~~~~~~------~~~~~-----------~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl 339 (527)
-..++...+... ..+.+ ....+.... ..........+.+|+++||..||.+|+|+.|+|
T Consensus 325 lGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL 404 (415)
T KOG0671|consen 325 LGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL 404 (415)
T ss_pred hCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence 000000000000 00000 000000000 001123456689999999999999999999999
Q ss_pred HHhcc
Q 009750 340 STLAP 344 (527)
Q Consensus 340 ~~L~~ 344 (527)
.|-..
T Consensus 405 ~HpFF 409 (415)
T KOG0671|consen 405 SHPFF 409 (415)
T ss_pred cCHHh
Confidence 98554
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=307.51 Aligned_cols=243 Identities=19% Similarity=0.193 Sum_probs=193.0
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHh-hcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGV-GKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l-~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.||.|+||.||+|.... +++.||||++.+..... ...+..|..++ ..++|+||+++++++...+.+++||||
T Consensus 2 ~~l~~g~~~~v~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRS---TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecC---CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEec
Confidence 467999999999999987 78899999987543222 22345555544 455899999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCcccc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST 231 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 231 (527)
+++++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..........+
T Consensus 79 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (260)
T cd05611 79 LNGGDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVG 155 (260)
T ss_pred cCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCC
Confidence 99999999997 3457899999999999999999999999 99999999999999999999999999887665556678
Q ss_pred CCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCH
Q 009750 232 NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS 311 (527)
Q Consensus 232 t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (527)
++.|++||.+.+..++.++||||||+++|+|++|..||...+... .......... ........
T Consensus 156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----------~~~~~~~~~~------~~~~~~~~ 218 (260)
T cd05611 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-----------VFDNILSRRI------NWPEEVKE 218 (260)
T ss_pred CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-----------HHHHHHhccc------CCCCcccc
Confidence 899999999988888999999999999999999999986432110 0011100000 01111222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCH---HHHHHH
Q 009750 312 EEATVVFDLASRCLQYEPRERPNT---KDLVST 341 (527)
Q Consensus 312 ~~~~~~~~li~~cl~~dp~~Rpt~---~~vl~~ 341 (527)
..+..+.+++.+||+.||.+||++ .+++.|
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 345778999999999999999966 455555
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=306.02 Aligned_cols=259 Identities=19% Similarity=0.213 Sum_probs=201.9
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLVA 149 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~ 149 (527)
..+..||.|++|.||+|.+.. +++.||+|.+...... ...++.+|++++++++||||++++++|... +.+++||
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 4 VELSRLGEGAGGSVTKCRLKN---TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred EEEEEeccCCceEEEEEEECC---CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 356788999999999999987 7899999998765432 345799999999999999999999998653 4689999
Q ss_pred EecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 150 EYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||+++++|.+++.. .....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 99999999988753 23456899999999999999999999999 999999999999999999999999998654332
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....++..|+|||.+.+..++.++|||||||++|+|++|..||........ . ...............+ ....
T Consensus 160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~----~~~~~~~~~~~~~~~~-~~~~ 232 (287)
T cd06621 160 AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL--G----PIELLSYIVNMPNPEL-KDEP 232 (287)
T ss_pred cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC--C----hHHHHHHHhcCCchhh-ccCC
Confidence 234567889999999988899999999999999999999999865422000 0 0001111111011110 0000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......++.+.+|+.+||..+|.+|||+.+++.+-+.
T Consensus 233 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 233 --GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred --CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 0011245678999999999999999999999998664
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=316.00 Aligned_cols=262 Identities=17% Similarity=0.198 Sum_probs=195.5
Q ss_pred CCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCCC
Q 009750 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156 (527)
Q Consensus 79 g~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~ 156 (527)
|.|+||+||++.+.. +++.||||++....... .+.+.+|+.+++.++||||++++++|..++..++||||+.+++
T Consensus 9 g~~~~~~v~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~ 85 (328)
T cd08226 9 GFCNLTSVYLARHTP---TGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGS 85 (328)
T ss_pred cccCceeEEEEEEcC---CCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCC
Confidence 445999999999977 88999999987554322 3578999999999999999999999999999999999999999
Q ss_pred HhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----------
Q 009750 157 LAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---------- 226 (527)
Q Consensus 157 L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---------- 226 (527)
|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+|++||+.+......
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (328)
T cd08226 86 ANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDF 164 (328)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccc
Confidence 999997544556899999999999999999999999 999999999999999999999999854322110
Q ss_pred -CccccCCccCCcccccCC--cCCCCcccchhhHHHHHHHhCCCCCCCCCccccc----cc----cc---cchhhHHHHH
Q 009750 227 -KSYSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWN----TV----PI---KFNFGALDMI 292 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~----~~----~~---~~~~~~~~~~ 292 (527)
....++..|+|||++.+. .++.++|||||||++|||++|+.||......... .. +. .+.. .....
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 243 (328)
T cd08226 165 PQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC-EESRM 243 (328)
T ss_pred cccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch-hhhhh
Confidence 011235679999999764 4789999999999999999999998654321000 00 00 0000 00000
Q ss_pred hc-----------Ccc-----hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 293 RG-----------KNI-----LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 293 ~~-----------~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.. ... .......+....+...+..+.+|+.+||..||++|||+.++++|-+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~ 312 (328)
T cd08226 244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK 312 (328)
T ss_pred ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence 00 000 000011111222344677899999999999999999999999986643
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=340.42 Aligned_cols=251 Identities=20% Similarity=0.169 Sum_probs=210.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
-.++.|++.||+|+||.|..++.+. +++.||+|++++.. ..+...|..|-++|..-+.+-||.++-.|.++.++
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~---t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKS---TEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeec---cccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 3445589999999999999999998 88999999998732 33446799999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
|+||||++||+|-.++.. ...+++..++.++..|+-||.-||+.| +|||||||+|||||..|++||+|||.+-....
T Consensus 151 YlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsClkm~~ 227 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA 227 (1317)
T ss_pred EEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhHHhcCC
Confidence 999999999999999963 337999999999999999999999999 99999999999999999999999998866553
Q ss_pred C-----CccccCCccCCcccccC-----CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 226 G-----KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 226 ~-----~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
. ...+|||-|++||++.. +.|+..+|+||+||++|||+.|..||..+... +
T Consensus 228 dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv-------------------e 288 (1317)
T KOG0612|consen 228 DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV-------------------E 288 (1317)
T ss_pred CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH-------------------H
Confidence 3 24589999999999842 56999999999999999999999999754321 2
Q ss_pred cchhhcccccCCCCC--HHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHhccc
Q 009750 296 NILHLMDSHLEGNFS--SEEATVVFDLASRCLQYEPRERPN---TKDLVSTLAPL 345 (527)
Q Consensus 296 ~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~dp~~Rpt---~~~vl~~L~~~ 345 (527)
...+|++..-...|| ...+..+.+||.+.+ -+|..|.. ++++-.|....
T Consensus 289 TY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF~ 342 (1317)
T KOG0612|consen 289 TYGKIMNHKESLSFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFFE 342 (1317)
T ss_pred HHHHHhchhhhcCCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCcccc
Confidence 223344432223344 457888999999987 58888987 99999987643
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=295.13 Aligned_cols=267 Identities=20% Similarity=0.264 Sum_probs=203.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeC------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG------ 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------ 142 (527)
.+..+.+||+|.||.||+++.+. +|+.||+|++.... ..-.....+|+++|..|.|+|++.++++|...
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n---~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKN---TGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcC---ccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 45567789999999999999988 78889999876532 33456789999999999999999999988532
Q ss_pred --CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCc
Q 009750 143 --DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 143 --~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
..+||||.+|+. +|..+|.. ....++..++.+++.++..||.|+|+.. |+|||+|++|+||+.+|.+||+|||++
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccc
Confidence 358999999988 89999953 4578999999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCC--------ccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCcc----------------
Q 009750 221 KNSRDGK--------SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMV---------------- 275 (527)
Q Consensus 221 ~~~~~~~--------~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~---------------- 275 (527)
+.+.... ..+.|.+|++||.+.|.. |+++.|||+.|||+.||+||.+.+.+....
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 7544321 234589999999998854 999999999999999999999998876432
Q ss_pred ccccccccchhhHHHH--HhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 276 VWNTVPIKFNFGALDM--IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 276 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.|..+.....+..++. ....... .+...+. |....+...+|+.++|..||.+|+++++++.|-.....
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~r-kv~n~~k---p~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd 321 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKR-KVKNRLK---PYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD 321 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhh-hhhhhcc---cccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence 1221111111111100 0000000 1111111 11113467899999999999999999999999876643
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=311.26 Aligned_cols=244 Identities=20% Similarity=0.229 Sum_probs=197.5
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+||.|+||+||+|.+.. +++.|+||++....... ...+.+|+++++.++||||+++++++.+....++||||
T Consensus 26 ~~~lg~g~~g~v~~~~~~~---~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 26 LHEIGHGSFGAVYFATNSH---TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred ceeeccCCCeEEEEEEECC---CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 4568999999999999877 78899999987543322 34688999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCcccc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST 231 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 231 (527)
+. |+|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..........+
T Consensus 103 ~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~ 179 (313)
T cd06633 103 CL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG 179 (313)
T ss_pred CC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence 96 478877753 3456899999999999999999999999 99999999999999999999999999877666666778
Q ss_pred CCccCCccccc---CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 232 NLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 232 t~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
+..|+|||++. ...++.++|||||||++|+|++|..||...+.... . . .+........
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~----------~-~--------~~~~~~~~~~ 240 (313)
T cd06633 180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----------L-Y--------HIAQNDSPTL 240 (313)
T ss_pred cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH----------H-H--------HHHhcCCCCC
Confidence 89999999984 35688899999999999999999999865321110 0 0 0000000111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.....+..+.+|+.+||+.+|.+||++.+++.+-.
T Consensus 241 ~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~ 275 (313)
T cd06633 241 QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDF 275 (313)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 11223456889999999999999999999998743
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=301.80 Aligned_cols=245 Identities=22% Similarity=0.288 Sum_probs=203.1
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
+...||.|++|.||++.+.. +++.+++|++........+.+.+|++++++++|+||+++++++......++++||++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 4 ILEKIGKGGFGEVYKARHKR---TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred eeeeeccCCceEEEEEEECC---CCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 55678999999999999987 778899999987655456789999999999999999999999999999999999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---Cccc
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KSYS 230 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---~~~~ 230 (527)
+++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ....
T Consensus 81 ~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 158 (253)
T cd05122 81 GGSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV 158 (253)
T ss_pred CCcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence 99999999642 257899999999999999999999998 999999999999999999999999998776554 3456
Q ss_pred cCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCC
Q 009750 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310 (527)
Q Consensus 231 ~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (527)
++..|+|||.+.+..++.++||||||+++|+|++|+.||...+... ............ ...+
T Consensus 159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----------~~~~~~~~~~~~-------~~~~ 220 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK-----------ALFKIATNGPPG-------LRNP 220 (253)
T ss_pred cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH-----------HHHHHHhcCCCC-------cCcc
Confidence 7889999999988889999999999999999999999986432110 000010000000 0111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 311 SEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 311 ~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
...+..+.+++.+||+.||++|||+.++++|
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 221 EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1225678999999999999999999999976
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=307.53 Aligned_cols=243 Identities=20% Similarity=0.174 Sum_probs=192.6
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHH---HhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAW---GVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~---~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
||+|+||.||++.... +++.||||.+.+..... ...+..|.. +++...||||+++++++...+..++||||
T Consensus 2 ig~g~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (278)
T cd05606 2 IGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 78 (278)
T ss_pred cccCCCeEEEEEEEec---CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEec
Confidence 6999999999999876 78899999987653221 223444443 44455899999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--Ccc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--KSY 229 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~ 229 (527)
++||+|..++. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ...
T Consensus 79 ~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (278)
T cd05606 79 MNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (278)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCc
Confidence 99999999886 4467999999999999999999999999 999999999999999999999999998754332 245
Q ss_pred ccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCC
Q 009750 230 STNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (527)
.++..|+|||++.++ .++.++||||+||++|||++|+.||......... . ..... ......
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~-----------~------~~~~~-~~~~~~ 217 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-----------E------IDRMT-LTMAVE 217 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH-----------H------HHHHh-hccCCC
Confidence 688999999999754 5899999999999999999999998654211100 0 00000 001122
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 309 FSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 309 ~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
++...+..+.+++.+||..+|.+|| ++.+++++-+.
T Consensus 218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~ 258 (278)
T cd05606 218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFF 258 (278)
T ss_pred CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccc
Confidence 3334467799999999999999999 99999987554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=311.81 Aligned_cols=248 Identities=21% Similarity=0.235 Sum_probs=200.2
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.++.||.|+||.||+|.+.. +++.||||.+...... ...++.+|+++++.++|+||+++++++......++|||
T Consensus 19 ~~~~lg~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 19 DLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHheeeCCCEEEEEEEEcC---CCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 45678999999999999987 7788999998653222 23468899999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCccc
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS 230 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 230 (527)
|+. |+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..........
T Consensus 96 ~~~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (308)
T cd06634 96 YCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV 172 (308)
T ss_pred ccC-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCccccc
Confidence 996 588877753 3456899999999999999999999998 9999999999999999999999999998776666677
Q ss_pred cCCccCCccccc---CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 231 TNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 231 ~t~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
+++.|+|||++. ...++.++|||||||++|+|++|..||...+... .. ..+.......
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----------~~--------~~~~~~~~~~ 233 (308)
T cd06634 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----------AL--------YHIAQNESPA 233 (308)
T ss_pred CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-----------HH--------HHHhhcCCCC
Confidence 889999999985 3457889999999999999999999875422110 00 0011111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
......+..+.+||.+||..+|.+||++.+++.+.+...
T Consensus 234 ~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 112245567889999999999999999999999866543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=307.58 Aligned_cols=264 Identities=20% Similarity=0.215 Sum_probs=195.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+++.||+|+||.||+|.... +++.||||++....... ...+.+|+.+++.++|+||+++++++..+...++|||
T Consensus 7 y~~~~~ig~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 7 YLNLEKLGEGSYATVYKGISRI---NGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred eEEEEEEEecCCEEEEEEEEcC---CCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 4467788999999999999987 77889999987654322 3467899999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 160 (291)
T cd07870 84 YMH-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY 160 (291)
T ss_pred ccc-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence 996 578777653 3356788889999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chh-hHHHHH-hcCcc-h
Q 009750 227 KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNF-GALDMI-RGKNI-L 298 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~-~~~~~~-~~~~~-~ 298 (527)
....+++.|+|||++.+. .++.++|||||||++|||++|..||...+.......... .+. ...... ..... .
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP 240 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccc
Confidence 233568899999998764 478899999999999999999999865432110000000 000 000000 00000 0
Q ss_pred hhcccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 299 HLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 299 ~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
............ ...+..+.+++.+||+.||.+|||+.+++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000000000 0114567899999999999999999999876
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=304.26 Aligned_cols=244 Identities=19% Similarity=0.224 Sum_probs=197.9
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-----CChHHHHHHHHHhhcCCCCccceeEEEEEeC--Cee
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-----PDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DER 145 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 145 (527)
.+.+.||+|+||.||+|.+.. +++.||+|.+..... .....+.+|++++++++|+||+++++++.+. ..+
T Consensus 5 ~~~~~lg~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 5 RLGKLLGRGAFGEVYLCYDAD---TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred eeeeeEccCCCeEEEEEEEcC---CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 456678999999999999987 788999998754321 1234788999999999999999999998764 458
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++||||+++++|.+++. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||+++....
T Consensus 82 ~~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 82 SIFVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 89999999999999986 3356889999999999999999999999 99999999999999999999999999875432
Q ss_pred -------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 226 -------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 226 -------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
.....++..|+|||++.+..++.++|||||||++|+|++|+.||...... ..+.
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------------------~~~~ 219 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM-------------------AAIF 219 (264)
T ss_pred ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH-------------------HHHH
Confidence 12345788999999999888999999999999999999999998532100 0111
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.+........++...+..+.+++.+||+ +|..||++.+++.|.
T Consensus 220 ~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 220 KIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred HHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 1111222233456667789999999999 579999999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=292.07 Aligned_cols=251 Identities=21% Similarity=0.203 Sum_probs=202.6
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
.||+|+++.|-.|.... +|+.+|||++.+.......++.+|++++.+. .|+||++|+++|+++..+|||||-|.||
T Consensus 85 ~LGeGAyasVqtcv~i~---t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GG 161 (463)
T KOG0607|consen 85 LLGEGAYASVQTCVSIQ---TGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGG 161 (463)
T ss_pred HhcCccceeeeeeeeec---cchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCc
Confidence 56999999999999888 8999999999988777788999999999999 6999999999999999999999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC---ceeecccCccccCC-------
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCFGLMKNSRD------- 225 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~---~kl~DFG~a~~~~~------- 225 (527)
.|..+++ ....+++.++.++..+|+.||.|||.+| |.||||||+|||..+-.. +|||||.+..-...
T Consensus 162 plLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 162 PLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred hHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 9999998 5678999999999999999999999999 999999999999965543 89999988643211
Q ss_pred ----CCccccCCccCCccccc---C--CcCCCCcccchhhHHHHHHHhCCCCCCCCCc--cccccccccchhhHHHHHhc
Q 009750 226 ----GKSYSTNLAYTPPEYLR---N--GRVTPESVIFSFGTVLLDLLSGKHIPPSHDM--VVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~---~--~~~~~~~DvwslGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 294 (527)
-.+.+|+..|||||++. + ..|+.++|.||||||||-||+|.+||.++-. ..|.....= ..-
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C------r~C-- 310 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC------RVC-- 310 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc------HHH--
Confidence 12346677899999873 2 3489999999999999999999999988632 344322110 000
Q ss_pred CcchhhcccccCC--CCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 295 KNILHLMDSHLEG--NFS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 295 ~~~~~~~~~~~~~--~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
-..++..+-.+ .|| ...+.+..+|+..+|..|+.+|.++..++.|-+
T Consensus 311 --Q~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw 363 (463)
T KOG0607|consen 311 --QNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW 363 (463)
T ss_pred --HHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence 01111111111 233 345778899999999999999999999988755
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=306.33 Aligned_cols=263 Identities=20% Similarity=0.243 Sum_probs=195.0
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCC-CCccceeEEEEEeC--CeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLR-HKRLANLIGYCCDG--DERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~--~~~~lv 148 (527)
.+++.||+|+||.||+|.... +++.||+|+++..... ......+|+.++.++. |+||+++++++.+. +.+++|
T Consensus 2 ~~~~~lg~g~~~~v~~~~~~~---~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 2 KILGKIGEGTFSEVLKAQSRK---TGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred ceEeeccccccceEEEEEEcC---CCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 367788999999999999987 7889999998765322 2234567999999994 99999999999987 889999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++. +.+||+|||++......
T Consensus 79 ~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 79 FELMDM-NLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred EecCCc-cHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 999974 88888864 2357899999999999999999999999 999999999999999 99999999998765432
Q ss_pred -CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc---c-cchhhHHHHHhcCcchhh
Q 009750 227 -KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP---I-KFNFGALDMIRGKNILHL 300 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~ 300 (527)
....++..|+|||++.. ..++.++|||||||++|||++|..||++.+........ . ..................
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07831 155 YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNY 234 (282)
T ss_pred cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccc
Confidence 23457889999998754 45788999999999999999999999765421100000 0 000000000000000000
Q ss_pred -cccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 301 -MDSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 301 -~~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
....... ......+..+.+||.+||+.+|++||++.+++.+-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~ 280 (282)
T cd07831 235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHP 280 (282)
T ss_pred cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCC
Confidence 0000000 00123467899999999999999999999999863
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=316.38 Aligned_cols=263 Identities=17% Similarity=0.194 Sum_probs=197.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeC------C
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG------D 143 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 143 (527)
+.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++... .
T Consensus 18 y~~~~~lg~g~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 18 YQNLKPIGSGAQGIVCAAYDTV---TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred eEEEEEeccCCCEEEEEEEECC---CCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 4467788999999999999987 788999999875422 2245688999999999999999999998643 3
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
..++||||+.+ +|.+.+.. .+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++..
T Consensus 95 ~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 95 DVYLVMELMDA-NLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred cEEEEEeccCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 57999999965 88888752 2889999999999999999999999 999999999999999999999999999865
Q ss_pred CCCC---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccc-cccc--ccch-hhHHHHH----
Q 009750 224 RDGK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVW-NTVP--IKFN-FGALDMI---- 292 (527)
Q Consensus 224 ~~~~---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~-~~~~--~~~~-~~~~~~~---- 292 (527)
.... ...++..|+|||++.+..++.++|||||||++|+|++|+.||...+.... .... ...+ .......
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
T cd07850 169 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTV 248 (353)
T ss_pred CCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhh
Confidence 4432 34578899999999998999999999999999999999999976542110 0000 0000 0000000
Q ss_pred ----hc------CcchhhcccccC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 293 ----RG------KNILHLMDSHLE----GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 293 ----~~------~~~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.. ..+..+...... ...+...+..+.+|+.+||+.||++|||+.++|.+-+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~ 313 (353)
T cd07850 249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313 (353)
T ss_pred hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChh
Confidence 00 000011110000 0011234567889999999999999999999998854
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=304.82 Aligned_cols=237 Identities=19% Similarity=0.220 Sum_probs=203.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 147 (527)
.+++..||.|+||.|-++..+. +.+.+|||+++++.. .+.+--+.|-++|... +-|.++++..+|..-+.+|+
T Consensus 351 FnFl~VlGKGSFGKVlLaerkg---tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 351 FNFLMVLGKGSFGKVLLAERKG---TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred cceEEEeccCccceeeeecccC---cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 3467888999999999999887 778999999998753 2345567788888887 57889999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC---
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR--- 224 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~--- 224 (527)
||||+.||+|-.+++ .-+.+-+..+..++.+|+-||-+||++| ||+||||..|||||.+|++||+|||+++..-
T Consensus 428 VMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~ 504 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG 504 (683)
T ss_pred EEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCC
Confidence 999999999999997 5678889999999999999999999999 9999999999999999999999999997532
Q ss_pred -CCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 225 -DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 225 -~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
...+++|||.|+|||++..++|+.++|+|||||+||||+.|++||.+.|..+. +..|.+.
T Consensus 505 ~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el-------------------F~aI~eh 565 (683)
T KOG0696|consen 505 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL-------------------FQAIMEH 565 (683)
T ss_pred cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH-------------------HHHHHHc
Confidence 33578999999999999999999999999999999999999999988763321 2223332
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNT 335 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~ 335 (527)
. -.+|...+.++.+++...|.+.|.+|...
T Consensus 566 n--vsyPKslSkEAv~ickg~ltK~P~kRLGc 595 (683)
T KOG0696|consen 566 N--VSYPKSLSKEAVAICKGLLTKHPGKRLGC 595 (683)
T ss_pred c--CcCcccccHHHHHHHHHHhhcCCccccCC
Confidence 2 23677788889999999999999999643
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=308.29 Aligned_cols=264 Identities=19% Similarity=0.224 Sum_probs=197.9
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+++.||.|++|.||+|.+.. +|+.||||++...... ..+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 3 KVEKIGEGTYGVVYKARDKL---TGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred hheEecCCCCeEEEEEEEcC---CCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 56778999999999999987 7889999998755322 235788999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----C
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----K 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~ 227 (527)
++ ++|.+++.......+++..++.++.||++||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 157 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYT 157 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccC
Confidence 95 58999987544347899999999999999999999998 999999999999999999999999998754322 2
Q ss_pred ccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHH-hcCcchhhc
Q 009750 228 SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMI-RGKNILHLM 301 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~ 301 (527)
...++..|+|||++.+. .++.++|||||||++|+|++|+.||...+.......... .....+... ........+
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence 23457889999988664 478899999999999999999999875532110000000 000000000 000000000
Q ss_pred ccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 302 DSHLE---GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 302 ~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
..... .......+..+.+++.+||+.||.+|||+.+++.+-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~ 281 (283)
T cd07835 238 PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHP 281 (283)
T ss_pred ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCC
Confidence 00000 001122346788999999999999999999999763
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=315.44 Aligned_cols=264 Identities=19% Similarity=0.227 Sum_probs=195.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeC-----Cee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDG-----DER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 145 (527)
+.+++.||.|+||.||+|.+.. +++.||||+++.... .....+.+|+.++++++||||+++++++... ...
T Consensus 7 y~i~~~lg~G~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 7 YQNLSYIGEGAYGMVCSATHKP---TGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred eEEEEEEEecCCeEEEEEEEcC---CCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 4467788999999999999987 788999999875322 2345688999999999999999999987654 357
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++|+||+.+ +|..++. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 84 ~lv~e~~~~-~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 158 (336)
T cd07849 84 YIVQELMET-DLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADP 158 (336)
T ss_pred EEEehhccc-CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence 999999975 8888874 457999999999999999999999999 99999999999999999999999999876433
Q ss_pred C-------CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc----ccchhhHHHHHh
Q 009750 226 G-------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP----IKFNFGALDMIR 293 (527)
Q Consensus 226 ~-------~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~----~~~~~~~~~~~~ 293 (527)
. ....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+........ ............
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
T cd07849 159 EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCII 238 (336)
T ss_pred cccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 2 12457889999998765 45889999999999999999999999764321100000 000000000000
Q ss_pred cCcchhhcccc-cCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 294 GKNILHLMDSH-LEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 294 ~~~~~~~~~~~-~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.......+... ..... ....+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~ 294 (336)
T cd07849 239 SLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY 294 (336)
T ss_pred chhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 00000000000 00000 1123566889999999999999999999999843
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=353.72 Aligned_cols=253 Identities=25% Similarity=0.366 Sum_probs=199.8
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
..||+|+||.||+|.... +++.||||++..... ....|++++++++|||||+++|+|.+....++||||+++|
T Consensus 696 ~~ig~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g 768 (968)
T PLN00113 696 NVISRGKKGASYKGKSIK---NGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGK 768 (968)
T ss_pred cEEccCCCeeEEEEEECC---CCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCC
Confidence 456999999999999876 788999999875432 2235688999999999999999999999999999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhh---hCCCccccccCCCceEeCCCCCceeecccCccccCCCCccccC
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS---SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN 232 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH---~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~t 232 (527)
+|.++++ .++|..+..|+.||++||+||| +.+ |+||||||+||+++.++..++. ||............+|
T Consensus 769 ~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t 841 (968)
T PLN00113 769 NLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFIS 841 (968)
T ss_pred cHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCCcccc
Confidence 9999995 3899999999999999999999 456 9999999999999999988876 7766554444455788
Q ss_pred CccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC--CCC
Q 009750 233 LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG--NFS 310 (527)
Q Consensus 233 ~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 310 (527)
+.|+|||++.+..++.++|||||||++|||+||+.||........ ....+............+++..+.. ..+
T Consensus 842 ~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (968)
T PLN00113 842 SAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHG-----SIVEWARYCYSDCHLDMWIDPSIRGDVSVN 916 (968)
T ss_pred ccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCC-----cHHHHHHHhcCccchhheeCccccCCCCcc
Confidence 999999999999999999999999999999999999843211100 0011111111222223333333322 234
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 311 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 311 ~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
......+.+++.+||+.||++||||.++++.|+.+..
T Consensus 917 ~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 917 QNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 5566678899999999999999999999999998754
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=300.85 Aligned_cols=243 Identities=21% Similarity=0.297 Sum_probs=202.6
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+...||.|++|.||++.+.. +++.|+||.+..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 3 QLGDLIGRGAFGVVYKGLNLE---TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred eeeeEEcccCCeEEEEEEEcC---CCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 356778999999999999887 778899999987654 234679999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 156 (254)
T cd06627 80 YAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDD 156 (254)
T ss_pred cCCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCcccc
Confidence 9999999999973 367999999999999999999999999 9999999999999999999999999988765433
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
...++..|+|||...+..++.++||||||+++|+|++|+.||...+... ..... . ....
T Consensus 157 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~-----------~~~~~--------~-~~~~ 216 (254)
T cd06627 157 ASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA-----------ALFRI--------V-QDDH 216 (254)
T ss_pred cccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH-----------HHHHH--------h-ccCC
Confidence 2457889999999988788999999999999999999999885432100 00000 0 0111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
...+...+..+.+++.+||..+|++|||+.+++.+
T Consensus 217 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 217 PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 22334456778899999999999999999999864
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=300.99 Aligned_cols=245 Identities=20% Similarity=0.242 Sum_probs=204.0
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+++.||.|+||.||++.+.. +++.|++|++..... ...+.+.+|+++++.++|||++++++.+......++|+|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 3 EIIKQIGKGSFGKVYLVRRKS---DGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred eEEeeeccCCCeEEEEEEEcC---CCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 356778999999999999987 788899999976543 345679999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcC--CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 151 YMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|+++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 158 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD 158 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCcc
Confidence 999999999997532 477999999999999999999999998 9999999999999999999999999987654432
Q ss_pred ---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...+++.|+|||.+.+..++.++||||+|+++++|++|..||...+... .... .. ..
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----------~~~~--------~~-~~ 218 (258)
T cd08215 159 LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE-----------LALK--------IL-KG 218 (258)
T ss_pred eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH-----------HHHH--------Hh-cC
Confidence 3457888999999988889999999999999999999999985432110 0000 00 01
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.....+...+..+.+++.+||..+|.+|||+.+++++
T Consensus 219 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 219 QYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1122333455678999999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=309.37 Aligned_cols=260 Identities=20% Similarity=0.223 Sum_probs=196.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.++..||.|++|.||+|.+.. +++.||||.+...... ..+.+.+|++++++++||||+++++++......++|
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRV---TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecC---CCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 45577888999999999999987 7889999998754322 235788999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-CCCceeecccCccccCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~~~- 226 (527)
|||++ ++|.+++.......+++..+..++.||+.||.|||+++ ++||||+|+||+++. ++.+||+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 99996 48888886544445688899999999999999999999 999999999999985 557999999998754322
Q ss_pred ---CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC-------
Q 009750 227 ---KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK------- 295 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 295 (527)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.||...+...... .........
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 158 RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELF-------KIFRILGTPNEETWPG 230 (294)
T ss_pred cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------HHHHHhCCCChhhccc
Confidence 233567899999998664 57899999999999999999999987543211000 000000000
Q ss_pred --cchhhcc--cccCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 296 --NILHLMD--SHLEGN----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 296 --~~~~~~~--~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
....... ...... .....+..+.+++.+||+.+|++||++.+++.+-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~ 285 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHE 285 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0000000 000000 0122345688999999999999999999999863
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=308.81 Aligned_cols=257 Identities=18% Similarity=0.205 Sum_probs=194.2
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe-----
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE----- 144 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~----- 144 (527)
.++..||+|+||.||+|.+.. +++.||||+++..... ....+.+|+.+++.+ +||||+++++++.....
T Consensus 4 ~~~~~lg~g~~g~vy~~~~~~---~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 4 EKLEKIGEGTYGKVYKARDKN---TGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred eEeeEecccCCeEEEEEEECC---CCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 366778999999999999987 7889999998754322 245788999999999 56999999999987665
Q ss_pred eeEEEEecCCCCHhHHhhhcC---CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-CCCceeecccCc
Q 009750 145 RLLVAEYMPNDTLAKHLFHWE---NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLM 220 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a 220 (527)
.++||||+++ +|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||++
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999986 8988886432 246899999999999999999999999 999999999999998 899999999998
Q ss_pred cccCCC----CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 221 KNSRDG----KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 221 ~~~~~~----~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
...... ....+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+....... ........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~-------~~~~~~~~ 231 (295)
T cd07837 159 RAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLH-------IFKLLGTP 231 (295)
T ss_pred eecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-------HHHHhCCC
Confidence 754322 22345788999998865 4579999999999999999999999876432211000 00000000
Q ss_pred c---chhh---cc----cccCC----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 296 N---ILHL---MD----SHLEG----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 296 ~---~~~~---~~----~~~~~----~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
. .... .. ..... ......+..+.++|.+||..||.+||++.+++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 0000 00 00000 0012245678899999999999999999999976
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=299.95 Aligned_cols=245 Identities=20% Similarity=0.257 Sum_probs=203.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLVA 149 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~ 149 (527)
+...||+|++|.||+|.+.. +++.|++|++..... ...+.+.+|++++++++||||+++++.+... ..+++|+
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 4 RGELLGRGSFGSVYLALDKD---TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred eeeEeeecCceEEEEEEECC---CCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 45667999999999999987 788999999876543 2356799999999999999999999999988 8899999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 81 EYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999999974 338999999999999999999999998 9999999999999999999999999987655432
Q ss_pred ----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 228 ----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
...++..|+|||.+.+...+.++||||||+++++|++|..||...+... . ....+...
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------------~-----~~~~~~~~ 219 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM-------------A-----ALYKIGSS 219 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-------------H-----HHHhcccc
Confidence 3456889999999988889999999999999999999999986543100 0 00011111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
......+...+..+.+++.+||+.||.+||++.+++.+-
T Consensus 220 ~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~ 258 (260)
T cd06606 220 GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHP 258 (260)
T ss_pred CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCC
Confidence 111223444567899999999999999999999999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=310.28 Aligned_cols=266 Identities=18% Similarity=0.253 Sum_probs=196.8
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLL 147 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~l 147 (527)
.+++.||+|+||.||+|...... +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+. ..+++
T Consensus 3 ~~~~~ig~g~~g~v~~~~~~~~~-~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 3 EIEGCIGRGTYGRVYKAKRKNGK-DGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred eEEEEeccCCcEEEEEEEecCCC-CCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 46778999999999999997531 46889999998743 23346788999999999999999999999988 78999
Q ss_pred EEEecCCCCHhHHhhhc---CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC----CCCceeecccCc
Q 009750 148 VAEYMPNDTLAKHLFHW---ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE----NGDPRLSCFGLM 220 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~---~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~----~~~~kl~DFG~a 220 (527)
||||+++ +|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+|||++. ++.+||+|||++
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999975 677776432 2236899999999999999999999999 999999999999999 999999999998
Q ss_pred cccCCC-------CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchh--hHHH
Q 009750 221 KNSRDG-------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNF--GALD 290 (527)
Q Consensus 221 ~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~ 290 (527)
...... ....+++.|+|||++.+. .++.++|||||||++++|++|++||.+.........+..... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 765332 233567889999988764 478999999999999999999999875533220000000000 0000
Q ss_pred HHh------------cCcchhhcccccCCCCC---------H--HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 291 MIR------------GKNILHLMDSHLEGNFS---------S--EEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 291 ~~~------------~~~~~~~~~~~~~~~~~---------~--~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.+. ........+......++ . ..+..+.+++.+||+.||++|||+.+++.|
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000 00000000000011111 0 234568899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=306.52 Aligned_cols=264 Identities=19% Similarity=0.243 Sum_probs=198.5
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
.+++.||.|++|.||+|++.. +++.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..+|||||
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 3 KQLEKLGEGTYATVYKGRNRT---TGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred eEeeeeccCCceEEEEEEECC---CCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 467788999999999999987 7899999999865432 346788999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcC-CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 152 MPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 152 ~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
+++ +|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (284)
T cd07836 80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF 157 (284)
T ss_pred CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc
Confidence 985 8988886432 346899999999999999999999999 999999999999999999999999998754332
Q ss_pred CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHhc-Ccchhh
Q 009750 227 KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIRG-KNILHL 300 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~ 300 (527)
....++..|++||++.+. .++.++|||||||++|+|++|+.||.+.+.......... .....+..... ......
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPT 237 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence 234567889999998664 468899999999999999999999865432110000000 00000000000 000000
Q ss_pred ccccc---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 301 MDSHL---EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 301 ~~~~~---~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..... ........+..+.+++.+||+.||.+||++.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000 000112335678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=309.58 Aligned_cols=264 Identities=20% Similarity=0.247 Sum_probs=194.0
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCC----
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---- 143 (527)
..+.+++.||+|+||.||+|.... +++.||||.+...... ....+.+|+.++++++||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKK---TKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECC---CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 445678889999999999999987 7899999998654322 2345678999999999999999999987654
Q ss_pred ----eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccC
Q 009750 144 ----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 144 ----~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
..++||||+.+ +|.+.+.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCC
Confidence 35999999965 88888853 3346899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC--------CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccc--------c-
Q 009750 220 MKNSRDG--------KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV--------P- 281 (527)
Q Consensus 220 a~~~~~~--------~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~--------~- 281 (527)
+...... ....++..|+|||++.+.. ++.++||||||+++|||+||+.||.+.+....... +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 8754322 1234678899999987654 78899999999999999999998865432100000 0
Q ss_pred -ccchhhHHHHHhc----CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 282 -IKFNFGALDMIRG----KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 282 -~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
............. ..........+ .+...+..+.+||.+||..||.+|||+.++++|-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~ 308 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERL---KPYVKDPHALDLIDKLLVLDPAKRIDADTALNHD 308 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhc---ccccCCHHHHHHHHHHhcCChhhccCHHHHhcCC
Confidence 0000000000000 00000000000 0011234577999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-38 Score=308.49 Aligned_cols=258 Identities=18% Similarity=0.194 Sum_probs=192.3
Q ss_pred CCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCCCHhH
Q 009750 82 APNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAK 159 (527)
Q Consensus 82 ~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~ 159 (527)
++|.||.++... +++.||||+++... ....+.+.+|+++++.++|+||+++++++...+..+++|||+++|+|.+
T Consensus 12 ~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 12 DLMIVHLAKHKP---TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred CCceEEEEEecC---CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 455666666665 78899999997652 2334679999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-----------Cc
Q 009750 160 HLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-----------KS 228 (527)
Q Consensus 160 ~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-----------~~ 228 (527)
++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||.+...... ..
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~ 167 (314)
T cd08216 89 LLKTHFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKS 167 (314)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeecccccccccccccccc
Confidence 997655567899999999999999999999999 999999999999999999999999987643221 12
Q ss_pred cccCCccCCcccccCC--cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc------cccchhhHHHHHhcCcchh-
Q 009750 229 YSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV------PIKFNFGALDMIRGKNILH- 299 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~- 299 (527)
..++..|+|||++.+. .++.++|||||||++|||++|..||...+....... +........... ......
T Consensus 168 ~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 246 (314)
T cd08216 168 SVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY-EDSMSQS 246 (314)
T ss_pred ccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh-cCCcCcc
Confidence 3456789999998763 488999999999999999999999865432110000 000000000000 000000
Q ss_pred ---hcc----cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 300 ---LMD----SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 300 ---~~~----~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
... ...........+..+.+|+.+||..||++|||+.++++|-..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~ 298 (314)
T cd08216 247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFF 298 (314)
T ss_pred cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchH
Confidence 000 001111223456778999999999999999999999998653
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=304.02 Aligned_cols=237 Identities=20% Similarity=0.240 Sum_probs=194.1
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
||.|+||.||++.+.. +++.|++|++..... ...+.+.+|++++++++||||+++++.+......++||||+++
T Consensus 1 lg~g~~~~vy~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (265)
T cd05579 1 ISKGAYGRVFLAKKKS---TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPG 77 (265)
T ss_pred CCCCCceEEEEEEECC---CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCC
Confidence 5899999999999986 788999999976543 2345789999999999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--------
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-------- 226 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-------- 226 (527)
++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 78 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 78 GDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 999999974 347899999999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....++..|++||.+.+...+.++||||||+++|+|++|..||...+... ... .+..
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----------~~~--------~~~~ 215 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE-----------IFQ--------NILN 215 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-----------HHH--------HHhc
Confidence 12356788999999988889999999999999999999999986432110 000 0100
Q ss_pred cccCCCCCHH--HHHHHHHHHHHhcccCCCCCCCH---HHHHHH
Q 009750 303 SHLEGNFSSE--EATVVFDLASRCLQYEPRERPNT---KDLVST 341 (527)
Q Consensus 303 ~~~~~~~~~~--~~~~~~~li~~cl~~dp~~Rpt~---~~vl~~ 341 (527)
.. ..++.. .+..+.+++.+||+.+|.+|||+ .+++++
T Consensus 216 ~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 216 GK--IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred CC--cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 00 111222 26778999999999999999999 555544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=299.88 Aligned_cols=245 Identities=17% Similarity=0.223 Sum_probs=203.2
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+++.||.|+||.||++.... +++.+|||++...... ....+.+|+++++.++|+||+++++++......++|||
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 3 KVLKKLGKGSYGSVYKVKRLS---DNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred eEeeeecCCCceeEEEEEECC---CCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 367788999999999999887 7788999998765432 24468899999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 151 YMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|.||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 158 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMA 158 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCc
Confidence 99999999998642 2356899999999999999999999999 999999999999999999999999998765443
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
....++..|++||.+.+..++.++|+||||+++|+|++|+.||...+... ....+.....
T Consensus 159 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--------------------~~~~~~~~~~ 218 (256)
T cd08530 159 KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--------------------LRYKVQRGKY 218 (256)
T ss_pred ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------------------HHHHHhcCCC
Confidence 23456889999999998889999999999999999999999986432110 0000111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
...+...+..+.+++.+||..+|.+|||+.+++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 22334566779999999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=306.27 Aligned_cols=257 Identities=23% Similarity=0.290 Sum_probs=197.9
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 148 (527)
.+++.||.|+||.||+|.... +++.+|+|++.... ......+.+|+++++.++|+||+++++++... +..++|
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKK---TGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred eeeEEeccCCCeEEEEEEECC---CCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence 367788999999999999987 78899999998764 22345788999999999999999999999988 889999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++.......
T Consensus 79 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 79 FEYMDH-DLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred eccccc-cHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 999975 89988864 2357899999999999999999999999 9999999999999999999999999987654432
Q ss_pred ----ccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc---C---c
Q 009750 228 ----SYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG---K---N 296 (527)
Q Consensus 228 ----~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~ 296 (527)
...++..|+|||.+.+ ..++.++||||||+++|||+||+.||...+...... ........ . .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 228 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE-------KIFELCGSPTDENWPG 228 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-------HHHHHhCCCchhhccc
Confidence 2345778999998765 457899999999999999999999986543211000 00000000 0 0
Q ss_pred chhh-----------cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 297 ILHL-----------MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 297 ~~~~-----------~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
...+ ....+...+...++..+.+++.+||..+|.+||++.+++.+-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~ 285 (287)
T cd07840 229 VSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHE 285 (287)
T ss_pred cccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCc
Confidence 0000 000000001111266789999999999999999999998763
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=312.99 Aligned_cols=265 Identities=20% Similarity=0.260 Sum_probs=198.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeC-----Ce
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG-----DE 144 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 144 (527)
+.+++.||.|+||+||+|.+.. +++.||||.+.... ......+.+|+.+++.++|+||+++++++... ..
T Consensus 7 y~~~~~lg~G~~~~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 7 YVPIKPIGRGAYGIVCSAKNSE---TNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred eeEEEEeccCCCeEEEEEEecC---CCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 4467788999999999999887 78999999987542 22345688999999999999999999988654 35
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
.++||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 84 ~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 84 VYIVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred EEEEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 799999996 68998886 4467999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC----CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHHHhcC
Q 009750 225 DG----KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDMIRGK 295 (527)
Q Consensus 225 ~~----~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 295 (527)
.. ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+......... ......+......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence 33 23457889999998865 458999999999999999999999997643210000000 0000000000000
Q ss_pred cchhhccc---ccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 296 NILHLMDS---HLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 296 ~~~~~~~~---~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.....+.. .... ......+..+.+|+.+||+.||++|||+.++++|-+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~ 293 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY 293 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcc
Confidence 00000000 0000 011234567899999999999999999999999844
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=313.67 Aligned_cols=265 Identities=17% Similarity=0.211 Sum_probs=198.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEe----CCeeeE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLL 147 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~l 147 (527)
+.+.||.|+||.||+|.... +++.||+|++..... ...+.+.+|+.+|++++||||+++++++.. ....++
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~---~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 85 (334)
T cd07855 9 PIENIGSGAYGVVCSAIDTR---SGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV 85 (334)
T ss_pred eeeeeecCCCeEEEEEEEcC---CCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEE
Confidence 56778999999999999987 788999999876432 234678899999999999999999998763 356899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 86 v~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 86 VMDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred EEehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 999996 58999986 4456999999999999999999999999 999999999999999999999999998754321
Q ss_pred -------CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc----cccchhhHHHHHhc
Q 009750 227 -------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV----PIKFNFGALDMIRG 294 (527)
Q Consensus 227 -------~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 294 (527)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+....... ..............
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 13367889999999865 4589999999999999999999999976532110000 00000000000000
Q ss_pred Ccchhhccc-ccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 295 KNILHLMDS-HLEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 295 ~~~~~~~~~-~~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
..+...... ...... ....+..+.++|.+||+.+|.+|||+.+++.+.+.-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~ 298 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA 298 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence 111111110 000111 122467799999999999999999999999986653
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=302.78 Aligned_cols=255 Identities=12% Similarity=0.048 Sum_probs=184.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-h----------HHHHHHHHHhhcCCCCccceeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-P----------KQFADEAWGVGKLRHKRLANLIGYC 139 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~----------~~~~~E~~~l~~l~H~nIv~l~~~~ 139 (527)
.+.+.+.||+|+||.||+|....+...+..+|+|+........ . .....+...+..++|+||+++++++
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~ 92 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG 92 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence 4557778999999999999987632225667777654332211 0 1123344556677999999999987
Q ss_pred EeCC----eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceee
Q 009750 140 CDGD----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (527)
Q Consensus 140 ~~~~----~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~ 215 (527)
.... ..++++|++.. ++.+.+.. ....++..++.|+.||+.||.|||+.+ ++||||||+|||++.++.+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 93 SFKRCRMYYRFILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred eEecCCceEEEEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEEE
Confidence 6543 34788888744 67776652 334678889999999999999999999 9999999999999999999999
Q ss_pred cccCccccCCC-----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccc
Q 009750 216 CFGLMKNSRDG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKF 284 (527)
Q Consensus 216 DFG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~ 284 (527)
|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~------- 241 (294)
T PHA02882 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN------- 241 (294)
T ss_pred EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH-------
Confidence 99998754211 224689999999999999999999999999999999999999975421110
Q ss_pred hhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 285 NFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
........-+..+..... .....+..+.+++..||..+|.+||++.++++.|
T Consensus 242 ---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 242 ---LIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred ---HHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 000000000011111100 1122356788999999999999999999999876
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=317.84 Aligned_cols=193 Identities=24% Similarity=0.282 Sum_probs=169.7
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCC------eeeEE
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD------ERLLV 148 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv 148 (527)
..||+|+||.||+|+++. +|+.||||.+++... ...+...+|+++|++|+|+|||+++++-+... ...+|
T Consensus 19 e~LG~Ga~g~V~rgrnke---tG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKE---TGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred hhhcCCccceeeeecccc---cccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 456999999999999988 999999999987543 34678999999999999999999999865443 56899
Q ss_pred EEecCCCCHhHHhhhc-CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe--CCCC--CceeecccCcccc
Q 009750 149 AEYMPNDTLAKHLFHW-ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF--DENG--DPRLSCFGLMKNS 223 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll--~~~~--~~kl~DFG~a~~~ 223 (527)
||||.||||...|+.. ....|++.+.+.++..++.||.|||+++ ||||||||.||++ ..+| .-||+|||.|+..
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 9999999999999754 3457999999999999999999999999 9999999999999 2334 4899999999998
Q ss_pred CCCC---ccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCC
Q 009750 224 RDGK---SYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSH 272 (527)
Q Consensus 224 ~~~~---~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~ 272 (527)
.+++ +.+||..|.+||+.-. ..|+..+|.|||||++|+..||..||-..
T Consensus 175 ~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 175 DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 8774 5689999999999984 78999999999999999999999998644
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-38 Score=304.19 Aligned_cols=251 Identities=20% Similarity=0.258 Sum_probs=198.7
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC----CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+.||.|+||.||++....+..+|+.||+|+++.... ...+.+.+|+.++.++ +|+||+++++++..+...++
T Consensus 3 ~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (290)
T cd05613 3 ELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHL 82 (290)
T ss_pred eeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEE
Confidence 466788999999999999865444788999999875422 2245788999999999 69999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||+|+|||++.++.+||+|||++......
T Consensus 83 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 159 (290)
T cd05613 83 ILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE 159 (290)
T ss_pred EEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence 9999999999999973 456889999999999999999999999 999999999999999999999999998765432
Q ss_pred ----CccccCCccCCcccccCC--cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 227 ----KSYSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
....++..|+|||.+.+. .++.++|||||||++|+|++|..||........ ..... ..+
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~----------~~~~~-----~~~ 224 (290)
T cd05613 160 VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS----------QAEIS-----RRI 224 (290)
T ss_pred ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc----------HHHHH-----HHh
Confidence 234578899999998753 467899999999999999999999853211000 00000 000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLA 343 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~ 343 (527)
.. ....++...+..+.+|+.+||+.||.+|| ++.+++.+-.
T Consensus 225 ~~--~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~ 270 (290)
T cd05613 225 LK--SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPF 270 (290)
T ss_pred hc--cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcc
Confidence 00 11123344566788999999999999997 7788877643
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=291.00 Aligned_cols=250 Identities=20% Similarity=0.240 Sum_probs=195.2
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
-+++||.|+||+|++-.++. +|+..|||+++.... .+.+++..|.+...+- +.||||+++|.+..++..+|.||+
T Consensus 68 dlg~iG~G~fG~V~KM~hk~---sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKP---SGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHHHhcCCcchhhhhhhcCc---cCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 36788999999999999998 899999999986654 3456799999877776 789999999999999999999999
Q ss_pred cCCCCHhHHh---hhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 152 MPNDTLAKHL---FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 152 ~~~g~L~~~l---~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|+- +|..+- ..-....+++...-.|..-.+.||.||...-.||||||||+|||||..|.+||||||++..+.+.
T Consensus 145 Md~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA 223 (361)
T KOG1006|consen 145 MDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA 223 (361)
T ss_pred Hhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHH
Confidence 964 665443 33356678999999999999999999987656999999999999999999999999998765443
Q ss_pred -CccccCCccCCcccccC--CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 -KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
+.-.|...|||||.+.. ..|+.+|||||||++|||+.||+.|+.+-+.. +........+....+..
T Consensus 224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv----------feql~~Vv~gdpp~l~~- 292 (361)
T KOG1006|consen 224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV----------FEQLCQVVIGDPPILLF- 292 (361)
T ss_pred hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH----------HHHHHHHHcCCCCeecC-
Confidence 33467889999999954 34899999999999999999999998642111 00111111111111110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..-....+..+..+|..||.+|...||...+++++
T Consensus 293 ---~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 293 ---DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ---cccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 00112356778999999999999999999998875
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=309.57 Aligned_cols=256 Identities=18% Similarity=0.189 Sum_probs=195.7
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--------------hHHHHHHHHHhhcCCCCccceeEEEEEe
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------------PKQFADEAWGVGKLRHKRLANLIGYCCD 141 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 141 (527)
+.||.|+||+||+|.+.. +++.||||+++...... ...+.+|+++++.++|+||+++++++..
T Consensus 15 ~~ig~G~~g~vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 91 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTL---TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE 91 (335)
T ss_pred hcccCCCceeEEEEEECC---CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEec
Confidence 458999999999999887 78899999987543221 1257899999999999999999999999
Q ss_pred CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
.+..++||||+. |+|.+++. ....+++.....++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.
T Consensus 92 ~~~~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~ 167 (335)
T PTZ00024 92 GDFINLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLAR 167 (335)
T ss_pred CCcEEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCcccee
Confidence 999999999997 58999986 4556899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCC--------------C----CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc
Q 009750 222 NSRD--------------G----KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI 282 (527)
Q Consensus 222 ~~~~--------------~----~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~ 282 (527)
.... . ....++..|+|||++.+.. ++.++|||||||++|||++|..||.+.+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~--- 244 (335)
T PTZ00024 168 RYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG--- 244 (335)
T ss_pred ecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---
Confidence 5441 0 1223577899999997644 6889999999999999999999987654221000
Q ss_pred cchhhHHHHHhcCc---chhhc--------ccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 283 KFNFGALDMIRGKN---ILHLM--------DSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 283 ~~~~~~~~~~~~~~---~~~~~--------~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.......... +.... ...... ......+..+.+++.+||+.+|++|||+++++.+.+.-
T Consensus 245 ----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~ 317 (335)
T PTZ00024 245 ----RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317 (335)
T ss_pred ----HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccC
Confidence 0000000000 00000 000000 00112356688999999999999999999999987654
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-38 Score=303.03 Aligned_cols=263 Identities=18% Similarity=0.278 Sum_probs=198.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+++.||.|++|+||+|.... +++.|+||++...... ......+|+..+++++ |+||+++++++..++..++||||
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 3 VIKQLGDGTFGSVYLARNKE---TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred eheeeccCCceEEEEEEECC---CCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 56778999999999999987 7788999998765332 2334567999999998 99999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---Cc
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KS 228 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---~~ 228 (527)
+ +|+|.+++.......+++..++.++.||+.+|.|||+++ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (283)
T cd07830 80 M-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTD 157 (283)
T ss_pred C-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCC
Confidence 9 789999987544457899999999999999999999999 999999999999999999999999998765543 23
Q ss_pred cccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccc-------ccccchhhHHHHHhcCcchhh
Q 009750 229 YSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNT-------VPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 300 (527)
..++..|+|||++.+ ..++.++|+||||++++||++|++||+......... .+....+ .............
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 236 (283)
T cd07830 158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDW-PEGYKLASKLGFR 236 (283)
T ss_pred CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhh-hhHhhhhcccccc
Confidence 457889999998854 457899999999999999999999987553211000 0000000 0000000000000
Q ss_pred cccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 301 MDSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 301 ~~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
+...... ......+..+.+|+.+||+.||.+|||+.+++.+-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~ 281 (283)
T cd07830 237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHP 281 (283)
T ss_pred ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCC
Confidence 0000000 00111246789999999999999999999998763
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=303.14 Aligned_cols=264 Identities=20% Similarity=0.261 Sum_probs=200.9
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+++.||.|++|.||+|.... +++.+++|++...... ....+.+|++++++++|+||+++++++..+...++|||
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKL---TGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred ccceeeecCCCceEEEEEcCC---CCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence 356788999999999999876 7889999998765433 34678899999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++ +|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||.+.......
T Consensus 79 ~~~~-~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~ 155 (283)
T cd05118 79 FMDT-DLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPY 155 (283)
T ss_pred ccCC-CHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccc
Confidence 9976 88888864 3367899999999999999999999999 9999999999999999999999999987655432
Q ss_pred -ccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc---c-hhhHHHHHhc---Ccch
Q 009750 228 -SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK---F-NFGALDMIRG---KNIL 298 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~---~-~~~~~~~~~~---~~~~ 298 (527)
...++..|+|||.+.+. .++.++|||||||++|+|+||+.||+..+.......... . ....+..... ....
T Consensus 156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05118 156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKF 235 (283)
T ss_pred cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhh
Confidence 34567889999999876 689999999999999999999999876542110000000 0 0000000000 0000
Q ss_pred hhcccc--cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 299 HLMDSH--LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 299 ~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
...... .........+..+.++|.+||+.||.+||++.+++.+-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~ 281 (283)
T cd05118 236 SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHP 281 (283)
T ss_pred hhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCC
Confidence 000000 00011234567899999999999999999999999763
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=300.08 Aligned_cols=256 Identities=21% Similarity=0.248 Sum_probs=196.1
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcC---CCCccceeEEEEEeCCe----
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKL---RHKRLANLIGYCCDGDE---- 144 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~---- 144 (527)
++..||.|+||.||+|.+.. +++.||||+++...... ...+.+|+.+++++ +||||+++++++.....
T Consensus 3 ~~~~l~~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 3 ELAEIGEGAYGTVYKARDLN---TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred EEEEecccCceEEEEEEECC---CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 56778999999999999986 68899999997543322 34577788887766 59999999999988776
Q ss_pred -eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 145 -RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 145 -~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
.+++|||+.+ +|.+++.......+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceec
Confidence 9999999975 8999887544456899999999999999999999999 999999999999999999999999998765
Q ss_pred CCCC---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC-----
Q 009750 224 RDGK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK----- 295 (527)
Q Consensus 224 ~~~~---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 295 (527)
.... ...++..|+|||++.+..++.++|||||||++|||++|.+||.......... .........
T Consensus 158 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 230 (287)
T cd07838 158 SFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLD-------KIFDVIGLPSEEEW 230 (287)
T ss_pred cCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHH-------HHHHHcCCCChHhc
Confidence 4332 3346788999999998889999999999999999999998886543211000 000000000
Q ss_pred --cc---hhhcccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 296 --NI---LHLMDSHLE---GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 296 --~~---~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.. ......... .......+..+.+++.+||+.||.+||++.+++.|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 231 PRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00 000000000 01112345778899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=307.76 Aligned_cols=261 Identities=21% Similarity=0.279 Sum_probs=193.7
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcC-CCCccceeEEEEEeC--CeeeE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDG--DERLL 147 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~--~~~~l 147 (527)
.+.+.||.|+||.||+|.+.. +++.||||++.... ......+.+|+.+++++ +||||++++++|... ...++
T Consensus 10 ~~~~~lg~g~~~~v~~~~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 10 EILQKLGKGAYGIVWKAIDRR---TKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred HHhHhhcCCCCeeEEEEEEcC---CCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 356678999999999999886 77889999986532 22335678899999999 999999999998653 36899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+++ +|..++.. ..+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~-~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 87 VFEYMET-DLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred Eeccccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 9999974 99998853 37889999999999999999999999 999999999999999999999999998754322
Q ss_pred --------CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHHHh
Q 009750 227 --------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDMIR 293 (527)
Q Consensus 227 --------~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~ 293 (527)
....+|..|+|||++.+ ..++.++|||||||++|+|+||+.||.+.+......... ......+....
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence 12457889999998865 457889999999999999999999987543221000000 00000000000
Q ss_pred cCcchhhcccccC------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 294 GKNILHLMDSHLE------GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 294 ~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
......++..... .......+..+.++|.+||+.||.+|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000011110000 00111245678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=310.11 Aligned_cols=276 Identities=17% Similarity=0.205 Sum_probs=199.3
Q ss_pred cCHHHHHHHhcC-CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccc
Q 009750 57 FSLADLRAATNN-FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLA 133 (527)
Q Consensus 57 ~~~~~~~~~~~~-~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv 133 (527)
|+.+|+.+.+-. ...+.++..||+|+||.||+|.+.. +++.||||++...... ....+.+|+.+++.++||||+
T Consensus 1 ~~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 77 (342)
T cd07879 1 FYREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKR---TGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVI 77 (342)
T ss_pred CchhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCC---CCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCcc
Confidence 344555555422 2334467788999999999999876 7889999998754221 235688999999999999999
Q ss_pred eeEEEEEeCC------eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC
Q 009750 134 NLIGYCCDGD------ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (527)
Q Consensus 134 ~l~~~~~~~~------~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~ 207 (527)
++++++.... .+++|+||+.. +|..++. ..+++..+..++.||+.||.|||+.+ ++||||||+|||++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~ 151 (342)
T cd07879 78 GLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVN 151 (342)
T ss_pred chhheecccccCCCCceEEEEeccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEC
Confidence 9999987543 46999999964 7776652 36899999999999999999999999 99999999999999
Q ss_pred CCCCceeecccCccccCCC-CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc--
Q 009750 208 ENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK-- 283 (527)
Q Consensus 208 ~~~~~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~-- 283 (527)
.++.+||+|||+++..... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..........
T Consensus 152 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 231 (342)
T cd07879 152 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 231 (342)
T ss_pred CCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 9999999999998765433 23467888999999876 4588999999999999999999999976432110000000
Q ss_pred -ch-hhHHHHHhcCcchhhc---ccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 284 -FN-FGALDMIRGKNILHLM---DSHLEGNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 284 -~~-~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.. ................ .......+ ....+..+.+|+.+||+.||.+||++.+++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 232 GVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred CCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0000000000000000 00000000 01234568899999999999999999999987
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=311.94 Aligned_cols=264 Identities=21% Similarity=0.277 Sum_probs=201.4
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeCC-----ee
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD-----ER 145 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~ 145 (527)
.+.+.||.|+||.||+|.... +++.||||++.... ....+.+.+|+++++.++||||+++++++.... ..
T Consensus 3 ~i~~~ig~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 3 ELLKPIGSGAYGVVCSAVDKR---TGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred eeeeeecCCCCeEEEEEEeCC---CCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 466788999999999999876 78899999997654 233467999999999999999999999998775 78
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++||||+++ +|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||.|||++.++.++|+|||++.....
T Consensus 80 ~lv~e~~~~-~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 80 YIVTELMET-DLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEEecchhh-hHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 999999975 8999886 3458999999999999999999999999 99999999999999999999999999876544
Q ss_pred CC-------ccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHh
Q 009750 226 GK-------SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIR 293 (527)
Q Consensus 226 ~~-------~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~ 293 (527)
.. ...++..|+|||++.+. .++.++|||||||++|+|++|+.||...+.......... .....+....
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 235 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFIT 235 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcc
Confidence 32 34568889999999887 789999999999999999999999976542110000000 0000000000
Q ss_pred cCcchhhccc-ccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 294 GKNILHLMDS-HLEG-----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 294 ~~~~~~~~~~-~~~~-----~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.......+.. .... ......+..+.+++.+||+.+|.+|||+.+++.+-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 291 (330)
T cd07834 236 SEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY 291 (330)
T ss_pred ccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCcc
Confidence 0011111110 0000 011224567899999999999999999999998854
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=303.50 Aligned_cols=251 Identities=20% Similarity=0.257 Sum_probs=195.7
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 147 (527)
.++.++..||.|+||.||+|.+.. +++.||||.++..... ....+.+|+.++.++ .||||+++++++......++
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKK---TGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECC---CCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 345578889999999999999986 6889999999765432 234577788877777 59999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
||||+.+ +|..++.. ....+++..+..++.||+.||.|||+ .+ ++||||+|+||++++++.+||+|||++......
T Consensus 92 v~e~~~~-~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 92 CMELMST-CLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred EeeccCc-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9999854 77777754 34578999999999999999999997 47 999999999999999999999999998765432
Q ss_pred C---ccccCCccCCcccccCCc----CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 227 K---SYSTNLAYTPPEYLRNGR----VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 227 ~---~~~~t~~y~aPE~~~~~~----~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
. ...++..|+|||.+.+.. ++.++||||||+++|+|++|+.||....... .... .
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----------~~~~--------~ 230 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF----------EVLT--------K 230 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH----------HHHH--------H
Confidence 2 234678899999997653 7889999999999999999999985421100 0000 0
Q ss_pred hccccc-CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 300 LMDSHL-EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 300 ~~~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
++.... ........+..+.+|+.+||+.||.+||++.+++.+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 231 ILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred HhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 111100 000111245678999999999999999999999988653
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-38 Score=328.66 Aligned_cols=242 Identities=19% Similarity=0.225 Sum_probs=183.4
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEe-----------
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCD----------- 141 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----------- 141 (527)
.+..||+||||.||+++++- +|+.||||+|..... ..-..+.+|+++|.+|+|||||+++..+.+
T Consensus 483 EL~lLGkGGFG~VvkVRNKl---DGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~ 559 (1351)
T KOG1035|consen 483 ELELLGKGGFGSVVKVRNKL---DGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIV 559 (1351)
T ss_pred HHHHhcCCCCceEEEEeecc---cchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccc
Confidence 46667999999999999998 999999999986641 113468899999999999999999821000
Q ss_pred --------------------------------------------------------------------------------
Q 009750 142 -------------------------------------------------------------------------------- 141 (527)
Q Consensus 142 -------------------------------------------------------------------------------- 141 (527)
T Consensus 560 ~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~ 639 (1351)
T KOG1035|consen 560 ASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGS 639 (1351)
T ss_pred ccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCc
Confidence
Q ss_pred --------------------C--------CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCC
Q 009750 142 --------------------G--------DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR 193 (527)
Q Consensus 142 --------------------~--------~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ 193 (527)
+ -.+||-||||+..+|.+++..+.... .....++++++|++||.|+|++|
T Consensus 640 ~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH~~g- 717 (1351)
T KOG1035|consen 640 VILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIHDQG- 717 (1351)
T ss_pred cccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHHhCc-
Confidence 0 12578999999988888886322111 46778999999999999999999
Q ss_pred ccccccCCCceEeCCCCCceeecccCccccC----------------------CCCccccCCccCCcccccCCc---CCC
Q 009750 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----------------------DGKSYSTNLAYTPPEYLRNGR---VTP 248 (527)
Q Consensus 194 ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~----------------------~~~~~~~t~~y~aPE~~~~~~---~~~ 248 (527)
+|||||||.||+||++..|||+|||+|.... +.++.+||.-|+|||++.+.. |+.
T Consensus 718 iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~ 797 (1351)
T KOG1035|consen 718 IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNS 797 (1351)
T ss_pred eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccc
Confidence 9999999999999999999999999997611 113457899999999997754 999
Q ss_pred CcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC--CCCCHHHHHHHHHHHHHhcc
Q 009750 249 ESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE--GNFSSEEATVVFDLASRCLQ 326 (527)
Q Consensus 249 ~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~ 326 (527)
|+|+||||||++||+. ||.+.-.. ...+..+.+..+. ..+.....+.-..+|+++|+
T Consensus 798 KiDmYSLGIVlFEM~y---PF~TsMER------------------a~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 798 KIDMYSLGIVLFEMLY---PFGTSMER------------------ASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLS 856 (1351)
T ss_pred hhhhHHHHHHHHHHhc---cCCchHHH------------------HHHHHhcccCCCCCCcccccccchHHHHHHHHHhc
Confidence 9999999999999985 56543111 0111111111111 11233334445689999999
Q ss_pred cCCCCCCCHHHHHHH
Q 009750 327 YEPRERPNTKDLVST 341 (527)
Q Consensus 327 ~dp~~Rpt~~~vl~~ 341 (527)
.||.+|||+.++|..
T Consensus 857 hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 857 HDPSKRPTATELLNS 871 (1351)
T ss_pred CCCccCCCHHHHhhc
Confidence 999999999999874
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=294.47 Aligned_cols=225 Identities=23% Similarity=0.259 Sum_probs=183.2
Q ss_pred CCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCCCHhHH
Q 009750 81 KAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160 (527)
Q Consensus 81 G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~ 160 (527)
|.+|.||++.+.. +++.||+|+++... .+.+|...+....||||+++++++......++||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~---~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTR---TQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEcc---CCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 7899999999988 88899999997653 334455556666799999999999999999999999999999999
Q ss_pred hhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-CccccCCccCCcc
Q 009750 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPE 239 (527)
Q Consensus 161 l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~t~~y~aPE 239 (527)
+.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..|+|||
T Consensus 76 l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE 152 (237)
T cd05576 76 ISK--FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPE 152 (237)
T ss_pred HHH--hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCc
Confidence 863 356899999999999999999999999 999999999999999999999999987654433 2344567899999
Q ss_pred cccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHH
Q 009750 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 319 (527)
Q Consensus 240 ~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (527)
.+.+..++.++||||+||++|||++|+.|+...... . ........+...+..+.+
T Consensus 153 ~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------------~----~~~~~~~~~~~~~~~~~~ 207 (237)
T cd05576 153 VGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------------I----NTHTTLNIPEWVSEEARS 207 (237)
T ss_pred ccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------------c----ccccccCCcccCCHHHHH
Confidence 998888999999999999999999999876432100 0 000011123344567889
Q ss_pred HHHHhcccCCCCCCCH-----HHHHHH
Q 009750 320 LASRCLQYEPRERPNT-----KDLVST 341 (527)
Q Consensus 320 li~~cl~~dp~~Rpt~-----~~vl~~ 341 (527)
++.+||+.||++||++ ++++.|
T Consensus 208 li~~~l~~dp~~R~~~~~~~~~~~~~h 234 (237)
T cd05576 208 LLQQLLQFNPTERLGAGVAGVEDIKSH 234 (237)
T ss_pred HHHHHccCCHHHhcCCCccchHHHHcC
Confidence 9999999999999997 555544
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-38 Score=303.36 Aligned_cols=244 Identities=21% Similarity=0.260 Sum_probs=201.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~l 147 (527)
+.+.+.||.|+||.||+|.+.. +++.||||++...... ..+.+.+|++++.+++ ||||+++++++...+..++
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 79 (280)
T cd05581 3 FKFGKIIGEGSFSTVVLAKEKE---TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF 79 (280)
T ss_pred ceEeeeecCCCceEEEEEEEcC---CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence 4467788999999999999987 7889999998764322 2356889999999998 9999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 227 (527)
||||+++++|.+++. ....+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~l~--~~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 80 VLEYAPNGELLQYIR--KYGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 999999999999997 3457999999999999999999999999 9999999999999999999999999987543321
Q ss_pred ------------------------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc
Q 009750 228 ------------------------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 228 ------------------------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~ 283 (527)
...++..|+|||++.+..++.++||||||++++++++|+.||...+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------- 229 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL------- 229 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH-------
Confidence 2345788999999988889999999999999999999999986532100
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH----HHHHHHh
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT----KDLVSTL 342 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~----~~vl~~L 342 (527)
. ...+. .....++...++.+.+|+.+||+.+|.+||++ +++++|-
T Consensus 230 ----~--------~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~ 278 (280)
T cd05581 230 ----T--------FQKIL--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHP 278 (280)
T ss_pred ----H--------HHHHH--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCC
Confidence 0 00111 11122344446778999999999999999999 8888764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=301.91 Aligned_cols=252 Identities=20% Similarity=0.244 Sum_probs=198.4
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC----CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+.||.|++|.||++.......+++.||||++++... ...+.+.+|+.++.++ +||||+++++.+..+...++
T Consensus 3 ~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~l 82 (288)
T cd05583 3 ELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHL 82 (288)
T ss_pred eEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEE
Confidence 466788999999999998765444678899999875321 2235688999999999 69999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 227 (527)
||||+++|+|.+++. ....+++..+..++.|+++||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 83 v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (288)
T cd05583 83 ILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159 (288)
T ss_pred EEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence 999999999999986 3456899999999999999999999998 9999999999999999999999999987643321
Q ss_pred -----ccccCCccCCcccccCCc--CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 228 -----SYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~--~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
...++..|++||.+.+.. .+.++||||||+++|||++|..||...+.... ..... ..+
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----------~~~~~----~~~ 224 (288)
T cd05583 160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS-----------QSEIS----RRI 224 (288)
T ss_pred ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch-----------HHHHH----HHH
Confidence 235788999999987765 78899999999999999999999853211100 00000 001
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
... ....+...+..+.+++.+||+.||++|||+.++...|..
T Consensus 225 ~~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 225 LKS--KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred Hcc--CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 110 112333445678899999999999999998777665543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=306.84 Aligned_cols=274 Identities=18% Similarity=0.220 Sum_probs=200.8
Q ss_pred HHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEE
Q 009750 60 ADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIG 137 (527)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~ 137 (527)
.++...+++|. +++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.++++++||||+++++
T Consensus 10 ~~~~~~~~~y~---~~~~lg~G~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~ 83 (345)
T cd07877 10 KTIWEVPERYQ---NLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 83 (345)
T ss_pred HHHhhccCceE---EEEEeeecCCeEEEEEEEcC---CCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceee
Confidence 34444555554 67788999999999999876 788999999975432 22456889999999999999999999
Q ss_pred EEEeC------CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC
Q 009750 138 YCCDG------DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (527)
Q Consensus 138 ~~~~~------~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~ 211 (527)
++... ...+++++++ +++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.
T Consensus 84 ~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 84 VFTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred eeeecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCCC
Confidence 88643 3468888887 779998885 346899999999999999999999999 999999999999999999
Q ss_pred ceeecccCccccCCC-CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc----ccch
Q 009750 212 PRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP----IKFN 285 (527)
Q Consensus 212 ~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~----~~~~ 285 (527)
+||+|||++...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||+..+........ ....
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (345)
T cd07877 159 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 238 (345)
T ss_pred EEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999999998765443 23567889999999876 46888999999999999999999998754321100000 0000
Q ss_pred hhHHHHHhcC---cchhhcccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 286 FGALDMIRGK---NILHLMDSHLEGNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 286 ~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.......... .....+.......+ ....+..+.+||.+||+.||.+||++.+++.|-..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f 303 (345)
T cd07877 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 303 (345)
T ss_pred HHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhh
Confidence 0000000000 00000000000000 01134568899999999999999999999988543
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=302.90 Aligned_cols=255 Identities=23% Similarity=0.278 Sum_probs=193.4
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCC-------
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD------- 143 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------- 143 (527)
.+.+.||.|+||.||+|.... +++.||||+++.... .....+.+|+.++++++||||+++++++.+..
T Consensus 10 ~~~~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 10 DIIGQIGEGTYGQVYKARDKD---TGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred heeeeecccCCEEEEEEEECC---CCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 366778999999999999987 788899999975432 22356789999999999999999999987654
Q ss_pred ---eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCc
Q 009750 144 ---ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 144 ---~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
.+++||||+++ +|...+.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~ 163 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLA 163 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCccccc
Confidence 78999999986 77777753 2457899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCC-----ccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 221 KNSRDGK-----SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 221 ~~~~~~~-----~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
....... ...++..|+|||.+.+. .++.++|||||||++|||++|++||...+...... ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~-------~~~~~~~~ 236 (302)
T cd07864 164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLE-------LISRLCGS 236 (302)
T ss_pred ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH-------HHHHHhCC
Confidence 7654332 12447789999988654 47889999999999999999999886432211000 00000000
Q ss_pred C---cchhhc--------------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 295 K---NILHLM--------------DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 295 ~---~~~~~~--------------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
. ....+. ....... ....+..+.+++.+||+.||.+|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 000000 0000000 11235678999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=310.49 Aligned_cols=262 Identities=17% Similarity=0.175 Sum_probs=194.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeC---------
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG--------- 142 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--------- 142 (527)
+.+++.||.|+||.||+|.+.. +++.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 7 y~~~~~Lg~g~~g~vy~~~~~~---~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 7 YMDLRPLGCGSNGLVFSAVDSD---CDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred eEEEEEecCCCCEEEEEEEECC---CCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 4467788999999999999987 7889999999776655567899999999999999999999876543
Q ss_pred -----CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-CCCceeec
Q 009750 143 -----DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSC 216 (527)
Q Consensus 143 -----~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-~~~~kl~D 216 (527)
...++||||++ ++|.+++. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECC
Confidence 35789999997 48988884 346899999999999999999999999 999999999999974 56789999
Q ss_pred ccCccccCCC-------CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccc-----cccc
Q 009750 217 FGLMKNSRDG-------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNT-----VPIK 283 (527)
Q Consensus 217 FG~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~-----~~~~ 283 (527)
||++...... ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||.......... .+..
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV 238 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 9998754322 12346788999998755 457889999999999999999999996543211000 0000
Q ss_pred chhhHHHHHhcCcchhhcc-cccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 284 FNFGALDMIRGKNILHLMD-SHLEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
... ....... ....... ....... ....+..+.+|+.+||+.||.+|||+.+++.|-+
T Consensus 239 ~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~ 302 (342)
T cd07854 239 REE-DRNELLN-VIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPY 302 (342)
T ss_pred ChH-Hhhhhhh-hhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCc
Confidence 000 0000000 0000000 0000001 1123466889999999999999999999998744
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=304.12 Aligned_cols=268 Identities=22% Similarity=0.276 Sum_probs=198.8
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEe-
Q 009750 65 ATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCD- 141 (527)
Q Consensus 65 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~- 141 (527)
.+++|. ++..||.|+||.||++.+.. +++.||||++.+... ...+.+.+|+++++.++||||++++++|..
T Consensus 8 ~~~~y~---~~~~ig~g~~g~v~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 81 (328)
T cd07856 8 ITNRYV---DLQPVGMGAFGLVCSARDQL---TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP 81 (328)
T ss_pred cccceE---EEEeecccCCeEEEEEEECC---CCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence 444444 67788999999999999887 788999998865322 234678899999999999999999999876
Q ss_pred CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
....++||||+ +++|..++. ...+++..+..++.||++||.|||+.+ ++||||+|+|||++.++.+||+|||++.
T Consensus 82 ~~~~~lv~e~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 82 LEDIYFVTELL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred CCcEEEEeehh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCcccccc
Confidence 56789999999 568998884 346888899999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC-CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc----ccchhhHHHHHhcC
Q 009750 222 NSRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP----IKFNFGALDMIRGK 295 (527)
Q Consensus 222 ~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 295 (527)
..... ....++..|+|||.+.+ ..++.++|||||||++|+|+||+.||+..+........ ..............
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd07856 157 IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSE 236 (328)
T ss_pred ccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccch
Confidence 65433 34467888999999866 56899999999999999999999998764321000000 00000000000000
Q ss_pred cchhhccc-ccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 296 NILHLMDS-HLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 296 ~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
....++.. ......+ ...+..+.++|.+||+.+|++|||+.+++.+-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~ 290 (328)
T cd07856 237 NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290 (328)
T ss_pred hhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCc
Confidence 01111110 0011111 123467899999999999999999999988743
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=293.75 Aligned_cols=237 Identities=23% Similarity=0.268 Sum_probs=197.4
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
||.|+||.||++.... +++.||+|++...... ....+.+|+.++++++||||+++++.+..+...++||||+++
T Consensus 1 lg~G~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 77 (250)
T cd05123 1 LGKGSFGKVLLVRKKD---TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPG 77 (250)
T ss_pred CCCCCceEEEEEEECC---CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCC
Confidence 5999999999999976 7889999998765432 245789999999999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----Cccc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----KSYS 230 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~~~ 230 (527)
++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 78 ~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 78 GELFSHLS--KEGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 99999997 3446899999999999999999999998 999999999999999999999999998765432 2446
Q ss_pred cCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCC
Q 009750 231 TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310 (527)
Q Consensus 231 ~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (527)
++..|++||.+.+...+.++|+||||+++|+|++|+.||...+... . ...+.. ....++
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-----------~--------~~~~~~--~~~~~~ 213 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE-----------I--------YEKILK--DPLRFP 213 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-----------H--------HHHHhc--CCCCCC
Confidence 7889999999988888999999999999999999999986432100 0 001111 112234
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCH---HHHHHH
Q 009750 311 SEEATVVFDLASRCLQYEPRERPNT---KDLVST 341 (527)
Q Consensus 311 ~~~~~~~~~li~~cl~~dp~~Rpt~---~~vl~~ 341 (527)
...+..+.+++.+||..||.+||++ .+++.|
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 4446778999999999999999999 677665
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=307.06 Aligned_cols=264 Identities=15% Similarity=0.187 Sum_probs=196.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCC------
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGD------ 143 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------ 143 (527)
+.+++.||.|+||.||++.... +++.||||++...... ..+.+.+|+.+|++++||||+++++++....
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 17 YRDLKQVGSGAYGTVCSALDRR---TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred eEEEEEeeecCCeEEEEEEECC---CCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 4478889999999999999887 7889999998654322 2356889999999999999999999987653
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
..++||||+ +++|..++. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...
T Consensus 94 ~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 94 DFYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred eEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 358999999 779998884 357899999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc----ccchhhHHHHHhcCcc
Q 009750 224 RDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP----IKFNFGALDMIRGKNI 297 (527)
Q Consensus 224 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 297 (527)
... ....+++.|+|||++.+ ..++.++|+|||||++|+|++|+.||...+........ ................
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07880 169 DSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDA 248 (343)
T ss_pred ccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhH
Confidence 443 23467889999999876 45888999999999999999999998754321100000 0000000000000000
Q ss_pred hhhcc---cccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 298 LHLMD---SHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 298 ~~~~~---~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..... ..... ......+..+.+++.+||+.||.+|||+.+++.+-.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~ 300 (343)
T cd07880 249 KNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPY 300 (343)
T ss_pred HHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 00000 00000 011223456889999999999999999999998744
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=303.09 Aligned_cols=265 Identities=22% Similarity=0.261 Sum_probs=193.7
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCC----
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---- 143 (527)
..+.+++.||.|+||.||+|.+.. +++.||||++......+ ...+.+|+++++.++||||+++++++....
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIK---TGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECC---CCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 345578889999999999999987 78889999987543322 346789999999999999999999875433
Q ss_pred ----eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccC
Q 009750 144 ----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 144 ----~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
.+++||||+.+ +|...+.. ....+++..+..++.||++||.|||+.+ ++|+||||+|||+++++.+||+|||+
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCcc
Confidence 46999999975 77777753 3457999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCC---------------ccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc
Q 009750 220 MKNSRDGK---------------SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 220 a~~~~~~~---------------~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~ 283 (527)
+....... ...+++.|+|||.+.+. .++.++|||||||++|||++|++||.+.+..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87543221 12457789999988654 488999999999999999999999865432210000000
Q ss_pred c----hhhHHHHHhcCcchhhcccccCCCCC-------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 284 F----NFGALDMIRGKNILHLMDSHLEGNFS-------SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 284 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
. ....+.. ................+ ......+.+++.+||+.||.+|||+.+++.+-
T Consensus 242 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~ 309 (311)
T cd07866 242 LCGTPTEETWPG--WRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHP 309 (311)
T ss_pred HhCCCChhhchh--hhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCC
Confidence 0 0000000 00000000000000011 11235688999999999999999999998763
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=329.55 Aligned_cols=146 Identities=25% Similarity=0.266 Sum_probs=131.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.++..||.|+||.||+|.+.. +++.||||+++...... ...+.+|+.++..++||||+++++++.....+|
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 80 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKN---NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVY 80 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEE
Confidence 456688899999999999999987 78899999997654322 357899999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
|||||+++++|.+++. ....+++..++.|+.||+.||.|||..+ ||||||||+||||+.++.+||+|||+++
T Consensus 81 lVmEy~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 81 LVMEYLIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999999996 3456889999999999999999999998 9999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=295.04 Aligned_cols=244 Identities=16% Similarity=0.222 Sum_probs=194.1
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-----CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-----PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+.||.|+||.||++.+.. .+..+++|.++.... ....++.+|+.++++++||||+++++++.+....++
T Consensus 3 ~i~~~ig~g~~g~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 3 ILQQRLGKGSFGTVYLVKDKK---AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred eeeeeecCCCCceEEEEEecC---CCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEE
Confidence 456788999999999999876 444455565543221 223467789999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 148 VAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
||||+++++|.+++.. .....+++..++.++.|++.||.|||+.+ ++|+||||+||+++. +.+||+|||++.....
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCC
Confidence 9999999999998864 23457899999999999999999999999 999999999999975 5699999999876533
Q ss_pred C----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 226 G----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 226 ~----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
. ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||....... .. ..+.
T Consensus 158 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~-----------~~--------~~~~ 218 (260)
T cd08222 158 SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS-----------VV--------LRIV 218 (260)
T ss_pred CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----------HH--------HHHH
Confidence 2 23456788999999988888999999999999999999999985432110 00 0111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
. ......+...+..+.++|.+||..||.+||++.+++++
T Consensus 219 ~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 219 E-GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred c-CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 1 11122344566788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=296.64 Aligned_cols=263 Identities=21% Similarity=0.230 Sum_probs=198.6
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
++..||+|++|.||+|.... +++.||+|++.... ....+.+..|+.++++++|+||+++++++.+.+..++||||
T Consensus 3 ~~~~ig~g~~~~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 3 KLEKLGEGTYGVVYKARDKK---TGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred eehcccccCcceEEEeeecC---CCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 45678999999999999987 78899999998764 22346788999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
++ ++|.+++... ...+++..+..++.+++.||.|||+.+ ++||||+|+||++++++.+||+|||++.......
T Consensus 80 ~~-~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (282)
T cd07829 80 CD-MDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYT 156 (282)
T ss_pred cC-cCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccC
Confidence 97 4899999742 257999999999999999999999999 9999999999999999999999999987654332
Q ss_pred ccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHHHhcCc-chhhc
Q 009750 228 SYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDMIRGKN-ILHLM 301 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~ 301 (527)
....+..|+|||.+.+. .++.++|||||||++|||++|+.||............. ......+....... .....
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07829 157 HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF 236 (282)
T ss_pred ccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence 23456789999998776 78999999999999999999998886543211000000 00000000000000 00000
Q ss_pred ccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 302 DSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 302 ~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
...... ......+..+.+++.+||..||++||++.+++.+-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p 280 (282)
T cd07829 237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHP 280 (282)
T ss_pred cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCc
Confidence 000000 00011256789999999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=304.87 Aligned_cols=252 Identities=18% Similarity=0.188 Sum_probs=214.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
+++..++..||-|+||.|=++.... ....+|+|++++...-+ .+.+..|-.||...+.|.||++|..|.+...+
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~---~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNS---QKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecc---cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 3445577889999999999998875 33458999998775443 45688999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
||.||-|-||.|+..|+ ..+.++..++..++.-+++|++|||+++ ||+|||||+|.|||.+|-+||.|||+|+....
T Consensus 496 YmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999999998 6788999999999999999999999999 99999999999999999999999999998776
Q ss_pred CC---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 GK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 ~~---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
+. +++|||.|.|||++++...+.++|.||||+++|||++|.+||.+.+... ....|+.
T Consensus 573 g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk-------------------tYn~ILk 633 (732)
T KOG0614|consen 573 GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK-------------------TYNLILK 633 (732)
T ss_pred CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH-------------------HHHHHHh
Confidence 53 6799999999999999999999999999999999999999998764221 0111222
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhccc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLAPL 345 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~~~ 345 (527)
..-.-.+|...+....+||+++...+|.+|.. +.+|-+|-+..
T Consensus 634 Gid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~ 681 (732)
T KOG0614|consen 634 GIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFE 681 (732)
T ss_pred hhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhh
Confidence 22223467777788899999999999999975 78888887653
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=315.33 Aligned_cols=253 Identities=22% Similarity=0.293 Sum_probs=212.8
Q ss_pred ccccCCCCCCCeEEEEEecCC-CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDG-NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~-~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
..++||.|+||+||+|.+... ..-.-+||||++...... ..+++..|+-+|.+|+|||+++|+|+|.... +.||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 456789999999999988642 112346999998765433 3578999999999999999999999998655 8999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCccc-
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS- 230 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~- 230 (527)
+++|+|.++++. .+..+.....+.|..||++||.|||.+. +|||||-.+||||.+-.++||.|||+++.........
T Consensus 779 mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~ 856 (1177)
T KOG1025|consen 779 MPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS 856 (1177)
T ss_pred cccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence 999999999986 5667888999999999999999999998 9999999999999999999999999999876543221
Q ss_pred -----cCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 231 -----TNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 231 -----~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
..+.|||-|.+....|+.++|||||||++||++| |..|+.+.. ...+.+++...
T Consensus 857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~--------------------~~eI~dlle~g 916 (1177)
T KOG1025|consen 857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP--------------------AEEIPDLLEKG 916 (1177)
T ss_pred ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC--------------------HHHhhHHHhcc
Confidence 2467999999999999999999999999999999 888876532 23344555555
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
.+...|+.++.++..++.+||..|+..||+++++...+.++...+
T Consensus 917 eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 917 ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 556678888999999999999999999999999998887665443
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=308.51 Aligned_cols=265 Identities=20% Similarity=0.243 Sum_probs=198.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCe----
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE---- 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---- 144 (527)
.+.++..||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.....
T Consensus 16 ~y~~~~~ig~g~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 16 RYQNLSPVGSGAYGQVCSAFDTK---TGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ceEEEEEeccCCceEEEEEEECC---CCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 34577889999999999999987 788899999875421 223568889999999999999999998876554
Q ss_pred --eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 145 --RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 145 --~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
.++|+||+ +++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++..
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred ccEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEcccccccc
Confidence 89999999 669999985 357999999999999999999999999 99999999999999999999999999876
Q ss_pred cCCC-CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHhcCc
Q 009750 223 SRDG-KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIRGKN 296 (527)
Q Consensus 223 ~~~~-~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 296 (527)
.... ....++..|+|||.+.+. .++.++|||||||++|||++|+.||+..+.......... .............
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07851 168 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES 247 (343)
T ss_pred ccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence 5433 345678899999998653 578899999999999999999999875432110000000 0000000000000
Q ss_pred chhhcc---cccCCCCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 297 ILHLMD---SHLEGNFS---SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 297 ~~~~~~---~~~~~~~~---~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
....+. ......+. ...+..+.+++.+||+.||.+|||+.+++.|-+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~ 300 (343)
T cd07851 248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPY 300 (343)
T ss_pred HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCC
Confidence 000000 00001110 123567899999999999999999999998744
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=273.21 Aligned_cols=277 Identities=20% Similarity=0.211 Sum_probs=218.5
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CCccc
Q 009750 55 AEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLA 133 (527)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv 133 (527)
.-|+++.....+++-+++.+++++|+|.++.||.|.... +.+.++||+++.-. .+.+.+|+.||..|. ||||+
T Consensus 23 eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~---~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi 96 (338)
T KOG0668|consen 23 EYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINIT---NNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNII 96 (338)
T ss_pred hhcchhheeeeccccchHHHHHHHcCccHhhHhcccccC---CCceEEEeeechHH---HHHHHHHHHHHHhccCCCCee
Confidence 356777766677788888999999999999999999877 67789999998654 467999999999995 99999
Q ss_pred eeEEEEEeC--CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-
Q 009750 134 NLIGYCCDG--DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG- 210 (527)
Q Consensus 134 ~l~~~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~- 210 (527)
+|+++..+. ....||+||+.+.+...+. ..++.-++..++.++++||.|+|+.| |+|||+||.|+++|...
T Consensus 97 ~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~r 170 (338)
T KOG0668|consen 97 KLLDIVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELR 170 (338)
T ss_pred ehhhhhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhc
Confidence 999998765 4678999999998776655 35888899999999999999999999 99999999999999654
Q ss_pred CceeecccCccccCCCCcc---ccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchh
Q 009750 211 DPRLSCFGLMKNSRDGKSY---STNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNF 286 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~~~~---~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 286 (527)
.++|+|+|+|.+...+..+ +.+..|.-||.+..- .|+..-|+|||||+|..|+..+.||....++..+.+.+....
T Consensus 171 kLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVL 250 (338)
T KOG0668|consen 171 KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVL 250 (338)
T ss_pred eeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHh
Confidence 5999999999998877654 457889999999765 489999999999999999999999987766544433333222
Q ss_pred hHHHHH---------hcCcchhhcccccCCCCC--------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 287 GALDMI---------RGKNILHLMDSHLEGNFS--------SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 287 ~~~~~~---------~~~~~~~~~~~~~~~~~~--------~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
+..... -...+..++....+..+. .-.++++.+|+.++|..|-.+|+|+.|++.|-.
T Consensus 251 Gt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hpy 324 (338)
T KOG0668|consen 251 GTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPY 324 (338)
T ss_pred ChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCch
Confidence 221111 122233333333222211 112477889999999999999999999998854
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=301.50 Aligned_cols=266 Identities=20% Similarity=0.222 Sum_probs=193.5
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcC-CCCccceeEEEEEeC----Cee
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL-RHKRLANLIGYCCDG----DER 145 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~----~~~ 145 (527)
.+.+.||+|+||.||++...... .++.||||++...... ..+.+.+|+++++++ +||||+++++++... ...
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 3 ELIKELGQGAYGIVCSARNAETS-EEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred eEEEEccccCCeEEEEEEeCCCC-cCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 35677899999999999997621 2788999998753222 245788999999999 599999999976433 457
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++++||+. ++|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 82 YLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 89999986 58999886 4567899999999999999999999999 99999999999999999999999999875432
Q ss_pred C--------CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHHH
Q 009750 226 G--------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDMI 292 (527)
Q Consensus 226 ~--------~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~ 292 (527)
. ....+|..|+|||++.+ ..++.++|||||||++|+|++|+.||...+......... ..........
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 1 23467889999998866 468999999999999999999999987644211000000 0000000000
Q ss_pred hcCcchhh---cccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 293 RGKNILHL---MDSHLEGNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 293 ~~~~~~~~---~~~~~~~~~---~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
........ ........+ ....+..+.+|+.+||+.||.+|||+.+++.+=+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~ 294 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 00000000 000000000 1112467889999999999999999999987743
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=320.93 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=206.7
Q ss_pred ccCCCCCCCeEEEEEecCCCCC----ceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEE
Q 009750 76 SESGEKAPNVVYKGRLQDGNDN----RRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~----~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..||+|.||.|++|........ ...||||.++..... +.+.+..|+++|+.+ .|+|||.++|+|...+.+++|+
T Consensus 302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~ 381 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV 381 (609)
T ss_pred ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence 3679999999999986543212 567999999866543 356799999999999 7999999999999999999999
Q ss_pred EecCCCCHhHHhhhcC------C--------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceee
Q 009750 150 EYMPNDTLAKHLFHWE------N--------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~------~--------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~ 215 (527)
||+..|+|..+|++.+ . ..++..+.+.++.||+.|++||++.. +|||||-.+|||++++..+||+
T Consensus 382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kIa 460 (609)
T KOG0200|consen 382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKIA 460 (609)
T ss_pred EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEEc
Confidence 9999999999998643 0 13889999999999999999999998 9999999999999999999999
Q ss_pred cccCccccCCCCcc-----cc--CCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhh
Q 009750 216 CFGLMKNSRDGKSY-----ST--NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFG 287 (527)
Q Consensus 216 DFG~a~~~~~~~~~-----~~--t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 287 (527)
|||+++.......+ .+ ...|||||.+....|+.++|||||||+||||+| |..|+++-..
T Consensus 461 DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~------------- 527 (609)
T KOG0200|consen 461 DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP------------- 527 (609)
T ss_pred cccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-------------
Confidence 99999965443222 11 245999999999999999999999999999999 6677764110
Q ss_pred HHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 288 ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
...+.+.+....+...|..++.++.++++.||+.+|++||++.++.+.++...
T Consensus 528 ------~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 528 ------TEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred ------HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 11112234444455567777889999999999999999999999999998753
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=289.67 Aligned_cols=250 Identities=22% Similarity=0.302 Sum_probs=195.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC-CCCC------hHHHHHHHHHhhcCCCCccceeEEEEEe-CC
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH-AWPD------PKQFADEAWGVGKLRHKRLANLIGYCCD-GD 143 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~-~~~~------~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~ 143 (527)
+.++..||+|||+.||++.+.. ..++||||+-... .+.+ .+...+|..|.+.|+||.||++|++|.- ..
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~---EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLT---EQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHhccccHHHHHHhcccc---hhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 4456789999999999999986 6789999985432 2222 2457899999999999999999999964 46
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC-CccccccCCCceEeC---CCCCceeecccC
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFD---ENGDPRLSCFGL 219 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ivH~Dlkp~NIll~---~~~~~kl~DFG~ 219 (527)
.+|-|+|||+|.+|.-+|+ ....+++.+++.|+.||+.||.||.... +|||-||||.||||. ..|.+||+|||+
T Consensus 542 sFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 7899999999999999997 5567999999999999999999998865 799999999999994 457899999999
Q ss_pred ccccCCCC-----------ccccCCccCCcccccCC----cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccc
Q 009750 220 MKNSRDGK-----------SYSTNLAYTPPEYLRNG----RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKF 284 (527)
Q Consensus 220 a~~~~~~~-----------~~~~t~~y~aPE~~~~~----~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~ 284 (527)
++...+.+ ...||.+|++||++.-+ ..+.|+||||+|||+|..+.|+.||.....
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs---------- 689 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS---------- 689 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh----------
Confidence 98765432 34679999999998543 378899999999999999999999854311
Q ss_pred hhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 285 NFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.-+.+....+...-. +.-+..+..+.+..++|++||++.-++|....++..+
T Consensus 690 ---QQdILqeNTIlkAtE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 690 ---QQDILQENTILKATE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred ---HHHHHhhhchhccee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 001111122221111 1111224566788999999999999999988877654
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=289.40 Aligned_cols=263 Identities=21% Similarity=0.273 Sum_probs=196.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC--CCCccceeEEEEEeCC----ee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL--RHKRLANLIGYCCDGD----ER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~~----~~ 145 (527)
-.+++.+|+|.||.||+|.+. ++.||||++.... .+.|.+|-+|.+.. .|+||++++++-.... .+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-----~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-----NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-----CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 336777899999999999994 4889999997543 56799998888876 7999999999876554 79
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC--------CccccccCCCceEeCCCCCceeecc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG--------RPLYHDLNAYRVLFDENGDPRLSCF 217 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~--------~ivH~Dlkp~NIll~~~~~~kl~DF 217 (527)
+||+||.+.|+|.++|. ...++|....+|+..+++||+|||+.. +|+|||||..||||.+|++..|+||
T Consensus 284 wLVt~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred eEEeeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 99999999999999994 568999999999999999999999841 4999999999999999999999999
Q ss_pred cCccccCCCC------ccccCCccCCcccccCCc-CC-----CCcccchhhHHHHHHHhCCCCCCCCCccccccccccch
Q 009750 218 GLMKNSRDGK------SYSTNLAYTPPEYLRNGR-VT-----PESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 218 G~a~~~~~~~------~~~~t~~y~aPE~~~~~~-~~-----~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 285 (527)
|+|..+..+. ..+||.+|||||++.+.. +. .+.||||+|.|||||++.-.-+.... ......++...
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~-vp~Yqlpfe~e 439 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGP-VPEYQLPFEAE 439 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCC-CCcccCchhHH
Confidence 9998765432 468999999999997643 22 26899999999999999765432211 11111111100
Q ss_pred hhHHHHHhcCcchh-hcccccCCCCCHH-----HHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 286 FGALDMIRGKNILH-LMDSHLEGNFSSE-----EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 286 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
.+....+ +.+.. .+....++.++.. ....+++.+..||+.||+.|.|+.=|-+.+..+...
T Consensus 440 vG~hPt~--e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 440 VGNHPTL--EEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred hcCCCCH--HHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 0000000 01111 1222233333322 346688999999999999999998887777766543
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=308.66 Aligned_cols=246 Identities=17% Similarity=0.218 Sum_probs=206.4
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEe-----CCeee
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD-----GDERL 146 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~-----~~~~~ 146 (527)
.|+..||.|.+|.||+++.++ +++.+|||++...... .++...|..+|+.+ .|||++.++|++.. ++.++
T Consensus 22 ei~evig~Gtygkv~k~k~~~---~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW 97 (953)
T KOG0587|consen 22 EIIEVIGNGTYGKVYKGRHVK---TGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW 97 (953)
T ss_pred EEEEEEeeccceeEEEEeeee---cCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence 367778999999999999998 8899999998776533 36788899999999 79999999999864 46799
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
||||||.+|+.-++++......+.|..+..|++.++.||.+||.+. ++|||||-.|||++.++.+||+|||++.....+
T Consensus 98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT 176 (953)
T KOG0587|consen 98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST 176 (953)
T ss_pred EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence 9999999999999998777788999999999999999999999998 999999999999999999999999998765543
Q ss_pred ----CccccCCccCCcccccCC-----cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 227 ----KSYSTNLAYTPPEYLRNG-----RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~-----~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
.+.+|||.|||||++.-. .|+.++|+||||++..||--|.+|+.... .-..+
T Consensus 177 ~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH-------------------PmraL 237 (953)
T KOG0587|consen 177 VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH-------------------PMRAL 237 (953)
T ss_pred cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc-------------------hhhhh
Confidence 467899999999999643 37889999999999999999999874321 01111
Q ss_pred hhhc-ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 298 LHLM-DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 298 ~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
..|. ++.....-+...+..+.++|..||.+|-.+||++.++|+|-
T Consensus 238 F~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hp 283 (953)
T KOG0587|consen 238 FLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHP 283 (953)
T ss_pred ccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence 1111 11222223677889999999999999999999999998873
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=293.20 Aligned_cols=197 Identities=21% Similarity=0.221 Sum_probs=173.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+-...|+.||-|+||.|.+++-.+ +...+|+|.+++.+.-. ...+..|-+||..-+.+-||+||--|.+.+.+|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvD---T~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLY 705 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVD---TRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY 705 (1034)
T ss_pred cceEEEeeecccccceeEEEeecc---hhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceE
Confidence 334467889999999999999888 78889999998764322 345788999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC--
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR-- 224 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~-- 224 (527)
+||+|++||++-.+|- +.+-|.+..++.++.++..|+++.|..| +|||||||+|||||.+|++||+||||+.-+.
T Consensus 706 FVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999999987 5678999999999999999999999999 9999999999999999999999999975211
Q ss_pred -------CC-------------------------------------CccccCCccCCcccccCCcCCCCcccchhhHHHH
Q 009750 225 -------DG-------------------------------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLL 260 (527)
Q Consensus 225 -------~~-------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ 260 (527)
.+ ...+||+.|+|||++....++..+|+||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 00 0136799999999999999999999999999999
Q ss_pred HHHhCCCCCCCC
Q 009750 261 DLLSGKHIPPSH 272 (527)
Q Consensus 261 elltg~~p~~~~ 272 (527)
||+.|++||-..
T Consensus 863 em~~g~~pf~~~ 874 (1034)
T KOG0608|consen 863 EMLVGQPPFLAD 874 (1034)
T ss_pred HHhhCCCCccCC
Confidence 999999998554
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=273.90 Aligned_cols=243 Identities=18% Similarity=0.229 Sum_probs=200.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
+..++..||+|+|+.|..+++++ +.+.+|+|++++.-.. +..-++.|-.+.... +||.+|.+..+|..+..++
T Consensus 251 df~ll~vigrgsyakvl~~~~~~---t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 251 DFDLLRVIGRGSYAKVLLVRLKK---TDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred cceeeeeecCcchhhhhheehcc---cceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 34477888999999999999998 8899999999876433 344577888888777 7999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc---
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS--- 223 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~--- 223 (527)
+|.||++||+|--+++ +...++++.++.+...|+-||.|||+.| ||+||||..|+|+|..|++||+|+|+++..
T Consensus 328 fvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 9999999999988876 5677999999999999999999999999 999999999999999999999999998752
Q ss_pred -CCCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCC--CccccccccccchhhHHHHHhcCcchhh
Q 009750 224 -RDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH--DMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 224 -~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
...++++|||.|+|||++.+..|+..+|+|+|||+++||+.|+.||.-- +..+.++.... +.-+
T Consensus 405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedyl-------------fqvi 471 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYL-------------FQVI 471 (593)
T ss_pred CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHH-------------HHHH
Confidence 2346789999999999999999999999999999999999999999632 22222222111 1122
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN 334 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt 334 (527)
+...+ ..|...+.....+++.-|++||.+|..
T Consensus 472 lekqi--riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 472 LEKQI--RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred hhhcc--cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 22222 245555666778999999999999964
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=273.26 Aligned_cols=235 Identities=23% Similarity=0.320 Sum_probs=194.1
Q ss_pred CCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCCCHhHH
Q 009750 82 APNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKH 160 (527)
Q Consensus 82 ~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~ 160 (527)
+||.||+|.... +++.+|+|++....... .+.+.+|++++++++|+||+++++.+......+++|||+++++|.++
T Consensus 1 ~~g~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKK---TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECC---CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 578999999987 68899999998765544 67899999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---CccccCCccCC
Q 009750 161 LFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---KSYSTNLAYTP 237 (527)
Q Consensus 161 l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---~~~~~t~~y~a 237 (527)
+.. ...+++..++.++.+++.+|.|||+.+ ++|+||+|.||+++.++.++|+|||.+...... ....++..|++
T Consensus 78 ~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 154 (244)
T smart00220 78 LKK--RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMA 154 (244)
T ss_pred HHh--ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCC
Confidence 964 233899999999999999999999998 999999999999999999999999998876543 34567889999
Q ss_pred cccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCH--HHHH
Q 009750 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS--EEAT 315 (527)
Q Consensus 238 PE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 315 (527)
||.+.+..++.++||||||+++++|++|..||...+... .....+.......... ..+.
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 215 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-------------------ELFKKIGKPKPPFPPPEWKISP 215 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-------------------HHHHHHhccCCCCccccccCCH
Confidence 999988889999999999999999999999886421100 0011111110000001 1456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 316 VVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 316 ~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.+.+++.+||..+|.+||++.+++++
T Consensus 216 ~~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 216 EAKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHHHHccCCchhccCHHHHhhC
Confidence 78899999999999999999999874
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=271.52 Aligned_cols=261 Identities=19% Similarity=0.218 Sum_probs=197.9
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeC-----CeeeEEE
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG-----DERLLVA 149 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lv~ 149 (527)
.||.|+||.||.+++.. +|+.||+|++..-. ...-+++.+|+++|..++|.||+..++...-. .++|+|+
T Consensus 60 PIGYGAFGVVWsVTDPR---dgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 60 PIGYGAFGVVWSVTDPR---SGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred cccccceeEEEeccCCC---CccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 56999999999999988 89999999987542 12346899999999999999999999876533 3478999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
|.|.. +|..++. ..+.++...++-++.||++||.|||+.+ |+||||||.|.|++.|..+||||||+++......
T Consensus 137 ELmQS-DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~ 212 (449)
T KOG0664|consen 137 ELMQS-DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL 212 (449)
T ss_pred HHHHh-hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence 99965 8999887 6788999999999999999999999999 9999999999999999999999999998765442
Q ss_pred ---ccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccc----hhhHHHHHhcCcchh
Q 009750 228 ---SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKF----NFGALDMIRGKNILH 299 (527)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 299 (527)
..+.|.+|+|||+++|.. |+.+.||||+|||+.||+..+..|...........-... ...++...-.+....
T Consensus 213 hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H 292 (449)
T KOG0664|consen 213 NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNH 292 (449)
T ss_pred hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHH
Confidence 235588999999999865 999999999999999999988888765433211000000 000111111122223
Q ss_pred hcccccCCC-CC--------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 300 LMDSHLEGN-FS--------SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 300 ~~~~~~~~~-~~--------~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
++....+.+ ++ ....-+..++..++|..||.+|.+..+++.++..
T Consensus 293 ~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 293 VLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred hhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 333222211 11 1122345688899999999999999999988653
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-35 Score=249.19 Aligned_cols=194 Identities=18% Similarity=0.194 Sum_probs=166.3
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
.+.+||+|++|.|-+-++.. +|+..|+|++..... ...++..+|+.+..+- ..|.+|+++|........+|.||.
T Consensus 50 ~i~elGrGayG~vekmrh~~---sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQ---SGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhcCCccchhhheeecc---CCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 45688999999999999988 999999999986543 2245788899887776 799999999999999999999999
Q ss_pred cCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 152 MPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
|.- +|..+-++ ...+.+++.-+-+|+..|+.||.|||++-.+||||+||+|||++.+|++|+||||++-.+.+.-
T Consensus 127 M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAk 205 (282)
T KOG0984|consen 127 MDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAK 205 (282)
T ss_pred hhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHH
Confidence 965 78776653 2567899999999999999999999998669999999999999999999999999987765542
Q ss_pred c-cccCCccCCcccccC----CcCCCCcccchhhHHHHHHHhCCCCCCC
Q 009750 228 S-YSTNLAYTPPEYLRN----GRVTPESVIFSFGTVLLDLLSGKHIPPS 271 (527)
Q Consensus 228 ~-~~~t~~y~aPE~~~~----~~~~~~~DvwslGvvl~elltg~~p~~~ 271 (527)
+ ..|.-.|||||.+.. ..|+.++||||||++++||.+++.|++.
T Consensus 206 t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 206 TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 2 356778999999854 3589999999999999999999999753
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=272.55 Aligned_cols=249 Identities=23% Similarity=0.304 Sum_probs=191.1
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC--CCCccceeEEEEEeCC----eee
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL--RHKRLANLIGYCCDGD----ERL 146 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~~----~~~ 146 (527)
.+++.||+|.||.||+|.+. |+.||||++... ++..+.+|.+|.+.+ +|+||+.+++.-..+. .++
T Consensus 214 ~L~e~IGkGRyGEVwrG~wr-----Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 214 VLQEIIGKGRFGEVWRGRWR-----GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred EEEEEecCccccceeecccc-----CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 36778899999999999995 566999999754 356788999998876 9999999998754432 489
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC-----C--CccccccCCCceEeCCCCCceeecccC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-----G--RPLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~-----~--~ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
||++|-++|||+++|. ...++....++++..++.||++||.. | .|.|||||..|||+.+++..-|+|+|+
T Consensus 286 LvTdYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EeeecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 9999999999999995 47899999999999999999999973 2 389999999999999999999999999
Q ss_pred ccccCCC--------CccccCCccCCcccccCCc----CC--CCcccchhhHHHHHHHhC----------CCCCCCCCcc
Q 009750 220 MKNSRDG--------KSYSTNLAYTPPEYLRNGR----VT--PESVIFSFGTVLLDLLSG----------KHIPPSHDMV 275 (527)
Q Consensus 220 a~~~~~~--------~~~~~t~~y~aPE~~~~~~----~~--~~~DvwslGvvl~elltg----------~~p~~~~~~~ 275 (527)
|...... ...+||-+|||||++...- +. ..+||||||.|+||+... +.||..-
T Consensus 363 Av~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~--- 439 (513)
T KOG2052|consen 363 AVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV--- 439 (513)
T ss_pred eEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC---
Confidence 9765433 3458999999999996532 22 258999999999999753 2233211
Q ss_pred ccccccccchhhHHHHHhcCcchhhc-ccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 276 VWNTVPIKFNFGALDMIRGKNILHLM-DSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
++....+ +.+.+++ ...+++..| ......+.+|++-||..+|..|.|+-.+-+.|..+..
T Consensus 440 ----Vp~DPs~--------eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 440 ----VPSDPSF--------EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ----CCCCCCH--------HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 1111100 1111111 112222222 3456778899999999999999999999888887764
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=303.36 Aligned_cols=256 Identities=20% Similarity=0.214 Sum_probs=168.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCC----ceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEE------
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDN----RRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGY------ 138 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~----~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~------ 138 (527)
...+.+.+.||+|+||.||+|.+.. + +..||||++.... ..+.+..| .+....+.+++.++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~---~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVN---KQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcC---CccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 3445577789999999999999986 5 7889999986433 11222222 1222223333322221
Q ss_pred EEeCCeeeEEEEecCCCCHhHHhhhcCCC------------------CcCHHHHHHHHHHHHHHHHHhhhCCCccccccC
Q 009750 139 CCDGDERLLVAEYMPNDTLAKHLFHWENQ------------------TIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN 200 (527)
Q Consensus 139 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~------------------~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlk 200 (527)
+......+|||||+.+++|.+++...... ......+..++.||+.||.|||+.+ |+|||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLK 282 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVK 282 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCC
Confidence 23556789999999999999998642110 1123446689999999999999999 9999999
Q ss_pred CCceEeCC-CCCceeecccCccccCCC-----CccccCCccCCcccccCC----------------------cCCCCccc
Q 009750 201 AYRVLFDE-NGDPRLSCFGLMKNSRDG-----KSYSTNLAYTPPEYLRNG----------------------RVTPESVI 252 (527)
Q Consensus 201 p~NIll~~-~~~~kl~DFG~a~~~~~~-----~~~~~t~~y~aPE~~~~~----------------------~~~~~~Dv 252 (527)
|+|||++. ++.+||+|||+++..... ....+|+.|+|||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999985 589999999999764332 345778999999976432 23446799
Q ss_pred chhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc--Cc---chhhcccccCCC----C--CHHHHHHHHHHH
Q 009750 253 FSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG--KN---ILHLMDSHLEGN----F--SSEEATVVFDLA 321 (527)
Q Consensus 253 wslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~----~--~~~~~~~~~~li 321 (527)
||||||||||+++..++... ... ....+.. .. +...+....... + .........+|+
T Consensus 363 wSlGviL~el~~~~~~~~~~--~~~----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi 430 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSN--LIQ----------FNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELL 430 (566)
T ss_pred HHHHHHHHHHHhCcCCCchH--HHH----------HHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHH
Confidence 99999999999976543211 000 0000000 00 000111100000 0 001123456899
Q ss_pred HHhcccCCCCCCCHHHHHHHhcc
Q 009750 322 SRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 322 ~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.+||+.||++|||+.++++|-+.
T Consensus 431 ~~mL~~dP~kR~ta~e~L~Hpff 453 (566)
T PLN03225 431 KSMMRFKGRQRISAKAALAHPYF 453 (566)
T ss_pred HHHccCCcccCCCHHHHhCCcCc
Confidence 99999999999999999998554
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=281.24 Aligned_cols=267 Identities=18% Similarity=0.147 Sum_probs=203.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC------CCccceeEEEEEeCCe
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR------HKRLANLIGYCCDGDE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~------H~nIv~l~~~~~~~~~ 144 (527)
.|.+.+..|.|-|++|.+|.+.. .|..||||+|...... .+.=++|++||++|+ --|+++|+..|...++
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~---r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQA---RGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred eeEEEeccccceeeeeeeccccC---CCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 35677888999999999999987 6778999999865421 245678999999995 3589999999999999
Q ss_pred eeEEEEecCCCCHhHHhhh-cCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC-CCceeecccCccc
Q 009750 145 RLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKN 222 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~-~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~~ 222 (527)
+|||||-+ ..+|.++|.. ...-.|....+..++.|+.-||..|...+ |+|.||||.|||+++. ..+||||||.|..
T Consensus 509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCccccc
Confidence 99999998 4599999975 23456888899999999999999999999 9999999999999865 4689999999987
Q ss_pred cCCC--CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc--------------------
Q 009750 223 SRDG--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV-------------------- 280 (527)
Q Consensus 223 ~~~~--~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~-------------------- 280 (527)
..+. ..+..+..|.|||+++|.+|+...|+||+||+||||.||+..|++...+.....
T Consensus 587 ~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~d 666 (752)
T KOG0670|consen 587 ASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKD 666 (752)
T ss_pred cccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhh
Confidence 6654 355667889999999999999999999999999999999999998754311000
Q ss_pred -----cccchhhHHHHHhcCcchhhcc---c------ccC--CCCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 281 -----PIKFNFGALDMIRGKNILHLMD---S------HLE--GNFS---SEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 281 -----~~~~~~~~~~~~~~~~~~~~~~---~------~~~--~~~~---~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
...|.....+.+.......++. + .+. ..++ ......+.+|+.+||..||++|.|..++|+|
T Consensus 667 qHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 667 QHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred hhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 0000000000011111111100 0 000 0122 2345678999999999999999999999988
Q ss_pred hc
Q 009750 342 LA 343 (527)
Q Consensus 342 L~ 343 (527)
-.
T Consensus 747 pF 748 (752)
T KOG0670|consen 747 PF 748 (752)
T ss_pred Cc
Confidence 54
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=289.36 Aligned_cols=264 Identities=14% Similarity=0.142 Sum_probs=180.0
Q ss_pred ccccccCCCCCCCeEEEEEecCC-------------CCCceEEEEEEcCcCCCCChH--------------HHHHHHHHh
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDG-------------NDNRRWIAVKKFTKHAWPDPK--------------QFADEAWGV 124 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~-------------~~~~~~vAiK~~~~~~~~~~~--------------~~~~E~~~l 124 (527)
+.+..+||+|+||+||+|.+... ...++.||||++........+ .+..|+.++
T Consensus 147 F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l 226 (507)
T PLN03224 147 FQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMC 226 (507)
T ss_pred ceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHH
Confidence 34566789999999999975321 124567999998754332222 344577777
Q ss_pred hcCCCCcc-----ceeEEEEEe--------CCeeeEEEEecCCCCHhHHhhhcC----------------------CCCc
Q 009750 125 GKLRHKRL-----ANLIGYCCD--------GDERLLVAEYMPNDTLAKHLFHWE----------------------NQTI 169 (527)
Q Consensus 125 ~~l~H~nI-----v~l~~~~~~--------~~~~~lv~E~~~~g~L~~~l~~~~----------------------~~~l 169 (527)
.+++|.++ ++++++|.. .+..+|||||+++++|.+++.... ...+
T Consensus 227 ~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~ 306 (507)
T PLN03224 227 AKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKR 306 (507)
T ss_pred HHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccC
Confidence 77766554 677887753 356899999999999999986321 1134
Q ss_pred CHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---c--cccCCccCCcccccCC
Q 009750 170 EWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---S--YSTNLAYTPPEYLRNG 244 (527)
Q Consensus 170 ~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---~--~~~t~~y~aPE~~~~~ 244 (527)
++..++.++.|++.+|.|||+.+ |+||||||+|||++.++.+||+|||++....... . ..+|+.|+|||.+...
T Consensus 307 ~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~ 385 (507)
T PLN03224 307 DINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMP 385 (507)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCC
Confidence 67788999999999999999999 9999999999999999999999999987543322 1 2347899999988543
Q ss_pred c--------------------CC--CCcccchhhHHHHHHHhCCC-CCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 245 R--------------------VT--PESVIFSFGTVLLDLLSGKH-IPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 245 ~--------------------~~--~~~DvwslGvvl~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
. ++ .+.||||+|||+++|++|.. ||.............. ..... +....
T Consensus 386 ~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~---~~~~~-----~r~~~ 457 (507)
T PLN03224 386 QSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYD---NDLNR-----WRMYK 457 (507)
T ss_pred CCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhcc---chHHH-----HHhhc
Confidence 2 11 24799999999999999975 5432110000000000 00000 00000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHHhcc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEP---RERPNTKDLVSTLAP 344 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp---~~Rpt~~~vl~~L~~ 344 (527)
.....-......+....+|+.+||..+| .+|+|+.++|+|-+.
T Consensus 458 ~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f 503 (507)
T PLN03224 458 GQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF 503 (507)
T ss_pred ccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence 0111111122346778999999999876 689999999999765
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=290.97 Aligned_cols=241 Identities=24% Similarity=0.244 Sum_probs=183.1
Q ss_pred CCcccccccCCCCCCC-eEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPN-VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g-~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
|+...++ |.|+.| .||+|.. .|+.||||++-... ..-..+||.+|+.- .|||||++++.-.+....|
T Consensus 511 ~~~~eil---G~Gs~Gt~Vf~G~y-----e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~Y 579 (903)
T KOG1027|consen 511 FSPKEIL---GYGSNGTVVFRGVY-----EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLY 579 (903)
T ss_pred eccHHHc---ccCCCCcEEEEEee-----CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEE
Confidence 4444455 566555 4899999 56789999986543 34678999999999 7999999999988999999
Q ss_pred EEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC---C--CCceeecccC
Q 009750 147 LVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---N--GDPRLSCFGL 219 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~---~--~~~kl~DFG~ 219 (527)
|..|.|.. +|.+++... ..........+.++.|+++||++||+.+ ||||||||.||||+. + .+++|+|||+
T Consensus 580 IalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl 657 (903)
T KOG1027|consen 580 IALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGL 657 (903)
T ss_pred EEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEeccccc
Confidence 99999965 999999742 1111111345778999999999999998 999999999999975 3 4799999999
Q ss_pred ccccCCCC-------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhC-CCCCCCCCccccccccccchhhHHHH
Q 009750 220 MKNSRDGK-------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-KHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 220 a~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
++....+. +..||-+|+|||++....-+.++||||+|||+|+.++| .+||...-...- ..
T Consensus 658 sKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~------------NI 725 (903)
T KOG1027|consen 658 SKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA------------NI 725 (903)
T ss_pred ccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh------------hh
Confidence 98766542 34679999999999988888899999999999999997 788854311100 00
Q ss_pred Hh-cCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 292 IR-GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 292 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.. ...... +. ...++ .+.+||.+|+++||..||++.+||.|--
T Consensus 726 l~~~~~L~~-----L~--~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HPl 769 (903)
T KOG1027|consen 726 LTGNYTLVH-----LE--PLPDC--EAKDLISRMLNPDPQLRPSATDVLNHPL 769 (903)
T ss_pred hcCccceee-----ec--cCchH--HHHHHHHHhcCCCcccCCCHHHHhCCCc
Confidence 00 000111 00 01111 6889999999999999999999999843
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=265.70 Aligned_cols=137 Identities=19% Similarity=0.191 Sum_probs=116.8
Q ss_pred hcCCC--cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-----C---Ccccee
Q 009750 66 TNNFS--SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-----H---KRLANL 135 (527)
Q Consensus 66 ~~~~~--~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~nIv~l 135 (527)
.+.|. .|.++++||-|.|++||+|.+.. +.+.||+|+.+... .-.+..+.||++|++++ | ..||+|
T Consensus 72 GD~F~~gRY~v~rKLGWGHFSTVWLawDtq---~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~L 147 (590)
T KOG1290|consen 72 GDVFNGGRYHVQRKLGWGHFSTVWLAWDTQ---NKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQL 147 (590)
T ss_pred cccccCceEEEEEeccccccceeEEEeecc---CCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeee
Confidence 34454 46678899999999999999998 78999999986433 23466889999999993 3 369999
Q ss_pred EEEEEe----CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC
Q 009750 136 IGYCCD----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (527)
Q Consensus 136 ~~~~~~----~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~ 207 (527)
++.|.. +.++|||+|++ |.+|..+|....-+.++...++.|++||+.||.|||.+..|||.||||+|||+.
T Consensus 148 lD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 148 LDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 999975 45899999999 779999998777788999999999999999999999986699999999999994
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=257.57 Aligned_cols=259 Identities=18% Similarity=0.223 Sum_probs=195.6
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeC------Cee
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG------DER 145 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~ 145 (527)
-+..+|.|.- .|..+.+.- .++.||||++.... ....++..+|..++..++|+||++++.+|.-. ...
T Consensus 21 nL~p~~~g~~-~v~~a~D~v---~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 21 NLKPIGSGAQ-IVVAAFDQV---LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eecccCCCCc-eEEecchhh---ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 3556688877 677777766 77889999987542 23457899999999999999999999999754 357
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
|+|||+|.. +|.+.+. -.++-.++..|+.|++.|+.|||+.+ |+||||||+||++..++.+||.|||+|+....
T Consensus 97 y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 97 YLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred HHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCc
Confidence 999999965 8998886 34677888999999999999999999 99999999999999999999999999987655
Q ss_pred C---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccc-ccccccc-------hhh----HHH
Q 009750 226 G---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVW-NTVPIKF-------NFG----ALD 290 (527)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~-~~~~~~~-------~~~----~~~ 290 (527)
. +.++.|..|.|||++.+..+.+.+||||+||++.||++|...|++.+..+. ....... ... +..
T Consensus 171 ~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~ 250 (369)
T KOG0665|consen 171 DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRN 250 (369)
T ss_pred ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHH
Confidence 4 456788999999999998899999999999999999999999998754321 1000000 000 000
Q ss_pred HH------hcCcchhhcccc-cCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 291 MI------RGKNILHLMDSH-LEG--NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 291 ~~------~~~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.. ..-.+.+++... +.. ..+...+..+.+|+.+||..||++|.+++++|.|-
T Consensus 251 yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 251 YVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred HhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 00 001111111111 000 01112345578999999999999999999999983
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=257.36 Aligned_cols=249 Identities=19% Similarity=0.235 Sum_probs=201.4
Q ss_pred ccCCCCCCCeEEEEEecCCC--CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeC-CeeeEEEEe
Q 009750 76 SESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG-DERLLVAEY 151 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~--~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lv~E~ 151 (527)
..+-+|.||.||+|.+.+.. .+.+.|-+|.++....+ ....+..|.-++..+.|||+.++.+++.+. ...+.++.+
T Consensus 290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~ 369 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPA 369 (563)
T ss_pred hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEec
Confidence 34578999999999776421 13355778887765422 235688999999999999999999998764 568899999
Q ss_pred cCCCCHhHHhhh------cCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 152 MPNDTLAKHLFH------WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 152 ~~~g~L~~~l~~------~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
+.-|+|..+|+. ...+.++-.+...++.|++.|++|||+.+ |||.||..+|.+||+..++||+|=.+++..-.
T Consensus 370 ~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP 448 (563)
T KOG1024|consen 370 TGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRDLFP 448 (563)
T ss_pred cCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccccCc
Confidence 999999999972 12346778889999999999999999999 99999999999999999999999999987554
Q ss_pred CC-cccc-----CCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 226 GK-SYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 226 ~~-~~~~-----t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
.. ...| ...||+||.+.+..|+.++|||||||+||||+| |+.|+..-| ...+.
T Consensus 449 ~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID--------------------PfEm~ 508 (563)
T KOG1024|consen 449 GDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID--------------------PFEME 508 (563)
T ss_pred ccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC--------------------HHHHH
Confidence 42 2222 467999999999999999999999999999999 777764322 22334
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
..+....+..-|.+++.++..++..||..+|++||++++++.-|...
T Consensus 509 ~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 509 HYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred HHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 44445555556788899999999999999999999999999888654
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=280.30 Aligned_cols=250 Identities=18% Similarity=0.225 Sum_probs=206.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+++.+..+|.|++|.|||++++. +++..|||+++.....+..-++.|+-+++..+|||||.++|-+......+|+|
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~---s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKR---SGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred cchhheeeecCCcccchhhhcccc---cCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 356688899999999999999998 89999999999888777788999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC----C
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR----D 225 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~----~ 225 (527)
|||.+|+|.+.-+ -.+++++.++..+++..++||+|||+.+ -+|||||-.|||+++.|.+|++|||.+.... .
T Consensus 92 EycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~K 168 (829)
T KOG0576|consen 92 EYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK 168 (829)
T ss_pred EecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhh
Confidence 9999999998876 6688999999999999999999999999 8999999999999999999999999876544 3
Q ss_pred CCccccCCccCCcccc---cCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 GKSYSTNLAYTPPEYL---RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 ~~~~~~t~~y~aPE~~---~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
..++.||+.|||||+. ..+.|+..+|||++|++..|+---++|..... +..+.-+.....+ +
T Consensus 169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh-----------pmr~l~LmTkS~~----q 233 (829)
T KOG0576|consen 169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH-----------PMRALFLMTKSGF----Q 233 (829)
T ss_pred hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc-----------hHHHHHHhhccCC----C
Confidence 3578999999999987 45679999999999999999977776632110 0001111111110 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
+. ...-....++.+.+|++.||.++|++||+++.+|.|
T Consensus 234 pp-~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 234 PP-TLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred CC-cccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 00 111234456779999999999999999999988874
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.8e-33 Score=269.60 Aligned_cols=201 Identities=17% Similarity=0.184 Sum_probs=177.2
Q ss_pred HHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC------C--hHHHHHHHHHhhcCC---CCcc
Q 009750 64 AATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------D--PKQFADEAWGVGKLR---HKRL 132 (527)
Q Consensus 64 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~------~--~~~~~~E~~~l~~l~---H~nI 132 (527)
....+|+++..++.+|.|+||.|+.|.++. +...|+||.+.+...- + .-.+--||.||..|+ |+||
T Consensus 555 ~~~~k~s~yttlq~lG~GAyGkV~lai~K~---n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NI 631 (772)
T KOG1152|consen 555 KEYKKFSDYTTLQPLGEGAYGKVNLAIHKE---NNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENI 631 (772)
T ss_pred eeecccccceeeeeccccccceEEEeeecc---cceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccch
Confidence 344668888899999999999999999998 7888999999876431 1 124678999999997 9999
Q ss_pred ceeEEEEEeCCeeeEEEEec-CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC
Q 009750 133 ANLIGYCCDGDERLLVAEYM-PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211 (527)
Q Consensus 133 v~l~~~~~~~~~~~lv~E~~-~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~ 211 (527)
++++++|++++.+||+||-- +|-+|++++. .+..+++.++..|++||+.|+++||+.+ |||||||-+||.++.+|-
T Consensus 632 lKlLdfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~ 708 (772)
T KOG1152|consen 632 LKLLDFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGF 708 (772)
T ss_pred hhhhheeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCe
Confidence 99999999999999999964 4568999997 6778999999999999999999999999 999999999999999999
Q ss_pred ceeecccCccccC--CCCccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCC
Q 009750 212 PRLSCFGLMKNSR--DGKSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPP 270 (527)
Q Consensus 212 ~kl~DFG~a~~~~--~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~ 270 (527)
+||+|||.+.... ....++||..|.|||++.|.+| +..-|||++|++||.++....||.
T Consensus 709 ~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 709 VKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999987644 4467899999999999999887 556899999999999999888874
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=240.08 Aligned_cols=208 Identities=30% Similarity=0.402 Sum_probs=184.0
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCCC
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDT 156 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~ 156 (527)
||.|++|.||++.... +++.++||++...... ..+.+.+|+.+++.+.|++|+++++++......+++|||+++++
T Consensus 1 l~~g~~~~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKK---TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecC---CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 5899999999999976 6888999999866532 24679999999999999999999999999899999999999999
Q ss_pred HhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-CCCceeecccCccccCCC----Ccccc
Q 009750 157 LAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLMKNSRDG----KSYST 231 (527)
Q Consensus 157 L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~~~----~~~~~ 231 (527)
|.+++... ...+++..+..++.+++.+|.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ....+
T Consensus 78 l~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (215)
T cd00180 78 LKDLLKEN-EGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVG 155 (215)
T ss_pred HHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccC
Confidence 99999632 146899999999999999999999998 999999999999999 899999999998766543 33456
Q ss_pred CCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCC
Q 009750 232 NLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310 (527)
Q Consensus 232 t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (527)
...|++||.+... .++.++|+|++|+++++|
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 7889999999877 788999999999999998
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 311 SEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 311 ~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
..+.+++.+|+..||.+||++.++++++
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3477999999999999999999998764
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-32 Score=254.88 Aligned_cols=264 Identities=22% Similarity=0.290 Sum_probs=196.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.++.+||.|+|++||++.+......++.||+|.+.... ...++.+|+++|..+ .+.||+++.+++..++...+|||
T Consensus 38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp 115 (418)
T KOG1167|consen 38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP 115 (418)
T ss_pred hhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence 346778899999999999887533356889999987654 456899999999999 69999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC-CCceeecccCcccc------
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKNS------ 223 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~~~------ 223 (527)
|+++.+..++.. .++...+..+++.++.||.++|.+| ||||||||+|+|.+.. +.-.|.|||+|...
T Consensus 116 ~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~ 189 (418)
T KOG1167|consen 116 YFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT 189 (418)
T ss_pred ccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhhh
Confidence 999999988885 3678899999999999999999999 9999999999999754 67899999998610
Q ss_pred -----------CC--CC-----------------------------ccccCCccCCcccccCCc-CCCCcccchhhHHHH
Q 009750 224 -----------RD--GK-----------------------------SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLL 260 (527)
Q Consensus 224 -----------~~--~~-----------------------------~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~ 260 (527)
.. +. ...||++|.|||++...+ .++++||||.|||++
T Consensus 190 ~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~L 269 (418)
T KOG1167|consen 190 EHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILL 269 (418)
T ss_pred hhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceee
Confidence 00 00 124789999999997654 789999999999999
Q ss_pred HHHhCCCCCCCCCccccccccccchhhHHHH-----HhcC-------c----------chhh-cccccC--------CCC
Q 009750 261 DLLSGKHIPPSHDMVVWNTVPIKFNFGALDM-----IRGK-------N----------ILHL-MDSHLE--------GNF 309 (527)
Q Consensus 261 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-------~----------~~~~-~~~~~~--------~~~ 309 (527)
-+++++.||....+.......+-..++...+ ..+. + +..+ ...... ...
T Consensus 270 slls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~ 349 (418)
T KOG1167|consen 270 SLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIG 349 (418)
T ss_pred hhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccc
Confidence 9999999987654321111100000000000 0000 0 0000 000000 011
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 310 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 310 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
....+..+.+|+.+||..||.+|.|++++|+|-.
T Consensus 350 ~d~~~~~~~dlLdk~le~np~kRitAEeALkHpF 383 (418)
T KOG1167|consen 350 SDVFPALLLDLLDKCLELNPQKRITAEDALKHPF 383 (418)
T ss_pred cccccHHHHHHHHHHccCChhhcccHHHHhcCcC
Confidence 1122446889999999999999999999999854
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-31 Score=233.80 Aligned_cols=244 Identities=19% Similarity=0.223 Sum_probs=185.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEE-EEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGY-CCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~-~~~~~~~~lv 148 (527)
.+.|.+.+|+|-||.+-+++++. +.+.+++|.+.+.. ...++|.+|..---.| .|.||+.-|++ |...+.++++
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~---s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQ---SKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccC---CceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 35577889999999999999998 78889999987654 3467899998777777 68999998875 5666788999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe-C-CCCCceeecccCccccCCC
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF-D-ENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll-~-~~~~~kl~DFG~a~~~~~~ 226 (527)
+||++.|+|.+-+ ....+.+.....++.|+++||.|+|+++ +||||||.+|||| + +..++||||||+.+..+..
T Consensus 101 qE~aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 101 QEFAPRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred eccCccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 9999999999888 4567889999999999999999999999 9999999999999 3 3347999999998876654
Q ss_pred Ccc-ccCCccCCcccccCC-----cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 227 KSY-STNLAYTPPEYLRNG-----RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 227 ~~~-~~t~~y~aPE~~~~~-----~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
-.. .-+..|.+||..... ...+.+|||.||+|+|.++||..|+....... ..++.+..+.+.....+
T Consensus 177 V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d-------~~Y~~~~~w~~rk~~~~ 249 (378)
T KOG1345|consen 177 VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD-------KPYWEWEQWLKRKNPAL 249 (378)
T ss_pred ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC-------chHHHHHHHhcccCccC
Confidence 333 335679999977432 25788999999999999999999986432111 11122222222222211
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT 335 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~ 335 (527)
...| ...++.+..+.++-|..+|++|--.
T Consensus 250 -----P~~F-~~fs~~a~r~Fkk~lt~~~~drcki 278 (378)
T KOG1345|consen 250 -----PKKF-NPFSEKALRLFKKSLTPRFKDRCKI 278 (378)
T ss_pred -----chhh-cccCHHHHHHHHHhcCCcccccchh
Confidence 1111 1234557788899999999999433
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=237.45 Aligned_cols=192 Identities=27% Similarity=0.288 Sum_probs=170.7
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEec
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
+...||.|++|.||++.... +++.+|||.+...... ..+.+.+|++.+.+++|+||+++++++......++++||+
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKG---TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred eeeEeecCCCeEEEEEEEcC---CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 45677999999999999986 6788999999876544 5678999999999999999999999999989999999999
Q ss_pred CCCCHhHHhhhcCCCC-cCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-----
Q 009750 153 PNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----- 226 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~-l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----- 226 (527)
++++|.+++... .. +++..+..++.+++.+|.+||..+ ++|+||+|.||+++.++.++|+|||++......
T Consensus 80 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 80 EGGDLFDYLRKK--GGKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL 156 (225)
T ss_pred CCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence 999999999742 33 899999999999999999999998 999999999999999999999999998876544
Q ss_pred CccccCCccCCcccc-cCCcCCCCcccchhhHHHHHHHhCCCCCCC
Q 009750 227 KSYSTNLAYTPPEYL-RNGRVTPESVIFSFGTVLLDLLSGKHIPPS 271 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~-~~~~~~~~~DvwslGvvl~elltg~~p~~~ 271 (527)
....++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 345677889999998 666788899999999999999999999854
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-30 Score=282.79 Aligned_cols=194 Identities=16% Similarity=0.172 Sum_probs=143.3
Q ss_pred cCCC-CccceeEEEE-------EeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCcccc
Q 009750 126 KLRH-KRLANLIGYC-------CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197 (527)
Q Consensus 126 ~l~H-~nIv~l~~~~-------~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~ 197 (527)
.++| +||++++++| .....++++|||+ +++|.++|.. ....+++..++.++.||++||.|||+++ ||||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eeec
Confidence 4555 6888888887 2334678889998 5599999963 3456999999999999999999999999 9999
Q ss_pred ccCCCceEeCC-------------------CCCceeecccCccccCCC--------------------CccccCCccCCc
Q 009750 198 DLNAYRVLFDE-------------------NGDPRLSCFGLMKNSRDG--------------------KSYSTNLAYTPP 238 (527)
Q Consensus 198 Dlkp~NIll~~-------------------~~~~kl~DFG~a~~~~~~--------------------~~~~~t~~y~aP 238 (527)
||||+||||+. ++.+||+|||+++..... ....+|+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 456777777777542110 013568889999
Q ss_pred ccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHH
Q 009750 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF 318 (527)
Q Consensus 239 E~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (527)
|++.+..++.++|||||||+||||++|.+|+..... ...... ...+ .. ..........
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-------------~~~~~~----~~~~----~~-~~~~~~~~~~ 242 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-------------TMSSLR----HRVL----PP-QILLNWPKEA 242 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-------------HHHHHH----Hhhc----Ch-hhhhcCHHHH
Confidence 999999999999999999999999998877532100 000000 0001 11 1111233456
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 319 DLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 319 ~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
+++.+||+.||.+||++.++++|-..
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~h~~~ 268 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQSEFI 268 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhhchhh
Confidence 88999999999999999999987543
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-28 Score=217.74 Aligned_cols=168 Identities=15% Similarity=0.126 Sum_probs=127.7
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCccccCCc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 234 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~t~~ 234 (527)
|+|.+++.. ....+++..++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||++....... ..+|+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 689999974 3457999999999999999999999986 999999999999999 99988765433 367899
Q ss_pred cCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHH
Q 009750 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEA 314 (527)
Q Consensus 235 y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (527)
|||||++.+..++.++|||||||++|||+||+.||........ ........ ..... ......+....
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~----------~~~~~~~~-~~~~~--~~~~~~~~~~~ 136 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA----------ILEILLNG-MPADD--PRDRSNLESVS 136 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH----------HHHHHHHH-hccCC--ccccccHHHHH
Confidence 9999999999999999999999999999999999854321100 00000000 00000 00001122233
Q ss_pred H--HHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 315 T--VVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 315 ~--~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
. .+.+++.+||..||.+||++.++++++..+.
T Consensus 137 ~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 137 AARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 3 6899999999999999999999999987653
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-29 Score=221.97 Aligned_cols=253 Identities=19% Similarity=0.261 Sum_probs=203.0
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
++..+++-+|.....|..|+|++... -+++|++....... ..+|..|.-.|+.+.||||+.++|.|....++.
T Consensus 189 ~~~lnl~tkl~e~hsgelwrgrwqgn-----divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 189 VSSLNLITKLAESHSGELWRGRWQGN-----DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred hhhhhhhhhhccCCCcccccccccCc-----chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 34445666778888889999999753 26778776554333 357999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCcccc-ccCCCceEeCCCCCceeecccCccccCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~-Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++..||+.|+|+..|++...-..+-.++.+++.+|++|++|||+..+++-| .|....+++|++.+++|+ .+-+++.-.
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfq 342 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQ 342 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeee
Confidence 999999999999999876666678889999999999999999999878877 899999999999998886 222233233
Q ss_pred CCccccCCccCCcccccCCcC---CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 GKSYSTNLAYTPPEYLRNGRV---TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 ~~~~~~t~~y~aPE~~~~~~~---~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.....-.|.||+||.++..+- -.++|+|||.++||||.|...||...+.-+ --.++.-
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspme-------------------cgmkial 403 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME-------------------CGMKIAL 403 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh-------------------hhhhhhh
Confidence 333445789999999987663 347899999999999999999986432111 1123334
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
..++...|+..++.+..|+.-|+..||.+||.+..++-.|+.++
T Consensus 404 eglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 404 EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 45666778888899999999999999999999999999988764
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-26 Score=221.88 Aligned_cols=167 Identities=14% Similarity=0.026 Sum_probs=126.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---C--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---P--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+.+.+.||+|+||+||+|.+... +++.||||++..... . ..+.|.+|+++|++++|+||+..+.. .+..+
T Consensus 20 Y~~~~~IG~G~fg~Vy~a~~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~ 94 (365)
T PRK09188 20 FVETAVLKRDVFSTVERGYFAGD--PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDG 94 (365)
T ss_pred ceEccEEeecCcEEEEEEEEcCC--CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcE
Confidence 34667789999999999988642 467789998753311 1 13569999999999999999853322 24689
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCcccccc-CCCceEeCCCCCceeecccCccccCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL-NAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dl-kp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
|||||++|++|.. +. ... ...++.+++++|.|||+.+ |+|||| ||+|||++.++.+||+|||+++....
T Consensus 95 LVmE~~~G~~L~~-~~--~~~------~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 95 LVRGWTEGVPLHL-AR--PHG------DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred EEEEccCCCCHHH-hC--ccc------hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 9999999999973 21 111 1467899999999999999 999999 99999999999999999999986543
Q ss_pred CC------------ccccCCccCCcccccCCc------CCCCcccc
Q 009750 226 GK------------SYSTNLAYTPPEYLRNGR------VTPESVIF 253 (527)
Q Consensus 226 ~~------------~~~~t~~y~aPE~~~~~~------~~~~~Dvw 253 (527)
.. ...+++.|++||.+.-.. .+..+|-|
T Consensus 165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 165 RGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred CcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 21 234677899999986432 33446666
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=213.36 Aligned_cols=257 Identities=17% Similarity=0.125 Sum_probs=196.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCC----CccceeEEEE-EeCCee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH----KRLANLIGYC-CDGDER 145 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~-~~~~~~ 145 (527)
.+.+.+.||+|+||.||.|.+.... .+.+|+|............+..|+.++..+.. +++..+++.. ......
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~--~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEK--NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCC--CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 4568889999999999999988632 46789998876544333378899999999973 6899999998 577789
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC-----CCceeecccCc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-----GDPRLSCFGLM 220 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~-----~~~kl~DFG~a 220 (527)
+|||+.+ |.+|.++......+.++..+++.|+.|++.+|.+||+.| ++||||||+|+++... ..+.|.|||++
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 9999999 789999886545678999999999999999999999999 9999999999999865 35999999999
Q ss_pred c--ccC-C-----------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchh
Q 009750 221 K--NSR-D-----------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNF 286 (527)
Q Consensus 221 ~--~~~-~-----------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 286 (527)
+ ... . ...+.||..|.++.+..+...+.+.|+||++.++.|++.|..|+........
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~--------- 245 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL--------- 245 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch---------
Confidence 8 311 1 1124589999999999999999999999999999999999988754432110
Q ss_pred hHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
...+........... +....+..+..+...+-..+...+|....+...|.....
T Consensus 246 --~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 246 --KSKFEKDPRKLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred --HHHHHHHhhhhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 000000000000000 112233456667677777899999999999888776543
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-23 Score=204.44 Aligned_cols=254 Identities=24% Similarity=0.280 Sum_probs=193.1
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCC-ccceeEEEEEeCCeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHK-RLANLIGYCCDGDERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~-nIv~l~~~~~~~~~~~lv 148 (527)
.+...||.|+||.||++.+. ..+++|.+....... ...+.+|+.++..+.|+ +|+++++++......+++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 76 (384)
T COG0515 3 RILRKLGEGSFGEVYLARDR------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLV 76 (384)
T ss_pred eeEEeecCCCCeEEEEEEec------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEE
Confidence 35667899999999999986 458999998765443 56799999999999988 799999999777778999
Q ss_pred EEecCCCCHhHHhhhcCC-CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-CceeecccCccccCC-
Q 009750 149 AEYMPNDTLAKHLFHWEN-QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRD- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~~- 225 (527)
++++.+++|.+++..... ..++......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||+++....
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 999999999977753211 27899999999999999999999999 99999999999999998 799999999875432
Q ss_pred ---------CCccccCCccCCcccccC---CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 226 ---------GKSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 226 ---------~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
.....+|..|++||.+.+ ..++...|+||+|++++++++|..||...... ...........
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-------~~~~~~~~~~~ 228 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-------SATSQTLKIIL 228 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-------ccHHHHHHHHH
Confidence 245578999999999987 57888999999999999999999996543211 00000111111
Q ss_pred cCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..... .................+.+++..|+..+|..|.+..+....
T Consensus 229 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 229 ELPTP-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred hcCCc-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11000 000000000001223567899999999999999998887765
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-24 Score=187.22 Aligned_cols=194 Identities=17% Similarity=0.132 Sum_probs=167.1
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCC-CccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH-KRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.++++||.|+||.+|.|.... +|..||||+-+.... ..++..|.++.+.|+| ..|..+..+..+.....|||
T Consensus 16 ky~lvrkiGsGSFGdIy~~~~i~---~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 16 KYKLVRKIGSGSFGDIYLGISIT---SGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred ceEEEEeecCCchhheeeeeecc---CCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 46688999999999999999987 899999998765543 3478899999999965 67888888888888999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC---CCceeecccCccccCCC
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~a~~~~~~ 226 (527)
+.+ |.+|.+++.- ....++..+++-++-|++.-++|+|.++ .|||||||+|+|..-+ ..+.|+|||+++...+.
T Consensus 91 dLL-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred ecc-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 999 8899998864 5678999999999999999999999999 9999999999999643 45899999999875543
Q ss_pred -----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCC
Q 009750 227 -----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH 272 (527)
Q Consensus 227 -----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~ 272 (527)
....||..|.+--...+...+.+-|+=|+|.+|..+.-|..||.+.
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 3456788999888777777888999999999999999999998764
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-25 Score=219.46 Aligned_cols=228 Identities=19% Similarity=0.197 Sum_probs=193.2
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEEEEecCC
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
+|.|+||.|+.++-..+...++.+|+|++++..... ......|..++..++ ||.+|++.-.+..+...+++++|..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 599999999988777776688999999998654322 225566888888886 99999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCccccCCc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 234 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~t~~ 234 (527)
|+|...+. ....+.+.....+...++-+++++|..+ ++|||+|++||+++.+|++|+.|||+++..-+....+||..
T Consensus 82 g~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 82 GDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred chhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 99999886 4566788888889999999999999999 99999999999999999999999999998776666699999
Q ss_pred cCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHH
Q 009750 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEA 314 (527)
Q Consensus 235 y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (527)
|||||++. ....++|+||||++++||+||..||.+. ....|+. .....|...+
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~-----------------------~~~~Il~--~~~~~p~~l~ 211 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD-----------------------TMKRILK--AELEMPRELS 211 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH-----------------------HHHHHhh--hccCCchhhh
Confidence 99999997 6677899999999999999999998531 1111221 1234678888
Q ss_pred HHHHHHHHHhcccCCCCCCCH
Q 009750 315 TVVFDLASRCLQYEPRERPNT 335 (527)
Q Consensus 315 ~~~~~li~~cl~~dp~~Rpt~ 335 (527)
..+.+++..++..+|..|.-.
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhcc
Confidence 899999999999999999654
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.4e-25 Score=228.78 Aligned_cols=251 Identities=16% Similarity=0.119 Sum_probs=184.0
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC--CCCCh----HHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH--AWPDP----KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~--~~~~~----~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
...+|.|++|.|+...... ..+.++.|..... ..... ..+..|..+-..|.|||++..+..+.+.....-+
T Consensus 323 ~~~~g~ga~g~~~~~~~~~---~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRS---DLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred cceeeecccCceEEEEecC---CCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence 3456999999888777665 3344555544311 11111 1266788888999999998888877776666666
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC---
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--- 225 (527)
||||++ +|+.++. ....+...++-.++.|++.||.|+|+.| +.||||||+|++++.+|.+||+|||.+....-
T Consensus 400 mE~~~~-Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhcccH-HHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 999999 9999996 3357888999999999999999999999 99999999999999999999999998865332
Q ss_pred -----CCccccCCccCCcccccCCcCCC-CcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 226 -----GKSYSTNLAYTPPEYLRNGRVTP-ESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 226 -----~~~~~~t~~y~aPE~~~~~~~~~-~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
....+|+-.|+|||++.+..|++ ..||||.|++++.|++|+.||.......... .. ........
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---------~~-~~~~~~~~ 545 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---------KT-NNYSDQRN 545 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch---------hh-hccccccc
Confidence 13457889999999999999877 5799999999999999999875332111000 00 00000000
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
+.. -........+.....+|.++|+.||.+|.|+++|++.=|.
T Consensus 546 ~~~--~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~ 588 (601)
T KOG0590|consen 546 IFE--GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWI 588 (601)
T ss_pred ccc--ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHh
Confidence 000 0001223456678899999999999999999999986553
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.4e-24 Score=191.20 Aligned_cols=140 Identities=14% Similarity=0.128 Sum_probs=109.9
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--C-------hHH-----------------HHHHHHHhhcCC
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--D-------PKQ-----------------FADEAWGVGKLR 128 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~ 128 (527)
.+.||+|+||.||+|.+. +|+.||||+++..... . ... ..+|+.++.++.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~----~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05147 2 NGCISTGKEANVYHATTA----NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV 77 (190)
T ss_pred CCccccccceEEEEEECC----CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999986 6788999999764321 1 112 235999999998
Q ss_pred CCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHh-hhCCCccccccCCCceEeC
Q 009750 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFD 207 (527)
Q Consensus 129 H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~l-H~~~~ivH~Dlkp~NIll~ 207 (527)
+++|.....+.. ...+|||||++|++|...+. ....+++..+..++.|++.+|.|+ |+.+ |+||||||+|||++
T Consensus 78 ~~~v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~ 152 (190)
T cd05147 78 TAGIPCPEPILL--KSHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH 152 (190)
T ss_pred HCCCCCCcEEEe--cCCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE
Confidence 887644433322 22489999999887765533 345789999999999999999999 6888 99999999999998
Q ss_pred CCCCceeecccCccccC
Q 009750 208 ENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 208 ~~~~~kl~DFG~a~~~~ 224 (527)
++.++|+|||++....
T Consensus 153 -~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 -DGKLYIIDVSQSVEHD 168 (190)
T ss_pred -CCcEEEEEccccccCC
Confidence 5789999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=190.46 Aligned_cols=194 Identities=18% Similarity=0.213 Sum_probs=169.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+.++||+|+||..+.|++.- +++.||||.-...+ ..-++..|....+.| ..++|..++-+..++.+..||||
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~---nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLY---NNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred ceeccccccCcceeeecccccc---cCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 3467789999999999999987 88999999865544 234788888888888 57999999999888889999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-----CceeecccCccccCC
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-----DPRLSCFGLMKNSRD 225 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-----~~kl~DFG~a~~~~~ 225 (527)
++ |.+|++++. .....++..++.-++.|++.-++|+|++. +|+|||||+|+||..-+ .+.|+|||+|+...+
T Consensus 105 LL-GPSLEDLFD-~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 105 LL-GPSLEDLFD-LCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hh-CcCHHHHHH-HhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 99 889998874 46788999999999999999999999999 99999999999997543 589999999987554
Q ss_pred C-----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCC
Q 009750 226 G-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHD 273 (527)
Q Consensus 226 ~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~ 273 (527)
. .+..||..||+--..+|...+.+-|+=|||-|++..|-|..||.+..
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 3 35678999999999999999999999999999999999999998754
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-23 Score=190.43 Aligned_cols=167 Identities=14% Similarity=0.067 Sum_probs=129.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHH---------HHHHHHHhhcCCCCccceeEEEEEeC
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---------FADEAWGVGKLRHKRLANLIGYCCDG 142 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~---------~~~E~~~l~~l~H~nIv~l~~~~~~~ 142 (527)
+.+++.+|.|+||.||.... ++..+|||++.......... +.+|+..+.++.|++|..+.+++...
T Consensus 33 y~~~~~l~~~~f~~v~l~~~-----~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 33 IKTIKVFRNIDDTKVSLIDT-----DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred eEEEEEecCCCceEEEEEec-----CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 44677889999999998654 23459999998665433322 68999999999999999999987643
Q ss_pred --------CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCcee
Q 009750 143 --------DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRL 214 (527)
Q Consensus 143 --------~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl 214 (527)
...+|||||++|.+|.++.. ++. ....+|+.+|..+|+.| ++|||+||+||+++.+| ++|
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~l 175 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRI 175 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEE
Confidence 35789999999999988742 232 24569999999999999 99999999999999988 999
Q ss_pred ecccCccccCCCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHH
Q 009750 215 SCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLL 263 (527)
Q Consensus 215 ~DFG~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ell 263 (527)
+|||........... ..+++...++.++|+||||+++.-+.
T Consensus 176 iDfg~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 176 IDLSGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EECCCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 999987655332211 11344555778999999999887653
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=184.02 Aligned_cols=142 Identities=15% Similarity=0.166 Sum_probs=112.9
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---------------------C-----hHHHHHHHHHhhcC
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---------------------D-----PKQFADEAWGVGKL 127 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l 127 (527)
+.+.||+|+||.||+|.+. +|+.||||+++..... . ...+.+|...+.++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~----~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 76 (190)
T cd05145 1 INGCISTGKEANVYHARTG----DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL 76 (190)
T ss_pred CCceeecCCCcEEEEEEcC----CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 3567899999999999976 6788999999865321 0 11246899999999
Q ss_pred CCCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEe
Q 009750 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLF 206 (527)
Q Consensus 128 ~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll 206 (527)
.|++|.....+... ..+|||||++|+++..... ....++......++.|++.+|.++|+ .| |+||||||+|||+
T Consensus 77 ~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll 151 (190)
T cd05145 77 YEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILY 151 (190)
T ss_pred HhCCCCCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEE
Confidence 99988655544433 2489999999886544322 23567888999999999999999999 88 9999999999999
Q ss_pred CCCCCceeecccCccccCC
Q 009750 207 DENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 207 ~~~~~~kl~DFG~a~~~~~ 225 (527)
+ ++.++|+|||++.....
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 9 88999999999976554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-22 Score=176.45 Aligned_cols=180 Identities=16% Similarity=0.113 Sum_probs=137.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC----hHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD----PKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~----~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv 148 (527)
+...|++|+||+||.+.. .+..++.+.+.....-. ...|.+|+++|++|. |++|++++++ ...+++
T Consensus 6 ~~~~l~~~~f~~v~~~~~-----~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lv 76 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-----GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLD 76 (218)
T ss_pred cceeecCCCcceEEEeec-----CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEE
Confidence 445679999999996655 34567777776554311 125889999999994 5889999886 346999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCcccccc-CCCceEeCCCCCceeecccCccccCCCC
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL-NAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dl-kp~NIll~~~~~~kl~DFG~a~~~~~~~ 227 (527)
|||++|.+|...+.. ....++.|++.+|.++|+.| |+|||| ||+|||++.++.++|+|||++.......
T Consensus 77 meyI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 77 RSYLAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred EeeecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999999998765421 11357889999999999999 999999 7999999999999999999998654432
Q ss_pred c-----------------cccCCccCCcccccCC-cCC-CCcccchhhHHHHHHHhCCCCCCCC
Q 009750 228 S-----------------YSTNLAYTPPEYLRNG-RVT-PESVIFSFGTVLLDLLSGKHIPPSH 272 (527)
Q Consensus 228 ~-----------------~~~t~~y~aPE~~~~~-~~~-~~~DvwslGvvl~elltg~~p~~~~ 272 (527)
. ...++.|++|+...-. ..+ ...++++-|+-+|.++|++.++.++
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 1 0136778888755332 233 5678999999999999999887554
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-23 Score=215.79 Aligned_cols=243 Identities=18% Similarity=0.233 Sum_probs=176.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC-CCChHHHHHHHHH--hhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWG--VGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
....+.||++.|=.|.+|++.. |. |+||++-+.. ..+.+.|.++++- ...++|||++.+.-+-+.....|||
T Consensus 25 ~~~~~~LGstRFlKv~r~k~~e----G~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 25 CHYVENLGSTRFLKVARAKDRE----GL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred eeeecccCchhhhhhhhccCCC----ce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHH
Confidence 3356678999999999999974 44 8999986554 3344444443333 4444899999999888888888999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc---CC
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS---RD 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~---~~ 225 (527)
-+|+.+ +|++.|. .+.-+...+.+.|+.||+.||..+|..| |+|+|||.+||||+.-..+.|+||...+.. .+
T Consensus 100 Rqyvkh-nLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHhh-hhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 999977 9999995 4556788889999999999999999999 999999999999999999999999866531 11
Q ss_pred CC----ccc----cCCccCCcccccCC----------c-CCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccch
Q 009750 226 GK----SYS----TNLAYTPPEYLRNG----------R-VTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 226 ~~----~~~----~t~~y~aPE~~~~~----------~-~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 285 (527)
.. -+. ....|+|||.+... + .+++-||||+||++.||++ |++||.......+
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aY-------- 247 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAY-------- 247 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhH--------
Confidence 11 111 12469999988431 2 5678999999999999998 6777742210000
Q ss_pred hhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...........+... ....+..|+..|++.||.+|.++++.|+.-.
T Consensus 248 ----r~~~~~~~e~~Le~I--------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 248 ----RSGNADDPEQLLEKI--------EDVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred ----hccCccCHHHHHHhC--------cCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 000000011111110 1125789999999999999999999998743
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-22 Score=188.11 Aligned_cols=228 Identities=18% Similarity=0.157 Sum_probs=151.0
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCC----------CccceeEEEEE-
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRH----------KRLANLIGYCC- 140 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H----------~nIv~l~~~~~- 140 (527)
.+.||.|+++.||.+++.. +++.+|||+....... ..+++.+|.-....+.+ -.++-.++...
T Consensus 17 ~~~i~~g~~~~v~~v~d~~---t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVE---TGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEETTEEEEEEEETT---TTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred ccccccCCceEEEEEEEcc---CCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 3467999999999999998 8899999998654422 24567777766666433 22333333222
Q ss_pred --------eCC--------eeeEEEEecCCCCHhHHhhh---cCC--CCcCHHHHHHHHHHHHHHHHHhhhCCCcccccc
Q 009750 141 --------DGD--------ERLLVAEYMPNDTLAKHLFH---WEN--QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199 (527)
Q Consensus 141 --------~~~--------~~~lv~E~~~~g~L~~~l~~---~~~--~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dl 199 (527)
... +.+++|+-+.+ ||.+++.- ... ..+....++.+..|+++.+++||+.| +||+||
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi 171 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDI 171 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-
T ss_pred cCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEeccc
Confidence 111 24778888854 88887642 111 23445566778899999999999999 999999
Q ss_pred CCCceEeCCCCCceeecccCccccCCCCc-cccCCccCCcccccC--------CcCCCCcccchhhHHHHHHHhCCCCCC
Q 009750 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKS-YSTNLAYTPPEYLRN--------GRVTPESVIFSFGTVLLDLLSGKHIPP 270 (527)
Q Consensus 200 kp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~t~~y~aPE~~~~--------~~~~~~~DvwslGvvl~elltg~~p~~ 270 (527)
+|+|++++.+|.++|+||+.....+.... ...+..|.+||.... -.++.+.|.|+||+++|.|++|+.||.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 99999999999999999998776665433 344678999997733 247889999999999999999999986
Q ss_pred CCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 009750 271 SHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRER 332 (527)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R 332 (527)
........ .. .-..+. +.++.+..||..+|++||.+|
T Consensus 252 ~~~~~~~~-------------------~~-----~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 252 LSSPEADP-------------------EW-----DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCGGGSTS-------------------GG-----GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCccccc-------------------cc-----cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 54211110 00 112344 677889999999999999988
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=178.02 Aligned_cols=133 Identities=14% Similarity=0.065 Sum_probs=106.3
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-----CCCccceeEEEEEeCC---eee-
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-----RHKRLANLIGYCCDGD---ERL- 146 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-----~H~nIv~l~~~~~~~~---~~~- 146 (527)
..||+|+||.||. +.. ++.. +||++........+.+.+|+.+++.+ +||||++++|+++++. .++
T Consensus 8 ~~LG~G~~~~Vy~--hp~---~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPE---DAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred ceecCCCceEEEE--CCC---CcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 4569999999995 554 4444 69998776555567899999999999 5799999999998873 434
Q ss_pred EEEEe--cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHH-HHhhhCCCccccccCCCceEeCC----CCCceeecccC
Q 009750 147 LVAEY--MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEAL-DYCSSEGRPLYHDLNAYRVLFDE----NGDPRLSCFGL 219 (527)
Q Consensus 147 lv~E~--~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL-~~lH~~~~ivH~Dlkp~NIll~~----~~~~kl~DFG~ 219 (527)
+|||| +++|+|.+++.. ..+++. ..++.+++.++ .|||+++ ||||||||+|||++. ++.++|+||+.
T Consensus 82 ~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 78999 667999999953 346655 35688888888 9999999 999999999999974 34799999544
Q ss_pred c
Q 009750 220 M 220 (527)
Q Consensus 220 a 220 (527)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 3
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-20 Score=187.49 Aligned_cols=209 Identities=22% Similarity=0.322 Sum_probs=160.1
Q ss_pred hhcCCCCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCc-cccccCCC
Q 009750 124 VGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP-LYHDLNAY 202 (527)
Q Consensus 124 l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~i-vH~Dlkp~ 202 (527)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.-...++++|++||.|||..- | .|+.+++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP-IGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc-ceeeeeeccc
Confidence 4678999999999999999999999999999999999975 5677899999999999999999999875 5 99999999
Q ss_pred ceEeCCCCCceeecccCccccCCC------CccccCCccCCcccccCCc-------CCCCcccchhhHHHHHHHhCCCCC
Q 009750 203 RVLFDENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGR-------VTPESVIFSFGTVLLDLLSGKHIP 269 (527)
Q Consensus 203 NIll~~~~~~kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~-------~~~~~DvwslGvvl~elltg~~p~ 269 (527)
|.++|..+.+||+|||+....... ........|.|||.+.+.. .+.+.||||||++++|+++.+.||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 999999999999999998766431 1112245699999997631 466799999999999999999998
Q ss_pred CCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCC-H-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 270 PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS-S-EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.......... ........ .-...+++... . +..+.+..++..||..+|.+||++..+-..+..+.
T Consensus 159 ~~~~~~~~~~-------eii~~~~~-----~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 159 DLRNLVEDPD-------EIILRVKK-----GGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred ccccccCChH-------HHHHHHHh-----cCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 7543222100 00010111 00111111111 1 33446889999999999999999999988887654
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-20 Score=175.88 Aligned_cols=192 Identities=14% Similarity=0.172 Sum_probs=141.4
Q ss_pred CCCccceeEEEEEeC---------------------------CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHH
Q 009750 128 RHKRLANLIGYCCDG---------------------------DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180 (527)
Q Consensus 128 ~H~nIv~l~~~~~~~---------------------------~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ 180 (527)
+|||||+++++|.+. ..+|+||...+. +|.+++. ....+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh---cCCCchHHHHHHHHH
Confidence 599999999987642 246899998876 9999994 445666777789999
Q ss_pred HHHHHHHhhhCCCccccccCCCceEe--CCCC--CceeecccCccccCC----------CCccccCCccCCcccccCCc-
Q 009750 181 IAEALDYCSSEGRPLYHDLNAYRVLF--DENG--DPRLSCFGLMKNSRD----------GKSYSTNLAYTPPEYLRNGR- 245 (527)
Q Consensus 181 i~~aL~~lH~~~~ivH~Dlkp~NIll--~~~~--~~kl~DFG~a~~~~~----------~~~~~~t~~y~aPE~~~~~~- 245 (527)
+++|+.|||.+| |.|||+|.+|||+ |+++ .+.|+|||.+--... .....|.-.-||||+....+
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 9999999999999 4554 478999997643221 11234566789999986533
Q ss_pred -----CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHH
Q 009750 246 -----VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 320 (527)
Q Consensus 246 -----~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 320 (527)
.-.|+|.|+.|.+.||+++...||.+...-. +...+ ....--+..|..+++.+.+|
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~---------------L~~r~----Yqe~qLPalp~~vpp~~rql 489 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML---------------LDTRT----YQESQLPALPSRVPPVARQL 489 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchhe---------------echhh----hhhhhCCCCcccCChHHHHH
Confidence 2348999999999999999999997531110 00011 11111123566677889999
Q ss_pred HHHhcccCCCCCCCHHHHHHHhc
Q 009750 321 ASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 321 i~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
+..+|+.||++|++..-+...|.
T Consensus 490 V~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHhcCCccccCCccHHHhHHH
Confidence 99999999999988766555443
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-21 Score=189.71 Aligned_cols=235 Identities=18% Similarity=0.268 Sum_probs=155.4
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEE-------EEEe-----CCe
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIG-------YCCD-----GDE 144 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~-------~~~~-----~~~ 144 (527)
..+..+++.++......+......+..+.........-....+++..+....|.+..-+.+ .+.. ...
T Consensus 251 ~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~ 330 (516)
T KOG1033|consen 251 SSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVY 330 (516)
T ss_pred cccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccc
Confidence 3455555555554444322223444444443333122233444555555554444433333 1111 235
Q ss_pred eeEEEEecCCCCHhHHhhhc-CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 145 RLLVAEYMPNDTLAKHLFHW-ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
+||.|++|.-.+|.++|.++ .....++...+.++.|++.|+.| ++ .+|||+||.||++..+..+||+|||+....
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheeec
Confidence 78999999999999999743 34457888999999999999999 77 999999999999999999999999997654
Q ss_pred CCC----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhC-CCCCCCCCccccccccccchhhHHHHH
Q 009750 224 RDG----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-KHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 224 ~~~----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
... ....||..||+||.+.+..|+.++||||||+||+|+++- ...+.
T Consensus 407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e---------------------- 464 (516)
T KOG1033|consen 407 DKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE---------------------- 464 (516)
T ss_pred ccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----------------------
Confidence 332 245789999999999999999999999999999999972 11110
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~v 338 (527)
.......+-+..+.+.+..+. +.-..|+.+++...|.+||++.++
T Consensus 465 r~~t~~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 465 RIATLTDIRDGIIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred HHHhhhhhhcCCCChHHhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 111112222222221122222 233589999999999999965554
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.2e-20 Score=167.88 Aligned_cols=111 Identities=19% Similarity=0.297 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHH
Q 009750 414 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 493 (527)
Q Consensus 414 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~ 493 (527)
....++.++.+|+.+++.++|++|+..|++||+++|+ ++.+|-|+|.+|.++|+|+.|+++++.||.+||.+.++|-++
T Consensus 77 ~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~RL 155 (304)
T KOG0553|consen 77 DKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGRL 155 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHHH
Confidence 3466999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 494 AVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 494 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
|.+|+.+|+|++|++.|++||+|||+|..+|.
T Consensus 156 G~A~~~~gk~~~A~~aykKaLeldP~Ne~~K~ 187 (304)
T KOG0553|consen 156 GLAYLALGKYEEAIEAYKKALELDPDNESYKS 187 (304)
T ss_pred HHHHHccCcHHHHHHHHHhhhccCCCcHHHHH
Confidence 99999999999999999999999999997663
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-19 Score=168.61 Aligned_cols=144 Identities=17% Similarity=0.161 Sum_probs=111.5
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCCCCceEEEEEEcCcCCCC-------------------C-----hHHHHHHHHHhhc
Q 009750 72 DFIVSESGEKAPNVVYKGR-LQDGNDNRRWIAVKKFTKHAWP-------------------D-----PKQFADEAWGVGK 126 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~-~~~~~~~~~~vAiK~~~~~~~~-------------------~-----~~~~~~E~~~l~~ 126 (527)
+.+...||.|+||.||+|. +.. +|+.||||+++..... . ...+.+|+.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~---~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDG---SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCC---CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 4467789999999999998 444 7889999998754211 0 0235789999999
Q ss_pred CCCC--ccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCce
Q 009750 127 LRHK--RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204 (527)
Q Consensus 127 l~H~--nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NI 204 (527)
+.+. .+.+++++ ...+|||||++|++|..... ....+.......++.||+.+|.+||+.+.++||||||+||
T Consensus 107 L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NI 180 (237)
T smart00090 107 LYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNI 180 (237)
T ss_pred HHhcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhE
Confidence 9753 34444443 23589999999988876553 2345666677899999999999999987699999999999
Q ss_pred EeCCCCCceeecccCccccCC
Q 009750 205 LFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 205 ll~~~~~~kl~DFG~a~~~~~ 225 (527)
+++ ++.++|+|||.+.....
T Consensus 181 li~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred EEE-CCCEEEEEChhhhccCC
Confidence 999 88999999999875443
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-19 Score=165.43 Aligned_cols=134 Identities=18% Similarity=0.183 Sum_probs=112.9
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--------hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
..||+|++|.||+|.. .+..|+||+........ ...+.+|+.++..+.|++|.....++......++
T Consensus 2 ~~l~~G~~~~vy~~~~-----~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l 76 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-----LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFII 76 (211)
T ss_pred cccccCceEEEEEEee-----CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEE
Confidence 4679999999999987 34558999866433211 1358899999999999999888888877888999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
||||++|++|.+++... .+ .+..++.+++.+|.++|+.+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 77 v~e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 77 VMEYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999998531 12 78889999999999999999 99999999999999 78999999998755
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-20 Score=193.35 Aligned_cols=199 Identities=19% Similarity=0.163 Sum_probs=142.1
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
.|+.+..|++|.||.++++. +.+.+|+ ++++... +.+- ++.....|.+|
T Consensus 87 ~IklisngAygavylvrh~~---trqrfa~-kiNkq~l-----ilRn--ilt~a~npfvv-------------------- 135 (1205)
T KOG0606|consen 87 TIKLISNGAYGAVYLVRHKE---TRQRFAM-KINKQNL-----ILRN--ILTFAGNPFVV-------------------- 135 (1205)
T ss_pred eeEeeccCCCCceeeeeccc---cccchhh-cccccch-----hhhc--cccccCCccee--------------------
Confidence 67888999999999999987 7788999 4544321 1111 33333444443
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC--------
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-------- 225 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~-------- 225 (527)
|+=...+. ..+.++.. .+.+++|||+.+ |+|||+||+|.||+.-|++|++|||+++....
T Consensus 136 -gDc~tllk--~~g~lPvd--------mvla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~e 203 (1205)
T KOG0606|consen 136 -GDCATLLK--NIGPLPVD--------MVLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKE 203 (1205)
T ss_pred -chhhhhcc--cCCCCcch--------hhHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhh
Confidence 34445554 33344432 278999999999 99999999999999999999999999864221
Q ss_pred -----------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 226 -----------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 226 -----------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
.+..+||+.|+|||++....|+..+|+|++|+|+||.+-|..||+++...+. + +
T Consensus 204 g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel--------------f-g 268 (1205)
T KOG0606|consen 204 GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL--------------F-G 268 (1205)
T ss_pred cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH--------------H-h
Confidence 1235789999999999999999999999999999999999999987532111 0 0
Q ss_pred CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 009750 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP 333 (527)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp 333 (527)
.-+.+ ...-.+-+...++++.++|.++|+.+|..|.
T Consensus 269 ~visd---~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 269 QVISD---DIEWPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhh---hccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 00000 0001111334456789999999999999994
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.7e-19 Score=160.93 Aligned_cols=129 Identities=18% Similarity=0.219 Sum_probs=106.4
Q ss_pred CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--------hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 78 SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 78 lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
||+|+||.||+|.. +++.|+||+........ .+++.+|++++..+.|+++.....++......++||
T Consensus 2 ig~G~~~~vy~~~~-----~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 76 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-----LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVM 76 (199)
T ss_pred CCCCceEEEEEeec-----CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
Confidence 69999999999985 45679999865432111 246789999999999887766666666677789999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
||++|++|.+++... . . .++.+++.+|.+||+.+ ++|+|++|.|||++ ++.++++|||++..
T Consensus 77 e~~~g~~l~~~~~~~--~-~------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 77 EYIEGKPLKDVIEEG--N-D------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEECCccHHHHHhhc--H-H------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999999987531 1 1 78999999999999999 99999999999999 88999999999765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.1e-19 Score=188.60 Aligned_cols=186 Identities=18% Similarity=0.136 Sum_probs=148.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC---CCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR---HKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lv 148 (527)
+.|-+++|+|+||+||+|... +|+.||||+-+.... =+|.-=.+++.+|+ -+-|..+..++...+.-+||
T Consensus 700 ~~I~~e~G~g~y~~vy~a~~~----~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 700 FCISKEIGEGSYGSVYVATHS----NGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred EEEEeeeccccceEEEEeecC----CCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 335568899999999999987 588999999765431 12222334444554 23455555555556778999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-------CCCceeecccCcc
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-------NGDPRLSCFGLMK 221 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-------~~~~kl~DFG~a~ 221 (527)
+||.+.|+|.+++. ....++|..+..+..|++.-++.||..+ |||+||||+|+||.. +.-++|+|||.+.
T Consensus 773 ~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 773 SEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 99999999999997 6678999999999999999999999999 999999999999942 3459999999875
Q ss_pred c---cCCCCc---cccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCC
Q 009750 222 N---SRDGKS---YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH 267 (527)
Q Consensus 222 ~---~~~~~~---~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~ 267 (527)
. ..++.. ..+|-.+--+|...|.+++..+|.|.|..+++.||.|+.
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 3 334433 356888999999999999999999999999999999985
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-18 Score=157.16 Aligned_cols=135 Identities=16% Similarity=0.117 Sum_probs=106.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC----------------------ChHHHHHHHHHhhcCCCC-
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP----------------------DPKQFADEAWGVGKLRHK- 130 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~----------------------~~~~~~~E~~~l~~l~H~- 130 (527)
+...||.|+||.||++... +|+.||||++...... ....+.+|+.++..+.|+
T Consensus 19 ~~~~i~~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 19 LGNQIGVGKESDVYLALDP----DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred cCCccccCcceEEEEEEcC----CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 5567899999999999885 6788999987643210 012367899999999877
Q ss_pred -ccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC
Q 009750 131 -RLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (527)
Q Consensus 131 -nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~ 209 (527)
.+...++. ...++||||++|++|..... . .....++.+++.++.++|+.+ ++||||||+||+++++
T Consensus 95 i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~---~-----~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~~~ 161 (198)
T cd05144 95 FPVPKPIDW----NRHAVVMEYIDGVELYRVRV---L-----EDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVDDD 161 (198)
T ss_pred CCCCceeec----CCceEEEEEeCCcchhhccc---c-----ccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEcCC
Confidence 44555442 44689999999999976542 0 235678899999999999999 9999999999999999
Q ss_pred CCceeecccCccccCC
Q 009750 210 GDPRLSCFGLMKNSRD 225 (527)
Q Consensus 210 ~~~kl~DFG~a~~~~~ 225 (527)
+.++|+|||++.....
T Consensus 162 ~~~~liDfg~~~~~~~ 177 (198)
T cd05144 162 EKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcEEEEECCccccCCC
Confidence 9999999999865443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-18 Score=180.61 Aligned_cols=132 Identities=20% Similarity=0.177 Sum_probs=107.9
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEc-CcCCCC-------ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKF-TKHAWP-------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~-~~~~~~-------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
.+.||+|+||+||+|.+.. . .+++|+. .+.... ..+.+.+|++++..++|++|+....++......+
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~---~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLG---R--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred cceeccCCcEEEEEEeecC---c--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence 4567999999999998864 2 2444432 211111 1246889999999999999999888888777889
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
+||||++|++|.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ .++.++|+|||+++..
T Consensus 413 lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999999999884 35678999999999999999 9999999999999 6789999999998664
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.7e-17 Score=151.74 Aligned_cols=133 Identities=15% Similarity=0.095 Sum_probs=102.7
Q ss_pred CC-CCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-------------CChHHHHHHHHHhhcCCCCcc--ceeEEEEEe
Q 009750 78 SG-EKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-------------PDPKQFADEAWGVGKLRHKRL--ANLIGYCCD 141 (527)
Q Consensus 78 lg-~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nI--v~l~~~~~~ 141 (527)
+| .||.|+||.+... +..++||.+..... .....+.+|++++.+|.|++| +..+++...
T Consensus 39 lg~~~g~gtv~~v~~~-----~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 39 VGSAKGRGTTWFVQTP-----GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred eecCCCCccEEEEEeC-----CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 45 6777889988774 45589988854211 123468899999999998775 777776544
Q ss_pred CC----eeeEEEEecCC-CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeec
Q 009750 142 GD----ERLLVAEYMPN-DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSC 216 (527)
Q Consensus 142 ~~----~~~lv~E~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~D 216 (527)
.. ..+||||+++| .+|.+++.. ..++.. .+.+|+.+|.+||+.| |+||||||.|||++.++.++|+|
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEE
Confidence 32 23599999997 699988852 345544 3568999999999999 99999999999999999999999
Q ss_pred ccCcccc
Q 009750 217 FGLMKNS 223 (527)
Q Consensus 217 FG~a~~~ 223 (527)
||.+...
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9988663
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-17 Score=144.48 Aligned_cols=134 Identities=14% Similarity=0.014 Sum_probs=113.1
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCC--CccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH--KRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+++.+|.|.++.||++.... +.++||....... ...+.+|+.++..+.| .+++++++++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-----~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-----EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC-----CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35678999999999999852 5699999876543 4679999999999976 5899999998887889999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC---CCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE---GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~---~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
++++.+..+ +......++.+++.+|.++|.. + ++|+|++|+|||+++.+.++++|||.+....
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~-i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLV-LCHGDLHPGNILVDDGKILGIIDWEYAGYGP 140 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceE-EEecCCCcceEEEECCcEEEEEecccccCCC
Confidence 998777543 5566777899999999999985 5 9999999999999998999999999986543
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.1e-19 Score=183.62 Aligned_cols=253 Identities=17% Similarity=0.134 Sum_probs=191.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||.|+|+.|-....... ....+|+|.+.... ....++...|..+-..+. |+|++++++...+.+..+++
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~--~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRD--PESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccchhhhhhhcCC--CcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 44566789999999988777543 44667888776553 222345666888888886 99999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhh-hCCCccccccCCCceEeCCCC-CceeecccCccccCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS-SEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRD- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH-~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~~- 225 (527)
++|..|+++...+........+....-.++.|+..++.|+| ..+ +.|+||||+|.+++..+ .+|++|||+|.....
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 99999999999884222225666777889999999999999 888 99999999999999999 999999999976554
Q ss_pred C------Ccccc-CCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 226 G------KSYST-NLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 226 ~------~~~~~-t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
. ...+| ++.|+|||...+. ......|+||.|+++.-+++|..|+........ ..
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~------------------~~ 240 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG------------------RY 240 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc------------------cc
Confidence 2 12467 9999999999885 457789999999999999999998654322111 11
Q ss_pred hhhccccc--CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 298 LHLMDSHL--EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 298 ~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
........ .............+++.+++..+|..|.+.+++-..-+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~ 290 (601)
T KOG0590|consen 241 SSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLS 290 (601)
T ss_pred eeecccccccccCccccCChhhhhcccccccCCchhcccccccccccccc
Confidence 11111110 1112233455677899999999999999999887664443
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.2e-17 Score=146.70 Aligned_cols=137 Identities=18% Similarity=0.141 Sum_probs=98.8
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHH----------------------HHHHHHHhhcCCCC
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQ----------------------FADEAWGVGKLRHK 130 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~H~ 130 (527)
.+.||+|+||+||+|.+. +++.||||+++...... ... ...|...+.++.+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~----~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 77 (187)
T cd05119 2 GGPIGTGKEADVYLALDG----DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA 77 (187)
T ss_pred CcccccccceeEEEEECC----CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc
Confidence 456899999999999876 56789999987543211 111 13566666666443
Q ss_pred --ccceeEEEEEeCCeeeEEEEecCCCCHhHH-hhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEe
Q 009750 131 --RLANLIGYCCDGDERLLVAEYMPNDTLAKH-LFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLF 206 (527)
Q Consensus 131 --nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~-l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll 206 (527)
.+.+.+++ ...++||||++++++... +.. .... ..+..++.+++.++.++|. .+ ++|+||||+||++
T Consensus 78 ~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili 148 (187)
T cd05119 78 GVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILV 148 (187)
T ss_pred CCCCCceEec----CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEE
Confidence 34445443 246899999999544321 211 0111 5678899999999999999 88 9999999999999
Q ss_pred CCCCCceeecccCccccCC
Q 009750 207 DENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 207 ~~~~~~kl~DFG~a~~~~~ 225 (527)
+ ++.++|+|||.+.....
T Consensus 149 ~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 149 D-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred E-CCcEEEEECcccccccC
Confidence 9 89999999999865443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.1e-16 Score=133.44 Aligned_cols=106 Identities=13% Similarity=0.058 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..++..|..++..|+|++|+.+|++++.++|. +..+|.++|.++..+|++++|+..|.++++++|+++.+++++|.++
T Consensus 24 p~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l 102 (144)
T PRK15359 24 PETVYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCL 102 (144)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 445778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHcccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
..+|++++|+..|++|++++|++..+|
T Consensus 103 ~~~g~~~eAi~~~~~Al~~~p~~~~~~ 129 (144)
T PRK15359 103 KMMGEPGLAREAFQTAIKMSYADASWS 129 (144)
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999999998776
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.2e-15 Score=148.05 Aligned_cols=241 Identities=22% Similarity=0.247 Sum_probs=182.9
Q ss_pred ccccCCC--CCCCeEEEEEe--cCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 74 IVSESGE--KAPNVVYKGRL--QDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 74 ~~~~lg~--G~~g~Vy~~~~--~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
+.+.+|. |.+|.||.+.. .. ++..+|+|+-+.... .....=.+|+....++ .|+|.++.+..++..+..+
T Consensus 118 ~~~~~g~~~g~~~s~~~~~~~~~~---s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 118 ISSRTGSLPGSKGSVFKSRCTNSE---SPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred cccccccCCCCCceeecccCCccc---CCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4566799 99999999988 44 788899998554332 3344556788888888 6999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHH----HHHHhhhCCCccccccCCCceEeCCC-CCceeecccCcc
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE----ALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMK 221 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~----aL~~lH~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~ 221 (527)
+-+|++. .+|..+... ....++....+.++.+... ||.++|+.+ ++|-|+||.||++..+ ...+++|||+..
T Consensus 195 iqtE~~~-~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~ 271 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVS 271 (524)
T ss_pred eeecccc-chhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeE
Confidence 9999995 588888763 2334777788888888888 999999999 9999999999999999 889999999988
Q ss_pred ccCCCC---------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHH
Q 009750 222 NSRDGK---------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 222 ~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
...+.. ...+...|++||... +.++...|+|++|.++.+..++..++-..-...|.
T Consensus 272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-------------- 336 (524)
T KOG0601|consen 272 KISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-------------- 336 (524)
T ss_pred EccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcc--------------
Confidence 766543 114567799999985 56788999999999999999998776443222221
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.+-...+..++-...+..+..++..+++.+|..|++...++.+
T Consensus 337 ------~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 337 ------QLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ------ccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 1101111122222223445568999999999999999887764
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2e-14 Score=121.03 Aligned_cols=103 Identities=16% Similarity=0.034 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
++.+.+|..|..++..|++++|...|+.+..+||. ++..|+++|.|+..+|+|.+|+..|.+|+.++|+++.++++.|.
T Consensus 33 ~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~ 111 (157)
T PRK15363 33 QPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAE 111 (157)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 56889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
||+.+|+.++|.+.|+.|+.+.-.
T Consensus 112 c~L~lG~~~~A~~aF~~Ai~~~~~ 135 (157)
T PRK15363 112 CYLACDNVCYAIKALKAVVRICGE 135 (157)
T ss_pred HHHHcCCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999998843
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.2e-14 Score=142.39 Aligned_cols=105 Identities=27% Similarity=0.349 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 498 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~ 498 (527)
..+..+|..++..|+|++|+..|++||+++|. ++.+|+++|.+|+.+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHcccccccccc
Q 009750 499 KLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 499 ~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.+|+|++|+..|++|++++|++...+
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~~~~ 107 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDSRFT 107 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999987653
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-14 Score=147.41 Aligned_cols=140 Identities=19% Similarity=0.152 Sum_probs=98.8
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--------------------------h--------------H
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------------------------P--------------K 115 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--------------------------~--------------~ 115 (527)
..||.|++|.||+|+++ +|+.||||+.+...... . -
T Consensus 123 ~plasaSigQVh~A~l~----~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 198 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV----DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL 198 (437)
T ss_pred cceeeeehhheEEEEec----CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence 35799999999999997 67889999987542110 0 0
Q ss_pred HHHHHHHHhhcCC----CCccceeEEEEE-eCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHH-HHHHhh
Q 009750 116 QFADEAWGVGKLR----HKRLANLIGYCC-DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE-ALDYCS 189 (527)
Q Consensus 116 ~~~~E~~~l~~l~----H~nIv~l~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~-aL~~lH 189 (527)
+|.+|+..+.++. |.+-|.+-.++. .....+|||||++|++|.++..... ... .+..++..++. .+..+|
T Consensus 199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFLNQVL 274 (437)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHHHHHH
Confidence 2455666666552 333333333332 2345799999999999988764311 122 23456666666 467889
Q ss_pred hCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 190 SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 190 ~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
..| ++|+|++|.||+++.+++++|+|||++....
T Consensus 275 ~~g-~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 RDG-FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred hCC-ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 999 9999999999999999999999999986654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-14 Score=142.41 Aligned_cols=105 Identities=22% Similarity=0.382 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..+..+|++++..|+|+.|+.+|+.||.++|. |+..|.|+..||..+|+|++|+++..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 467889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
..+|+|++|+..|.++|+.||+|...
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~~L 106 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNKQL 106 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchHHH
Confidence 99999999999999999999998753
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-14 Score=140.97 Aligned_cols=105 Identities=24% Similarity=0.406 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
++..+..|+.+|+.|+|.+|+..|++||+.+|+ ++.+|.|+|.||.++|++..|+++++.+|+++|++.++|.+.|.++
T Consensus 358 A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al 436 (539)
T KOG0548|consen 358 AEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAAL 436 (539)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 777888899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
..+.+|+.|++.|.+++++||++..+
T Consensus 437 ~~mk~ydkAleay~eale~dp~~~e~ 462 (539)
T KOG0548|consen 437 RAMKEYDKALEAYQEALELDPSNAEA 462 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhHHH
Confidence 99999999999999999999998654
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.2e-14 Score=120.54 Aligned_cols=111 Identities=16% Similarity=0.282 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC----CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV----SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAF 490 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~ 490 (527)
...+..++..|+.+|.+|+|++|...|..||++-|.. ...+|.|+|.|+++++.++.|+.++.+||+++|.+-+|+
T Consensus 92 ~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~kAl 171 (271)
T KOG4234|consen 92 IEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEKAL 171 (271)
T ss_pred HHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHHHH
Confidence 4568889999999999999999999999999998873 256799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 491 YMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 491 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
.++|.+|..+..|++|+++|++.+++||.+..+.+
T Consensus 172 ~RRAeayek~ek~eealeDyKki~E~dPs~~ear~ 206 (271)
T KOG4234|consen 172 ERRAEAYEKMEKYEEALEDYKKILESDPSRREARE 206 (271)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhCcchHHHHH
Confidence 99999999999999999999999999999776543
|
|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.1e-14 Score=132.60 Aligned_cols=111 Identities=21% Similarity=0.261 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC--------------CHHHHHHHHHHHHhcCChHHHHHHHHH
Q 009750 413 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--------------SPTVYARRSLCHLMCDQPDAALRDAMQ 478 (527)
Q Consensus 413 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~--------------~~~~~~~~~~~~~~~g~~~~A~~~~~~ 478 (527)
+.+..+...++.|+.+|+.|+|..|...|++|+..-... -..+++|+|.||.++++|.+|++.+.+
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 567789999999999999999999999999998652211 145799999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 479 AQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 479 ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
+|+++|+|++|+|++|.+|..+|+|+.|+.+|++|++++|+|..+
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nka~ 327 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNKAA 327 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcHHH
Confidence 999999999999999999999999999999999999999999654
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.5e-13 Score=117.29 Aligned_cols=108 Identities=12% Similarity=0.164 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.++..++..|..++..|++++|+..|+++++.+|. +..+|.++|.+++.+|++++|+..++++++++|+++..++.+|.
T Consensus 15 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~ 93 (135)
T TIGR02552 15 EQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAE 93 (135)
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 45677899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|..+|++++|+..|+++++++|++...+
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 122 (135)
T TIGR02552 94 CLLALGEPESALKALDLAIEICGENPEYS 122 (135)
T ss_pred HHHHcCCHHHHHHHHHHHHHhccccchHH
Confidence 99999999999999999999999987643
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.8e-13 Score=131.54 Aligned_cols=105 Identities=15% Similarity=0.010 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..+..++.+|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..|+++++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
+++..|++++|++.|+++++++|++.
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999875
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.4e-14 Score=129.87 Aligned_cols=107 Identities=23% Similarity=0.305 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
+..+.++.++|+.||+.|+|++||.+|.+++.++|. ++..+.|+|.+|++++.|..|..++..|+.++-.+.+||-++|
T Consensus 94 L~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~ 172 (536)
T KOG4648|consen 94 LKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRM 172 (536)
T ss_pred HHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHH
Confidence 456778999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHcccccccc
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
.+...+|+.+||.++++.+|+|+|++..
T Consensus 173 ~AR~~Lg~~~EAKkD~E~vL~LEP~~~E 200 (536)
T KOG4648|consen 173 QARESLGNNMEAKKDCETVLALEPKNIE 200 (536)
T ss_pred HHHHHHhhHHHHHHhHHHHHhhCcccHH
Confidence 9999999999999999999999999654
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-14 Score=132.25 Aligned_cols=200 Identities=18% Similarity=0.212 Sum_probs=141.1
Q ss_pred HHhhcCCCCccceeEEEEEeC-----CeeeEEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCC-C
Q 009750 122 WGVGKLRHKRLANLIGYCCDG-----DERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEG-R 193 (527)
Q Consensus 122 ~~l~~l~H~nIv~l~~~~~~~-----~~~~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ 193 (527)
.-|-.+.|.|||+++.|+.+. ....++.|||..|+|..+|++. ....+....-.+|+.||..||.|||+.. +
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 344555799999999998654 3478999999999999999863 3456778888899999999999999987 5
Q ss_pred ccccccCCCceEeCCCCCceeecccCccccC--------CCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhC
Q 009750 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSR--------DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG 265 (527)
Q Consensus 194 ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg 265 (527)
|+|+++..+-|++..+|-+|++---...... +.....+-++|.+||.-.....+.++|||+||+..+||..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 7889999999999999988886422111100 01112345789999998878888999999999999999887
Q ss_pred CCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 266 KHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 266 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..-........... ....+....+...+ =..++.+|++..|..||+|.+++-|.-.
T Consensus 279 Eiq~tnseS~~~~e------------e~ia~~i~~len~l-----------qr~~i~kcl~~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 279 EIQSTNSESKVEVE------------ENIANVIIGLENGL-----------QRGSITKCLEGEPNGRPDARLLLFHPLL 334 (458)
T ss_pred eeccCCCcceeehh------------hhhhhheeeccCcc-----------ccCcCcccccCCCCCCcchhhhhcCcee
Confidence 65321111000000 00000000001111 1267899999999999999999887543
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-14 Score=146.10 Aligned_cols=139 Identities=17% Similarity=0.115 Sum_probs=94.3
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--------------------------C--------hH------
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------------------------D--------PK------ 115 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--------------------------~--------~~------ 115 (527)
..+|.|++|.||+|++++ +|+.||||+.++.... + .+
T Consensus 125 ~PlasaSiaQVh~A~l~~---~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~El 201 (537)
T PRK04750 125 KPLASASIAQVHFARLKD---NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDEL 201 (537)
T ss_pred hhhcCCCccEEEEEEECC---CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhh
Confidence 568999999999999986 5889999999754210 0 01
Q ss_pred HHHHHHHHhhcCC----CCccceeEEEEEe-CCeeeEEEEecCCCCHhHHhhhcCCC----CcCHHHHHHHHHHHHHHHH
Q 009750 116 QFADEAWGVGKLR----HKRLANLIGYCCD-GDERLLVAEYMPNDTLAKHLFHWENQ----TIEWAMRLRVALYIAEALD 186 (527)
Q Consensus 116 ~~~~E~~~l~~l~----H~nIv~l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~----~l~~~~~~~i~~~i~~aL~ 186 (527)
+|.+|+..+.++. +.+.+.+-.++.+ ....+|||||++|+.|.++-.-...+ .+....+..++.||
T Consensus 202 D~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi----- 276 (537)
T PRK04750 202 DLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV----- 276 (537)
T ss_pred CHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-----
Confidence 2455555555552 4444444444433 35578999999999998743211111 23333344444444
Q ss_pred HhhhCCCccccccCCCceEeCCCC----CceeecccCccccCC
Q 009750 187 YCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLMKNSRD 225 (527)
Q Consensus 187 ~lH~~~~ivH~Dlkp~NIll~~~~----~~kl~DFG~a~~~~~ 225 (527)
+..| ++|+|+||.||+++.++ ++++.|||++.....
T Consensus 277 --f~~G-ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 --FRDG-FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred --HhCC-eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3577 99999999999999888 999999999876543
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-13 Score=121.43 Aligned_cols=129 Identities=16% Similarity=0.078 Sum_probs=96.0
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccc-eeEEEEEeCCeeeEEEEecC
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLA-NLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~l~~~~~~~~~~~lv~E~~~ 153 (527)
++.++.|.++.||++... ++.|++|....... ....+.+|+.+++.+.+.+++ +++.+. ....++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-----~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-----NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC-----CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecC
Confidence 355788999999999874 56699998765432 223578899999999655544 455443 334589999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCC----ccccccCCCceEeCCCCCceeecccCccc
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR----PLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~----ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
|.++.... . ....++.+++++|..||+.+. ++|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 98775431 1 113456799999999999871 39999999999999 66899999998753
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.8e-13 Score=119.23 Aligned_cols=105 Identities=13% Similarity=0.109 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHH-HhcCC--hHHHHHHHHHHHHhCCCcHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCH-LMCDQ--PDAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~-~~~g~--~~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
++++.+..+|..+...|+|++|+..|++|++++|+ ++.++.++|.++ ...|+ +++|.+.++++++++|+++.++++
T Consensus 71 ~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al~~ 149 (198)
T PRK10370 71 QNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTALML 149 (198)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHHHH
Confidence 55889999999999999999999999999999999 999999999985 67788 599999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 493 QAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 493 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
+|.+++++|+|++|+..|+++++++|.+.
T Consensus 150 LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 150 LASDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 99999999999999999999999999754
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=1e-12 Score=117.38 Aligned_cols=141 Identities=11% Similarity=0.116 Sum_probs=102.1
Q ss_pred cccCCCCCCCeEEEEEecCC---CCCceEEEEEEcCcCCC---------------------CC-hHHH----HHHHHHhh
Q 009750 75 VSESGEKAPNVVYKGRLQDG---NDNRRWIAVKKFTKHAW---------------------PD-PKQF----ADEAWGVG 125 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~---~~~~~~vAiK~~~~~~~---------------------~~-~~~~----~~E~~~l~ 125 (527)
.+.||.|.-+.||.|...++ ...+..+|||+.+.... .+ .+.+ .+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 46789999999999986531 01246799999864211 01 1122 38999999
Q ss_pred cCC--CCccceeEEEEEeCCeeeEEEEecCCCCHhH-HhhhcCCCCcCHHHHHHHHHHHHHHHHHh-hhCCCccccccCC
Q 009750 126 KLR--HKRLANLIGYCCDGDERLLVAEYMPNDTLAK-HLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNA 201 (527)
Q Consensus 126 ~l~--H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~-~l~~~~~~~l~~~~~~~i~~~i~~aL~~l-H~~~~ivH~Dlkp 201 (527)
++. .-++..++++ ...+|||||+.+..+.. .+ ....++......+..+++.+|..| |..+ +||+||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L---kd~~~~~~~~~~i~~~i~~~l~~l~H~~g-lVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL---KDAKLNDEEMKNAYYQVLSMMKQLYKECN-LVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh---hccccCHHHHHHHHHHHHHHHHHHHHhCC-eecCCCCH
Confidence 994 3566777764 45689999997654422 23 223455566778889999999999 7888 99999999
Q ss_pred CceEeCCCCCceeecccCccccC
Q 009750 202 YRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 202 ~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
.|||++ ++.+.|+|||.+....
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4679999999886654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.5e-13 Score=137.79 Aligned_cols=243 Identities=15% Similarity=0.082 Sum_probs=178.3
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChH--HHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK--QFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~--~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+..||.|.|+.|+.+..... ++..+++|.+.+....... .-..|+-+...+ .|.+++.....+......+|--|
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~--~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e 346 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPE--GDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLE 346 (524)
T ss_pred eeEEccCCccccceeeeecCC--CCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchh
Confidence 466789999999999874422 6788999988876544432 234566666666 68999998888888888889999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC-CCceeecccCccccCCCC-c
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKNSRDGK-S 228 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~~~~~~~-~ 228 (527)
||+++++...+. ....+++..++++..|++.++.++|++. ++|+|+||+||++..+ +..+++|||......-.. .
T Consensus 347 ~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~ 423 (524)
T KOG0601|consen 347 FCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKL-FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGV 423 (524)
T ss_pred hhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchh-hhcccccccceeeccchhhhhccccccccccceeccc
Confidence 999998877663 4566888899999999999999999999 9999999999999886 889999999986422211 1
Q ss_pred cccCCccC--CcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 229 YSTNLAYT--PPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 229 ~~~t~~y~--aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
....-++. ++.......+..+.|++|||..+.|.+++....+... ....+.....
T Consensus 424 ~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~----------------------~~~~i~~~~~- 480 (524)
T KOG0601|consen 424 FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV----------------------QSLTIRSGDT- 480 (524)
T ss_pred ccccccccccchhhccccccccccccccccccccccccCcccCcccc----------------------cceeeecccc-
Confidence 12223344 4445555678899999999999999999986432211 1111111101
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...+. ....+..+...++..++..||.+.++..+.+..
T Consensus 481 p~~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 481 PNLPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred cCCCc-hHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 11122 226677888999999999999999887776554
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=7e-13 Score=131.21 Aligned_cols=124 Identities=10% Similarity=0.036 Sum_probs=111.7
Q ss_pred ccccchhhhHHHHHH-HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 009750 401 EGTNELSFQEWTQQM-RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479 (527)
Q Consensus 401 ~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 479 (527)
.+.+...|.....-. .-+.+..++|..+-+.|++++|+.+|+.||.++|. .+++|.|+|..|-.+|+..+|+..|.+|
T Consensus 370 ~e~A~~ly~~al~v~p~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rA 448 (966)
T KOG4626|consen 370 IEEATRLYLKALEVFPEFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRA 448 (966)
T ss_pred chHHHHHHHHHHhhChhhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHH
Confidence 344555555554433 34888999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 480 i~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
|.++|.+++||.++|.+|-..|+..+||..|+.||+|+|+..++.+
T Consensus 449 I~~nPt~AeAhsNLasi~kDsGni~~AI~sY~~aLklkPDfpdA~c 494 (966)
T KOG4626|consen 449 IQINPTFAEAHSNLASIYKDSGNIPEAIQSYRTALKLKPDFPDAYC 494 (966)
T ss_pred HhcCcHHHHHHhhHHHHhhccCCcHHHHHHHHHHHccCCCCchhhh
Confidence 9999999999999999999999999999999999999999887654
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-12 Score=97.59 Aligned_cols=67 Identities=16% Similarity=0.173 Sum_probs=60.6
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-ChHHHHHHHHHHHcccc
Q 009750 452 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLD-MHKDAADMLKEAASLEE 518 (527)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~l~p 518 (527)
++.+|.++|.+++.+|+|++|+..|+++|+++|+++.+|+++|.+|..+| ++++|+++|++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 67889999999999999999999999999999999999999999999998 79999999999999887
|
... |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.2e-12 Score=130.49 Aligned_cols=168 Identities=14% Similarity=0.163 Sum_probs=131.5
Q ss_pred EE-EEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhc
Q 009750 86 VY-KGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW 164 (527)
Q Consensus 86 Vy-~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~ 164 (527)
+| .|..+. ++.+|.|.+.+.......+...+-++-|+.++||||++++..++..+..|||+|-+. .|..++..
T Consensus 27 ~~~~~t~k~---~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~- 100 (690)
T KOG1243|consen 27 LWPDGTRKA---DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE- 100 (690)
T ss_pred cccccceec---cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-
Confidence 44 355555 788899999887665334567888999999999999999999999999999999984 58888863
Q ss_pred CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc----cccCCccCCccc
Q 009750 165 ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS----YSTNLAYTPPEY 240 (527)
Q Consensus 165 ~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----~~~t~~y~aPE~ 240 (527)
+........+.||+.||.|||..+.++|++|.-..|+|+..|+.||++|-++........ ...-..|..|+.
T Consensus 101 ----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~ 176 (690)
T KOG1243|consen 101 ----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEE 176 (690)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhh
Confidence 335556667899999999999766699999999999999999999999988755443321 112234666765
Q ss_pred ccCCcCCCCcccchhhHHHHHHHhC
Q 009750 241 LRNGRVTPESVIFSFGTVLLDLLSG 265 (527)
Q Consensus 241 ~~~~~~~~~~DvwslGvvl~elltg 265 (527)
+.... -..|.|.|||+++|++.|
T Consensus 177 ~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 177 IDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cCccc--cchhhhhHHHHHHHHhCc
Confidence 53222 457999999999999999
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-12 Score=125.97 Aligned_cols=96 Identities=22% Similarity=0.370 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
.+-+.+++.+|+.+|+.|+|++||++|++||++.|+ .+..|.|++-||..+|++++-+++..+|++++|++.+++++++
T Consensus 112 ~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~RRA 190 (606)
T KOG0547|consen 112 LKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLRRA 190 (606)
T ss_pred HHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 466899999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHH
Q 009750 495 VALAKLDMHKDAADMLK 511 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~ 511 (527)
.++..+|++++|+.+..
T Consensus 191 ~A~E~lg~~~eal~D~t 207 (606)
T KOG0547|consen 191 SAHEQLGKFDEALFDVT 207 (606)
T ss_pred HHHHhhccHHHHHHhhh
Confidence 99999999999998764
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.8e-12 Score=110.64 Aligned_cols=97 Identities=9% Similarity=-0.007 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+....++|..|++.|++..|.+.+++||+.||. +..+|..+|.+|.+.|+.+.|-+.|++|+.++|++.+.++|.|..+
T Consensus 35 a~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~FL 113 (250)
T COG3063 35 AKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGAFL 113 (250)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhHHH
Confidence 445566677777777777777777777777777 6777777777777777777777777777777777777777777777
Q ss_pred HHcCChHHHHHHHHHHHc
Q 009750 498 AKLDMHKDAADMLKEAAS 515 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~ 515 (527)
+.+|+|++|.+.|++|+.
T Consensus 114 C~qg~~~eA~q~F~~Al~ 131 (250)
T COG3063 114 CAQGRPEEAMQQFERALA 131 (250)
T ss_pred HhCCChHHHHHHHHHHHh
Confidence 777777777777766664
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=5e-13 Score=140.77 Aligned_cols=238 Identities=17% Similarity=0.136 Sum_probs=169.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+++-+-+|+++.++.+.-.. .|...++|+..... ..+.+....+-.++-...||-++...--+......+||++
T Consensus 808 i~~p~qS~sp~ss~p~~pa~---sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~ 884 (1205)
T KOG0606|consen 808 ITKPSQSGSPSSSFPASPAG---SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGH 884 (1205)
T ss_pred ecccccCCCCcccccCCccc---cccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhH
Confidence 56667788899888776554 55555666554332 1223334444444444456777765555556678899999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC-----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----- 225 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----- 225 (527)
|+.+++|...|+ ..+..+..-.......+..+++|||+.. ++|+|++|.|+|...+++.+++|||.......
T Consensus 885 ~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~~-r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~ 961 (1205)
T KOG0606|consen 885 YLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSSL-RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTT 961 (1205)
T ss_pred HhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccch-hhcccccccchhhcccCCcccCccccccccccccCcC
Confidence 999999999997 4456666667777888999999999987 99999999999999999999999984321110
Q ss_pred ------------------------------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcc
Q 009750 226 ------------------------------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMV 275 (527)
Q Consensus 226 ------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~ 275 (527)
.....+|+.|.+||...+......+|+|++|++++|.++|.+||.....
T Consensus 962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp- 1040 (1205)
T KOG0606|consen 962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP- 1040 (1205)
T ss_pred CcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch-
Confidence 0012468899999999999999999999999999999999999853210
Q ss_pred ccccccccchhhHHHHHhcCcchhhcccccC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 009750 276 VWNTVPIKFNFGALDMIRGKNILHLMDSHLE-GNFSSEEATVVFDLASRCLQYEPRERPNTK 336 (527)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~ 336 (527)
...+..+...... ..-+...+..+.+++...+..+|.+|..+.
T Consensus 1041 ------------------q~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1041 ------------------QQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred ------------------hhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 0111111111111 112344567788999999999999998775
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.7e-12 Score=126.17 Aligned_cols=108 Identities=10% Similarity=0.034 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..++..+++|+++.+.|++++|+..|.+|++..|. .+.++.|+|.+|.++|++++|+..|++||+++|.++++|.++|.
T Consensus 352 ~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~NmGn 430 (966)
T KOG4626|consen 352 NHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALSNMGN 430 (966)
T ss_pred ccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHHhcch
Confidence 45889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.|-++|+.++|++.|.+|+.++|.-.+++
T Consensus 431 t~ke~g~v~~A~q~y~rAI~~nPt~AeAh 459 (966)
T KOG4626|consen 431 TYKEMGDVSAAIQCYTRAIQINPTFAEAH 459 (966)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcHHHHHH
Confidence 99999999999999999999999755543
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.33 E-value=2e-11 Score=101.52 Aligned_cols=105 Identities=11% Similarity=0.111 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc---HHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW---STAFY 491 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~---~~~~~ 491 (527)
++.++..|..+++.|+|++|+..|.+++...|. + ..+++.+|.++++.|++++|+..+++++..+|++ +.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (119)
T TIGR02795 2 EEAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALL 80 (119)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHH
Confidence 467899999999999999999999999998876 4 5789999999999999999999999999999885 67899
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 492 MQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 492 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
.+|.++..+|++++|+..|+++++..|++..+
T Consensus 81 ~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 112 (119)
T TIGR02795 81 KLGMSLQELGDKEKAKATLQQVIKRYPGSSAA 112 (119)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHCcCChhH
Confidence 99999999999999999999999999987643
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=8e-12 Score=115.75 Aligned_cols=106 Identities=18% Similarity=0.174 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.+++..+++|..++..|+|.+|+..|..|++.||+ ++.+++.+|.+|+.+|+-..|+.++.++|++.||+..|...+|.
T Consensus 36 advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQRg~ 114 (504)
T KOG0624|consen 36 ADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQRGV 114 (504)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHHhch
Confidence 56889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
+++++|++++|..+|+++|+.+|.+..
T Consensus 115 vllK~Gele~A~~DF~~vl~~~~s~~~ 141 (504)
T KOG0624|consen 115 VLLKQGELEQAEADFDQVLQHEPSNGL 141 (504)
T ss_pred hhhhcccHHHHHHHHHHHHhcCCCcch
Confidence 999999999999999999999997543
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.4e-12 Score=126.19 Aligned_cols=106 Identities=21% Similarity=0.235 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
+++...-+|..|+-.|+|++|+.+|+.||..+|+ +..+|+.+|..+....+.++|+..|.+|+++.|.+..++|++|++
T Consensus 429 DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgIS 507 (579)
T KOG1125|consen 429 DPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGIS 507 (579)
T ss_pred ChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhhh
Confidence 4677788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHccccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
++.+|.|+||+.+|-.||.+.+++...
T Consensus 508 ~mNlG~ykEA~~hlL~AL~mq~ks~~~ 534 (579)
T KOG1125|consen 508 CMNLGAYKEAVKHLLEALSMQRKSRNH 534 (579)
T ss_pred hhhhhhHHHHHHHHHHHHHhhhccccc
Confidence 999999999999999999999985443
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.5e-12 Score=93.02 Aligned_cols=67 Identities=15% Similarity=0.286 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHhCC
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD-QPDAALRDAMQAQCVYP 484 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g-~~~~A~~~~~~ai~~~p 484 (527)
++..++.+|..++..|+|++|+.+|++||+++|. ++.+|+++|.||..+| ++++|+++++++++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 4788999999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.1e-11 Score=103.17 Aligned_cols=131 Identities=20% Similarity=0.185 Sum_probs=98.4
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--------hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+++|+-+.+|.+.+.+ ..+.+|.=.++.-.. .++-.+|+.++.++.--.|..-.=+..+.....|+
T Consensus 3 ~i~~GAEa~i~~~~~~g-----~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~ 77 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG-----LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIV 77 (204)
T ss_pred hhhCCcceeEEeeeccC-----cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEE
Confidence 45889999999997743 335666432222111 23578899999999655555555555677778899
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
|||++|..|.+.+... ...++..|-.-+.-||..+ |||+||.++||++..+. +.++|||++...
T Consensus 78 me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g-ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 78 MEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAG-IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC-eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999999899888632 2456777888888899999 99999999999998765 999999998654
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.2e-11 Score=130.95 Aligned_cols=106 Identities=17% Similarity=0.149 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
.+..+..+|..++..|++++|+..|+++++++|. +..+|.++|.++..+|++++|+..|+++++++|+++.+|+.+|.+
T Consensus 330 ~a~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~ 408 (615)
T TIGR00990 330 EAIALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQL 408 (615)
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3455666666666666777777777776666666 666666666666666666666666666666666666666666666
Q ss_pred HHHcCChHHHHHHHHHHHccccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
++.+|++++|+.+|+++++++|++..+
T Consensus 409 ~~~~g~~~~A~~~~~kal~l~P~~~~~ 435 (615)
T TIGR00990 409 HFIKGEFAQAGKDYQKSIDLDPDFIFS 435 (615)
T ss_pred HHHcCCHHHHHHHHHHHHHcCccCHHH
Confidence 666666666666666666666665444
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.8e-11 Score=106.89 Aligned_cols=106 Identities=19% Similarity=0.171 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC--CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
..++..++.+|..+...|+|++|+.+|+++++..|.. ...+++++|.++..+|++++|+..+.+++++.|++..++..
T Consensus 32 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 111 (172)
T PRK02603 32 AKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALNN 111 (172)
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 3568889999999999999999999999999886552 25789999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC--------------hHHHHHHHHHHHcccccc
Q 009750 493 QAVALAKLDM--------------HKDAADMLKEAASLEEKR 520 (527)
Q Consensus 493 ~g~~~~~~~~--------------~~~A~~~~~~al~l~p~~ 520 (527)
+|.+|..+|+ +++|++.|+++++++|++
T Consensus 112 lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~ 153 (172)
T PRK02603 112 IAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNN 153 (172)
T ss_pred HHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchh
Confidence 9999999998 789999999999999986
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.6e-11 Score=102.22 Aligned_cols=144 Identities=18% Similarity=0.142 Sum_probs=107.7
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--------ChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
.++.+-+|+-+.|+++.+ .|+...||.-...... ...+..+|+.+|.++.--.|.--.=++.+...-
T Consensus 11 ~l~likQGAEArv~~~~~-----~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~ 85 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-----SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGG 85 (229)
T ss_pred cceeeeccceeeEeeecc-----CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCC
Confidence 455668899999999998 5566677753322111 134678999999999765665555566777778
Q ss_pred eEEEEecCC-CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC---CceeecccCcc
Q 009750 146 LLVAEYMPN-DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGLMK 221 (527)
Q Consensus 146 ~lv~E~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~---~~kl~DFG~a~ 221 (527)
.|+|||++| .++.+++...............++..|-+.+.-||.++ +||+||..+||+|..++ .+.++|||++.
T Consensus 86 ~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 86 QIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred eEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchh
Confidence 999999987 47888887644444444444778999999999999999 99999999999996554 35899999975
Q ss_pred cc
Q 009750 222 NS 223 (527)
Q Consensus 222 ~~ 223 (527)
..
T Consensus 165 ~s 166 (229)
T KOG3087|consen 165 VS 166 (229)
T ss_pred cc
Confidence 43
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.7e-11 Score=94.03 Aligned_cols=99 Identities=18% Similarity=0.292 Sum_probs=94.8
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 009750 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 499 (527)
Q Consensus 420 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~ 499 (527)
.++.+|..++..|++++|+..|+++++..|. +..+++.+|.++...|++++|++.+++++++.|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 4678899999999999999999999999998 889999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHccccc
Q 009750 500 LDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 500 ~~~~~~A~~~~~~al~l~p~ 519 (527)
.|++++|...|+++++++|+
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999999874
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.5e-11 Score=112.10 Aligned_cols=140 Identities=17% Similarity=0.152 Sum_probs=107.4
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCC--CccceeEEEEEeC---CeeeEEE
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRH--KRLANLIGYCCDG---DERLLVA 149 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~---~~~~lv~ 149 (527)
..+|.|.++.||++... +|+.+++|....... .....+.+|++++..+.+ .++.+++.+.... +..++||
T Consensus 4 ~~l~~G~~n~~~~v~~~----~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG----GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEec----CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 45689999999999875 346699999865432 134578999999999965 4567788877654 2678999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC--------------------------------------
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-------------------------------------- 191 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~-------------------------------------- 191 (527)
||++|.+|...+. ...++......++.+++++|..||+.
T Consensus 80 e~i~G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 80 ERVDGRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EEeCCEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 9999988877652 13567777777888888888888742
Q ss_pred -----------------CCccccccCCCceEeCC--CCCceeecccCccc
Q 009750 192 -----------------GRPLYHDLNAYRVLFDE--NGDPRLSCFGLMKN 222 (527)
Q Consensus 192 -----------------~~ivH~Dlkp~NIll~~--~~~~kl~DFG~a~~ 222 (527)
..++|+|+.|.|||++. ++.+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 12599999999999998 56689999998754
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-11 Score=113.61 Aligned_cols=108 Identities=20% Similarity=0.354 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc---CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDV---GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
+.|+.|++.|+.+|+.++|..|+.+|+++|+. ||..++.+|.|+|.|.+.+|+|..|+.++.+|+.++|.+.++||+
T Consensus 79 E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~R 158 (390)
T KOG0551|consen 79 EQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYIR 158 (390)
T ss_pred HHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhh
Confidence 36899999999999999999999999999976 555578999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 493 QAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 493 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
-|.|++++.++.+|+..++..++++-+++.+
T Consensus 159 ~Akc~~eLe~~~~a~nw~ee~~~~d~e~K~~ 189 (390)
T KOG0551|consen 159 GAKCLLELERFAEAVNWCEEGLQIDDEAKKA 189 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 9999999999999999999999988776543
|
|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.26 E-value=9.7e-12 Score=96.33 Aligned_cols=82 Identities=16% Similarity=0.267 Sum_probs=74.8
Q ss_pred hhhHHHHHHHHHHhhhcCCCC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHH
Q 009750 431 EKEFKTAVDCYSQFIDVGTMV-SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADM 509 (527)
Q Consensus 431 ~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~ 509 (527)
.|+|++|+..|+++++.+|.. +..+++++|.||+++|+|++|+..+++ ++.+|.++..++.+|.+++++|+|++|+..
T Consensus 2 ~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~~ 80 (84)
T PF12895_consen 2 QGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIKA 80 (84)
T ss_dssp TT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHHH
T ss_pred CccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 689999999999999999852 467888899999999999999999999 899999999999999999999999999999
Q ss_pred HHHH
Q 009750 510 LKEA 513 (527)
Q Consensus 510 ~~~a 513 (527)
|++|
T Consensus 81 l~~~ 84 (84)
T PF12895_consen 81 LEKA 84 (84)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9986
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.7e-11 Score=116.42 Aligned_cols=105 Identities=19% Similarity=0.385 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC---CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV---SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 491 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~ 491 (527)
.+.-+...+.|+.+|+.|+|.+|.++|+.||.++|.. ++.+|.|+|.++.++|+..+|+.+++.|++++|.+.+++.
T Consensus 246 ~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall 325 (486)
T KOG0550|consen 246 PKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALL 325 (486)
T ss_pred HHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHH
Confidence 3557788899999999999999999999999999973 4678999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 492 MQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 492 ~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
++|.|+..++++++|+++|++|++++..
T Consensus 326 ~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 326 RRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999998765
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.7e-11 Score=131.79 Aligned_cols=105 Identities=10% Similarity=-0.028 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..+...|.++.+.|++++|+..|+++++++|. ++.+++++|.++..+|++++|+..|++|++++|+++.+++++|.+
T Consensus 608 ~~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~a 686 (987)
T PRK09782 608 SANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYV 686 (987)
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4678899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHcccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
+..+|++++|+.+|++|++++|++..
T Consensus 687 l~~lGd~~eA~~~l~~Al~l~P~~a~ 712 (987)
T PRK09782 687 NQRLDDMAATQHYARLVIDDIDNQAL 712 (987)
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCCch
Confidence 99999999999999999999998754
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.1e-11 Score=127.08 Aligned_cols=106 Identities=14% Similarity=0.136 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.++..++.+|..++..|+|++|+.+|+++++++|. +..++.++|.+++++|++++|+..|+++++..|+++.+++.+|.
T Consensus 397 ~~~~~~~~lg~~~~~~g~~~~A~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~ 475 (615)
T TIGR00990 397 EDPDIYYHRAQLHFIKGEFAQAGKDYQKSIDLDPD-FIFSHIQLGVTQYKEGSIASSMATFRRCKKNFPEAPDVYNYYGE 475 (615)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCcc-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 34778888999999999999999999999999888 88889999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
++..+|++++|+..|++|++++|++..
T Consensus 476 ~~~~~g~~~~A~~~~~~Al~l~p~~~~ 502 (615)
T TIGR00990 476 LLLDQNKFDEAIEKFDTAIELEKETKP 502 (615)
T ss_pred HHHHccCHHHHHHHHHHHHhcCCcccc
Confidence 999999999999999999999887544
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.22 E-value=2e-10 Score=101.87 Aligned_cols=105 Identities=20% Similarity=0.154 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC--CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 493 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~ 493 (527)
+.+..++..|..+...|+|++|+..|++|+.+.+.. ...+|.++|.++..+|++++|+..+++|++++|.+..++.++
T Consensus 33 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~~l 112 (168)
T CHL00033 33 KEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNNM 112 (168)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHH
Confidence 458889999999999999999999999999886541 346899999999999999999999999999999999999999
Q ss_pred HHHHH-------HcCChH-------HHHHHHHHHHcccccc
Q 009750 494 AVALA-------KLDMHK-------DAADMLKEAASLEEKR 520 (527)
Q Consensus 494 g~~~~-------~~~~~~-------~A~~~~~~al~l~p~~ 520 (527)
|.++. .+|+++ +|+..|++++.++|.+
T Consensus 113 a~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~ 153 (168)
T CHL00033 113 AVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN 153 (168)
T ss_pred HHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 99999 777766 6677777888899864
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=4e-10 Score=108.12 Aligned_cols=254 Identities=16% Similarity=0.133 Sum_probs=156.1
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEE------EEeCC-eeeE
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGY------CCDGD-ERLL 147 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~------~~~~~-~~~l 147 (527)
..||+|+.+.+|..-.-.+ .+.|++........ ..-+..|... .||-+-.=+.+ .-+.+ .+-+
T Consensus 17 r~LgqGgea~ly~l~e~~d------~VAKIYh~Pppa~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 17 RPLGQGGEADLYTLGEVRD------QVAKIYHAPPPAAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred ccccCCccceeeecchhhc------hhheeecCCCchHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 4679999999996433221 34577765432211 1223334444 67654331111 01122 2678
Q ss_pred EEEecCCCC-HhHHhh----hcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 148 VAEYMPNDT-LAKHLF----HWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 148 v~E~~~~g~-L~~~l~----~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
.|..+.+.. ...++. ++.-....|.-.+++++.++.+.+-||..| .+-+|+.++|+|+++++.+.|.|=..-..
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G-h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG-HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC-CcccccCccceeeecCceEEEEcccceee
Confidence 888887752 222332 112345789999999999999999999999 88899999999999999999987443222
Q ss_pred cCCC---CccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhC-CCCCCCCCccccccccccchhhHHHHHh
Q 009750 223 SRDG---KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSG-KHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 223 ~~~~---~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
...+ ...+|...|.+||.-. +..-+...|.|.|||++++++.| ++||.+-........+... .+.
T Consensus 167 ~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~------~Ia 240 (637)
T COG4248 167 NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET------DIA 240 (637)
T ss_pred ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh------hhh
Confidence 2222 2346788999999764 23456789999999999999987 8998765332211111110 000
Q ss_pred cCcchhhccc--c---cCCCCC-HHHHHHHHHHHHHhccc--CCCCCCCHHHHHHHhccc
Q 009750 294 GKNILHLMDS--H---LEGNFS-SEEATVVFDLASRCLQY--EPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 294 ~~~~~~~~~~--~---~~~~~~-~~~~~~~~~li~~cl~~--dp~~Rpt~~~vl~~L~~~ 345 (527)
...+...-+. . ....+| .-.++.+..|..+|+.. ++.-|||++..+..|..+
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 0111000000 0 111222 23467788999999985 466899999888777654
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.8e-10 Score=111.89 Aligned_cols=216 Identities=17% Similarity=0.148 Sum_probs=155.7
Q ss_pred CCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEe----CCeeeEEEEecCC-CCH
Q 009750 83 PNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLLVAEYMPN-DTL 157 (527)
Q Consensus 83 ~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lv~E~~~~-g~L 157 (527)
-.+.|++.... +|..|++|++.............-+++++++.|+|||++.++|.. +..+++|++|.++ ++|
T Consensus 289 ~~Ttyk~~s~~---DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNV---DGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeecc---CCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 34788998877 889999999955443344345566889999999999999999873 3568999999987 477
Q ss_pred hHHhhhc-------------CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 158 AKHLFHW-------------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 158 ~~~l~~~-------------~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
.++-... .+...++..++.++.|+..||.++|+.| +.-+-|.|.+||++.+.+++|+.-|+.....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG-LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG-LACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC-ceeecccHhHeEeeCcceEEEecccceeeec
Confidence 7765422 1234678999999999999999999999 8779999999999999999998777765544
Q ss_pred CCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 225 DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 225 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
.... |.+. --.+-|.=.||.+++-|.||..-- | ........
T Consensus 445 ~d~~----------~~le---~~Qq~D~~~lG~ll~aLAt~~~ns-------~---------------~~d~~~~s---- 485 (655)
T KOG3741|consen 445 EDPT----------EPLE---SQQQNDLRDLGLLLLALATGTENS-------N---------------RTDSTQSS---- 485 (655)
T ss_pred CCCC----------cchh---HHhhhhHHHHHHHHHHHhhccccc-------c---------------cccchHHH----
Confidence 3320 1111 112568889999999999996421 0 00000000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.........+.++.+++.-....++.+ -++.+++.+.
T Consensus 486 ~~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 486 HLTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 001123456677888999999888887 7888888764
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-10 Score=122.73 Aligned_cols=88 Identities=14% Similarity=0.062 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHH
Q 009750 433 EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKE 512 (527)
Q Consensus 433 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 512 (527)
++++|+..+++|++++|. ++.+|..+|.++...|++++|+..|++|++++|+++.+|+.+|.++..+|++++|+..|++
T Consensus 319 ~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~~ 397 (553)
T PRK12370 319 AMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTINE 397 (553)
T ss_pred HHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 356666666666666666 6666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHccccccc
Q 009750 513 AASLEEKRQ 521 (527)
Q Consensus 513 al~l~p~~~ 521 (527)
+++++|.+.
T Consensus 398 Al~l~P~~~ 406 (553)
T PRK12370 398 CLKLDPTRA 406 (553)
T ss_pred HHhcCCCCh
Confidence 666666543
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.3e-12 Score=121.21 Aligned_cols=108 Identities=27% Similarity=0.376 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
.++.+..+|+.++..++|+.|+..|.+||+++|+ ++.+|-+++.++.+.++|..|+.++.+||+++|.+.++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 3677889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHccccccccccC
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
.+.++++.+|+.+|+++..+.|++..+.|
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r 110 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDPDATR 110 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcHHHHH
Confidence 99999999999999999999999887655
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-10 Score=103.20 Aligned_cols=109 Identities=17% Similarity=0.166 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc--------CCCC---------CHHHHHHHHHHHHhcCChHHHHHH
Q 009750 413 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV--------GTMV---------SPTVYARRSLCHLMCDQPDAALRD 475 (527)
Q Consensus 413 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~---------~~~~~~~~~~~~~~~g~~~~A~~~ 475 (527)
++++....+.+.|+.+|+.|+|++|...|+.||.. .|.. ...++.|.+.|++..|+|-++++.
T Consensus 173 eKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~yevleh 252 (329)
T KOG0545|consen 173 EKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEYYEVLEH 252 (329)
T ss_pred HhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHHHHHHHH
Confidence 45667889999999999999999999999998742 2221 356799999999999999999999
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 476 AMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 476 ~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
....++.+|+|.+|||++|.++....+.++|.++|.++|++||.-.
T Consensus 253 ~seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldpsla 298 (329)
T KOG0545|consen 253 CSEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPSLA 298 (329)
T ss_pred HHHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChhhH
Confidence 9999999999999999999999999999999999999999999643
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.6e-11 Score=87.08 Aligned_cols=64 Identities=19% Similarity=0.115 Sum_probs=44.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 457 ARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 457 ~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
+.+|..++..|++++|+..|+++++.+|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 1 ~~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 1 YALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 3566677777777777777777777777777777777777777777777777777777777765
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.5e-11 Score=122.03 Aligned_cols=103 Identities=15% Similarity=0.127 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+=+|-.+|..+....+|++|..+|+.||.++|+ ++.+||-+|.+|+++++++.|.-.|++|++++|.+......+|.++
T Consensus 455 aYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~~ 533 (638)
T KOG1126|consen 455 AYAYTLLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGRIQ 533 (638)
T ss_pred chhhhhcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhHHH
Confidence 556777888888889999999999999999888 8899999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
.++|+.++|+..|++|+.+||.|.
T Consensus 534 ~~~k~~d~AL~~~~~A~~ld~kn~ 557 (638)
T KOG1126|consen 534 HQLKRKDKALQLYEKAIHLDPKNP 557 (638)
T ss_pred HHhhhhhHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999875
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.4e-10 Score=101.05 Aligned_cols=123 Identities=15% Similarity=0.120 Sum_probs=106.5
Q ss_pred CccccchhhhHHHH-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 009750 400 DEGTNELSFQEWTQ-QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQ 478 (527)
Q Consensus 400 ~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 478 (527)
+...+.....+.+. ..+....+..+|..|.+.|+.+.|-+.|++|+.++|+ +.++++|.|.-++.+|+|++|...|++
T Consensus 50 d~~~A~~nlekAL~~DPs~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~ 128 (250)
T COG3063 50 DYAQAKKNLEKALEHDPSYYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFER 128 (250)
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHH
Confidence 33334455554444 3344778888999999999999999999999999999 999999999999999999999999999
Q ss_pred HHH--hCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 479 AQC--VYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 479 ai~--~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
|++ ..|.-++.|-|+|.|-+++|+++.|.++|+++|++||++.-+
T Consensus 129 Al~~P~Y~~~s~t~eN~G~Cal~~gq~~~A~~~l~raL~~dp~~~~~ 175 (250)
T COG3063 129 ALADPAYGEPSDTLENLGLCALKAGQFDQAEEYLKRALELDPQFPPA 175 (250)
T ss_pred HHhCCCCCCcchhhhhhHHHHhhcCCchhHHHHHHHHHHhCcCCChH
Confidence 998 345668899999999999999999999999999999997643
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.9e-11 Score=120.67 Aligned_cols=107 Identities=16% Similarity=0.134 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
+.=.++|-+|.+|++.++|+.|.-+|++|++++|. +..+...+|..+.++|+.++|+..+++|+.++|.++-.-|.+|.
T Consensus 487 rhYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~-nsvi~~~~g~~~~~~k~~d~AL~~~~~A~~ld~kn~l~~~~~~~ 565 (638)
T KOG1126|consen 487 RHYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPS-NSVILCHIGRIQHQLKRKDKALQLYEKAIHLDPKNPLCKYHRAS 565 (638)
T ss_pred hhhHHHHhhhhheeccchhhHHHHHHHhhhcCCcc-chhHHhhhhHHHHHhhhhhHHHHHHHHHHhcCCCCchhHHHHHH
Confidence 45667888999999999999999999999999998 88889999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
+++.+++|++|+..+++.-++-|++...
T Consensus 566 il~~~~~~~eal~~LEeLk~~vP~es~v 593 (638)
T KOG1126|consen 566 ILFSLGRYVEALQELEELKELVPQESSV 593 (638)
T ss_pred HHHhhcchHHHHHHHHHHHHhCcchHHH
Confidence 9999999999999999999888887654
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.6e-11 Score=104.57 Aligned_cols=100 Identities=26% Similarity=0.408 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
.++.+.+.|+.+|..+.|..|+.+|.+||.+.|. .+..|.|++.||+++.+++.+..+..+|++++|+.++++|.+|.+
T Consensus 9 ~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~~ 87 (284)
T KOG4642|consen 9 SAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQW 87 (284)
T ss_pred HHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHccc
Q 009750 497 LAKLDMHKDAADMLKEAASLE 517 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~ 517 (527)
+++...|++||..+.+|+.+-
T Consensus 88 ~l~s~~~~eaI~~Lqra~sl~ 108 (284)
T KOG4642|consen 88 LLQSKGYDEAIKVLQRAYSLL 108 (284)
T ss_pred HHhhccccHHHHHHHHHHHHH
Confidence 999999999999999997654
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.1e-10 Score=109.33 Aligned_cols=111 Identities=7% Similarity=-0.018 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCCh--HHHHHHHHHHHHhCCCcHHHH
Q 009750 414 QMRDMLEARKRGDVAFREK-EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQP--DAALRDAMQAQCVYPDWSTAF 490 (527)
Q Consensus 414 ~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~--~~A~~~~~~ai~~~p~~~~~~ 490 (527)
...+...+..+|.++...| ++++|+..++++++.+|. +..+|++++.++.++|+. ++++..++++|+++|++..+|
T Consensus 67 nP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW 145 (320)
T PLN02789 67 NPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHAW 145 (320)
T ss_pred CchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHHH
Confidence 4456778889999999998 689999999999999999 999999999999999974 788999999999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 491 YMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 491 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
+.+|.++..+|++++|+++++++|++||+|..+|.
T Consensus 146 ~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW~ 180 (320)
T PLN02789 146 SHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSAWN 180 (320)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhHHH
Confidence 99999999999999999999999999999999884
|
|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.4e-10 Score=103.15 Aligned_cols=106 Identities=17% Similarity=0.065 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.+.+.+..+|+.++..|+|.+|+..+++|..++|+ ++.+|+.+|.+|.++|++++|...|.+|+++.|.++.+..|+|.
T Consensus 98 ~d~~ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlgm 176 (257)
T COG5010 98 KDRELLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLGM 176 (257)
T ss_pred ccHHHHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCchhhhhHHH
Confidence 44566677999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
.|+..|+++.|...+..+....+.+..
T Consensus 177 s~~L~gd~~~A~~lll~a~l~~~ad~~ 203 (257)
T COG5010 177 SLLLRGDLEDAETLLLPAYLSPAADSR 203 (257)
T ss_pred HHHHcCCHHHHHHHHHHHHhCCCCchH
Confidence 999999999999999999888776654
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.2e-10 Score=103.89 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=88.3
Q ss_pred hhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH-HHcCC--hHHH
Q 009750 430 REKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL-AKLDM--HKDA 506 (527)
Q Consensus 430 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~-~~~~~--~~~A 506 (527)
..++.++++..++++++.+|+ +...|+++|.+|..+|++++|+..|++|++++|+++.+++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 468889999999999999999 9999999999999999999999999999999999999999999985 67787 5999
Q ss_pred HHHHHHHHcccccccccc
Q 009750 507 ADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 507 ~~~~~~al~l~p~~~~~~ 524 (527)
++.|+++++++|++..++
T Consensus 130 ~~~l~~al~~dP~~~~al 147 (198)
T PRK10370 130 REMIDKALALDANEVTAL 147 (198)
T ss_pred HHHHHHHHHhCCCChhHH
Confidence 999999999999988764
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.2e-10 Score=107.70 Aligned_cols=108 Identities=11% Similarity=0.135 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCH---HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHH---H
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP---TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWST---A 489 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~---~ 489 (527)
..+..++.+|..++..|+|++|+..|++++...|. ++ .+++.+|.+|+.+|++++|+..++++++..|+++. +
T Consensus 31 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 109 (235)
T TIGR03302 31 WPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYA 109 (235)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHH
Confidence 34678899999999999999999999999999887 54 68899999999999999999999999999998876 7
Q ss_pred HHHHHHHHHHc--------CChHHHHHHHHHHHcccccccccc
Q 009750 490 FYMQAVALAKL--------DMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 490 ~~~~g~~~~~~--------~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
++.+|.+++.. |++++|+..|+++++.+|++..+|
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 152 (235)
T TIGR03302 110 YYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSEYAP 152 (235)
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCChhHH
Confidence 99999999987 899999999999999999987654
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.3e-10 Score=104.89 Aligned_cols=132 Identities=9% Similarity=0.048 Sum_probs=98.1
Q ss_pred eEEEEEecCCCCCceEEEEEEcCcCCCC-----------ChHHHHHHHHHhhcCCCCc--cceeEEEEEe-----CCeee
Q 009750 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-----------DPKQFADEAWGVGKLRHKR--LANLIGYCCD-----GDERL 146 (527)
Q Consensus 85 ~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~-----~~~~~ 146 (527)
.|++... .|+.|.||+....... ....+.+|...+.+|..-+ +..++++.+. ...-+
T Consensus 37 rvvr~~~-----~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~ 111 (268)
T PRK15123 37 RTLRFEL-----AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSF 111 (268)
T ss_pred eEEEEEE-----CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeE
Confidence 4667665 5677999977543311 1124889999998884333 3444555543 23468
Q ss_pred EEEEecCCC-CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-------CCCceeeccc
Q 009750 147 LVAEYMPND-TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-------NGDPRLSCFG 218 (527)
Q Consensus 147 lv~E~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-------~~~~kl~DFG 218 (527)
||||++++. +|.+++........+...+..++.+|+..+.-||..| |+|+|+++.|||++. ++.+.|+||+
T Consensus 112 LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G-i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~ 190 (268)
T PRK15123 112 IITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG-INHRDCYICHFLLHLPFPGREEDLKLSVIDLH 190 (268)
T ss_pred EEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc-CccCCCChhhEEEeccccCCCCCceEEEEECC
Confidence 999999986 8999986433345667778899999999999999999 999999999999975 4679999999
Q ss_pred Cccc
Q 009750 219 LMKN 222 (527)
Q Consensus 219 ~a~~ 222 (527)
.+..
T Consensus 191 r~~~ 194 (268)
T PRK15123 191 RAQI 194 (268)
T ss_pred cccc
Confidence 8754
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3e-10 Score=97.59 Aligned_cols=86 Identities=15% Similarity=0.087 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
..+...+..+|.++...|+|++|+..|++|++++|. ++.+++++|.|+..+|++++|+..|++++++.|+++..+.++|
T Consensus 55 P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~~~~~ 133 (144)
T PRK15359 55 PWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQ 133 (144)
T ss_pred CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 356899999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcC
Q 009750 495 VALAKLD 501 (527)
Q Consensus 495 ~~~~~~~ 501 (527)
.+...++
T Consensus 134 ~~~~~l~ 140 (144)
T PRK15359 134 NAQIMVD 140 (144)
T ss_pred HHHHHHH
Confidence 9887653
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.1e-09 Score=87.59 Aligned_cols=105 Identities=17% Similarity=0.179 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc----HHH
Q 009750 414 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----STA 489 (527)
Q Consensus 414 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~----~~~ 489 (527)
.++.+..+-.+|..+.+.|+.+.|++.|.+||.+.|. ++.+|+|++.++.-.|+.++|+.++.+|+++.-+. ..+
T Consensus 39 ~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa 117 (175)
T KOG4555|consen 39 AIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQA 117 (175)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHH
Confidence 3455677888999999999999999999999999999 99999999999999999999999999999997654 568
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 490 FYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 490 ~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
|..+|.+|..+|+-+.|..+|+.|.+|...
T Consensus 118 ~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~ 147 (175)
T KOG4555|consen 118 FVQRGLLYRLLGNDDAARADFEAAAQLGSK 147 (175)
T ss_pred HHHHHHHHHHhCchHHHHHhHHHHHHhCCH
Confidence 999999999999999999999999887654
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.1e-10 Score=120.74 Aligned_cols=108 Identities=5% Similarity=-0.109 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
++++.++.+|.+..+.|.|++|+..++.+++++|+ +..++.+++.++.+++++++|+..+++++..+|+++.+++.+|.
T Consensus 84 ~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~~~a~ 162 (694)
T PRK15179 84 HTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREILLEAK 162 (694)
T ss_pred ccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 33666666666666666666666666666666666 66666666666666666666666666666666666666666666
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
++.++|+|++|++.|++++.-+|++..+|
T Consensus 163 ~l~~~g~~~~A~~~y~~~~~~~p~~~~~~ 191 (694)
T PRK15179 163 SWDEIGQSEQADACFERLSRQHPEFENGY 191 (694)
T ss_pred HHHHhcchHHHHHHHHHHHhcCCCcHHHH
Confidence 66666666666666666666666554443
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.8e-10 Score=95.08 Aligned_cols=99 Identities=7% Similarity=-0.059 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
...+..|..|..+|..|+|++|...|+-....+|. ++..|+.+|.|+..+++|++|+..|..|..+++++|..++..|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 55888999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHc
Q 009750 496 ALAKLDMHKDAADMLKEAAS 515 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~ 515 (527)
||+.+|+.++|+..|+.+++
T Consensus 114 C~l~l~~~~~A~~~f~~a~~ 133 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNE 133 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999998
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.2e-10 Score=119.96 Aligned_cols=104 Identities=13% Similarity=0.004 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..+..+|.++...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..++++++++|+++.+++.++.+
T Consensus 337 ~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~~ 415 (553)
T PRK12370 337 NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWI 415 (553)
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 4566666777777777777777777777777777 777777777777777777777777777777777777766666666
Q ss_pred HHHcCChHHHHHHHHHHHccc-cccc
Q 009750 497 LAKLDMHKDAADMLKEAASLE-EKRQ 521 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~-p~~~ 521 (527)
++.+|++++|+..++++++.+ |++.
T Consensus 416 ~~~~g~~eeA~~~~~~~l~~~~p~~~ 441 (553)
T PRK12370 416 TYYHTGIDDAIRLGDELRSQHLQDNP 441 (553)
T ss_pred HHhccCHHHHHHHHHHHHHhccccCH
Confidence 777777777777777777654 4443
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.9e-10 Score=83.29 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=60.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcH
Q 009750 422 RKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 487 (527)
Q Consensus 422 ~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~ 487 (527)
+.+|..+++.|+|++|+..|+++++.+|. +..+|+.+|.+++.+|++++|+..|+++++++|++|
T Consensus 1 ~~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 1 YALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 46899999999999999999999999999 999999999999999999999999999999999986
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.2e-10 Score=111.08 Aligned_cols=106 Identities=16% Similarity=0.176 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
++++...|.-++-.|++-.|-..|+.+|+++|. +...|-.+|.+|....+-++-.++|.+|..++|+|++.||.+|..+
T Consensus 326 A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~ 404 (606)
T KOG0547|consen 326 AEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMR 404 (606)
T ss_pred HHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHH
Confidence 788889999999999999999999999999999 7777999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHcccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+-+++|++|+.+|++|+.|+|+|.-++
T Consensus 405 flL~q~e~A~aDF~Kai~L~pe~~~~~ 431 (606)
T KOG0547|consen 405 FLLQQYEEAIADFQKAISLDPENAYAY 431 (606)
T ss_pred HHHHHHHHHHHHHHHHhhcChhhhHHH
Confidence 999999999999999999999986543
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.08 E-value=1e-09 Score=97.88 Aligned_cols=127 Identities=18% Similarity=0.174 Sum_probs=83.7
Q ss_pred eEEEEEecCCCCCceEEEEEEcCcCCCC---------------------C-----hHHHHHHHHHhhcCCCC--ccceeE
Q 009750 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP---------------------D-----PKQFADEAWGVGKLRHK--RLANLI 136 (527)
Q Consensus 85 ~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~H~--nIv~l~ 136 (527)
.||.|... +|..+|||+.+..... . .....+|.+.|.++..- ++.+++
T Consensus 1 ~Vy~~~~~----~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~ 76 (188)
T PF01163_consen 1 DVYHAIDP----DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPY 76 (188)
T ss_dssp EEEEEEEC----TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EE
T ss_pred CEEEEECC----CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEE
Confidence 38999887 5678999998643111 0 12467899999999755 566776
Q ss_pred EEEEeCCeeeEEEEecC--CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHH-hhhCCCccccccCCCceEeCCCCCce
Q 009750 137 GYCCDGDERLLVAEYMP--NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDY-CSSEGRPLYHDLNAYRVLFDENGDPR 213 (527)
Q Consensus 137 ~~~~~~~~~~lv~E~~~--~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~-lH~~~~ivH~Dlkp~NIll~~~~~~k 213 (527)
++. ..+|||||++ |..+..+.. ..++......++.+++..+.. +|..| +||+||.+.|||++++ .+.
T Consensus 77 ~~~----~~~ivME~I~~~G~~~~~l~~----~~~~~~~~~~~~~~il~~~~~~~~~~g-ivHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 77 DYN----RNVIVMEYIGEDGVPLPRLKD----VDLSPEEPKELLEEILEEIIKMLHKAG-IVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp EEE----TTEEEEE--EETTEEGGCHHH----CGGGGSTHHHHHHHHHHHHHHHHHCTT-EEESS-STTSEEEETT-CEE
T ss_pred EEe----CCEEEEEecCCCccchhhHHh----ccccchhHHHHHHHHHHHHHHHHHhcC-ceecCCChhhEEeecc-eEE
Confidence 553 3579999998 655544332 112234456677888886666 47888 9999999999999987 899
Q ss_pred eecccCccccCC
Q 009750 214 LSCFGLMKNSRD 225 (527)
Q Consensus 214 l~DFG~a~~~~~ 225 (527)
|+|||.+.....
T Consensus 147 iIDf~qav~~~~ 158 (188)
T PF01163_consen 147 IIDFGQAVDSSH 158 (188)
T ss_dssp E--GTTEEETTS
T ss_pred EEecCcceecCC
Confidence 999999876543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.6e-09 Score=101.03 Aligned_cols=108 Identities=15% Similarity=0.064 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhC--CCcHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY--PDWSTAFYMQ 493 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~--p~~~~~~~~~ 493 (527)
.+...+...|..++..|++++|++.|+++++..|. +..++.++|.++...|++++|++.++++++.. +.....++.+
T Consensus 63 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l 141 (234)
T TIGR02521 63 DDYLAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLENA 141 (234)
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHHHH
Confidence 34778888999999999999999999999999998 88999999999999999999999999999854 5677899999
Q ss_pred HHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 494 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 494 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|.++...|++++|+..|+++++.+|++...|
T Consensus 142 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 172 (234)
T TIGR02521 142 GLCALKAGDFDKAEKYLTRALQIDPQRPESL 172 (234)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCcCChHHH
Confidence 9999999999999999999999999876544
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 527 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 5e-27 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 3e-26 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 6e-25 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-24 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-22 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-22 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 4e-22 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-20 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 3e-10 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 3e-10 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 3e-10 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 5e-10 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 1e-09 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-09 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-09 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-09 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-09 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-09 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 4e-09 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 6e-09 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 6e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 6e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 6e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 7e-09 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 8e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 8e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 8e-09 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 9e-09 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 1e-08 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 1e-08 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 1e-08 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-08 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-08 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 2e-08 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-08 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 2e-08 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-08 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 2e-08 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-08 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-08 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-08 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 2e-08 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 2e-08 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-08 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-08 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-08 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-08 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 2e-08 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-08 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 2e-08 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 2e-08 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 2e-08 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 2e-08 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-08 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-08 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 2e-08 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 3e-08 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-08 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-08 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-08 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 3e-08 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-08 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 3e-08 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 3e-08 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 3e-08 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 3e-08 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 3e-08 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 4e-08 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 4e-08 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 4e-08 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-08 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 4e-08 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 5e-08 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 5e-08 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 6e-08 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 6e-08 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 6e-08 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 7e-08 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 7e-08 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 7e-08 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 7e-08 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 9e-08 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 9e-08 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 9e-08 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 9e-08 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 9e-08 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 9e-08 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 9e-08 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 9e-08 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 1e-07 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 1e-07 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-07 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 1e-07 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 1e-07 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 1e-07 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-07 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-07 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 1e-07 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 1e-07 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 2e-07 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-07 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-07 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 2e-07 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 2e-07 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 2e-07 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 2e-07 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 2e-07 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-07 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-07 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-07 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 2e-07 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 2e-07 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-07 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-07 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 3e-07 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-07 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 3e-07 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 3e-07 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 3e-07 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 3e-07 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-07 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-07 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-07 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 3e-07 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 3e-07 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 3e-07 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 3e-07 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-07 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 3e-07 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 3e-07 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 3e-07 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-07 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 4e-07 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 4e-07 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 5e-07 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-07 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 6e-07 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 6e-07 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 7e-07 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 1e-06 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-06 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 1e-06 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 1e-06 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 2e-06 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 2e-06 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-06 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 2e-06 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-06 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 2e-06 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 2e-06 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-06 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-06 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 2e-06 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-06 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-06 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 3e-06 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 3e-06 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-06 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 3e-06 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 3e-06 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 3e-06 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 3e-06 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 3e-06 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 3e-06 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 4e-06 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 4e-06 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 4e-06 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 4e-06 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 4e-06 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 4e-06 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 4e-06 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 5e-06 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 5e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 6e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 6e-06 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 6e-06 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 6e-06 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 7e-06 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 7e-06 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 7e-06 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 7e-06 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 7e-06 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 8e-06 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 8e-06 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 8e-06 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 8e-06 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 8e-06 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 8e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 9e-06 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 9e-06 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 9e-06 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 1e-05 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-05 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 1e-05 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-05 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 1e-05 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 1e-05 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 1e-05 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 1e-05 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 1e-05 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 1e-05 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-05 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-05 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 1e-05 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-05 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-05 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 1e-05 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 2e-05 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 2e-05 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 2e-05 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 2e-05 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-05 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 2e-05 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-05 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 2e-05 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-05 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 2e-05 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 2e-05 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 2e-05 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-05 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-05 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 3e-05 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 3e-05 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 3e-05 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 3e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 4e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-05 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 4e-05 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 4e-05 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 4e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 4e-05 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 4e-05 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-05 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 5e-05 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 5e-05 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 5e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 5e-05 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 5e-05 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 5e-05 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 5e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 5e-05 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 5e-05 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 5e-05 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 5e-05 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 5e-05 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 5e-05 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 5e-05 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 5e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 6e-05 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 6e-05 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 6e-05 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 6e-05 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-05 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-05 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 7e-05 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 7e-05 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 7e-05 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 8e-05 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 9e-05 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 9e-05 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 1e-04 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 1e-04 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 1e-04 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 1e-04 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 1e-04 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 1e-04 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 2e-04 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 2e-04 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 2e-04 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 2e-04 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-04 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 2e-04 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 2e-04 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 3e-04 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 3e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-04 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 3e-04 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 3e-04 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 4e-04 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 4e-04 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 5e-04 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 5e-04 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 5e-04 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 6e-04 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 6e-04 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 7e-04 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 7e-04 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 7e-04 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 208 bits (533), Expect = 1e-63
Identities = 80/315 (25%), Positives = 139/315 (44%), Gaps = 49/315 (15%)
Query: 57 FSLADLRAATNNFSSDFIVSES---GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
FS +L+ TNNF I GE VVYKG + + +AVKK
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTT----VAVKKLAAMVDIT 69
Query: 114 PKQ----FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-T 168
++ F E + K +H+ L L+G+ DGD+ LV YMPN +L L +
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 169 IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR------VLFDENGDPRLSCFGLMK- 221
+ W MR ++A A +++ L+ + + +R +L DE ++S FGL +
Sbjct: 130 LSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 222 NSRDGKSY-STNLA----YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK----HIPPSH 272
+ + ++ ++ + Y PE LR G +TP+S I+SFG VLL++++G
Sbjct: 183 SEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
Query: 273 DMVVWNTVPIKFNFGALDMIR-GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRE 331
++ ++ K I +D + + S ++ +AS+CL + +
Sbjct: 242 LLLDI----------KEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNK 290
Query: 332 RPNTKDLVSTLAPLQ 346
RP+ K + L +
Sbjct: 291 RPDIKKVQQLLQEMT 305
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 5e-63
Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 35/304 (11%)
Query: 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPK 115
FSL +L+ A++NFS+ I+ G VYKGRL DG +AVK+ +
Sbjct: 20 FSLRELQVASDNFSNKNILGRGGF---GKVYKGRLADG----TLVAVKRLKEERTQGGEL 72
Query: 116 QFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF--HWENQTIEWAM 173
QF E + H+ L L G+C ERLLV YM N ++A L ++W
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 174 RLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY-S 230
R R+AL A L Y P ++ D+ A +L DE + + FGL K ++ +
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 192
Query: 231 TNLA----YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK-----HIPPSHD---MVVWN 278
T + + PEYL G+ + ++ +F +G +LL+L++G+ + D ++ W
Sbjct: 193 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW- 251
Query: 279 TVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+++ K + L+D L+GN+ EE + +A C Q P ERP ++
Sbjct: 252 ---------VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
Query: 339 VSTL 342
V L
Sbjct: 303 VRML 306
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 1e-61
Identities = 86/323 (26%), Positives = 144/323 (44%), Gaps = 33/323 (10%)
Query: 35 SNGTEGSGGLAAGSDGAPAFA-EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQD 93
S T + S P + L DL ATNNF F++ VYKG L+D
Sbjct: 6 SKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVF---GKVYKGVLRD 62
Query: 94 GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153
G +A+K+ T + ++F E + RH L +LIG+C + +E +L+ +YM
Sbjct: 63 GAK----VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118
Query: 154 NDTLAKHLFHWENQTI--EWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD 211
N L +HL+ + T+ W RL + + A L Y ++ D+ + +L DEN
Sbjct: 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL-HTRAIIHRDVKSINILLDENFV 177
Query: 212 PRLSCFGLMK-NSRDGKSY-STNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSG 265
P+++ FG+ K + +++ ST + T PEY GR+T +S ++SFG VL ++L
Sbjct: 178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
Query: 266 K----HIPPSHDM--VVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 319
+ P + W A++ + ++D +L E D
Sbjct: 238 RSAIVQSLPREMVNLAEW----------AVESHNNGQLEQIVDPNLADKIRPESLRKFGD 287
Query: 320 LASRCLQYEPRERPNTKDLVSTL 342
A +CL +RP+ D++ L
Sbjct: 288 TAVKCLALSSEDRPSMGDVLWKL 310
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 1e-28
Identities = 48/325 (14%), Positives = 99/325 (30%), Gaps = 44/325 (13%)
Query: 56 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPK 115
+ +L + + + V+K +L + +AVK F
Sbjct: 13 DLGTENLYFQSMPLQLLEVKARGRFG---CVWKAQLLNEY-----VAVKIFPIQDK-QSW 63
Query: 116 QFADEAWGVGKLRHKRLANLIGYCCDGD----ERLLVAEYMPNDTLAKHLFHWENQTIEW 171
Q E + + ++H+ + IG G + L+ + +L+ L + W
Sbjct: 64 QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---ANVVSW 120
Query: 172 AMRLRVALYIAEALDY-------CSSEGRPLY-H-DLNAYRVLFDENGDPRLSCFGLMKN 222
+A +A L Y +P H D+ + VL N ++ FGL
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 223 SRDGKSYSTNLA------YTPPEYLRNGRVTPESV-----IFSFGTVLLDLLSGK----H 267
GKS Y PE L +++ G VL +L S
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
Query: 268 IPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DLASRCLQ 326
+ + + +L+ ++ + L + + + C
Sbjct: 241 PVDEYMLPFEEEIG---QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD 297
Query: 327 YEPRERPNTKDLVSTLAPLQNRPDV 351
++ R + + + +Q ++
Sbjct: 298 HDAEARLSAGCVGERITQMQRLTNI 322
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-25
Identities = 54/277 (19%), Positives = 101/277 (36%), Gaps = 43/277 (15%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
++KGR Q GND I VK W + F +E + H + ++G C
Sbjct: 25 ELWKGRWQ-GND----IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP 79
Query: 143 DERLL--VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DL 199
+ +MP +L L N ++ + ++ AL +A + + + + L
Sbjct: 80 PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHAL 139
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESV---IFSFG 256
N+ V+ DE+ R+S + K S A+ PE L+ ++SF
Sbjct: 140 NSRSVMIDEDMTARISMADV-KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA 198
Query: 257 TVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL-----MDSHLEGNFSS 311
+L +L++ + P D+ + + M L + H+
Sbjct: 199 VLLWELVTRE--VPFADL----------SNMEIGMKVALEGLRPTIPPGISPHVS----- 241
Query: 312 EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348
L C+ +P +RP +V L +Q++
Sbjct: 242 -------KLMKICMNEDPAKRPKFDMIVPILEKMQDK 271
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 3e-24
Identities = 59/311 (18%), Positives = 96/311 (30%), Gaps = 55/311 (17%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
K + + +K+ + + F E + L H + IG
Sbjct: 26 AIKVTH---RETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL 82
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
+ EY+ TL + + W+ R+ A IA + Y S + H DLN++
Sbjct: 83 NFITEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHS--MNIIHRDLNSHNC 139
Query: 205 LFDENGDPRLSCFGL----------------MKNSRDGKSYST--NLAYTPPEYLRNGRV 246
L EN + ++ FGL +K K Y+ N + PE +
Sbjct: 140 LVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY 199
Query: 247 TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306
+ +FSFG VL +++ + P + G LD N
Sbjct: 200 DEKVDVFSFGIVLCEIIGRVNADPDYLPR--TMDFGLNVRGFLDRYCPPNCP-------- 249
Query: 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAP 366
F + RC +P +RP+ L L L+ P
Sbjct: 250 --------PSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA------------GHLP 289
Query: 367 PTPQHPLSPMG 377
PQ G
Sbjct: 290 LGPQLEQLDRG 300
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 8e-23
Identities = 58/277 (20%), Positives = 110/277 (39%), Gaps = 44/277 (15%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYCCDG 142
V++ G+D +AVK + + +F E + +LRH + +G
Sbjct: 52 TVHRAEWH-GSD----VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106
Query: 143 DERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
+V EY+ +L + L + ++ RL +A +A+ ++Y + P+ H +L
Sbjct: 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLK 166
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIFSFG 256
+ +L D+ ++ FGL + S + A TP PE LR+ +S ++SFG
Sbjct: 167 SPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 257 TVLLDLLSGKHIPPSHDM----VVWNTVPIKFNFGALDMIRG--KNILHLMDSHLEGNFS 310
+L +L + + P ++ VV F L++ R + ++
Sbjct: 227 VILWELATLQ--QPWGNLNPAQVVAAVG---FKCKRLEIPRNLNPQVAAII--------- 272
Query: 311 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347
C EP +RP+ ++ L PL
Sbjct: 273 -----------EGCWTNEPWKRPSFATIMDLLRPLIK 298
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 2e-22
Identities = 57/302 (18%), Positives = 113/302 (37%), Gaps = 48/302 (15%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VV K + + + +A+K+ + K F E + ++ H + L G C +
Sbjct: 23 VVCKAKWRA-----KDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--P 73
Query: 145 RLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNA 201
LV EY +L L E A + L ++ + Y S + + L H DL
Sbjct: 74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 133
Query: 202 YRVLFDENGD-PRLSCFGLMKNSRDGKSYSTN----LAYTPPEYLRNGRVTPESVIFSFG 256
+L G ++ FG + D +++ TN A+ PE + + +FS+G
Sbjct: 134 PNLLLVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG 190
Query: 257 TVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATV 316
+L ++++ + P ++ + + + R ++ + +E
Sbjct: 191 IILWEVITRRK--PFDEI---GGPAFRIMWAVHNGTR-PPLIKNLPKPIE---------- 234
Query: 317 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPM 376
L +RC +P +RP+ +++V + L P +E P P
Sbjct: 235 --SLMTRCWSKDPSQRPSMEEIVKIMTHLMRY----------FPGADEPLQYPCQHSLPP 282
Query: 377 GD 378
G+
Sbjct: 283 GE 284
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 3e-22
Identities = 57/280 (20%), Positives = 106/280 (37%), Gaps = 45/280 (16%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-------KQFADEAWGVGKLRHKRLANLIG 137
+V+KGRL +A+K ++F E + + L H + L G
Sbjct: 34 LVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG 90
Query: 138 YCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
+ +V E++P L L + I+W+++LR+ L IA ++Y ++ P+ H
Sbjct: 91 LMHNPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVH 147
Query: 198 -DLNAYRVLFDENGDPRLSC-----FGLMKNSRDGKSYST----NLAYTPPEYL--RNGR 245
DL + + + C FGL S+ + N + PE +
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305
T ++ +SF +L +L+G+ P + + IKF + I L
Sbjct: 205 YTEKADTYSFAMILYTILTGEG--PFDEY---SYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
++ C +P++RP+ +V L+ L
Sbjct: 260 R------------NVIELCWSGDPKKRPHFSYIVKELSEL 287
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 1e-21
Identities = 58/280 (20%), Positives = 106/280 (37%), Gaps = 51/280 (18%)
Query: 86 VYKGRLQDGNDNRRW---IAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYCC 140
VYKG+ W +AVK A + F +E + K RH + +G
Sbjct: 40 VYKGK---------WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YS 89
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DL 199
+ +V ++ +L HL H E + +A A +DY + + H DL
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYL--HAKSIIHRDL 146
Query: 200 NAYRVLFDENGDPRLSCFGL--MKNSRDGKSYSTN----LAYTPPEYLRNGRVTPESV-- 251
+ + E+ ++ FGL K+ G + + PE +R P S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 252 -IFSFGTVLLDLLSGKHIP----PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306
+++FG VL +L++G+ +P + D ++ G+ L S +
Sbjct: 207 DVYAFGIVLYELMTGQ-LPYSNINNRDQIIEMV--------------GRGSLSPDLSKVR 251
Query: 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346
N + L + CL+ + ERP+ +++ + L
Sbjct: 252 SNCPKR----MKRLMAECLKKKRDERPSFPRILAEIEELA 287
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 1e-21
Identities = 67/360 (18%), Positives = 117/360 (32%), Gaps = 73/360 (20%)
Query: 56 EFSLADLRAATNNFSSDFIVSE--SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD 113
E + ++ +N ++ G VYKG L + R +AVK F+ +
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDE-----RPVAVKVFSFA---N 48
Query: 114 PKQFADEA--WGVGKLRHKRLANLIGYCCDGD-----ERLLVAEYMPNDTLAKHLFHWEN 166
+ F +E + V + H +A I E LLV EY PN +L K+L
Sbjct: 49 RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SL 105
Query: 167 QTIEWAMRLRVALYIAEALDYCSSEGRPLYH--------DLNAYRVLFDENGDPRLSCFG 218
T +W R+A + L Y +E H DLN+ VL +G +S FG
Sbjct: 106 HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165
Query: 219 L--------MKNSRDGKSYSTNLA----YTPPEYLRN-------GRVTPESVIFSFGTVL 259
L + + + + + Y PE L + +++ G +
Sbjct: 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIY 225
Query: 260 LDLLSGK------HIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE 313
++ P + M V F + ++ + +
Sbjct: 226 WEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRP---KFPEAWKENS 282
Query: 314 ATV--VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQH 371
V + + C + R + +A L M+ R++ PT H
Sbjct: 283 LAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL----------MMIWERNKSVSPTAHH 332
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 5e-20
Identities = 53/278 (19%), Positives = 92/278 (33%), Gaps = 51/278 (18%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP----KQFADEAWGVGKLRHKRLANLIGYCC 140
VY+ G++ +AVK D + EA L+H + L G C
Sbjct: 22 KVYRAFWI-GDE----VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL 76
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYH-D 198
LV E+ L + L + I + + A+ IA ++Y E P+ H D
Sbjct: 77 KEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRD 133
Query: 199 LNAYRVLFDENGDPRLSC--------FGL--MKNSRDGKSYSTNLAYTPPEYLRNGRVTP 248
L + +L + + FGL + S + A+ PE +R +
Sbjct: 134 LKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSK 193
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN----ILHLMDSH 304
S ++S+G +L +LL+G+ P + + I
Sbjct: 194 GSDVWSYGVLLWELLTGE--VPFRGID---------GLAVAYGVAMNKLALPIPSTCPEP 242
Query: 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
L C +P RP+ +++ L
Sbjct: 243 FA------------KLMEDCWNPDPHSRPSFTNILDQL 268
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 5e-19
Identities = 52/297 (17%), Positives = 92/297 (30%), Gaps = 64/297 (21%)
Query: 85 VVYKGRLQDGNDNRRW---IAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYC 139
VY GR W +A++ + K F E + RH+ + +G C
Sbjct: 48 QVYHGR---------WHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-D 198
++ TL + ++ ++A I + + Y + + H D
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYL--HAKGILHKD 155
Query: 199 LNAYRVLFDEN----GDPRLSCFGL--MKNSRDGKSYSTNL-------AYTPPEYLRNGR 245
L + V +D D FGL + L + PE +R
Sbjct: 156 LKSKNVFYDNGKVVITD-----FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 246 VTPESV---------IFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296
E +F+ GT+ +L + + P + T P + + G
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHARE-WP-------FKTQP---AEAIIWQM-GTG 258
Query: 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPS 353
+ + + E + D+ C +E ERP L+ L L R S
Sbjct: 259 MKPNL---SQIGMGKE----ISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLS 308
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 2e-16
Identities = 63/273 (23%), Positives = 101/273 (36%), Gaps = 35/273 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+ GRL+ N +AVK + +F EA + + H + LIG C
Sbjct: 130 VFSGRLRADNTL---VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 186
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
+V E + L E + L++ A ++Y E + H DL A
Sbjct: 187 IYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYL--ESKCCIHRDLAARN 243
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLRNGRVTPESVIFSFGT 257
L E ++S FG+ + DG ++ +T PE L GR + ES ++SFG
Sbjct: 244 CLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGI 303
Query: 258 VLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATV 316
+L + S P P+ N + + L +
Sbjct: 304 LLWETFSLGASPYPNLS-----------NQQTREFVEKGGRLPCPELC---------PDA 343
Query: 317 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349
VF L +C YEP +RP+ + L ++ R
Sbjct: 344 VFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 6e-16
Identities = 53/298 (17%), Positives = 101/298 (33%), Gaps = 47/298 (15%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEA--WGVGKLRHKRLANLIGYCCDGD 143
V+ G+ + +AVK F + + E + +RH+ + I G
Sbjct: 53 VWMGKWRGEK-----VAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAADIKGT 104
Query: 144 ER----LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-- 197
L+ +Y N +L +L ++ T++ L++A L + +E
Sbjct: 105 GSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161
Query: 198 -----DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--------LAYTPPEYLRNG 244
DL + +L +NG ++ GL + Y PPE L +
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL-DE 220
Query: 245 RVTPESV-------IFSFGTVLLDLLSGK---HIPPSHDMVVWNTVPIKFNFGALDMIRG 294
+ ++SFG +L ++ I + + + VP ++ + I
Sbjct: 221 SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVC 280
Query: 295 KNILHLMDSHLEGNFSSEEATVVF-DLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 351
L +SS+E L + C + P R + TLA + D+
Sbjct: 281 IKKLRP---SFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 8e-16
Identities = 55/279 (19%), Positives = 109/279 (39%), Gaps = 33/279 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY+G + + +AVK K + ++F EA + +++H L L+G C
Sbjct: 28 EVYEGVWKKYSLT---VAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
++ E+M L +L Q + + L +A I+ A++Y + H DL A
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARN 141
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTV 258
L EN +++ FGL + + A +T PE L + + +S +++FG +
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 259 LLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVV 317
L ++ + P P D +++ + + + V
Sbjct: 202 LWEIATYGMSPYPGID-----------LSQVYELLEKDYRMERPE-----GCPEK----V 241
Query: 318 FDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVM 356
++L C Q+ P +RP+ ++ + + V
Sbjct: 242 YELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 280
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 1e-15
Identities = 64/285 (22%), Positives = 111/285 (38%), Gaps = 40/285 (14%)
Query: 86 VYKGRLQDGNDNRRW----IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD 141
++KG ++ D + + +K K + F + A + KL HK L G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
GDE +LV E++ +L +L I +L VA +A A+ + L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140
Query: 201 AYRVL-----FDENGDPR---LSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRV-TPESV 251
A +L + G+P LS G+ + + PPE + N + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 252 IFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310
+SFGT L ++ SG P + D + L ++ L
Sbjct: 201 KWSFGTTLWEICSGGDKPLSALD-----------SQRKLQFYEDRHQL-----------P 238
Query: 311 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYV 355
+ +A + +L + C+ YEP RP+ + ++ L L VP
Sbjct: 239 APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGS 283
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 76.4 bits (188), Expect = 2e-15
Identities = 50/297 (16%), Positives = 100/297 (33%), Gaps = 45/297 (15%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEA--WGVGKLRHKRLANLIGYCCDGD 143
V++G+ + +AVK F+ + + + EA + LRH+ + I +
Sbjct: 58 VWRGKWRG-----EEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109
Query: 144 ----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-- 197
+ LV++Y + +L +L T+ +++AL A L + E
Sbjct: 110 GTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 198 -----DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA--------YTPPEYLRNG 244
DL + +L +NG ++ GL Y PE L +
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226
Query: 245 RVTPESV------IFSFGTVLLDLLSGKHI---PPSHDMVVWNTVPIKFNFGALDMIRGK 295
I++ G V ++ I + + ++ VP + + + +
Sbjct: 227 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 286
Query: 296 NILHLMDSHLEGNFSSEEATVVF-DLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 351
L ++ + S EA V + C R + TL+ L + +
Sbjct: 287 QKLRP---NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 3e-15
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALR 474
M + E +++G+ A A+ CYS+ I + + +Y+ RS + A
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYE 59
Query: 475 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
D + + PDW + +A AL L+ ++A +E E
Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 4e-15
Identities = 66/275 (24%), Positives = 104/275 (37%), Gaps = 34/275 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V+ G +A+K K P+ F EA + KLRH++L L +
Sbjct: 200 VWMGTWNGTTR----VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPI 253
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
+V EYM +L L + + + +A IA + Y H DL A +
Sbjct: 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANI 311
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVL 259
L EN +++ FGL + D + + A +T PE GR T +S ++SFG +L
Sbjct: 312 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 371
Query: 260 LDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 319
+L + +P P N LD + + + D
Sbjct: 372 TELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP-----ECPES----LHD 412
Query: 320 LASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSY 354
L +C + EP ERP + L + L + P Y
Sbjct: 413 LMCQCWRKEPEERPTFEYLQAFLEDYFTSTE-PQY 446
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 5e-15
Identities = 54/278 (19%), Positives = 106/278 (38%), Gaps = 33/278 (11%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
VY+G + + +AVK K + ++F EA + +++H L L+G C
Sbjct: 236 VYEGVWKKYSLT---VAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
++ E+M L +L Q + + L +A I+ A++Y + H +L A
Sbjct: 292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNC 349
Query: 205 LFDENGDPRLSCFGL---MKNSRDGKSYSTNLAY--TPPEYLRNGRVTPESVIFSFGTVL 259
L EN +++ FGL M T PE L + + +S +++FG +L
Sbjct: 350 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 409
Query: 260 LDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF 318
++ + P P D +++ + + + V+
Sbjct: 410 WEIATYGMSPYPGID-----------LSQVYELLEKDYRMERPE-----GCPEK----VY 449
Query: 319 DLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVM 356
+L C Q+ P +RP+ ++ + + V
Sbjct: 450 ELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 487
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 5e-15
Identities = 56/271 (20%), Positives = 107/271 (39%), Gaps = 35/271 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VV G+ + D +AVK K +F EA + KL H +L G C
Sbjct: 23 VVKLGKWKGQYD----VAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP 77
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
+V EY+ N L +L + +E + L + + E + + S H DL A
Sbjct: 78 IYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARN 134
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTV 258
L D + ++S FG+ + D + S+ ++ PE + + +S +++FG +
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGIL 194
Query: 259 LLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVV 317
+ ++ S +P + N + + + L+ S +
Sbjct: 195 MWEVFSLGKMPYDLYT-----------NSEVVLKVSQGHRLYRPH-----LASDT----I 234
Query: 318 FDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348
+ + C P +RP + L+S++ PL+ +
Sbjct: 235 YQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 7e-15
Identities = 58/272 (21%), Positives = 106/272 (38%), Gaps = 35/272 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
+V+ G + + +A+K + + F +EA + KL H +L L G C +
Sbjct: 23 LVHLGYWLNKDK----VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 77
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
LV E+M + L+ +L + L + L + E + Y + H DL A
Sbjct: 78 ICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARN 134
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTV 258
L EN ++S FG+ + D + S+ + PE R + +S ++SFG +
Sbjct: 135 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194
Query: 259 LLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVV 317
+ ++ S IP + N ++ I L+ S+ V
Sbjct: 195 MWEVFSEGKIPYENRS-----------NSEVVEDISTGFRLYKPR-----LASTH----V 234
Query: 318 FDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349
+ + + C + P +RP L+ LA +
Sbjct: 235 YQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 266
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 1e-14
Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
E + +G+ F++ ++ TA+ Y++ + + +Y+ R+ C + AL D
Sbjct: 15 EEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTC 73
Query: 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
+ + + +A L + A ++A ++
Sbjct: 74 IRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 69/327 (21%), Positives = 114/327 (34%), Gaps = 44/327 (13%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V GRL+ + +A+K + F EA +G+ H + L G
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY-H-DLNAY 202
++V EYM N +L L + Q + + IA + Y S G Y H DL A
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAAR 176
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKS--YSTNLA-----YTPPEYLRNGRVTPESVIFSF 255
+L + N ++S FGL + D Y+T +T PE + + T S ++S+
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 256 GTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEA 314
G VL +++S G+ P +M N + + L + +
Sbjct: 237 GIVLWEVMSYGE--RPYWEMS---------NQDVIKAVDEGYRLPPPM-----DCPAA-- 278
Query: 315 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLS 374
++ L C Q + RP + +VS L L P + R +
Sbjct: 279 --LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 336
Query: 375 PMGDACSRMD--LTAIHQILVMTHYKD 399
L + H K+
Sbjct: 337 T---TFRTTGDWLNGVW----TAHCKE 356
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 54/273 (19%), Positives = 98/273 (35%), Gaps = 30/273 (10%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGDE 144
V++G + +A+K ++ F EA + + H + LIG +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENP 464
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
++ E L L + ++ A + A ++ AL Y S+ H D+ A
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTV 258
VL N +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 259 LLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF 318
+ ++L P + V N + I L + N ++
Sbjct: 582 MWEILMHGVKP-------FQGVK---NNDVIGRIENGERLPMPP-----NCPPT----LY 622
Query: 319 DLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 351
L ++C Y+P RP +L + L+ + +
Sbjct: 623 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 655
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 75.3 bits (185), Expect = 1e-14
Identities = 66/275 (24%), Positives = 104/275 (37%), Gaps = 34/275 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V+ G +A+K K P+ F EA + KLRH++L L +
Sbjct: 283 VWMGTWNGTTR----VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPI 336
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
+V EYM +L L + + + +A IA + Y H DL A +
Sbjct: 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANI 394
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVL 259
L EN +++ FGL + D + + A +T PE GR T +S ++SFG +L
Sbjct: 395 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 454
Query: 260 LDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 319
+L + +P P N LD + + + D
Sbjct: 455 TELTTKGRVP----------YPGMVNREVLDQVERGYRMPCPP-----ECPES----LHD 495
Query: 320 LASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSY 354
L +C + EP ERP + L + L + P Y
Sbjct: 496 LMCQCWRKEPEERPTFEYLQAFLEDYFTSTE-PQY 529
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-14
Identities = 58/284 (20%), Positives = 104/284 (36%), Gaps = 35/284 (12%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY G D NR A+K ++ + F E + L H + LIG +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 145 RLL-VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
+ YM + L + + + + L +A ++Y + + H DL A
Sbjct: 97 LPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQVARGMEYLAE--QKFVHRDLAAR 153
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA--------YTPPEYLRNGRVTPESVIFS 254
+ DE+ +++ FGL ++ D + YS +T E L+ R T +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 255 FGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE 313
FG +L +LL+ P D F + L +
Sbjct: 214 FGVLLWELLTRGAPPYRHID-----------PFDLTHFLAQGRRLPQPE-----YCPDS- 256
Query: 314 ATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVML 357
++ + +C + +P RP + LV + + + YV L
Sbjct: 257 ---LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHYVQL 297
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-14
Identities = 51/300 (17%), Positives = 104/300 (34%), Gaps = 34/300 (11%)
Query: 85 VVYKGRLQDGNDNRRW-IAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V+KG ++ + + +K + + D +G L H + L+G C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
LV +Y+P +L H+ + + L + IA+ + Y G + H +L A
Sbjct: 87 SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSF 255
VL +++ FG+ + + E + G+ T +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 256 GTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEAT 315
G + +L++ P + + D++ L
Sbjct: 204 GVTVWELMTFGAEP-------YAGLR---LAEVPDLLEKGERLAQPQICTI--------- 244
Query: 316 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSP 375
V+ + +C + RP K+L + + P P Y+++ P P+
Sbjct: 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP--PRYLVIKRESGPGIAPGPEPHGLT 302
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-14
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 34/295 (11%)
Query: 86 VYKGRLQDGNDNRRW-IAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VYKG L+ + + +A+K F EA +G+ H + L G
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
+++ EYM N L K L + + + + IA + Y ++ H DL A
Sbjct: 120 PMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAAR 176
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKS--YSTNLA-----YTPPEYLRNGRVTPESVIFSF 255
+L + N ++S FGL + D Y+T+ +T PE + + T S ++SF
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236
Query: 256 GTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEA 314
G V+ ++++ G+ P ++ N + I L + S
Sbjct: 237 GIVMWEVMTYGE--RPYWELS---------NHEVMKAINDGFRLPTPM-----DCPSA-- 278
Query: 315 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTP 369
++ L +C Q E RP D+VS L L PD + PR P+
Sbjct: 279 --IYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLPST 331
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 5e-14
Identities = 54/264 (20%), Positives = 99/264 (37%), Gaps = 35/264 (13%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V+ +AVK K + F EA + L+H +L L +
Sbjct: 204 VWMATYNKHTK----VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPI 257
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
++ E+M +L L E + + IAE + + H DL A +
Sbjct: 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANI 315
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVL 259
L + +++ FGL + D + + A +T PE + G T +S ++SFG +L
Sbjct: 316 LVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375
Query: 260 LDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF 318
+++++ IP P N + + + + N E ++
Sbjct: 376 MEIVTYGRIPYPGMS-----------NPEVIRALERGYRMPRPE-----NCPEE----LY 415
Query: 319 DLASRCLQYEPRERPNTKDLVSTL 342
++ RC + P ERP + + S L
Sbjct: 416 NIMMRCWKNRPEERPTFEYIQSVL 439
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 6e-14
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
E +++G+ F +++ A CY + I + Y R+LC+L QP+ AL D +A
Sbjct: 11 ELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRA 69
Query: 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
+ A + +++ + +A L+ A SL
Sbjct: 70 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 107
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 6e-14
Identities = 68/350 (19%), Positives = 127/350 (36%), Gaps = 53/350 (15%)
Query: 21 HHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLADLRAATNNFSSDFIVSESGE 80
HHH + + PT + +G+ G A +F L+ + + G+
Sbjct: 5 HHHHHHDYDIPTTENLYFQGAMGSAFEDRDPT---QFEERHLK----------FLQQLGK 51
Query: 81 KAPNVVYKGRLQDGNDNRRWI-AVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGY 138
V R DN + AVKK +H+ + + F E + L+H + G
Sbjct: 52 GNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 110
Query: 139 CCDGDER--LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
C R L+ EY+P +L +L + + I+ L+ I + ++Y + +
Sbjct: 111 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGT--KRYI 167
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY------------TPPEYLRN 243
H DL +L + ++ FGL K K Y Y PE L
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEY-----YKVKEPGESPIFWYAPESLTE 222
Query: 244 GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV-----PIKFNFGALDMIRGKNIL 298
+ + S ++SFG VL +L + S + F +++++ L
Sbjct: 223 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 282
Query: 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348
D E ++ + + C +RP+ +DL + ++++
Sbjct: 283 PRPD-----GCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 7e-14
Identities = 54/274 (19%), Positives = 97/274 (35%), Gaps = 32/274 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGD 143
V++G + +A+K ++ F EA + + H + LIG +
Sbjct: 30 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITEN 88
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
++ E L L + ++ A + A ++ AL Y S+ H D+ A
Sbjct: 89 PVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESKR--FVHRDIAAR 145
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGT 257
VL N +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 205
Query: 258 VLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATV 316
+ ++L G P + N + I L + N
Sbjct: 206 CMWEILMHGV--KPFQGVK---------NNDVIGRIENGERLPMPP-----NCPPT---- 245
Query: 317 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 350
++ L ++C Y+P RP +L + L+ +
Sbjct: 246 LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 8e-14
Identities = 20/99 (20%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQ 478
L + +G+ F++ ++ A+ Y++ I +Y+ R+ C+ + AL+D +
Sbjct: 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEE 75
Query: 479 AQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
+ P + + +A AL + + A D+ ++A L+
Sbjct: 76 CIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 8e-14
Identities = 59/273 (21%), Positives = 101/273 (36%), Gaps = 39/273 (14%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V G + +AVK A + F EA + +LRH L L+G +
Sbjct: 36 DVMLGDYRG-----NKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 88
Query: 145 RL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
L +V EYM +L +L + L+ +L + EA++Y H DL A
Sbjct: 89 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAAR 146
Query: 203 RVLFDENGDPRLSCFGLMKNSRDG--KSYSTNLAY--TPPEYLRNGRVTPESVIFSFGTV 258
VL E+ ++S FGL +++ + L T PE LR + + +S ++SFG +
Sbjct: 147 NVLVSEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 203
Query: 259 LLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVV 317
L ++ S +P P + + + D V
Sbjct: 204 LWEIYSFGRVPYPRIP-----------LKDVVPRVEKGYKMDAPD-----GCPPA----V 243
Query: 318 FDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 350
+++ C + RP+ L L ++
Sbjct: 244 YEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL 276
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 9e-14
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 413 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAA 472
++ E + + + F+ K+++ A+ YSQ I++ + Y RSL +L + A
Sbjct: 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL-NPSNAIYYGNRSLAYLRTECYGYA 66
Query: 473 LRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
L DA +A + + +Y +A + L + A + ++
Sbjct: 67 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 1e-13
Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 35/265 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VV G+ + D +A+K K +F +EA + L H++L L G C
Sbjct: 39 VVKYGKWRGQYD----VAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 93
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
++ EYM N L +L + L + + EA++Y S+ H DL A
Sbjct: 94 IFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARN 150
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTV 258
L ++ G ++S FGL + D + S+ + ++PPE L + + +S I++FG +
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 210
Query: 259 LLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVV 317
+ ++ S +P N + I L+ S + V
Sbjct: 211 MWEIYSLGKMPYERFT-----------NSETAEHIAQGLRLYRPH-----LASEK----V 250
Query: 318 FDLASRCLQYEPRERPNTKDLVSTL 342
+ + C + ERP K L+S +
Sbjct: 251 YTIMYSCWHEKADERPTFKILLSNI 275
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 1e-13
Identities = 56/290 (19%), Positives = 107/290 (36%), Gaps = 41/290 (14%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY G L D + + AVK + + QF E + H + +L+G C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 145 -RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
L+V YM + L + E + L +A+ + + +S+ H DL A
Sbjct: 165 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAAR 221
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY-----------TPPEYLRNGRVTPESV 251
+ DE +++ FGL +RD + + E L+ + T +S
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 252 IFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310
++SFG +L +L++ P P + F + L +
Sbjct: 279 VWSFGVLLWELMTRGAPPYPDVN-----------TFDITVYLLQGRRLLQPE-----YCP 322
Query: 311 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 360
++++ +C + RP+ +LVS ++ + + YV +
Sbjct: 323 DP----LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNAT 368
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 65/286 (22%), Positives = 103/286 (36%), Gaps = 32/286 (11%)
Query: 86 VYKGRLQDGNDNRRWI-AVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V ND + AVK A P + E + L H+ + G C D
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 144 ER--LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
LV EY+P +L +L +I A L A I E + Y + + H DL
Sbjct: 107 AASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHA--QHYIHRDLA 161
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSY---STN----LAYTPPEYLRNGRVTPESVIF 253
A VL D + ++ FGL K +G Y + + + PE L+ + S ++
Sbjct: 162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 221
Query: 254 SFGTVLLDLLS--GKHIPPSHDMVVWNTVPIK--FNFGALDMIRGKNILHLMDSHLEGNF 309
SFG L +LL+ P + + +++ L D
Sbjct: 222 SFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDK------ 275
Query: 310 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL--QNRPDVPS 353
E V+ L C + E RP ++L+ L + + + PS
Sbjct: 276 CPAE---VYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPS 318
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 62/312 (19%), Positives = 111/312 (35%), Gaps = 54/312 (17%)
Query: 86 VYKGRLQDGNDNRRWIAVK--KFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V + +L+ + + +AVK K A D ++F EA + + H +A L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 144 ER------LLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR 193
+ +++ +M + L + +R + IA ++Y SS R
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS--R 156
Query: 194 PLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY------------TPPEY 240
H DL A + E+ ++ FGL SR YS + Y E
Sbjct: 157 NFIHRDLAARNCMLAEDMTVCVADFGL---SRK--IYSGD-YYRQGCASKLPVKWLALES 210
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILH 299
L + T S +++FG + ++++ P + N + + G N L
Sbjct: 211 LADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE-----------NAEIYNYLIGGNRLK 259
Query: 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGI 359
E V+DL +C +P++RP+ L L + V S +
Sbjct: 260 QPP-----ECMEE----VYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPL 310
Query: 360 PRHEEAPPTPQH 371
+ E H
Sbjct: 311 YINIERAHHHHH 322
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 2e-13
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
+ + G+ A KE+ A+D Y+Q + + +P + R+ + Q + A DA A
Sbjct: 13 KLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELA 71
Query: 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
V P +S A+ +A + +K A + ++ E
Sbjct: 72 TVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 3e-13
Identities = 62/304 (20%), Positives = 107/304 (35%), Gaps = 46/304 (15%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VY+G++ ++ + AVK + D F EA + K H+ + IG
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 143 DERLLVAEYMPNDTLAKHL-----FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
R ++ E M L L + ++ L VA IA Y H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE--NHFIH 163
Query: 198 -DLNAYRVLFDENGDPRLSC---FGLMKNSRDGKSYSTNLA------YTPPEYLRNGRVT 247
D+ A L G R++ FG+ ++ Y + PPE G T
Sbjct: 164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 223
Query: 248 PESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306
++ +SFG +L ++ S ++P PS N L+ + +
Sbjct: 224 SKTDTWSFGVLLWEIFSLGYMPYPSKS-----------NQEVLEFVTSGGRMDPPK---- 268
Query: 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAP 366
N V+ + ++C Q++P +RPN ++ + PDV + E
Sbjct: 269 -NCPGP----VYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-----INTALPIEYG 318
Query: 367 PTPQ 370
P +
Sbjct: 319 PLVE 322
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 3e-13
Identities = 56/269 (20%), Positives = 105/269 (39%), Gaps = 35/269 (13%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY G L D + + AVK + + QF E + H + +L+G C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 145 -RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
L+V YM + L + E + L +A+ + Y +S+ H DL A
Sbjct: 101 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAAR 157
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY--------TPPEYLRNGRVTPESVIFS 254
+ DE +++ FGL ++ D + YS + E L+ + T +S ++S
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 255 FGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE 313
FG +L +L++ P P + F + L + + +
Sbjct: 218 FGVLLWELMTRGAPPYPDVN-----------TFDITVYLLQGRRLLQPE------YCPDP 260
Query: 314 ATVVFDLASRCLQYEPRERPNTKDLVSTL 342
++++ +C + RP+ +LVS +
Sbjct: 261 ---LYEVMLKCWHPKAEMRPSFSELVSRI 286
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 69.2 bits (169), Expect = 3e-13
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
E +++G+ F +++ A CY + I + Y R+LC+L QP+ AL D +A
Sbjct: 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRA 64
Query: 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523
+ A + +++ + +A L+ A SL ++++ +
Sbjct: 65 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 3e-13
Identities = 57/291 (19%), Positives = 105/291 (36%), Gaps = 48/291 (16%)
Query: 85 VVYKGRLQDGNDNRR-WIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDG 142
V R DN +AVKK +H+ + + F E + L+H + G C
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA 83
Query: 143 DER--LLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
R L+ EY+P D L KH + I+ L+ I + ++Y + +
Sbjct: 84 GRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGMEYLGT--KRYI 136
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY------------TPPEYLRN 243
H DL +L + ++ FGL K K + + PE L
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEF-----FKVKEPGESPIFWYAPESLTE 191
Query: 244 GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV-----PIKFNFGALDMIRGKNIL 298
+ + S ++SFG VL +L + S + F +++++ L
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349
D +E ++ + + C +RP+ +DL + +++
Sbjct: 252 PRPDG------CPDE---IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 4e-13
Identities = 62/273 (22%), Positives = 103/273 (37%), Gaps = 41/273 (15%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V G +AVK A + F EA + +LRH L L+G +
Sbjct: 209 VMLGDY-----RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 261
Query: 146 L-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYR 203
L +V EYM +L +L + L+ +L + EA++Y H DL A
Sbjct: 262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARN 319
Query: 204 VLFDENGDPRLSCFGLMKNSRD--GKSYSTNLAY--TPPEYLRNGRVTPESVIFSFGTVL 259
VL E+ ++S FGL +++ + L T PE LR + + +S ++SFG +L
Sbjct: 320 VLVSEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376
Query: 260 LDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMI-RGKNILHLMDSHLEGNFSSEEATVV 317
++ S +P P + + +G + MD+ V
Sbjct: 377 WEIYSFGRVPYPRIP-----------LKDVVPRVEKG----YKMDA--PDGCPPA----V 415
Query: 318 FDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 350
+D+ C + RP L L ++
Sbjct: 416 YDVMKNCWHLDAATRPTFLQLREQLEHIRTHEL 448
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 4e-13
Identities = 62/277 (22%), Positives = 99/277 (35%), Gaps = 35/277 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V GRL+ +A+K + F EA +G+ H + L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY-H-DLNA 201
++V EYM N +L L + Q + + + + Y S G Y H DL A
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAA 179
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-------YTPPEYLRNGRVTPESVIFS 254
VL D N ++S FGL + D + +T PE + + S ++S
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWS 239
Query: 255 FGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE 313
FG V+ ++L+ G+ P +M N + + L
Sbjct: 240 FGVVMWEVLAYGE--RPYWNMT---------NRDVISSVEEGYRLPAPM-----GCPHA- 282
Query: 314 ATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 350
+ L C + +RP +VS L L P+
Sbjct: 283 ---LHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 4e-13
Identities = 60/274 (21%), Positives = 105/274 (38%), Gaps = 32/274 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGD 143
VY+G + + +AVK K D K+ F EA + L H + LIG + +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
++ E P L +L +N + + +L I +A+ Y S H D+
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGT 257
+L +L FGL + D Y ++ + PE + R T S ++ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
Query: 258 VLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATV 316
+ ++LS GK P + N + ++ + L D
Sbjct: 203 CMWEILSFGK--QPFFWLE---------NKDVIGVLEKGDRLPKPD-----LCPPV---- 242
Query: 317 VFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 350
++ L +RC Y+P +RP +LV +L+ +
Sbjct: 243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 6e-13
Identities = 57/290 (19%), Positives = 97/290 (33%), Gaps = 43/290 (14%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEA--WGVGKLRHKRLANLIGYCCDGD 143
V++G Q +AVK F+ D K + E + LRH+ + I
Sbjct: 24 VWRGSWQG-----ENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 144 ----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-- 197
+ L+ Y +L +L + T++ LR+ L IA L + E
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 198 -----DLNAYRVLFDENGDPRLSCFGL----MKNSRDGKSYSTNLA----YTPPEYLRNG 244
DL + +L +NG ++ GL +++ + Y PE L
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 245 RVTPESV------IFSFGTVLLDLLSGKH---IPPSHDMVVWNTVPIKFNFGALDMIRGK 295
I++FG VL ++ I + ++ VP +F DM +
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE--DMRKVV 250
Query: 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
+ + FS T + L C P R + TL +
Sbjct: 251 CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 6e-13
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 409 QEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV--GTMVSPTVYARRSLCHLMC 466
+ T + + RK G+ F+ ++ A+ Y+Q + + ++ R+ CHL
Sbjct: 19 RPATPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKL 78
Query: 467 DQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
+ D A +A +A A Y ++ AL KL A L+ SLE
Sbjct: 79 EDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 8e-13
Identities = 62/276 (22%), Positives = 102/276 (36%), Gaps = 36/276 (13%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V+ G +AVK K P F EA + +L+H+RL L +
Sbjct: 29 VWMGYYNGHTK----VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPI 82
Query: 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRV 204
++ EYM N +L L + L +A IAE + + H DL A +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANI 140
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGRVTPESVIFSFGTVL 259
L + +++ FGL + D + + A +T PE + G T +S ++SFG +L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 260 LDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF 318
++++ IP P N + + + D N E ++
Sbjct: 201 TEIVTHGRIPYPGMT-----------NPEVIQNLERGYRMVRPD-----NCPEE----LY 240
Query: 319 DLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSY 354
L C + P +RP L S L + Y
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLEDFFTATE-GQY 275
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 9e-13
Identities = 50/282 (17%), Positives = 106/282 (37%), Gaps = 34/282 (12%)
Query: 85 VVYKGRLQDGNDNRRW-IAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG + + +A+K+ + P K+ DEA+ + + + + L+G C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
L+ + MP L ++ I L + IA+ ++Y L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSF 255
VL +++ FGL K + + + E + + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 256 GTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEAT 315
G + +L++ P ++ +P ++ L + +
Sbjct: 206 GVTVWELMTFGSKP-------YDGIP---ASEISSILEKGERLPQPPI------CTID-- 247
Query: 316 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVML 357
V+ + +C + RP ++L+ + + P Y+++
Sbjct: 248 -VYMIMRKCWMIDADSRPKFRELIIEFSKMARDP--QRYLVI 286
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 9e-13
Identities = 55/286 (19%), Positives = 106/286 (37%), Gaps = 42/286 (14%)
Query: 86 VYKGRLQDGNDNRRWIAVK--KFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V +G L+ + +AVK K + + ++F EA + H + L+G C +
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 144 -----ERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
+ +++ +M L + I L+ + IA ++Y S+ R
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN--RN 167
Query: 195 LYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLRNGRVT 247
H DL A + ++ ++ FGL K G Y + E L + T
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT 227
Query: 248 PESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306
+S +++FG + ++ + P P N D + + L +
Sbjct: 228 SKSDVWAFGVTMWEIATRGMTPYPGVQ-----------NHEMYDYLLHGHRLKQPE---- 272
Query: 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP-LQNRPDV 351
+ E ++++ C + +P +RP L L L++ PDV
Sbjct: 273 -DCLDE----LYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDV 313
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 65/311 (20%), Positives = 108/311 (34%), Gaps = 60/311 (19%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VY+G++ ++ + AVK + D F EA + K H+ + IG
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 143 DERLLVAEYMPNDTLAKHL-----FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
R ++ E M L L + ++ L VA IA Y H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE--NHFIH 204
Query: 198 -DLNAYRVLFDENGDPRLSC---FGLMKNSRDGKSYSTNLAY-------------TPPEY 240
D+ A L G R++ FG+ +RD Y Y PPE
Sbjct: 205 RDIAARNCLLTCPGPGRVAKIGDFGM---ARD--IYRAG--YYRKGGCAMLPVKWMPPEA 257
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILH 299
G T ++ +SFG +L ++ S ++P PS N L+ + +
Sbjct: 258 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----------NQEVLEFVTSGGRMD 306
Query: 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGI 359
N V+ + ++C Q++P +RPN ++ + PDV +
Sbjct: 307 PPK-----NCPGP----VYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV-----INT 352
Query: 360 PRHEEAPPTPQ 370
E P +
Sbjct: 353 ALPIEYGPLVE 363
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-12
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
EAR G F + ++ AV Y++ I Y+ R+ A+ D +A
Sbjct: 6 EARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKA 64
Query: 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
P++ A+ +A A + + A + L A + +
Sbjct: 65 IEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 102
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-12
Identities = 61/307 (19%), Positives = 111/307 (36%), Gaps = 46/307 (14%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VY+G + + A+K + A + +F +EA + + + L+G G
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 143 DERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLR----VALYIAEALDYCSSEGRP 194
L++ E M L N + L +A IA+ + Y ++
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA--NK 158
Query: 195 LYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLRNGRVT 247
H DL A + E+ ++ FG+ ++ + Y + PE L++G T
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 248 PESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306
S ++SFG VL ++ + P N L + +L D
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLS-----------NEQVLRFVMEGGLLDKPD---- 263
Query: 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEE-A 365
N +F+L C QY P+ RP+ +++S++ P + + EE
Sbjct: 264 -NCPDM----LFELMRMCWQYNPKMRPSFLEIISSIKEEME----PGFREVSFYYSEENK 314
Query: 366 PPTPQHP 372
P P+
Sbjct: 315 LPEPEEL 321
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 3e-12
Identities = 51/300 (17%), Positives = 107/300 (35%), Gaps = 34/300 (11%)
Query: 85 VVYKGRLQDGNDNRRW-IAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG + + +A+K+ + P K+ DEA+ + + + + L+G C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
L+ + MP L ++ I L + IA+ ++Y L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSF 255
VL +++ FGL K + + + E + + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 256 GTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEAT 315
G + +L++ P ++ +P ++ L + +
Sbjct: 206 GVTVWELMTFGSKP-------YDGIP---ASEISSILEKGERLPQPPI------CTID-- 247
Query: 316 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSP 375
V+ + +C + RP ++L+ + + P Y+++ P
Sbjct: 248 -VYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ--RYLVIQGDERMHLPSPTDSNFYR 304
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-12
Identities = 65/314 (20%), Positives = 107/314 (34%), Gaps = 52/314 (16%)
Query: 86 VYKGRLQDGNDNRR-WIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V R DN +AVK+ +H+ PD + F E + L + G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG 97
Query: 144 ER--LLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
+ LV EY+P+ D L +H ++ + L + I + ++Y S R H
Sbjct: 98 RQSLRLVMEYLPSGCLRDFLQRH-----RARLDASRLLLYSSQICKGMEYLGS--RRCVH 150
Query: 198 -DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY------------TPPEYLRNG 244
DL A +L + +++ FGL K K Y Y PE L +
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDY-----YVVREPGQSPIFWYAPESLSDN 205
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIP----PSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300
+ +S ++SFG VL +L + ++ + L+++ L
Sbjct: 206 IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA 265
Query: 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 360
+E V +L C P++RP+ L L L +
Sbjct: 266 PP-----ACPAE----VHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR-GCET----H 311
Query: 361 RHEEAPPTPQHPLS 374
P H LS
Sbjct: 312 AFTAHPEGKHHSLS 325
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 3e-12
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPT---VYARRSLCHLMCDQPDAALRDA 476
+ G+ + + F+ AV Y + I+ ++P + R+ + A++D
Sbjct: 14 RLKTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDC 69
Query: 477 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
+A C+ P +S A+ +AL+ L+ H +A K+A L+
Sbjct: 70 ERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELD 110
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 4e-12
Identities = 59/278 (21%), Positives = 102/278 (36%), Gaps = 38/278 (13%)
Query: 86 VYKGRLQDGNDNRR-WIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V R DN +AVK + E + L H+ + G C +
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 144 ER--LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
L+ E++P+ +L ++L +N+ I +L+ A+ I + +DY S R H DL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGS--RQYVHRDLA 153
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY------------TPPEYLRNGRVTP 248
A VL + ++ FGL K K Y Y PE L +
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEY-----YTVKDDRDSPVFWYAPECLMQSKFYI 208
Query: 249 ESVIFSFGTVLLDLLS----GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304
S ++SFG L +LL+ ++ T ++ ++ L
Sbjct: 209 ASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPP-- 266
Query: 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
N E V+ L +C +++P R + ++L+
Sbjct: 267 ---NCPDE----VYQLMRKCWEFQPSNRTSFQNLIEGF 297
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 9e-12
Identities = 52/268 (19%), Positives = 95/268 (35%), Gaps = 35/268 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V +G + +A+K + D ++ EA + +L + + LIG C +
Sbjct: 351 SVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAE 408
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
+LV E L K L + + I + + ++ + Y + H +L A
Sbjct: 409 ALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAAR 465
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSF 255
VL ++S FGL K SY T L + PE + + + S ++S+
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 525
Query: 256 GTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEA 314
G + + LS G+ P M + I + E
Sbjct: 526 GVTMWEALSYGQ--KPYKKMK---------GPEVMAFIEQGKRMECPP-----ECPPE-- 567
Query: 315 TVVFDLASRCLQYEPRERPNTKDLVSTL 342
++ L S C Y+ +RP+ + +
Sbjct: 568 --LYALMSDCWIYKWEDRPDFLTVEQRM 593
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 56/270 (20%), Positives = 100/270 (37%), Gaps = 39/270 (14%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYCCD 141
V KG Q + +AVK K+ DP EA + +L + + +IG C+
Sbjct: 32 TVKKGYYQMKKVVKT-VAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICE 88
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
+ +LV E L K+L +N+ ++ + + ++ + Y H DL
Sbjct: 89 AESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLA 144
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIF 253
A VL ++S FGL K R ++Y + + PE + + + +S ++
Sbjct: 145 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
Query: 254 SFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSE 312
SFG ++ + S G+ P M M+ + E
Sbjct: 205 SFGVLMWEAFSYGQ--KPYRGMK---------GSEVTAMLEKGERMGCPA-----GCPRE 248
Query: 313 EATVVFDLASRCLQYEPRERPNTKDLVSTL 342
++DL + C Y+ RP + L
Sbjct: 249 ----MYDLMNLCWTYDVENRPGFAAVELRL 274
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 64/298 (21%), Positives = 104/298 (34%), Gaps = 63/298 (21%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V+ + + + AVK + + + F EA + L+H+ + G C +G
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116
Query: 144 ERLLVAEYMPNDTLAKHL-------------FHWENQTIEWAMRLRVALYIAEALDYCSS 190
L+V EYM + L + L + L VA +A + Y +
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176
Query: 191 EGRPLYH-DLNAYRVLFDEN-----GDPRLSCFGLMKNSRDGKSYSTNLA------YTPP 238
H DL L + GD FG+ ++ Y + PP
Sbjct: 177 LH--FVHRDLATRNCLVGQGLVVKIGD-----FGMSRDIYSTDYYRVGGRTMLPIRWMPP 229
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPP----SHDMVVWNTVPIKFNFGALDMIR 293
E + + T ES ++SFG VL ++ + GK P S+ +D I
Sbjct: 230 ESILYRKFTTESDVWSFGVVLWEIFTYGKQ--PWYQLSNTEA-------------IDCIT 274
Query: 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 351
L E V+ + C Q EP++R + KD+ + L L P V
Sbjct: 275 QGRELERPR-----ACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 323
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 53/268 (19%), Positives = 95/268 (35%), Gaps = 35/268 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V +G + +A+K + D ++ EA + +L + + LIG C +
Sbjct: 25 SVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAE 82
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAY 202
+LV E L K L + + I + + ++ + Y + H DL A
Sbjct: 83 ALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAAR 139
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSF 255
VL ++S FGL K SY T L + PE + + + S ++S+
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 199
Query: 256 GTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEA 314
G + + LS G+ P M + I + E
Sbjct: 200 GVTMWEALSYGQ--KPYKKMK---------GPEVMAFIEQGKRMECPP-----ECPPE-- 241
Query: 315 TVVFDLASRCLQYEPRERPNTKDLVSTL 342
++ L S C Y+ +RP+ + +
Sbjct: 242 --LYALMSDCWIYKWEDRPDFLTVEQRM 267
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 63.9 bits (155), Expect = 4e-11
Identities = 35/236 (14%), Positives = 65/236 (27%), Gaps = 57/236 (24%)
Query: 144 ERLLVAEYMPND--TLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-D 198
R + M ++ T + L ++++ RL++ L + L G L H
Sbjct: 174 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTY 231
Query: 199 L---NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYL-----------RNG 244
L + ++ D+ G L+ F + S + + PPE R
Sbjct: 232 LRPVD---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRT 288
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304
+T ++ G V+ + P L +
Sbjct: 289 LMTFSFDAWALGLVIYWIWCAD--LP---------------IT------KDAALGGSEWI 325
Query: 305 LEG--NFSSEEATVVFDLASRCLQYEPRERPNTKDLVST----LAPLQNRPDVPSY 354
N V L L+Y +R + T + +P Y
Sbjct: 326 FRSCKNIPQP----VRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLY 377
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 44/265 (16%), Positives = 90/265 (33%), Gaps = 38/265 (14%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VYKG + +A + + ++F +EA + L+H +
Sbjct: 42 VYKGL---DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV 98
Query: 144 ER----LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-D 198
+ +LV E M + TL +L + ++ + I + L + + P+ H D
Sbjct: 99 KGKKCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRD 156
Query: 199 LNAYRVLFD-ENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVIF 253
L + G ++ GL R + + + TP PE ++
Sbjct: 157 LKCDNIFITGPTGSVKIGDLGLATLKRASFAKA--VIGTPEFMAPEMYEEK-YDESVDVY 213
Query: 254 SFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE 313
+FG +L++ + + P + N + + + + E
Sbjct: 214 AFGMCMLEMATSE--YPYSECQ---------NAAQIYRRVTSGV---KPASFDKVAIPE- 258
Query: 314 ATVVFDLASRCLQYEPRERPNTKDL 338
V ++ C++ ER + KDL
Sbjct: 259 ---VKEIIEGCIRQNKDERYSIKDL 280
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 4e-11
Identities = 60/288 (20%), Positives = 101/288 (35%), Gaps = 46/288 (15%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V+ + + + + AVK K F EA + L+H+ + G C DGD
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 144 ERLLVAEYMPN--------------DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS 189
++V EYM + L + + L +A IA + Y +
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA 150
Query: 190 SEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLR 242
S + H DL L N ++ FG+ ++ Y + PPE +
Sbjct: 151 S--QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM 208
Query: 243 NGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301
+ T ES ++SFG +L ++ + P N ++ I +L
Sbjct: 209 YRKFTTESDVWSFGVILWEIFTYGKQPWFQLS-----------NTEVIECITQGRVLERP 257
Query: 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349
E V+D+ C Q EP++R N K++ L L
Sbjct: 258 R-----VCPKE----VYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 5e-11
Identities = 58/273 (21%), Positives = 94/273 (34%), Gaps = 41/273 (15%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYCCD 141
VV +G + +AVK P+ F E + L H+ L L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
+V E P +L L R A+ +AE + Y S+ H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148
Query: 201 AYRVLFDENGDPRLSCFGLMKN-SRDGKSYSTN------LAYTPPEYLRNGRVTPESVIF 253
A +L ++ FGLM+ ++ Y A+ PE L+ + S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 254 SFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH---LEGNFS 310
FG L ++ + P W + G ILH +D L
Sbjct: 209 MFGVTLWEMFTYGQEP-------W------------IGLNGSQILHKIDKEGERLP---R 246
Query: 311 SEEAT-VVFDLASRCLQYEPRERPNTKDLVSTL 342
E+ ++++ +C ++P +RP L L
Sbjct: 247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 62.8 bits (152), Expect = 8e-11
Identities = 42/342 (12%), Positives = 81/342 (23%), Gaps = 86/342 (25%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKH---AWPDPKQFADEAWGVGKLRHKRLANLIGYCC- 140
+ D + V KQ +E + LR +
Sbjct: 93 AYLEAT--DQETGESF-EVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLR 149
Query: 141 --------------------DGDERLLVAEY---MPND-----TLAKHLFHW--ENQTIE 170
+ + V P T + L ++++
Sbjct: 150 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLV 209
Query: 171 WAMRLRVALYIAEALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSCFGLMKNSRDG 226
RL++ L + L G L H L + ++ D+ G L+ F +
Sbjct: 210 HHARLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGAS 264
Query: 227 KSYSTNLAYTPPEYL----------RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVV 276
+ PPE +T ++ G + + P
Sbjct: 265 AVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LP------ 316
Query: 277 WNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS-SEEATVVFDLASRCLQYEPRERPNT 335
L + + + L L+Y +R
Sbjct: 317 -------N--------TDDAALGGSEWIFRSCKNIPQPVR---ALLEGFLRYPKEDRLLP 358
Query: 336 KDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPMG 377
+ T Q R ++ + + L + PT + P G
Sbjct: 359 LQAMETPEYEQLRTELSAALPLYQT---DGEPTREGGAPPSG 397
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 59.7 bits (144), Expect = 7e-10
Identities = 38/301 (12%), Positives = 67/301 (22%), Gaps = 68/301 (22%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYC-- 139
VV+ R + A+K FT A ++ + + +L +
Sbjct: 77 VVFLVRDVE---RLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRL 133
Query: 140 ------------------------CDGDERLLVAEYMPND--TLAKHLFHW--ENQTIEW 171
LL+ D L L
Sbjct: 134 LLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGI 193
Query: 172 AMRLRVALYIAEALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSCFGL-MKNSRDG 226
+ + S+G L H N + +G L K G
Sbjct: 194 LALHILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRG 248
Query: 227 KSYSTNLAYTPPEYL--RNGRVTPESVIFSFGTVLLDLLSGK----HIPPSHDMVVWNTV 280
+ S + Y P E+L T + G + + + P
Sbjct: 249 PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPS 308
Query: 281 PIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVS 340
+L + + L R L ++ R R + +
Sbjct: 309 LRVPGTDSLAFGSCTPL-------------PDFVK---TLIGRFLNFDRRRRLLPLEAME 352
Query: 341 T 341
T
Sbjct: 353 T 353
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQ 478
E + + + F+ K+++ A+ YSQ I++ + Y RSL +L + AL DA +
Sbjct: 7 EELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATR 65
Query: 479 AQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
A + + +Y +A + L + A + ++
Sbjct: 66 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 104
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 46/212 (21%), Positives = 74/212 (34%), Gaps = 42/212 (19%)
Query: 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVL 205
+ EY N TL + H EN + R+ I EAL Y S+G + H DL +
Sbjct: 92 IQMEYCENGTLYDLI-HSENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIF 148
Query: 206 FDENGDPRLSCFGLMKNSRDGKSYSTNLA------------------YTPPEYLRN-GRV 246
DE+ + ++ FGL KN + Y E L G
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 247 TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306
+ ++S G + +++ P S M V I L +R +I +
Sbjct: 209 NEKIDMYSLGIIFFEMIY----PFSTGM---ERVNI------LKKLRSVSIE--FPPDFD 253
Query: 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
N E + + ++P +RP + L
Sbjct: 254 DNKMKVEK----KIIRLLIDHDPNKRPGARTL 281
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 61/287 (21%), Positives = 102/287 (35%), Gaps = 47/287 (16%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG L + A+K A P ++F EA +L+H + L+G
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84
Query: 143 DERLLVAEYMPN--------------DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC 188
++ Y + D + +E + + IA ++Y
Sbjct: 85 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 144
Query: 189 SSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYL 241
SS + H DL VL + + ++S GL + Y + PE +
Sbjct: 145 SSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI 202
Query: 242 RNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300
G+ + +S I+S+G VL ++ S P + N ++MIR + +L
Sbjct: 203 MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----------NQDVVEMIRNRQVLPC 251
Query: 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347
D + + V+ L C P RP KD+ S L N
Sbjct: 252 PD-----DCPAW----VYALMIECWNEFPSRRPRFKDIHSRLRAWGN 289
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 67/299 (22%), Positives = 109/299 (36%), Gaps = 52/299 (17%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGD 143
V K R+ + R A+K+ ++A D + FA E + KL H + NL+G C
Sbjct: 41 VLKARI-KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 99
Query: 144 ERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEALDYCS 189
L EY P+ L L + T+ L A +A +DY S
Sbjct: 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 159
Query: 190 SEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA------YTPPEYLR 242
+ H DL A +L EN +++ FGL SR + Y + E L
Sbjct: 160 Q--KQFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLN 214
Query: 243 NGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301
T S ++S+G +L +++S P + + L
Sbjct: 215 YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----------CAELYEKLPQGYRLEKP 263
Query: 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 360
N E V+DL +C + +P ERP+ ++ +L + +YV +
Sbjct: 264 L-----NCDDE----VYDLMRQCWREKPYERPSFAQILVSLNRMLEER--KTYVNTTLY 311
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 57/309 (18%), Positives = 106/309 (34%), Gaps = 62/309 (20%)
Query: 86 VYKGRLQD--GNDNRRWI--AVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYC 139
V + + + AVK A D E + + +HK + NL+G C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 140 CDGDERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEAL 185
++ EY L ++L + + + + +A +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 186 DYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY--------- 235
+Y +S + H DL A VL EN +++ FGL +RD + + Y
Sbjct: 171 EYLAS--QKCIHRDLAARNVLVTENNVMKIADFGL---ARD--INNID-YYKKTTNGRLP 222
Query: 236 ---TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDM 291
PE L + T +S ++SFG ++ ++ + P P +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----------VEELFKL 271
Query: 292 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 351
++ + + N ++E ++ + C P +RP K LV L +
Sbjct: 272 LKEGHRMDKPA-----NCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Query: 352 PSYVMLGIP 360
Y+ L P
Sbjct: 323 EEYLDLSQP 331
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 57.5 bits (139), Expect = 5e-09
Identities = 46/277 (16%), Positives = 87/277 (31%), Gaps = 58/277 (20%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR----HKRLANLIGYCC 140
+VY+G + R +AVK+ + + E V LR H +
Sbjct: 40 IVYRGMFDN-----RDVAVKRILPECFSFADR---E---VQLLRESDEHPNVIRYFCTEK 88
Query: 141 DGDERLLVAEYMP---NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
D + + E + + + F ++ L + S + H
Sbjct: 89 DRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ-----QTTSGLAHLHSLN--IVH 141
Query: 198 -DLNAYRVLFDENGD-----PRLSCFGLMKNSRDGKSYSTNLA-------YTPPEYLR-- 242
DL + +L +S FGL K G+ + + + PE L
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 243 -NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301
T IFS G V ++S P ++ + N ++ ++ L
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPF------GKSLQRQANI----LLGACSLDCLH 251
Query: 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
A +L + + +P++RP+ K +
Sbjct: 252 PE----KHEDVIAR---ELIEKMIAMDPQKRPSAKHV 281
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 6e-09
Identities = 25/146 (17%), Positives = 48/146 (32%), Gaps = 24/146 (16%)
Query: 396 HYKDDEGTNELSFQEWTQQMRDM---------LEARKRGDVAFREKEFKTAVDCYSQFID 446
H+ G L FQ + + D + ++ G+ F++ E A+ Y + +D
Sbjct: 7 HHHHSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALD 66
Query: 447 VGTMVSP---------------TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 491
+ + C+ A+ A + + + A Y
Sbjct: 67 FFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALY 126
Query: 492 MQAVALAKLDMHKDAADMLKEAASLE 517
VA ++A + L +AASL
Sbjct: 127 KLGVANMYFGFLEEAKENLYKAASLN 152
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 9e-09
Identities = 38/208 (18%), Positives = 82/208 (39%), Gaps = 31/208 (14%)
Query: 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVL 205
+ E+ TL + + + ++ + L + I + +DY S+ L + DL +
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIF 154
Query: 206 FDENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYLRNGRVTPESVIFSFGTVLLDL 262
+ ++ FGL+ + ++ + + L Y PE + + E +++ G +L +L
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Query: 263 LSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 322
L + + K L D + F +E T++
Sbjct: 215 LHVC--DTAFET-------------------SKFFTDLRDGIISDIFDKKEKTLL----Q 249
Query: 323 RCLQYEPRERPNTKDLVSTLAPLQNRPD 350
+ L +P +RPNT +++ TL + P+
Sbjct: 250 KLLSKKPEDRPNTSEILRTLTVWKKSPE 277
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 9e-09
Identities = 15/105 (14%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALR 474
M + +++G+ F++ ++ AV CY Q I +P Y+ +++ + + A++
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQ 59
Query: 475 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519
Q + L++ + A ++ ++
Sbjct: 60 MCQQGLRYTSTAEHVAIRSKLQYR-LELAQGAVGSVQIPVVEVDE 103
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 9e-09
Identities = 16/106 (15%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQ 478
L+ ++ G+ A+++K+F TA+ Y + ++ + T ++ + + +
Sbjct: 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEK 63
Query: 479 A-------QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
A + Y + A+ + K + +KDA ++ +
Sbjct: 64 AIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH 109
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 409 QEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ 468
Q + +M R + AF ++ A+ + ++V + R+ C + +
Sbjct: 134 QSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGE 192
Query: 469 PDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 516
P A+ D A + D + AFY + +L H+ + ++E L
Sbjct: 193 PRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKL 240
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 1/98 (1%)
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
+ + G + A+ + +D + Y RR+ L + AAL D +
Sbjct: 28 KHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKV 86
Query: 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
+ D++ A + L K +A D K+
Sbjct: 87 IQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN 124
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 48/301 (15%), Positives = 88/301 (29%), Gaps = 74/301 (24%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYC------ 139
V +D + A+K+ H D ++ EA H N++
Sbjct: 45 VDLVE--GLHDGHFY-ALKRILCHEQQDREEAQREADMHRLFNHP---NILRLVAYCLRE 98
Query: 140 -CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMR------LRVALYIAEALDYCSSEG 192
E L+ + TL + + + L + L I L+ +
Sbjct: 99 RGAKHEAWLLLPFFKRGTLWNEI----ERLKDKGNFLTEDQILWLLLGICRGLEAIHA-- 152
Query: 193 RPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSR-------------DGKSYSTNLAYTPP 238
+ H DL +L + G P L G M + D + ++Y P
Sbjct: 153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP 212
Query: 239 EYL---RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295
E + + + ++S G VL ++ G+ P ++
Sbjct: 213 ELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG-P--------------YDMVFQKGDSVA 257
Query: 296 NILHLMDSHLEGNFS-------SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348
+ S S L + + +P +RP+ L+S L LQ
Sbjct: 258 LAVQ-------NQLSIPQSPRHSSALW---QLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307
Query: 349 P 349
Sbjct: 308 A 308
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 56/299 (18%), Positives = 98/299 (32%), Gaps = 75/299 (25%)
Query: 86 VYKGRLQD--GNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKL-----RHKRLANLIG 137
V + D +AVK A + + E K+ +H+ + NL+G
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSEL----KIMSHLGQHENIVNLLG 117
Query: 138 YCCDGDERLLVAEYMPN------------DTLAKHLFHWENQTIEWAMRLRVALYIAEAL 185
C G L++ EY F N T L + +A+ +
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGM 177
Query: 186 DYCSSEGRPLYH-DLNAYRVLFDEN-----GDPRLSCFGLMKNSRDGKSYSTNLAY---- 235
+ +S + H D+ A VL GD FGL +RD + + Y
Sbjct: 178 AFLAS--KNCIHRDVAARNVLLTNGHVAKIGD-----FGL---ARD--IMNDS-NYIVKG 224
Query: 236 --------TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNF 286
PE + + T +S ++S+G +L ++ S P P I N
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG----------ILVNS 274
Query: 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
+++ + F+ + ++ + C EP RP + + S L
Sbjct: 275 KFYKLVKDGYQMAQPA------FAPKN---IYSIMQACWALEPTHRPTFQQICSFLQEQ 324
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 49/234 (20%), Positives = 80/234 (34%), Gaps = 50/234 (21%)
Query: 126 KLRHKRLANLIGYC-----CDGDERLLVAEYMPNDTLAKHL--FHWENQTIEWAMRLRVA 178
+L+H N++ Y +V EY LA + E Q ++ LRV
Sbjct: 61 ELKHP---NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 179 LYIAEALDYCSSEGRPLYH----DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 234
+ AL C + DL V D + +L FGL + S++
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV 177
Query: 235 YTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALD 290
TP PE + +S I+S G +L +L + PP F
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PP-------------FT----- 217
Query: 291 MIRGKNILHLMDSHLEGNFS------SEEATVVFDLASRCLQYEPRERPNTKDL 338
+ L EG F S+E ++ +R L + RP+ +++
Sbjct: 218 ---AFSQKELAGKIREGKFRRIPYRYSDELN---EIITRMLNLKDYHRPSVEEI 265
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 40/221 (18%), Positives = 79/221 (35%), Gaps = 33/221 (14%)
Query: 126 KLRHKRLANLIGY---CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIA 182
++H N++ Y + +V +Y L K + + + L + I
Sbjct: 79 NMKHP---NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 183 EALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----P 238
AL + + L+ D+ + + ++G +L FG+ + + TP P
Sbjct: 136 LALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR-GKNI 297
E N +S I++ G VL +L + K F A M I
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLK--HA---------------FEAGSMKNLVLKI 237
Query: 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+ + ++S + + L S+ + PR+RP+ +
Sbjct: 238 ISGSFPPVSLHYSYD----LRSLVSQLFKRNPRDRPSVNSI 274
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 3e-08
Identities = 30/217 (13%), Positives = 60/217 (27%), Gaps = 27/217 (12%)
Query: 85 VVYKGRLQDGND--NRRWIAVKKFTKHAWPDPKQF---ADEAWGVGKLRHKRLANLIGYC 139
VY+ D ND N++ +K +P +F +
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEG---- 192
+ +LV E TL + ++N + + V + ++
Sbjct: 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHG 196
Query: 193 --RP----LYHDLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTN---LAYTPPEY 240
+P L + D + L G MK G ++ + E
Sbjct: 197 DIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEM 256
Query: 241 LRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVW 277
L N + F + +L G ++ ++
Sbjct: 257 LSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC 293
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 41/197 (20%), Positives = 74/197 (37%), Gaps = 22/197 (11%)
Query: 85 VVYKGRLQDGNDNR--RWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYC 139
VY D +A+K K+F E +L H+ + ++I
Sbjct: 26 TVYLAE-----DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD 80
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-D 198
+ D LV EY+ TL++++ + + + I + + + + H D
Sbjct: 81 EEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMR--IVHRD 136
Query: 199 LNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL-----AYTPPEYLRNGRVTPESVIF 253
+ +L D N ++ FG+ K + TN Y PE + + I+
Sbjct: 137 IKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIY 196
Query: 254 SFGTVLLDLLSGKHIPP 270
S G VL ++L G+ PP
Sbjct: 197 SIGIVLYEMLVGE--PP 211
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 5e-08
Identities = 30/174 (17%), Positives = 58/174 (33%), Gaps = 40/174 (22%)
Query: 176 RVALYIAE---ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK--------NSR 224
+V Y+ + AL + S+G ++ D+ + G +L FGL+ +
Sbjct: 158 QVWGYLRDTLLALAHLHSQGL-VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ 216
Query: 225 DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKF 284
+G Y PE L+ + +FS G +L++ +P
Sbjct: 217 EGDPR-----YMAPELLQGSY-GTAADVFSLGLTILEVACNMELP--------------H 256
Query: 285 NFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+R + + L S E + L+ +P+ R + L
Sbjct: 257 GGEGWQQLRQGYLPPEFTAGL-----SSELR---SVLVMMLEPDPKLRATAEAL 302
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 6e-08
Identities = 40/235 (17%), Positives = 68/235 (28%), Gaps = 55/235 (23%)
Query: 138 YCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
C G + E++ L + L++ A+ + + P+ H
Sbjct: 114 ELCKGQ----LVEFLKKMESRGPL--SCDTV------LKIFYQTCRAVQHMHRQKPPIIH 161
Query: 198 -DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN----------------LAYTPPE- 239
DL +L G +L FG YS + Y PE
Sbjct: 162 RDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEI 221
Query: 240 --YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297
N + + I++ G +L L +H P F
Sbjct: 222 IDLYSNFPIGEKQDIWALGCILYLLCFRQH-P--------------FE--------DGAK 258
Query: 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVP 352
L +++ + TV L LQ P ER + ++V L + +V
Sbjct: 259 LRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 8e-08
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 423 KRGDVAFREKEFKTAVDCYSQFIDVGTMVSP--TVYARRSLCHLMCDQPDAALRDAMQAQ 480
+G+ FR K++ A+ Y+ +++ Y+ S C++ + + +A
Sbjct: 11 DKGNQFFRNKKYDDAIKYYNWALEL----KEDPVFYSNLSACYVSVGDLKKVVEMSTKAL 66
Query: 481 CVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 518
+ PD+S +A A L DA L + +
Sbjct: 67 ELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGD 104
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 12/97 (12%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Query: 423 KRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV 482
+ + + + + + + + + +VY R + + D A +D +A+ +
Sbjct: 275 YMALIMADRNDSTEYYNYFDKALKLDSN-NSSVYYHRGQMNFILQNYDQAGKDFDKAKEL 333
Query: 483 YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519
P+ + A + + D + EA +
Sbjct: 334 DPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPE 370
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 5e-04
Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Query: 424 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY 483
G F + + A + + I++ Y +L + +A +
Sbjct: 243 TGIFKFLKNDPLGAHEDIKKAIELFP--RVNSYIYMALIMADRNDSTEYYNYFDKALKLD 300
Query: 484 PDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 516
+ S+ +Y + L + A +A L
Sbjct: 301 SNNSSVYYHRGQMNFILQNYDQAGKDFDKAKEL 333
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 8e-08
Identities = 60/301 (19%), Positives = 103/301 (34%), Gaps = 77/301 (25%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V K + AVK ++A P + + E + ++ H + L G C
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 143 DERLLVAEYMPNDTLAKHL----------------------FHWENQTIEWAMRLRVALY 180
LL+ EY +L L H + + + + A
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDEN-----GDPRLSCFGLMKNSRDGKSYSTNLA 234
I++ + Y + L H DL A +L E D FGL SRD Y + +
Sbjct: 159 ISQGMQYLAE--MKLVHRDLAARNILVAEGRKMKISD-----FGL---SRD--VYEED-S 205
Query: 235 Y------------TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVP 281
Y E L + T +S ++SFG +L ++++ P P
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-------- 257
Query: 282 IKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341
++++ + + D N S E ++ L +C + EP +RP D+
Sbjct: 258 ---PERLFNLLKTGHRMERPD-----NCSEE----MYRLMLQCWKQEPDKRPVFADISKD 305
Query: 342 L 342
L
Sbjct: 306 L 306
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 8e-08
Identities = 54/223 (24%), Positives = 84/223 (37%), Gaps = 46/223 (20%)
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALYIAE 183
LRH + L GY D L+ EY P T+ + L + R A YI E
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--------LSKFDEQRTATYITE 117
Query: 184 ---ALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--NLAYTP 237
AL YC S+ + H D+ +L G+ +++ FG ++ + L Y P
Sbjct: 118 LANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 175
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297
PE + + ++S G + + L GK PP T K I
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQETY--------------KRI 219
Query: 298 LHL---MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKD 337
+ + +E A DL SR L++ P +RP ++
Sbjct: 220 SRVEFTFPDFV-----TEGAR---DLISRLLKHNPSQRPMLRE 254
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 8e-08
Identities = 20/136 (14%), Positives = 53/136 (38%), Gaps = 17/136 (12%)
Query: 396 HYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQ---FIDVGTMVS 452
++ + + E++ +E ++ ++RG V F+E ++K A+ Y + +++ + S
Sbjct: 128 SFEKAKESWEMNSEE---KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFS 184
Query: 453 P-----------TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLD 501
+ ++CHL AA+ +A + + + A ++
Sbjct: 185 NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVN 244
Query: 502 MHKDAADMLKEAASLE 517
+ A ++ L
Sbjct: 245 DFELARADFQKVLQLY 260
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 9e-08
Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 17/115 (14%)
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP-----------------TVYARRSLC 462
R++G+ F +K++K A+D Y + + +YA S C
Sbjct: 13 ALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQC 72
Query: 463 HLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
+L A + + A + +A A +A + LK
Sbjct: 73 YLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 9e-08
Identities = 56/294 (19%), Positives = 101/294 (34%), Gaps = 61/294 (20%)
Query: 86 VYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCD 141
V + +D +AVK A + + E + L H + NL+G C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 142 GDERLLVAEYMPNDTLAKHL----------------FHWENQTIEWAMRLRVALYIAEAL 185
G L++ EY L L + ++ L + +A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 186 DYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY--------- 235
+ +S+ H DL A +L ++ FGL +RD + + Y
Sbjct: 159 AFLASKN--CIHRDLAARNILLTHGRITKICDFGL---ARD--IKNDS-NYVVKGNARLP 210
Query: 236 ---TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDM 291
PE + N T ES ++S+G L +L S P P + + M
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG----------MPVDSKFYKM 260
Query: 292 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
I+ + + + +E ++D+ C +P +RP K +V +
Sbjct: 261 IKEGFRMLSPE-----HAPAE----MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-07
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 11/117 (9%)
Query: 412 TQQMRDMLEARK-RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPD 470
+ M D A K G+ A+++K+F+ A Y + I++ + T Y ++ + +
Sbjct: 1 SNAMTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFA 59
Query: 471 AALRDAMQA-------QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520
++ +A + Y + A A K + A + L E R
Sbjct: 60 ECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRS--LSEFR 114
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 49/233 (21%), Positives = 85/233 (36%), Gaps = 33/233 (14%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALYIA 182
++++ G + DE ++ EYM ND++ K ++ + + + I
Sbjct: 99 DIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK 158
Query: 183 E---ALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--NL 233
+ Y +E + + H D+ N +L D+NG +LS FG + D K +
Sbjct: 159 SVLNSFSYIHNE-KNICHRDVKPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTY 214
Query: 234 AYTPPEYLRNGRVT--PESVIFSFGTVLLDLLSGKHIPP-SHDMVVWNT------VPIKF 284
+ PPE+ N + I+S G L + P S + + I++
Sbjct: 215 EFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV--VPFSLKISLVELFNNIRTKNIEY 272
Query: 285 NFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKD 337
D L S NF S E D L+ P ER ++D
Sbjct: 273 PL---DRNHFLYPLTNKKSTCSNNFLSNEDI---DFLKLFLRKNPAERITSED 319
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 57/290 (19%), Positives = 87/290 (30%), Gaps = 65/290 (22%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWG-VGKLR----HKRLANLIGYC 139
VV++G Q R +AVK+ F D A + L H +
Sbjct: 31 VVFQGSFQG-----RPVAVKRM-------LIDFCDIALMEIKLLTESDDHPNVIRYYCSE 78
Query: 140 CDGDERLLVAEYMP---NDTLAKHLFHWENQTIEWAMRLRVALY-IAEALDYCSSEG--- 192
+ E D + EN ++ L IA + + S
Sbjct: 79 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIH 138
Query: 193 RPL---------YHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA--------Y 235
R L A + EN +S FGL K G+S +
Sbjct: 139 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGW 198
Query: 236 TPPEYLRNG-------RVTPESVIFSFGTVLLDLLSGKHIPPSHD-MVVWNTVPIKFNFG 287
PE L R+T IFS G V +LS P N + F+
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD 258
Query: 288 ALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKD 337
+ + +++ EAT DL S+ + ++P +RP
Sbjct: 259 EMKCLHDRSL-------------IAEAT---DLISQMIDHDPLKRPTAMK 292
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 51/265 (19%), Positives = 97/265 (36%), Gaps = 36/265 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
+VY GR N+ IA+K+ + + +E L+HK + +G +
Sbjct: 37 IVYAGR---DLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGF 93
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY---IAEALDYCSSEGRPLYH-DLN 200
+ E +P +L+ L + ++ + + Y I E L Y + H D+
Sbjct: 94 IKIFMEQVPGGSLSA-LLRSKWGPLKDNEQT-IGFYTKQILEGLKYLHDNQ--IVHRDIK 149
Query: 201 AYRVLFD-ENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRV--TPESVIF 253
VL + +G ++S FG K + T PE + G + I+
Sbjct: 150 GDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW 209
Query: 254 SFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE 313
S G ++++ +GK PP +++ F G + + + S+E
Sbjct: 210 SLGCTIIEMATGK--PPFYELG--EPQAAMFKVGMFKVHP----------EIPESMSAE- 254
Query: 314 ATVVFDLASRCLQYEPRERPNTKDL 338
+C + +P +R DL
Sbjct: 255 ---AKAFILKCFEPDPDKRACANDL 276
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 43/213 (20%), Positives = 71/213 (33%), Gaps = 54/213 (25%)
Query: 150 EYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGRPLYH-DL---NAYRV 204
+ + L + + E + L + + IAEA+++ S+G L H DL N +
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG--LMHRDLKPSN---I 195
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTNLA----------------YTPPEYLRNGRVTP 248
F + ++ FGL+ + T L Y PE + +
Sbjct: 196 FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSH 255
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308
+ IFS G +L +LL F M R + I + +
Sbjct: 256 KVDIFSLGLILFELLYS--------------------FST-QMERVRIITDVRNLKFPLL 294
Query: 309 F---SSEEATVVFDLASRCLQYEPRERPNTKDL 338
F +E +V L P ERP D+
Sbjct: 295 FTQKYPQEHMMV----QDMLSPSPTERPEATDI 323
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 53/291 (18%), Positives = 100/291 (34%), Gaps = 44/291 (15%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD---EAWGVGKLRHKRLANLIGY---C 139
VY+ D A+KK D K AD E + +L H N+I Y
Sbjct: 48 VYRAA--CLLDGVPV-ALKKVQIFDLMDAKARADCIKEIDLLKQLNH---PNVIKYYASF 101
Query: 140 CDGDERLLVAEYMPNDTLAKHL--FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
+ +E +V E L++ + F + + I + + + AL++ S + H
Sbjct: 102 IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMH 159
Query: 198 -DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPESVI 252
D+ V G +L GL + + + +L TP PE + +S I
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDI 219
Query: 253 FSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSE 312
+S G +L ++ + + P + L + K ++S E
Sbjct: 220 WSLGCLLYEMAALQS-------------PFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE 266
Query: 313 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHE 363
+ L + C+ +P +RP+ + + + + H
Sbjct: 267 ----LRQLVNMCINPDPEKRPDVTYV------YDVAKRMHACTASSLEHHH 307
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 59/309 (19%), Positives = 102/309 (33%), Gaps = 66/309 (21%)
Query: 86 VYKGRLQD--GNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYCCD 141
V +AVK + A + + E + +L H+ + NL+G C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 142 GDERLLVAEYMPNDTLAKHL-----------FHWENQTIEWAMR----------LRVALY 180
L+ EY L +L +ENQ L A
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY---- 235
+A+ +++ + H DL A VL ++ FGL +RD S + Y
Sbjct: 181 VAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGL---ARD--IMSDS-NYVVRG 232
Query: 236 --------TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNF 286
PE L G T +S ++S+G +L ++ S P P I +
Sbjct: 233 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG----------IPVDA 282
Query: 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346
+I+ + + E ++ + C ++ R+RP+ +L S L
Sbjct: 283 NFYKLIQNGFKMDQPF-----YATEE----IYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 333
Query: 347 NRPDVPSYV 355
+ Y
Sbjct: 334 ADAEEAMYQ 342
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 55/293 (18%), Positives = 101/293 (34%), Gaps = 60/293 (20%)
Query: 86 VYKGRLQ--DGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYCCD 141
V + D R +AVK + A + + E + + H + NL+G C
Sbjct: 43 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102
Query: 142 GDE-RLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEALD 186
+++ E+ L+ +L + + + +A+ ++
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 187 YCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY---------- 235
+ +S R H DL A +L E ++ FGL +RD Y Y
Sbjct: 163 FLAS--RKCIHRDLAARNILLSEKNVVKICDFGL---ARD--IYKDP-DYVRKGDARLPL 214
Query: 236 --TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDMI 292
PE + + T +S ++SFG +L ++ S P P +K + +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG----------VKIDEEFCRRL 264
Query: 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
+ + D + E ++ C EP +RP +LV L L
Sbjct: 265 KEGTRMRAPD-----YTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 55/299 (18%), Positives = 101/299 (33%), Gaps = 72/299 (24%)
Query: 86 VYKGRLQDGNDNRRW----IAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYC 139
V + ++ +AVK A D E + + +HK + NL+G C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 140 CDGDERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEAL 185
++ EY L ++L + + + + +A +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 186 DYCSSEGRPLYH-DLNAYRVLFDEN-----GDPRLSCFGLMKNSRDGKSYSTNLAY---- 235
+Y +S + H DL A VL EN D FGL +RD + + Y
Sbjct: 217 EYLAS--QKCIHRDLAARNVLVTENNVMKIAD-----FGL---ARD--INNID-YYKKTT 263
Query: 236 --------TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNF 286
PE L + T +S ++SFG ++ ++ + P P
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----------VE 312
Query: 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
+++ + + N ++E ++ + C P +RP K LV L +
Sbjct: 313 ELFKLLKEGHRMDKPA-----NCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 66/309 (21%), Positives = 103/309 (33%), Gaps = 77/309 (24%)
Query: 86 VYKGRLQDGNDNRRWI--AVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V++ R + AVK + A F EA + + + + L+G C G
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122
Query: 143 DERLLVAEYMPNDTLAKHL----------------------FHWENQTIEWAMRLRVALY 180
L+ EYM L + L + A +L +A
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDEN-----GDPRLSCFGLMKNSRDGKSYSTNLA 234
+A + Y S R H DL L EN D FGL SR+ YS +
Sbjct: 183 VAAGMAYLSE--RKFVHRDLATRNCLVGENMVVKIAD-----FGL---SRN--IYSAD-Y 229
Query: 235 Y------------TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVP 281
Y PPE + R T ES ++++G VL ++ S P
Sbjct: 230 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA-------- 281
Query: 282 IKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341
+ + +R NIL + N E +++L C P +RP+ +
Sbjct: 282 ---HEEVIYYVRDGNILACPE-----NCPLE----LYNLMRLCWSKLPADRPSFCSIHRI 329
Query: 342 LAPLQNRPD 350
L + R +
Sbjct: 330 LQRMCERAE 338
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 54/288 (18%), Positives = 95/288 (32%), Gaps = 64/288 (22%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFA-DEAWGVGKLRHKRLANLIGY--CCD 141
VV++ + + D+ + A+K+ ++ E + KL H ++ Y
Sbjct: 20 VVFEAK--NKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHP---GIVRYFNAWL 73
Query: 142 GDERL-------------LVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDY 187
+ + + L + E ++ L + L IAEA+++
Sbjct: 74 EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEF 133
Query: 188 CSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTNLA--------- 234
S+G L H DL + F + ++ FGL M + ++ T +
Sbjct: 134 LHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV 191
Query: 235 ----YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALD 290
Y PE + + + IFS G +L +LL P S M T L
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVRT---------LT 238
Query: 291 MIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+R L E +V L P ERP ++
Sbjct: 239 DVRNLKF-----PPLFTQKYPCEYVMV----QDMLSPSPMERPEAINI 277
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 2e-07
Identities = 43/220 (19%), Positives = 74/220 (33%), Gaps = 50/220 (22%)
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALYIAE 183
LRH + + Y D L+ E+ P L K L R R A ++ E
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK--------HGRFDEQRSATFMEE 122
Query: 184 ---ALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--NLAYTP 237
AL YC + H D+ +L G+ +++ FG ++ + + L Y P
Sbjct: 123 LADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLP 180
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297
PE + + ++ G + + L G PP +
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGM--PPFDS---------------------PSH 217
Query: 298 LHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRER 332
+ + S+ + DL S+ L+Y P +R
Sbjct: 218 TETHRRIVNVDLKFPPFLSDGSK---DLISKLLRYHPPQR 254
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 57/299 (19%), Positives = 104/299 (34%), Gaps = 62/299 (20%)
Query: 86 VYKGRL----QDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYC 139
V +D + +AVK A D E + + +HK + NL+G C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 140 CDGDERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEAL 185
++ EY L ++L H + + + A +A +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 186 DYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAY--------- 235
+Y +S + H DL A VL E+ +++ FGL +RD + + Y
Sbjct: 205 EYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGL---ARD--IHHID-YYKKTTNGRLP 256
Query: 236 ---TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNFGALDM 291
PE L + T +S ++SFG +L ++ + P P +
Sbjct: 257 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----------VEELFKL 305
Query: 292 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 350
++ + + N ++E ++ + C P +RP K LV L +
Sbjct: 306 LKEGHRMDKPS-----NCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 414 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAAL 473
+ +M R + AF ++ A+ + ++V + R+ C + +P A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 474 RDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 516
D A + D + AFY + +L H+ + ++E L
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKL 217
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 58/287 (20%), Positives = 106/287 (36%), Gaps = 50/287 (17%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGY 138
GE + +V R + R +AVK + +E + +H + +
Sbjct: 54 GEGSTGIVCLAR---EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 139 CCDGDERLLVAEYMP----NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
G+E ++ E++ D +++ + E Q A L +AL Y ++G
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLN-EEQI---ATVCEAVL---QALAYLHAQGV- 162
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPES 250
++ D+ + +L +G +LS FG +L TP PE + E
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEV 222
Query: 251 VIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310
I+S G ++++++ G+ PP P++ A+ +R L +SH S
Sbjct: 223 DIWSLGIMVIEMVDGE--PPYFSDS-----PVQ----AMKRLRDSPPPKLKNSH---KVS 268
Query: 311 SEEATVVF-DLASRCLQYEPRERPNTKDL-----------VSTLAPL 345
D R L +P+ER ++L L PL
Sbjct: 269 PV-----LRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVPL 310
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 6e-07
Identities = 60/287 (20%), Positives = 115/287 (40%), Gaps = 50/287 (17%)
Query: 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGY 138
G+ A VY + +A+++ P + +E + + ++ + N +
Sbjct: 29 GQGASGTVYTAM---DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 139 CCDGDERLLVAEYMP----NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
GDE +V EY+ D + + E Q I A R L +AL++ S
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMD-EGQ-I--AAVCRECL---QALEFLHSNQV- 137
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPES 250
++ D+ + +L +G +L+ FG +S + + TP PE + P+
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 251 VIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310
I+S G + ++++ G+ PP + P++ AL +I L + S
Sbjct: 198 DIWSLGIMAIEMIEGE--PPYLNEN-----PLR----ALYLIATNGTPELQNPE---KLS 243
Query: 311 SEEATVVF-DLASRCLQYEPRERPNTKDL-----------VSTLAPL 345
+ F D +RCL+ + +R + K+L +S+L PL
Sbjct: 244 AI-----FRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 38/168 (22%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYT 236
I A+ YC + + H DL A +L D + + +++ FG G Y
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 237 PPEYLRNGRVT-PESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295
PE + + PE ++S G +L L+SG ++P F+ G+
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSG-------------SLP--FD--------GQ 217
Query: 296 NILHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDL 338
N+ L + L G + S + +L R L P +R + +
Sbjct: 218 NLKELRERVLRGKYRIPFYMSTDCE---NLLKRFLVLNPIKRGTLEQI 262
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-06
Identities = 51/220 (23%), Positives = 80/220 (36%), Gaps = 35/220 (15%)
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY---IAE 183
L+H + L Y D + LV E N + ++L + E + I
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN----EARHFMHQIIT 123
Query: 184 ALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL-MKNSRDGKSYSTN---LAYTPP 238
+ Y S G + H DL +L N + +++ FGL + + + T Y P
Sbjct: 124 GMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISP 181
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298
E ES ++S G + LL G+ PP V NT L+ +
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGR--PPFDTDTVKNT---------LNKVV-LADY 229
Query: 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
M S L S EA DL + L+ P +R + +
Sbjct: 230 E-MPSFL-----SIEAK---DLIHQLLRRNPADRLSLSSV 260
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 43/270 (15%), Positives = 77/270 (28%), Gaps = 53/270 (19%)
Query: 86 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145
V++ + AVKK +E L R+ L G +G
Sbjct: 74 VHRMK---DKQTGFQCAVKKV-----RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWV 125
Query: 146 LLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALY---IAEALDYCSSEGRPLYHD 198
+ E + +L + + E++ Y E L+Y + L+ D
Sbjct: 126 NIFMELLEGGSLGQLIKQMGCLPEDR---------ALYYLGQALEGLEYLHTRRI-LHGD 175
Query: 199 LNAYRVLFDENGDP-RLSCFGLMKNSRDGKSYSTNLAY-----TP----PEYLRNGRVTP 248
+ A VL +G L FG + + L T PE +
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 235
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308
+ I+S ++L +L+G P P+ + +
Sbjct: 236 KVDIWSSCCMMLHMLNGC--HPWTQY---FRGPLCLKIASEPPPIREIPPSC-------- 282
Query: 309 FSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+ L+ EP R + +L
Sbjct: 283 --APLTA---QAIQEGLRKEPVHRASAMEL 307
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 40/196 (20%), Positives = 68/196 (34%), Gaps = 22/196 (11%)
Query: 86 VYKGRLQDGNDNR--RWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCC 140
VY+ D R +A+K ++ DP + EA G+L+ + + +
Sbjct: 50 VYEAE-----DTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGE 104
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DL 199
+ + + LA L + + + I ALD + G H D+
Sbjct: 105 IDGQLYVDMRLINGVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDV 160
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNGRVTPESVIFS 254
+L + L FG+ + D K L Y PE T + I++
Sbjct: 161 KPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYA 220
Query: 255 FGTVLLDLLSGKHIPP 270
VL + L+G PP
Sbjct: 221 LTCVLYECLTGS--PP 234
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} Length = 338 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 20/150 (13%), Positives = 49/150 (32%), Gaps = 19/150 (12%)
Query: 384 DLTAIHQILVMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYS- 442
DL +++ K+ + ++++ +E + G+ F+E++ + A+ Y
Sbjct: 148 DLLYEVEVIGFDETKEGKARSDMTVEERIGAADRR---KMDGNSLFKEEKLEEAMQQYEM 204
Query: 443 --QFIDVGTMVSPT-------------VYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 487
++ M + + C + + D A+
Sbjct: 205 AIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNP 264
Query: 488 TAFYMQAVALAKLDMHKDAADMLKEAASLE 517
A + + A A+L A D ++A
Sbjct: 265 KALFRRGKAKAELGQMDSARDDFRKAQKYA 294
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 6e-06
Identities = 65/527 (12%), Positives = 136/527 (25%), Gaps = 155/527 (29%)
Query: 44 LAAGSDGAPAFAEFSLADLRAATNNFSSDFIVS--ESGEKAPNVVYKGRLQDGNDNRRWI 101
L+ + F E L N+ F++S ++ ++ P+++ + ++ +R +
Sbjct: 72 LSKQEEMVQKFVEEVLRI------NY--KFLMSPIKTEQRQPSMMTRMYIE--QRDRLYN 121
Query: 102 AVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP-------- 153
+ F K+ + + KLR + L L + ++ + +
Sbjct: 122 DNQVFAKYNVSRLQPYL-------KLR-QALLELR------PAKNVLIDGVLGSGKTWVA 167
Query: 154 NDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212
D + + + I W L + C+S L + D N
Sbjct: 168 LDVCLSYKVQCKMDFKIFW---LNLK--------NCNSPETVLEMLQKLLYQI-DPNWTS 215
Query: 213 RLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH 272
R N + + L + ++ VLL+
Sbjct: 216 RSD---HSSNIK----LRIHSIQAELRRLLKSKPYENCLL-----VLLN----------- 252
Query: 273 DMVVWNTVPIK-FNFGA-----------LDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 320
V N FN D + H+ H + +E +
Sbjct: 253 ---VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL-- 307
Query: 321 ASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTPQHPLSPMGDAC 380
+ L P++ P V T P S ++ + T + D
Sbjct: 308 -LKYLDCRPQDLPR---EVLTTNPR-----RLS--IIAESIRDG-LATWDNWKHVNCDKL 355
Query: 381 SR---MDLTAIHQILVMTHYKDDEGTNELS-FQE------------WTQ-----QMRDML 419
+ L + + LS F W M +
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDR------LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVN 409
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
+ K V + KE ++ S +++ + + +L H ++ D
Sbjct: 410 KLHKYSLVEKQPKESTISI--PSIYLE----LKVKLENEYAL-H-------RSIVDHYNI 455
Query: 480 QCVYPDWSTAFYMQAVALAKLDM--------HKDAADMLKEAASLEE 518
+ + LD H + +
Sbjct: 456 PKTFDSDD-------LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRM 495
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 8e-06
Identities = 57/349 (16%), Positives = 110/349 (31%), Gaps = 62/349 (17%)
Query: 21 HHHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLADLRAATNNFS-----SDFIV 75
HHH + + S E + D +++ N + +
Sbjct: 1 HHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSI 60
Query: 76 SES-GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRL 132
+ G + V++ N+ ++ A+K + + +E + KL+
Sbjct: 61 LKQIGSGGSSKVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 133 A--NLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY---IAEALDY 187
L Y +V E D L L ++ Y + EA+
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNID-LNSWLKKKKSIDPWERKS-----YWKNMLEAVHT 170
Query: 188 CSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTN---LAYTPPEY 240
G + H DL L +G +L FG+ M+ + + Y PPE
Sbjct: 171 IHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEA 227
Query: 241 LRN-----------GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL 289
+++ +++P+S ++S G +L + GK P I L
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQ--------IINQISKL 277
Query: 290 DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
I N ++ D+ CL+ +P++R + +L
Sbjct: 278 HAIIDPNHEIEFPDIP-----EKDLQ---DVLKCCLKRDPKQRISIPEL 318
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 8e-06
Identities = 46/231 (19%), Positives = 74/231 (32%), Gaps = 52/231 (22%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALY-- 180
L H+ + G+ D D +V E +L + L Y
Sbjct: 97 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--------RKALTEPEARYYLR 148
Query: 181 -IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL-MKNSRDGKSYST---NLA 234
I Y + H DL + +E+ + ++ FGL K DG+
Sbjct: 149 QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 206
Query: 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294
Y PE L + E ++S G ++ LL GK PP + T
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKETY-------------- 250
Query: 295 KNILHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVS 340
I + +S + A L + LQ +P RP +L++
Sbjct: 251 LRI-------KKNEYSIPKHINPVAA---SLIQKMLQTDPTARPTINELLN 291
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 8e-06
Identities = 44/284 (15%), Positives = 84/284 (29%), Gaps = 62/284 (21%)
Query: 85 VVYKGR-LQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKL-RHKRLANLIGY-- 138
V+K DG A+K+ K + E + L +H +++ Y
Sbjct: 26 SVFKCVKRLDG----CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS---HVVRYFS 78
Query: 139 -CCDGDERLLVAEYMPNDTLAKHL--FHWENQTIEWAMRLRVALYIAEALDYCSSEGRPL 195
+ D L+ EY +LA + + + A + L + L Y S L
Sbjct: 79 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--L 136
Query: 196 YH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-------------------Y 235
H D+ + P + ++ + +
Sbjct: 137 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRF 196
Query: 236 TPPEYLR-NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294
E L+ N P++ IF+ ++ + +P + D W+ IR
Sbjct: 197 LANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--WH------------EIRQ 242
Query: 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+ + S E +L + +P RP+ L
Sbjct: 243 GRL-----PRIPQVLSQE----FTELLKVMIHPDPERRPSAMAL 277
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 9e-06
Identities = 46/231 (19%), Positives = 73/231 (31%), Gaps = 52/231 (22%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRL---RVALY-- 180
L H+ + G+ D D +V E +L + L Y
Sbjct: 71 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--------RKALTEPEARYYLR 122
Query: 181 -IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGL-MKNSRDGKSYSTN---LA 234
I Y + H DL + +E+ + ++ FGL K DG+
Sbjct: 123 QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 180
Query: 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294
Y PE L + E ++S G ++ LL GK PP + T
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKETY-------------- 224
Query: 295 KNILHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVS 340
I +S + A L + LQ +P RP +L++
Sbjct: 225 LRIKK-------NEYSIPKHINPVAA---SLIQKMLQTDPTARPTINELLN 265
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 50/238 (21%), Positives = 92/238 (38%), Gaps = 37/238 (15%)
Query: 150 EYMPN--DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207
E M D K+++ + I + ++ L +AL++ + ++ D+ +L D
Sbjct: 101 ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD 160
Query: 208 ENGDPRLSCFGL---MKNSRDGKSYSTNLAYTP----PEYLRNGRVTPE----SVIFSFG 256
+G+ +L FG+ + +S T A PE + S ++S G
Sbjct: 161 RSGNIKLCDFGISGQLVDSIAK----TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLG 216
Query: 257 TVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATV 316
L +L +G+ P WN+V F L + + L +S E FS
Sbjct: 217 ITLYELATGR--FPYPK---WNSV-----FDQLTQVVKGDPPQLSNSE-EREFSPS---- 261
Query: 317 VF-DLASRCLQYEPRERPNTKDLVST---LAPLQNRPDVPSYVMLGIPRHEEAPPTPQ 370
F + + CL + +RP K+L+ L + +V YV + + P +P
Sbjct: 262 -FINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPM 318
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 2e-05
Identities = 48/232 (20%), Positives = 84/232 (36%), Gaps = 48/232 (20%)
Query: 176 RVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL-------MKNSRDGKS 228
+V++ + + L Y + + ++ D+ +L + G+ +L FG+ M NS G
Sbjct: 135 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 194
Query: 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH-IPPSHDMVVWNTVPIKFNFG 287
Y PE L+ + +S I+S G L+++ G++ IPP + +
Sbjct: 195 S-----YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 249
Query: 288 AL------------------DMIRGKNILHLMD--------SHLEGNFSSEEATVVF-DL 320
A D I L+D G FS E F D
Sbjct: 250 AAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLE-----FQDF 304
Query: 321 ASRCLQYEPRERPNTKDLVST---LAPLQNRPDVPSYVMLGIPRHEEAPPTP 369
++CL P ER + K L+ D ++ I ++ + PT
Sbjct: 305 VNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQPSTPTH 356
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 3e-05
Identities = 15/128 (11%), Positives = 42/128 (32%), Gaps = 14/128 (10%)
Query: 404 NELSFQEWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP---------- 453
E + +++ +++G V F+ ++ AV Y + + M
Sbjct: 254 KESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASE 313
Query: 454 ----TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADM 509
+ ++C+L + A+ +A + Y + A ++ + A
Sbjct: 314 SFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGD 373
Query: 510 LKEAASLE 517
++ +
Sbjct: 374 FEKVLEVN 381
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 4e-05
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
Query: 138 YCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGR 193
Y + + L LV M L H++H A R Y AE L+ E
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFYAAEICCGLEDLHRER- 306
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYTPPEYLRNGRVTPES 250
+Y DL +L D++G R+S GL + +G++ + Y PE ++N R T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP 366
Query: 251 VIFSFGTVLLDLLSGKHIPP 270
++ G +L ++++G+ P
Sbjct: 367 DWWALGCLLYEMIAGQ--SP 384
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Query: 423 KRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV 482
RG+ F K F A+ Y I++ P Y+ S C++ + + +A +
Sbjct: 30 NRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEI 88
Query: 483 YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 518
PD S A +A A L DA L + +
Sbjct: 89 KPDHSKALLRRASANESLGNFTDAMFDLSVLSLNGD 124
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 5e-05
Identities = 41/293 (13%), Positives = 84/293 (28%), Gaps = 63/293 (21%)
Query: 85 VVYKGRLQDGNDNR--RWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYC 139
++ D R +A+ + ++ +A ++
Sbjct: 46 QFWQAL-----DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV 100
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-D 198
L+VAE++ +L + + + +R +A A D G +
Sbjct: 101 HTRAGGLVVAEWIRGGSLQEVA----DTSPSPVGAIRAMQSLAAAADAAHRAG--VALSI 154
Query: 199 LNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTV 258
+ RV +GD L+ M P+ I G
Sbjct: 155 DHPSRVRVSIDGDVVLAYPATM-----------------------PDANPQDDIRGIGAS 191
Query: 259 LLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF 318
L LL + P + V + + A I +I + +
Sbjct: 192 LYALLVNR--WPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQIS------------ 237
Query: 319 DLASRCLQYEPRERPNT--KDLVSTLAPLQNRPDVPSYVMLGIPRHEEAPPTP 369
+A+R +Q + R + +L+ + +R +V +EAP +
Sbjct: 238 AVAARSVQGDGGIRSASTLLNLMQQATAVADRTEVL-------GPIDEAPVSA 283
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 34/175 (19%), Positives = 61/175 (34%), Gaps = 55/175 (31%)
Query: 181 IAEALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
+ E + + H DL N +L D++ + +L+ FG G+ + T
Sbjct: 133 LLEVICALHKLN--IVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGT 186
Query: 237 P----PEYLRNGRV------TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNF 286
P PE + E ++S G ++ LL+G PP F
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPP-------------FW- 230
Query: 287 GALDMIRGKNILHLMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRER 332
+ + ++ + GN+ S+ DL SR L +P++R
Sbjct: 231 -------HRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK---DLVSRFLVVQPQKR 275
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 7e-05
Identities = 39/174 (22%), Positives = 61/174 (35%), Gaps = 45/174 (25%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL--- 233
+ + Y + H DL +L ++ + R+ FGL + K +
Sbjct: 135 VLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 192
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
Y PE L G + ++S G +L LLSG PP FN
Sbjct: 193 YYIAPEVLH-GTYDEKCDVWSTGVILYILLSGC--PP-------------FN-------- 228
Query: 294 GKNILHLMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKDL 338
G N ++ +G ++ SE A DL + L Y P R + +D
Sbjct: 229 GANEYDILKKVEKGKYTFELPQWKKVSESAK---DLIRKMLTYVPSMRISARDA 279
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 44/202 (21%), Positives = 72/202 (35%), Gaps = 28/202 (13%)
Query: 86 VYKGRLQDGNDNR--RWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCC 140
V+ R D R R +AVK DP +F EA L H + +
Sbjct: 28 VHLAR-----DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 141 DGDERL----LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
+V EY+ TL + + + V +AL++ G +
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG--II 138
Query: 197 H-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTP 248
H D+ ++ ++ FG+ + D + T Y PE R V
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 249 ESVIFSFGTVLLDLLSGKHIPP 270
S ++S G VL ++L+G+ PP
Sbjct: 199 RSDVYSLGCVLYEVLTGE--PP 218
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 8e-05
Identities = 37/141 (26%), Positives = 56/141 (39%), Gaps = 17/141 (12%)
Query: 138 YCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGR 193
Y ++L + + M L HL + + Y AE L++ +
Sbjct: 259 YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNRF- 312
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYS---TNLAYTPPEYLRNGRVTPES 250
+Y DL +L DE+G R+S GL + K ++ T+ Y PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH-GYMAPEVLQKGVAYDSS 371
Query: 251 V-IFSFGTVLLDLLSGKHIPP 270
FS G +L LL G P
Sbjct: 372 ADWFSLGCMLFKLLRGH--SP 390
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 67/292 (22%), Positives = 115/292 (39%), Gaps = 43/292 (14%)
Query: 58 SLADLRAATNNFSSDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFT-KHAWPDPK 115
L ++ + F + + G+ + V+KG N ++ +A+K + A + +
Sbjct: 9 GLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGI---DNRTQKVVAIKIIDLEEAEDEIE 65
Query: 116 QFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP----NDTLAKHLFHWENQTIEW 171
E + + + G + ++ EY+ D L E Q
Sbjct: 66 DIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD-ETQI--- 121
Query: 172 AMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST 231
A LR L + LDY SE + ++ D+ A VL E+G+ +L+ FG+ D +
Sbjct: 122 ATILREIL---KGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177
Query: 232 NLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG 287
TP PE ++ ++ I+S G ++L G+ PP ++ P+K
Sbjct: 178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE--PPHSELH-----PMK---- 226
Query: 288 ALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DLASRCLQYEPRERPNTKDL 338
L +I KN LEGN+S + CL EP RP K+L
Sbjct: 227 VLFLI-PKN----NPPTLEGNYSKP-----LKEFVEACLNKEPSFRPTAKEL 268
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 9e-05
Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 45/173 (26%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL--- 233
+ + Y + H DL +L +++ ++ FGL + K L
Sbjct: 145 VLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTA 202
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
Y PE LR + + ++S G +L LL+G PP F
Sbjct: 203 YYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY--PP-------------FG-------- 238
Query: 294 GKNILHLMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKD 337
G+ ++ +G ++ SE A DL + LQ++ + R + +
Sbjct: 239 GQTDQEILRKVEKGKYTFDSPEWKNVSEGA---KDLIKQMLQFDSQRRISAQQ 288
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 47/233 (20%), Positives = 82/233 (35%), Gaps = 32/233 (13%)
Query: 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209
E M T A+ L I + ++ + I +AL Y + ++ D+ +L DE
Sbjct: 104 ELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER 161
Query: 210 GDPRLSCFGL---MKNSRDGKSYSTNLAYTPPEYLRNGRVTPE-----SVIFSFGTVLLD 261
G +L FG+ + + + + AY PE + T + ++S G L++
Sbjct: 162 GQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221
Query: 262 LLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF-DL 320
L +G+ P + T F L + + L FS + F
Sbjct: 222 LATGQ--FPYKN---CKTD-----FEVLTKVLQEEPPLLPG---HMGFSGD-----FQSF 263
Query: 321 ASRCLQYEPRERPNTKDLVST---LAPLQNRPDVPSYVMLGIPRHEEAPPTPQ 370
CL + R+RP L+ DV S+ + + E P
Sbjct: 264 VKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPRSGPS 316
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 44/172 (25%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL--- 233
+ AL Y S+ + H DL +LF + ++ FGL + + + +
Sbjct: 133 MMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTA 190
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
Y PE + VT + I+S G V+ LL+G P F
Sbjct: 191 LYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LP-------------FT-------- 226
Query: 294 GKNILHLMDSHLEGNFS--------SEEATVVFDLASRCLQYEPRERPNTKD 337
G ++ + + + +A DL + L +P RP+
Sbjct: 227 GTSLEEVQQKATYKEPNYAVECRPLTPQAV---DLLKQMLTKDPERRPSAAQ 275
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 42/198 (21%), Positives = 69/198 (34%), Gaps = 29/198 (14%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
+Y D N N R + +K D E + ++ H + + +
Sbjct: 95 WIYLAL--DRNVNGRPVVLK--GLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEH 150
Query: 142 GDERL-----LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
D +V EY+ +L + Q + A + L I AL Y S G +Y
Sbjct: 151 TDRHGDPVGYIVMEYVGGQSLKRSK----GQKLPVAEAIAYLLEILPALSYLHSIGL-VY 205
Query: 197 HDL---NAYRVLFDENGDPRLSCFGLMKN-SRDGKSYSTNLAYTPPEYLRNGRVTPESVI 252
+DL N ++ E +L G + + G Y T + PE +R T + I
Sbjct: 206 NDLKPEN---IMLTEEQ-LKLIDLGAVSRINSFGYLYGT-PGFQAPEIVR-TGPTVATDI 259
Query: 253 FSFGTVLLDLLSGKHIPP 270
++ G L L P
Sbjct: 260 YTVGRTLAALTLDL--PT 275
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 56/337 (16%), Positives = 106/337 (31%), Gaps = 58/337 (17%)
Query: 22 HHQQNHRNHPTQPSNGTEGSGGLAAGSDGAPAFAEFSLADLRAATNNFSSDFIVSES-GE 80
+H +H ++ +G + ++ + + + + E G
Sbjct: 2 RGSHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGS 61
Query: 81 KAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC 140
A VV++ + K D +E + +L H +L NL
Sbjct: 62 GAFGVVHRCVEKATGRVF---VAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 141 DGDERLLVAEYMP-----NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPL 195
D E +L+ E++ + A+ E + I + MR E L + +
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY-MRQ-----ACEGLKHMHEHS--I 170
Query: 196 YH-DLNAYRVLFDENGDPRLSC--FGLMKNSRDGKSYSTNLA---YTPPEYLRNGRVTPE 249
H D+ ++ + + FGL + A + PE + V
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 230
Query: 250 SVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309
+ +++ G + LLSG + P F G++ L + + ++
Sbjct: 231 TDMWAIGVLGYVLLSG--LSP---------------F------AGEDDLETLQNVKRCDW 267
Query: 310 S---------SEEATVVFDLASRCLQYEPRERPNTKD 337
S EA D LQ EPR+R D
Sbjct: 268 EFDEDAFSSVSPEAK---DFIKNLLQKEPRKRLTVHD 301
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 29/176 (16%)
Query: 175 LRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN- 232
+ + +A+ +++ +S R H DL A +L E ++ FGL ++ Y
Sbjct: 196 ICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 253
Query: 233 -----LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIP-PSHDMVVWNTVPIKFNF 286
L + PE + + T +S ++SFG +L ++ S P P +K +
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG----------VKIDE 303
Query: 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
++ M + ++++ E ++ C EP +RP +LV L
Sbjct: 304 EFCRRLKEG---TRMRA---PDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHL 350
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 12/96 (12%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 424 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY 483
G+ ++ ++F A++ Y++ ++ T R+ + + A+ A
Sbjct: 11 EGNKFYKARQFDEAIEHYNKAWELHK--DITYLNNRAAAEYEKGEYETAISTLNDAVEQG 68
Query: 484 PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519
+ + + + + A++ LK+ +K
Sbjct: 69 REMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQK 104
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 40/173 (23%), Positives = 58/173 (33%), Gaps = 45/173 (26%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL--- 233
+ A+ YC + H DL LF + +L FGL + GK T +
Sbjct: 115 VLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP 172
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
Y P+ L G PE +S G ++ LL G PP F+
Sbjct: 173 YYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGY--PP-------------FS-------- 208
Query: 294 GKNILHLMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKD 337
+M EG F+ S +A L R L P++R +
Sbjct: 209 APTDSEVMLKIREGTFTFPEKDWLNVSPQAE---SLIRRLLTKSPKQRITSLQ 258
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 67/234 (28%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYI 181
++ H + L + + +L+ E + D LA+ E + ++ I
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS-FIK-----QI 124
Query: 182 AEALDYCSSEGRPLYHDLN-AYR------VLFDENGDP----RLSCFGLMKNSRDGKSYS 230
+ ++Y H A+ ++ + P +L FGL DG +
Sbjct: 125 LDGVNYL--------HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 231 TNLA---YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG 287
+ PE + + E+ ++S G + LLSG P F
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASP-------------F--- 218
Query: 288 ALDMIRGKNILHLMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRER 332
G + + ++ SE A D + L E R+R
Sbjct: 219 -----LGDTKQETLANITSVSYDFDEEFFSHTSELAK---DFIRKLLVKETRKR 264
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 3e-04
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 12/141 (8%)
Query: 138 YCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE---ALDYCSSEGR 193
Y + L LV M + H+++ + + R Y A+ L++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-RAIFYTAQIVSGLEHLHQRN- 309
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP----PEYLRNGRVTPE 249
+Y DL VL D++G+ R+S GL + G++ + A TP PE L
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 250 SVIFSFGTVLLDLLSGKHIPP 270
F+ G L ++++ + P
Sbjct: 370 VDYFALGVTLYEMIAAR--GP 388
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 3e-04
Identities = 43/234 (18%), Positives = 72/234 (30%), Gaps = 58/234 (24%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYI 181
LRH L NL D +E +++ E+M + +A MR +
Sbjct: 210 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR-----QV 264
Query: 182 AEALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSC--FGLMKNSRDGKSYSTNLA- 234
+ L + H DL N ++F L FGL + +S
Sbjct: 265 CKGLCHMHENN--YVHLDLKPEN---IMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 319
Query: 235 --YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI 292
+ PE V + ++S G + LLSG + P F
Sbjct: 320 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG--LSP---------------F------ 356
Query: 293 RGKNILHLMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKD 337
G+N + + +++ SE+ D + L +P R
Sbjct: 357 GGENDDETLRNVKSCDWNMDDSAFSGISEDGK---DFIRKLLLADPNTRMTIHQ 407
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 49/279 (17%), Positives = 94/279 (33%), Gaps = 56/279 (20%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHK--RLANLIGYCC 140
V++ N+ ++ A+K + + +E + KL+ ++ L Y
Sbjct: 43 KVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 98
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY---IAEALDYCSSEGRPLYH 197
+V E D L L ++ Y + EA+ G + H
Sbjct: 99 TDQYIYMVMECGNID-LNSWLKKKKSIDPWERKS-----YWKNMLEAVHTIHQHG--IVH 150
Query: 198 -DLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTN---LAYTPPEYLRN------- 243
DL L +G +L FG+ M+ + + Y PPE +++
Sbjct: 151 SDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 244 ----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299
+++P+S ++S G +L + GK P I L I N
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQ--------IINQISKLHAIIDPNHEI 259
Query: 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
++ D+ CL+ +P++R + +L
Sbjct: 260 EFPDIP-----EKDLQ---DVLKCCLKRDPKQRISIPEL 290
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 41/175 (23%), Positives = 63/175 (36%), Gaps = 55/175 (31%)
Query: 181 IAEALDYCSSEGRPLYH-DL---NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT 236
+ EA+ + + + H DL N +L D+N RLS FG + G+ L T
Sbjct: 209 LLEAVSFLHANN--IVHRDLKPEN---ILLDDNMQIRLSDFGFSCHLEPGEKLRE-LCGT 262
Query: 237 P----PEYLRNGRV------TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNF 286
P PE L+ E +++ G +L LL+G PP F
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP-------------F-- 305
Query: 287 GALDMIRGKNILHLMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRER 332
+ + ++ +EG + S DL SR LQ +P R
Sbjct: 306 ------WHRRQILMLRMIMEGQYQFSSPEWDDRSSTVK---DLISRLLQVDPEAR 351
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 50/278 (17%), Positives = 97/278 (34%), Gaps = 54/278 (19%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP--KQFADEAWGVGKLRHK--RLANLIGYCC 140
V++ N+ ++ A+K + + +E + KL+ ++ L Y
Sbjct: 24 KVFQVL----NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 79
Query: 141 DGDERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH- 197
+V E D L W + ++I+ R + EA+ G + H
Sbjct: 80 TDQYIYMVMECGNID-----LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--IVHS 132
Query: 198 DLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTN---LAYTPPEYLRN-------- 243
DL L +G +L FG+ M+ + + Y PPE +++
Sbjct: 133 DLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 191
Query: 244 ---GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300
+++P+S ++S G +L + GK P I L I N
Sbjct: 192 KSKSKISPKSDVWSLGCILYYMTYGK--TPFQQ--------IINQISKLHAIIDPNHEIE 241
Query: 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
++ D+ CL+ +P++R + +L
Sbjct: 242 FPDIP-----EKDLQ---DVLKCCLKRDPKQRISIPEL 271
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 36/188 (19%)
Query: 188 CSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN---------LAYTPP 238
G + +P+ + +K + G + + Y
Sbjct: 203 PPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSL 262
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGK----------------HI---------PPSHD 273
E L + I+S + +L +G HI P
Sbjct: 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKL 322
Query: 274 MVVWNTVPIKFN-FGALDMIRGKNILHLMDSHLEG-NFSSEEATVVFDLASRCLQYEPRE 331
+V F G L I L + +E +S EEA D L+ P +
Sbjct: 323 IVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEK 382
Query: 332 RPNTKDLV 339
R + +
Sbjct: 383 RATAAECL 390
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 46/245 (18%), Positives = 81/245 (33%), Gaps = 58/245 (23%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYT 236
I A++YC + H DL +L D+N + +++ FGL DG T + Y
Sbjct: 117 IICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 174
Query: 237 PPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295
PE + PE ++S G VL +L G +P F+ +
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVG-RLP--------------FD--------DE 211
Query: 296 NILHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 350
I +L + S A L R + +P +R T+ ++ P
Sbjct: 212 FIPNLFKKVNSCVYVMPDFLSPGAQ---SLIRRMIVADPMQR-------ITIQEIRRDP- 260
Query: 351 VPSYVMLGIPRHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQE 410
+ + +P + Q S D + ++ + +D L E
Sbjct: 261 ---WFNVNLPDYLRPMEEVQG---------SYADSRIVSKLGEAMGFSEDYIVEALRSDE 308
Query: 411 WTQQM 415
+
Sbjct: 309 NNEVK 313
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 45/153 (29%), Positives = 63/153 (41%), Gaps = 16/153 (10%)
Query: 126 KLRHKRLANLIGYCCDGDERL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE- 183
RH L L Y +RL V EY L HL E E R Y AE
Sbjct: 204 NSRHPFLTALK-YSFQTHDRLCFVMEYANGGELFFHL-SRERVFSED----RARFYGAEI 257
Query: 184 --ALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK-NSRDGKSYST---NLAYTP 237
ALDY SE +Y DL ++ D++G +++ FGL K +DG + T Y
Sbjct: 258 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 238 PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPP 270
PE L + + G V+ +++ G+ P
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP 348
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 8e-04
Identities = 39/181 (21%), Positives = 59/181 (32%), Gaps = 54/181 (29%)
Query: 181 IAEALDYCSSEGRPLYHDLN-AYR------VLF---DENGDPRLSCFGLMKNSRDGKSYS 230
I EA+ Y H +N A+R +L+ N +L+ FG K + S +
Sbjct: 170 IGEAIQYL--------HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 231 TNLAYTP----PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNF 286
T YTP PE L + ++S G ++ LL G PP + P
Sbjct: 222 T-PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNHGLAISP----- 273
Query: 287 GALDMIRGKNILHLMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKD 337
+ G + SEE L L+ EP +R +
Sbjct: 274 ------------GMKTRIRMGQYEFPNPEWSEVSEEVK---MLIRNLLKTEPTQRMTITE 318
Query: 338 L 338
Sbjct: 319 F 319
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 8e-04
Identities = 38/234 (16%), Positives = 71/234 (30%), Gaps = 67/234 (28%)
Query: 126 KLRHKRLANLIGYCCDGDERLLVAEYMPN----DTLAKHLFHWENQTIEWAMRLRVALYI 181
+++H + L + + +L+ E + D LA+ E + E ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE-FLK-----QI 123
Query: 182 AEALDYCSSEGRPLYHDLN-AYR------VLF----DENGDPRLSCFGLMKNSRDGKSYS 230
+ Y H L A+ ++ ++ FGL G +
Sbjct: 124 LNGVYYL--------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 231 TNLA---YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG 287
+ PE + + E+ ++S G + LLSG P F
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASP-------------F--- 217
Query: 288 ALDMIRGKNILHLMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRER 332
G + + N+ S A D R L +P++R
Sbjct: 218 -----LGDTKQETLANVSAVNYEFEDEYFSNTSALAK---DFIRRLLVKDPKKR 263
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 9e-04
Identities = 36/173 (20%), Positives = 59/173 (34%), Gaps = 45/173 (26%)
Query: 181 IAEALDYCSSEGRPLYH-DLNAYRVLF---DENGDPRLSCFGLMKNSRDGKSYSTNL--- 233
+ + Y + H DL +L +++ D ++ FGL + +
Sbjct: 130 VFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
Query: 234 AYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293
Y PE LR G + ++S G +L LLSG PP F
Sbjct: 188 YYIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPP-------------FY-------- 223
Query: 294 GKNILHLMDSHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKD 337
GKN ++ G ++ S++A DL + L + P R
Sbjct: 224 GKNEYDILKRVETGKYAFDLPQWRTISDDAK---DLIRKMLTFHPSLRITATQ 273
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 527 | |||
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.98 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.92 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.85 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.84 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.8 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.77 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.74 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.74 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.73 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.72 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.72 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.71 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.71 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.7 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.68 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.65 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.63 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.63 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.62 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.61 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.61 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.61 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.61 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.6 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.6 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.59 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.59 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.58 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.57 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.57 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.57 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.56 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.56 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.56 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.55 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.55 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.54 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.54 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.54 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.54 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.53 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.52 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.51 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.51 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.5 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.49 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.49 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.47 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.46 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.46 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.44 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.43 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.41 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.4 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.4 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.39 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.39 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.38 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.38 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.38 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.38 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.37 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.36 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.35 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.35 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.34 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.33 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.33 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.33 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.33 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.33 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.32 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.32 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.31 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.31 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.3 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.3 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.3 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.29 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.29 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.29 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.28 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.28 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.28 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.27 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.27 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.27 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.26 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.26 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.26 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.26 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.26 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.26 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.25 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.25 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.24 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.24 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.24 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.24 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.24 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.23 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.23 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.23 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.22 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.22 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.21 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.2 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.19 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.19 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.19 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.19 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.18 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.18 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.16 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.15 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.14 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.13 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.13 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.12 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.12 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.12 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.11 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.1 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.09 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.09 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.09 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.09 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.08 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.07 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.07 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.06 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.06 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.05 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.05 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.05 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.05 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.04 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.04 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.04 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.04 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.03 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.03 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.02 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.02 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.02 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.01 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.01 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.0 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.0 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.0 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.0 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.99 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 98.99 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 98.99 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.98 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.98 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.98 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.97 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 98.97 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.96 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 98.96 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.96 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 98.96 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 98.96 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.95 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.95 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.95 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.95 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.94 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.94 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.94 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.92 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.92 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.91 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.91 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.9 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.9 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.88 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.87 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.87 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.86 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.86 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.84 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.8 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.79 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.79 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.77 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.77 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.75 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.75 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.73 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.73 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.72 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.69 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.67 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.64 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.61 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.59 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.57 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.57 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.56 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.55 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.53 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.53 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.52 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.51 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.49 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.49 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.42 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.4 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.4 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.4 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.36 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.36 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.36 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.35 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.34 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.32 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.23 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.23 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.21 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.09 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.07 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 98.05 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 98.04 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.99 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.97 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.94 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.91 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.89 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.77 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.75 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.74 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.72 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.69 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.69 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.67 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.61 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.58 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.57 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.5 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.5 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.46 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.42 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.37 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.32 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.32 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.28 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.26 |
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-60 Score=465.24 Aligned_cols=250 Identities=19% Similarity=0.263 Sum_probs=214.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.++++||+|+||+||+|+++. +|+.||||++........+.+.+|+.+|++++|||||+++++|.+.+.+||||||
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~---tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRS---SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred cEEeEEeecCcCeEEEEEEECC---CCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 6678899999999999999988 8899999999877666677899999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----C
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----K 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----~ 227 (527)
|+||+|.+++.+ ..+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+..... .
T Consensus 153 ~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 153 LEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp CTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 999999999963 46999999999999999999999999 999999999999999999999999999875432 4
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
+.+||+.|||||++.+..|+.++||||||||||||++|++||.+.+... ....+... . ....
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-----------~~~~i~~~-----~--~~~~ 290 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----------AMKMIRDN-----L--PPRL 290 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----------HHHHHHHS-----S--CCCC
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-----------HHHHHHcC-----C--CCCC
Confidence 5689999999999999999999999999999999999999997643111 11111110 0 0111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
..+...++.+.+||.+||+.||++|||+.|+++|-+...
T Consensus 291 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~ 329 (346)
T 4fih_A 291 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 329 (346)
T ss_dssp SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcC
Confidence 223455678999999999999999999999999866543
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-60 Score=468.12 Aligned_cols=250 Identities=16% Similarity=0.208 Sum_probs=208.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
..+.+++.||+|+||+||+|+++. +|+.||||++++..... .+.+.+|+.+|++|+|||||++++++.+.+.+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi 100 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTE---DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI 100 (350)
T ss_dssp CCEEEEEEC------CEEEEEETT---TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECC---CCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 457789999999999999999987 88999999997654332 4579999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
|||||+||+|.++|.......+++..++.|+.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+.....
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 999999999999997656667899999999999999999999999 999999999999999999999999999876543
Q ss_pred ---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 ---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
.+.+||+.|||||++.+..|+.++||||||||||||+||+.||.+.+... . +..+...
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-----------~--------~~~i~~~ 240 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-----------L--------VLKIISG 240 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----------H--------HHHHHHT
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-----------H--------HHHHHcC
Confidence 24579999999999999999999999999999999999999997643211 0 1111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.. ...+...+..+.+||.+||+.||++|||+.++++|-+
T Consensus 241 ~~-~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~ 279 (350)
T 4b9d_A 241 SF-PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGF 279 (350)
T ss_dssp CC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred CC-CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHH
Confidence 11 1233455677999999999999999999999998744
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-60 Score=466.32 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=207.7
Q ss_pred ccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 74 IVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.++||+|+||+||+|++.. ...+++.||||+++.......++|.+|+++|++|+|||||+++|+|.+.+.++|||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 55689999999999999763 2226789999999865544457899999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcC-------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 152 MPNDTLAKHLFHWE-------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 152 ~~~g~L~~~l~~~~-------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
|++|+|.++|+... ...++|.+++.|+.||++||.|||+++ ||||||||+||||++++++||+|||
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~DFG 203 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFG 203 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEcccc
Confidence 99999999997532 246999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHH
Q 009750 219 LMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 219 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
+++..... ....||+.|||||++.+..++.++|||||||+||||+| |+.||.+.+... ...
T Consensus 204 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~-----------~~~- 271 (329)
T 4aoj_A 204 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-----------AID- 271 (329)
T ss_dssp ----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH-----------HHH-
T ss_pred cceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH-----------HHH-
Confidence 99865432 23568999999999999999999999999999999999 899987542110 111
Q ss_pred HhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 292 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
.+....+...|..+++.+.+|+.+||+.||++|||+.+|+++|+.+...+
T Consensus 272 --------~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 272 --------CITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp --------HHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred --------HHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 11112233455566788999999999999999999999999999886543
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-59 Score=456.48 Aligned_cols=254 Identities=22% Similarity=0.299 Sum_probs=210.4
Q ss_pred cccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
...++++||+|+||+||+|.+.. ...+++.||||+++..... ..++|.+|+.+|++|+|||||+++|+|.+.+.++|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 34577889999999999999743 1226788999999765433 35789999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCce
Q 009750 148 VAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPR 213 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~k 213 (527)
|||||++|+|.++|.... ...++|..++.|+.||+.||.|||+++ ||||||||+||||++++++|
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~K 185 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNVK 185 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEE
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCEE
Confidence 999999999999996422 245899999999999999999999999 99999999999999999999
Q ss_pred eecccCccccCC------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchh
Q 009750 214 LSCFGLMKNSRD------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNF 286 (527)
Q Consensus 214 l~DFG~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 286 (527)
|+|||+++.... .....||+.|||||++.++.|+.++|||||||+||||+| |+.||.+.+..
T Consensus 186 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~----------- 254 (308)
T 4gt4_A 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----------- 254 (308)
T ss_dssp ECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-----------
T ss_pred ECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-----------
Confidence 999999986432 234578999999999999999999999999999999999 89998764311
Q ss_pred hHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.+...+......+.|..++..+.+|+.+||+.||++|||+.+|+++|+.+
T Consensus 255 ---------~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 255 ---------DVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ---------HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---------HHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11111112222344566778899999999999999999999999999865
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-60 Score=458.87 Aligned_cols=255 Identities=24% Similarity=0.313 Sum_probs=210.5
Q ss_pred ccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+.++||+|+||+||+|++... ..+++.||||+++.......++|.+|+++|++|+|||||+++|+|.+.+.++|||
T Consensus 15 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~ 94 (299)
T 4asz_A 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVF 94 (299)
T ss_dssp EEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred eEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEE
Confidence 34567899999999999997532 2257899999998655444578999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhc-----------CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 150 EYMPNDTLAKHLFHW-----------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 150 E~~~~g~L~~~l~~~-----------~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
|||++|+|.++|+.. ....++|..++.|+.||++||.|||+++ ||||||||+||||++++++||+|||
T Consensus 95 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 95 EYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp ECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCS
T ss_pred EcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCcc
Confidence 999999999999752 2357999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHH
Q 009750 219 LMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 219 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
+|+..... ....||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.+... ...
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~-----------~~~- 241 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-----------VIE- 241 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----------HHH-
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----------HHH-
Confidence 99865432 23458999999999999999999999999999999999 899987543110 111
Q ss_pred HhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 292 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.+........|..+++.+.+|+.+||+.||++|||+.+|+..|+.+..
T Consensus 242 --------~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 242 --------CITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp --------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 111112233455667789999999999999999999999999988754
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-58 Score=446.41 Aligned_cols=255 Identities=20% Similarity=0.286 Sum_probs=204.3
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+++..+.++||+|+||+||+|++.. .||||+++...... .+.|.+|+.+|++++|||||+++|+|.+ +.++
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~------~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~ 107 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLA 107 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC------cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEE
Confidence 3445577889999999999998753 39999997554322 4579999999999999999999999864 5689
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
||||||+||+|.++|.. ....+++..++.|+.||+.||.|||+++ ||||||||+||||++++++||+|||+|+.....
T Consensus 108 iVmEy~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EEEECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EEEEcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 99999999999999964 4567999999999999999999999999 999999999999999999999999999865422
Q ss_pred ------CccccCCccCCcccccC---CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 227 ------KSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 227 ------~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
...+||+.|||||++.+ ++|+.++|||||||+||||+||+.||.+.+.... .........
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~----------~~~~~~~~~- 254 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ----------IIFMVGRGY- 254 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH----------HHHHHHTTC-
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH----------HHHHHhcCC-
Confidence 34579999999999964 4589999999999999999999999975432110 011111100
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..+ .....+..++..+.+||.+||+.||++|||+.+|+++|+.++.
T Consensus 255 ---~~p-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 255 ---ASP-DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp ---CCC-CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred ---CCC-CcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 000 1112344566789999999999999999999999999998865
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-58 Score=462.26 Aligned_cols=250 Identities=19% Similarity=0.259 Sum_probs=213.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.++++||+|+||.||+|+++. +|+.||||++........+.+.+|+.+|++++|||||+++++|.+.+.+|||||
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~---tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRS---SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcEeeeEeccCcCcEEEEEEECC---CCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 36678899999999999999988 889999999987766667789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
||+||+|.+++.. ..+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+.....
T Consensus 229 y~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 229 FLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp CCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred CCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCccc
Confidence 9999999999963 46999999999999999999999999 999999999999999999999999999875432
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
.+.+||+.|||||++.+..|+.++||||||||||||++|+.||.+.+... ....+... .. ..
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-----------~~~~i~~~-----~~--~~ 366 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----------AMKMIRDN-----LP--PR 366 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----------HHHHHHHS-----CC--CC
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-----------HHHHHHcC-----CC--CC
Confidence 45689999999999999999999999999999999999999997643211 11111110 00 01
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...+...++.+.+||.+||+.||++|||+.|+++|-+..
T Consensus 367 ~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~ 405 (423)
T 4fie_A 367 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLA 405 (423)
T ss_dssp CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhc
Confidence 112234567799999999999999999999999986643
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-58 Score=451.19 Aligned_cols=248 Identities=17% Similarity=0.119 Sum_probs=208.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+.+..+||+|+||+||+|+++. +|+.||||+++.... +.+|+.+|++|+|||||++++++.+++.+||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~---~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQ---TGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECC---CCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 445567789999999999999988 889999999976432 357999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-CceeecccCccccCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~~~-- 226 (527)
|||+||+|.++|.. .+.+++..++.|+.||+.||.|||+++ ||||||||+||||+.+| ++||+|||+|+.....
T Consensus 130 Ey~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred eccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 99999999999973 467999999999999999999999999 99999999999999998 6999999999865432
Q ss_pred -------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 227 -------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 227 -------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
...+||+.|||||++.+..|+.++|||||||+||||+||+.||.+.+.... ...
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-------------------~~~ 267 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-------------------CLK 267 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-------------------HHH
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-------------------HHH
Confidence 235799999999999999999999999999999999999999976432211 011
Q ss_pred hccccc-CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 300 LMDSHL-EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 300 ~~~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+..... ...++..+++.+.+||.+||+.||.+|||+.|++++|.....
T Consensus 268 i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 268 IASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp HHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 111100 012344566779999999999999999999999999887643
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-59 Score=449.90 Aligned_cols=244 Identities=18% Similarity=0.188 Sum_probs=209.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC---CCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH---AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
++.+++.||+|+||+||+|+++. +++.||||++.+. .....+.+.+|+++|++|+|||||++++++.+.+.+||
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~---~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi 109 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELA---TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF 109 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccEEEEEEecccCeEEEEEEECC---CCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 46688899999999999999988 8899999999754 23345789999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
|||||+||+|.+++. ..+.+++..++.|+.||+.||.|||+++ ||||||||+||||+.++++||+|||+|+.....
T Consensus 110 vmEy~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 110 GLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp EECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred EEecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 999999999999997 4467999999999999999999999999 999999999999999999999999999875422
Q ss_pred -----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 227 -----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
.+.+||+.|||||++.+..|+.++|||||||+||||+||+.||.+.+... . +..+.
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-----------~--------~~~i~ 247 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-----------I--------FAKII 247 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------H--------HHHHH
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-----------H--------HHHHH
Confidence 35689999999999999999999999999999999999999997643211 0 11111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
.. ...++...++.+.+||.+||+.||++|||++|++.+
T Consensus 248 ~~--~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 248 KL--EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp HT--CCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred cC--CCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 11 122445566789999999999999999999986443
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-58 Score=441.06 Aligned_cols=246 Identities=17% Similarity=0.228 Sum_probs=200.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEe----CCeeeE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLL 147 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~l 147 (527)
+..+||+|+||+||+|.+.. +++.||||++...... ..+.|.+|+++|++|+|||||+++++|.+ ...+||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECC---CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 34568999999999999987 8899999999765332 24579999999999999999999999875 345899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC-CccccccCCCceEeCC-CCCceeecccCccccCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDE-NGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~~ 225 (527)
|||||+||+|.+++. ....+++..++.|+.||+.||.|||+++ +||||||||+||||+. ++.+||+|||+|+....
T Consensus 107 vmEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 107 VTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 999999999999997 3467999999999999999999999986 5999999999999984 79999999999986544
Q ss_pred C--CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 226 G--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 226 ~--~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
. .+.+||+.|||||++.+ .|+.++|||||||+||||+||+.||.+.+.... ....... .
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~----------~~~~i~~--------~ 245 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ----------IYRRVTS--------G 245 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH----------HHHHHTT--------T
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH----------HHHHHHc--------C
Confidence 3 35689999999999864 699999999999999999999999965421110 0111111 1
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.....++...++.+.+||.+||+.||++|||+.++++|-+
T Consensus 246 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~ 285 (290)
T 3fpq_A 246 VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence 1111122233467899999999999999999999999855
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-58 Score=434.15 Aligned_cols=247 Identities=20% Similarity=0.237 Sum_probs=197.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||+||+|++.. +++.||||++++... ...+.+.+|+.+|++++|||||++++++.+.+.+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ 89 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTT---TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII 89 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTT---TCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 356688899999999999999987 889999999976532 23467999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
|||||+ +|+|.+++. ..+.+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+...+.
T Consensus 90 ivmEy~-~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 90 MVIEYA-GNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEEECC-CEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EEEeCC-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999999 679999997 4567999999999999999999999999 999999999999999999999999999875443
Q ss_pred ---CccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.+.+||+.|||||++.+..+ +.++|||||||++|||+||+.||.+.+... ... .+..
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~-----------~~~--------~i~~ 226 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-----------LFK--------NISN 226 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHH--------HHHH
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH-----------HHH--------HHHc
Confidence 45689999999999998876 579999999999999999999997543110 011 1111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
. ...++...++.+.+||.+||+.||++|||+.|+++|-+.
T Consensus 227 ~--~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~ 266 (275)
T 3hyh_A 227 G--VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266 (275)
T ss_dssp T--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHH
T ss_pred C--CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccc
Confidence 1 112344556778999999999999999999999998654
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-57 Score=488.83 Aligned_cols=240 Identities=18% Similarity=0.205 Sum_probs=193.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCe----
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE---- 144 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---- 144 (527)
..+.+++.||+|+||+||+|.+... +++.||||++...... ..+.+.+|+.++++++|||||++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNV--NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGG--TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCC--CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 3466788899999999999998642 4788999998754321 23568999999999999999999999987665
Q ss_pred -eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 145 -RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 145 -~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
.||||||++|++|.+++. ..+++..++.|+.||+.||.|||+++ ||||||||+|||++.+ .+||+|||+++..
T Consensus 158 ~~~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eeEEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhc
Confidence 799999999999998874 27999999999999999999999999 9999999999999985 8999999999988
Q ss_pred CCCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 224 RDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 224 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
.......||+.|+|||++.+.. +.++||||||||||+|++|.+||.+.... .+
T Consensus 232 ~~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------------------~~--- 284 (681)
T 2pzi_A 232 NSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD-----------------------GL--- 284 (681)
T ss_dssp TCCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS-----------------------SC---
T ss_pred ccCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc-----------------------cc---
Confidence 7777788999999999997654 88999999999999999998876431100 00
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHhccc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPN-TKDLVSTLAPL 345 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-~~~vl~~L~~~ 345 (527)
.........+..+.+||.+||+.||.+||+ ++++...|..+
T Consensus 285 -~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 -PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp -CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred -cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 000111233467889999999999999996 55555555543
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-58 Score=443.77 Aligned_cols=249 Identities=20% Similarity=0.223 Sum_probs=204.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
++.+++.||+|+||+||+|+...+..+++.||||++++... ....++.+|+++|++++|||||++++++.+.+.+|||
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 46789999999999999999865544789999999976432 1234689999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC---
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--- 225 (527)
||||+||+|.+++. ..+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|++||+|||+|+....
T Consensus 105 mEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 181 (304)
T 3ubd_A 105 LDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181 (304)
T ss_dssp ECCCTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred EEcCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCCc
Confidence 99999999999997 3467999999999999999999999999 99999999999999999999999999986432
Q ss_pred -CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 226 -GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 226 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
..+.+||+.|||||++.+..|+.++|||||||+||||+||+.||.+.+... . +..+...
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-----------~--------~~~i~~~- 241 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE-----------T--------MTMILKA- 241 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------H--------HHHHHHC-
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH-----------H--------HHHHHcC-
Confidence 245689999999999999999999999999999999999999997643211 0 1111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLA 343 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~ 343 (527)
...+|...++.+.+||.+||+.||++||| ++|+++|-+
T Consensus 242 -~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~ 284 (304)
T 3ubd_A 242 -KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284 (304)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGG
T ss_pred -CCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcc
Confidence 12345556778999999999999999998 478888755
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-57 Score=444.27 Aligned_cols=258 Identities=19% Similarity=0.242 Sum_probs=212.9
Q ss_pred CCcccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCC-CccceeEEEEEeC-C
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRH-KRLANLIGYCCDG-D 143 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~-~ 143 (527)
.+.+.+++.||+|+||+||+|.+... ...++.||||+++...... .+.|.+|+++|.+++| ||||+++|+|.+. .
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 34566788999999999999997652 2245789999997654322 4579999999999965 8999999999764 5
Q ss_pred eeeEEEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~ 209 (527)
.++||||||++|+|.++|+... ...+++..++.|+.||++||.|||+++ ||||||||+|||++++
T Consensus 143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~ 221 (353)
T 4ase_A 143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEK 221 (353)
T ss_dssp CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGG
T ss_pred EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCCC
Confidence 6899999999999999997532 345899999999999999999999999 9999999999999999
Q ss_pred CCceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccc
Q 009750 210 GDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPI 282 (527)
Q Consensus 210 ~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~ 282 (527)
+++||+|||+|+...... ...||+.|||||++.+..|+.++|||||||+||||+| |+.||++.....
T Consensus 222 ~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~------ 295 (353)
T 4ase_A 222 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------ 295 (353)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------
T ss_pred CCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH------
Confidence 999999999998754332 3467899999999999999999999999999999998 899997643211
Q ss_pred cchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 283 KFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.+...+....+...|..+++.+.+||.+||+.||++|||+.+++++|+.+.
T Consensus 296 -------------~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 296 -------------EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp -------------HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------------HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 111222222334455566778999999999999999999999999998764
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-56 Score=432.00 Aligned_cols=259 Identities=19% Similarity=0.237 Sum_probs=196.3
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHH--HHHHHHHhhcCCCCccceeEEEEEeCC----eeeE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ--FADEAWGVGKLRHKRLANLIGYCCDGD----ERLL 147 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~--~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~l 147 (527)
+.++||+|+||+||+|++ +|+.||||+++... .+. +..|+.++.+++|||||+++|+|.+.+ .++|
T Consensus 7 L~~~iG~G~fG~Vy~~~~-----~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp EEEEEEECSSSEEEEEEE-----TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred EEEEEeeCCCeEEEEEEE-----CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 445799999999999987 56889999997543 233 345666667889999999999998754 5799
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC--------CCccccccCCCceEeCCCCCceeecccC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE--------GRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~--------~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
|||||++|+|.++|+. ..+++..+++|+.|++.||.|||++ + ||||||||+||||+.++++||+|||+
T Consensus 79 V~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCC
Confidence 9999999999999963 4699999999999999999999986 6 99999999999999999999999999
Q ss_pred ccccCCC--------CccccCCccCCcccccCC------cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccch
Q 009750 220 MKNSRDG--------KSYSTNLAYTPPEYLRNG------RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 220 a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 285 (527)
++..... ...+||+.|||||++.+. .++.++||||||||||||+||.+||................
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc
Confidence 9865432 234789999999999764 47789999999999999999998875443221110000000
Q ss_pred hhHHHHHhcCcchhhcccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
....... ...+.....++.+| ...+..+.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus 235 ~~~~~~~----~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 235 DPSVEEM----RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp SCCHHHH----HHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cchHHHH----HHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 0000000 00111222223332 34567889999999999999999999999999987643
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-55 Score=425.25 Aligned_cols=244 Identities=17% Similarity=0.247 Sum_probs=190.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCC------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD------ 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------ 143 (527)
++.+++.||+|+||+||+|+++. +++.||||+++..... ..+.+.+|+.+|++|+|||||+++++|.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKV---DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETT---TCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hCEEeeEEecCCCeEEEEEEECC---CCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 35578899999999999999987 8899999999765422 2457999999999999999999999997654
Q ss_pred ------eeeEEEEecCCCCHhHHhhhcCC-CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeec
Q 009750 144 ------ERLLVAEYMPNDTLAKHLFHWEN-QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSC 216 (527)
Q Consensus 144 ------~~~lv~E~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~D 216 (527)
.+|||||||++|+|.+++..... ...++..++.|+.||+.||.|||+++ ||||||||+||||+.++++||+|
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEcc
Confidence 36999999999999999974322 23466778999999999999999999 99999999999999999999999
Q ss_pred ccCccccCCC----------------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc
Q 009750 217 FGLMKNSRDG----------------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV 280 (527)
Q Consensus 217 FG~a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~ 280 (527)
||+|+..... .+.+||+.|||||++.+..|+.++||||||||||||++ ||.+...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~------ 232 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME------ 232 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH------
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH------
Confidence 9999865432 23479999999999999999999999999999999996 6643100
Q ss_pred cccchhhHHHHHhcCcchhhcccccCCCCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 281 PIKFNFGALDMIRGKNILHLMDSHLEGNFS---SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
... .+..+ ....+| ...++.+.+||.+||+.||++|||+.++++|-+
T Consensus 233 -------~~~-----~~~~~----~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~ 282 (299)
T 4g31_A 233 -------RVR-----TLTDV----RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAV 282 (299)
T ss_dssp -------HHH-----HHHHH----HTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred -------HHH-----HHHHH----hcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHh
Confidence 000 00111 112233 234456789999999999999999999998744
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-53 Score=427.32 Aligned_cols=267 Identities=16% Similarity=0.192 Sum_probs=204.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEe------C
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD------G 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~ 142 (527)
.+.+++.||+|+||+||+|+++. +|+.||||++++..... .+.+.+|+.+|++|+|||||++++++.. .
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~---t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRL---TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CeEEEEEEecccCeEEEEEEECC---CCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 46788899999999999999988 88999999997654322 3578999999999999999999999864 3
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
+.+|||||||+ |+|.+++. ..+.+++..+..|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+|+.
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred CEEEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeee
Confidence 57899999996 58999997 5678999999999999999999999999 99999999999999999999999999986
Q ss_pred cCC--------CCccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHH
Q 009750 223 SRD--------GKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGAL 289 (527)
Q Consensus 223 ~~~--------~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~ 289 (527)
... ..+.+||+.|||||++.+. .++.++||||+|||+|||++|++||++.+.......-. ......+
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence 432 2356899999999998875 46999999999999999999999998765321100000 0000000
Q ss_pred HHHhcCcchhhcccc-cCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 290 DMIRGKNILHLMDSH-LEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 290 ~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...........+... .....+ ...++.+.+||.+||..||.+|||+.++|+|-+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f 348 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGG
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhh
Confidence 000000000000000 000111 1235678899999999999999999999998654
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-52 Score=415.08 Aligned_cols=264 Identities=18% Similarity=0.188 Sum_probs=200.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+++.||+|+||+||+|+++....+++.||||++.... ...++.+|+++|+.+ +|||||++++++.+.+++|||||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 557889999999999999876433368899999987543 456789999999999 69999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC-CCceeecccCccccCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~~~~~~--- 226 (527)
||+||+|.+++. .+++.+++.++.||+.||.|||++| ||||||||+|||++.+ +.+||+|||+|+...+.
T Consensus 101 ~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~ 174 (361)
T 4f9c_A 101 YLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE 174 (361)
T ss_dssp CCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred CCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc
Confidence 999999999984 4899999999999999999999999 9999999999999877 79999999999754321
Q ss_pred -----------------------------CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccc
Q 009750 227 -----------------------------KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVV 276 (527)
Q Consensus 227 -----------------------------~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~ 276 (527)
.+.+||+.|||||++.+.. ++.++||||+|||+|||+||+.||...+...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~ 254 (361)
T 4f9c_A 175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL 254 (361)
T ss_dssp GGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHH
Confidence 2346899999999998764 8999999999999999999999996543221
Q ss_pred cccccccchhhHHHHH----------------hcCcchhhcc------------------cccCCCCCHHHHHHHHHHHH
Q 009750 277 WNTVPIKFNFGALDMI----------------RGKNILHLMD------------------SHLEGNFSSEEATVVFDLAS 322 (527)
Q Consensus 277 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~li~ 322 (527)
.....+....+..... .......... ...........++++.+||.
T Consensus 255 ~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~ 334 (361)
T 4f9c_A 255 TALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLD 334 (361)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHH
T ss_pred HHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHH
Confidence 1000000000000000 0000000000 00000111223567889999
Q ss_pred HhcccCCCCCCCHHHHHHHhc
Q 009750 323 RCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 323 ~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
+||+.||++|||++|+|+|-+
T Consensus 335 ~lL~~dP~~R~ta~eaL~Hp~ 355 (361)
T 4f9c_A 335 KLLDLNPASRITAEEALLHPF 355 (361)
T ss_dssp HHTCSCTTTSCCHHHHHTSGG
T ss_pred HHCcCChhHCcCHHHHhcCcc
Confidence 999999999999999999855
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-52 Score=434.23 Aligned_cols=252 Identities=18% Similarity=0.131 Sum_probs=207.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHH---HHHHhhcCCCCccceeEEEEEeC
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFAD---EAWGVGKLRHKRLANLIGYCCDG 142 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~---E~~~l~~l~H~nIv~l~~~~~~~ 142 (527)
.+++.+++.||+|+||.||+|+.+. +|+.||||++++.. ......+.+ ++.+++.++|||||+++++|.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~---tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~ 264 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP 264 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred hHHeEEEEEEecccCeEEEEEEECC---CCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC
Confidence 3457788999999999999999998 89999999997542 222333444 46777888999999999999999
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
+.+|||||||+||+|.++|. ..+.+++..++.|+.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+.
T Consensus 265 ~~lylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 265 DKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp SEEEEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999999997 3467999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCC--CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 223 SRDG--KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 223 ~~~~--~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
.... .+.+||+.|||||++.+ ..|+.++||||||||||||++|++||.+.+.... ... ...
T Consensus 342 ~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-----------~~i-----~~~ 405 (689)
T 3v5w_A 342 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----------HEI-----DRM 405 (689)
T ss_dssp CSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-----------HHH-----HHH
T ss_pred cCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-----------HHH-----HHh
Confidence 6543 46789999999999975 5799999999999999999999999965321110 000 001
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcc
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLAP 344 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~~ 344 (527)
+.. ....++...++.+.+||.+||+.||.+|++ +++|++|-+.
T Consensus 406 i~~--~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF 453 (689)
T 3v5w_A 406 TLT--MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453 (689)
T ss_dssp HHH--CCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGG
T ss_pred hcC--CCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccc
Confidence 111 112345556778999999999999999998 6899888654
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-52 Score=435.00 Aligned_cols=252 Identities=18% Similarity=0.153 Sum_probs=211.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||+|+||+||+|+++. +|+.||||++......+.+.+.+|+.+|+.|+|||||+++++|.+...+|||||
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~~~---tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTERA---TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccEEEEEEeeccCeEEEEEEECC---CCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 45678899999999999999988 889999999977654456679999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC--CCceeecccCccccCCCC-
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN--GDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~--~~~kl~DFG~a~~~~~~~- 227 (527)
||+||+|.++|.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 235 ~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 235 FMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred ecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999999963 3467999999999999999999999999 9999999999999854 899999999999876543
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
..+||+.|||||++.+..|+.++|||||||+||||++|+.||.+.+... ....+.... ...
T Consensus 313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~-----------~~~~i~~~~------~~~ 375 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-----------TLRNVKSCD------WNM 375 (573)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-----------HHHHHHTTC------CCC
T ss_pred eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-----------HHHHHHhCC------CCC
Confidence 4579999999999999999999999999999999999999997653211 011110000 001
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
........+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 376 ~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~ 414 (573)
T 3uto_A 376 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414 (573)
T ss_dssp CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCc
Confidence 111122346678999999999999999999999998653
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-49 Score=386.82 Aligned_cols=279 Identities=27% Similarity=0.439 Sum_probs=227.0
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeE
Q 009750 57 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLI 136 (527)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~ 136 (527)
+++.++...+++|. +...||+|+||.||+|.+. +++.||||++........+.+.+|+.+++.++||||++++
T Consensus 29 ~~~~~~~~~~~~y~---~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 101 (321)
T 2qkw_B 29 VPLVDLEEATNNFD---HKFLIGHGVFGKVYKGVLR----DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLI 101 (321)
T ss_dssp -CCSCCCCCCCCCS---CCCCSCBCSSSEEEEEECT----TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEE
T ss_pred ecHHHHHHHHhccC---ccceeecCCCeeEEEEEEC----CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 33444444555555 6677899999999999975 6788999998876655567899999999999999999999
Q ss_pred EEEEeCCeeeEEEEecCCCCHhHHhhhcC--CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCcee
Q 009750 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRL 214 (527)
Q Consensus 137 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl 214 (527)
+++...+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||
T Consensus 102 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl 180 (321)
T 2qkw_B 102 GFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKI 180 (321)
T ss_dssp EECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEE
T ss_pred EEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEE
Confidence 99999999999999999999999996432 235899999999999999999999999 999999999999999999999
Q ss_pred ecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhH
Q 009750 215 SCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGA 288 (527)
Q Consensus 215 ~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 288 (527)
+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||......... ....+.
T Consensus 181 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~----~~~~~~ 256 (321)
T 2qkw_B 181 TDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV----NLAEWA 256 (321)
T ss_dssp CCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCC----CHHHHT
T ss_pred eecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHH----HHHHHh
Confidence 999999764322 2335789999999998889999999999999999999999998764322111 001111
Q ss_pred HHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 289 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
........+..+++.......+...+..+.+++.+||+.||++|||+.+++++|+.+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp HHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 12223334445555555566778889999999999999999999999999999997653
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=380.21 Aligned_cols=250 Identities=16% Similarity=0.243 Sum_probs=211.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++........+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 21 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 21 KYTRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp TBCCCEEEEEETTEEEEEEEBTT---TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceeeeeeeccCCCeEEEEEEECC---CCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 45678889999999999999887 889999999987766667889999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+++|+|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 98 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 173 (297)
T 3fxz_A 98 YLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (297)
T ss_dssp CCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc
Confidence 9999999999964 36899999999999999999999999 999999999999999999999999998765433
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
....||+.|+|||++.+..++.++|||||||++|||+||+.||...+.... ...... .....
T Consensus 174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----------~~~~~~--------~~~~~ 235 (297)
T 3fxz_A 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----------LYLIAT--------NGTPE 235 (297)
T ss_dssp CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------HHHHHH--------HCSCC
T ss_pred CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----------HHHHHh--------CCCCC
Confidence 345789999999999999999999999999999999999999965432110 000000 00111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...+...+..+.+|+.+||+.||.+|||+.++++|-+.-
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 274 (297)
T 3fxz_A 236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274 (297)
T ss_dssp CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhc
Confidence 122344567789999999999999999999999986543
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-48 Score=380.09 Aligned_cols=284 Identities=29% Similarity=0.439 Sum_probs=230.6
Q ss_pred cccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCc
Q 009750 53 AFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKR 131 (527)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~n 131 (527)
....|++.++...+++|. +++.||+|+||.||+|.+. +++.||||++...... ....+.+|+.+++.++|||
T Consensus 16 ~~~~~~~~~~~~~~~~y~---~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~ 88 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFS---NKNILGRGGFGKVYKGRLA----DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 88 (326)
T ss_dssp CCEECCTHHHHTTTTSSC---STTEEECCSSSEEEEECCS----SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTT
T ss_pred ccceecHHHHHHHhhccc---cceeEecCCCcEEEEEEec----CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCC
Confidence 456789999998888887 5666799999999999865 6778999999865432 2347999999999999999
Q ss_pred cceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcC--CCCcCHHHHHHHHHHHHHHHHHhhhC---CCccccccCCCceEe
Q 009750 132 LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSE---GRPLYHDLNAYRVLF 206 (527)
Q Consensus 132 Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~aL~~lH~~---~~ivH~Dlkp~NIll 206 (527)
|+++++++......++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. + |+||||||+|||+
T Consensus 89 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~ 167 (326)
T 3uim_A 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILL 167 (326)
T ss_dssp BCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEE
T ss_pred ccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEE
Confidence 9999999999999999999999999999997532 33599999999999999999999999 8 9999999999999
Q ss_pred CCCCCceeecccCccccCCC-----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc
Q 009750 207 DENGDPRLSCFGLMKNSRDG-----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP 281 (527)
Q Consensus 207 ~~~~~~kl~DFG~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~ 281 (527)
+.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||........ ..
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~ 245 (326)
T 3uim_A 168 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND--DD 245 (326)
T ss_dssp CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTT--SC
T ss_pred CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccc--cc
Confidence 99999999999999865432 234589999999999888899999999999999999999999852211000 00
Q ss_pred ccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 282 IKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.....+............+.+......++...+..+.+|+.+||+.||.+|||+.+++++|+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp SBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 00111111222334445555556666778888999999999999999999999999999998643
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=379.98 Aligned_cols=254 Identities=21% Similarity=0.290 Sum_probs=211.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+.+.||+|+||+||+|.+.. +++.||||++........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~lG~G~~g~V~~~~~~~---~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 11 DLIHGEVLGKGCFGQAIKVTHRE---TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GEEEEEEEECCSSEEEEEEEETT---TCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HeeccceecCCCCEEEEEEEECC---CCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 45567789999999999999987 789999999866544445679999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 88 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 88 YIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CCTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999975 3567999999999999999999999999 9999999999999999999999999997653321
Q ss_pred ---------------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHH
Q 009750 228 ---------------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 228 ---------------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
...||+.|+|||++.+..++.++|||||||++|||++|..|++.........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~------------- 232 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF------------- 232 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-------------
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-------------
Confidence 3468999999999999999999999999999999999999886532211100
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.......... ..+..++..+.+|+.+||+.||++|||+.++++.|+.+..
T Consensus 233 -~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 233 -GLNVRGFLDR----YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp -SBCHHHHHHH----TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -hhhhhccccc----cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0001111111 1223344568899999999999999999999999998763
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-47 Score=374.27 Aligned_cols=267 Identities=19% Similarity=0.251 Sum_probs=220.6
Q ss_pred cccCHHHHHHHhcCCCc-------ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC
Q 009750 55 AEFSLADLRAATNNFSS-------DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL 127 (527)
Q Consensus 55 ~~~~~~~~~~~~~~~~~-------~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l 127 (527)
+.++.+++..+++..-. ......||+|+||.||+|++.. +|+.||||++........+.+.+|+.+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKH---SGRQVAVKMMDLRKQQRRELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCSHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECC---CCcEEEEEEEeccchhHHHHHHHHHHHHHhC
Confidence 56889999988876432 2344578999999999999987 7899999999877666677899999999999
Q ss_pred CCCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC
Q 009750 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (527)
Q Consensus 128 ~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~ 207 (527)
+||||+++++++...+..++||||+++++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~ 175 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLT 175 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEC
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEC
Confidence 99999999999999999999999999999999984 457999999999999999999999999 99999999999999
Q ss_pred CCCCceeecccCccccCCC----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc
Q 009750 208 ENGDPRLSCFGLMKNSRDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 208 ~~~~~kl~DFG~a~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~ 283 (527)
.++.+||+|||++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...+...
T Consensus 176 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~------- 248 (321)
T 2c30_A 176 LDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ------- 248 (321)
T ss_dssp TTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-------
T ss_pred CCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------
Confidence 9999999999998765432 34578999999999999999999999999999999999999986543110
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
......... .. ....+...+..+.+|+.+||+.||++|||+.++++|.+..+
T Consensus 249 ----~~~~~~~~~-----~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~ 300 (321)
T 2c30_A 249 ----AMKRLRDSP-----PP--KLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300 (321)
T ss_dssp ----HHHHHHHSS-----CC--CCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred ----HHHHHhcCC-----CC--CcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence 111111000 00 00112234567899999999999999999999999877654
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-48 Score=381.01 Aligned_cols=257 Identities=22% Similarity=0.277 Sum_probs=211.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||+|+||.||+|.+......+..||||+++..... ..+.|.+|+.++++++||||+++++++.+.+..+|||
T Consensus 50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 129 (325)
T 3kul_A 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVT 129 (325)
T ss_dssp GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEE
T ss_pred HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEe
Confidence 455778899999999999999865446677999999765322 2457999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 130 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 207 (325)
T 3kul_A 130 EYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207 (325)
T ss_dssp ECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred eCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence 99999999999964 3467999999999999999999999999 9999999999999999999999999998754432
Q ss_pred -----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 228 -----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||....... ....+
T Consensus 208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------------------~~~~~ 267 (325)
T 3kul_A 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--------------------VISSV 267 (325)
T ss_dssp CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--------------------HHHHH
T ss_pred eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--------------------HHHHH
Confidence 1234678999999998899999999999999999999 999986542110 11111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
........+..++..+.+|+.+||+.||.+|||+.++++.|+.+...+
T Consensus 268 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 268 EEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 111222334455677999999999999999999999999999887543
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-48 Score=381.66 Aligned_cols=249 Identities=18% Similarity=0.225 Sum_probs=209.4
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+..+.+++.||+|+||.||+|.+.. +|+.||||++...... ..+.+.+|+.+|+.++||||+++++++...+..+
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHIL---TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 3456688899999999999999987 8899999999765432 2456889999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++|+|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EEECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEEECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 99999999999999974 457999999999999999999999999 999999999999999999999999999765433
Q ss_pred ---CccccCCccCCcccccCCcCC-CCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ---KSYSTNLAYTPPEYLRNGRVT-PESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~~-~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....||+.|+|||++.+..++ .++|||||||++|||++|+.||.+.+... ... .+..
T Consensus 168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----------~~~--------~i~~ 228 (328)
T 3fe3_A 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE-----------LRE--------RVLR 228 (328)
T ss_dssp CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHH--------HHHH
T ss_pred CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH-----------HHH--------HHHh
Confidence 345789999999999888765 78999999999999999999997643111 001 1111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
. ....|...+..+.+|+.+||..||.+|||+.++++|-+.
T Consensus 229 ~--~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~ 268 (328)
T 3fe3_A 229 G--KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWI 268 (328)
T ss_dssp C--CCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTT
T ss_pred C--CCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhh
Confidence 1 112334456778999999999999999999999998654
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-48 Score=389.68 Aligned_cols=256 Identities=23% Similarity=0.295 Sum_probs=200.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+.+.||+|+||.||+|++.....++..||||+++..... ..+.|.+|+.++++++||||+++++++.+....+||||
T Consensus 47 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 126 (373)
T 2qol_A 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126 (373)
T ss_dssp CCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred ceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEe
Confidence 44667889999999999998744446788999999765322 24579999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 127 ~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 204 (373)
T 2qol_A 127 YMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204 (373)
T ss_dssp CCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred CCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCccc
Confidence 9999999999974 3457999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 228 ----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||...+... ....+.
T Consensus 205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--------------------~~~~i~ 264 (373)
T 2qol_A 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------------------VIKAVD 264 (373)
T ss_dssp ---------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--------------------HHHHHH
T ss_pred eeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------------------HHHHHH
Confidence 1134678999999998899999999999999999998 999986532110 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
.......+..++..+.+|+.+||+.||.+||++.++++.|+.+...+
T Consensus 265 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp TTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred cCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 11222234455677999999999999999999999999999886543
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=378.69 Aligned_cols=248 Identities=20% Similarity=0.233 Sum_probs=210.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC---CCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH---AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||.||+|+.+. +++.||||++++. .....+.+.+|+.+|+.++||||+++++++...+.++
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 81 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence 355678899999999999999987 8899999999754 2334567999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC-
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~- 225 (527)
|||||++||+|..++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++....
T Consensus 82 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 82 FVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999999999999973 457899999999999999999999999 99999999999999999999999999986332
Q ss_pred ---CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 ---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ... .+..
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----------~~~--------~i~~ 219 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----------LFE--------LILM 219 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHH--------HHHH
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH-----------HHH--------HHHc
Confidence 235678999999999999999999999999999999999999996543110 000 1111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
. ...++...+..+.+||.+||+.||.+|| ++.++++|-..
T Consensus 220 ~--~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f 264 (337)
T 1o6l_A 220 E--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264 (337)
T ss_dssp C--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred C--CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence 1 1123445567789999999999999999 89999998654
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-48 Score=385.97 Aligned_cols=255 Identities=20% Similarity=0.296 Sum_probs=209.9
Q ss_pred cccccccCCCCCCCeEEEEEecC----CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD----GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
.+.+++.||+|+||.||+|.+.. ...++..||||+++..... ..+.+.+|+.+|+++ +||||++++++|.+.+.
T Consensus 82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~ 161 (370)
T 2psq_A 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 161 (370)
T ss_dssp GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS
T ss_pred HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC
Confidence 45577789999999999998743 1225678999999765321 245799999999999 89999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
+++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++
T Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENN 240 (370)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTC
T ss_pred EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCCC
Confidence 999999999999999997532 235899999999999999999999999 99999999999999999
Q ss_pred CceeecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCcccccccccc
Q 009750 211 DPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 283 (527)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.+...
T Consensus 241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~------- 313 (370)
T 2psq_A 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 313 (370)
T ss_dssp CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-------
T ss_pred CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 9999999999865432 22345788999999999999999999999999999999 999987543111
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
+...+........+..++..+.+||.+||+.||.+|||+.+++++|+.+.
T Consensus 314 -------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 314 -------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp -------------HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------------HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111112223344556678999999999999999999999999998864
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=374.06 Aligned_cols=255 Identities=19% Similarity=0.269 Sum_probs=203.4
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+..+.+++.||+|+||+||+|++ +++.||||++....... .+.+.+|+.++++++||||+++++++......+
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-----HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-----CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 44566888999999999999987 46779999997654332 347899999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcC-CCCcCHHHHHHHHHHHHHHHHHhhhCC-CccccccCCCceEeCCCCCceeecccCccccC
Q 009750 147 LVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+++...
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 9999999999999997321 123899999999999999999999986 49999999999999999999999999997644
Q ss_pred CC----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 225 DG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 225 ~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... .. ..+
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~-----------~~--------~~~ 251 (309)
T 3p86_A 191 STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ-----------VV--------AAV 251 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH-----------HH--------HHH
T ss_pred ccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HH--------HHH
Confidence 32 34578999999999999999999999999999999999999986542110 00 001
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.........+...++.+.+||.+||+.||.+|||+.++++.|+.+..
T Consensus 252 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 252 GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp HHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 01112223445566779999999999999999999999999998865
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-47 Score=379.28 Aligned_cols=246 Identities=17% Similarity=0.182 Sum_probs=207.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC------ChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
+.+++.||+|+||.||+|.++. +|+.||||++++.... ..+.+.+|+.+|++++||||+++++++.+...+
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred eEEeeEEeeCcCEEEEEEEECC---CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 4577889999999999999987 8899999999865432 246799999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC----CceeecccCcc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLMK 221 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~----~~kl~DFG~a~ 221 (527)
+|||||++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 91 ~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 91 VLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999999996 4567999999999999999999999999 99999999999998877 79999999998
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
..... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+... ...
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~-----------~~~-------- 228 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-----------TLA-------- 228 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-----------HHH--------
T ss_pred EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHH--------
Confidence 76543 35678999999999998899999999999999999999999997643111 000
Q ss_pred hhcccccCCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 299 HLMDSHLEGNFSS----EEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 299 ~~~~~~~~~~~~~----~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.+... ...++. ..+..+.+||.+||..||.+|||+.++++|-+.
T Consensus 229 ~i~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 276 (361)
T 2yab_A 229 NITAV--SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276 (361)
T ss_dssp HHHTT--CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred HHHhc--CCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCc
Confidence 11110 011221 235678999999999999999999999988553
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-47 Score=372.87 Aligned_cols=248 Identities=21% Similarity=0.248 Sum_probs=211.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||.||+|+... +++.||||++++.. ....+.+.+|+.+++.++||||+++++++.+...++
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 82 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRH---NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF 82 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEE
Confidence 456688899999999999999987 88999999997542 234567899999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||++||+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++.....
T Consensus 83 lv~e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 83 MIMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp EEECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred EEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 9999999999999997 3467999999999999999999999999 999999999999999999999999999876543
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
.+.+||+.|+|||++.+..++.++|||||||++|||++|+.||...+... . ...+....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----------~--------~~~i~~~~- 219 (318)
T 1fot_A 160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-----------T--------YEKILNAE- 219 (318)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------H--------HHHHHHCC-
T ss_pred cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-----------H--------HHHHHhCC-
Confidence 45678999999999999999999999999999999999999996543110 0 11111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
..++...+..+.+|+.+||..||++|| +++++++|-+.
T Consensus 220 -~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f 262 (318)
T 1fot_A 220 -LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262 (318)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred -CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccc
Confidence 123444567789999999999999999 89999988654
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=375.86 Aligned_cols=253 Identities=19% Similarity=0.147 Sum_probs=206.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
+..+.+++.||+|+||+||+|.+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECC---CCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3456788899999999999999987 7889999998754332 24679999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC--
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-- 225 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~-- 225 (527)
||||+++|+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 83 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 83 FLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp EEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EEEcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 999999999999996 4567999999999999999999999999 99999999999999999999999999975432
Q ss_pred ----CCccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 226 ----GKSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
.....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...+.... .....
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----------~~~~~-------- 221 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ----------EYSDW-------- 221 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH----------HHHHH--------
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH----------HHHHH--------
Confidence 134578999999999987775 7789999999999999999999965432111 00000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.............+..+.+|+.+||+.||.+|||+.+++++.+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~ 266 (323)
T 3tki_A 222 KEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266 (323)
T ss_dssp HTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred hcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhc
Confidence 000111111233456788999999999999999999999987653
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=383.20 Aligned_cols=258 Identities=17% Similarity=0.200 Sum_probs=209.0
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
+..+.+++.||+|+||.||+|+++. +++.||||++++.... ..+.+.+|+.++.++ +|||||++++++.+...
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~---~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 127 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKK---TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence 3456688899999999999999987 8899999999865332 235688999999887 89999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
++|||||++||+|..++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++...
T Consensus 128 ~~lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 9999999999999999974 467999999999999999999999999 9999999999999999999999999997532
Q ss_pred ----CCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 225 ----DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 225 ----~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
...+.+||+.|+|||++.+..++.++|||||||++|||++|+.||............. . ......+
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~--~--------~~~~~~i 274 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT--E--------DYLFQVI 274 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CC--H--------HHHHHHH
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhh--H--------HHHHHHH
Confidence 2245689999999999999999999999999999999999999996532211100000 0 0000111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHHhcc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT------KDLVSTLAP 344 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~------~~vl~~L~~ 344 (527)
... ...++...+..+.+||.+||+.||.+||++ .++++|-+.
T Consensus 275 ~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff 322 (396)
T 4dc2_A 275 LEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322 (396)
T ss_dssp HHC--CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred hcc--ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence 111 123455566789999999999999999985 688887553
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=362.14 Aligned_cols=280 Identities=30% Similarity=0.481 Sum_probs=226.5
Q ss_pred cccccCHHHHHHHhcCCCcccc---cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC----CChHHHHHHHHHhh
Q 009750 53 AFAEFSLADLRAATNNFSSDFI---VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVG 125 (527)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~---~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~E~~~l~ 125 (527)
....|++.++..++++|+...+ ...||+|+||.||+|.. +++.||||++..... ...+.+.+|+.+++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~ 85 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMA 85 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-----SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-----CCceEEEEEEecccCcchHHHHHHHHHHHHHHH
Confidence 4578999999999999987633 25689999999999987 457799999875432 12457999999999
Q ss_pred cCCCCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhc-CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCce
Q 009750 126 KLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW-ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204 (527)
Q Consensus 126 ~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NI 204 (527)
+++||||+++++++.+.+..++||||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||
T Consensus 86 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Ni 164 (307)
T 2nru_A 86 KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANI 164 (307)
T ss_dssp HCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGE
T ss_pred hcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHE
Confidence 999999999999999999999999999999999999643 2456999999999999999999999999 99999999999
Q ss_pred EeCCCCCceeecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccc
Q 009750 205 LFDENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWN 278 (527)
Q Consensus 205 ll~~~~~~kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~ 278 (527)
|++.++.+||+|||++...... ....+|+.|+|||++.+ .++.++|||||||++|+|++|..||.........
T Consensus 165 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 243 (307)
T 2nru_A 165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243 (307)
T ss_dssp EECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT
T ss_pred EEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH
Confidence 9999999999999998765432 23468999999998864 5889999999999999999999998764322110
Q ss_pred cccccchhhHHHHH--hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 279 TVPIKFNFGALDMI--RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 279 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
....... ....+...++... ...+...+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 244 -------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 -------LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp -------THHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred -------HHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 0011111 1112223333222 34567788899999999999999999999999999998753
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-47 Score=378.93 Aligned_cols=251 Identities=18% Similarity=0.194 Sum_probs=209.0
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
+..+.+++.||+|+||.||+|.+.. +++.||||++.+.. ....+.+.+|+.+|+.++|||||+++++|.+....
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 90 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKND---TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM 90 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4566788999999999999999987 88999999987532 23456899999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++||||++||+|..++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++....
T Consensus 91 ~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 91 FMVVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp EEEECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999999997 4567999999999999999999999999 99999999999999999999999999987543
Q ss_pred C---CccccCCccCCcccccC---CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 226 G---KSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
. ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .... .
T Consensus 168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--------~~~~--------~ 231 (384)
T 4fr4_A 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK--------EIVH--------T 231 (384)
T ss_dssp TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH--------HHHH--------H
T ss_pred CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH--------HHHH--------H
Confidence 3 45678999999999974 45899999999999999999999999654221100 0000 0
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHhc
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN-TKDLVSTLA 343 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-~~~vl~~L~ 343 (527)
+. .....++...+..+.+||.+||+.||.+||+ +.++++|-+
T Consensus 232 ~~--~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~ 274 (384)
T 4fr4_A 232 FE--TTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPY 274 (384)
T ss_dssp HH--HCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGG
T ss_pred Hh--hcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChh
Confidence 00 0112244455678999999999999999998 788877644
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=381.55 Aligned_cols=249 Identities=18% Similarity=0.208 Sum_probs=206.9
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
+..+.+++.||+|+||.||+|+++. +++.||||++++.. ....+.+.+|+.++..+ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 98 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKE---TGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR 98 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcC---CCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence 3456688899999999999999987 88999999997542 23456788999999998 79999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
++|||||++||+|..++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++...
T Consensus 99 ~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 99 LFFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 9999999999999999974 467999999999999999999999999 9999999999999999999999999998633
Q ss_pred C----CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 225 D----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 225 ~----~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
. ..+.+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+... . ...+
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-----------~--------~~~i 236 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-----------L--------FEAI 236 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------H--------HHHH
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-----------H--------HHHH
Confidence 2 235678999999999998889999999999999999999999997643211 0 1111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHHhcc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT------KDLVSTLAP 344 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~------~~vl~~L~~ 344 (527)
... ...++...+..+.+||.+||+.||.+||++ .++++|-+.
T Consensus 237 ~~~--~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f 284 (353)
T 3txo_A 237 LND--EVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284 (353)
T ss_dssp HHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGG
T ss_pred HcC--CCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcc
Confidence 111 112344456778999999999999999998 889887653
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=383.67 Aligned_cols=258 Identities=22% Similarity=0.327 Sum_probs=208.6
Q ss_pred cccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+++.||+|+||+||+|.+.. ...+++.||||+++..... ....+.+|+.++++++|||||++++++......+|
T Consensus 72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 151 (367)
T 3l9p_A 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 151 (367)
T ss_dssp GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEE
Confidence 35578889999999999999653 1226788999999754322 24468999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcC-----CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC---CceeecccC
Q 009750 148 VAEYMPNDTLAKHLFHWE-----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGL 219 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~---~~kl~DFG~ 219 (527)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 999999999999997532 245899999999999999999999999 99999999999999555 599999999
Q ss_pred cccc------CCCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHH
Q 009750 220 MKNS------RDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 220 a~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
++.. .......+|+.|+|||++.+..++.++|||||||++|||+| |..||...+...
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~---------------- 294 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---------------- 294 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH----------------
T ss_pred ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----------------
Confidence 9743 22334567899999999998899999999999999999998 989986543110
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
....+........+..++..+.+|+.+||+.||.+|||+.+++++|+.+...+
T Consensus 295 ----~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 295 ----VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp ----HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ----HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 11111111122234445667899999999999999999999999999886543
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-47 Score=363.04 Aligned_cols=251 Identities=24% Similarity=0.325 Sum_probs=209.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+.+++.||+|+||+||+|.+. +++.||||++.... ...+++.+|+.++++++||||+++++++.+....++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET----TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhceeeheecCCCccEEEEEEec----CCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 35667889999999999999987 55679999998654 34578999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 85 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 85 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp ECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred EeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 99999999999964 4456899999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
....+|+.|+|||++.+..++.++|||||||++|+|++ |+.||...+... ... .+..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-----------~~~---------~~~~ 222 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-----------VVE---------DIST 222 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----------HHH---------HHHT
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-----------HHH---------HHhc
Confidence 23455778999999998899999999999999999999 888886542110 001 1111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
......+...+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 223 GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 11222333446678999999999999999999999999988753
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=366.66 Aligned_cols=256 Identities=17% Similarity=0.238 Sum_probs=206.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++++++||||+++++++...+..++
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 12 RYKIVDKLGGGGMSTVYLAEDTI---LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECC---CCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 35678899999999999999987 78899999986554333 3578999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 v~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999999974 457999999999999999999999999 999999999999999999999999999765432
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+...... ...... ...... .
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~----------~~~~~~-~~~~~~-~ 233 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI----------AIKHIQ-DSVPNV-T 233 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH----------HHHHHS-SCCCCH-H
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH----------HHHHhh-ccCCCc-c
Confidence 234689999999999999999999999999999999999999976432110 001010 000000 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHhccccCC
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERP-NTKDLVSTLAPLQNR 348 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-t~~~vl~~L~~~~~~ 348 (527)
. ..+...+..+.+++.+||+.||.+|| ++.++.+.|+.+...
T Consensus 234 ~----~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 234 T----DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp H----HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred h----hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 0 11223456788999999999999998 899999999887643
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=386.65 Aligned_cols=251 Identities=24% Similarity=0.356 Sum_probs=208.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+.+.||+|+||.||+|.+.. +++.||||+++..... ..+.|.+|+.+|++++|||||++++++...+..+|||
T Consensus 115 ~~~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 115 DLVLGEQIGRGNFGEVFSGRLRA---DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GEEEEEEEEEETTEEEEEEEETT---TCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HeEEeeEeccCCCCeEEEEEEec---CCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 34567789999999999999987 7889999998754321 1346899999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 192 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 192 ELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp ECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999974 3346899999999999999999999999 9999999999999999999999999998654331
Q ss_pred ----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 228 ----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
...+++.|+|||++.+..++.++|||||||++|||+| |..||+..+.. .....+.
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--------------------~~~~~~~ 329 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--------------------QTREFVE 329 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--------------------HHHHHHH
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------------------HHHHHHH
Confidence 1234678999999998899999999999999999998 89888654211 0111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.......+..++..+.+||.+||+.||.+|||+.++++.|+.+.
T Consensus 330 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 330 KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 22223344455677899999999999999999999999998765
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=371.55 Aligned_cols=246 Identities=18% Similarity=0.167 Sum_probs=206.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC------ChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
+.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+|++++||||+++++++.+....
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREKS---TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEETT---TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred eEeceEEeeCCCeEEEEEEECC---CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4567789999999999999987 7899999999765432 356799999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC----CceeecccCcc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLMK 221 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~----~~kl~DFG~a~ 221 (527)
++||||+++|+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 90 ~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 90 ILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999999996 4567999999999999999999999999 99999999999999887 89999999998
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
..... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||.+..... ........
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----------~~~~~~~~--- 232 (326)
T 2y0a_A 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-----------TLANVSAV--- 232 (326)
T ss_dssp ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-----------HHHHHHHT---
T ss_pred ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-----------HHHHHHhc---
Confidence 75432 34578999999999998899999999999999999999999996543111 00000000
Q ss_pred hhcccccCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 299 HLMDSHLEGNFS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 299 ~~~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...++ ...+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 233 -------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~ 275 (326)
T 2y0a_A 233 -------NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275 (326)
T ss_dssp -------CCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTT
T ss_pred -------CCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCc
Confidence 01111 1234678899999999999999999999998653
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=392.32 Aligned_cols=252 Identities=21% Similarity=0.350 Sum_probs=214.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+.+.||+|+||.||+|.+.. ++..||||+++... ...+.|.+|+.+|++++|||||+++++|.....++||||
T Consensus 221 ~~~~~~~lG~G~fg~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 221 DITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp GEEEEEESGGGTTSSEEEEEEGG---GTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HceeeeEecCCCCeEEEEEEEcC---CCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 34567789999999999999986 68899999997654 346789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 999999999998655667999999999999999999999999 9999999999999999999999999998754332
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...+++.|+|||++.+..++.++|||||||+||||+| |..||.+.+.. .+...+...
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--------------------~~~~~~~~~ 435 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------------QVYELLEKD 435 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------------------GHHHHHHTT
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--------------------HHHHHHHcC
Confidence 2234678999999998899999999999999999999 88898764321 111112222
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.+...+..++..+.+||.+||+.||.+|||+.++++.|+.+..
T Consensus 436 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 436 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 2333455566789999999999999999999999999998754
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-47 Score=375.37 Aligned_cols=253 Identities=19% Similarity=0.298 Sum_probs=204.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCce----EEEEEEcCcCC-CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRR----WIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~----~vAiK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
.+.+++.||+|+||+||+|.+.. +++ .||+|++.... ....+.+.+|+.++++++||||+++++++. .+..
T Consensus 14 ~y~~~~~lG~G~~g~Vy~~~~~~---~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 14 ELRKLKVLGSGVFGTVHKGVWIP---EGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TEEEEEEEECCSSCEEEEEEECC---TTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred HceeeeeeeecCCceEEEEEEcC---CCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 45678899999999999999876 444 38888876443 233467889999999999999999999986 5678
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++||||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 90 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999999974 3457899999999999999999999999 99999999999999999999999999987543
Q ss_pred C------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 226 G------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 226 ~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
. ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+..... ..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------------------~~ 227 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--------------------VP 227 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--------------------HH
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--------------------HH
Confidence 3 23356789999999998899999999999999999999 999987542111 11
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
..+........+..++..+.+|+.+||+.||.+|||+.+++++|+.+...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 228 DLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp HHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred HHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 111111122233334556889999999999999999999999999886543
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=367.38 Aligned_cols=249 Identities=17% Similarity=0.184 Sum_probs=199.4
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--------------------------ChHHHHHHHH
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------------------------DPKQFADEAW 122 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--------------------------~~~~~~~E~~ 122 (527)
+..+.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 88 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNEN---DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA 88 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETT---TTEEEEEEEEECC-------------------------------CHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECC---CCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHH
Confidence 3456688899999999999999987 8899999999754321 1356899999
Q ss_pred HhhcCCCCccceeEEEEEe--CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccC
Q 009750 123 GVGKLRHKRLANLIGYCCD--GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN 200 (527)
Q Consensus 123 ~l~~l~H~nIv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlk 200 (527)
+|++++||||+++++++.+ ....+|||||+++++|.+++ ....+++..++.++.||+.||.|||+.+ |+|||||
T Consensus 89 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlk 164 (298)
T 2zv2_A 89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIK 164 (298)
T ss_dssp HHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCC
T ss_pred HHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCC
Confidence 9999999999999999987 56899999999999998876 4457999999999999999999999999 9999999
Q ss_pred CCceEeCCCCCceeecccCccccCCC----CccccCCccCCcccccCCc---CCCCcccchhhHHHHHHHhCCCCCCCCC
Q 009750 201 AYRVLFDENGDPRLSCFGLMKNSRDG----KSYSTNLAYTPPEYLRNGR---VTPESVIFSFGTVLLDLLSGKHIPPSHD 273 (527)
Q Consensus 201 p~NIll~~~~~~kl~DFG~a~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~p~~~~~ 273 (527)
|+|||++.++.+||+|||+++..... ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||...+
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999999875543 2457899999999997765 4778999999999999999999986542
Q ss_pred ccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 274 MVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
... ...... ............+..+.+||.+||+.||.+|||+.++++|-+
T Consensus 245 ~~~-----------~~~~~~--------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~ 295 (298)
T 2zv2_A 245 IMC-----------LHSKIK--------SQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295 (298)
T ss_dssp HHH-----------HHHHHH--------HCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred HHH-----------HHHHHh--------cccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence 110 001111 111111111234567899999999999999999999988743
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=386.85 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=209.5
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCC-eeeE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD-ERLL 147 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~l 147 (527)
...+.+++.||+|+||.||+|.+. ++.||||+++... ..+.|.+|+.+|++++|||||++++++.... ..+|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-----~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-----TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-----CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 345567888999999999999884 5689999998654 4578999999999999999999999987765 7899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+++|+|.+++.......+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 265 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 343 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343 (450)
T ss_dssp EEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence 999999999999998655556899999999999999999999999 999999999999999999999999999865433
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....+++.|+|||++.+..++.++|||||||+||||+| |+.||+..+... ....+....
T Consensus 344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--------------------~~~~i~~~~ 403 (450)
T 1k9a_A 344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------------VVPRVEKGY 403 (450)
T ss_dssp ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--------------------HHHHHHTTC
T ss_pred cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------------------HHHHHHcCC
Confidence 23356789999999999999999999999999999998 999987543111 111111222
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+...+..+++.+.+||.+||+.||.+|||+.++++.|+.+..
T Consensus 404 ~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 404 KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 233455567789999999999999999999999999988754
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-47 Score=372.01 Aligned_cols=249 Identities=16% Similarity=0.198 Sum_probs=208.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+.+++.||+|+||.||+|.+.. +++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETS---SKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hceEeeeEEecCCCeEEEEEEECC---CCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 456678889999999999999987 88999999987542 23456899999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC--CCCceeecccCccccCCCC
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE--NGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~--~~~~kl~DFG~a~~~~~~~ 227 (527)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 81 EFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred EeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 99999999999963 3457999999999999999999999999 999999999999987 7899999999998765543
Q ss_pred ---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...+|+.|+|||++.+..++.++|||||||++|+|++|..||.+..... ... .+....
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----------~~~--------~i~~~~ 219 (321)
T 1tki_A 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-----------IIE--------NIMNAE 219 (321)
T ss_dssp EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------HHH--------HHHHTC
T ss_pred ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-----------HHH--------HHHcCC
Confidence 3468999999999998889999999999999999999999997543111 001 111111
Q ss_pred cCCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 305 LEGNFSS----EEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 305 ~~~~~~~----~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
. .++. ..+..+.+|+.+||..||.+|||+.++++|-+..
T Consensus 220 ~--~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 262 (321)
T 1tki_A 220 Y--TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262 (321)
T ss_dssp C--CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred C--CCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhc
Confidence 1 1111 2356789999999999999999999999987653
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=374.55 Aligned_cols=256 Identities=18% Similarity=0.127 Sum_probs=200.0
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
...+.+++.||+|+||+||++++.. +++.||||++..... ..+.+.+|+.+++.++||||+++++++......++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKL---TKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETT---TCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECC---CCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 3456788899999999999999987 889999999976543 346799999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC--ceeecccCccccCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD--PRLSCFGLMKNSRD- 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~--~kl~DFG~a~~~~~- 225 (527)
|||+++|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 95 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 95 MEYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred EEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 999999999999973 456999999999999999999999999 999999999999987765 99999999874332
Q ss_pred --CCccccCCccCCcccccCCcCCCC-cccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 --GKSYSTNLAYTPPEYLRNGRVTPE-SVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~~~~~~-~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.+...... ... .+..+..
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----------~~~-----~~~~~~~ 236 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD----------YRK-----TIQRILS 236 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC----------HHH-----HHHHHHT
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH----------HHH-----HHHHHhc
Confidence 245678999999999988887655 8999999999999999999975432110 000 0011111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
...........+..+.+||.+||+.||.+|||+.++++|-+...
T Consensus 237 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 237 VKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp TCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred CCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence 11111111234567889999999999999999999999976543
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=374.53 Aligned_cols=249 Identities=16% Similarity=0.143 Sum_probs=211.6
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
...+.+++.||+|+||.||+|++.. +++.||||++.+.. ....+.+.+|+.+|+.++||||+++++++.+...+
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 116 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKE---SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNL 116 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECC---CCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 3456678899999999999999987 78999999987542 23456799999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
+|||||+++|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 117 ~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 117 YMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EEEEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccC
Confidence 999999999999999974 356999999999999999999999999 99999999999999999999999999987654
Q ss_pred C-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 226 G-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 226 ~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+... .. ..+...
T Consensus 194 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----------~~--------~~i~~~- 253 (350)
T 1rdq_E 194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-----------IY--------EKIVSG- 253 (350)
T ss_dssp CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HH--------HHHHHC-
T ss_pred CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH-----------HH--------HHHHcC-
Confidence 3 45678999999999999999999999999999999999999997543110 01 111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLAP 344 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~~ 344 (527)
...++...+..+.+||.+||+.||.+||+ +.++++|-+.
T Consensus 254 -~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f 297 (350)
T 1rdq_E 254 -KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297 (350)
T ss_dssp -CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred -CCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCc
Confidence 11234445677899999999999999998 9999988654
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-47 Score=382.22 Aligned_cols=253 Identities=19% Similarity=0.161 Sum_probs=209.1
Q ss_pred cCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCC
Q 009750 67 NNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143 (527)
Q Consensus 67 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 143 (527)
-....+.+++.||+|+||+||+|+++. +++.||||++++.. ....+.+.+|+.+++.++|||||+++++|.+..
T Consensus 66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~---~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 66 MKAEDYEVVKVIGRGAFGEVQLVRHKS---TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred cCccccEEEEEEEcCCCEEEEEEEECC---CCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 334556688899999999999999987 78999999987531 223456899999999999999999999999999
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
.++|||||++||+|.+++.. ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++..
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 99999999999999999963 46899999999999999999999999 999999999999999999999999999876
Q ss_pred CCC-----CccccCCccCCcccccCCc----CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 224 RDG-----KSYSTNLAYTPPEYLRNGR----VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 224 ~~~-----~~~~~t~~y~aPE~~~~~~----~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
... .+.+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+....
T Consensus 219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----------------- 281 (410)
T 3v8s_A 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----------------- 281 (410)
T ss_dssp CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----------------
T ss_pred ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-----------------
Confidence 543 2567999999999997655 88999999999999999999999976532110
Q ss_pred Ccchhhcccc--cCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhccc
Q 009750 295 KNILHLMDSH--LEGNFSSEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLAPL 345 (527)
Q Consensus 295 ~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dp~~--Rpt~~~vl~~L~~~ 345 (527)
...++... ...+.....+..+.+||.+||..+|.+ ||++.+|++|-+.-
T Consensus 282 --~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~ 334 (410)
T 3v8s_A 282 --YSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFK 334 (410)
T ss_dssp --HHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGC
T ss_pred --HHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcccc
Confidence 11111110 111111234567899999999999988 99999999997653
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=375.47 Aligned_cols=248 Identities=18% Similarity=0.249 Sum_probs=208.5
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
...+.+++.||+|+||.||+|+++. +++.||||++++.. ....+.+.+|..++..+ +||||+++++++.+...
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKK---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 3456678889999999999999987 88999999997642 23456788999999987 99999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
++|||||++||+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++...
T Consensus 93 ~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 9999999999999999973 457999999999999999999999999 9999999999999999999999999998643
Q ss_pred C----CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 225 D----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 225 ~----~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+... ... .+
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----------~~~--------~i 230 (345)
T 1xjd_A 170 LGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-----------LFH--------SI 230 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHH--------HH
T ss_pred cCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH-----------HHH--------HH
Confidence 2 245678999999999999999999999999999999999999997543111 001 11
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHhc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTK-DLVSTLA 343 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~-~vl~~L~ 343 (527)
... ...++...+..+.+||.+||..||.+||++. ++++|-+
T Consensus 231 ~~~--~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~ 272 (345)
T 1xjd_A 231 RMD--NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL 272 (345)
T ss_dssp HHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGG
T ss_pred HhC--CCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCcc
Confidence 111 1223444567789999999999999999997 7777654
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-46 Score=383.17 Aligned_cols=251 Identities=17% Similarity=0.165 Sum_probs=205.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.+++.||+|+||+||+|.+.. +++.||+|++...... ..+.+.+|+.+++.++|||||++++++.+.+..++|
T Consensus 12 ~Y~i~~~LG~G~fg~V~~~~~~~---~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 12 EYQLFEELGKGAFSVVRRCVKVL---AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HEEEEEEEEEC--CEEEEEEETT---TTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred CeEEEEEeccCCCeEEEEEEECC---CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 35577889999999999999987 8899999999765432 235689999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC---CCCCceeecccCccccCC
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD---ENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~---~~~~~kl~DFG~a~~~~~ 225 (527)
|||++||+|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++.....
T Consensus 89 ~E~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 89 FDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp ECCCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 999999999999973 467999999999999999999999999 99999999999998 568899999999976554
Q ss_pred C----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 226 G----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 226 ~----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
. ....||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+... ..........
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-----------~~~~i~~~~~---- 230 (444)
T 3soa_A 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-----------LYQQIKAGAY---- 230 (444)
T ss_dssp TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----------HHHHHHHTCC----
T ss_pred CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-----------HHHHHHhCCC----
Confidence 3 24578999999999999899999999999999999999999997643211 0111111100
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..........++.+.+||.+||+.||.+|||+.++++|-+.
T Consensus 231 --~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~ 271 (444)
T 3soa_A 231 --DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271 (444)
T ss_dssp --CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTT
T ss_pred --CCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccc
Confidence 00111112345678999999999999999999999998653
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-47 Score=372.94 Aligned_cols=249 Identities=18% Similarity=0.191 Sum_probs=208.4
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
+..+.+++.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++......
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 84 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYK---TQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDI 84 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence 3456788899999999999999987 88999999987532 22346799999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++||||+ +|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 85 ~lv~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 85 VMVIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp EEEECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EEEEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999999 6799998873 457999999999999999999999999 99999999999999999999999999986554
Q ss_pred C---CccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 226 G---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
. ...+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........ ...+.
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------------~~~i~ 221 (336)
T 3h4j_B 161 GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------------------FKKVN 221 (336)
T ss_dssp SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------------BCCCC
T ss_pred CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------------HHHHH
Confidence 3 35578999999999988776 7899999999999999999999865321110 00010
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
. .....+...++.+.+|+.+||+.||.+|||+.++++|-+.-
T Consensus 222 ~--~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~ 263 (336)
T 3h4j_B 222 S--CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFN 263 (336)
T ss_dssp S--SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHH
T ss_pred c--CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhc
Confidence 0 01123444567789999999999999999999999987653
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=359.75 Aligned_cols=251 Identities=21% Similarity=0.308 Sum_probs=208.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||+|+||.||+|.+. ++..||||+++... ...+++.+|+.++.+++||||+++++++.+....++|||
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 9 EITLLKELGSGQFGVVKLGKWK----GQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred heeeeeeeccCCCceEEEEEec----CceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 4557888999999999999887 56679999997654 345789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 84 YISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp CCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred ccCCCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 9999999999975 3346999999999999999999999999 9999999999999999999999999998655432
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...+|+.|+|||++.+..++.++||||||+++|||+| |+.||...+... .... +...
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----------~~~~---------~~~~ 221 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-----------VVLK---------VSQG 221 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----------HHHH---------HHTT
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-----------HHHH---------HHcC
Confidence 2344677999999998899999999999999999999 999986542111 0000 0111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
.....+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 222 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 222 HRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11122333456789999999999999999999999999998653
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=372.20 Aligned_cols=257 Identities=18% Similarity=0.190 Sum_probs=207.8
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcC-CCCccceeEEEEEeCCee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 145 (527)
..+.+++.||+|+||.||+|+++. +++.||||++++..... .+.+.+|+.++.++ +||||+++++++.+...+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 85 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKK---TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 85 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hheEEEEEEEecCCeEEEEEEECC---CCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence 345678899999999999999987 88999999998764433 34588999999988 899999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
+|||||+++|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++....
T Consensus 86 ~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 86 FFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EEEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 999999999999999974 357999999999999999999999999 99999999999999999999999999985322
Q ss_pred ----CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 226 ----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||............ ..... ...+.
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~--~~~~~--------~~~i~ 232 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN--TEDYL--------FQVIL 232 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---------CHHHH--------HHHHH
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccc--cHHHH--------HHHHH
Confidence 23567899999999999999999999999999999999999999643211100000 00000 01111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHHhcc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT------KDLVSTLAP 344 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~------~~vl~~L~~ 344 (527)
.. ...++...+..+.+||.+||+.||.+||++ .++++|-..
T Consensus 233 ~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f 279 (345)
T 3a8x_A 233 EK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279 (345)
T ss_dssp HC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred cC--CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence 11 122444556778999999999999999995 788887553
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=370.47 Aligned_cols=260 Identities=16% Similarity=0.240 Sum_probs=202.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCC----eee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD----ERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~ 146 (527)
.+.+++.||+|+||+||+|++ .++.||||++.... .....+.+|+.++++++|||||++++++.... .++
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 25 PLQLLEVKARGRFGCVWKAQL-----LNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp EEEEEEEEECSTTCEEEEEEE-----TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hchhhheecccCceEEEEEEE-----CCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 456788999999999999987 45889999997543 12345677999999999999999999998754 369
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC----------CCccccccCCCceEeCCCCCceeec
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE----------GRPLYHDLNAYRVLFDENGDPRLSC 216 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~----------~~ivH~Dlkp~NIll~~~~~~kl~D 216 (527)
+||||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||+|
T Consensus 99 lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECC
T ss_pred EEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999999964 4599999999999999999999998 8 99999999999999999999999
Q ss_pred ccCccccCCC------CccccCCccCCcccccC-----CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccch
Q 009750 217 FGLMKNSRDG------KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 217 FG~a~~~~~~------~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 285 (527)
||+++..... ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.+....... +..
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~--~~~-- 250 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML--PFE-- 250 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCC--TTH--
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhcc--chh--
Confidence 9999764432 23568999999999986 34677899999999999999999999765332110 000
Q ss_pred hhHHHHHhcCcch---h-hcccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 286 FGALDMIRGKNIL---H-LMDSHLEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 286 ~~~~~~~~~~~~~---~-~~~~~~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.......... . +......... ....+..+.+||.+||+.||++|||+.++++.|+.++.
T Consensus 251 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 251 ---EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp ---HHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---hhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0000000000 0 0111111111 22456779999999999999999999999999998753
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-47 Score=370.02 Aligned_cols=256 Identities=23% Similarity=0.342 Sum_probs=207.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCC----CceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGND----NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~----~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
.+.+++.||+|+||+||+|.+..... .++.||+|++........+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (289)
T 4fvq_A 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENI 88 (289)
T ss_dssp GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCE
T ss_pred HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCE
Confidence 45577889999999999999876211 12579999997765555678999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC--------ceeeccc
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD--------PRLSCFG 218 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~--------~kl~DFG 218 (527)
+||||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||
T Consensus 89 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 89 LVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp EEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred EEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 99999999999999975 3345899999999999999999999999 999999999999998887 9999999
Q ss_pred CccccCCCCccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 219 LMKNSRDGKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 219 ~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
++..........+|+.|+|||++.+ ..++.++|||||||++|||++|..|+........ .....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~----------~~~~~----- 231 (289)
T 4fvq_A 167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR----------KLQFY----- 231 (289)
T ss_dssp SCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH----------HHHHH-----
T ss_pred ccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH----------HHHHh-----
Confidence 9987766666678999999999987 6689999999999999999997655433211000 00000
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
.. ....+...+..+.+|+.+||+.||.+|||+.+++++|+.+..+.
T Consensus 232 ----~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 232 ----ED--RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp ----HT--TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred ----hc--cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 00 11122222456889999999999999999999999999987533
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-47 Score=373.53 Aligned_cols=255 Identities=18% Similarity=0.260 Sum_probs=204.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCC-CceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGND-NRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.+++.||+|+||+||+|++..... ....||+|.+..... ...+.+.+|+.++++++||||++++++|... ..++|
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v 94 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI 94 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEE
Confidence 35577889999999999999876210 123468888865432 3457899999999999999999999999875 47899
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
+||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 95 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp EECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred EEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999999999975 4567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred -----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 228 -----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.... .+...+
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------------------~~~~~~ 232 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--------------------EISSIL 232 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------------------GHHHHH
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--------------------HHHHHH
Confidence 2345778999999999999999999999999999999 99998654211 111222
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
........+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 233 EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 22222334445567799999999999999999999999999988654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=373.61 Aligned_cols=249 Identities=18% Similarity=0.200 Sum_probs=209.5
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
...+.+++.||+|+||.||+|+.+. +++.||||++++.. ....+.+.+|..++..+ +||||+++++++.+.+.
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETT---EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 4456688899999999999999987 88999999997642 23456789999999998 89999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
+||||||++||+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++...
T Consensus 96 ~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999999973 356999999999999999999999999 9999999999999999999999999998632
Q ss_pred C----CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 225 D----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 225 ~----~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+... . ...+
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-----------~--------~~~i 233 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-----------L--------FQSI 233 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------H--------HHHH
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH-----------H--------HHHH
Confidence 2 235678999999999999999999999999999999999999997543111 0 1111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLAP 344 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~~ 344 (527)
... ...++...+..+.+||.+||..||.+||+ +.++++|-..
T Consensus 234 ~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f 280 (353)
T 2i0e_A 234 MEH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 280 (353)
T ss_dssp HHC--CCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGG
T ss_pred HhC--CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccc
Confidence 111 12244456678999999999999999995 5888887553
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=372.95 Aligned_cols=250 Identities=20% Similarity=0.211 Sum_probs=207.3
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||+|++.. +++.||||++....... .+.+.+|++++++++||||+++++++......+||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred eeeeeEEccCCCEEEEEEEEcc---CCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 4467788999999999999877 88999999997654332 24689999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 228 (527)
|||+. |+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 133 ~e~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp EECCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred EecCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 99997 588888854 3467999999999999999999999999 99999999999999999999999999988777777
Q ss_pred cccCCccCCccccc---CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 229 YSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 229 ~~~t~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
..+|+.|+|||++. +..++.++|||||||++|||++|+.||...+.... .. .+.....
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~----------~~---------~~~~~~~ 270 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----------LY---------HIAQNES 270 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------HH---------HHHHSCC
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----------HH---------HHHhcCC
Confidence 88999999999985 46789999999999999999999999865431110 00 0111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
....+...+..+.+||.+||+.||.+|||+.+++++.+...
T Consensus 271 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 271 PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence 11112234566889999999999999999999999877643
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=373.70 Aligned_cols=250 Identities=18% Similarity=0.188 Sum_probs=206.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 31 y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 31 YDVKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eEEeeEEecCCCeEEEEEEECC---CCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5577889999999999999987 78999999997654322 356899999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC---CceeecccCccccCCC
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGLMKNSRDG 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~---~~kl~DFG~a~~~~~~ 226 (527)
||+++|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||++......
T Consensus 108 e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 108 DLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CCCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred ecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999999999997 4567999999999999999999999999 99999999999998654 5999999999876543
Q ss_pred ---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 ---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
....||+.|+|||++.+..++.++|||||||++|+|++|..||...+... ..........
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-----------~~~~i~~~~~------ 247 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-----------LYAQIKAGAY------ 247 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHHHHHTCC------
T ss_pred cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-----------HHHHHHhCCC------
Confidence 24578999999999998899999999999999999999999997543211 0111111000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..........+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 248 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 288 (362)
T 2bdw_A 248 DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288 (362)
T ss_dssp CCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHH
T ss_pred CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence 00001112345678999999999999999999999988653
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-47 Score=380.35 Aligned_cols=248 Identities=18% Similarity=0.130 Sum_probs=199.9
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
...||+|+||.||+|.+.. +++.||||+++.......+.+.+|+.+|++++||||+++++++...+..+|||||+++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETA---TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEECC-----CEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred ceEEecCcCEEEEEEEEcC---CCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 4568999999999999987 7899999999875544567899999999999999999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe--CCCCCceeecccCccccCCC---Ccc
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF--DENGDPRLSCFGLMKNSRDG---KSY 229 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll--~~~~~~kl~DFG~a~~~~~~---~~~ 229 (527)
|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..... ...
T Consensus 171 ~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~ 248 (373)
T 2x4f_A 171 GELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN 248 (373)
T ss_dssp CEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCC
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccc
Confidence 999998864 3456899999999999999999999999 9999999999999 66788999999999876543 344
Q ss_pred ccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCC
Q 009750 230 STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309 (527)
Q Consensus 230 ~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (527)
.+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.... ......... ......
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----------~~~i~~~~~------~~~~~~ 311 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-----------LNNILACRW------DLEDEE 311 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----------HHHHHHTCC------CSCSGG
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-----------HHHHHhccC------CCChhh
Confidence 689999999999988899999999999999999999999976532110 000000000 000001
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 310 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 310 ~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~ 346 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCc
Confidence 12345678999999999999999999999998553
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-46 Score=363.14 Aligned_cols=262 Identities=19% Similarity=0.233 Sum_probs=202.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
...+.+++.||+|+||+||+|.+. +++.||||++....... .+.+.+|+.++++++||||+++++++.+....+
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 95 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS----QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT 95 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET----TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC----CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence 355678889999999999999986 67889999997654322 457899999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 96 LVFEFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp EEEECCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred EEEcCCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99999985 88888864 4456999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc-----
Q 009750 227 ----KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN----- 296 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 296 (527)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+........ ..........
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-------~i~~~~~~~~~~~~~ 245 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP-------KIFSILGTPNPREWP 245 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHH-------HHHHHHCCCCTTTSG
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHH-------HHHHHHCCCChHHhh
Confidence 34467999999999976 458999999999999999999999997654321100 0000000000
Q ss_pred ----chhhccccc--CCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 ----ILHLMDSHL--EGN-----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ----~~~~~~~~~--~~~-----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......... ... .....+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f 304 (311)
T 3niz_A 246 QVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304 (311)
T ss_dssp GGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred hhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccc
Confidence 000000000 000 011234578899999999999999999999998654
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=385.93 Aligned_cols=250 Identities=20% Similarity=0.289 Sum_probs=208.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
...+.+.||+|+||.||+|.+. ++..||||+++... ...+.|.+|+.+|++++|||||++++++. .+..+||||
T Consensus 189 ~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 189 SLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GEEEEEEEECCSSEEEEEEEET----TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred HeEEEEEcccCCceEEEEEEEC----CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 3446778999999999999987 46779999998654 35678999999999999999999999986 667899999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 341 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 341 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence 999999999997543446899999999999999999999999 999999999999999999999999999875432
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....+|+.|+|||++.+..++.++|||||||+||||+| |+.||.+.+... .. ..+...
T Consensus 342 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~-----------~~---------~~i~~~ 401 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----------VI---------RALERG 401 (454)
T ss_dssp TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----------HH---------HHHHHT
T ss_pred cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH-----------HH---------HHHHcC
Confidence 22345678999999998899999999999999999999 999987543110 11 111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.+...+..++..+.+||.+||+.||.+|||+.++++.|+.+..
T Consensus 402 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 402 YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 2223345566789999999999999999999999999998764
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=365.30 Aligned_cols=256 Identities=14% Similarity=0.106 Sum_probs=206.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++.... ..+.+.+|+.+++++ +||||+++++++......+|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLY---TNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETT---TTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEeeccCCceEEEEEECC---CCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 35577889999999999999877 88999999987543 235799999999999 9999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC-----ceeecccCccccC
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD-----PRLSCFGLMKNSR 224 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~-----~kl~DFG~a~~~~ 224 (527)
||+ +++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 85 ELL-GPSLEDLFDL-CDRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp ECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred EeC-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 999 8999999975 3567999999999999999999999999 999999999999998887 9999999998643
Q ss_pred CC-----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 225 DG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 225 ~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.... ........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~--------~~~~~~i~ 233 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL--------KERYQKIG 233 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--------HHHHHHHH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--------HHHHHHHH
Confidence 22 345789999999999999999999999999999999999999976432110 00000000
Q ss_pred cCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
..... ....... ...+ .+.+|+.+||+.||.+||++.++++.|+.+...
T Consensus 234 ~~~~~-~~~~~~~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 234 DTKRA-TPIEVLC----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHHH-SCHHHHT----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhcc-CCHHHHh----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 00000 0000000 1123 789999999999999999999999999876543
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=356.68 Aligned_cols=252 Identities=20% Similarity=0.350 Sum_probs=205.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCCh-------HHHHHHHHHhhcCCCCccceeEEEEEeCC
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-------KQFADEAWGVGKLRHKRLANLIGYCCDGD 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~-------~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 143 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++........ +.+.+|+.++++++||||+++++++.+..
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 20 EIEYEKQIGKGGFGLVHKGRLVK---DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp TEEEEEECCCCSSSCEEEEEETT---TCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred cceehhccccCCceeEEEEEEcC---CceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 45578889999999999999987 788999999976543321 57899999999999999999999986554
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCC-ccccccCCCceEeCCCCC-----ceeecc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR-PLYHDLNAYRVLFDENGD-----PRLSCF 217 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~-ivH~Dlkp~NIll~~~~~-----~kl~DF 217 (527)
++||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.++ ++||||||+|||++.++. +||+||
T Consensus 97 --~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp --EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred --eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 799999999999998864 45579999999999999999999999863 999999999999988776 999999
Q ss_pred cCccccCCC-CccccCCccCCccccc--CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 218 GLMKNSRDG-KSYSTNLAYTPPEYLR--NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 218 G~a~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
|+++..... ....+|+.|+|||++. ...++.++|||||||++|||++|+.||........ .
T Consensus 174 g~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~------------~---- 237 (287)
T 4f0f_A 174 GLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI------------K---- 237 (287)
T ss_dssp TTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH------------H----
T ss_pred CccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH------------H----
Confidence 999865443 3457899999999994 45578999999999999999999999865432110 0
Q ss_pred CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
....+.........+...++.+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 238 -FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -HHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 00111112223334455667899999999999999999999999998753
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-46 Score=359.88 Aligned_cols=263 Identities=18% Similarity=0.226 Sum_probs=204.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
..+.+++.||+|+||+||+|.+.. +++.||||++....... .+.+.+|+.++++++||||+++++++.+....+|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 78 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTL 78 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECC---CCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEE
Confidence 456688899999999999999987 78999999997654332 3678999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+++ +|.+.+.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 79 v~e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 79 VFEFCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp EEECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred EEecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence 9999986 66666643 4567999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc---Cc---
Q 009750 227 ---KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG---KN--- 296 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--- 296 (527)
....+|+.|+|||++.+.. ++.++|||||||++|||++|..||........... ........ ..
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~------~i~~~~~~~~~~~~~~ 229 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK------RIFRLLGTPTEEQWPS 229 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHH------HHHHHHCCCCTTTCTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHH------HHHHHhCCCChhhhhh
Confidence 3456799999999998766 79999999999999999999888644322110000 00000000 00
Q ss_pred chhhcc---------cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 ILHLMD---------SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~~~---------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.....+ ...........+..+.+|+.+||+.||++|||+.++++|-+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 286 (292)
T 3o0g_A 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286 (292)
T ss_dssp GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccc
Confidence 000000 000011223456678899999999999999999999998654
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=376.12 Aligned_cols=252 Identities=19% Similarity=0.174 Sum_probs=208.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||+|+||.||+|.+.. +++.||+|++......+...+.+|+.+|+.++||||+++++++.+....+||||
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKA---TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEecCCCEEEEEEEECC---CCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 45678889999999999999987 788999999976543345579999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC--CCCceeecccCccccCCCC-
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE--NGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~--~~~~kl~DFG~a~~~~~~~- 227 (527)
|+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 129 ~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 129 FLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred cCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999963 3457999999999999999999999999 999999999999974 5789999999998765442
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...+|+.|+|||++.+..++.++|||||||++|||++|..||.+.+... ......... ...
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-----------~~~~i~~~~------~~~ 269 (387)
T 1kob_A 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-----------TLQNVKRCD------WEF 269 (387)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-----------HHHHHHHCC------CCC
T ss_pred eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH-----------HHHHHHhCC------CCC
Confidence 3468999999999999899999999999999999999999997643211 011111000 001
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
........+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 270 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 308 (387)
T 1kob_A 270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308 (387)
T ss_dssp CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTT
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccc
Confidence 111223445678999999999999999999999998654
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=372.12 Aligned_cols=259 Identities=23% Similarity=0.292 Sum_probs=210.9
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCC--CCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
...+.+++.||+|+||.||+|.+.... .+++.||||+++...... .+.+.+|+.++++++||||+++++++.+.+..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 345567888999999999999987421 256899999998654222 45799999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcC----------------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCc
Q 009750 146 LLVAEYMPNDTLAKHLFHWE----------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~N 203 (527)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~N 204 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRN 204 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcce
Confidence 99999999999999997532 157899999999999999999999999 9999999999
Q ss_pred eEeCCCCCceeecccCccccCC------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccc
Q 009750 204 VLFDENGDPRLSCFGLMKNSRD------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVV 276 (527)
Q Consensus 204 Ill~~~~~~kl~DFG~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~ 276 (527)
||++.++.+||+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|||+| |..||.+.+...
T Consensus 205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 284 (343)
T 1luf_A 205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 284 (343)
T ss_dssp EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH
Confidence 9999999999999999875432 223457889999999998889999999999999999999 998986542110
Q ss_pred cccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 277 WNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
....... ......+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 285 -----------~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 285 -----------VIYYVRD---------GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp -----------HHHHHHT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred -----------HHHHHhC---------CCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 1111111 111123444566799999999999999999999999999987653
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-46 Score=360.49 Aligned_cols=249 Identities=23% Similarity=0.329 Sum_probs=205.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||+|+||+||+|.+. ++..||||++.... ...+++.+|++++.+++||||+++++++.+....++|||
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 25 DLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GEEEEEECC---CEEEEEEEET----TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHhHhhcCCCCCceEEEEEEc----CCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 4567889999999999999887 56779999998654 345789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 100 YMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CCTTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred ccCCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999999999974 2456999999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||...+... . ...+...
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~-----------~---------~~~~~~~ 237 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-----------T---------AEHIAQG 237 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----------H---------HHHHHTT
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH-----------H---------HHHHhcc
Confidence 23345778999999998889999999999999999998 999986532110 0 0111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.....+...+..+.+|+.+||+.||.+|||+.+++++|+.+.
T Consensus 238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 238 LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 122233344567899999999999999999999999998764
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=361.07 Aligned_cols=253 Identities=20% Similarity=0.267 Sum_probs=198.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+.+.||+|+||.||+|.+......+..||||++...... ..+.+.+|+.++++++||||+++++++. .+..++||
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 94 (281)
T 1mp8_A 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIM 94 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEE
Confidence 455778899999999999999765445678999998764322 2457999999999999999999999984 56789999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 95 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (281)
T 1mp8_A 95 ELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172 (281)
T ss_dssp ECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred ecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCccccc
Confidence 99999999999974 3457999999999999999999999999 9999999999999999999999999998654432
Q ss_pred ---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||.+..... ..... ..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~-----------~~~~i---------~~ 232 (281)
T 1mp8_A 173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-----------VIGRI---------EN 232 (281)
T ss_dssp ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----------HHHHH---------HT
T ss_pred ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH-----------HHHHH---------Hc
Confidence 2345678999999988889999999999999999997 888986543211 01111 11
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
......+...+..+.+|+.+||+.||.+|||+.+++++|+.+.
T Consensus 233 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 233 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1112234455677899999999999999999999999998764
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=366.01 Aligned_cols=271 Identities=18% Similarity=0.279 Sum_probs=207.2
Q ss_pred cccccccCCCCCCCeEEEEEecC-CCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~l 147 (527)
.+.+++.||+|+||+||+|++.. ...+++.||||++........+.+.+|+.++++++||||+++++++... ...++
T Consensus 11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 90 (295)
T 3ugc_A 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90 (295)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEE
T ss_pred HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEE
Confidence 45678899999999999998531 1127899999999865444456799999999999999999999998653 56899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 227 (527)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 91 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 91 IMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp EEECCTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred EEEeCCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 9999999999999975 3446999999999999999999999999 9999999999999999999999999998654322
Q ss_pred -------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 228 -------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
...++..|+|||++.+..++.++|||||||++|||+||..|+............... ... .........
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~ 244 (295)
T 3ugc_A 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK-QGQ---MIVFHLIEL 244 (295)
T ss_dssp -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTC-CTH---HHHHHHHHH
T ss_pred ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCcc-ccc---hhHHHHHHH
Confidence 234567799999999899999999999999999999999887542110000000000 000 000011111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+........+..++..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 245 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 22222333455567789999999999999999999999999988754
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=376.98 Aligned_cols=257 Identities=19% Similarity=0.250 Sum_probs=207.3
Q ss_pred CcccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcC-CCCccceeEEEEEeCCe-
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGDE- 144 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~- 144 (527)
..+.+++.||+|+||.||+|.+.. ...+++.||||+++...... .+.+.+|++++.++ +|||||++++++.+.+.
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 101 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 101 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence 345578889999999999998543 22277999999997653222 35699999999999 89999999999987654
Q ss_pred eeEEEEecCCCCHhHHhhhcCC----------------------------------------------------------
Q 009750 145 RLLVAEYMPNDTLAKHLFHWEN---------------------------------------------------------- 166 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~---------------------------------------------------------- 166 (527)
.++||||+++|+|.+++.....
T Consensus 102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T 3vhe_A 102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 181 (359)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence 8999999999999999975321
Q ss_pred ------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC------CccccCCc
Q 009750 167 ------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG------KSYSTNLA 234 (527)
Q Consensus 167 ------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~------~~~~~t~~ 234 (527)
..+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.
T Consensus 182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~ 260 (359)
T 3vhe_A 182 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260 (359)
T ss_dssp --CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred ccchhccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce
Confidence 12899999999999999999999999 999999999999999999999999999865332 23456889
Q ss_pred cCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHH
Q 009750 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE 313 (527)
Q Consensus 235 y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (527)
|+|||++.+..++.++|||||||++|||+| |+.||.+...... ....+........+...
T Consensus 261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 321 (359)
T 3vhe_A 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------------------FCRRLKEGTRMRAPDYT 321 (359)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-------------------HHHHHHHTCCCCCCTTC
T ss_pred eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-------------------HHHHHHcCCCCCCCCCC
Confidence 999999998899999999999999999998 9999876432110 01111111222234445
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 314 ATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 314 ~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
++.+.+|+.+||+.||.+|||+.+++++|+.+.
T Consensus 322 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 322 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 567899999999999999999999999998764
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=373.29 Aligned_cols=270 Identities=15% Similarity=0.157 Sum_probs=206.2
Q ss_pred cccccccCCCC--CCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEK--APNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G--~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
.+.+++.||+| +||+||+|++.. +++.||||++....... .+.+.+|+.+++.++|||||++++++.+.+..+
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKP---TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcC---CCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 46688889999 999999999987 78999999997654322 356889999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC-
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~- 225 (527)
|||||+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 9999999999999998655577999999999999999999999999 99999999999999999999999998754321
Q ss_pred ----------CCccccCCccCCcccccC--CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhH-HH--
Q 009750 226 ----------GKSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGA-LD-- 290 (527)
Q Consensus 226 ----------~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~-- 290 (527)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+............... ..
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence 123467899999999987 578999999999999999999999997654321100000000000 00
Q ss_pred H-------------HhcCcchhhc---------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 291 M-------------IRGKNILHLM---------DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 291 ~-------------~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
. .........+ .......++...+..+.+||.+||+.||++|||+.++++|-+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f 337 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 337 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGG
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHH
Confidence 0 0000000000 0000011233446779999999999999999999999998554
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-46 Score=367.16 Aligned_cols=244 Identities=17% Similarity=0.249 Sum_probs=197.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCC------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD------ 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------ 143 (527)
.+.+++.||+|+||.||+|++.. +++.||||+++..... ..+.+.+|+.+|++++|||||+++++|.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKV---DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETT---TCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcC---CCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 35578889999999999999987 7889999999755433 3567999999999999999999999986643
Q ss_pred ---------------------------------------------------eeeEEEEecCCCCHhHHhhhcCC-CCcCH
Q 009750 144 ---------------------------------------------------ERLLVAEYMPNDTLAKHLFHWEN-QTIEW 171 (527)
Q Consensus 144 ---------------------------------------------------~~~lv~E~~~~g~L~~~l~~~~~-~~l~~ 171 (527)
..++||||+++|+|.+++..... ...++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 27999999999999999975322 33567
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----------------CccccCCcc
Q 009750 172 AMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----------------KSYSTNLAY 235 (527)
Q Consensus 172 ~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----------------~~~~~t~~y 235 (527)
..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.|
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 778999999999999999999 999999999999999999999999999865443 234689999
Q ss_pred CCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCC---HH
Q 009750 236 TPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS---SE 312 (527)
Q Consensus 236 ~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 312 (527)
+|||++.+..++.++|||||||++|||++|..|+... .. .........++ ..
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----------------~~---------~~~~~~~~~~~~~~~~ 297 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----------------VR---------IITDVRNLKFPLLFTQ 297 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----------------HH---------HHHHHHTTCCCHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----------------HH---------HHHHhhccCCCccccc
Confidence 9999999999999999999999999999987653110 00 00000111222 34
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 313 EATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 313 ~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.++.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~ 328 (332)
T 3qd2_B 298 KYPQEHMMVQDMLSPSPTERPEATDIIENAI 328 (332)
T ss_dssp HCHHHHHHHHHHHCSSGGGSCCHHHHHHSTT
T ss_pred CChhHHHHHHHHccCCCCcCCCHHHHhhchh
Confidence 4567889999999999999999999998743
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=367.51 Aligned_cols=248 Identities=18% Similarity=0.192 Sum_probs=204.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC-----CCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH-----AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++... .....+.+.+|+.+++.++||||+++++++.+.+.+
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRE---TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECC---CCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35577889999999999999987 7899999998642 122467899999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC---ceeecccCc
Q 009750 146 LLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCFGLM 220 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~---~kl~DFG~a 220 (527)
+|||||+++|+|.+++... ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999999888642 2346899999999999999999999999 999999999999986654 999999999
Q ss_pred cccCCC----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 221 KNSRDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 221 ~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
...... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.... ...
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------------~~~------ 242 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER------------LFE------ 242 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH------------HHH------
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH------------HHH------
Confidence 876543 2457899999999999999999999999999999999999999753210 000
Q ss_pred chhhcccccCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 ILHLMDSHLEGNFS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.+..... ..+ ...+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 243 --~i~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~ 290 (351)
T 3c0i_A 243 --GIIKGKY--KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290 (351)
T ss_dssp --HHHHTCC--CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred --HHHcCCC--CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhh
Confidence 0111000 011 1235678999999999999999999999998653
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-46 Score=372.73 Aligned_cols=246 Identities=22% Similarity=0.230 Sum_probs=196.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHH-hhcCCCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWG-VGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
++.+++.||+|+||.||+|+.+. +++.||||++++.... ..+.+.+|..+ ++.++|||||++++++.+.+.+|
T Consensus 39 ~y~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 39 DFHFLKVIGKGSFGKVLLARHKA---EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GEEEEEEEECCTTCEEEEEEETT---TCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred heEEEEEEeeCCCeEEEEEEEcC---CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 45688899999999999999987 7899999999765422 23457778777 57789999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC--
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR-- 224 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~-- 224 (527)
|||||++||+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++...
T Consensus 116 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999999973 457899999999999999999999999 9999999999999999999999999997532
Q ss_pred --CCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 225 --DGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 225 --~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+... . ...++.
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-----------~--------~~~i~~ 253 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-----------M--------YDNILN 253 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-----------H--------HHHHHH
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-----------H--------HHHHHh
Confidence 2345689999999999999999999999999999999999999997543111 0 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH----HHHHHhc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTK----DLVSTLA 343 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~----~vl~~L~ 343 (527)
.. ..++...+..+.+||.+||+.||.+||++. ++++|-.
T Consensus 254 ~~--~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~ 296 (373)
T 2r5t_A 254 KP--LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296 (373)
T ss_dssp SC--CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGG
T ss_pred cc--cCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcc
Confidence 11 123344556789999999999999999974 5555543
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=382.71 Aligned_cols=251 Identities=20% Similarity=0.178 Sum_probs=206.8
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||+||+|+++. +++.||||++++.. ....+.+.+|+.++..++||||++++++|.+.+.++
T Consensus 74 ~~y~~~~~LG~G~fG~V~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~ 150 (437)
T 4aw2_A 74 EDFEILKVIGRGAFGEVAVVKLKN---ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY 150 (437)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred hheEEEEEEEeCCCEEEEEEEEcC---CCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence 345578889999999999999987 78999999997532 222345899999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
|||||++||+|.+++.. ....+++..++.++.||+.||.|||+.+ ||||||||+||||+.++++||+|||+++.....
T Consensus 151 lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 151 LVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp EEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 99999999999999974 3467999999999999999999999999 999999999999999999999999999765443
Q ss_pred -----CccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 227 -----KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 227 -----~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
...+||+.|+|||++. ...++.++|||||||++|||++|+.||.+.+....
T Consensus 229 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~------------------- 289 (437)
T 4aw2_A 229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET------------------- 289 (437)
T ss_dssp SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------------
T ss_pred CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-------------------
Confidence 2357899999999997 56789999999999999999999999976432110
Q ss_pred chhhcccccCCCCC---HHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHhcc
Q 009750 297 ILHLMDSHLEGNFS---SEEATVVFDLASRCLQYEPRE--RPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~dp~~--Rpt~~~vl~~L~~ 344 (527)
...++.......++ ...+..+.+||.+||..+|.+ ||+++++++|-+.
T Consensus 290 ~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff 342 (437)
T 4aw2_A 290 YGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFF 342 (437)
T ss_dssp HHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGG
T ss_pred HHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCcc
Confidence 01111100001111 234667899999999988888 9999999998664
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-46 Score=375.49 Aligned_cols=256 Identities=21% Similarity=0.288 Sum_probs=210.5
Q ss_pred cccccccCCCCCCCeEEEEEecCC----CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDG----NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~----~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
.+.+.+.||+|+||+||+|.+... ...+..||||+++..... ..+.+.+|+++++++ +|||||++++++...+.
T Consensus 70 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~ 149 (382)
T 3tt0_A 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 149 (382)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred heEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCc
Confidence 455778899999999999997531 124578999999765322 235799999999999 99999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
.++||||+++|+|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++
T Consensus 150 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~ 228 (382)
T 3tt0_A 150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDN 228 (382)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTC
T ss_pred eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCCC
Confidence 999999999999999997533 245999999999999999999999999 99999999999999999
Q ss_pred CceeecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCcccccccccc
Q 009750 211 DPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 283 (527)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.+...
T Consensus 229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~------- 301 (382)
T 3tt0_A 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 301 (382)
T ss_dssp CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-------
T ss_pred cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------
Confidence 9999999999865432 23355788999999999999999999999999999999 999986543110
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+...+........+..++..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 302 -------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 302 -------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp -------------HHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------------HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111111122223344456779999999999999999999999999998764
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=380.83 Aligned_cols=254 Identities=17% Similarity=0.142 Sum_probs=197.6
Q ss_pred ccccc-ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEe----CCe
Q 009750 71 SDFIV-SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD----GDE 144 (527)
Q Consensus 71 ~~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~----~~~ 144 (527)
.+.++ +.||+|+||+||+|.+.. +++.||||++.. ...+.+|++++.++ +||||+++++++.. ...
T Consensus 62 ~y~~~~~~LG~G~~g~V~~~~~~~---~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 62 DYKVTSQVLGLGINGKVLQIFNKR---TQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cceeccceeeeccCeEEEEEEECC---CCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 34454 478999999999999987 889999999863 35788999998555 89999999999876 567
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC---CCCceeecccCcc
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMK 221 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG~a~ 221 (527)
++|||||++||+|.+++.......+++..++.|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 899999999999999997544457999999999999999999999999 999999999999997 7899999999998
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
..... ...++|+.|+|||++.+..++.++|||||||++|||++|+.||...+...... ...........
T Consensus 213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-------~~~~~i~~~~~- 284 (400)
T 1nxk_A 213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------GMKTRIRMGQY- 284 (400)
T ss_dssp ECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC-------SHHHHHHHTCC-
T ss_pred ccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH-------HHHHHHHcCcc-
Confidence 75533 34578999999999999999999999999999999999999997653221100 00000100000
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
..........+..+.+||.+||+.||.+|||+.++++|.+...
T Consensus 285 -----~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 327 (400)
T 1nxk_A 285 -----EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327 (400)
T ss_dssp -----CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred -----cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence 0011111234567899999999999999999999999977543
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=361.23 Aligned_cols=267 Identities=15% Similarity=0.167 Sum_probs=211.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC-CCChHHHHHHHHHhhcCCCCccceeEEEEEeCC--eeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD--ERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~l 147 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..+|
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKK---TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECC---CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 35577889999999999999987 78999999997643 234577899999999999999999999998765 7899
Q ss_pred EEEecCCCCHhHHhhhcC-CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe----CCCCCceeecccCccc
Q 009750 148 VAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----DENGDPRLSCFGLMKN 222 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll----~~~~~~kl~DFG~a~~ 222 (527)
||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 999999999999997532 234999999999999999999999999 9999999999999 8888899999999987
Q ss_pred cCCC---CccccCCccCCccccc--------CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHH
Q 009750 223 SRDG---KSYSTNLAYTPPEYLR--------NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 223 ~~~~---~~~~~t~~y~aPE~~~--------~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
.... ....+|+.|+|||++. +..++.++|||||||++|||+||+.||........... .....
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~------~~~~~ 239 (319)
T 4euu_A 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE------VMYKI 239 (319)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHH------HHHHH
T ss_pred cCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHH------HHHHH
Confidence 6543 2456899999999986 56789999999999999999999999864332111000 00011
Q ss_pred HhcCc---chhh---------c--ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 292 IRGKN---ILHL---------M--DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 292 ~~~~~---~~~~---------~--~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..... ...+ + .......++...+..+.+|+.+||+.||++|||+.+++++......
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 11000 0000 0 0011123557788899999999999999999999999999886543
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=357.50 Aligned_cols=250 Identities=21% Similarity=0.268 Sum_probs=196.8
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC----ChHHHHHHHHHhhcCCCCccceeEEEEEeCCe
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP----DPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 144 (527)
+..+.+.+.||+|+||.||+|.+ .++.||||+++..... ..+.+.+|+++++.++||||+++++++...+.
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-----IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-----TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--
T ss_pred hhheeeeeeeccCCCeEEEEEEE-----cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 45667888999999999999997 4577999998765322 24679999999999999999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC--CccccccCCCceEeCC--------CCCcee
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFDE--------NGDPRL 214 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~--~ivH~Dlkp~NIll~~--------~~~~kl 214 (527)
.++||||+++++|.+++. ...+++..++.++.||+.||.|||+.+ +++||||||+|||++. ++.+||
T Consensus 81 ~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl 157 (271)
T 3dtc_A 81 LCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157 (271)
T ss_dssp CEEEEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred eEEEEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEE
Confidence 999999999999999994 457999999999999999999999987 3789999999999986 778999
Q ss_pred ecccCccccCCC--CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHH
Q 009750 215 SCFGLMKNSRDG--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 215 ~DFG~a~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||.+.+....
T Consensus 158 ~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--------------- 222 (271)
T 3dtc_A 158 TDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV--------------- 222 (271)
T ss_dssp CCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH---------------
T ss_pred ccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---------------
Confidence 999999765433 345789999999999988899999999999999999999999875431100
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...+.........+...+..+.+|+.+||+.||.+|||+.+++++|+.+
T Consensus 223 ----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 223 ----AYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----HHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0111111222233445567799999999999999999999999999753
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-46 Score=356.70 Aligned_cols=254 Identities=20% Similarity=0.291 Sum_probs=208.6
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeC--Ce
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG--DE 144 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~ 144 (527)
++.+.+++.||+|+||+||+|++. ++.||||+++...... .+.+.+|+.++++++||||+++++++.+. ..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-----GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-----TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-----CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCC
Confidence 445668889999999999999984 5779999998654322 35799999999999999999999999877 77
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC-CccccccCCCceEeCCCCCceeecccCcccc
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
.++||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ +++||||||+|||++.++.++|+|||++...
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 899999999999999998644456999999999999999999999975 4999999999999999999999999887553
Q ss_pred CCCCccccCCccCCcccccCCcCCC---CcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 224 RDGKSYSTNLAYTPPEYLRNGRVTP---ESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 224 ~~~~~~~~t~~y~aPE~~~~~~~~~---~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
.. ....+|+.|+|||++.+..++. ++|||||||++|||++|+.||...+.... ...+
T Consensus 164 ~~-~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-------------------~~~~ 223 (271)
T 3kmu_A 164 QS-PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-------------------GMKV 223 (271)
T ss_dssp SC-TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-------------------HHHH
T ss_pred cc-cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-------------------HHHH
Confidence 32 3457899999999998776555 79999999999999999999865421110 1111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.........+...+..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 224 ALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11222233445556779999999999999999999999999988754
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-46 Score=365.25 Aligned_cols=255 Identities=20% Similarity=0.283 Sum_probs=209.2
Q ss_pred cccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+.+.||+|+||.||+|.+... ..+++.||||+++..... ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 103 (314)
T 2ivs_A 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLL 103 (314)
T ss_dssp GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEE
Confidence 455777899999999999987421 125688999999764322 23578999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCC----------------------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceE
Q 009750 148 VAEYMPNDTLAKHLFHWEN----------------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVL 205 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIl 205 (527)
||||+++|+|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+|||
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NIl 182 (314)
T 2ivs_A 104 IVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNIL 182 (314)
T ss_dssp EEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEE
T ss_pred EEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheEE
Confidence 9999999999999975322 34899999999999999999999999 999999999999
Q ss_pred eCCCCCceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccc
Q 009750 206 FDENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWN 278 (527)
Q Consensus 206 l~~~~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~ 278 (527)
++.++.+||+|||++....... ...+|+.|+|||++.+..++.++|||||||++|||+| |..||.+.....
T Consensus 183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-- 260 (314)
T 2ivs_A 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER-- 260 (314)
T ss_dssp EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--
Confidence 9999999999999998654332 2345788999999998889999999999999999999 999986543211
Q ss_pred cccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 279 TVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
....+........+...+..+.+|+.+||+.||.+|||+.+++++|+.+.
T Consensus 261 ------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 261 ------------------LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp ------------------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------------------HHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111222334455677999999999999999999999999998764
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-46 Score=360.10 Aligned_cols=251 Identities=21% Similarity=0.351 Sum_probs=212.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+.+.||+|+||+||+|.+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 14 ~~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 14 DITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp GEEEEEESGGGTTCSEEEEEEGG---GTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred ceeEEeecCCCCceeEEEeEecC---CCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 45577889999999999999987 78999999997543 345789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 168 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEE
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccc
Confidence 999999999998666677999999999999999999999999 9999999999999999999999999998765432
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+... ....+...
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--------------------~~~~~~~~ 228 (288)
T 3kfa_A 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------------------VYELLEKD 228 (288)
T ss_dssp ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--------------------HHHHHHTT
T ss_pred ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--------------------HHHHHhcc
Confidence 2345778999999998899999999999999999999 888886543211 11111222
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.....+...+..+.+|+.+||..||.+|||+.++++.|+.+.
T Consensus 229 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 223334455677999999999999999999999999998764
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=366.65 Aligned_cols=250 Identities=19% Similarity=0.236 Sum_probs=200.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC----CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW----PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
.+.+++.||+|+||.||+|+...+..+++.||||++++... .....+.+|+.+|+.++||||+++++++...+.++
T Consensus 18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 97 (327)
T 3a62_A 18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLY 97 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred HeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEE
Confidence 45678889999999999999864434789999999986532 23456889999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC-
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~- 225 (527)
|||||+++|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 98 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 174 (327)
T 3a62_A 98 LILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174 (327)
T ss_dssp EEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC------
T ss_pred EEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCcccccccC
Confidence 99999999999999973 456899999999999999999999999 99999999999999999999999999875432
Q ss_pred ---CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 ---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 ---~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+... . ...+..
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----------~--------~~~i~~ 235 (327)
T 3a62_A 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-----------T--------IDKILK 235 (327)
T ss_dssp ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----------H--------HHHHHH
T ss_pred CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-----------H--------HHHHHh
Confidence 234578999999999999899999999999999999999999997543110 0 011111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
. ...++...+..+.+||.+||..||.+|| ++.++++|-+.
T Consensus 236 ~--~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f 280 (327)
T 3a62_A 236 C--KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280 (327)
T ss_dssp T--CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGG
T ss_pred C--CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcc
Confidence 1 1123444567789999999999999999 78899998664
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=359.31 Aligned_cols=258 Identities=19% Similarity=0.262 Sum_probs=194.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||+|+||.||+|.+.. +++.||||+++.... ...+.+.+|+.++++++||||+++++++...+..+|||
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKT---TGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp -------------CEEEEEECSS---SCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ceeEeeEECCCCCEEEEEEEECC---CCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 45578889999999999999987 789999999976543 23467999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcC----CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 150 EYMPNDTLAKHLFHWE----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~----~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
||++ |+|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 9998 59999986432 246899999999999999999999999 99999999999999999999999999986543
Q ss_pred C----CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc------
Q 009750 226 G----KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG------ 294 (527)
Q Consensus 226 ~----~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------ 294 (527)
. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+...... ........
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-------~i~~~~~~~~~~~~ 233 (317)
T 2pmi_A 161 PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK-------LIFDIMGTPNESLW 233 (317)
T ss_dssp CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-------HHHHHHCSCCTTTC
T ss_pred CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-------HHHHHhCCCChhHh
Confidence 2 345789999999999764 58999999999999999999999997654321100 00000000
Q ss_pred ------------------CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 295 ------------------KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 295 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......+... .+...+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f 297 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPH----TKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGG----CSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred hhhhhhhhcccccccccchhHHHhhccc----ccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhh
Confidence 0000000000 111234578999999999999999999999998654
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=368.48 Aligned_cols=260 Identities=19% Similarity=0.265 Sum_probs=195.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCee---
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER--- 145 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~--- 145 (527)
.+.+++.||+|+||+||+|.+.........||||+++..... ..+.+.+|+.++++++||||+++++++......
T Consensus 24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (323)
T 3qup_A 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL 103 (323)
T ss_dssp -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence 455778899999999999998863222247999999865322 346799999999999999999999999877655
Q ss_pred ---eEEEEecCCCCHhHHhhhcC----CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 146 ---LLVAEYMPNDTLAKHLFHWE----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 146 ---~lv~E~~~~g~L~~~l~~~~----~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCC
T ss_pred CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeecc
Confidence 99999999999999996432 225899999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHH
Q 009750 219 LMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 219 ~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |+.||.+.+...
T Consensus 183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------------- 247 (323)
T 3qup_A 183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--------------- 247 (323)
T ss_dssp C-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---------------
T ss_pred ccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---------------
Confidence 997654322 2345778999999998899999999999999999999 888886543211
Q ss_pred HhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCCCC
Q 009750 292 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 351 (527)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~~~ 351 (527)
....+........+...+..+.+|+.+||+.||.+|||+.++++.|+.+...+..
T Consensus 248 -----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 248 -----IYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp -----HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred -----HHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 0011111111223444566799999999999999999999999999988765543
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=386.28 Aligned_cols=267 Identities=16% Similarity=0.172 Sum_probs=187.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeC-----C
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG-----D 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~ 143 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++...... ..+++.+|+.+|++++|||||++++++... .
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKL---EKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TEEECCC-------CEEEEEECC-----CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CeEEeeEeeecCCeEEEEEEECC---CCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 46688899999999999999987 8899999999764322 245789999999999999999999999543 5
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
.+||||||+. ++|..++. ....+++..++.|+.||+.||.|||+.+ ||||||||+||||+.++.+||+|||+++..
T Consensus 131 ~~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CEEEEECCCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred eEEEEEeccc-cchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhc
Confidence 6899999985 69999997 5567999999999999999999999999 999999999999999999999999999865
Q ss_pred CC-------------------------------CCccccCCccCCccccc-CCcCCCCcccchhhHHHHHHHh-------
Q 009750 224 RD-------------------------------GKSYSTNLAYTPPEYLR-NGRVTPESVIFSFGTVLLDLLS------- 264 (527)
Q Consensus 224 ~~-------------------------------~~~~~~t~~y~aPE~~~-~~~~~~~~DvwslGvvl~ellt------- 264 (527)
.. ....+||+.|+|||++. +..++.++||||||||||||+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~ 286 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence 32 12346799999999864 5669999999999999999999
Q ss_pred ----CCCCCCCCCccccccc-----cccc--------hhhHHHHHhcCc-----------c---hhhcccccCC---CCC
Q 009750 265 ----GKHIPPSHDMVVWNTV-----PIKF--------NFGALDMIRGKN-----------I---LHLMDSHLEG---NFS 310 (527)
Q Consensus 265 ----g~~p~~~~~~~~~~~~-----~~~~--------~~~~~~~~~~~~-----------~---~~~~~~~~~~---~~~ 310 (527)
|+++|++.+....... ...+ ............ . ...+...... ...
T Consensus 287 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (458)
T 3rp9_A 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF 366 (458)
T ss_dssp SGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGS
T ss_pred ccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHC
Confidence 6666766432100000 0000 000000000000 0 0000000000 001
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 311 SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 311 ~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+..+.+||.+||..||.+|||+.++++|-+.
T Consensus 367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f 400 (458)
T 3rp9_A 367 PASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400 (458)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred CCCCHHHHHHHHHHhccCccccCCHHHHhcCHhh
Confidence 2235678999999999999999999999999664
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=360.84 Aligned_cols=251 Identities=18% Similarity=0.294 Sum_probs=197.3
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+..+.+.+.||+|+||+||+|.+. ++.||||++... ...+.|.+|+.++++++||||+++++++. +..++|
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv 77 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-----AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-----TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-----CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEE
Confidence 345667888999999999999874 577999998643 23567999999999999999999999886 458999
Q ss_pred EEecCCCCHhHHhhhcCC-CCcCHHHHHHHHHHHHHHHHHhhh---CCCccccccCCCceEeCCCCC-ceeecccCcccc
Q 009750 149 AEYMPNDTLAKHLFHWEN-QTIEWAMRLRVALYIAEALDYCSS---EGRPLYHDLNAYRVLFDENGD-PRLSCFGLMKNS 223 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~aL~~lH~---~~~ivH~Dlkp~NIll~~~~~-~kl~DFG~a~~~ 223 (527)
|||+++|+|.+++..... ..+++..++.++.||+.||.|||+ ++ |+||||||+|||++.++. +||+|||++...
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~ 156 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEccccccccc
Confidence 999999999999974322 247899999999999999999999 77 999999999999998887 799999999765
Q ss_pred CCC-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 224 RDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 224 ~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||........ ...... .
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---------~~~~~~---------~ 218 (307)
T 2eva_A 157 QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF---------RIMWAV---------H 218 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH---------HHHHHH---------H
T ss_pred ccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH---------HHHHHH---------h
Confidence 433 345689999999999998999999999999999999999999864321100 000000 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.......+...+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 219 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 219 NGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp TTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred cCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 111122233445678899999999999999999999999998764
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-46 Score=371.91 Aligned_cols=286 Identities=19% Similarity=0.185 Sum_probs=212.3
Q ss_pred CCCccccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC
Q 009750 49 DGAPAFAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR 128 (527)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~ 128 (527)
.+......+++.+.....+. +.+++.||+|+||+||+|++.. +++.||||+++... ...+.+..|+.+++.+.
T Consensus 17 ~~~~~~~~~~~~~g~~~~~~---y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~ 89 (360)
T 3llt_A 17 QGDDEIVHFSWKKGMLLNNA---FLVIRKMGDGTFGRVLLCQHID---NKKYYAVKVVRNIK-KYTRSAKIEADILKKIQ 89 (360)
T ss_dssp ---CGGGSCCCCTTCEETTT---EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECSCH-HHHHHHHHHHHHHHHTC
T ss_pred ecCccceeeeeecceEecCE---EEEEEEEcccCCeEEEEEEECC---CCeEEEEEEeccch-hhhhhhHHHHHHHHHhc
Confidence 33444555555544333343 4477888999999999999987 78899999997422 22356888999999996
Q ss_pred -----CCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCc
Q 009750 129 -----HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203 (527)
Q Consensus 129 -----H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~N 203 (527)
|||||++++++...+..+|||||+ +++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|
T Consensus 90 ~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~N 167 (360)
T 3llt_A 90 NDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPEN 167 (360)
T ss_dssp CCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGG
T ss_pred ccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCccc
Confidence 999999999999999999999999 889999998655567999999999999999999999999 9999999999
Q ss_pred eEeCC-------------------------CCCceeecccCccccCCC-CccccCCccCCcccccCCcCCCCcccchhhH
Q 009750 204 VLFDE-------------------------NGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGT 257 (527)
Q Consensus 204 Ill~~-------------------------~~~~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv 257 (527)
||++. ++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||
T Consensus 168 Ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 247 (360)
T 3llt_A 168 ILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGC 247 (360)
T ss_dssp EEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHH
T ss_pred EEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHH
Confidence 99975 789999999999865543 4567899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCcccccccc----ccchhhHHHHHhcCcchhhccc-ccCCCCC--------------------HH
Q 009750 258 VLLDLLSGKHIPPSHDMVVWNTVP----IKFNFGALDMIRGKNILHLMDS-HLEGNFS--------------------SE 312 (527)
Q Consensus 258 vl~elltg~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------------~~ 312 (527)
++|||+||+.||...+........ ...+...............+.. .....++ ..
T Consensus 248 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 327 (360)
T 3llt_A 248 VLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKII 327 (360)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHC
T ss_pred HHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccc
Confidence 999999999999765422100000 0000000000000000000000 0000000 00
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 313 EATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 313 ~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.++.+.+||.+||+.||++|||+.++++|-+
T Consensus 328 ~~~~l~~li~~~L~~dP~~Rpta~elL~hp~ 358 (360)
T 3llt_A 328 KHELFCDFLYSILQIDPTLRPSPAELLKHKF 358 (360)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred hHHHHHHHHHHHhcCChhhCCCHHHHhcCcc
Confidence 1256789999999999999999999998743
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-46 Score=366.40 Aligned_cols=244 Identities=19% Similarity=0.233 Sum_probs=184.5
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEEEEecCC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
+.||+|+||+||+|.+.. +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....+|||||+++
T Consensus 17 ~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKK---SNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp CCSEEETTEEEEEEEETT---TCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CccccCCCeEEEEEEECC---CCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 578999999999999987 7899999999754 2467889999999996 99999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC---CceeecccCccccCCC----C
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRLSCFGLMKNSRDG----K 227 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~---~~kl~DFG~a~~~~~~----~ 227 (527)
|+|.+++.. ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... .
T Consensus 91 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 167 (325)
T 3kn6_A 91 GELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167 (325)
T ss_dssp CBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccc
Confidence 999999974 467999999999999999999999999 99999999999997765 7999999999865433 3
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||...+..... .....++.....+
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----------------~~~~~~~~~i~~~ 231 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC----------------TSAVEIMKKIKKG 231 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C----------------CCHHHHHHHHTTT
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc----------------ccHHHHHHHHHcC
Confidence 456799999999999999999999999999999999999999764321110 0011111111111
Q ss_pred C--CC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 308 N--FS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 308 ~--~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
. ++ ...+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 232 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~ 274 (325)
T 3kn6_A 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274 (325)
T ss_dssp CCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGG
T ss_pred CCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhh
Confidence 1 11 2346779999999999999999999999988654
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-46 Score=381.80 Aligned_cols=249 Identities=24% Similarity=0.330 Sum_probs=204.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+.+.||+|+||.||+|.+. .+..||||+++... ...+.|.+|+.+|++++||||+++++++.+ +..+|||||
T Consensus 186 ~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 186 LRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEET----TTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ceeeeeecCCCCeEEEEEEEC----CCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 456778999999999999997 34669999998654 346789999999999999999999999876 678999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK---- 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~---- 227 (527)
+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 99999999997544456999999999999999999999999 9999999999999999999999999998654321
Q ss_pred -ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 -SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 -~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...+++.|+|||++.+..++.++|||||||++|||+| |+.||.+..... ....+....
T Consensus 339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--------------------~~~~i~~~~ 398 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--------------------VLDQVERGY 398 (452)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------------------HHHHHHTTC
T ss_pred cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--------------------HHHHHHcCC
Confidence 2345678999999998899999999999999999999 899987542110 111111122
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+...+..++..+.+||.+||+.||++|||+.++++.|+.+..
T Consensus 399 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 399 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 233445566789999999999999999999999999998754
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=359.38 Aligned_cols=262 Identities=18% Similarity=0.171 Sum_probs=204.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-----CChHHHHHHHHHhhcCC---CCccceeEEEEEeC
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-----PDPKQFADEAWGVGKLR---HKRLANLIGYCCDG 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~ 142 (527)
.+.+++.||+|+||+||+|++.. +++.||||++..... .....+.+|+.+++++. ||||+++++++...
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 10 RYEPVAEIGVGAYGTVYKARDPH---SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp CCEEEEEECCSSSCCEEEEECTT---TCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred ceEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 45578889999999999999887 889999999875432 12357888998888875 99999999999876
Q ss_pred C-----eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecc
Q 009750 143 D-----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (527)
Q Consensus 143 ~-----~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DF 217 (527)
. ..++||||+. |+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeC
Confidence 5 5799999997 59999998655556999999999999999999999999 999999999999999999999999
Q ss_pred cCccccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 218 GLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 218 G~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
|+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..... .........
T Consensus 165 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-------~~i~~~~~~ 237 (308)
T 3g33_A 165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL-------GKIFDLIGL 237 (308)
T ss_dssp SCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH-------HHHHHHHCC
T ss_pred ccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHHHhCC
Confidence 999865433 3457899999999999999999999999999999999999999765422110 000000000
Q ss_pred C---cch---hhcccccC--CC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 295 K---NIL---HLMDSHLE--GN-----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 295 ~---~~~---~~~~~~~~--~~-----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
. ... ........ .. .....+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~ 300 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccc
Confidence 0 000 00000000 00 011235678899999999999999999999998654
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=383.71 Aligned_cols=248 Identities=21% Similarity=0.235 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC---CCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH---AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||.||+|.+.. +++.||||+++.. .......+.+|+.+++.++||||+++++++...+.++
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~ 224 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKA---TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC 224 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcC---CCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEE
Confidence 456678899999999999999987 8899999999754 2233457889999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
|||||+++|+|..++.. ...+++..++.++.||+.||.|||+ .+ |+||||||+||||+.++.+||+|||+++....
T Consensus 225 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 225 FVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EEECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEEeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999999974 4579999999999999999999998 88 99999999999999999999999999976432
Q ss_pred ----CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 226 ----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 226 ----~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
.....||+.|+|||++.+..++.++|||||||+||||++|+.||...+... ... .+.
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----------~~~--------~i~ 362 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-----------LFE--------LIL 362 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHH--------HHH
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH-----------HHH--------HHH
Confidence 235678999999999999999999999999999999999999997543211 001 111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
.. ...++...++.+.+||.+||+.||.+|| ++.++++|-..
T Consensus 363 ~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f 408 (446)
T 4ejn_A 363 ME--EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408 (446)
T ss_dssp HC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred hC--CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccc
Confidence 11 1123444567789999999999999999 99999998664
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-46 Score=363.29 Aligned_cols=243 Identities=19% Similarity=0.201 Sum_probs=196.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||+|.+.. +++.||||++....... ...+..|+..+.++ +||||++++++|.+.+..+||
T Consensus 59 y~~~~~LG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 59 FQRLSRLGHGSYGEVFKVRSKE---DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred eeeeheeccCCCeEEEEEEECC---CCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 4577889999999999999987 78999999987654332 23456666666666 999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+ +++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 136 ~e~~-~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~ 212 (311)
T 3p1a_A 136 TELC-GPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA 212 (311)
T ss_dssp EECC-CCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred Eecc-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCC
Confidence 9999 6699998875 3457999999999999999999999999 999999999999999999999999998765543
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....||+.|+|||++.+ .++.++|||||||++|||++|..||...+ .+..... ...
T Consensus 213 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------------~~~~~~~--------~~~ 269 (311)
T 3p1a_A 213 GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------------GWQQLRQ--------GYL 269 (311)
T ss_dssp --CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------------HHHHHTT--------TCC
T ss_pred CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------------HHHHHhc--------cCC
Confidence 34468999999999875 78999999999999999999987764321 1111111 111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...++...+..+.+|+.+||+.||++|||+.++++|-+
T Consensus 270 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 307 (311)
T 3p1a_A 270 PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPV 307 (311)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcc
Confidence 11111223567899999999999999999999998754
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-46 Score=368.94 Aligned_cols=249 Identities=21% Similarity=0.214 Sum_probs=191.3
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+.+.||+|+||.||+|.+.. +++.||||+++... ..+.+.+|+.++++++||||+++++++......++||||
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~---~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKG---TQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEeeEEeeCCCEEEEEEEECC---CCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 4467788999999999999987 78899999997643 346788999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC---CCCceeecccCccccCCC--
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG~a~~~~~~-- 226 (527)
+++|+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 130 ~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 206 (349)
T 2w4o_A 130 VTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206 (349)
T ss_dssp CCSCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence 99999999997 4567999999999999999999999999 999999999999975 889999999999865443
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ .......... ..
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----------~~~~i~~~~~------~~ 270 (349)
T 2w4o_A 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF----------MFRRILNCEY------YF 270 (349)
T ss_dssp ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH----------HHHHHHTTCC------CC
T ss_pred cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH----------HHHHHHhCCC------cc
Confidence 345789999999999998999999999999999999999999865432110 0011111000 01
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
........+..+.+||.+||+.||++|||+.++++|-+.
T Consensus 271 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~ 309 (349)
T 2w4o_A 271 ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309 (349)
T ss_dssp CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 111223455678999999999999999999999997543
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=359.50 Aligned_cols=249 Identities=21% Similarity=0.240 Sum_probs=196.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhc--CCCCccceeEEEEEeC----Ce
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGK--LRHKRLANLIGYCCDG----DE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~----~~ 144 (527)
.+.+++.||+|+||+||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++... ..
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 9 DITLLECVGKGRYGEVWRGSW-----QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GCEEEEEEEECSSEEEEEEEE-----TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cEEEEEeeccCCCcEEEEEEE-----CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 355778899999999999987 5678999998754 34567777777777 7999999999997653 45
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhh--------hCCCccccccCCCceEeCCCCCceeec
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS--------SEGRPLYHDLNAYRVLFDENGDPRLSC 216 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH--------~~~~ivH~Dlkp~NIll~~~~~~kl~D 216 (527)
.++||||+++|+|.+++. ...+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|
T Consensus 81 ~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEEEECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECC
T ss_pred eEEehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEee
Confidence 899999999999999994 457999999999999999999999 888 99999999999999999999999
Q ss_pred ccCccccCCC--------CccccCCccCCcccccCC------cCCCCcccchhhHHHHHHHhC----------CCCCCCC
Q 009750 217 FGLMKNSRDG--------KSYSTNLAYTPPEYLRNG------RVTPESVIFSFGTVLLDLLSG----------KHIPPSH 272 (527)
Q Consensus 217 FG~a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~DvwslGvvl~elltg----------~~p~~~~ 272 (527)
||+++..... ....+|+.|+|||++.+. .++.++|||||||++|||+|| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 9998754332 234789999999999876 456799999999999999999 6776543
Q ss_pred CccccccccccchhhHHHHHhcCcchhhcccccCCC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 273 DMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN-----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...... ....... ......... ++...+..+.+|+.+||+.||++|||+.++++.|+.+
T Consensus 237 ~~~~~~-------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPNDPS-------FEDMRKV-------VCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCSSCC-------HHHHHHH-------HTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCcc-------hhhhhHH-------HhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 211100 0000000 000011111 2245678899999999999999999999999999865
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=378.80 Aligned_cols=249 Identities=20% Similarity=0.250 Sum_probs=209.1
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||.||+|.+.. +|+.||||++.... ....+.+.+|+.+|+.++||||+++++++......+
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 92 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHEL---TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIF 92 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETT---TCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 345677889999999999999987 78999999997542 233567999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
|||||+++|+|.+++. ..+.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 93 lv~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 93 MVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEEECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999999997 4567999999999999999999999999 999999999999999999999999999876543
Q ss_pred ---CccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.+.+||+.|+|||++.+..+ +.++|||||||++|||++|+.||...+... ... .+..
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-----------~~~--------~i~~ 230 (476)
T 2y94_A 170 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-----------LFK--------KICD 230 (476)
T ss_dssp CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH-----------HHH--------HHHT
T ss_pred ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH-----------HHH--------HHhc
Confidence 35578999999999988765 679999999999999999999997543211 001 1111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.. ...+...++.+.+||.+||+.||.+|||+.++++|-+..
T Consensus 231 ~~--~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~ 271 (476)
T 2y94_A 231 GI--FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271 (476)
T ss_dssp TC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred CC--cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhh
Confidence 11 112333456789999999999999999999999986543
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=357.09 Aligned_cols=261 Identities=20% Similarity=0.254 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
..+.+++.||+|+||+||+|.+. +++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 77 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNN----YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVL 77 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET----TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcC----CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEE
Confidence 35668889999999999999984 678899999975432 234678999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+++ +|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 78 v~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 78 VFEHLDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EEECCSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred EEEecCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9999986 89998864 3467999999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC---c---
Q 009750 227 ---KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK---N--- 296 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--- 296 (527)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+..... .......... .
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 227 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL-------MRIFRILGTPNSKNWPN 227 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-------HHHHHHHCCCCTTTSTT
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHHHHCCCChhhchh
Confidence 344679999999999764 5899999999999999999999999765322100 0000000000 0
Q ss_pred chhh--cccccC-------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 ILHL--MDSHLE-------GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~--~~~~~~-------~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.... .+.... ..+....+..+.+|+.+||+.||++|||+.++++|-+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f 284 (288)
T 1ob3_A 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284 (288)
T ss_dssp GGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred hhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence 0000 000000 00112345678899999999999999999999988653
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-46 Score=386.80 Aligned_cols=253 Identities=20% Similarity=0.233 Sum_probs=211.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+++.||+|+||.||+|.+.. +|+.||||++.+.. ......+.+|+.+|++++|||||++++++.+...++|
T Consensus 185 ~f~~~~~LG~G~fG~Vy~a~~~~---tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 185 TFRQYRVLGKGGFGEVCACQVRA---TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 45567889999999999999987 88999999997532 2345678999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||++||+|.+++.......+++..++.++.||+.||.|||+++ ||||||||+|||++.++++||+|||+++.....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 999999999999997544556999999999999999999999999 999999999999999999999999999876543
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||........ . ..+...+. .
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~----------~------~~i~~~i~-~ 403 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----------R------EEVERLVK-E 403 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC----------H------HHHHHHHH-H
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh----------H------HHHHHHhh-c
Confidence 345789999999999998999999999999999999999999976432110 0 00000000 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
....++...+..+.+||.+||+.||.+|| ++.++++|-+.
T Consensus 404 ~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF 448 (576)
T 2acx_A 404 VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448 (576)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGG
T ss_pred ccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhh
Confidence 11234445567899999999999999999 78999988654
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-46 Score=369.28 Aligned_cols=258 Identities=20% Similarity=0.253 Sum_probs=207.8
Q ss_pred cccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
.+.+++.||+|+||.||+|.+... ..+++.||||++..... ...+.+.+|+.++.++ +||||+++++++...+..+
T Consensus 46 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 125 (344)
T 1rjb_A 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY 125 (344)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccE
Confidence 455778899999999999997421 12677899999985532 3356899999999999 8999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCC---------------------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceE
Q 009750 147 LVAEYMPNDTLAKHLFHWEN---------------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVL 205 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIl 205 (527)
+||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||
T Consensus 126 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl 204 (344)
T 1rjb_A 126 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVL 204 (344)
T ss_dssp EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEE
T ss_pred EEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEE
Confidence 99999999999999975322 24799999999999999999999999 999999999999
Q ss_pred eCCCCCceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccc
Q 009750 206 FDENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWN 278 (527)
Q Consensus 206 l~~~~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~ 278 (527)
++.++.+||+|||++....... ...+|+.|+|||++.+..++.++|||||||++|||+| |..||.+.....
T Consensus 205 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-- 282 (344)
T 1rjb_A 205 VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA-- 282 (344)
T ss_dssp EETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--
T ss_pred EcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH--
Confidence 9999999999999997654322 2345788999999998899999999999999999998 999986543211
Q ss_pred cccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 279 TVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
.+...+........+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 283 -----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 283 -----------------NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp -----------------HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -----------------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 01111112222233444567799999999999999999999999999987653
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=365.03 Aligned_cols=256 Identities=22% Similarity=0.294 Sum_probs=203.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCC-CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+.+.||+|+||+||+|.+.... ..+..||||+++..... ....+.+|+.++++++||||+++++++...+..+|||
T Consensus 46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 125 (333)
T 1mqb_A 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT 125 (333)
T ss_dssp EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEE
Confidence 445678899999999999987531 13467999999765322 2346899999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 126 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 203 (333)
T 1mqb_A 126 EYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203 (333)
T ss_dssp ECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred eCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence 99999999999974 4467999999999999999999999999 9999999999999999999999999998654321
Q ss_pred -----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 228 -----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||...+... .. ..+
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-----------~~---------~~~ 263 (333)
T 1mqb_A 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE-----------VM---------KAI 263 (333)
T ss_dssp -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----------HH---------HHH
T ss_pred ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH-----------HH---------HHH
Confidence 1234678999999998899999999999999999999 999986532110 01 111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
........+...+..+.+|+.+||+.||.+||++.+++++|+.+....
T Consensus 264 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 264 NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp HTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 111122233445677899999999999999999999999999876543
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=370.30 Aligned_cols=254 Identities=20% Similarity=0.295 Sum_probs=196.7
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEe-CCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~E 150 (527)
.+.+.||+|+||+||+|.+......+..||||.++..... ..++|.+|+.++++++||||+++++++.. .+..++|||
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e 171 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 171 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence 3456799999999999998653324567999998754322 24679999999999999999999999764 457899999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 172 ~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 249 (373)
T 3c1x_A 172 YMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249 (373)
T ss_dssp CCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred CCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeecccccccccccccc
Confidence 9999999999964 4456899999999999999999999999 999999999999999999999999999754322
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
....+|+.|+|||++.+..++.++|||||||++|||+| |.+||...+... ... .+
T Consensus 250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~-----------~~~---------~~ 309 (373)
T 3c1x_A 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-----------ITV---------YL 309 (373)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC-----------HHH---------HH
T ss_pred ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH-----------HHH---------HH
Confidence 22345778999999998999999999999999999999 566665432111 000 01
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
........+..++..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 310 ~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 310 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11111122334556789999999999999999999999999987643
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=377.34 Aligned_cols=251 Identities=20% Similarity=0.152 Sum_probs=205.0
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
...+.+++.||+|+||.||+|+.+. +++.||||++++... ...+.+.+|+.++..++||||+++++++.+.+.+
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~---~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQ---TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL 136 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 3455678889999999999999987 889999999975321 1234589999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
||||||++||+|.+++.. ....+++..++.++.||+.||.|||+++ ||||||||+|||++.++++||+|||+++....
T Consensus 137 ~lVmE~~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 137 YLVMEYYVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp EEEECCCCSCBHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEcCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 999999999999999974 2347999999999999999999999999 99999999999999999999999999987654
Q ss_pred C-----CccccCCccCCccccc-------CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 226 G-----KSYSTNLAYTPPEYLR-------NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 226 ~-----~~~~~t~~y~aPE~~~-------~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
. ...+||+.|+|||++. +..++.++|||||||++|||++|+.||.+.+....
T Consensus 215 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~---------------- 278 (412)
T 2vd5_A 215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET---------------- 278 (412)
T ss_dssp TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------------
T ss_pred CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH----------------
Confidence 3 2357899999999997 45689999999999999999999999976432110
Q ss_pred cCcchhhccc--ccC-CCCCHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHHhcc
Q 009750 294 GKNILHLMDS--HLE-GNFSSEEATVVFDLASRCLQYEPRER---PNTKDLVSTLAP 344 (527)
Q Consensus 294 ~~~~~~~~~~--~~~-~~~~~~~~~~~~~li~~cl~~dp~~R---pt~~~vl~~L~~ 344 (527)
...++.. ... ...+...+..+.+||.+||. +|.+| |+++++++|-..
T Consensus 279 ---~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff 331 (412)
T 2vd5_A 279 ---YGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFF 331 (412)
T ss_dssp ---HHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGG
T ss_pred ---HHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCc
Confidence 0111110 000 11123345678999999999 99998 599999998654
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=361.57 Aligned_cols=254 Identities=17% Similarity=0.188 Sum_probs=209.5
Q ss_pred CHHHHHHHhcCCC-cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--------ChHHHHHHHHHhhcCC
Q 009750 58 SLADLRAATNNFS-SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------DPKQFADEAWGVGKLR 128 (527)
Q Consensus 58 ~~~~~~~~~~~~~-~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--------~~~~~~~E~~~l~~l~ 128 (527)
++..+....+.|. .+.+++.||+|+||+||+|.+.. +++.||||+++..... ..+.+.+|+.++++++
T Consensus 11 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 87 (335)
T 3dls_A 11 ELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKE---KNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE 87 (335)
T ss_dssp ECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETT---TTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC
T ss_pred cccccccCCcccccceEEEeEEEecCCEEEEEEEECC---CCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC
Confidence 3334444433332 35577889999999999999987 8899999999865422 2346889999999999
Q ss_pred CCccceeEEEEEeCCeeeEEEEecCCC-CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC
Q 009750 129 HKRLANLIGYCCDGDERLLVAEYMPND-TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 207 (527)
Q Consensus 129 H~nIv~l~~~~~~~~~~~lv~E~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~ 207 (527)
||||+++++++.+.+..++||||+.+| +|.+++. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++
T Consensus 88 h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~ 164 (335)
T 3dls_A 88 HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIA 164 (335)
T ss_dssp CTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC
T ss_pred CCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEc
Confidence 999999999999999999999999777 9999997 4567999999999999999999999999 99999999999999
Q ss_pred CCCCceeecccCccccCCCC---ccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc
Q 009750 208 ENGDPRLSCFGLMKNSRDGK---SYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 208 ~~~~~kl~DFG~a~~~~~~~---~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~ 283 (527)
.++.+||+|||++....... ...||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 165 ~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------- 235 (335)
T 3dls_A 165 EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------- 235 (335)
T ss_dssp TTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------
T ss_pred CCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------
Confidence 99999999999998765432 4568999999999988876 7899999999999999999999853210
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...... ..+...+..+.+|+.+||+.||.+|||+.+++++-+.
T Consensus 236 ----------------~~~~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~ 278 (335)
T 3dls_A 236 ----------------TVEAAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278 (335)
T ss_dssp ----------------GTTTCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTT
T ss_pred ----------------HHhhcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 000001 1122245678999999999999999999999998664
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=356.17 Aligned_cols=255 Identities=18% Similarity=0.156 Sum_probs=200.0
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
+.||+|+||+||+|.+.. +++.||||++........+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 19 ~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLI---TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG 95 (316)
T ss_dssp CCCCCCSSEEEEEEECSS---SCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred ceecCCceEEEEEEEEcC---CCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCC
Confidence 468999999999999887 7889999999876655677899999999995 799999999999999999999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC---ceeecccCccccCCC-----
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCFGLMKNSRDG----- 226 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~---~kl~DFG~a~~~~~~----- 226 (527)
|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 96 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (316)
T 2ac3_A 96 GSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172 (316)
T ss_dssp CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC----------
T ss_pred CcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccc
Confidence 999999974 357899999999999999999999999 999999999999998776 999999998754321
Q ss_pred ------CccccCCccCCcccccC-----CcCCCCcccchhhHHHHHHHhCCCCCCCCCccc--cccccccchhhHHHHHh
Q 009750 227 ------KSYSTNLAYTPPEYLRN-----GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVV--WNTVPIKFNFGALDMIR 293 (527)
Q Consensus 227 ------~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 293 (527)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+..... |....... ....
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~--- 247 (316)
T 2ac3_A 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP--ACQN--- 247 (316)
T ss_dssp ---------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH--HHHH---
T ss_pred ccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch--hHHH---
Confidence 13458999999999975 558999999999999999999999997654321 11000000 0000
Q ss_pred cCcchhhcccccCCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 294 GKNILHLMDSHLEGNFSS----EEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.....+.... ..++. ..+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 248 -~~~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~ 299 (316)
T 2ac3_A 248 -MLFESIQEGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299 (316)
T ss_dssp -HHHHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTC
T ss_pred -HHHHHHhccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhh
Confidence 0000111111 11222 235678999999999999999999999998654
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=351.62 Aligned_cols=251 Identities=24% Similarity=0.332 Sum_probs=208.9
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+.+++.||+|+||.||+|.+. +++.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hheeeeeEecCCCceeEEEEEec----CCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 45667888999999999999987 56779999998654 24578999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 83 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp CCCTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred eCCCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 99999999999975 3457899999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||...+... ..... ..
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----------~~~~i---------~~ 220 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-----------VVEDI---------ST 220 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----------HHHHH---------HT
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH-----------HHHHH---------hc
Confidence 23456778999999988889999999999999999999 888886532110 00101 11
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
......+...+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 221 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 221 GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11122233445678999999999999999999999999988753
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=378.63 Aligned_cols=266 Identities=17% Similarity=0.175 Sum_probs=198.3
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeC-----
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDG----- 142 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----- 142 (527)
..+.+++.||+|+||+||+|.+.. +++.||||++..... ...+++.+|+.+|+.++|||||++++++...
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETT---TTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred CCeEEEEEeecCCCeEEEEEEECC---CCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 346678889999999999999987 889999999976422 2245789999999999999999999999654
Q ss_pred -CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 143 -DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 143 -~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
..++|||||+++ +|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CCeEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 357999999976 5777774 24899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc-----ch-------h
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK-----FN-------F 286 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~-----~~-------~ 286 (527)
..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......... .. .
T Consensus 213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp ----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred ecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence 76543 356789999999999999999999999999999999999999987653211000000 00 0
Q ss_pred hHHHHHhc------CcchhhcccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 287 GALDMIRG------KNILHLMDSHLEGNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 287 ~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
........ ..+...+........ ....+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~ 359 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhh
Confidence 00000000 000011110000000 11236779999999999999999999999998654
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=371.18 Aligned_cols=258 Identities=21% Similarity=0.286 Sum_probs=192.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCC-CCccceeEEEEEeCC--ee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLR-HKRLANLIGYCCDGD--ER 145 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~--~~ 145 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.++.++. ||||+++++++...+ .+
T Consensus 10 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 10 KYELVKKLGKGAYGIVWKSIDRR---TGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp TEEEEEC-------CEEEEEETT---TCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ceEEEEEeeeCCCeEEEEEEECC---CCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 45678899999999999999987 8899999998754322 2456889999999996 999999999997544 68
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
||||||++ ++|..++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp EEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred EEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 99999997 589999963 47899999999999999999999999 99999999999999999999999999975432
Q ss_pred -------------------------CCccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccc
Q 009750 226 -------------------------GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNT 279 (527)
Q Consensus 226 -------------------------~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~ 279 (527)
....++|+.|+|||++.+ ..++.++|||||||++|||++|++||++.+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~ 241 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLE 241 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 123578999999999987 568999999999999999999999998765321100
Q ss_pred ccccchhhHHHHHhcCcc-----------hhhc----------ccccCCCC------------CHHHHHHHHHHHHHhcc
Q 009750 280 VPIKFNFGALDMIRGKNI-----------LHLM----------DSHLEGNF------------SSEEATVVFDLASRCLQ 326 (527)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~-----------~~~~----------~~~~~~~~------------~~~~~~~~~~li~~cl~ 326 (527)
. .......... ...+ .......+ ....++.+.+|+.+||+
T Consensus 242 ~-------i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~ 314 (388)
T 3oz6_A 242 R-------IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314 (388)
T ss_dssp H-------HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred H-------HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence 0 0000000000 0000 00000000 01234578899999999
Q ss_pred cCCCCCCCHHHHHHHhc
Q 009750 327 YEPRERPNTKDLVSTLA 343 (527)
Q Consensus 327 ~dp~~Rpt~~~vl~~L~ 343 (527)
.||.+|||+.++++|-.
T Consensus 315 ~dP~~R~t~~e~l~Hp~ 331 (388)
T 3oz6_A 315 FNPNKRISANDALKHPF 331 (388)
T ss_dssp SSGGGSCCHHHHTTSTT
T ss_pred cCcccCCCHHHHhCCHH
Confidence 99999999999999854
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=356.15 Aligned_cols=252 Identities=21% Similarity=0.287 Sum_probs=204.6
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCee-eEEEEec
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER-LLVAEYM 152 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~lv~E~~ 152 (527)
.+.||+|+||+||+|.+.....++..||||++...... ..+.+.+|+.++++++||||+++++++.+.+.. ++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 46789999999999998765445668999999764322 245789999999999999999999999876655 9999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC-------
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD------- 225 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~------- 225 (527)
.+|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 106 ~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 183 (298)
T 3pls_A 106 CHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183 (298)
T ss_dssp TTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSC
T ss_pred cCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccc
Confidence 99999999974 4567899999999999999999999999 99999999999999999999999999975432
Q ss_pred -CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 226 -GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 226 -~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
.....+|+.|+|||.+.+..++.++|||||||++|+|++|..|+...... ......+...
T Consensus 184 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-------------------~~~~~~~~~~ 244 (298)
T 3pls_A 184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-------------------FDLTHFLAQG 244 (298)
T ss_dssp CSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-------------------GGHHHHHHTT
T ss_pred cCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-------------------HHHHHHhhcC
Confidence 22345688999999999999999999999999999999976665432111 0111111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.....+...+..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 245 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 245 RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1222334455678999999999999999999999999998754
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=365.56 Aligned_cols=249 Identities=17% Similarity=0.161 Sum_probs=207.9
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||.||++.+.. +++.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence 345677889999999999999987 78899999987654322 456899999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 118 lv~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 118 VVLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EEECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999999873 457999999999999999999999999 999999999999999999999999999865422
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||....... ... .+..
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----------~~~--------~~~~ 255 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-----------TYL--------RIKK 255 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------HHH--------HHHH
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-----------HHH--------HHhc
Confidence 34568999999999998889999999999999999999999986542110 000 0100
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
. ...++...+..+.+||.+||+.||.+|||+.+++++-+..
T Consensus 256 ~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~ 296 (335)
T 2owb_A 256 N--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFT 296 (335)
T ss_dssp T--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred C--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccc
Confidence 0 1112334456788999999999999999999999986543
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=355.82 Aligned_cols=253 Identities=19% Similarity=0.256 Sum_probs=207.0
Q ss_pred ccccc-cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVS-ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~-~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+++ .||+|+||.||+|.+.... +++.||||+++..... ..+.+.+|+.++++++||||+++++++ ..+..++||
T Consensus 11 ~~i~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 11 LLIADIELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp EEEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred hhhhhccccccCceeEEEeEeccCC-CcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 44666 7999999999999875322 5788999999865322 245799999999999999999999999 566799999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 89 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 89 EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp ECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999999999964 4456999999999999999999999999 9999999999999999999999999998654322
Q ss_pred -----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 228 -----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||...+... ....+
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------------------~~~~i 226 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--------------------VMAFI 226 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--------------------HHHHH
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--------------------HHHHH
Confidence 2345788999999988889999999999999999999 999986542111 01111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
.......++...+..+.+||.+||+.||.+||++.+++++|+.+..+
T Consensus 227 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 227 EQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11122234455667899999999999999999999999999987643
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=354.80 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=205.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+.+.||+|+||+||+|.+.....++..||||++..... ...+.+.+|+.++++++||||+++++++.+ +..++||
T Consensus 13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 91 (281)
T 3cc6_A 13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIM 91 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEE
T ss_pred ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEE
Confidence 45567788999999999999876544667899999986532 224679999999999999999999999864 5678999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 92 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 169 (281)
T 3cc6_A 92 ELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169 (281)
T ss_dssp ECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred ecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCccccccccc
Confidence 99999999999975 3456899999999999999999999999 999999999999999999999999999865443
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||...+... ....+..
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--------------------~~~~~~~ 229 (281)
T 3cc6_A 170 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--------------------VIGVLEK 229 (281)
T ss_dssp ---CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--------------------HHHHHHH
T ss_pred ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--------------------HHHHHhc
Confidence 23345788999999988889999999999999999998 999986432111 0111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
......+...++.+.+|+.+||+.||.+|||+.+++++|+.+.
T Consensus 230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 230 GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 1112233345567899999999999999999999999998764
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-46 Score=367.02 Aligned_cols=249 Identities=18% Similarity=0.209 Sum_probs=202.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+++.||+|+||.||+|.++. +++.||||++.+... .+.+|++++.++ +||||+++++++.+....++|||
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKA---TNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEEEeeCCCEEEEEEEECC---CCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 5577889999999999999987 889999999976542 346788899888 79999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC----CCceeecccCccccCCC
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN----GDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~----~~~kl~DFG~a~~~~~~ 226 (527)
|++||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||+.++ +.+||+|||+++.....
T Consensus 97 ~~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (342)
T 2qr7_A 97 LMKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173 (342)
T ss_dssp CCCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT
T ss_pred CCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC
Confidence 999999999997 4567999999999999999999999999 9999999999998543 35999999999865432
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....+|+.|+|||++.+..++.++|||||||++|||++|..||........ ............
T Consensus 174 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--------~~~~~~i~~~~~----- 240 (342)
T 2qr7_A 174 NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP--------EEILARIGSGKF----- 240 (342)
T ss_dssp TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH--------HHHHHHHHHCCC-----
T ss_pred CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH--------HHHHHHHccCCc-----
Confidence 345789999999999888899999999999999999999999975321100 001111111110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..........+..+.+||.+||..||.+|||+.++++|-+.
T Consensus 241 -~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~ 281 (342)
T 2qr7_A 241 -SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281 (342)
T ss_dssp -CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred -ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence 11111223456778999999999999999999999998765
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=355.42 Aligned_cols=246 Identities=18% Similarity=0.271 Sum_probs=204.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEe----------
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD---------- 141 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~---------- 141 (527)
+.+++.||+|+||.||+|.+.. +++.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 13 FKEIELIGSGGFGQVFKAKHRI---DGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp EEEEEEEECSSSCCEEEEEETT---TCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred cceeeeeccCCceEEEEEEEcC---CCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 4467788999999999999987 78899999997543 578899999999999999999999864
Q ss_pred ------CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceee
Q 009750 142 ------GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (527)
Q Consensus 142 ------~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~ 215 (527)
....++||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~ 164 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIG 164 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEEC
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEEC
Confidence 345899999999999999997655567999999999999999999999999 9999999999999999999999
Q ss_pred cccCccccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHH
Q 009750 216 CFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 216 DFG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|..|+... ...
T Consensus 165 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------------~~~- 227 (284)
T 2a19_B 165 DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------------SKF- 227 (284)
T ss_dssp CCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------------HHH-
T ss_pred cchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------------HHH-
Confidence 99998875543 3456899999999999989999999999999999999999875310 000
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCCC
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 350 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~~ 350 (527)
...+.... .+...+..+.+|+.+||+.||.+|||+.+++++|+.+...+.
T Consensus 228 ----~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 228 ----FTDLRDGI----ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp ----HHHHHTTC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ----HHHhhccc----ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 01111111 222334568899999999999999999999999999876543
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=359.71 Aligned_cols=255 Identities=20% Similarity=0.280 Sum_probs=204.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEe----CCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD----GDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~ 146 (527)
.+.+++.||+|+||.||++.... +++.||||++........+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 30 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 30 HYLFIQKLGEGGFSYVDLVEGLH---DGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp EEEEEEEEEC--CEEEEEEEETT---TCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred EEEEEEEecCCCCeEEEEEEecC---CCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 46678899999999999999977 789999999876544445679999999999999999999999973 34789
Q ss_pred EEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 147 LVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
+||||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 999999999999999742 3567999999999999999999999999 9999999999999999999999999987643
Q ss_pred CC-------------CccccCCccCCcccccCCc---CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhH
Q 009750 225 DG-------------KSYSTNLAYTPPEYLRNGR---VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGA 288 (527)
Q Consensus 225 ~~-------------~~~~~t~~y~aPE~~~~~~---~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 288 (527)
.. ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------------- 250 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF--------------- 250 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHH---------------
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhh---------------
Confidence 21 1234689999999997654 7899999999999999999999984210
Q ss_pred HHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 289 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..................+...+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 251 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 251 ---QKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp ---HTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred ---cccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 00111111111111222233445679999999999999999999999999998764
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=352.15 Aligned_cols=245 Identities=20% Similarity=0.197 Sum_probs=206.3
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+.+.||+|+||.||+|.+.. ++..||+|++........+.+.+|++++++++||||+++++++.+....++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 11 YTLENTIGRGSWGEVKIAVQKG---TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEeeeEEeecCCEEEEEEEeCC---CCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 4467788999999999999987 7888999999877666778899999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe---CCCCCceeecccCccccCCC--
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~a~~~~~~-- 226 (527)
+++++|.+++.. ...+++..++.++.||+.||.|||+++ ++||||||+|||+ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 88 CTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp CCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 999999999874 456899999999999999999999999 9999999999999 88899999999999765443
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....+|+.|+|||++.+ .++.++|||||||++|||++|+.||...+... ... .+....
T Consensus 165 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----------~~~--------~~~~~~- 223 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-----------VML--------KIREGT- 223 (277)
T ss_dssp BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHH--------HHHHCC-
T ss_pred hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH-----------HHH--------HHHhCC-
Confidence 34578999999999865 48999999999999999999999986543111 000 111110
Q ss_pred CCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSS----EEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~----~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..++. ..+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 224 -~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 265 (277)
T 3f3z_A 224 -FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265 (277)
T ss_dssp -CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred -CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence 11222 235678999999999999999999999987553
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=361.96 Aligned_cols=256 Identities=20% Similarity=0.286 Sum_probs=209.5
Q ss_pred cccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
.+.+.+.||+|+||.||+|.+.. ...+++.||||+++..... ..+.+.+|+.+++++ +||||+++++++...+..+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 103 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 103 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcE
Confidence 45577889999999999998632 1227789999999865432 246799999999999 9999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCC----------------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWEN----------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~----------------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
+||||+++|+|.+++..... ..+++..++.++.||+.||.|||+++ ++||||||+|||++.++
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~ 182 (313)
T 1t46_A 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGR 182 (313)
T ss_dssp EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTT
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCCC
Confidence 99999999999999975332 24899999999999999999999999 99999999999999999
Q ss_pred CceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCcccccccccc
Q 009750 211 DPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 283 (527)
.+||+|||++....... ...+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+......
T Consensus 183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~------ 256 (313)
T 1t46_A 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK------ 256 (313)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH------
T ss_pred CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH------
Confidence 99999999998755432 2345778999999998899999999999999999999 9999865432110
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
....+........+...+..+.+|+.+||+.||.+|||+.+++++|+.+.
T Consensus 257 -------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 257 -------------FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp -------------HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------------HHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 11111111222233445667899999999999999999999999998765
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=360.90 Aligned_cols=252 Identities=19% Similarity=0.223 Sum_probs=197.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCCh---HHHHHHHHHhhcCCCCccceeEEEEEeCCe---
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGDE--- 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~---~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--- 144 (527)
.+.+++.||+|+||.||+|.+.. +++.||||+++.....+. +.+.+|+.++++++||||+++++++.....
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 13 RYELGEILGFGGMSEVHLARDLR---DHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred cEEEEEEEccCCCEEEEEEEECC---CCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 45678889999999999999987 889999999987654442 468999999999999999999999876543
Q ss_pred -eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 145 -RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 145 -~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
.++||||+++++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred ccEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 4999999999999999973 457999999999999999999999999 999999999999999999999999999764
Q ss_pred CCC-------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 224 RDG-------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 224 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.+.... .........
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~----------~~~~~~~~~ 236 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV----------AYQHVREDP 236 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----------HHHHHHCCC
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH----------HHHHhcCCC
Confidence 432 234689999999999999999999999999999999999999976432110 001011000
Q ss_pred chhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH-hccc
Q 009750 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST-LAPL 345 (527)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~-L~~~ 345 (527)
... .. .....+..+.+|+.+||+.||.+||++.+++.+ +..+
T Consensus 237 ~~~---~~----~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 237 IPP---SA----RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CCH---HH----HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCc---cc----ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 000 00 011235678899999999999999987776655 4433
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=355.15 Aligned_cols=246 Identities=15% Similarity=0.158 Sum_probs=204.8
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||+|.+.. +++.||||++....... ...+.+|+.++..+ +||||+++++++.+.+..++|
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 13 FHELEKIGSGEFGSVFKCVKRL---DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhhhhcCCCceEEEEEEEcC---CCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 4577889999999999999987 78999999998654333 45789999999999 999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcC--CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC-----------------
Q 009750 149 AEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN----------------- 209 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~----------------- 209 (527)
|||+++++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~ 168 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 168 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC-------------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence 99999999999997532 267899999999999999999999999 9999999999999844
Q ss_pred --CCceeecccCccccCCCCccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchh
Q 009750 210 --GDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNF 286 (527)
Q Consensus 210 --~~~kl~DFG~a~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 286 (527)
..+||+|||++..........+|+.|+|||++.+. .++.++|||||||++|+|++|.+++...+
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------------- 235 (289)
T 1x8b_A 169 NKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------------- 235 (289)
T ss_dssp -CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-------------
T ss_pred CceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-------------
Confidence 47999999999988777777899999999999876 56789999999999999999987754321
Q ss_pred hHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....... ......+...+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 236 -~~~~~~~---------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~ 283 (289)
T 1x8b_A 236 -QWHEIRQ---------GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 283 (289)
T ss_dssp -HHHHHHT---------TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC
T ss_pred -HHHHHHc---------CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHh
Confidence 0111111 11122333455678999999999999999999999998654
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=362.62 Aligned_cols=252 Identities=18% Similarity=0.259 Sum_probs=203.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCce----EEEEEEcCcCC-CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRR----WIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~----~vAiK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
.+.+++.||+|+||+||+|.+.. +++ .||+|.+.... ....+.+.+|+.++++++||||+++++++.... .
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~---~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 16 EFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC---TTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HceEEEEeeeCCCeEEEEEEEcC---CCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 45678899999999999999876 444 35778776443 334678999999999999999999999998654 8
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
++|+||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 92 ~~v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred eEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 899999999999999975 3567999999999999999999999999 99999999999999999999999999986543
Q ss_pred CC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 226 GK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 226 ~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
.. ...+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.+... +.
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------------------~~ 229 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------------------IS 229 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------------------HH
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------------------HH
Confidence 21 2345778999999999999999999999999999999 999986543211 11
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
..+........+...+..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 230 SILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 12222222233445566789999999999999999999999999988754
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=354.58 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=206.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||+||+|.+.. +++.||||++.... ......+.+|+.++++++||||+++++++.+....+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY 85 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEcc---CCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence 356678889999999999999987 78899999986532 223467999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 86 lv~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999999974 356999999999999999999999999 999999999999999999999999998654433
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....+|+.|+|||++.+..++.++||||||+++|+|++|+.||...+... ...... .
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~~~~~----------~ 221 (279)
T 3fdn_A 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----------TYKRIS----------R 221 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------HHHHHH----------H
T ss_pred cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH-----------HHHHHH----------h
Confidence 34578999999999999899999999999999999999999987543110 000000 0
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
....++...+..+.+|+.+||+.||.+|||+.++++|-+..
T Consensus 222 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~ 262 (279)
T 3fdn_A 222 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 262 (279)
T ss_dssp TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCcccc
Confidence 11223344556788999999999999999999999997643
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-45 Score=357.85 Aligned_cols=245 Identities=18% Similarity=0.190 Sum_probs=206.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC------ChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
+.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 14 YDIGEELGSGQFAIVKKCREKS---TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred EEEeeEeeecCCEEEEEEEECC---CCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 4577889999999999999987 7899999999765332 256799999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC----CceeecccCcc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLMK 221 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~----~~kl~DFG~a~ 221 (527)
++||||+++++|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++.
T Consensus 91 ~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 91 VLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEEECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999999997 4567999999999999999999999999 99999999999999888 79999999998
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
..... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+..... .....
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----------~~~~i------ 230 (321)
T 2a2a_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-----------TLANI------ 230 (321)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-----------HHHHH------
T ss_pred ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-----------HHHHH------
Confidence 76543 34568999999999999999999999999999999999999986543111 00000
Q ss_pred hhcccccCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 299 HLMDSHLEGNFS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 299 ~~~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
... ...++ ...+..+.+||.+||+.||.+|||+.++++|-+
T Consensus 231 --~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~ 275 (321)
T 2a2a_A 231 --TSV--SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (321)
T ss_dssp --HTT--CCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTT
T ss_pred --Hhc--ccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 000 00111 123466889999999999999999999999754
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=365.14 Aligned_cols=248 Identities=19% Similarity=0.265 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCC--CccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRH--KRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~ 146 (527)
.+.+++.||+|+||.||++.+. +++.||||++....... .+.+.+|+.+|.+++| |||+++++++......+
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECT----TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred EEEEEEEEecCCCeEEEEEEeC----CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 4667889999999999999885 67889999987654322 3578999999999976 99999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
||||+ .+++|.+++.. ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 86 lv~e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EEECC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EEEeC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 99995 57899999974 567999999999999999999999999 99999999999997 678999999999865432
Q ss_pred ------CccccCCccCCcccccC-----------CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHH
Q 009750 227 ------KSYSTNLAYTPPEYLRN-----------GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 227 ------~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------------- 227 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------------- 227 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-------------
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-------------
Confidence 24578999999999865 668889999999999999999999986431100
Q ss_pred HHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 290 DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.....+++......++...+..+.+|+.+||+.||.+|||+.++++|.+..
T Consensus 228 -----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 278 (343)
T 3dbq_A 228 -----SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278 (343)
T ss_dssp -----HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred -----HHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence 011122222223334444456788999999999999999999999997754
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=354.43 Aligned_cols=251 Identities=23% Similarity=0.346 Sum_probs=200.3
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeC-CeeeE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG-DERLL 147 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~l 147 (527)
+..+.+++.||+|+||+||+|.+ +++.||||+++... ..+.+.+|+.++++++||||+++++++... +..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-----RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-----TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-----cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 34566888999999999999987 46789999997543 457899999999999999999999997654 47899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+++++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred EEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 999999999999997543344899999999999999999999999 999999999999999999999999998765443
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....+++.|+|||++.+..++.++|||||||++|||+| |+.||...+... ....+....
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--------------------~~~~~~~~~ 231 (278)
T 1byg_A 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------------VVPRVEKGY 231 (278)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--------------------HHHHHTTTC
T ss_pred cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------------------HHHHHhcCC
Confidence 33456889999999988889999999999999999998 999886532110 011111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
....+...++.+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 232 KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 223344556779999999999999999999999999988753
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=361.53 Aligned_cols=254 Identities=23% Similarity=0.294 Sum_probs=205.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceE--EEEEEcCcCC-CCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRW--IAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~--vAiK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
.+.+++.||+|+||.||+|++.. ++.. ||||+++... ....+.+.+|+++++++ +||||+++++++.+.+..+
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 26 DIKFQDVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GCEEEEEEECGGGCEEEEEEEEE---TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HccceeeeecCCCceEEEEEEcc---CCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 45578889999999999999886 5654 4999987543 23356799999999999 9999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCc
Q 009750 147 LVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~ 212 (527)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCE
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeE
Confidence 9999999999999997422 247999999999999999999999999 9999999999999999999
Q ss_pred eeecccCccccCC---CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhH
Q 009750 213 RLSCFGLMKNSRD---GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGA 288 (527)
Q Consensus 213 kl~DFG~a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 288 (527)
||+|||+++.... .....+++.|+|||++.+..++.++|||||||++|||+| |+.||.+.+...
T Consensus 182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------------ 249 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------------ 249 (327)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------------
T ss_pred EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH------------
Confidence 9999999875332 223456788999999988889999999999999999998 999986543110
Q ss_pred HHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 289 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
....+........+...+..+.+|+.+||+.||.+|||+.+++++|..+...
T Consensus 250 --------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 250 --------LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp --------HHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred --------HHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0011111112223444567799999999999999999999999999987643
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=358.44 Aligned_cols=269 Identities=19% Similarity=0.217 Sum_probs=203.1
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
..+.+++.||+|+||+||+|.+.. +++.||||++....... .+.+.+|+.++++++||||+++++++...+..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRD---TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL 79 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCC---CCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEE
Confidence 346688899999999999999987 78999999987654322 3568899999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+++++|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 80 v~e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 80 VFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp EEECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EEEeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 999999999999886 4567999999999999999999999999 999999999999999999999999999865532
Q ss_pred ---CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHhcCcch
Q 009750 227 ---KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIRGKNIL 298 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 298 (527)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......... ........+......
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 24467899999999976 5689999999999999999999999977543211000000 000000000000000
Q ss_pred hhccc-ccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 299 HLMDS-HLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 299 ~~~~~-~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..... ......+ ...+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f 288 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGG
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHH
Confidence 00000 0000000 1245668899999999999999999999998554
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=356.79 Aligned_cols=256 Identities=19% Similarity=0.264 Sum_probs=200.1
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCC-----
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD----- 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----- 143 (527)
.+.+.+.||+|+||.||+|.+.....+++.||||+++...... .+.+.+|+.++++++||||+++++++.+..
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 114 (313)
T 3brb_A 35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP 114 (313)
T ss_dssp GEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------
T ss_pred HeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCc
Confidence 3556778999999999999987655567789999997654322 356999999999999999999999998754
Q ss_pred eeeEEEEecCCCCHhHHhhhc----CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccC
Q 009750 144 ERLLVAEYMPNDTLAKHLFHW----ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
..++||||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg~ 193 (313)
T 3brb_A 115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFGL 193 (313)
T ss_dssp CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecCc
Confidence 359999999999999998532 3457999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHH
Q 009750 220 MKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 220 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
+...... ....+++.|+|||++.+..++.++|||||||++|||++ |..||....... ...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----------~~~-- 260 (313)
T 3brb_A 194 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE-----------MYD-- 260 (313)
T ss_dssp C----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----------HHH--
T ss_pred ceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH-----------HHH--
Confidence 9765432 23346788999999999999999999999999999999 888886543211 001
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.+........+...+..+.+|+.+||..||.+|||+.+++++|+.+..
T Consensus 261 -------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 261 -------YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp -------HHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111111222334455678999999999999999999999999998753
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-45 Score=387.53 Aligned_cols=246 Identities=19% Similarity=0.255 Sum_probs=203.5
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
.||+|+||.||+|.+.... ++..||||+++.... ...+.|.+|+.+|++++|||||+++++|.. +.++|||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSS-CEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCC-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6899999999999886432 567899999987543 346789999999999999999999999976 5699999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-------c
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-------S 228 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-------~ 228 (527)
+|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++...... .
T Consensus 421 ~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 421 PLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp BHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred cHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99999964 3567999999999999999999999999 9999999999999999999999999998754322 1
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
..+|+.|+|||++.+..++.++|||||||+||||+| |+.||.+.+... +...+....+.
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--------------------~~~~i~~~~~~ 558 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--------------------VMAFIEQGKRM 558 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--------------------HHHHHHTTCCC
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------------------HHHHHHcCCCC
Confidence 234578999999998899999999999999999998 999987643211 11111122233
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.++..++..+.+||.+||+.||.+||++.++++.|+.+.
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 345566778999999999999999999999999998764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=367.88 Aligned_cols=271 Identities=20% Similarity=0.248 Sum_probs=210.6
Q ss_pred cccccccCCCCCCCeEEEEEecC-CCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEE--eCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC--DGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--~~~~~~l 147 (527)
.+.+++.||+|+||.||+|++.. ...+++.||||++........+.+.+|+.++++++||||+++++++. +....++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 35578899999999999998532 11278999999998765444567999999999999999999999987 4566899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 227 (527)
||||+++++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 104 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp EEECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred EEeecCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 9999999999999974 2346999999999999999999999999 9999999999999999999999999998654332
Q ss_pred -------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 228 -------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
...+|+.|+|||++.+..++.++|||||||++|+|++|+.||.............. ............
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 256 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE-----RDVPALSRLLEL 256 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC---------CCHHHHHHHH
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc-----cccccHHHHHHH
Confidence 23567889999999988899999999999999999999998754321100000000 000000111122
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
+........+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 222333344556677899999999999999999999999999987643
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=353.46 Aligned_cols=251 Identities=20% Similarity=0.246 Sum_probs=210.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCe
Q 009750 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (527)
Q Consensus 68 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 144 (527)
....+.+++.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 88 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQ---NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR 88 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcC---CCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCE
Confidence 34566788899999999999999987 78899999986532 2335679999999999999999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
.++||||+++|+|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 89 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 89 IYLMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 9999999999999999974 356899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC--CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 225 DG--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 225 ~~--~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.. ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||...+... .. ..+..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----------~~--------~~~~~ 226 (284)
T 2vgo_A 166 SLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-----------TH--------RRIVN 226 (284)
T ss_dssp SSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------HH--------HHHHT
T ss_pred ccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-----------HH--------HHHhc
Confidence 32 34578999999999999899999999999999999999999986542111 00 01111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
. ...++...+..+.+||.+||+.||.+|||+.++++|-+..
T Consensus 227 ~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~ 267 (284)
T 2vgo_A 227 V--DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267 (284)
T ss_dssp T--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHH
T ss_pred c--ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHH
Confidence 1 1123344556789999999999999999999999986543
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=362.37 Aligned_cols=256 Identities=20% Similarity=0.286 Sum_probs=207.6
Q ss_pred cccccccCCCCCCCeEEEEEecCC----CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDG----NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~----~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
.+.+++.||+|+||.||+|.+... ..+++.||||+++..... ..+.+.+|+.+++++ +||||+++++++...+.
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 115 (334)
T 2pvf_A 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115 (334)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSC
T ss_pred HeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCc
Confidence 455778899999999999998531 125778999999765321 245789999999999 89999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCC--------------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWEN--------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
.++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++
T Consensus 116 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~ 194 (334)
T 2pvf_A 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENN 194 (334)
T ss_dssp CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTC
T ss_pred eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCCC
Confidence 9999999999999999975321 24899999999999999999999999 99999999999999999
Q ss_pred CceeecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCcccccccccc
Q 009750 211 DPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 283 (527)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.+...
T Consensus 195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------- 267 (334)
T 2pvf_A 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267 (334)
T ss_dssp CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-------
T ss_pred CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH-------
Confidence 9999999999865543 22345788999999988889999999999999999999 999986542110
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.. ..+........+...+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 268 ----~~---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 268 ----LF---------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp ----HH---------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----HH---------HHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00 1111111222344456678999999999999999999999999998754
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-45 Score=355.94 Aligned_cols=258 Identities=17% Similarity=0.198 Sum_probs=202.3
Q ss_pred cCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCC
Q 009750 67 NNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGD 143 (527)
Q Consensus 67 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 143 (527)
..+..+.+++.||+|+||.||+|.+.. +++.||||++......+ .+.+.+|+.++++++||||+++++++...+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTV---RERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG 107 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETT---TTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcC---CCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC
Confidence 445677788999999999999999987 78999999997654333 357899999999999999999999999999
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
..++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 108 QLYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred eEEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 99999999999999999974 357999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 224 RDG-----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 224 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||...+... ...... ....
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----------~~~~~~-~~~~ 252 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV-----------MGAHIN-QAIP 252 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH-----------HHHHHH-SCCC
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH-----------HHHHhc-cCCC
Confidence 432 24468899999999999899999999999999999999999987542110 000000 0000
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHhccccCC
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP-NTKDLVSTLAPLQNR 348 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-t~~~vl~~L~~~~~~ 348 (527)
.....+...+..+.+|+.+||+.||.+|| +++++++.|+.+...
T Consensus 253 ------~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 253 ------RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp ------CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred ------CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 00112233455688999999999999999 999999999877543
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=354.81 Aligned_cols=256 Identities=15% Similarity=0.139 Sum_probs=206.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++.... ..+.+.+|+.++..+ +|+||+++++++......++||
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 11 HYKVGRRIGEGSFGVIFEGTNLL---NNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TEEEEEEEEECSSCEEEEEEETT---TTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEEeecCCEEEEEEEECC---CCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 35577889999999999999877 88999999986543 345789999999999 8999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC-----ceeecccCccccC
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD-----PRLSCFGLMKNSR 224 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~-----~kl~DFG~a~~~~ 224 (527)
||+ +++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++...
T Consensus 86 e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 86 DLL-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp ECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred Eec-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 999 9999999975 3456999999999999999999999999 999999999999987776 9999999997654
Q ss_pred CC-----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 225 DG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 225 ~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
.. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..... .......
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~--------~~~~~~~ 234 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK--------QKYERIG 234 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH--------HHHHHHH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH--------HHHHHHH
Confidence 32 2446899999999999989999999999999999999999999764321100 0000000
Q ss_pred cCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
........ .. .....+..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 235 ~~~~~~~~-~~----~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 235 EKKQSTPL-RE----LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp HHHHHSCH-HH----HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred hhccCccH-HH----HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 00000000 00 011234678999999999999999999999999998754
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-45 Score=379.99 Aligned_cols=253 Identities=17% Similarity=0.219 Sum_probs=208.9
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||.||+|+++. +|+.||||++.+.. ....+.+.+|+.+|++++||||+++++++.....+|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~---tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 261 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKA---TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC 261 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence 445567789999999999999987 88999999997542 234567899999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcC--CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 147 LVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
|||||++||+|..++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++...
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999999997532 457999999999999999999999999 9999999999999999999999999998754
Q ss_pred CC----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 225 DG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 225 ~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
.. ...+||+.|+|||++.+..++.++|||||||++|||+||+.||.+...... .... ...+
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~----------~~~~-----~~~i 405 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----------NKEL-----KQRV 405 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC----------HHHH-----HHHH
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh----------HHHH-----HHHH
Confidence 43 234889999999999999999999999999999999999999976432110 0000 0011
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHhc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT-----KDLVSTLA 343 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~-----~~vl~~L~ 343 (527)
... ...++...+..+.+||.+||+.||.+||++ .++++|-.
T Consensus 406 ~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpf 451 (543)
T 3c4z_A 406 LEQ--AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451 (543)
T ss_dssp HHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGG
T ss_pred hhc--ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCcc
Confidence 111 122445556788999999999999999965 77887754
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-45 Score=385.23 Aligned_cols=249 Identities=24% Similarity=0.326 Sum_probs=208.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+.+.||+|+||.||+|.+. .+..||||+++... ...+.|.+|+.+|++++|||||++++++.+ +..+|||||
T Consensus 269 ~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 269 LRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred hhhheecccCCCeEEEEEEEC----CCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 446778999999999999997 34669999998654 346789999999999999999999999876 678999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-----
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG----- 226 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~----- 226 (527)
+++|+|.+++.......+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 99999999997544456899999999999999999999999 999999999999999999999999999875432
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....++..|+|||++.+..++.++|||||||+||||+| |+.||.+..... . ...+....
T Consensus 422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~-----------~---------~~~i~~~~ 481 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----------V---------LDQVERGY 481 (535)
T ss_dssp CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH-----------H---------HHHHHTTC
T ss_pred cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------H---------HHHHHcCC
Confidence 23345778999999998899999999999999999999 899986542110 1 11111122
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+...+..++..+.+||.+||+.||++|||+.++++.|+.+..
T Consensus 482 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 482 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 223445566779999999999999999999999999998754
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-45 Score=350.19 Aligned_cols=252 Identities=18% Similarity=0.173 Sum_probs=190.3
Q ss_pred cCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCC
Q 009750 67 NNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143 (527)
Q Consensus 67 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 143 (527)
..+..+.+++.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 84 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIH---TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN 84 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS
T ss_pred cccccceeeeeecCCCceEEEEEEEcc---CCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC
Confidence 445567788899999999999999977 78899999986542 223467999999999999999999999999999
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
..++||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++...
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 99999999999999999974 3467899999999999999999999999 999999999999999999999999999865
Q ss_pred CCC----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 224 RDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 224 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------------------~~~ 223 (278)
T 3cok_A 163 KMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-------------------LNK 223 (278)
T ss_dssp C----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------------
T ss_pred cCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-------------------HHH
Confidence 432 245689999999999988899999999999999999999999865432110 000
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
+... ....+...+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 224 ~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 266 (278)
T 3cok_A 224 VVLA--DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266 (278)
T ss_dssp CCSS--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTT
T ss_pred Hhhc--ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccc
Confidence 1000 011233445678899999999999999999999987554
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=360.79 Aligned_cols=262 Identities=18% Similarity=0.216 Sum_probs=197.3
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+..+.+++.||+|+||+||+|.+.. +++.||||+++...... .+.+.+|+.++++++||||+++++++.+....+
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTV---TNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETT---TTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECC---CCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 4456788899999999999999987 88999999997654322 456889999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe-----CCCCCceeecccCcc
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF-----DENGDPRLSCFGLMK 221 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll-----~~~~~~kl~DFG~a~ 221 (527)
|||||+++ +|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++
T Consensus 110 lv~e~~~~-~L~~~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMD--KNPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEEECCSE-EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEEecCCC-CHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99999985 9999997 3456999999999999999999999999 9999999999999 455569999999997
Q ss_pred ccCCC----CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc--
Q 009750 222 NSRDG----KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG-- 294 (527)
Q Consensus 222 ~~~~~----~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (527)
..... ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+..... .........
T Consensus 186 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-------~~~~~~~~~~~ 258 (329)
T 3gbz_A 186 AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL-------FKIFEVLGLPD 258 (329)
T ss_dssp HHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHHHCCCC
T ss_pred ccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHH-------HHHHHHhCCCc
Confidence 65422 3446799999999998754 899999999999999999999999765422110 000000000
Q ss_pred -Ccc---------hhhcccccCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 295 -KNI---------LHLMDSHLEGN----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 295 -~~~---------~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
... ........... .+...+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 322 (329)
T 3gbz_A 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322 (329)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred hhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCccc
Confidence 000 00000000000 011134678899999999999999999999998654
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=364.50 Aligned_cols=250 Identities=21% Similarity=0.164 Sum_probs=199.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC-----CCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH-----AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+.+++.||+|+||.||+|.+.. +++.||||++... .....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQ---TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred eeecceeeecCCeEEEEEEECC---CCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 4477888999999999999987 8889999998654 2233567999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhc--------------------------------------CCCCcCHHHHHHHHHHHHHHHHHh
Q 009750 147 LVAEYMPNDTLAKHLFHW--------------------------------------ENQTIEWAMRLRVALYIAEALDYC 188 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~i~~aL~~l 188 (527)
|||||+++|+|.+++... ....+++..++.++.||+.||.||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999998521 012346788899999999999999
Q ss_pred hhCCCccccccCCCceEeCCCC--CceeecccCccccCC--------CCccccCCccCCcccccC--CcCCCCcccchhh
Q 009750 189 SSEGRPLYHDLNAYRVLFDENG--DPRLSCFGLMKNSRD--------GKSYSTNLAYTPPEYLRN--GRVTPESVIFSFG 256 (527)
Q Consensus 189 H~~~~ivH~Dlkp~NIll~~~~--~~kl~DFG~a~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslG 256 (527)
|+.+ |+||||||+|||++.++ .+||+|||+++.... .....+|+.|+|||++.+ ..++.++||||||
T Consensus 185 H~~~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG 263 (345)
T 3hko_A 185 HNQG-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263 (345)
T ss_dssp HHTT-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHH
T ss_pred HHCC-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHH
Confidence 9999 99999999999998776 899999999975422 134568999999999975 6689999999999
Q ss_pred HHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC--CCCHHHHHHHHHHHHHhcccCCCCCCC
Q 009750 257 TVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG--NFSSEEATVVFDLASRCLQYEPRERPN 334 (527)
Q Consensus 257 vvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rpt 334 (527)
|++|||++|+.||.+.+.... ...+....... ......++.+.+||.+||+.||.+|||
T Consensus 264 ~il~el~~g~~pf~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 264 VLLHLLLMGAVPFPGVNDADT-------------------ISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHSSCSSCCSSHHHH-------------------HHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHCCCCCCCCChHHH-------------------HHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCC
Confidence 999999999999976432110 01111111111 111224567899999999999999999
Q ss_pred HHHHHHHhcc
Q 009750 335 TKDLVSTLAP 344 (527)
Q Consensus 335 ~~~vl~~L~~ 344 (527)
+.++++|-+.
T Consensus 325 ~~~~l~hp~~ 334 (345)
T 3hko_A 325 AMRALQHPWI 334 (345)
T ss_dssp HHHHHHSHHH
T ss_pred HHHHhcChhh
Confidence 9999998654
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=361.28 Aligned_cols=264 Identities=19% Similarity=0.265 Sum_probs=200.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
..+.+++.||+|+||+||+|.+.. +++.||||++....... ...+.+|+.++++++||||+++++++...+..+||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKL---TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECC---CCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 456688899999999999999987 78899999997554222 23567899999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++ +|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 79 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 79 FEYLDK-DLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp EECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred eccccc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 999975 89998875 3456999999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc---Ccchhh
Q 009750 227 --KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG---KNILHL 300 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 300 (527)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+...... ........ ......
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-------~i~~~~~~~~~~~~~~~ 228 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLH-------FIFRILGTPTEETWPGI 228 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-------HHHHHHCCCCTTTSTTG
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------HHHHHhCCCChHhchhh
Confidence 23467999999999976 568999999999999999999999997754221000 00000000 000000
Q ss_pred cc---------cccCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 301 MD---------SHLEGN----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 301 ~~---------~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.. ...... .....+..+.+|+.+||+.||.+|||+.++++|-+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 287 (324)
T 3mtl_A 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287 (324)
T ss_dssp GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence 00 000000 01123467889999999999999999999999876543
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=368.72 Aligned_cols=247 Identities=19% Similarity=0.262 Sum_probs=199.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCC--CCccceeEEEEEeCCeeeE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLR--HKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~l 147 (527)
+.+++.||+|+||.||+|.+. +++.||||++...... ..+.+.+|+.+|++++ |||||++++++...+.++|
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECT----TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred eEEEEEEccCCCeEEEEEEcC----CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 567888999999999999986 5778999999765432 2357999999999996 5999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||| +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 134 v~E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EEE-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred EEe-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 999 567899999974 457899999999999999999999999 99999999999996 589999999999865432
Q ss_pred -----CccccCCccCCcccccC-----------CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHH
Q 009750 227 -----KSYSTNLAYTPPEYLRN-----------GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALD 290 (527)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 290 (527)
....||+.|+|||++.+ ..++.++||||||||||||++|+.||.......
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-------------- 274 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-------------- 274 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--------------
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH--------------
Confidence 24578999999999865 368889999999999999999999986432100
Q ss_pred HHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 291 MIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
..+..+++......++...+..+.+||.+||+.||.+|||+.++++|.+..
T Consensus 275 ----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~ 325 (390)
T 2zmd_A 275 ----SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325 (390)
T ss_dssp ----HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred ----HHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence 011122222222233333356789999999999999999999999987653
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=355.46 Aligned_cols=258 Identities=17% Similarity=0.184 Sum_probs=200.8
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
+..+.+++.||+|+||.||+|.+.. +++.||||++......+ .+.+.+|+.++++++||||+++++++...+..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 107 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLL---DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETT---TCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcC---CCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence 3456688899999999999999987 78899999998644333 35689999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 146 LLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
++||||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++...
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999998642 3567899999999999999999999999 999999999999999999999999998765
Q ss_pred CCC----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 224 RDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 224 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+...... .........
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---------~~~~~~~~~---- 253 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY---------SLCKKIEQC---- 253 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH---------HHHHHHHTT----
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH---------HHHHHhhcc----
Confidence 432 234678999999999998999999999999999999999999865421110 000111111
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..........+..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 254 ----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 254 ----DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp ----CSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----cCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 11111123345678999999999999999999999999998864
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=351.33 Aligned_cols=252 Identities=18% Similarity=0.189 Sum_probs=206.7
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
..+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++++++||||+++++++......++
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKT---TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcC---CCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 345678889999999999999987 78899999997654322 3568899999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC---ceeecccCccccC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCFGLMKNSR 224 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~---~kl~DFG~a~~~~ 224 (527)
||||+++++|.+.+.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++. +||+|||++....
T Consensus 83 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999998874 456999999999999999999999999 999999999999986655 9999999997665
Q ss_pred CCC---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 225 DGK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 225 ~~~---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
... ...+|+.|+|||++.+..++.++|||||||++|+|++|+.||...+... ..........
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----------~~~~~~~~~~---- 224 (284)
T 3kk8_A 160 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-----------LYAQIKAGAY---- 224 (284)
T ss_dssp SSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHHHHHTCC----
T ss_pred cCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-----------HHHHHHhccc----
Confidence 443 3578999999999999999999999999999999999999986543211 0011111100
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..........++.+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 225 --~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (284)
T 3kk8_A 225 --DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265 (284)
T ss_dssp --CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHH
T ss_pred --cCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccc
Confidence 00111112345678899999999999999999999998654
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=354.93 Aligned_cols=254 Identities=20% Similarity=0.292 Sum_probs=200.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEe-CCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~ 149 (527)
+.+.+.||+|+||+||+|.+.........||||.+...... ..+.+.+|+.++++++||||+++++++.. .+..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 45677899999999999998764435567999998764322 24579999999999999999999999654 56789999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 107 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 184 (298)
T 3f66_A 107 PYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 184 (298)
T ss_dssp ECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred eCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence 99999999999964 4567899999999999999999999999 999999999999999999999999999765432
Q ss_pred -----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCC-CCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 227 -----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK-HIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
....+|+.|+|||++.+..++.++|||||||++|+|++|. +||...+... ....
T Consensus 185 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--------------------~~~~ 244 (298)
T 3f66_A 185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--------------------ITVY 244 (298)
T ss_dssp BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--------------------HHHH
T ss_pred ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--------------------HHHH
Confidence 2335678899999999889999999999999999999955 4554322111 0000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+........+...+..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 245 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 245 LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111112233345678999999999999999999999999998754
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=351.97 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=206.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||+|+||.||+|.+. +++.||||++.... ...+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 14 TLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp GEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred hhhheeeecCCCCeEEEEEEEc----CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 4567888999999999999986 56779999997643 34678999999999999999999999986 456899999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 999999999996433336999999999999999999999999 9999999999999999999999999998755432
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||.+..... .... +...
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----------~~~~---------~~~~ 226 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-----------VIQN---------LERG 226 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------HHHH---------HHTT
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-----------HHHH---------Hhcc
Confidence 2345778999999988889999999999999999999 888886542110 0111 1111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.....+...+..+.+|+.+||+.||++|||+.++++.|+.+..
T Consensus 227 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 227 YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 1122334455678999999999999999999999999988653
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=347.73 Aligned_cols=250 Identities=19% Similarity=0.157 Sum_probs=205.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEeecCCCcEEEEEEECC---CCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 35577889999999999999987 7889999999755433 3567999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---- 225 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~---- 225 (527)
||+++++|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 85 EYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp ECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EecCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 9999999999996 4567999999999999999999999999 99999999999999999999999999875432
Q ss_pred --CCccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 --GKSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....+...
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------~~~~~~~~------- 224 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ----------EYSDWKEK------- 224 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH----------HHHHHHTT-------
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH----------HHHHhhhc-------
Confidence 234568999999999987765 7799999999999999999999965432110 00111100
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..........+..+.+|+.+||+.||.+|||+.++++|.+.
T Consensus 225 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 265 (276)
T 2yex_A 225 -KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265 (276)
T ss_dssp -CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred -ccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccc
Confidence 00011112345678899999999999999999999987553
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-45 Score=353.63 Aligned_cols=251 Identities=20% Similarity=0.256 Sum_probs=203.5
Q ss_pred cccccc-cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVS-ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~-~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+.+ .||+|+||+||+|.+.... +++.||||+++...... .+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus 17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 17 LLTLEDKELGSGNFGTVKKGYYQMKK-VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSS-SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhccCccccccCeeeEeeeecCCC-ceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 344566 7999999999999654322 67899999998654333 46799999999999999999999999 5677899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 227 (527)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999974 456999999999999999999999999 9999999999999999999999999998754432
Q ss_pred -------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 228 -------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||...+... ...
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------------------~~~ 231 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--------------------VTA 231 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------------------HHH
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--------------------HHH
Confidence 1234678999999988889999999999999999999 999986542110 111
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.+........+...+..+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 232 MLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111222344455677999999999999999999999999998764
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=354.04 Aligned_cols=247 Identities=18% Similarity=0.264 Sum_probs=207.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++......++|||
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNR---TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHhhhhcccCCeEEEEEEECC---CCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 4467889999999999999887 788999999976543 345789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+++++|.+++. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 101 ~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 101 YLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp CCTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred eCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 999999999994 467999999999999999999999999 999999999999999999999999999765432
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
....+|+.|+|||++.+..++.++|||||||++|+|++|+.||....... ..... .....
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~~~~---------~~~~~ 236 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK-----------VLFLI---------PKNNP 236 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----------HHHHH---------HHSCC
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH-----------HHHHh---------hcCCC
Confidence 34568999999999999999999999999999999999999986532110 00000 01111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...+...+..+.+|+.+||+.||.+|||+.+++++....
T Consensus 237 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~ 275 (303)
T 3a7i_A 237 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIL 275 (303)
T ss_dssp CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHH
T ss_pred CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhh
Confidence 122333456689999999999999999999999987654
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-45 Score=363.66 Aligned_cols=263 Identities=15% Similarity=0.103 Sum_probs=198.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-----------ChHHHHHHHHHhhcCCCCccceeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-----------DPKQFADEAWGVGKLRHKRLANLIGYC 139 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~~~~ 139 (527)
.+.+++.||+|+||.||+|.+.....++..||||++...... ....+.+|+.+++.++||||+++++++
T Consensus 38 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~ 117 (345)
T 2v62_A 38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSG 117 (345)
T ss_dssp EEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEE
T ss_pred eEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccc
Confidence 456788999999999999999865446788999998765321 123477889999999999999999999
Q ss_pred Ee----CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC--Cce
Q 009750 140 CD----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG--DPR 213 (527)
Q Consensus 140 ~~----~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~--~~k 213 (527)
.. ....+|||||+ +++|.+++.. ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++ .+|
T Consensus 118 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 118 LTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp EEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSEE
T ss_pred ccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcEE
Confidence 88 67899999999 9999999974 348999999999999999999999999 99999999999998887 999
Q ss_pred eecccCccccCCC-----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc
Q 009750 214 LSCFGLMKNSRDG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI 282 (527)
Q Consensus 214 l~DFG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~ 282 (527)
|+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~---- 269 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA---- 269 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH----
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH----
Confidence 9999999764321 2346899999999999989999999999999999999999998542111000
Q ss_pred cchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 283 KFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
......... ......+..... ....+..+.+|+.+||..||.+|||+.++++.|+.+..
T Consensus 270 --~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 270 --VQTAKTNLL-DELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp --HHHHHHHHH-HTTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred --HHHHHHhhc-ccccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 000000000 000000000000 01234578999999999999999999999999987643
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=390.32 Aligned_cols=248 Identities=18% Similarity=0.202 Sum_probs=210.9
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC---CCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH---AWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
+.++.+++.||+|+||.||+|++.. +++.||||++++. .....+.+.+|..+|..+ +||||+++++++.+.+.
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~---~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESS---SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred ccceEEEEEEccCCCEEEEEEEECC---CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 4567788899999999999999987 8899999999754 223456789999999998 79999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
+||||||++||+|..++.. ...+++..++.|+.||+.||.|||+.+ ||||||||+||||+.++++||+|||+++...
T Consensus 417 ~~lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999999974 357999999999999999999999999 9999999999999999999999999998532
Q ss_pred C----CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 225 D----GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 225 ~----~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
. ..+..||+.|+|||++.+..++.++|||||||+||||++|+.||.+.+... ....+
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~-------------------~~~~i 554 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-------------------LFQSI 554 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------------------HHHHH
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH-------------------HHHHH
Confidence 2 235678999999999999999999999999999999999999997643211 01112
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHhc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT-----KDLVSTLA 343 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~-----~~vl~~L~ 343 (527)
+.. ...++...+..+.+||.+||+.||.+||++ ++|++|-.
T Consensus 555 ~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~f 600 (674)
T 3pfq_A 555 MEH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 600 (674)
T ss_dssp HSS--CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGG
T ss_pred HhC--CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCcc
Confidence 211 123455567789999999999999999998 88888754
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=349.61 Aligned_cols=249 Identities=17% Similarity=0.154 Sum_probs=199.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+.+.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERS---SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eeecceeccCCCeEEEEEEEcc---CCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 4467788999999999999987 788999999976543 346789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe---CCCCCceeecccCccccCC
Q 009750 151 YMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 151 ~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~a~~~~~ 225 (527)
|+++|+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++.....
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 99999999998642 3467999999999999999999999999 9999999999999 5568899999999976443
Q ss_pred C---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 G---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
. ....+|+.|+|||++. ..++.++|||||||++|||++|+.||.+.+.... ....... .
T Consensus 180 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~-----------~~~~~~~------~ 241 (285)
T 3is5_A 180 DEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV-----------QQKATYK------E 241 (285)
T ss_dssp -------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----------HHHHHHC------C
T ss_pred cccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH-----------HhhhccC------C
Confidence 2 3457899999999985 5688999999999999999999999976431110 0000000 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..... .....++.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 242 ~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 281 (285)
T 3is5_A 242 PNYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEW 281 (285)
T ss_dssp CCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGG
T ss_pred ccccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence 00000 00113456889999999999999999999998754
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=359.55 Aligned_cols=256 Identities=20% Similarity=0.296 Sum_probs=206.8
Q ss_pred cccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+.+.||+|+||.||+|.+.. ...+++.||||++...... ....+.+|+.++++++||||+++++++.+....++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 105 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence 34577788999999999998762 1115788999999754322 23468999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcC--------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccC
Q 009750 148 VAEYMPNDTLAKHLFHWE--------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~ 184 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 184 (322)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcc
Confidence 999999999999997421 245799999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHH
Q 009750 220 MKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 220 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |..||.+.+... .....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----------~~~~~ 253 (322)
T 1p4o_A 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-----------VLRFV 253 (322)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-----------HHHHH
T ss_pred ccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-----------HHHHH
Confidence 8754332 22345788999999998889999999999999999999 788876532110 01111
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.. ......+...+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 254 ~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 ME---------GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred Hc---------CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11 11112234456678999999999999999999999999998754
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=364.46 Aligned_cols=257 Identities=20% Similarity=0.269 Sum_probs=207.7
Q ss_pred CcccccccCCCCCCCeEEEEEecCCC--CCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 145 (527)
..+.+.+.||+|+||.||+|.+.... ...+.||||++...... ..+.+.+|+.+++++ +||||+++++++...+..
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 125 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence 45567788999999999999987521 12357999999765422 245799999999999 899999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcC------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCce
Q 009750 146 LLVAEYMPNDTLAKHLFHWE------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPR 213 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~k 213 (527)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+|
T Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~k 204 (333)
T 2i1m_A 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAK 204 (333)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEEE
T ss_pred EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeEE
Confidence 99999999999999997431 346899999999999999999999999 99999999999999999999
Q ss_pred eecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchh
Q 009750 214 LSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNF 286 (527)
Q Consensus 214 l~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 286 (527)
|+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||+| |..||.+......
T Consensus 205 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--------- 275 (333)
T 2i1m_A 205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--------- 275 (333)
T ss_dssp BCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH---------
T ss_pred ECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH---------
Confidence 9999999754332 12345778999999998889999999999999999999 8888865422110
Q ss_pred hHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
...++........+...+..+.+|+.+||+.||.+|||+.+++++|+.+.
T Consensus 276 ----------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 276 ----------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp ----------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------HHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 11111111222233344567899999999999999999999999998754
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-45 Score=361.65 Aligned_cols=269 Identities=19% Similarity=0.283 Sum_probs=204.0
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+..+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++++++||||+++++++.+....+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 100 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKD---TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWY 100 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETT---TCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECC---CCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEE
Confidence 3467788899999999999999987 78999999987554322 345889999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++++|..++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 101 lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 101 LVFEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp EEEECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred EEEecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 9999999999988875 4567999999999999999999999999 999999999999999999999999999764432
Q ss_pred ----CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHhcC-c
Q 009750 227 ----KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIRGK-N 296 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~ 296 (527)
....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+.......... ........+... .
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 345689999999999875 689999999999999999999999977543211000000 000000000000 0
Q ss_pred chhhcccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 297 ILHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 297 ~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.............+ ...+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 309 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00000000111111 124567899999999999999999999998754
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=356.27 Aligned_cols=253 Identities=19% Similarity=0.221 Sum_probs=198.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC--CCCccceeEEEEEeC----Ce
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL--RHKRLANLIGYCCDG----DE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~----~~ 144 (527)
.+.+++.||+|+||.||+|.+ .++.||||++.... ...+.+|.+++..+ +||||+++++++... ..
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKW-----RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ceEEEeEeecCCCeEEEEEEE-----CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 345788899999999999987 46789999986432 34566677776665 899999999999887 78
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC--------CCccccccCCCceEeCCCCCceeec
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE--------GRPLYHDLNAYRVLFDENGDPRLSC 216 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~--------~~ivH~Dlkp~NIll~~~~~~kl~D 216 (527)
.++||||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||+|
T Consensus 110 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECC
T ss_pred eEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEe
Confidence 9999999999999999963 4699999999999999999999998 8 99999999999999999999999
Q ss_pred ccCccccCCC--------CccccCCccCCcccccCCcCCCC------cccchhhHHHHHHHhCC----------CCCCCC
Q 009750 217 FGLMKNSRDG--------KSYSTNLAYTPPEYLRNGRVTPE------SVIFSFGTVLLDLLSGK----------HIPPSH 272 (527)
Q Consensus 217 FG~a~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~------~DvwslGvvl~elltg~----------~p~~~~ 272 (527)
||+++..... ....||+.|+|||++.+...+.. +|||||||++|||+||. .||...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 9999765432 23478999999999988776665 99999999999999994 444321
Q ss_pred CccccccccccchhhHHHHHhcCcchhhcccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 273 DMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..... ....... .+........++ ..++..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 266 ~~~~~-------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 266 VPSDP-------SYEDMRE-------IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp SCSSC-------CHHHHHH-------HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCC-------chhhhHH-------HHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 11000 0000000 001111122222 3678889999999999999999999999999998875
Q ss_pred CC
Q 009750 348 RP 349 (527)
Q Consensus 348 ~~ 349 (527)
..
T Consensus 332 ~~ 333 (337)
T 3mdy_A 332 SQ 333 (337)
T ss_dssp TT
T ss_pred hc
Confidence 44
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=362.30 Aligned_cols=266 Identities=16% Similarity=0.204 Sum_probs=198.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCC-----
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD----- 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----- 143 (527)
.+.+++.||+|+||.||+|.+.. +|+.||||++....... .+++.+|+.+|+.++||||+++++++....
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGR---TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp SEEEEEEC------CEEEEEETT---TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred eEEEeEEeeecCCeEEEEEEECC---CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 45678889999999999999987 88999999997543222 357899999999999999999999997653
Q ss_pred -eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 144 -ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 144 -~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
.+++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 7899999964 56899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCC-CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc----cchhhHHHHHhcCc
Q 009750 223 SRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI----KFNFGALDMIRGKN 296 (527)
Q Consensus 223 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 296 (527)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+......... ..............
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~ 257 (367)
T 1cm8_A 178 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257 (367)
T ss_dssp CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred cccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence 6543 45678999999999987 679999999999999999999999998764321100000 00000000000000
Q ss_pred chhh---cccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 ILHL---MDSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~---~~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.... +...... ......++.+.+|+.+||..||.+|||+.++++|-..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f 311 (367)
T 1cm8_A 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311 (367)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHH
Confidence 0000 0000000 1122345678999999999999999999999998653
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=351.90 Aligned_cols=249 Identities=18% Similarity=0.213 Sum_probs=202.7
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecC
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
....||+|+||.||+|.+.. +++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 26 DRVVLGKGTYGIVYAGRDLS---NQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp SBCEEEECSSSEEEEEEETT---TCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CcEEEeecCcEEEEEEEECC---CCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 34467999999999999987 788999999987665556789999999999999999999999999999999999999
Q ss_pred CCCHhHHhhhcC-CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-CCCceeecccCccccCCC----C
Q 009750 154 NDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLMKNSRDG----K 227 (527)
Q Consensus 154 ~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a~~~~~~----~ 227 (527)
+++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++. ++.+||+|||++...... .
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 999999997532 235678999999999999999999999 999999999999987 899999999999865432 3
Q ss_pred ccccCCccCCcccccCCc--CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 SYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~--~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||........ ... .......
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------~~~------~~~~~~~ 243 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA------------AMF------KVGMFKV 243 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH------------HHH------HHHHHCC
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH------------HHH------hhccccc
Confidence 456899999999997654 78899999999999999999999853211100 000 0000111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...+..+.+|+.+||+.||++|||+.+++++-..
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~ 282 (295)
T 2clq_A 244 HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282 (295)
T ss_dssp CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGG
T ss_pred cccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 223344556778999999999999999999999987554
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=368.12 Aligned_cols=247 Identities=19% Similarity=0.205 Sum_probs=194.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--------CChHHHHHHHHHhhcCCCCccceeEEEEEeC
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--------PDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 142 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++..... .....+.+|+.+|++++|||||++++++. .
T Consensus 136 ~y~~~~~LG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 136 EYIMSKTLGSGACGEVKLAFERK---TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp TEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred cEEEEeEEeeCCCeEEEEEEECC---CCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 35577789999999999999987 789999999875421 11235899999999999999999999985 5
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC---CCceeecccC
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCFGL 219 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~ 219 (527)
+..+|||||+++|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred CceEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeeccc
Confidence 56899999999999999986 4567999999999999999999999999 9999999999999754 4599999999
Q ss_pred ccccCCC---CccccCCccCCcccccC---CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 220 MKNSRDG---KSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 220 a~~~~~~---~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
++..... ....||+.|+|||++.+ ..++.++|||||||++|+|+||+.||........ ......
T Consensus 289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~----------~~~~i~ 358 (419)
T 3i6u_A 289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS----------LKDQIT 358 (419)
T ss_dssp TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC----------HHHHHH
T ss_pred ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH----------HHHHHh
Confidence 9876543 34578999999999864 5678899999999999999999999975422110 001011
Q ss_pred cCcchhhcccccCCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 294 GKNILHLMDSHLEGNFSS----EEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.. . ..+.. ..+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 359 ~~---------~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~ 403 (419)
T 3i6u_A 359 SG---------K-YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403 (419)
T ss_dssp TT---------C-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred cC---------C-CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCccc
Confidence 00 0 01111 235678999999999999999999999998653
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=353.41 Aligned_cols=251 Identities=18% Similarity=0.201 Sum_probs=205.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||+|+||.||+|.+.. +++.||||+++.......+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRL---TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceeeeeccCCCCceEEEEEECC---CCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 34577789999999999999987 788999999987654455679999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe---CCCCCceeecccCccccCCC-
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~a~~~~~~- 226 (527)
|+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 163 (304)
T 2jam_A 87 LVSGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163 (304)
T ss_dssp CCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT
T ss_pred cCCCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc
Confidence 9999999999874 356899999999999999999999999 9999999999999 78899999999998765443
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||....... .......... ..
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----------~~~~i~~~~~------~~ 226 (304)
T 2jam_A 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-----------LFEKIKEGYY------EF 226 (304)
T ss_dssp THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----------HHHHHHHCCC------CC
T ss_pred cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-----------HHHHHHcCCC------CC
Confidence 23468999999999999899999999999999999999999986542110 0111111100 01
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
........+..+.+|+.+||..||.+|||+.++++|-+.
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (304)
T 2jam_A 227 ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265 (304)
T ss_dssp CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccc
Confidence 112223445678999999999999999999999998654
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=357.30 Aligned_cols=271 Identities=18% Similarity=0.199 Sum_probs=203.1
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEe-----
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCD----- 141 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----- 141 (527)
++.+.+++.||+|+||.||+|++.. +++.||||++...... ....+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY 92 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETT---TCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred ccceeEEEEEecCCCcEEEEEEECC---CCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence 4567788999999999999999987 8899999998765432 24578999999999999999999999987
Q ss_pred ---CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 142 ---GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 142 ---~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
.+..+|||||+++ +|.+.+.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 93 NRCKGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp ----CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCT
T ss_pred ccCCceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccch
Confidence 3468999999976 78777754 3456999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC--------CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----ch
Q 009750 219 LMKNSRDG--------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FN 285 (527)
Q Consensus 219 ~a~~~~~~--------~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~ 285 (527)
+++..... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||.+.+.......... ..
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 99764321 234679999999999764 589999999999999999999999976542210000000 00
Q ss_pred hhHHHHHhcCcchhhcccccCCCCC--HH-----HHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNFS--SE-----EATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...+...........+......... .. .++.+.+||.+||+.||++|||+.++++|-+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~ 316 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 316 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcC
Confidence 0000000000000000000000000 00 145688999999999999999999999997654
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=365.94 Aligned_cols=264 Identities=13% Similarity=0.111 Sum_probs=202.1
Q ss_pred cccccccCCCCCCCeEEEEEecCCC--CCceEEEEEEcCcCCCC-----------ChHHHHHHHHHhhcCCCCccceeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGN--DNRRWIAVKKFTKHAWP-----------DPKQFADEAWGVGKLRHKRLANLIG 137 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~vAiK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~~ 137 (527)
.+.+++.||+|+||+||+|.+..+. ..++.||||++...... ....+..|+..+..++||||+++++
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~ 115 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG 115 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence 4567889999999999999987631 12578999998754311 0123455666778888999999999
Q ss_pred EEEeC----CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC--CCCC
Q 009750 138 YCCDG----DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD--ENGD 211 (527)
Q Consensus 138 ~~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~--~~~~ 211 (527)
++... ...+|||||+ +++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++ .++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTTC
T ss_pred eeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCCe
Confidence 99775 4589999999 9999999975 4467999999999999999999999999 99999999999999 8899
Q ss_pred ceeecccCccccCCC-----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc
Q 009750 212 PRLSCFGLMKNSRDG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV 280 (527)
Q Consensus 212 ~kl~DFG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~ 280 (527)
+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+......
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~--- 269 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK--- 269 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH---
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH---
Confidence 999999999764322 234589999999999999999999999999999999999999964321100
Q ss_pred cccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 281 PIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
............+..+++..+.. ...+..+.+|+..||..||.+||++.++++.|+.+..
T Consensus 270 ----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 270 ----YVRDSKIRYRENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp ----HHHHHHHHHHHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhhhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 00000001111222333322211 1234568899999999999999999999999987654
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=357.69 Aligned_cols=248 Identities=17% Similarity=0.151 Sum_probs=203.3
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEec
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
+.||+|+||.||+|.+.. +++.||||++...... ....+.+|+.++..+ .||||+++++++......++||||+
T Consensus 35 ~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~ 111 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKS---TGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYA 111 (327)
T ss_dssp EEEEEETTEEEEEEEETT---TCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred ceeCCCCCeEEEEEEECC---CCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEec
Confidence 578999999999999987 7899999999765332 356899999999999 5799999999999999999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC---CCCceeecccCccccCCC---
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG~a~~~~~~--- 226 (527)
++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 112 ~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 190 (327)
T 3lm5_A 112 AGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL 190 (327)
T ss_dssp TTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------
T ss_pred CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcccc
Confidence 9999999997555678999999999999999999999999 999999999999998 789999999999876543
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||...+.... ...... ......
T Consensus 191 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-----------~~~i~~------~~~~~~ 253 (327)
T 3lm5_A 191 REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-----------YLNISQ------VNVDYS 253 (327)
T ss_dssp ---CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----------HHHHHH------TCCCCC
T ss_pred ccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-----------HHHHHh------cccccC
Confidence 345789999999999999999999999999999999999999976432110 000000 001111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.......+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~ 291 (327)
T 3lm5_A 254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291 (327)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGG
T ss_pred chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhh
Confidence 12223455678999999999999999999999998664
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-45 Score=354.70 Aligned_cols=268 Identities=20% Similarity=0.305 Sum_probs=206.4
Q ss_pred ccccccCCCCCCCeEEEEEecC-CCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLL 147 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~l 147 (527)
+.+++.||+|+||.||+|++.. ...+++.||||++..... ...+.+.+|+.++++++||||+++++++... ...++
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 4577889999999999998421 122789999999985543 3457899999999999999999999999876 66899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 227 (527)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 103 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 180 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180 (302)
T ss_dssp EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence 9999999999999964 3456999999999999999999999999 9999999999999999999999999998755432
Q ss_pred -------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 228 -------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
...+|..|+|||++.+..++.++|||||||++|||+||..|+............... ...........
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 255 (302)
T 4e5w_A 181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTH-----GQMTVTRLVNT 255 (302)
T ss_dssp CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCC-----GGGHHHHHHHH
T ss_pred cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcc-----cccCHHHHHHH
Confidence 345678899999999889999999999999999999999875321100000000000 00000111111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
+........+...+..+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 2222233345556678999999999999999999999999998753
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-45 Score=358.34 Aligned_cols=257 Identities=21% Similarity=0.301 Sum_probs=203.2
Q ss_pred cccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+++.||+|+||.||+|.+.. ...+++.||||++..... ....++.+|+.++++++||||+++++++......+|
T Consensus 31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (327)
T 2yfx_A 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 110 (327)
T ss_dssp GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEE
Confidence 45578889999999999999542 112678899999975432 224579999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCC-----CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC---CCCceeecccC
Q 009750 148 VAEYMPNDTLAKHLFHWEN-----QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGL 219 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG~ 219 (527)
||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++. +..+||+|||+
T Consensus 111 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg~ 189 (327)
T 2yfx_A 111 LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGM 189 (327)
T ss_dssp EEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECcccc
Confidence 9999999999999975432 45899999999999999999999999 999999999999984 45699999999
Q ss_pred ccccCC------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHH
Q 009750 220 MKNSRD------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 220 a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
+..... .....+|+.|+|||++.+..++.++|||||||++|+|+| |..||...+... ...
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----------~~~-- 256 (327)
T 2yfx_A 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE-----------VLE-- 256 (327)
T ss_dssp HHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----------HHH--
T ss_pred ccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH-----------HHH--
Confidence 874322 233467889999999988889999999999999999998 888886542110 011
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
.+........+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 257 -------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 257 -------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp -------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -------HHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 1111111223344556789999999999999999999999999987643
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=358.60 Aligned_cols=263 Identities=19% Similarity=0.177 Sum_probs=201.1
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-----hHHHHHHHHHhhcCCCCccceeEEEEEeCCe
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-----PKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-----~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 144 (527)
..+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+++.++||||+++++++.+...
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKN---TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSS---CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred cccEEEeEEeecCCEEEEEEEECC---CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 345577888999999999999987 78899999997543221 2468899999999999999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
.++||||+++ +|..++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 87 ~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp CEEEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred eEEEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 9999999986 89888864 3456899999999999999999999999 9999999999999999999999999998654
Q ss_pred CC----CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC---c
Q 009750 225 DG----KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK---N 296 (527)
Q Consensus 225 ~~----~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 296 (527)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+.+..... .......... .
T Consensus 164 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~-------~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 164 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL-------TRIFETLGTPTEEQ 236 (346)
T ss_dssp SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHHHCCCCTTT
T ss_pred CCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH-------HHHHHHcCCCChhh
Confidence 32 345789999999999764 4889999999999999999999998765422110 0000000000 0
Q ss_pred c---hhhccc---ccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 297 I---LHLMDS---HLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 297 ~---~~~~~~---~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
. ....+. ......+ ...+..+.+||.+||+.||.+|||+.++++|.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~ 296 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhh
Confidence 0 000000 0000111 22356789999999999999999999999987654
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=388.84 Aligned_cols=244 Identities=20% Similarity=0.267 Sum_probs=201.6
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
.||+|+||.||+|.+.... +++.||||+++..... ..+++.+|+.+|++++|||||++++++. .+..+|||||+++
T Consensus 376 ~LG~G~fG~Vy~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 376 ELGSGNFGTVKKGYYQMKK-VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEECSSEEEEEEEEECSS-CEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred EeccCCCEEEEEEEEcCCC-cceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 6899999999999664322 6789999999865332 2468999999999999999999999996 4568999999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-------
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------- 227 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~------- 227 (527)
|+|.+++. ....+++..++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++......
T Consensus 454 g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 99999997 4567999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
...+|+.|+|||++.+..++.++|||||||+||||++ |+.||.+.+.. .+...+.....
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------------------~~~~~i~~~~~ 590 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------------------EVTAMLEKGER 590 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------------------HHHHHHHTTCC
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------------------HHHHHHHcCCC
Confidence 2235678999999998899999999999999999998 99998764311 11111222223
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...+..++..+.+||.+||+.||++|||+.++++.|+.+
T Consensus 591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 334555677899999999999999999999999999865
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-45 Score=358.07 Aligned_cols=257 Identities=19% Similarity=0.246 Sum_probs=206.8
Q ss_pred CcccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcC-CCCccceeEEEEEeCC-e
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGD-E 144 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~-~ 144 (527)
..+.+++.||+|+||.||+|.+.. ...+++.||||+++...... .+.+.+|+.++.++ +||||+++++++...+ .
T Consensus 27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 106 (316)
T 2xir_A 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 106 (316)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCc
Confidence 345678889999999999998643 12277899999997654322 35689999999999 7999999999998754 4
Q ss_pred eeEEEEecCCCCHhHHhhhcCC--------------CCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWEN--------------QTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
.++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~ 185 (316)
T 2xir_A 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKN 185 (316)
T ss_dssp CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGG
T ss_pred eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCC
Confidence 8999999999999999975322 12899999999999999999999999 99999999999999999
Q ss_pred CceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCcccccccccc
Q 009750 211 DPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 283 (527)
.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|||+| |..||.+......
T Consensus 186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~------ 259 (316)
T 2xir_A 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------ 259 (316)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH------
T ss_pred CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH------
Confidence 99999999998654332 2356788999999998899999999999999999998 9999865431110
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.. ..+........+...++.+.+++.+||+.||.+|||+.+++++|+.+.
T Consensus 260 ----~~---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 260 ----FC---------RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp ----HH---------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----HH---------HHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00 111111112233344567899999999999999999999999998765
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=368.70 Aligned_cols=192 Identities=18% Similarity=0.195 Sum_probs=165.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeC-----C
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG-----D 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~ 143 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++...... ..+++.+|+.+|++++||||+++++++... .
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKN---TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CEEEEEEEeecCCEEEEEEEECC---CCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 45678889999999999999987 8899999999764322 245789999999999999999999999776 5
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
..||||||++ |+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp CEEEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 6899999996 59999997 4567999999999999999999999999 999999999999999999999999999865
Q ss_pred CCC--------------------------CccccCCccCCcccc-cCCcCCCCcccchhhHHHHHHHhCCCCC
Q 009750 224 RDG--------------------------KSYSTNLAYTPPEYL-RNGRVTPESVIFSFGTVLLDLLSGKHIP 269 (527)
Q Consensus 224 ~~~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~~DvwslGvvl~elltg~~p~ 269 (527)
... ...++|+.|+|||++ .+..++.++||||||||+|||++|..||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 432 345789999999986 4556999999999999999999854444
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=364.12 Aligned_cols=256 Identities=20% Similarity=0.234 Sum_probs=207.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC----CCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA----WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
..+.+++.||+|+||.||+|+...+..+++.||||+++... ....+.+.+|+.+|+++ +||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 35667888999999999999986544478999999997542 23346788999999999 79999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
.+|||||+++|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999999974 356999999999999999999999999 9999999999999999999999999997643
Q ss_pred CC-----CccccCCccCCcccccCC--cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 225 DG-----KSYSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 225 ~~-----~~~~~t~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
.. ....||+.|+|||++.+. .++.++|||||||+||||++|+.||........ .....
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~----------~~~~~----- 275 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS----------QAEIS----- 275 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC----------HHHHH-----
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch----------HHHHH-----
Confidence 22 235789999999999863 478899999999999999999999865432111 00000
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhccc
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAPL 345 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~~ 345 (527)
..+.. ....++...+..+.+||.+||+.||.+|| |+.++++|....
T Consensus 276 ~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~ 326 (355)
T 1vzo_A 276 RRILK--SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 326 (355)
T ss_dssp HHHHH--CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred HHHhc--cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchh
Confidence 00100 11234445567789999999999999999 999999998754
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=373.63 Aligned_cols=251 Identities=19% Similarity=0.175 Sum_probs=205.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++.... ......+.+|+.+|++++|||||++++++.+...+++|
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRI---TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETT---TCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ceEEeEEEeecCCEEEEEEEECC---CCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 35578899999999999999987 78999999986432 23467899999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC---CCCCceeecccCccccCC
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD---ENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~---~~~~~kl~DFG~a~~~~~ 225 (527)
|||+++|+|.+.+.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++....
T Consensus 100 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 100 GELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 999999999999874 357999999999999999999999999 99999999999995 556799999999986544
Q ss_pred C---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 G---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
. ....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+... ...........
T Consensus 177 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----------~~~~i~~~~~~---- 240 (486)
T 3mwu_A 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-----------ILKRVETGKYA---- 240 (486)
T ss_dssp C----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHHHHHTCCC----
T ss_pred CCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHHHHhCCCC----
Confidence 3 34578999999999975 58999999999999999999999997643211 01111111000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
...+.....+..+.+||.+||+.||.+|||+.++++|-+..
T Consensus 241 --~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~ 281 (486)
T 3mwu_A 241 --FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281 (486)
T ss_dssp --SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHH
T ss_pred --CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhc
Confidence 00011123456789999999999999999999999986643
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-45 Score=351.09 Aligned_cols=254 Identities=18% Similarity=0.219 Sum_probs=205.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEe--CCee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD--GDER 145 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~ 145 (527)
..+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++++++||||+++++++.. ....
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKS---DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hheeeehhccCCCCcEEEEEEECC---CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 456678899999999999999987 78999999997654322 3568999999999999999999998854 5689
Q ss_pred eEEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCCC----ccccccCCCceEeCCCCCceeecccC
Q 009750 146 LLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGR----PLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~~----ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
++||||+++++|.+++... ....+++..++.++.||+.||.|||+.+. ++||||||+|||++.++.+||+|||+
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 9999999999999999742 23459999999999999999999999763 99999999999999999999999999
Q ss_pred ccccCCCC----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 220 MKNSRDGK----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 220 a~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
+....... ...+|+.|+|||++.+..++.++|||||||++|+|++|+.||...+... .......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~~~i~~- 230 (279)
T 2w5a_A 163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-----------LAGKIRE- 230 (279)
T ss_dssp HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHHHHH-
T ss_pred heeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH-----------HHHHHhh-
Confidence 98765443 3467899999999998889999999999999999999999986542110 0011111
Q ss_pred cchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
......+...+..+.+|+.+||+.||.+|||+.+++++++...
T Consensus 231 --------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 231 --------GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp --------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred --------cccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 1111233445677899999999999999999999999887543
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=374.96 Aligned_cols=249 Identities=17% Similarity=0.163 Sum_probs=199.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+++.||+|+||+||+|++.. +++.||||++.+.. ......+.+|+.+++.++|||||+++++|.+...+++||
T Consensus 39 y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 39 YQRVKKLGSGAYGEVLLCRDKV---THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp EEEEEEEECC---EEEEEEETT---TCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eEEeeEEecCCCEEEEEEEECC---CCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5578889999999999999987 78899999997653 233567999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC---CCceeecccCccccCCC
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~a~~~~~~ 226 (527)
||+++|+|.+++.. ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.. +.+||+|||++......
T Consensus 116 e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 116 ECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred ecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 99999999998873 457999999999999999999999999 9999999999999764 55999999999865543
Q ss_pred ---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 ---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
....||+.|+|||++. ..++.++|||||||++|+|++|..||.+.+... ...........
T Consensus 193 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----------~~~~i~~~~~~----- 255 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE-----------ILRKVEKGKYT----- 255 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHHHHHTCCC-----
T ss_pred ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHHHHhCCCC-----
Confidence 3457899999999986 569999999999999999999999997643211 01111111000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.........+..+.+||.+||+.||.+|||+.++++|-+-
T Consensus 256 -~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~ 295 (494)
T 3lij_A 256 -FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295 (494)
T ss_dssp -CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHH
T ss_pred -CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCccc
Confidence 0000112345678999999999999999999999998553
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=359.39 Aligned_cols=266 Identities=23% Similarity=0.288 Sum_probs=208.7
Q ss_pred cccccCCCCCCCeEEEEEecC-CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeC--CeeeEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG--DERLLV 148 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 148 (527)
.+++.||+|+||+||++.... ...+++.||||+++..... ..+.+.+|++++++++||||+++++++.+. ..+++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 477889999999999986542 2237889999999865321 245699999999999999999999999884 678999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||+++|+|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 114 ~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 189 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189 (318)
T ss_dssp ECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred EecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence 999999999999963 35999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
...+|+.|+|||++.+..++.++|||||||++|||+||..||............... ...........+
T Consensus 190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 264 (318)
T 3lxp_A 190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ-----GQMTVLRLTELL 264 (318)
T ss_dssp EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCC-----HHHHHHHHHHHH
T ss_pred ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccc-----cchhHHHHHHHH
Confidence 335678899999999888999999999999999999999987542111000000000 000011122222
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
........+..++..+.+||.+||+.||.+|||+.++++.|+.+..
T Consensus 265 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 265 ERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 3333334455667789999999999999999999999999988753
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=375.86 Aligned_cols=249 Identities=18% Similarity=0.162 Sum_probs=206.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.+++.||+|+||+||+|.+.. +++.||||++.... ....+.+.+|+.++++++|||||++++++.+.+..++|
T Consensus 28 y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 28 YKGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEeeEEecCCCEEEEEEEECC---CCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 5567789999999999999987 88999999997553 23467899999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe---CCCCCceeecccCccccCC
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~a~~~~~ 225 (527)
|||+.+|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 105 ~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 105 GEVYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp ECCCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred EecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999999997 4567999999999999999999999999 9999999999999 5678999999999987654
Q ss_pred CC---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 GK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 ~~---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.. ...||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+... ...........
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----------~~~~i~~~~~~---- 245 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-----------ILKKVEKGKYT---- 245 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHHHHHCCCC----
T ss_pred ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH-----------HHHHHHcCCCC----
Confidence 43 3478999999999975 68999999999999999999999997643211 11111111000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+.....++.+.+||.+||+.||.+|||+.++++|-+.
T Consensus 246 --~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~ 285 (484)
T 3nyv_A 246 --FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 285 (484)
T ss_dssp --CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHH
T ss_pred --CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhh
Confidence 0001112346778999999999999999999999998664
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=351.87 Aligned_cols=250 Identities=19% Similarity=0.224 Sum_probs=200.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||+|+||.||+|.+.. +++.||+|++........+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKE---TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETT---TCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ceeecceeccCCCeEEEEEEEcC---CCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 35578889999999999999987 788999999987766667889999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc----CCC
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS----RDG 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~----~~~ 226 (527)
|+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++... ...
T Consensus 97 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (302)
T 2j7t_A 97 FCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 174 (302)
T ss_dssp CCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-
T ss_pred eCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCcccccccccc
Confidence 9999999999864 3456999999999999999999999999 999999999999999999999999987532 123
Q ss_pred CccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 227 KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
....+|+.|+|||++. +..++.++|||||||++|+|++|+.||...+.... ...... ..
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------~~~~~~-~~----- 238 (302)
T 2j7t_A 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV----------LLKIAK-SD----- 238 (302)
T ss_dssp ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------HHHHHH-SC-----
T ss_pred ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH----------HHHHhc-cC-----
Confidence 3457899999999983 56789999999999999999999999865421100 000000 00
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
......+...+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus 239 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 278 (302)
T 2j7t_A 239 --PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278 (302)
T ss_dssp --CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTT
T ss_pred --CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChH
Confidence 0001123344567899999999999999999999998744
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-44 Score=347.88 Aligned_cols=248 Identities=17% Similarity=0.162 Sum_probs=207.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+.+.||+|+||.||+|.+.. +++.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 16 RYVRGRFLGKGGFAKCFEISDAD---TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEEEEEeecCCEEEEEEEECC---CCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 45577889999999999999987 78899999987654332 3568999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EEECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999999873 457999999999999999999999999 999999999999999999999999999765422
Q ss_pred ---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 ---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
....+|+.|+|||++.+..++.++||||||+++|+|++|+.||....... ... .+...
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----------~~~--------~~~~~ 230 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-----------TYL--------RIKKN 230 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------HHH--------HHHTT
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHH--------HHhhc
Confidence 33568999999999998889999999999999999999999986542110 000 11111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
....+...+..+.+|+.+||+.||++|||+.+++++....
T Consensus 231 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~ 270 (294)
T 2rku_A 231 --EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFT 270 (294)
T ss_dssp --CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred --cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChhee
Confidence 1122334456788999999999999999999999986654
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=348.65 Aligned_cols=248 Identities=17% Similarity=0.213 Sum_probs=200.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEe----CCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCD----GDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~ 145 (527)
+.+...||+|+||+||+|.+.. ++..||+|++...... ..+.+.+|+.++++++||||+++++++.. ...+
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~---~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred EEeeeeccCCCCeEEEEeEecC---CceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 4456679999999999999987 7889999998765332 24568999999999999999999999876 3568
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC-CccccccCCCceEeC-CCCCceeecccCcccc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNS 223 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ivH~Dlkp~NIll~-~~~~~kl~DFG~a~~~ 223 (527)
++||||+++|+|.+++.. ...+++..++.|+.||+.||.|||+.+ +++||||||+|||++ .++.+||+|||++...
T Consensus 105 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999999973 367899999999999999999999985 599999999999998 7899999999999765
Q ss_pred CCC--CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 224 RDG--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 224 ~~~--~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
... ....+|+.|+|||++. +.++.++|||||||++|+|++|+.||........ ........
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----------~~~~~~~~------ 245 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ----------IYRRVTSG------ 245 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH----------HHHHHTTT------
T ss_pred cccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH----------HHHHHhcc------
Confidence 543 2456899999999886 4589999999999999999999999865322110 00111110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.....++...++.+.+||.+||+.||.+|||+.++++|-+
T Consensus 246 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 285 (290)
T 1t4h_A 246 --VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp --CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred --CCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcc
Confidence 0011112223456899999999999999999999998855
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=367.28 Aligned_cols=268 Identities=15% Similarity=0.167 Sum_probs=211.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCC--eeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGD--ERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~l 147 (527)
.+.+.+.||+|+||+||+|++.. +++.||||++..... ...+.+.+|++++++++||||+++++++.... ..+|
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKK---TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred ceEEEEEEEcCCCeEEEEEEECC---CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 35577789999999999999987 789999999976432 34567899999999999999999999998765 7899
Q ss_pred EEEecCCCCHhHHhhhcC-CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe----CCCCCceeecccCccc
Q 009750 148 VAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----DENGDPRLSCFGLMKN 222 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll----~~~~~~kl~DFG~a~~ 222 (527)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 999999999999997532 234999999999999999999999999 9999999999999 7888899999999987
Q ss_pred cCCC---CccccCCccCCcccccC--------CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHH
Q 009750 223 SRDG---KSYSTNLAYTPPEYLRN--------GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 223 ~~~~---~~~~~t~~y~aPE~~~~--------~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...+....... .....
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~------~~~~~ 239 (396)
T 4eut_A 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE------VMYKI 239 (396)
T ss_dssp CCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHH------HHHHH
T ss_pred ccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHH------HHHHH
Confidence 6543 34568999999999865 5678899999999999999999999864322111000 00011
Q ss_pred HhcCcch---hh---------c--ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 292 IRGKNIL---HL---------M--DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 292 ~~~~~~~---~~---------~--~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
....... .+ + .......++...+..+.+++.+||+.||++|||+.++++.+..+...
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 1110000 00 0 00111234577888999999999999999999999999999887643
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=361.59 Aligned_cols=269 Identities=20% Similarity=0.197 Sum_probs=206.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||+|+||+||+|.+.. +++.||+|++...... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 34 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 34 DFEKISELGAGNGGVVFKVSHKP---SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceeeeeecCCCCeEEEEEEECC---CCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 45678889999999999999987 7899999999765322 2457999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCCCceeecccCccccC--CC
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR--DG 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~--~~ 226 (527)
||+++++|.+++.. ...+++..+..++.||+.||.|||+. + |+||||||+|||++.++.+||+|||++.... ..
T Consensus 111 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 187 (360)
T 3eqc_A 111 EHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187 (360)
T ss_dssp CCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC-
T ss_pred ECCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccc
Confidence 99999999999974 35689999999999999999999996 7 9999999999999999999999999986532 23
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc-------------------chhh
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK-------------------FNFG 287 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~-------------------~~~~ 287 (527)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||...+.......... ....
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence 455789999999999999999999999999999999999999976542210000000 0000
Q ss_pred HHHHHhcCcchhhc----ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 288 ALDMIRGKNILHLM----DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 288 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.............+ ............+..+.+||.+||+.||.+|||+.++++|-+.-
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 329 (360)
T 3eqc_A 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 329 (360)
T ss_dssp ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence 00000000000111 11111111122456789999999999999999999999987643
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=367.72 Aligned_cols=197 Identities=18% Similarity=0.193 Sum_probs=174.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC------CCCccceeEEEEEeCCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL------RHKRLANLIGYCCDGDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~~~~~~~~~~ 145 (527)
+.+++.||+|+||+||+|.+.. +++.||||+++... ...+++.+|+.+++.+ +|+||+++++++.....+
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~---~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHK---VHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETT---TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred EEEEEEcccCccEEEEEEEECC---CCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 5578889999999999999987 78999999997532 1235678898888887 577999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC--ceeecccCcccc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD--PRLSCFGLMKNS 223 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~--~kl~DFG~a~~~ 223 (527)
+|||||+. ++|.+++.......+++..++.|+.||+.||.|||+.+ ||||||||+|||++.++. +||+|||+++..
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 99999996 59999998766667999999999999999999999999 999999999999999987 999999999765
Q ss_pred CCC-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCc
Q 009750 224 RDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDM 274 (527)
Q Consensus 224 ~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~ 274 (527)
... .+..+|+.|+|||++.+..++.++|||||||+||||+||++||.+.+.
T Consensus 253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 253 HQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp TCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 543 456789999999999999999999999999999999999999987653
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=351.89 Aligned_cols=261 Identities=16% Similarity=0.234 Sum_probs=188.1
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
...+.+++.||+|+||.||+|.+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAP---KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC-------CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred hhhhhhhheeccccceEEEEEEECC---CCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 3456688899999999999999887 788999999875532 335678999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhc------CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 148 VAEYMPNDTLAKHLFHW------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~------~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
||||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999998631 2456899999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCC---------CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHH
Q 009750 222 NSRDG---------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 222 ~~~~~---------~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
..... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...+.... ....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----------~~~~ 239 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV----------LMLT 239 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH----------HHHH
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH----------HHHH
Confidence 54322 23468999999999976 4689999999999999999999999875432110 0000
Q ss_pred HhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 292 IRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.. ...................+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 240 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~ 291 (303)
T 2vwi_A 240 LQ-NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291 (303)
T ss_dssp HT-SSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC
T ss_pred hc-cCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence 10 00000000000111122334568899999999999999999999997543
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=366.82 Aligned_cols=254 Identities=13% Similarity=0.050 Sum_probs=186.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcC--CCCccceeE-------EEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKL--RHKRLANLI-------GYC 139 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l--~H~nIv~l~-------~~~ 139 (527)
+.+++.||+|+||+||+|.+.. +++.||||++....... .+.+.+|+.+++.| +||||++++ +++
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVE---RLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred eeeeeeccCCCCEEEEEEEECC---CCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 4577889999999999999987 78999999998765422 34577885544444 699988755 555
Q ss_pred EeCC-----------------eeeEEEEecCCCCHhHHhhhcCCCCcCHHHH------HHHHHHHHHHHHHhhhCCCccc
Q 009750 140 CDGD-----------------ERLLVAEYMPNDTLAKHLFHWENQTIEWAMR------LRVALYIAEALDYCSSEGRPLY 196 (527)
Q Consensus 140 ~~~~-----------------~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~------~~i~~~i~~aL~~lH~~~~ivH 196 (527)
...+ .++|||||++ |+|.+++... ...+++..+ +.++.||+.||.|||+++ |+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivH 217 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVH 217 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-Ccc
Confidence 4432 3799999998 7999999753 223455555 678899999999999999 999
Q ss_pred cccCCCceEeCCCCCceeecccCccccCCCC-ccccCCccCCcccccC--CcCCCCcccchhhHHHHHHHhCCCCCCCCC
Q 009750 197 HDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-SYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIPPSHD 273 (527)
Q Consensus 197 ~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~p~~~~~ 273 (527)
|||||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||+||||+||+.||....
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~ 297 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT 297 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCC
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcC
Confidence 9999999999999999999999998776654 5567899999999987 679999999999999999999999997653
Q ss_pred ccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 274 MVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...... +.....................+..+.+||.+||+.||++|||+.++++|-+
T Consensus 298 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 355 (371)
T 3q60_A 298 PGIKGS------------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPE 355 (371)
T ss_dssp TTCTTC------------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHH
T ss_pred cccccc------------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHH
Confidence 221100 0000000001111111112245677899999999999999999999998754
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=349.10 Aligned_cols=249 Identities=16% Similarity=0.201 Sum_probs=203.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++.... ..+.+.+|+.++++++||||+++++++......++|||
T Consensus 30 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 30 VFDVLEKLGEGSYGSVYKAIHKE---TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp CEEEEEECC----CEEEEEEETT---TCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhhheeeccCCCeEEEEEEECC---CCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 45578889999999999999987 78999999997643 45789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
|+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++......
T Consensus 105 ~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (314)
T 3com_A 105 YCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKR 182 (314)
T ss_dssp CCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCB
T ss_pred cCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhcccc
Confidence 9999999999963 3567999999999999999999999999 999999999999999999999999999765433
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
....+|+.|+|||++.+..++.++|||||||++|+|++|+.||...+... ......... ...
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~~~~~~~~-------~~~ 244 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-----------AIFMIPTNP-------PPT 244 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----------HHHHHHHSC-------CCC
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-----------HHHHHhcCC-------Ccc
Confidence 34568899999999999899999999999999999999999986532110 000000000 000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+...+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 245 ~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~ 282 (314)
T 3com_A 245 FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFV 282 (314)
T ss_dssp CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHH
Confidence 11223345678999999999999999999999987654
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=348.72 Aligned_cols=245 Identities=18% Similarity=0.204 Sum_probs=202.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC------ChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
+.+++.||+|+||.||+|.+.. +++.||||+++..... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 7 YEMGEELGSGQFAIVRKCRQKG---TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhHHhhcccCceEEEEEEEcC---CCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 4577889999999999999987 7889999998765322 356799999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC----CceeecccCcc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLMK 221 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~----~~kl~DFG~a~ 221 (527)
++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++ .+||+|||++.
T Consensus 84 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999999999973 457999999999999999999999999 99999999999998877 89999999998
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
..... ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||...+... ........
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~~~~~~~--- 226 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-----------TLTNISAV--- 226 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------HHHHHHTT---
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-----------HHHHhHhc---
Confidence 65443 34468999999999998899999999999999999999999986543110 00101000
Q ss_pred hhcccccCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 299 HLMDSHLEGNFS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 299 ~~~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...++ ...+..+.+|+.+||..||.+|||+.++++|-.
T Consensus 227 -------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 268 (283)
T 3bhy_A 227 -------NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSW 268 (283)
T ss_dssp -------CCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHH
T ss_pred -------ccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHH
Confidence 00111 123456889999999999999999999999743
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=349.28 Aligned_cols=253 Identities=20% Similarity=0.328 Sum_probs=193.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.+.+.||+|+||+||+|.+.. .||||+++...... .+.+.+|+.++++++||||+++++++ .....++|
T Consensus 25 ~y~~~~~lG~G~~g~Vy~~~~~~------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 25 QITVGQRIGSGSFGTVYKGKWHG------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp SCEEEEEEEECSSEEEEEEESSS------EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred ceeeeeEecCCCCeEEEEEEEcC------ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 35577889999999999998753 39999997654322 35799999999999999999999965 55678999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 98 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 98 TQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp EECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999999964 4567999999999999999999999999 999999999999999999999999998754321
Q ss_pred ----CccccCCccCCccccc---CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 227 ----KSYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
....+|+.|+|||++. +..++.++|||||||++|||++|+.||........ ............
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----------~~~~~~~~~~~~ 245 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ----------IIEMVGRGSLSP 245 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH----------HHHHHHHTSCCC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH----------HHHHhcccccCc
Confidence 2346899999999986 56688899999999999999999999865432110 111111111100
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
. .......++..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 246 ----~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 246 ----D-LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp ----C-TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ----c-hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0 011223455779999999999999999999999999998754
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=355.29 Aligned_cols=263 Identities=19% Similarity=0.173 Sum_probs=203.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CCccceeEEEEEe--CCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCD--GDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--~~~~~ 146 (527)
..+.+++.||+|+||+||+|.+.. +++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.+ ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINIT---NNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECC---CCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 346678899999999999999987 7889999998743 3578999999999996 9999999999987 56789
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-CceeecccCccccCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSRD 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~~ 225 (527)
+||||+++++|.+++. .+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++....
T Consensus 110 lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999999884 3899999999999999999999999 99999999999999777 899999999986543
Q ss_pred C---CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhh---HHHHHhc----
Q 009750 226 G---KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG---ALDMIRG---- 294 (527)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~---- 294 (527)
. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||............+..... .......
T Consensus 184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred CCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence 3 34568899999999977 56899999999999999999999998544321110000000000 0000000
Q ss_pred ----------CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 295 ----------KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 295 ----------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...............+...+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f 323 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGG
T ss_pred cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccH
Confidence 00000001111111222346779999999999999999999999998654
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-44 Score=358.13 Aligned_cols=266 Identities=16% Similarity=0.165 Sum_probs=196.8
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCC----
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---- 143 (527)
..+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+++.++||||+++++++....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAI---LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hheeEeeeeEecCCEEEEEEEECC---CCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 356678889999999999999987 78999999997643222 356889999999999999999999997654
Q ss_pred --eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 144 --ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 144 --~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
..++||||+++ +|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ccceEEEEEcCCC-CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 68999999975 7888885 34899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc-----ccch-------h
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP-----IKFN-------F 286 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~-----~~~~-------~ 286 (527)
..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+........ .... .
T Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 255 (371)
T 2xrw_A 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCH
T ss_pred ccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 65543 3457899999999999989999999999999999999999999876432100000 0000 0
Q ss_pred hHHHHHh------cCcchhhcccccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 287 GALDMIR------GKNILHLMDSHLEGN---FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 287 ~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....... ...+...+....... .+...+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 322 (371)
T 2xrw_A 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322 (371)
T ss_dssp HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcch
Confidence 0000000 000001111110000 112346789999999999999999999999998664
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=374.41 Aligned_cols=247 Identities=16% Similarity=0.191 Sum_probs=202.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-------------CChHHHHHHHHHhhcCCCCccceeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-------------PDPKQFADEAWGVGKLRHKRLANLIG 137 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~~ 137 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++..... ...+.+.+|+.+|++++|||||++++
T Consensus 37 ~Y~~~~~lG~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 37 SYFKVRKLGSGAYGEVLLCKEKN---GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp TEEEEEEEEC--CEEEEEEEETT---TCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred ceEEEeEecccCCeEEEEEEECC---CCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35578889999999999999987 788999999976432 22467999999999999999999999
Q ss_pred EEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC---Ccee
Q 009750 138 YCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG---DPRL 214 (527)
Q Consensus 138 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~---~~kl 214 (527)
++.+...++|||||+++|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEE
Confidence 99999999999999999999999974 456999999999999999999999999 99999999999998776 6999
Q ss_pred ecccCccccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHH
Q 009750 215 SCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDM 291 (527)
Q Consensus 215 ~DFG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (527)
+|||++...... ....||+.|+|||++. +.++.++|||||||++|+|++|..||.+.+... ....
T Consensus 191 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----------~~~~ 258 (504)
T 3q5i_A 191 VDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD-----------IIKK 258 (504)
T ss_dssp CCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHH
T ss_pred EECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHH
Confidence 999999876543 3457899999999986 568999999999999999999999997643211 0111
Q ss_pred HhcCcchhhcccccCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 292 IRGKNILHLMDSHLEGNFS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.... .. .++ ...+..+.+||.+||+.||.+|||+.++++|-+..
T Consensus 259 i~~~--------~~--~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~ 306 (504)
T 3q5i_A 259 VEKG--------KY--YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306 (504)
T ss_dssp HHHC--------CC--CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred HHcC--------CC--CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhh
Confidence 1111 00 111 12356789999999999999999999999986643
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=347.55 Aligned_cols=251 Identities=17% Similarity=0.178 Sum_probs=202.9
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC----CCChHHHHHHHHHhhcCCCCccceeEEEEE--eCC
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA----WPDPKQFADEAWGVGKLRHKRLANLIGYCC--DGD 143 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--~~~ 143 (527)
..+.+++.||+|+||.||+|.+.. +++.||||+++... ....+.+.+|+.++++++||||+++++++. +..
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSE---TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ 81 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTT---TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred cceeEeeEEecCCCeEEEEEEECC---CCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence 456678889999999999999987 78899999997542 223567999999999999999999999984 456
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
..++||||++++ |.+++.......+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++...
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 789999999876 888887656678999999999999999999999999 999999999999999999999999999765
Q ss_pred CCC------CccccCCccCCcccccCCc--CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 224 RDG------KSYSTNLAYTPPEYLRNGR--VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 224 ~~~------~~~~~t~~y~aPE~~~~~~--~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
... ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||...+... ........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~~~i~~~ 228 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK-----------LFENIGKG 228 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----------HHHHHHHC
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH-----------HHHHHhcC
Confidence 432 2346799999999997644 4779999999999999999999987542110 01111111
Q ss_pred cchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
...++...+..+.+|+.+||+.||.+|||+.++++|.+...
T Consensus 229 ----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 269 (305)
T 2wtk_C 229 ----------SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269 (305)
T ss_dssp ----------CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred ----------CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence 11223344567889999999999999999999999866543
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-45 Score=358.49 Aligned_cols=251 Identities=18% Similarity=0.202 Sum_probs=199.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEe------C
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD------G 142 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~------~ 142 (527)
..+.+++.||+|+||.||+|.+.. +++.||||++.... ...+.+.+|+.+++++ +||||+++++++.. .
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 99 (326)
T 2x7f_A 24 GIFELVELVGNGTYGQVYKGRHVK---TGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 99 (326)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred CcEEEEEEeccCCCEEEEEEEECC---CCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence 345578889999999999999987 78899999987543 3457899999999999 89999999999987 4
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
...++||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp CEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred ceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 67899999999999999998655567999999999999999999999999 99999999999999999999999999876
Q ss_pred cCCC----CccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 223 SRDG----KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 223 ~~~~----~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
.... ....+|+.|+|||++. +..++.++|||||||++|+|++|+.||...+... ...
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~~--- 244 (326)
T 2x7f_A 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----------ALF--- 244 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----------HHH---
T ss_pred cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-----------HHH---
Confidence 5432 3456899999999997 4568999999999999999999999986532110 000
Q ss_pred cCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.+.........+...+..+.+||.+||..||.+|||+.++++|-..
T Consensus 245 -----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~ 290 (326)
T 2x7f_A 245 -----LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290 (326)
T ss_dssp -----HHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHH
T ss_pred -----HhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHH
Confidence 0000001111122335678899999999999999999999987543
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=351.34 Aligned_cols=255 Identities=20% Similarity=0.257 Sum_probs=197.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+++.||+|+||+||+|.+......+..||||+++..... ..+.+.+|+.++++++||||+++++++.... .++
T Consensus 19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 97 (291)
T 1u46_A 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKM 97 (291)
T ss_dssp GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEE
T ss_pred HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-cee
Confidence 456788999999999999997653324457999999765322 2457899999999999999999999997654 899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 227 (527)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++.......
T Consensus 98 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 175 (291)
T 1u46_A 98 VTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175 (291)
T ss_dssp EEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred eEecccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEccccccccccccc
Confidence 9999999999999975 2356899999999999999999999999 9999999999999999999999999998764432
Q ss_pred -------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchh
Q 009750 228 -------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299 (527)
Q Consensus 228 -------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (527)
...+|+.|+|||++.+..++.++|||||||++|+|++ |+.||...+... .. ..
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----------~~--------~~ 236 (291)
T 1u46_A 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-----------IL--------HK 236 (291)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----------HH--------HH
T ss_pred cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-----------HH--------HH
Confidence 2345778999999988889999999999999999999 999986543110 00 11
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+.........+...+..+.+++.+||+.||.+|||+.++++.|+.++.
T Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 237 IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp HHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 111111122334456779999999999999999999999999998764
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=359.56 Aligned_cols=266 Identities=18% Similarity=0.220 Sum_probs=186.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeC------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG------ 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------ 142 (527)
.+.+++.||+|+||.||+|.+.. +|+.||||++...... ..+.+.+|+.+|+.++||||+++++++...
T Consensus 30 ~y~~~~~lG~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 30 RYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp TEEEEEECC----CCEEEEEETT---TTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEEeeEEeecCCeEEEEEEECC---CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 45678899999999999999987 8899999999764322 245788999999999999999999999754
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
...++||||+ +++|.+++. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC------
T ss_pred CeEEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 5679999999 679999985 357999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCC-CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHhcCc
Q 009750 223 SRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIRGKN 296 (527)
Q Consensus 223 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 296 (527)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||++.+.......... .............
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred ccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 5443 45678999999999987 6789999999999999999999999987653211000000 0000000000000
Q ss_pred chhhcccccC-CCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 ILHLMDSHLE-GNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~~~~~~~-~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+..... ...+ ...++.+.+|+.+||..||.+|||+.++++|-..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~ 315 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhh
Confidence 0000000000 0011 1234678899999999999999999999998654
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=370.76 Aligned_cols=242 Identities=15% Similarity=0.123 Sum_probs=189.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC---CChHHHHHHH---HHhhcCCCCccceeE-------E
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW---PDPKQFADEA---WGVGKLRHKRLANLI-------G 137 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~---~~l~~l~H~nIv~l~-------~ 137 (527)
.+.+++.||+|+||+||+|++.. +++.||||++..... ...+.+.+|+ .+|++++|||||+++ +
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQE---TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-C---CCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred eEEEcceeecCCCEEEEEEEECC---CCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 34457789999999999999876 788999999975432 2346799999 555566899999998 7
Q ss_pred EEEeCC-----------------eeeEEEEecCCCCHhHHhhhcC-----CCCcCHHHHHHHHHHHHHHHHHhhhCCCcc
Q 009750 138 YCCDGD-----------------ERLLVAEYMPNDTLAKHLFHWE-----NQTIEWAMRLRVALYIAEALDYCSSEGRPL 195 (527)
Q Consensus 138 ~~~~~~-----------------~~~lv~E~~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~i~~aL~~lH~~~~iv 195 (527)
++...+ ..+|||||+ +|+|.+++.... ...+++..++.|+.||+.||.|||+++ |+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iv 228 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LV 228 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EE
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-ee
Confidence 766553 278999999 679999997421 123446888899999999999999999 99
Q ss_pred ccccCCCceEeCCCCCceeecccCccccCCC-CccccCCccCCcccccCC-----------cCCCCcccchhhHHHHHHH
Q 009750 196 YHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNG-----------RVTPESVIFSFGTVLLDLL 263 (527)
Q Consensus 196 H~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~~DvwslGvvl~ell 263 (527)
||||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||+
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell 307 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999875543 34456 999999999887 7999999999999999999
Q ss_pred hCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 264 SGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 264 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
||+.||....... ....+... ....+..+.+||.+||+.||.+|||+.++++|-+
T Consensus 308 tg~~Pf~~~~~~~-------------------~~~~~~~~------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 362 (377)
T 3byv_A 308 CADLPITKDAALG-------------------GSEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 362 (377)
T ss_dssp HSSCCC------C-------------------CSGGGGSS------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHH
T ss_pred HCCCCCccccccc-------------------chhhhhhh------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChH
Confidence 9999986532111 11111110 1123456889999999999999999999998743
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=356.30 Aligned_cols=264 Identities=22% Similarity=0.267 Sum_probs=197.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHH--hhcCCCCccceeEEEEEe----
Q 009750 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWG--VGKLRHKRLANLIGYCCD---- 141 (527)
Q Consensus 68 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~---- 141 (527)
++..+.+++.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++.+..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 82 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-----DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD 82 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred ChHHhheeeecccCCCeEEEEEEE-----CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence 445677888999999999999977 56889999987543 3455555555 445899999999987643
Q ss_pred -CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC---------CCccccccCCCceEeCCCCC
Q 009750 142 -GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE---------GRPLYHDLNAYRVLFDENGD 211 (527)
Q Consensus 142 -~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~---------~~ivH~Dlkp~NIll~~~~~ 211 (527)
...++|||||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.
T Consensus 83 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~ 158 (336)
T 3g2f_A 83 GRMEYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGT 158 (336)
T ss_dssp SCEEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSC
T ss_pred CCceEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCc
Confidence 2357899999999999999963 3458999999999999999999999 8 999999999999999999
Q ss_pred ceeecccCccccCCC------------CccccCCccCCcccccC-------CcCCCCcccchhhHHHHHHHhCCCCCCCC
Q 009750 212 PRLSCFGLMKNSRDG------------KSYSTNLAYTPPEYLRN-------GRVTPESVIFSFGTVLLDLLSGKHIPPSH 272 (527)
Q Consensus 212 ~kl~DFG~a~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~DvwslGvvl~elltg~~p~~~~ 272 (527)
+||+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||++|..||...
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 999999999764321 23468999999999987 45678999999999999999997765443
Q ss_pred CccccccccccchhhHHHHHhcCcc---hh-hcccccCCCC------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 273 DMVVWNTVPIKFNFGALDMIRGKNI---LH-LMDSHLEGNF------SSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~------~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
........... ......... .. +........+ ....+..+.+||.+||+.||++|||+.++++.|
T Consensus 239 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L 313 (336)
T 3g2f_A 239 ESVPEYQMAFQ-----TEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERM 313 (336)
T ss_dssp SCCCCCCCTTH-----HHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred cchhHHHHhhh-----cccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHH
Confidence 22111000000 000000000 00 0001111111 234677899999999999999999999999999
Q ss_pred ccccCC
Q 009750 343 APLQNR 348 (527)
Q Consensus 343 ~~~~~~ 348 (527)
+.+...
T Consensus 314 ~~ll~~ 319 (336)
T 3g2f_A 314 AELMMI 319 (336)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 987643
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=356.10 Aligned_cols=261 Identities=19% Similarity=0.304 Sum_probs=207.5
Q ss_pred ccccccCCCCCCCeEEEEEecC-CCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCC--eeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQD-GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD--ERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lv 148 (527)
+.+++.||+|+||.||+|+... ...+++.||||++........+.+.+|+.++++++||||+++++++...+ ..++|
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 4578899999999999998531 11278999999998765444568999999999999999999999987654 78999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 123 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~ 200 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200 (326)
T ss_dssp ECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCS
T ss_pred EECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhcccccc
Confidence 999999999999975 3456999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc-------
Q 009750 228 ------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG------- 294 (527)
Q Consensus 228 ------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 294 (527)
...++..|+|||++.+..++.++|||||||++|||+||..|+...... .......
T Consensus 201 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~------------~~~~~~~~~~~~~~ 268 (326)
T 2w1i_A 201 YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE------------FMRMIGNDKQGQMI 268 (326)
T ss_dssp EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH------------HHHHHCTTCCTHHH
T ss_pred ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH------------HHHhhccccchhhh
Confidence 234567899999999888999999999999999999999886432100 0000000
Q ss_pred -CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 295 -KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
..+...+........+..++..+.+||.+||+.||.+|||+.++++.|+.+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 269 VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111122222222334556678999999999999999999999999998764
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-44 Score=346.36 Aligned_cols=255 Identities=16% Similarity=0.134 Sum_probs=201.3
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEE-EeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYC-CDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lv~E 150 (527)
+.+++.||+|+||.||+|.+.. +++.||||++.... ..+.+.+|+.+++.++|++++..++.+ ......++|||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDIA---AGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred eEEeeeecCCCCeEEEEEEEcC---CCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 4477788999999999999877 88999999876543 234689999999999988877777666 56678899999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe---CCCCCceeecccCccccCCC-
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~a~~~~~~- 226 (527)
|+ +++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 162 (296)
T 4hgt_A 86 LL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp CC-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred cc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence 99 8999999964 3457999999999999999999999999 9999999999999 78999999999999765432
Q ss_pred ----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 227 ----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 227 ----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+...... .........
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--------~~~~~~~~~ 234 (296)
T 4hgt_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ--------KYERISEKK 234 (296)
T ss_dssp TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS--------HHHHHHHHH
T ss_pred cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh--------hhhhhhccc
Confidence 24468999999999999999999999999999999999999997643221100 000000000
Q ss_pred chhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..... ... ....+..+.+|+.+||+.||++|||+.++++.|+.+..
T Consensus 235 ~~~~~-~~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 235 MSTPI-EVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHSCH-HHH----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred ccchh-hhh----hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 00000 000 01224678999999999999999999999999988754
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=363.15 Aligned_cols=258 Identities=19% Similarity=0.223 Sum_probs=198.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeC--------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG-------- 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-------- 142 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++.... ....+|+.+|+.++|||||++++++...
T Consensus 8 ~y~~~~~lG~G~fg~V~~a~~~~---~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 80 (383)
T 3eb0_A 8 KYSLGKTLGTGSFGIVCEVFDIE---SGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP 80 (383)
T ss_dssp TEEEEEEEECC-CEEEEEEEETT---TCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred eEEEEEEEEeccCEEEEEEEECC---CCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence 45577889999999999999987 88999999986543 2345799999999999999999998543
Q ss_pred ------------------------------CeeeEEEEecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhh
Q 009750 143 ------------------------------DERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSS 190 (527)
Q Consensus 143 ------------------------------~~~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~ 190 (527)
...++||||+++ +|.+.+.. .....+++..++.++.||+.||.|||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 159 (383)
T 3eb0_A 81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS 159 (383)
T ss_dssp -----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 348899999985 88887753 245779999999999999999999999
Q ss_pred CCCccccccCCCceEeC-CCCCceeecccCccccCCC---CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhC
Q 009750 191 EGRPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSG 265 (527)
Q Consensus 191 ~~~ivH~Dlkp~NIll~-~~~~~kl~DFG~a~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg 265 (527)
.+ |+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||++.+.. ++.++|||||||++|||++|
T Consensus 160 ~g-i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 238 (383)
T 3eb0_A 160 LG-ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238 (383)
T ss_dssp TT-EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred Cc-CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC
Confidence 99 99999999999997 6889999999999865433 3457899999999988754 89999999999999999999
Q ss_pred CCCCCCCCccccccccccchhhHHHHHhcCc----------chh-----hcccccCCCCCHHHHHHHHHHHHHhcccCCC
Q 009750 266 KHIPPSHDMVVWNTVPIKFNFGALDMIRGKN----------ILH-----LMDSHLEGNFSSEEATVVFDLASRCLQYEPR 330 (527)
Q Consensus 266 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-----~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~ 330 (527)
+.||.+.+...... .......... ... +........++...+..+.+|+.+||+.||.
T Consensus 239 ~~pf~~~~~~~~~~-------~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 239 KPLFSGETSIDQLV-------RIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp SCSSCCSSHHHHHH-------HHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred CCCCCCCChHHHHH-------HHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 99998754321100 0000000000 000 0000000112333456789999999999999
Q ss_pred CCCCHHHHHHHhcc
Q 009750 331 ERPNTKDLVSTLAP 344 (527)
Q Consensus 331 ~Rpt~~~vl~~L~~ 344 (527)
+|||+.++++|-+.
T Consensus 312 ~R~t~~e~l~hp~f 325 (383)
T 3eb0_A 312 LRINPYEAMAHPFF 325 (383)
T ss_dssp GSCCHHHHHTSGGG
T ss_pred hCCCHHHHhcCHHH
Confidence 99999999998553
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=357.62 Aligned_cols=250 Identities=18% Similarity=0.195 Sum_probs=188.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CCccceeEEEEEe--------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCD-------- 141 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~-------- 141 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++........+.+.+|+.++.++. ||||+++++++..
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVG---SGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETT---TCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred eEEEEEEEccCCceEEEEEEECC---CCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 35577889999999999999987 78899999986654444567999999999995 9999999999953
Q ss_pred CCeeeEEEEecCCCCHhHHhhh-cCCCCcCHHHHHHHHHHHHHHHHHhhhCC-CccccccCCCceEeCCCCCceeecccC
Q 009750 142 GDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 142 ~~~~~lv~E~~~~g~L~~~l~~-~~~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
...+++||||+. |+|.+++.. .....+++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 345799999996 699998864 23567999999999999999999999985 499999999999999999999999999
Q ss_pred ccccCCCC----------------ccccCCccCCcccc---cCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc
Q 009750 220 MKNSRDGK----------------SYSTNLAYTPPEYL---RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV 280 (527)
Q Consensus 220 a~~~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~ 280 (527)
++...... ...+|+.|+|||++ .+..++.++|||||||++|||+||+.||......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----- 259 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL----- 259 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-----
Confidence 98654321 33578999999998 5667899999999999999999999998643211
Q ss_pred cccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 281 PIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.+.............+..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 260 ------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 260 ------------------RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------------------HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0111111111112223457899999999999999999999999998764
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=345.96 Aligned_cols=256 Identities=15% Similarity=0.122 Sum_probs=203.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEE-EeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYC-CDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lv~ 149 (527)
.+.+++.||+|+||.||+|++.. +++.||||++.... ..+.+.+|+.+++.++|++++..++++ ......++||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIA---AGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred EEEEEEEEccCCCeEEEEEEEcC---CCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 45577889999999999999877 88999999987544 235799999999999988877766665 5667789999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe---CCCCCceeecccCccccCCC
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~a~~~~~~ 226 (527)
||+ +++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 85 e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 85 ELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp ECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred Eec-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 999 8899999964 3457999999999999999999999999 9999999999999 48899999999999764432
Q ss_pred -----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 227 -----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 227 -----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||...+...... ........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--------~~~~~~~~ 233 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ--------KYERISEK 233 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS--------HHHHHHHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh--------hhhhhccc
Confidence 34468999999999999999999999999999999999999997643211100 00000000
Q ss_pred cchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
..... ... .....+..+.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 234 ~~~~~-~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 280 (296)
T 3uzp_A 234 KMSTP-IEV----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHHSC-HHH----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred ccCCc-hHH----HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence 00000 000 012234668899999999999999999999999998754
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-44 Score=347.45 Aligned_cols=252 Identities=19% Similarity=0.200 Sum_probs=190.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
..+.+++.||+|+||+||+|.+.. +++.||||+++...... .+.+.++..+++.++||||+++++++.+.+..++
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVP---SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecC---CCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 345678899999999999999987 88999999997653222 1234555666888899999999999999999999
Q ss_pred EEEecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 148 VAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
||||+++ +|.+++.. .....+++..++.++.||+.||.|||++ + ++||||||+|||++.++.+||+|||++....
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9999975 88887753 2456799999999999999999999998 8 9999999999999999999999999997654
Q ss_pred CC---CccccCCccCCcccc----cCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 225 DG---KSYSTNLAYTPPEYL----RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 225 ~~---~~~~~t~~y~aPE~~----~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
.. ....+|+.|+|||++ .+..++.++|||||||++|||+||+.||........ . .
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------~--------~ 223 (290)
T 3fme_A 162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ----------Q--------L 223 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH----------H--------H
T ss_pred ccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH----------H--------H
Confidence 43 234689999999996 456689999999999999999999999864321100 0 0
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
............+...+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f 270 (290)
T 3fme_A 224 KQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270 (290)
T ss_dssp HHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHH
T ss_pred HHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccc
Confidence 11111111111122345678999999999999999999999997654
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=366.75 Aligned_cols=257 Identities=23% Similarity=0.254 Sum_probs=196.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeC------Cee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG------DER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~ 145 (527)
+.+++.||+|+||.||+|++.. +++.||||++.... ..+.+|+++|++++|||||+++++|... ..+
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~---~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECC---CCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 4567789999999999999987 78999999986543 2345799999999999999999998642 236
Q ss_pred eEEEEecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC-CCceeecccCccc
Q 009750 146 LLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-GDPRLSCFGLMKN 222 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG~a~~ 222 (527)
++||||+++ +|...+.. .....+++..++.++.||+.||.|||+.+ |+||||||+||||+.+ +.+||+|||+++.
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 799999986 67766643 24567999999999999999999999999 9999999999999965 5689999999986
Q ss_pred cCCC---CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC---
Q 009750 223 SRDG---KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK--- 295 (527)
Q Consensus 223 ~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 295 (527)
.... ....+|+.|+|||++.+. .++.++||||||||||||++|+.||.+.+...... .........
T Consensus 207 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~-------~i~~~lg~p~~~ 279 (420)
T 1j1b_A 207 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV-------EIIKVLGTPTRE 279 (420)
T ss_dssp CCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-------HHHHHHCSCCHH
T ss_pred cccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-------HHHHHhCCCCHH
Confidence 5432 356789999999999765 68999999999999999999999998754321100 000000000
Q ss_pred -------cchhhcccccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 296 -------NILHLMDSHLEG-----NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 296 -------~~~~~~~~~~~~-----~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+.-..... .++...+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f 340 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhh
Confidence 000000000000 0122345778999999999999999999999998654
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=354.03 Aligned_cols=247 Identities=21% Similarity=0.225 Sum_probs=201.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--------hHHHHHHHHHhhcC-CCCccceeEEEEEeC
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------PKQFADEAWGVGKL-RHKRLANLIGYCCDG 142 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--------~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 142 (527)
+.++..||.|+||.||+|.+.. +|+.||||++....... .+.+.+|+.+++++ +||||+++++++...
T Consensus 96 y~~~~~lg~G~~g~Vy~a~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 96 YDPKDVIGRGVSSVVRRCVHRA---TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred cccceEEecCCCEEEEEEEECC---CCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 4566788999999999999987 78899999987654221 24688999999999 899999999999999
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
...+|||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..
T Consensus 173 ~~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~ 249 (365)
T 2y7j_A 173 SFMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCH 249 (365)
T ss_dssp SEEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CEEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccc
Confidence 999999999999999999973 457999999999999999999999999 99999999999999999999999999886
Q ss_pred cCCC---CccccCCccCCcccccC------CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 223 SRDG---KSYSTNLAYTPPEYLRN------GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 223 ~~~~---~~~~~t~~y~aPE~~~~------~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
.... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+... .....
T Consensus 250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-----------~~~~i- 317 (365)
T 2y7j_A 250 LEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL-----------MLRMI- 317 (365)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHHH-
T ss_pred cCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH-----------HHHHH-
Confidence 5543 34578999999999863 358889999999999999999999986532110 00101
Q ss_pred cCcchhhcccccCCCCC--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 294 GKNILHLMDSHLEGNFS--SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.........+ ...+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus 318 -------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 362 (365)
T 2y7j_A 318 -------MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPF 362 (365)
T ss_dssp -------HHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred -------HhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 0000000000 123456889999999999999999999999754
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=366.21 Aligned_cols=255 Identities=16% Similarity=0.149 Sum_probs=202.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCC-CccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH-KRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++..... ..++.+|+++++.|+| ++|..+..++......+|||
T Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 8 KFRLGRKIGSGSFGEIYLGTNIQ---TNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TEECCCCCEECSSCEEEEEEETT---TCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cEEEEEEEeeCCCEEEEEEEECC---CCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 45578889999999999999887 788999998765442 3468999999999976 56666666777888899999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe---CCCCCceeecccCccccCCC
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF---DENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll---~~~~~~kl~DFG~a~~~~~~ 226 (527)
||+ +++|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||| +.++.+||+|||+++.....
T Consensus 83 e~~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 83 DLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp ECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ECC-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 999 8999999964 3567999999999999999999999999 9999999999999 68899999999999865432
Q ss_pred C-----------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 227 K-----------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 227 ~-----------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
. ...||+.|+|||++.+..++.++||||||||||||++|+.||.+....... .........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~--------~~~~~i~~~ 231 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK--------QKYEKISEK 231 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH--------HHHHHHHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH--------HHHHHHhhc
Confidence 2 457899999999999999999999999999999999999999764322110 000001000
Q ss_pred cchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.....+.. + ...++..+.+|+.+||+.||.+||++.+|++.|+.+.
T Consensus 232 ~~~~~~~~-l----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 232 KVATSIEA-L----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp HHHSCHHH-H----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cccccHHH-H----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 00000000 0 0122456899999999999999999999999988764
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=354.67 Aligned_cols=247 Identities=13% Similarity=0.125 Sum_probs=200.2
Q ss_pred cccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC---CCccceeEEEEEeCCee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR---HKRLANLIGYCCDGDER 145 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~ 145 (527)
.+.+++.||+|+||+||+|.+.. ...+++.||||+++.. ...++.+|+.++..++ |+||+++++++...+..
T Consensus 66 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~ 142 (365)
T 3e7e_A 66 LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS 142 (365)
T ss_dssp EEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred EEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence 35567789999999999995322 1117888999999754 3567889999998886 99999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhc---CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-----------CCC
Q 009750 146 LLVAEYMPNDTLAKHLFHW---ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-----------NGD 211 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~---~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-----------~~~ 211 (527)
+|||||+++|+|.+++... ....+++..++.|+.||+.||.|||+.+ ||||||||+|||++. ++.
T Consensus 143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~~ 221 (365)
T 3e7e_A 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSAG 221 (365)
T ss_dssp EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CTT
T ss_pred EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccCC
Confidence 9999999999999999642 3467999999999999999999999999 999999999999998 899
Q ss_pred ceeecccCccccC---CC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccch
Q 009750 212 PRLSCFGLMKNSR---DG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 212 ~kl~DFG~a~~~~---~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 285 (527)
+||+|||+++... .. ....||+.|+|||++.+..++.++|||||||++|||+||+.||...+...+.
T Consensus 222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~------- 294 (365)
T 3e7e_A 222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK------- 294 (365)
T ss_dssp EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-------
T ss_pred EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-------
Confidence 9999999996532 11 3457899999999999999999999999999999999999998543211110
Q ss_pred hhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHhcccc
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRER-PNTKDLVSTLAPLQ 346 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R-pt~~~vl~~L~~~~ 346 (527)
+...... .+ ....+.+++..||+.+|.+| |++.++.+.|+.+.
T Consensus 295 ---------------~~~~~~~-~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 295 ---------------PEGLFRR-LP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp ---------------ECSCCTT-CS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ---------------echhccc-cC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 1111111 11 24567799999999999999 67888888887654
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-44 Score=342.69 Aligned_cols=248 Identities=22% Similarity=0.254 Sum_probs=199.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
..+.+++.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..+
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQL---TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFF 87 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECC---CCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEE
Confidence 356678889999999999999987 78899999986532 234567999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++++|.+++.. ...+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 88 MVMEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999999974 356899999999999999999999999 999999999999999999999999999876543
Q ss_pred ---CccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ---KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ---~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....+|+.|+|||++.+..+ +.++||||||+++|+|++|+.||...+... ........
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----------~~~~~~~~------- 226 (276)
T 2h6d_A 165 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-----------LFKKIRGG------- 226 (276)
T ss_dssp ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHHHHHC-------
T ss_pred cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-----------HHHHhhcC-------
Confidence 24467899999999987765 689999999999999999999986532110 01111110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 227 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~ 265 (276)
T 2h6d_A 227 ---VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWF 265 (276)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHH
T ss_pred ---cccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhh
Confidence 011233345678899999999999999999999998554
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=348.85 Aligned_cols=250 Identities=19% Similarity=0.203 Sum_probs=197.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--------CChHHHHHHHHHhhcCCCCccceeEEEEEeC
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--------PDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 142 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++..... .....+.+|+.++++++||||+++++++...
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERK---TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred ceeEeeEEecCCCEEEEEEEEcC---CCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 35577889999999999999987 789999999875431 1124589999999999999999999998765
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC---ceeecccC
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCFGL 219 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~---~kl~DFG~ 219 (527)
. .++||||+++++|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp S-EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred c-eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 4 899999999999999996 4567999999999999999999999999 999999999999987664 99999999
Q ss_pred ccccCCCC---ccccCCccCCccccc---CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHh
Q 009750 220 MKNSRDGK---SYSTNLAYTPPEYLR---NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIR 293 (527)
Q Consensus 220 a~~~~~~~---~~~~t~~y~aPE~~~---~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (527)
++...... ...+|+.|+|||++. ...++.++|||||||++|+|++|..||........ ......
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----------~~~~~~ 233 (322)
T 2ycf_A 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS----------LKDQIT 233 (322)
T ss_dssp CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC----------HHHHHH
T ss_pred ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH----------HHHHHH
Confidence 98765542 346899999999974 45689999999999999999999999865432110 001011
Q ss_pred cCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 294 GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..... .. .......+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus 234 ~~~~~-~~-----~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~ 277 (322)
T 2ycf_A 234 SGKYN-FI-----PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277 (322)
T ss_dssp HTCCC-CC-----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred hCccc-cC-----chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcC
Confidence 00000 00 0000123567889999999999999999999998754
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-44 Score=363.24 Aligned_cols=266 Identities=14% Similarity=0.148 Sum_probs=205.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC--------CCccceeEEEEE--
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR--------HKRLANLIGYCC-- 140 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~~~~~-- 140 (527)
.+.+++.||+|+||+||+|++.. +++.||||+++... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 38 RYHVIRKLGWGHFSTVWLSWDIQ---GKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred eEEEEEEeeecCCeeEEEEEecC---CCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 46678889999999999999987 78999999997432 22467899999999995 788999999997
Q ss_pred --eCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCC-------
Q 009750 141 --DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENG------- 210 (527)
Q Consensus 141 --~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~------- 210 (527)
.....+|||||+ +++|.+.+.......+++..++.|+.||+.||.|||++ + |+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhh
Confidence 456799999999 56777777654556799999999999999999999998 8 99999999999999775
Q ss_pred ------------------------------------------CceeecccCccccCCC-CccccCCccCCcccccCCcCC
Q 009750 211 ------------------------------------------DPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVT 247 (527)
Q Consensus 211 ------------------------------------------~~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~ 247 (527)
.+||+|||++...... ....+|+.|+|||++.+..++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 271 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYN 271 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCC
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCC
Confidence 8999999999865543 445789999999999999999
Q ss_pred CCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc---------Ccchhhccc---------------
Q 009750 248 PESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG---------KNILHLMDS--------------- 303 (527)
Q Consensus 248 ~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~--------------- 303 (527)
.++|||||||+||||+||+.||...+......... ........... ......+..
T Consensus 272 ~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 272 TPADIWSTACMAFELATGDYLFEPHSGEEYTRDED-HIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp THHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHH-HHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred cHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHH-HHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 99999999999999999999997654321100000 00000000000 000000000
Q ss_pred ----ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 304 ----HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 304 ----~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.....++...+..+.+||.+||+.||++|||+.++++|-+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 394 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 394 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGG
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcc
Confidence 0011345677888999999999999999999999998754
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=352.98 Aligned_cols=251 Identities=18% Similarity=0.210 Sum_probs=200.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhc--CCCCccceeEEEEEeCC----ee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGK--LRHKRLANLIGYCCDGD----ER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~ 145 (527)
+.+++.||+|+||.||+|.+ +++.||||++... ....+.+|++++.. ++||||+++++++.... ..
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 115 (342)
T 1b6c_B 44 IVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115 (342)
T ss_dssp CEEEEEEEEETTEEEEEEEE-----TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred EEEEeeecCCCCcEEEEEEE-----cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence 44677889999999999987 4688999999654 24678899999988 69999999999998876 78
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhh--------hCCCccccccCCCceEeCCCCCceeecc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS--------SEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH--------~~~~ivH~Dlkp~NIll~~~~~~kl~DF 217 (527)
++||||+++|+|.+++.. ..+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+||
T Consensus 116 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 116 WLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp EEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCC
T ss_pred EEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEEC
Confidence 999999999999999963 46999999999999999999999 788 999999999999999999999999
Q ss_pred cCccccCCC--------CccccCCccCCcccccCC------cCCCCcccchhhHHHHHHHhC----------CCCCCCCC
Q 009750 218 GLMKNSRDG--------KSYSTNLAYTPPEYLRNG------RVTPESVIFSFGTVLLDLLSG----------KHIPPSHD 273 (527)
Q Consensus 218 G~a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~DvwslGvvl~elltg----------~~p~~~~~ 273 (527)
|++...... ....+|+.|+|||++.+. .++.++|||||||++|||+|| ..||....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 999764432 234689999999999775 344689999999999999999 55654321
Q ss_pred ccccccccccchhhHHHHHhcCcchhhcccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 274 MVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
..... ...... .+.........+ ...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 272 ~~~~~------~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 272 PSDPS------VEEMRK--------VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp CSSCC------HHHHHH--------HHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCccc------HHHHHH--------HHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 11000 000000 011111222222 35677899999999999999999999999999987653
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=359.51 Aligned_cols=262 Identities=13% Similarity=0.087 Sum_probs=202.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCC-----CceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccce-----------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGND-----NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLAN----------- 134 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~----------- 134 (527)
.+.+++.||+|+||.||+|.+..+.. .++.||||++... +.+.+|+.++++++||||++
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 45677889999999999999986211 2678999998754 46899999999999999988
Q ss_pred ----eEEEEEe-CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC
Q 009750 135 ----LIGYCCD-GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (527)
Q Consensus 135 ----l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~ 209 (527)
+++++.. ....+|||||+ +++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDPE 195 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEETT
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcCC
Confidence 6778876 67899999999 999999998544577999999999999999999999999 9999999999999999
Q ss_pred C--CceeecccCccccCCC-----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccc
Q 009750 210 G--DPRLSCFGLMKNSRDG-----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVV 276 (527)
Q Consensus 210 ~--~~kl~DFG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~ 276 (527)
+ .+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 275 (352)
T 2jii_A 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT 275 (352)
T ss_dssp EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH
Confidence 8 9999999999754321 23478999999999999899999999999999999999999986532110
Q ss_pred cccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCCC
Q 009750 277 WNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRP 349 (527)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~~ 349 (527)
.. ......... .....+.... ......+..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 276 ~~------~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 276 ED------IMKQKQKFV-DKPGPFVGPC---GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp HH------HHHHHHHHH-HSCCCEECTT---SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HH------HHHHHHhcc-CChhhhhhhc---cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 00 000000000 0000000000 000123467899999999999999999999999999876433
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=353.94 Aligned_cols=265 Identities=17% Similarity=0.227 Sum_probs=185.8
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEe--CCeeeEEEEecCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD--GDERLLVAEYMPN 154 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~E~~~~ 154 (527)
.||+|+||+||+|++.++. +++.||||++.... ....+.+|+.+|++++|||||++++++.. ...++|||||+++
T Consensus 28 ~lG~G~~g~Vy~~~~~~~~-~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~ 104 (405)
T 3rgf_A 28 KVGRGTYGHVYKAKRKDGK-DDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 104 (405)
T ss_dssp CCC-----EEEEEEESSSS-CCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred EeeecCCeEEEEEEEccCC-CCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence 6999999999999976432 57889999997543 34578999999999999999999999965 6789999999975
Q ss_pred CCHhHHhhhc-------CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe----CCCCCceeecccCcccc
Q 009750 155 DTLAKHLFHW-------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF----DENGDPRLSCFGLMKNS 223 (527)
Q Consensus 155 g~L~~~l~~~-------~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll----~~~~~~kl~DFG~a~~~ 223 (527)
+|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||| +.++.+||+|||+++..
T Consensus 105 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 182 (405)
T 3rgf_A 105 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182 (405)
T ss_dssp -EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred -CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence 888887532 1235999999999999999999999999 9999999999999 77899999999999865
Q ss_pred CCC-------CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccch--hhHHHHHh
Q 009750 224 RDG-------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN--FGALDMIR 293 (527)
Q Consensus 224 ~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~ 293 (527)
... ....+|+.|+|||++.+. .++.++||||||||+|||++|+.||.+.............. ........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g 262 (405)
T 3rgf_A 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262 (405)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHC
T ss_pred CCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhC
Confidence 432 345789999999999874 48999999999999999999999997654321110000000 00000000
Q ss_pred c---Ccchhh------------cccccCCCCC---------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 294 G---KNILHL------------MDSHLEGNFS---------SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 294 ~---~~~~~~------------~~~~~~~~~~---------~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
. ..+..+ +......... ...+..+.+||.+||+.||.+|||+.++++|-+...
T Consensus 263 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~ 339 (405)
T 3rgf_A 263 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE 339 (405)
T ss_dssp CCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTS
T ss_pred CCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhcc
Confidence 0 000000 0000000000 011456889999999999999999999999977644
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=342.97 Aligned_cols=254 Identities=18% Similarity=0.158 Sum_probs=206.1
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---------hHHHHHHHHHhhcCC-CCccceeEE
Q 009750 68 NFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---------PKQFADEAWGVGKLR-HKRLANLIG 137 (527)
Q Consensus 68 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---------~~~~~~E~~~l~~l~-H~nIv~l~~ 137 (527)
.+..+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.+++++. ||||+++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKP---TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 91 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcC---cCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence 34556678889999999999999987 88999999997653211 246889999999995 999999999
Q ss_pred EEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecc
Q 009750 138 YCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCF 217 (527)
Q Consensus 138 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DF 217 (527)
++......++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 92 TYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCC
T ss_pred eeccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecc
Confidence 99999999999999999999999974 457999999999999999999999999 999999999999999999999999
Q ss_pred cCccccCCC---CccccCCccCCccccc------CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhH
Q 009750 218 GLMKNSRDG---KSYSTNLAYTPPEYLR------NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGA 288 (527)
Q Consensus 218 G~a~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 288 (527)
|++...... ....+|+.|+|||++. ...++.++|||||||++|+|++|+.||...+... .
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----------~ 237 (298)
T 1phk_A 169 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-----------M 237 (298)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------H
T ss_pred cchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH-----------H
Confidence 999765443 3456899999999985 4568899999999999999999999986542110 0
Q ss_pred HHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 289 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......... ..........+..+.+|+.+||+.||.+|||+.++++|-..
T Consensus 238 ~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 287 (298)
T 1phk_A 238 LRMIMSGNY------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287 (298)
T ss_dssp HHHHHHTCC------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred HHHHhcCCc------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHh
Confidence 011111100 00011113445678999999999999999999999987553
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=379.47 Aligned_cols=253 Identities=20% Similarity=0.271 Sum_probs=206.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+.+.||+|+||.||+|.+......+..||||+++...... .+.+.+|+.++++++||||+++++++. .+..++||
T Consensus 391 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~ 469 (656)
T 2j0j_A 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIM 469 (656)
T ss_dssp GEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEE
Confidence 3456778999999999999987654457889999987643222 367999999999999999999999985 46789999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC--
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-- 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 227 (527)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 470 E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 547 (656)
T 2j0j_A 470 ELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 547 (656)
T ss_dssp ECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----
T ss_pred EcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcce
Confidence 99999999999974 3456999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.+... ..... ..
T Consensus 548 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-----------~~~~i---------~~ 607 (656)
T 2j0j_A 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-----------VIGRI---------EN 607 (656)
T ss_dssp ------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----------HHHHH---------HH
T ss_pred eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH-----------HHHHH---------Hc
Confidence 2345678999999988899999999999999999997 888986543111 01111 11
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
......+..++..+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 608 ~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 608 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1122334455677999999999999999999999999998764
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=353.74 Aligned_cols=259 Identities=20% Similarity=0.231 Sum_probs=201.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeC-----Ce
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDG-----DE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 144 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.+|+.++++++||||+++++++... ..
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNL---NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cEEEEEEeecCCCeEEEEEEECC---CCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 45678889999999999999987 78999999997543222 35789999999999999999999999765 36
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
.++||||+++ +|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~iv~e~~~~-~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 105 VYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEEECCSE-EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEcccCc-CHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 8999999975 99999953 46999999999999999999999999 9999999999999999999999999997654
Q ss_pred CC-------CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 225 DG-------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 225 ~~-------~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+....... .........
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-------i~~~~~~~~ 252 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH-------ILGILGSPS 252 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHH-------HHHHHCSCC
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHH-------HHHHhCCCC
Confidence 32 344789999999987654 489999999999999999999999976543211000 000000000
Q ss_pred c-----------hhhccc-ccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 I-----------LHLMDS-HLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~-----------~~~~~~-~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
. ...... ......+ ...+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 317 (364)
T 3qyz_A 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317 (364)
T ss_dssp HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcch
Confidence 0 000000 0000111 2235678999999999999999999999998664
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-43 Score=347.53 Aligned_cols=268 Identities=16% Similarity=0.162 Sum_probs=205.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCc------cceeEEEEEeCCe
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR------LANLIGYCCDGDE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~ 144 (527)
.+.+++.||+|+||.||+|.+... +++.||||+++... ...+.+.+|+.+++.++|+| |+++++++...+.
T Consensus 15 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 15 RYEIVDTLGEGAFGKVVECIDHKA--GGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred ceEEEEEEecCCCeEEEEEEecCC--CCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 466788899999999999998432 67899999997532 22457899999999997654 9999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC----------------
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---------------- 208 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~---------------- 208 (527)
.++||||+ +++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCccccccc
Confidence 99999999 889999998655567999999999999999999999999 999999999999987
Q ss_pred ---CCCceeecccCccccCCC-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc--
Q 009750 209 ---NGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI-- 282 (527)
Q Consensus 209 ---~~~~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~-- 282 (527)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||+..+.........
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 249 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249 (339)
T ss_dssp EESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHH
T ss_pred cccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 678999999999875543 45678999999999999899999999999999999999999998654321100000
Q ss_pred --cchhhHHHHHhcCc------------------chhhccc-ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 283 --KFNFGALDMIRGKN------------------ILHLMDS-HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 283 --~~~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..+........... ....... ..........+..+.+|+.+||+.||.+|||+.++++|
T Consensus 250 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 00000000000000 0000000 00011234567889999999999999999999999988
Q ss_pred hc
Q 009750 342 LA 343 (527)
Q Consensus 342 L~ 343 (527)
-+
T Consensus 330 p~ 331 (339)
T 1z57_A 330 PF 331 (339)
T ss_dssp GG
T ss_pred HH
Confidence 44
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=352.64 Aligned_cols=259 Identities=20% Similarity=0.209 Sum_probs=204.9
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCCh-----------------HHHHHHHHHhhcCCCCcc
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-----------------KQFADEAWGVGKLRHKRL 132 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~-----------------~~~~~E~~~l~~l~H~nI 132 (527)
..+.+++.||+|+||.||+|.+ +++.||||++........ +.+.+|+.++++++||||
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-----DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-----TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred CceEEEEEEcCCCCeEEEEEEc-----CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 4566788999999999999998 568899999875422111 789999999999999999
Q ss_pred ceeEEEEEeCCeeeEEEEecCCCCHhHH------hhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceE
Q 009750 133 ANLIGYCCDGDERLLVAEYMPNDTLAKH------LFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVL 205 (527)
Q Consensus 133 v~l~~~~~~~~~~~lv~E~~~~g~L~~~------l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIl 205 (527)
+++++++.+.+..++||||+++|+|.++ +.......+++..++.++.||+.||.|||+ .+ ++||||||+|||
T Consensus 106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil 184 (348)
T 2pml_X 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNIL 184 (348)
T ss_dssp CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEE
T ss_pred ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEE
Confidence 9999999999999999999999999999 654336789999999999999999999999 88 999999999999
Q ss_pred eCCCCCceeecccCccccCCC--CccccCCccCCcccccCC-cCCC-CcccchhhHHHHHHHhCCCCCCCCCcccccccc
Q 009750 206 FDENGDPRLSCFGLMKNSRDG--KSYSTNLAYTPPEYLRNG-RVTP-ESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP 281 (527)
Q Consensus 206 l~~~~~~kl~DFG~a~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~ 281 (527)
++.++.+||+|||++...... ....+|+.|+|||++.+. .++. ++|||||||++|||++|+.||........
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---- 260 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE---- 260 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH----
T ss_pred EcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH----
Confidence 999999999999999865433 345789999999999887 6666 99999999999999999999976532100
Q ss_pred ccchhhHHHHHhcCcchhh------ccc---ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 282 IKFNFGALDMIRGKNILHL------MDS---HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
............. ... ..........+..+.+|+.+||+.||.+|||+.++++|-..
T Consensus 261 ------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f 326 (348)
T 2pml_X 261 ------LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326 (348)
T ss_dssp ------HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred ------HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence 1111111100000 000 00000113345678999999999999999999999997553
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=346.81 Aligned_cols=263 Identities=21% Similarity=0.227 Sum_probs=203.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcC---CCCccceeEEEEE-----
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKL---RHKRLANLIGYCC----- 140 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~----- 140 (527)
.+.+++.||+|+||.||+|.+... +++.||||+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred ceeeeeeecccccEEEEEEEecCC--CCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 355788899999999999998522 678999999875432 2234678888888877 8999999999997
Q ss_pred eCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCc
Q 009750 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 141 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
.....++||||++ |+|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCccc
Confidence 4567899999998 59999998655566999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC--
Q 009750 221 KNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK-- 295 (527)
Q Consensus 221 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (527)
...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..... ..........
T Consensus 168 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------~~i~~~~~~~~~ 240 (326)
T 1blx_A 168 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-------GKILDVIGLPGE 240 (326)
T ss_dssp CCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-------HHHHHHHCCCCG
T ss_pred ccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH-------HHHHHHcCCCCc
Confidence 765432 3456799999999999999999999999999999999999999765422110 0000000000
Q ss_pred -cch-------hhccc---ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 296 -NIL-------HLMDS---HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 296 -~~~-------~~~~~---~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
... ..+.. .....+....+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~ 300 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccc
Confidence 000 00000 00001223345678899999999999999999999988554
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=347.68 Aligned_cols=252 Identities=20% Similarity=0.258 Sum_probs=198.0
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+..+.+++.||+|+||.||+|.+.. .||||+++.... ...+.+.+|+.++++++||||+++++++.+....+
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG------EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS------SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC------eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence 4556688899999999999999864 299999976532 23457889999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC-
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD- 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~- 225 (527)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++ ++.+||+|||++.....
T Consensus 106 iv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp EECBCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred EEeecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 99999999999999964 3456899999999999999999999999 99999999999998 68999999999765421
Q ss_pred --------CCccccCCccCCcccccC---------CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhH
Q 009750 226 --------GKSYSTNLAYTPPEYLRN---------GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGA 288 (527)
Q Consensus 226 --------~~~~~~t~~y~aPE~~~~---------~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 288 (527)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----------~ 251 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA-----------I 251 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH-----------H
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------H
Confidence 123357899999999875 347889999999999999999999986543110 0
Q ss_pred HHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 289 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
....... ..........+..+.+|+.+||..||.+|||+.++++.|+.+...
T Consensus 252 ~~~~~~~--------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 252 IWQMGTG--------MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp HHHHHTT--------CCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred HHHhccC--------CCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 0001000 000011112345688999999999999999999999999988654
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-43 Score=341.50 Aligned_cols=248 Identities=20% Similarity=0.269 Sum_probs=194.3
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEe----------
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD---------- 141 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~---------- 141 (527)
+.+++.||+|+||.||+|.+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 8 FEEIAVLGQGAFGQVVKARNAL---DSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred chhhheeccCCcEEEEEEEEcC---CCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 4577788999999999999987 78999999986432 224578999999999999999999999865
Q ss_pred ---CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 142 ---GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 142 ---~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
....++||||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCc
Confidence 3568999999999999999975 3456888999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC------------------CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccc
Q 009750 219 LMKNSRDG------------------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNT 279 (527)
Q Consensus 219 ~a~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~ 279 (527)
++...... ....+|+.|+|||++.+. .++.++|||||||++|||++ ||......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~---- 234 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER---- 234 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH----
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH----
Confidence 98765321 234678999999999764 68999999999999999998 44321000
Q ss_pred ccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 280 VPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......... ........++...+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 235 ------~~~~~~~~~------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~ 287 (303)
T 1zy4_A 235 ------VNILKKLRS------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287 (303)
T ss_dssp ------HHHHHHHHS------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCS
T ss_pred ------HHHHHhccc------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCc
Confidence 000010100 01112223444556678999999999999999999999998654
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=357.19 Aligned_cols=263 Identities=21% Similarity=0.264 Sum_probs=194.1
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCe------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE------ 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------ 144 (527)
.+.+++.||+|+||+||+|.+.. +++ ||||++.... ....+|+.+|+.++||||+++++++.....
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~---~~~-~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVE---SDE-VAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT---TEE-EEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECC---CCe-EEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 35577889999999999999985 444 8888886543 223479999999999999999999965443
Q ss_pred eeEEEEecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC-CCCCceeecccCcc
Q 009750 145 RLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLSCFGLMK 221 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~-~~~~~kl~DFG~a~ 221 (527)
+++||||++++ |...+.. .....+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++
T Consensus 113 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 113 LNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 78999999874 4444431 23567999999999999999999999999 99999999999999 79999999999998
Q ss_pred ccCCC---CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHh
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIR 293 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~ 293 (527)
..... ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+.......... .....+...
T Consensus 191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~- 269 (394)
T 4e7w_A 191 ILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM- 269 (394)
T ss_dssp ECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH-
T ss_pred cccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh-
Confidence 65432 356789999999999765 489999999999999999999999987643211000000 000000000
Q ss_pred cCcchh-hccc----ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 294 GKNILH-LMDS----HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 294 ~~~~~~-~~~~----~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...... .+.. .+...++...++.+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 325 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhh
Confidence 000000 0000 00001122345679999999999999999999999998553
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=348.71 Aligned_cols=251 Identities=15% Similarity=0.100 Sum_probs=177.2
Q ss_pred ccccc-cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEe----CCeee
Q 009750 72 DFIVS-ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD----GDERL 146 (527)
Q Consensus 72 ~~~~~-~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~ 146 (527)
+.+++ .||+|+||+||+|.+.. +++.||||++... .....+....++.+.||||+++++++.. ....+
T Consensus 30 y~i~~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 30 YQLSKQVLGLGVNGKVLECFHRR---TGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred eEecceeeeeCCCeEEEEEEECC---CCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 44545 48999999999999987 7899999998642 2223333344566799999999999976 44589
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC---CCCceeecccCcccc
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMKNS 223 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG~a~~~ 223 (527)
|||||+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 9999999999999998655567999999999999999999999999 999999999999976 455999999999865
Q ss_pred CCC--CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 224 RDG--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 224 ~~~--~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||......... ......+.
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---------------~~~~~~~~ 246 (336)
T 3fhr_A 182 TQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS---------------PGMKRRIR 246 (336)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------------
T ss_pred cccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh---------------hhHHHhhh
Confidence 443 3456799999999998888999999999999999999999998654321100 00000000
Q ss_pred c--cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 302 D--SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 302 ~--~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
. ...........+..+.+|+.+||+.||.+|||+.++++|-+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 292 (336)
T 3fhr_A 247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 292 (336)
T ss_dssp ----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence 0 0111111234466789999999999999999999999987643
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=351.86 Aligned_cols=276 Identities=17% Similarity=0.197 Sum_probs=198.5
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-----------hHHHHHHHHHhhcC
Q 009750 59 LADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-----------PKQFADEAWGVGKL 127 (527)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-----------~~~~~~E~~~l~~l 127 (527)
..++....+.|. +++.||+|+||.||+|.+. +++.||||++....... .+.+.+|+.+++++
T Consensus 14 ~~~~~~~~~~y~---~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 86 (362)
T 3pg1_A 14 IAELHAMQSPYT---VQRFISSGSYGAVCAGVDS----EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86 (362)
T ss_dssp HHHHHHTTCSCE---EEEEEEEETTEEEEEEECT----TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhccceE---EeEEeccCCCEEEEEEECC----CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC
Confidence 445555555554 6778899999999999986 57889999997643322 16799999999999
Q ss_pred CCCccceeEEEEEeC-----CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCC
Q 009750 128 RHKRLANLIGYCCDG-----DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202 (527)
Q Consensus 128 ~H~nIv~l~~~~~~~-----~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~ 202 (527)
+||||+++++++... ...++||||++ |+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+
T Consensus 87 ~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~ 163 (362)
T 3pg1_A 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPG 163 (362)
T ss_dssp CCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGG
T ss_pred CCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChH
Confidence 999999999999543 35799999998 588888864 4457999999999999999999999999 999999999
Q ss_pred ceEeCCCCCceeecccCccccCCC---CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccc
Q 009750 203 RVLFDENGDPRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWN 278 (527)
Q Consensus 203 NIll~~~~~~kl~DFG~a~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~ 278 (527)
|||++.++.+||+|||+++..... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.......
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 243 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243 (362)
T ss_dssp GEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred HEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999999999999999754332 34578899999999977 66899999999999999999999999765422110
Q ss_pred ccccc----chhhHHHHHhcCcchhhcccccCC-------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 279 TVPIK----FNFGALDMIRGKNILHLMDSHLEG-------NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 279 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..... .................+...... ......++.+.+||.+||+.||.+|||+.++++|-+.
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f 320 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchh
Confidence 00000 000000000000000111010000 0112235668899999999999999999999998654
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-43 Score=344.69 Aligned_cols=264 Identities=16% Similarity=0.181 Sum_probs=194.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEE----------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC---------- 140 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~---------- 140 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++........+.+.+|+.++++++||||+++++++.
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 12 RYMDLKPLGCGGNGLVFSAVDND---CDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TEEEEEECC-----CEEEEEETT---TTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred ceeEEEEeccCCCeEEEEEEECC---CCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 45678899999999999999987 78999999987654334567999999999999999999999873
Q ss_pred ----eCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC-CCCCceee
Q 009750 141 ----DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLS 215 (527)
Q Consensus 141 ----~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~-~~~~~kl~ 215 (527)
+....++||||++ |+|.+++. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ +++.+||+
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999998 59999994 467999999999999999999999999 99999999999997 56799999
Q ss_pred cccCccccCCC-------CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccc-----cc
Q 009750 216 CFGLMKNSRDG-------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV-----PI 282 (527)
Q Consensus 216 DFG~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~-----~~ 282 (527)
|||+++..... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+....... +.
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999865422 23456889999999865 6789999999999999999999999976542210000 00
Q ss_pred cchhhHHHHHhcCcchhhcccccC-CCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 283 KFNFGALDMIRGKNILHLMDSHLE-GNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
... ....... ......+..... ... ....+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 244 ~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 309 (320)
T 2i6l_A 244 VHE-EDRQELL-SVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309 (320)
T ss_dssp CCH-HHHHHHH-TTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHH
T ss_pred Cch-hhhhhhh-hcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccc
Confidence 000 0000000 000000000000 001 12245678999999999999999999999998654
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=348.73 Aligned_cols=268 Identities=19% Similarity=0.210 Sum_probs=190.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCe------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE------ 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------ 144 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++.... .....+.+|+..+..++||||+++++++.....
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 99 (360)
T 3e3p_A 24 RFQVERMAGQGTFGTVQLGKEKS---TGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI 99 (360)
T ss_dssp TEEEC----------CEEEEETT---TCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred ceEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence 45578889999999999999987 78899999986543 234567888999999999999999999976443
Q ss_pred -eeEEEEecCCCCHhHHhhh--cCCCCcCHHHHHHHHHHHHHHHHHhh--hCCCccccccCCCceEeCC-CCCceeeccc
Q 009750 145 -RLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCS--SEGRPLYHDLNAYRVLFDE-NGDPRLSCFG 218 (527)
Q Consensus 145 -~~lv~E~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~i~~aL~~lH--~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG 218 (527)
.++||||+++ +|...+.. .....+++..+..++.||+.||.||| +.+ |+||||||+|||++. ++.+||+|||
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 7899999987 55554432 24567899999999999999999999 888 999999999999996 8999999999
Q ss_pred CccccCCC---CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHH
Q 009750 219 LMKNSRDG---KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALD 290 (527)
Q Consensus 219 ~a~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~ 290 (527)
+++..... ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+.......... .....+.
T Consensus 178 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
T 3e3p_A 178 SAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLR 257 (360)
T ss_dssp TCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred CceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHH
Confidence 99875543 3456799999999997654 89999999999999999999999976542211000000 0000000
Q ss_pred HHhcCc-chhhccc------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 291 MIRGKN-ILHLMDS------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 291 ~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...... ....... ......+...+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f 318 (360)
T 3e3p_A 258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318 (360)
T ss_dssp HHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGG
T ss_pred hcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccc
Confidence 000000 0000000 00011122356789999999999999999999999998664
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=349.51 Aligned_cols=265 Identities=16% Similarity=0.197 Sum_probs=198.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCee---
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDER--- 145 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~--- 145 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++....... .+.+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKR---SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cEEEEeEEecCCCeEEEEEEECC---CCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 34567789999999999999987 88999999997654322 35789999999999999999999999877654
Q ss_pred ---eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 146 ---LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 146 ---~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
++||||+. ++|.+++. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eeEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 58888874 34999999999999999999999999 99999999999999999999999999986
Q ss_pred cCCC-CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHhcCc
Q 009750 223 SRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIRGKN 296 (527)
Q Consensus 223 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 296 (527)
.... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......... .............
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 273 (371)
T 4exu_A 194 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 273 (371)
T ss_dssp ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHH
T ss_pred cccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhh
Confidence 5543 35678999999999987 6789999999999999999999999976542211000000 0000000000000
Q ss_pred chhhc---ccccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 ILHLM---DSHLEGN---FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~~---~~~~~~~---~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..... ....... .....++.+.+||.+||+.||.+|||+.++++|-+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f 327 (371)
T 4exu_A 274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327 (371)
T ss_dssp HHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred hhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccc
Confidence 00000 0000000 012235678999999999999999999999998664
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=350.42 Aligned_cols=198 Identities=17% Similarity=0.163 Sum_probs=171.9
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CC-----ccceeEEEEEeCC
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HK-----RLANLIGYCCDGD 143 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~~~~~~~~ 143 (527)
..+.+++.||+|+||+||+|.+.. +++.||||+++... ....++.+|+.++..++ |+ +|+++++++...+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRV---EQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeEEEEEEEeecCCEEEEEEEEcC---CCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 345577889999999999999987 78999999997432 12356788999998884 55 4999999999999
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh--CCCccccccCCCceEeC--CCCCceeecccC
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS--EGRPLYHDLNAYRVLFD--ENGDPRLSCFGL 219 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~--~~~ivH~Dlkp~NIll~--~~~~~kl~DFG~ 219 (527)
..+|||||+++ +|.+++.......+++..++.++.||+.||.|||+ .+ ||||||||+|||++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 99999999965 99999986555679999999999999999999995 56 99999999999994 578899999999
Q ss_pred ccccCCC-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCC
Q 009750 220 MKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHD 273 (527)
Q Consensus 220 a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~ 273 (527)
++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.+.+
T Consensus 208 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 208 SCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9876543 45678999999999999999999999999999999999999998754
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-43 Score=348.79 Aligned_cols=259 Identities=17% Similarity=0.186 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeC-----Ce
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDG-----DE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 144 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++...... ....+.+|+.++++++||||+++++++... ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 12 DFQLKSLLGEGAYGVVCSATHKP---TGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred ceEEeeEEcCCCCeEEEEEEECC---CCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 45577789999999999999987 7899999999654321 234688999999999999999999998764 67
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
.++||||+. |+|.+++.. ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 89 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 899999997 589999863 56999999999999999999999999 9999999999999999999999999997654
Q ss_pred CC--------------CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHH
Q 009750 225 DG--------------KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 225 ~~--------------~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+...... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-------~~~ 236 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL-------LIF 236 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-------HHH
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH-------HHH
Confidence 21 12467999999998765 678999999999999999999999997754211000 000
Q ss_pred HHHhcC------------cchhhcccccC-CC-----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 290 DMIRGK------------NILHLMDSHLE-GN-----FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 290 ~~~~~~------------~~~~~~~~~~~-~~-----~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...... .....+..... .. .....+..+.+|+.+||+.||.+|||+.++++|-+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 309 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence 000000 00000000000 00 012345678899999999999999999999998654
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=350.91 Aligned_cols=266 Identities=16% Similarity=0.196 Sum_probs=204.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-----------CCccceeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-----------HKRLANLIGYC 139 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~ 139 (527)
.+.+++.||+|+||+||+|.+.. +++.||||++.... ...+.+.+|+.++++++ ||||+++++++
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 20 RYILVRKLGWGHFSTVWLAKDMV---NNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred eEEEEEeeeecCCeEEEEEEecC---CCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 46678899999999999999987 88999999997432 22457889999999986 89999999999
Q ss_pred EeCC----eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeC------C
Q 009750 140 CDGD----ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFD------E 208 (527)
Q Consensus 140 ~~~~----~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~------~ 208 (527)
...+ ..++||||+ +++|.+++.......+++..++.++.||+.||.|||++ + |+||||||+|||++ .
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTT
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcC
Confidence 8654 789999999 88999999865566799999999999999999999998 8 99999999999994 4
Q ss_pred CCCceeecccCccccCCC-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhh
Q 009750 209 NGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG 287 (527)
Q Consensus 209 ~~~~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 287 (527)
.+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||...+......... ....
T Consensus 174 ~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~-~~~~ 252 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD-HIAQ 252 (373)
T ss_dssp EEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH-HHHH
T ss_pred cceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH-HHHH
Confidence 457999999999865543 45578999999999999999999999999999999999999997653211100000 0000
Q ss_pred HHHHHh------------------cCc------------chhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 009750 288 ALDMIR------------------GKN------------ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKD 337 (527)
Q Consensus 288 ~~~~~~------------------~~~------------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~ 337 (527)
...... ... ...++. ....++...+..+.+||.+||+.||.+|||+.+
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT--EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHH--HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhh--hcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 000000 000 000000 112356778889999999999999999999999
Q ss_pred HHHHhccc
Q 009750 338 LVSTLAPL 345 (527)
Q Consensus 338 vl~~L~~~ 345 (527)
+++|-+..
T Consensus 331 ll~hp~f~ 338 (373)
T 1q8y_A 331 LVNHPWLK 338 (373)
T ss_dssp HHTCGGGT
T ss_pred HhhChhhh
Confidence 99986643
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-43 Score=337.54 Aligned_cols=249 Identities=18% Similarity=0.175 Sum_probs=201.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC--CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++......++|
T Consensus 23 ~y~i~~~lg~G~~g~V~~~~~~~---~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 23 RYNIVCMLGKGSFGEVLKCKDRI---TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cceeeEEEcCCCCEEEEEEEEcC---CCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 35577889999999999999987 78899999987543 23467899999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC---CCceeecccCccccCC
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN---GDPRLSCFGLMKNSRD 225 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~---~~~kl~DFG~a~~~~~ 225 (527)
|||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||++.+ +.+||+|||++.....
T Consensus 100 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 100 GELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EEccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 999999999998863 356899999999999999999999999 9999999999999754 4799999999886554
Q ss_pred CC---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 GK---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 ~~---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
.. ...+|+.|+|||++.+ .++.++||||||+++|+|++|+.||...+... ...........
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----------~~~~~~~~~~~---- 240 (287)
T 2wei_A 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-----------ILKRVETGKYA---- 240 (287)
T ss_dssp CSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHHHHHCCCC----
T ss_pred CCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-----------HHHHHHcCCCC----
Confidence 32 3457889999999875 48999999999999999999999987543111 11111111000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.........+..+.+|+.+||+.||.+|||+.+++++-.
T Consensus 241 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 279 (287)
T 2wei_A 241 --FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279 (287)
T ss_dssp --CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred --CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHH
Confidence 000001233567889999999999999999999999754
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=345.62 Aligned_cols=242 Identities=19% Similarity=0.288 Sum_probs=196.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC------ChHHHHHHHHHhhcC----CCCccceeEEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKL----RHKRLANLIGYCC 140 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~l~~l----~H~nIv~l~~~~~ 140 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++...... ....+.+|+.++.++ +||||+++++++.
T Consensus 32 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 32 EYRLGPLLGKGGFGTVFAGHRLT---DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp -CEEEEEEEEETTEEEEEEECTT---TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred ceEEeeEEEcCCCEEEEEEEEcc---CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 35577888999999999999987 7889999999765432 233567899999999 8999999999999
Q ss_pred eCCeeeEEEEe-cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC-CCCCceeeccc
Q 009750 141 DGDERLLVAEY-MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLSCFG 218 (527)
Q Consensus 141 ~~~~~~lv~E~-~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~-~~~~~kl~DFG 218 (527)
..+..++|||+ +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCS
T ss_pred cCCeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcc
Confidence 99999999999 789999999974 456999999999999999999999999 99999999999999 88999999999
Q ss_pred CccccCCC--CccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC
Q 009750 219 LMKNSRDG--KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK 295 (527)
Q Consensus 219 ~a~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (527)
++...... ....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||.... .
T Consensus 186 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----------------~----- 244 (312)
T 2iwi_A 186 SGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----------------E----- 244 (312)
T ss_dssp SCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------------H-----
T ss_pred hhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----------------H-----
Confidence 99875543 34568999999999977665 458999999999999999999985321 0
Q ss_pred cchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
+... ...++...+..+.+||.+||+.||++|||+.++++|-+..
T Consensus 245 ----~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~ 288 (312)
T 2iwi_A 245 ----ILEA--ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ 288 (312)
T ss_dssp ----HHHT--CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTC
T ss_pred ----Hhhh--ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence 0000 1112334456788999999999999999999999986644
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=343.47 Aligned_cols=252 Identities=18% Similarity=0.216 Sum_probs=182.8
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHH-HhhcCCCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAW-GVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
..+.+++.||+|+||.||+|.+.. +++.||||+++..... ...++.+|+. +++.++||||+++++++...+..++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKP---SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETT---TTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcC---CCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 455678889999999999999987 7899999999765322 2345666666 7788899999999999999999999
Q ss_pred EEEecCCCCHhHHhhh---cCCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 148 VAEYMPNDTLAKHLFH---WENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~---~~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
||||+++ +|.+++.. .....+++..+..++.|++.||.|||+. + ++||||||+|||++.++.+||+|||+++..
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 9999986 88877752 2356799999999999999999999998 8 999999999999999999999999999765
Q ss_pred CCC---CccccCCccCCcccc----cCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 224 RDG---KSYSTNLAYTPPEYL----RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 224 ~~~---~~~~~t~~y~aPE~~----~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
... ....+|+.|+|||++ .+..++.++|||||||++|||++|+.||........ .
T Consensus 177 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------------~ 238 (327)
T 3aln_A 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD------------------Q 238 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------------
T ss_pred ccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH------------------H
Confidence 443 233689999999999 456689999999999999999999999865321100 0
Q ss_pred chhhcc---cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 ILHLMD---SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~~~---~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+.. ..+........+..+.+|+.+||+.||.+|||+.+++++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~ 289 (327)
T 3aln_A 239 LTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289 (327)
T ss_dssp -CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHH
T ss_pred HHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHH
Confidence 001111 011111112345678999999999999999999999987654
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=345.74 Aligned_cols=265 Identities=16% Similarity=0.201 Sum_probs=198.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCe----
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDE---- 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---- 144 (527)
.+.+...||+|+||.||+|.+.. +|+.||||++....... .+.+.+|+.+++.++||||+++++++.....
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 25 TYVSPTHVGSGAYGSVCSAIDKR---SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred eEEEeeeEecCCCeEEEEEEECC---CCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 35567788999999999999987 88999999997653222 3578999999999999999999999987654
Q ss_pred --eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 145 --RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 145 --~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
.++||||+. ++|.+++. ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eeEEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 58888774 34999999999999999999999999 99999999999999999999999999986
Q ss_pred cCCC-CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHhcC-
Q 009750 223 SRDG-KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIRGK- 295 (527)
Q Consensus 223 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~- 295 (527)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+.......... ............
T Consensus 176 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 255 (353)
T 3coi_A 176 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 255 (353)
T ss_dssp --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHH
T ss_pred CCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHH
Confidence 5443 34578999999999977 6789999999999999999999999976542110000000 000000000000
Q ss_pred --cchhhcccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 296 --NILHLMDSHLE---GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 296 --~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.....+..... .......+..+.+||.+||+.||.+|||+.++++|-+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f 309 (353)
T 3coi_A 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309 (353)
T ss_dssp HHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred HHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence 00000000001 11223456779999999999999999999999998654
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=341.47 Aligned_cols=248 Identities=19% Similarity=0.260 Sum_probs=197.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCC--CCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLR--HKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~ 146 (527)
.+.+++.||+|+||.||++.+. +++.||||++...... ..+.+.+|+.++.+++ ||||+++++++......+
T Consensus 29 ~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 29 IYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp EEEEEEEEECCSSEEEEEEECT----TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eEEEEEEecCCCCEEEEEEEcC----CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 3557888999999999999986 5778999999765432 2457899999999996 599999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||| +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+|||+++ +.+||+|||++......
T Consensus 105 lv~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EEEC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred EEEe-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 9999 557899999974 457899999999999999999999999 999999999999974 89999999999865432
Q ss_pred ------CccccCCccCCcccccC-----------CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHH
Q 009750 227 ------KSYSTNLAYTPPEYLRN-----------GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 227 ------~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~------------- 246 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------------- 246 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-------------
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-------------
Confidence 23467999999999875 467889999999999999999999986432110
Q ss_pred HHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 290 DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.....+.+......++...+..+.+|+.+||+.||.+|||+.+++++.+..
T Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~ 297 (313)
T 3cek_A 247 -----SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297 (313)
T ss_dssp -----HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred -----HHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence 001112222222233333456789999999999999999999999987653
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=345.47 Aligned_cols=242 Identities=20% Similarity=0.307 Sum_probs=202.3
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC------ChHHHHHHHHHhhcCC--CCccceeEEEEEe
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLR--HKRLANLIGYCCD 141 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~ 141 (527)
..+.+++.||+|+||.||+|.+.. +++.||||++...... ..+.+.+|+.++++++ ||||+++++++..
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 43 SQYQVGPLLGSGGFGSVYSGIRVS---DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp TTEEEEEECSSSSSCEEEEEEETT---TTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CceEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 446678899999999999999987 8899999999765432 2356888999999996 5999999999999
Q ss_pred CCeeeEEEEecCC-CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC-CCCCceeecccC
Q 009750 142 GDERLLVAEYMPN-DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD-ENGDPRLSCFGL 219 (527)
Q Consensus 142 ~~~~~lv~E~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~-~~~~~kl~DFG~ 219 (527)
.+..++|||++.+ ++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ +++.+||+|||+
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred CCcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 9999999999986 899999974 467899999999999999999999999 99999999999999 789999999999
Q ss_pred ccccCCC--CccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 220 MKNSRDG--KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 220 a~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
++..... ....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||...+ ......
T Consensus 197 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----------------~~~~~~- 259 (320)
T 3a99_A 197 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------------EIIRGQ- 259 (320)
T ss_dssp CEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------------HHHHCC-
T ss_pred ccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----------------hhhccc-
Confidence 9876543 34568999999999987665 678999999999999999999985421 001000
Q ss_pred chhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..++...+..+.+||.+||+.||.+|||+.+++++-+.
T Consensus 260 ----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~ 297 (320)
T 3a99_A 260 ----------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297 (320)
T ss_dssp ----------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred ----------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhh
Confidence 01122334668899999999999999999999998654
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=345.14 Aligned_cols=270 Identities=16% Similarity=0.122 Sum_probs=204.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCc------cceeEEEEEeCCe
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR------LANLIGYCCDGDE 144 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~ 144 (527)
.+.+++.||+|+||+||+|.+... +++.||||+++... ...+.+.+|+.++++++|++ |+.+++++...+.
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 20 RYEIVGNLGEGTFGKVVECLDHAR--GKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cEEEEEEeeccCCeEEEEEEecCC--CceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 456788899999999999998762 33789999997432 22457889999999997766 9999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEe------------------
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLF------------------ 206 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll------------------ 206 (527)
.+|||||+ +++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeccccccccccccccccc
Confidence 99999999 667888887655567999999999999999999999999 9999999999999
Q ss_pred -CCCCCceeecccCccccCCC-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc--
Q 009750 207 -DENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI-- 282 (527)
Q Consensus 207 -~~~~~~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~-- 282 (527)
+.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||...+.........
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 254 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKI 254 (355)
T ss_dssp EESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 56789999999999865543 45678999999999999999999999999999999999999997654221000000
Q ss_pred --cchhhHHHHHhcCcc------------------hhhccc-ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 283 --KFNFGALDMIRGKNI------------------LHLMDS-HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 283 --~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..+............ ...... ..........+..+.+||.+||+.||.+|||+.++++|
T Consensus 255 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 255 LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000000000000 000000 00011223456789999999999999999999999988
Q ss_pred hccc
Q 009750 342 LAPL 345 (527)
Q Consensus 342 L~~~ 345 (527)
-+.-
T Consensus 335 p~f~ 338 (355)
T 2eu9_A 335 PFFA 338 (355)
T ss_dssp GGGG
T ss_pred hhhc
Confidence 6543
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=326.55 Aligned_cols=230 Identities=14% Similarity=0.105 Sum_probs=185.1
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
.+.+++.||+|+||.||+|.+.. +++.||||++......+ .+.+.+|+.++.+++||||+++++++.+.+..||
T Consensus 32 ~y~i~~~lg~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 32 RYRLLIFHGGVPPLQFWQALDTA---LDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TEEEEEEEEBSTTCEEEEEEETT---TTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cEEEEEEEcccCCeEEEEEEecC---CCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 35577889999999999999987 78999999998765443 2579999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 227 (527)
||||++|++|.+++.. + ....++..|+.||+.||.|||+++ |+||||||+|||++.++.+||+++|
T Consensus 109 v~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp EEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc---------
Confidence 9999999999999952 2 355678899999999999999999 9999999999999999999998554
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC-
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE- 306 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 306 (527)
|++ .++.++|||||||++|||+||+.||.+.+....... ....+.....
T Consensus 175 -------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~----------------~~~~~~~~~~~ 224 (286)
T 3uqc_A 175 -------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP----------------AERDTAGQPIE 224 (286)
T ss_dssp -------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE----------------CCBCTTSCBCC
T ss_pred -------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH----------------HHHHhccCCCC
Confidence 333 378899999999999999999999976542210000 0000000000
Q ss_pred -CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 307 -GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 307 -~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
.......+..+.+|+.+||+.||.+| |+.++++.|+.+...
T Consensus 225 ~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 225 PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 00112345678999999999999999 999999999987653
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-42 Score=336.64 Aligned_cols=252 Identities=18% Similarity=0.213 Sum_probs=182.8
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+..+.+++.||+|+||.||+|.+.. +++.||||++....... .+.+.++..+++.++||||+++++++...+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 100 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRK---TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF 100 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETT---TCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hccccccceeeecCCeeEEEEEEec---CCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence 3456678899999999999999987 78899999997654222 123455556788889999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
+||||+ ++.+..+... ....+++..++.++.||+.||.|||+. + ++||||||+|||++.++.+||+|||++.....
T Consensus 101 lv~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 101 IAMELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EEECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEEecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 999999 5455555532 456799999999999999999999995 8 99999999999999999999999999876543
Q ss_pred C---CccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 226 G---KSYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 226 ~---~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
. ....+|+.|+|||++. +..++.++|||||||++|||++|+.||........ ..........
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----------~~~~~~~~~~ 247 (318)
T 2dyl_A 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE----------VLTKVLQEEP 247 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH----------HHHHHHHSCC
T ss_pred CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH----------HHHHHhccCC
Confidence 3 2346899999999994 45688999999999999999999999865321100 0111100000
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
... ......+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus 248 -----~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 286 (318)
T 2dyl_A 248 -----PLL--PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF 286 (318)
T ss_dssp -----CCC--CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHH
T ss_pred -----CCC--CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHH
Confidence 000 011224566889999999999999999999998754
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=349.22 Aligned_cols=245 Identities=19% Similarity=0.116 Sum_probs=186.1
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEecC
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~~~ 153 (527)
.+.||+|+||+||.+... +|+.||||++.... .+.+.+|+.+|.++ +|||||++++++.+....+|||||+.
T Consensus 20 ~~~LG~G~~g~V~~~~~~----~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSF----QGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp EEEEEECSTTCEEEEEES----SSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred cCeEeeCCCeEEEEEEEE----CCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 356899999999875443 67899999986532 45788999999987 89999999999999999999999996
Q ss_pred CCCHhHHhhhcCCCC-----cCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC-------------CCceee
Q 009750 154 NDTLAKHLFHWENQT-----IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN-------------GDPRLS 215 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~-----l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~-------------~~~kl~ 215 (527)
|+|.+++....... .++..++.++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 59999997432111 133346789999999999999999 9999999999999754 489999
Q ss_pred cccCccccCCCC--------ccccCCccCCcccccC-------CcCCCCcccchhhHHHHHHHh-CCCCCCCCCcccccc
Q 009750 216 CFGLMKNSRDGK--------SYSTNLAYTPPEYLRN-------GRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNT 279 (527)
Q Consensus 216 DFG~a~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~ 279 (527)
|||+++...... ...||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--- 247 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--- 247 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH---
Confidence 999998765432 3468999999999976 568999999999999999999 888885432110
Q ss_pred ccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 280 VPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......... ........+...+..+.+||.+||+.||.+|||+.++++|-..
T Consensus 248 ---------~~i~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f 299 (434)
T 2rio_A 248 ---------SNIIRGIFS----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299 (434)
T ss_dssp ---------HHHHHTCCC----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred ---------HHHhcCCCC----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCcc
Confidence 000110000 0011112245677889999999999999999999999988654
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=346.97 Aligned_cols=244 Identities=18% Similarity=0.131 Sum_probs=185.4
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+...||+|+||+||..... +++.||||++.... ...+.+|+.+|+.+ +|||||++++++.+....+||||
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~----~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMF----DNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEES----SSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EecCCeeecCcCEEEEEEEEe----CCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 335667899999996643333 67889999997543 34578899999999 89999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-----CCCceeecccCccccCC
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-----NGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-----~~~~kl~DFG~a~~~~~ 225 (527)
|+. |+|.+++... ...+.+..++.++.||+.||.|||+.+ |+||||||+|||++. ...+||+|||+++....
T Consensus 99 ~~~-g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 99 LCA-ATLQEYVEQK-DFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CCS-EEHHHHHHSS-SCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CCC-CCHHHHHHhc-CCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 996 5999999753 334555567889999999999999999 999999999999953 33578999999986543
Q ss_pred C-------CccccCCccCCcccccC---CcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 226 G-------KSYSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 226 ~-------~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
. ....||+.|+|||++.+ ..++.++|||||||++|||+| |..||....... ......
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~------------~~~~~~ 243 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ------------ANILLG 243 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH------------HHHHTT
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH------------HHHHhc
Confidence 2 23568999999999974 567889999999999999999 888874321110 000000
Q ss_pred CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.... .........+..+.+||.+||+.||.+|||+.++++|-.
T Consensus 244 ~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~ 286 (432)
T 3p23_A 244 ACSL------DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286 (432)
T ss_dssp CCCC------TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTT
T ss_pred cCCc------cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCcc
Confidence 0000 001112345667889999999999999999999998754
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-42 Score=360.99 Aligned_cols=265 Identities=18% Similarity=0.182 Sum_probs=199.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEe------C
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD------G 142 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~ 142 (527)
..+.+++.||+|+||+||+|.+.. +++.||||+++..... ..+.+.+|+.++++++||||+++++++.. .
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~---tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQD---TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTT---TTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCeEEEEEEeeCCCeEEEEEEECC---CCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 456688899999999999999987 7889999998764321 24579999999999999999999999765 6
Q ss_pred CeeeEEEEecCCCCHhHHhhhcC-CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCC---ceeeccc
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGD---PRLSCFG 218 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~---~kl~DFG 218 (527)
+..++||||+++|+|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++. +||+|||
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccc
Confidence 67899999999999999997532 236899999999999999999999999 999999999999997765 8999999
Q ss_pred CccccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccc-cccccccchhhHHHHHhc
Q 009750 219 LMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVV-WNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 219 ~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 294 (527)
++...... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||....... |...... .........
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~--~~~~~~~~~ 247 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE--KSNEHIVVY 247 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC--------CCSC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhc--ccchhhhhh
Confidence 99875543 34578999999999999999999999999999999999999996542110 0000000 000000000
Q ss_pred Ccchhh--ccc--ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 009750 295 KNILHL--MDS--HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVS 340 (527)
Q Consensus 295 ~~~~~~--~~~--~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~ 340 (527)
...... +.. ..........+..+.+|+.+||..||++|||+.++++
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~ 297 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPN 297 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhc
Confidence 000000 000 1112244567888999999999999999999987543
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=324.35 Aligned_cols=231 Identities=16% Similarity=0.128 Sum_probs=184.9
Q ss_pred ccccc-ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHh-hcCCCCccceeEEEEEe----CCe
Q 009750 71 SDFIV-SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGV-GKLRHKRLANLIGYCCD----GDE 144 (527)
Q Consensus 71 ~~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~----~~~ 144 (527)
.+.++ +.||+|+||.||+|.+.. +++.||||++.. ...+.+|+.++ +.++||||+++++++.. ...
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNKR---TQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred chhhcCcccccCCCeEEEEEEEcC---CCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 34455 568999999999999987 789999999863 35788999998 55599999999999987 677
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC---CCCceeecccCcc
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMK 221 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG~a~ 221 (527)
.+|||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 899999999999999998655567999999999999999999999999 999999999999998 7899999999986
Q ss_pred ccCCCCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 222 NSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 222 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
... +..++.++|||||||++|||+||+.||...+..... ......+.
T Consensus 169 ~~~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~---------------~~~~~~~~ 215 (299)
T 3m2w_A 169 ETT------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---------------PGMKTRIR 215 (299)
T ss_dssp ECT------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------------CCSCCSSC
T ss_pred ccc------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh---------------HHHHHHHh
Confidence 533 345788999999999999999999999654321100 00000000
Q ss_pred ccccCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 302 DSHLEGNFS----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 302 ~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.. ...++ ...+..+.+|+.+||+.||.+|||+.++++|.+..
T Consensus 216 ~~--~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~ 261 (299)
T 3m2w_A 216 MG--QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 261 (299)
T ss_dssp TT--CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred hc--cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhc
Confidence 00 01122 22456789999999999999999999999986653
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=344.72 Aligned_cols=237 Identities=17% Similarity=0.138 Sum_probs=180.9
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC---ChHHHHHHHHHhhcCCC-Cccc---------e------
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP---DPKQFADEAWGVGKLRH-KRLA---------N------ 134 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~l~~l~H-~nIv---------~------ 134 (527)
+.+.||+|+||+||+|.+.. +|+.||||+++..... ..+.+.+|+.+++.++| +|+. .
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~---~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQE---TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEETTEEEEEEEETT---TCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred EecccccCCCEEEEEEEecC---CCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 44578999999999999987 7889999998844332 25789999999999987 2211 1
Q ss_pred ------eEEEEEe-----CCeeeEEEEecCCCCHhHHhh-----hcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccc
Q 009750 135 ------LIGYCCD-----GDERLLVAEYMPNDTLAKHLF-----HWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHD 198 (527)
Q Consensus 135 ------l~~~~~~-----~~~~~lv~E~~~~g~L~~~l~-----~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~D 198 (527)
++.++.. ...++++|+++ +++|.+++. ......+++..++.++.||+.||.|||+++ |||||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrD 236 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTY 236 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCC
Confidence 1111111 12457778876 579999984 223456889999999999999999999999 99999
Q ss_pred cCCCceEeCCCCCceeecccCccccCCC-CccccCCccCCcccc----------cCCcCCCCcccchhhHHHHHHHhCCC
Q 009750 199 LNAYRVLFDENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYL----------RNGRVTPESVIFSFGTVLLDLLSGKH 267 (527)
Q Consensus 199 lkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~DvwslGvvl~elltg~~ 267 (527)
|||+||||+.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||+||+.
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred cccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 9999999999999999999998865543 34466 999999999 55568889999999999999999999
Q ss_pred CCCCCCccccccccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 268 IPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 268 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
||...+... ....++... ..+ +..+.+||.+||+.||.+|||+.+++++
T Consensus 316 Pf~~~~~~~-------------------~~~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 316 PNTDDAALG-------------------GSEWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp CCCTTGGGS-------------------CSGGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCcchhh-------------------hHHHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 996542111 111111111 122 3568999999999999999998888765
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-41 Score=331.18 Aligned_cols=241 Identities=12% Similarity=0.060 Sum_probs=186.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--------CChHHHHHHHHHhhcCC---------CCccc
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--------PDPKQFADEAWGVGKLR---------HKRLA 133 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~l~~l~---------H~nIv 133 (527)
.+.+++.||+|+||+||+|++ +++.||||++..... ...+.+.+|+.+|+.++ |||||
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 21 KLQRCEKIGEGVFGEVFQTIA-----DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp HHHTCEEEEEETTEEEEEEEE-----TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cchheeeecccCceEEEEEEe-----CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 355788899999999999987 468899999986532 12367999999999886 77777
Q ss_pred eeEEEEE------------------------------eCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHH
Q 009750 134 NLIGYCC------------------------------DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAE 183 (527)
Q Consensus 134 ~l~~~~~------------------------------~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~ 183 (527)
++.+++. .....+|||||+++|+|.+.+. ...+++..++.|+.||+.
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTA 172 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHH
Confidence 7777653 2678999999999997777763 356899999999999999
Q ss_pred HHHHhh-hCCCccccccCCCceEeCCCC--------------------CceeecccCccccCCCCccccCCccCCccccc
Q 009750 184 ALDYCS-SEGRPLYHDLNAYRVLFDENG--------------------DPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLR 242 (527)
Q Consensus 184 aL~~lH-~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DFG~a~~~~~~~~~~~t~~y~aPE~~~ 242 (527)
||.||| +.+ |+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.
T Consensus 173 aL~~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 173 SLAVAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGC
T ss_pred HHHHHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhc
Confidence 999999 898 99999999999999887 8999999999876543 458999999999998
Q ss_pred CCcCCCCcccchhhHH-HHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh--cccccCCCCCHHHHHHHHH
Q 009750 243 NGRVTPESVIFSFGTV-LLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL--MDSHLEGNFSSEEATVVFD 319 (527)
Q Consensus 243 ~~~~~~~~DvwslGvv-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 319 (527)
+.. +.++||||||++ .+++++|..||... .+.......+... .........+...++.+.+
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d 314 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNV---------------LWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQE 314 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH---------------HHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHH
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcch---------------hhhhHHHHhhhhhhccCcccchhhhhhcCHHHHH
Confidence 766 889999998777 77889999887320 0000000000000 0001111123467889999
Q ss_pred HHHHhcccCCCCCCCHHHHH-HHh
Q 009750 320 LASRCLQYEPRERPNTKDLV-STL 342 (527)
Q Consensus 320 li~~cl~~dp~~Rpt~~~vl-~~L 342 (527)
||.+||+.| |+.+++ +|-
T Consensus 315 li~~~L~~d-----sa~e~l~~Hp 333 (336)
T 2vuw_A 315 FHRTMLNFS-----SATDLLCQHS 333 (336)
T ss_dssp HHHHGGGSS-----SHHHHHHHCG
T ss_pred HHHHHhccC-----CHHHHHhcCC
Confidence 999999977 999999 774
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-33 Score=296.32 Aligned_cols=182 Identities=13% Similarity=0.049 Sum_probs=131.6
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC----------hHHHHHHHHHhhcC-CCCccceeEEEEEeCCee
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD----------PKQFADEAWGVGKL-RHKRLANLIGYCCDGDER 145 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~----------~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 145 (527)
.++.|++|.+..++... .|+.||||++.+..... .++|.+|+++|+++ .|+||+++++++++++..
T Consensus 241 ~~~~~~~~~h~~~rr~~---fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~ 317 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYF---FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSG 317 (569)
T ss_dssp C-C--------CCEEEE---ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEE
T ss_pred ccccCCccccccccccc---ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEE
Confidence 45667777776665554 66779999997653221 24699999999999 799999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
||||||++|++|.++|. ..+.++.. .|+.||+.||.|||++| ||||||||+||||+.+|++||+|||+|+....
T Consensus 318 yLVMEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EEEEECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EEEEecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999999997 45667764 48899999999999999 99999999999999999999999999987654
Q ss_pred C----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCC
Q 009750 226 G----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHI 268 (527)
Q Consensus 226 ~----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p 268 (527)
. .+.+||+.|||||++.+ .+..++|+||+|+++++|+++..+
T Consensus 392 ~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 DCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 3 24578999999999975 466789999999999888766543
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-29 Score=263.32 Aligned_cols=176 Identities=16% Similarity=0.112 Sum_probs=144.8
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--------hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--------PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
+.||+|+||+||+|.. .++.+++|+........ .+++.+|+++|++++||||+++..++......+|
T Consensus 342 ~~LG~G~fg~Vy~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-----LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ------CCEEEEEEEC-----SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CEEeeCCCEEEEEEEE-----CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 4679999999999955 45679999875543222 2358999999999999999977777777888899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
||||++|++|.+++.. ++.|+.||++||.|||+++ |+||||||+|||++. ++||+|||+++.....
T Consensus 417 VmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 417 MMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999999963 5689999999999999999 999999999999998 9999999999987653
Q ss_pred ----------CccccCCccCCcccccC--CcCCCCcccchhhHHHHHHHhCCCCC
Q 009750 227 ----------KSYSTNLAYTPPEYLRN--GRVTPESVIFSFGTVLLDLLSGKHIP 269 (527)
Q Consensus 227 ----------~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGvvl~elltg~~p~ 269 (527)
....||+.|||||++.. ..|+..+|+||..+-..+.+.++.++
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 24578999999999987 55888899999999998888777654
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-26 Score=218.92 Aligned_cols=165 Identities=17% Similarity=0.041 Sum_probs=127.2
Q ss_pred HHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC------------------ChHHHHHHHHH
Q 009750 62 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------------------DPKQFADEAWG 123 (527)
Q Consensus 62 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~------------------~~~~~~~E~~~ 123 (527)
+....+.-..+.+.+.||+|+||.||+|.+ . +|+.||||+++..... ....+.+|+.+
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~---~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~ 157 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYS-E---KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRA 157 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEE-T---TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEe-C---CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHH
Confidence 334444444455668899999999999999 4 7899999999754221 13468999999
Q ss_pred hhcCCCCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCc
Q 009750 124 VGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203 (527)
Q Consensus 124 l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~N 203 (527)
|++++ | +++.+++.. +..++||||++||+|.+ +.. .....++.||+.||.|||+.+ |+||||||+|
T Consensus 158 l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~N 223 (282)
T 1zar_A 158 LQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYN 223 (282)
T ss_dssp HHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTS
T ss_pred HHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHH
Confidence 99999 4 666665543 56799999999999988 521 224569999999999999999 9999999999
Q ss_pred eEeCCCCCceeecccCccccCCCCccccCCccCCcccccC----------CcCCCCcccch
Q 009750 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRN----------GRVTPESVIFS 254 (527)
Q Consensus 204 Ill~~~~~~kl~DFG~a~~~~~~~~~~~t~~y~aPE~~~~----------~~~~~~~Dvws 254 (527)
||++ ++.+||+|||+++. +..|+|||++.. ..++..+|+|.
T Consensus 224 ILl~-~~~vkl~DFG~a~~---------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVE---------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp EEEE-TTEEEECCCTTCEE---------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EEEE-CCcEEEEECCCCeE---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 9999 99999999999864 345789998853 34556666664
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-21 Score=186.02 Aligned_cols=148 Identities=11% Similarity=0.034 Sum_probs=111.3
Q ss_pred HHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceE--EEEEEcCcCCCCC------------------------hH
Q 009750 62 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRW--IAVKKFTKHAWPD------------------------PK 115 (527)
Q Consensus 62 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~--vAiK~~~~~~~~~------------------------~~ 115 (527)
+....+.-..+.+.+.||+|+||.||+|.+.. +|+. ||||+++...... ..
T Consensus 39 l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~---~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 1zth_A 39 LYKLSAKGYITAMGGVISTGKEANVFYADGVF---DGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFI 115 (258)
T ss_dssp HHHHHHTTSEEEEEEEEEECSSEEEEEEEEEE---TTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHH
T ss_pred HHHHHhCCCchhhCCEEeecceEEEEEEEEcC---CCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHH
Confidence 33333333345577889999999999999854 7788 9999876432110 12
Q ss_pred HHHHHHHHhhcCCCCcc--ceeEEEEEeCCeeeEEEEecCC-C----CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHh
Q 009750 116 QFADEAWGVGKLRHKRL--ANLIGYCCDGDERLLVAEYMPN-D----TLAKHLFHWENQTIEWAMRLRVALYIAEALDYC 188 (527)
Q Consensus 116 ~~~~E~~~l~~l~H~nI--v~l~~~~~~~~~~~lv~E~~~~-g----~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~l 188 (527)
.+.+|+.+|.++.|++| ..++++ ...+|||||+.+ | +|.++... .++..+..++.||+.+|.||
T Consensus 116 ~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 116 WTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHH
Confidence 58899999999988764 444432 357899999942 4 67666531 23456788999999999999
Q ss_pred h-hCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 189 S-SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 189 H-~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
| +.+ ||||||||+|||++. .++|+|||++....
T Consensus 187 H~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 187 YQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HHTSC-EECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 9 888 999999999999998 99999999997643
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-20 Score=156.89 Aligned_cols=108 Identities=15% Similarity=0.269 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
+.++.++++|+.+++.|+|++|++.|++||+++|. ++.+|+++|.+|..+|++++|+.+|+++|+++|+++.+|+++|.
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 56889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|..+|++++|+..|+++++++|++..++
T Consensus 90 ~~~~~~~~~~A~~~~~~al~l~P~~~~a~ 118 (126)
T 4gco_A 90 CLVAMREWSKAQRAYEDALQVDPSNEEAR 118 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCcCCHHHH
Confidence 99999999999999999999999998765
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.80 E-value=7.3e-19 Score=150.12 Aligned_cols=113 Identities=17% Similarity=0.135 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC------C-----HHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 009750 413 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV------S-----PTVYARRSLCHLMCDQPDAALRDAMQAQC 481 (527)
Q Consensus 413 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~------~-----~~~~~~~~~~~~~~g~~~~A~~~~~~ai~ 481 (527)
.....+..++.+|+.+++.|+|++|+..|++||+++|.. + ..+|+|+|.++.++|+|++|+.+|++||+
T Consensus 6 ~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 6 KEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999882 2 33999999999999999999999999999
Q ss_pred h-------CCCcHHHH----HHHHHHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 482 V-------YPDWSTAF----YMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 482 ~-------~p~~~~~~----~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
+ +|+++++| |++|.+|..+|++++|+.+|++|++++|++....+
T Consensus 86 l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 86 YFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred hhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 9 99999999 99999999999999999999999999999876654
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3e-18 Score=147.86 Aligned_cols=106 Identities=8% Similarity=-0.080 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
.++++.++.+|..+++.|+|++|+..|+++++++|. ++.+|+++|.+|..+|+|++|+..|++|++++|+++.+|+++|
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg 111 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTG 111 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHH
Confidence 466889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHccccccc
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
.+|..+|++++|+..|++|++++|+..
T Consensus 112 ~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 112 QCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999864
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4e-19 Score=174.75 Aligned_cols=148 Identities=11% Similarity=0.020 Sum_probs=103.9
Q ss_pred HHHHhcCCCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--------------ChHH--------HHH
Q 009750 62 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--------------DPKQ--------FAD 119 (527)
Q Consensus 62 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--------------~~~~--------~~~ 119 (527)
+....+.=.-+.+.+.||.|+||.||+|.+. +|+.||||+++..... .... ..+
T Consensus 87 L~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~----~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~k 162 (397)
T 4gyi_A 87 LHTHAARKDVYSVGSRIGVGKESDIMIVADE----KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIK 162 (397)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEECT----TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEecCEeeeCCceEEEEEECC----CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 4444444445678889999999999999986 6788999987643110 0111 234
Q ss_pred HHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCcccccc
Q 009750 120 EAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199 (527)
Q Consensus 120 E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dl 199 (527)
|...|.++.+.++.-..-+.. ...+|||||++|++|..+.. . .....++.||+.+|.+||+.| ||||||
T Consensus 163 E~~nL~rL~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~g-IVHrDL 231 (397)
T 4gyi_A 163 EFAFMKALYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKHG-LIHGDF 231 (397)
T ss_dssp HHHHHHHHHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHTT-EECSCC
T ss_pred HHHHHHHHHhcCCCCCeeeec--cCceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHCC-CcCCCC
Confidence 666666664444322111111 12479999999988876542 1 134568899999999999999 999999
Q ss_pred CCCceEeCCCCC----------ceeecccCccccC
Q 009750 200 NAYRVLFDENGD----------PRLSCFGLMKNSR 224 (527)
Q Consensus 200 kp~NIll~~~~~----------~kl~DFG~a~~~~ 224 (527)
||.|||+++++. +.|+||+.+....
T Consensus 232 Kp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 232 NEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp STTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 999999988773 8899999876543
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-17 Score=138.91 Aligned_cols=104 Identities=15% Similarity=0.153 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc-------HH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW-------ST 488 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~-------~~ 488 (527)
+.+.+++++|+.+++.|+|++|+.+|++||+++|. ++.+|+++|.+|+.+|+|++|+++++++|+++|++ ..
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 55888999999999999999999999999999999 99999999999999999999999999999999876 46
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 489 AFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 489 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
+|+++|.++..+|++++|++.|+++|+++|+.
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 89999999999999999999999999988864
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.6e-17 Score=137.40 Aligned_cols=108 Identities=19% Similarity=0.227 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.+++.++.+|..++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+.+++++++++|+++.+|+++|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 35788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHccc------ccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLE------EKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~------p~~~~~~ 524 (527)
++..+|++++|+..|+++++++ |++...+
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~ 115 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREID 115 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHH
Confidence 9999999999999999999999 7765543
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-17 Score=144.54 Aligned_cols=107 Identities=19% Similarity=0.208 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc------------------CCCCCHHHHHHHHHHHHhcCChHHHHHH
Q 009750 414 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV------------------GTMVSPTVYARRSLCHLMCDQPDAALRD 475 (527)
Q Consensus 414 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------------------~~~~~~~~~~~~~~~~~~~g~~~~A~~~ 475 (527)
.++.+..++.+|..+++.|+|++|+..|++||++ +|. +..+|+++|.||+++|+|++|+.+
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHH
Confidence 4567899999999999999999999999999998 666 779999999999999999999999
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 476 AMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 476 ~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
++++|+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 86 ~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 86 SSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 9999999999999999999999999999999999999999999987
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.4e-17 Score=142.40 Aligned_cols=108 Identities=17% Similarity=0.130 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
+.+..++.+|..+++.|+|++|+++|+++|+++|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 107 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAE 107 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 55778899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHH-HHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADM-LKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~-~~~al~l~p~~~~~~ 524 (527)
+|..+|++++|+.. +++|++++|++..+|
T Consensus 108 ~~~~~~~~~~aa~~~~~~al~l~P~~~~~~ 137 (150)
T 4ga2_A 108 LLCKNDVTDGRAKYWVERAAKLFPGSPAVY 137 (150)
T ss_dssp HHHHHCSSSSHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHHhCcCCHHHH
Confidence 99999999988776 599999999998765
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.2e-17 Score=141.54 Aligned_cols=108 Identities=21% Similarity=0.291 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.++..++.+|..++..|+|++|+.+|+++++++|. +..+|+++|.+|+.+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|..+|++++|+.+|+++++++|++..+|
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 99999999999999999999999988754
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.1e-17 Score=138.42 Aligned_cols=108 Identities=10% Similarity=0.042 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
..++..++.+|..++..|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 456888999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
.+|..+|++++|+..|+++++++|++...
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCCCcc
Confidence 99999999999999999999999987654
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=135.77 Aligned_cols=108 Identities=9% Similarity=0.047 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.++..++.+|..++..|+|++|+..|++++..+|. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 94 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAE 94 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 56788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|..+|++++|+..|+++++++|++...+
T Consensus 95 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 123 (142)
T 2xcb_A 95 CHLQLGDLDGAESGFYSARALAAAQPAHE 123 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTCGGGH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCcchH
Confidence 99999999999999999999999876543
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.3e-16 Score=130.83 Aligned_cols=102 Identities=10% Similarity=0.037 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 009750 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 499 (527)
Q Consensus 420 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~ 499 (527)
.++.+|..+++.|++++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..|+++++++|+++.+++.+|.+|..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHcccccccc
Q 009750 500 LDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 500 ~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
+|++++|+..|+++++++|++..
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHC-------
T ss_pred cCCHHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999999998754
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-16 Score=158.17 Aligned_cols=106 Identities=7% Similarity=0.019 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHhhhh-HHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKE-FKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~-~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
...++.+|.++...|+ |++|+..|++||+++|. ++.+|+++|.++..+|++++|+..|++||+++|+++.+|+++|.+
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~ 209 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWV 209 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHH
Confidence 5666777777777775 77777777777777777 777777777777777777777777777777777777777777777
Q ss_pred HHHcCChHHHHHHHHHHHcccccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+..+|++++|+.+|+++|+++|++..+|
T Consensus 210 ~~~~g~~~eAl~~~~~al~l~P~~~~a~ 237 (382)
T 2h6f_A 210 IQEFKLWDNELQYVDQLLKEDVRNNSVW 237 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHHcCChHHHHHHHHHHHHhCCCCHHHH
Confidence 7777777777777777777777776665
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.3e-16 Score=140.51 Aligned_cols=107 Identities=17% Similarity=0.058 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHH----------------HHHHHHhcCChHHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYAR----------------RSLCHLMCDQPDAALRDAMQAQ 480 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~----------------~~~~~~~~g~~~~A~~~~~~ai 480 (527)
.++.++.+|..++..|+|++|+..|+++++++|. ++.+|+. +|.+|..+|++++|+..|++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4677889999999999999999999999999999 8999999 9999999999999999999999
Q ss_pred HhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 481 CVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 481 ~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+++|+++.+|+++|.+|..+|++++|+..|+++++++|++..+|
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~ 125 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAAN 125 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999999999999999999987765
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=3.4e-16 Score=133.27 Aligned_cols=96 Identities=13% Similarity=0.037 Sum_probs=90.0
Q ss_pred HhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCCh----------HHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 009750 429 FREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQP----------DAALRDAMQAQCVYPDWSTAFYMQAVALA 498 (527)
Q Consensus 429 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~----------~~A~~~~~~ai~~~p~~~~~~~~~g~~~~ 498 (527)
-+.+.|++|++.|++|++++|. ++.+|+++|.++..++++ ++|+..|++||+++|++.++||++|.+|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 3568899999999999999999 999999999999999876 59999999999999999999999999999
Q ss_pred HcC-----------ChHHHHHHHHHHHccccccccccC
Q 009750 499 KLD-----------MHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 499 ~~~-----------~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
.+| ++++|+++|++|++++|++..+|+
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~ 129 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 129 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHH
Confidence 885 899999999999999999987764
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.1e-15 Score=125.55 Aligned_cols=103 Identities=23% Similarity=0.391 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..++..|..++..|+|++|+..|+++++++|. +..+|+++|.++..+|++++|+..++++++++|+++.+|+++|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 4778999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHcccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
|..+|++++|+..|+++++++|++
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhHHHHHHHHHHHHHHChhH
Confidence 999999999999999999999984
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.1e-16 Score=134.64 Aligned_cols=100 Identities=7% Similarity=-0.069 Sum_probs=93.4
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCh
Q 009750 424 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMH 503 (527)
Q Consensus 424 ~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~ 503 (527)
+|..+..+|++++|++.|++++..+|. ++.+++++|.+|+++|+|++|++.|+++++++|+++.+|+++|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 688889999999999999999999888 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcccccccccc
Q 009750 504 KDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 504 ~~A~~~~~~al~l~p~~~~~~ 524 (527)
++|+..|+++++++|++..+|
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~ 102 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLV 102 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999988765
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=6.5e-15 Score=120.15 Aligned_cols=107 Identities=21% Similarity=0.353 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
.+..++..|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 5778999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHcccccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+..+|++++|+..|+++++++|++...|
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 109 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNPQLK 109 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999987665
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=6.4e-15 Score=133.31 Aligned_cols=113 Identities=17% Similarity=0.197 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCH----------------HHHHHHHHHHHhcCChHHHHH
Q 009750 411 WTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP----------------TVYARRSLCHLMCDQPDAALR 474 (527)
Q Consensus 411 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~----------------~~~~~~~~~~~~~g~~~~A~~ 474 (527)
.....+.+..++.+|..++..|+|++|+..|++++++.|. ++ .+|+++|.+|..+|++++|+.
T Consensus 31 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 109 (198)
T 2fbn_A 31 DEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAID 109 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3445677899999999999999999999999999999888 65 899999999999999999999
Q ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 475 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 475 ~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+++++++++|+++.+++++|.+|..+|++++|+..|+++++++|++..++
T Consensus 110 ~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 159 (198)
T 2fbn_A 110 HASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 159 (198)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHH
Confidence 99999999999999999999999999999999999999999999987654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.9e-15 Score=161.28 Aligned_cols=138 Identities=10% Similarity=0.046 Sum_probs=116.4
Q ss_pred HHHhhhhhhcccCCCccccchhhhHHHHH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHH
Q 009750 386 TAIHQILVMTHYKDDEGTNELSFQEWTQQ-MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHL 464 (527)
Q Consensus 386 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 464 (527)
..................+...++..++. .+.+..++.+|.++.+.|+|++|+++|++||+++|+ ++.+|+++|.+|.
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~ 88 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLK 88 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHH
Confidence 33444444444555555555556655543 345889999999999999999999999999999999 9999999999999
Q ss_pred hcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 465 MCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 465 ~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.+|++++|++.|++|++++|+++.+|+++|.+|..+|++++|++.|++||+++|++..+|
T Consensus 89 ~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~ 148 (723)
T 4gyw_A 89 EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAY 148 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999999999999999999999999999999999999999987765
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=7.8e-15 Score=122.69 Aligned_cols=107 Identities=19% Similarity=0.331 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
.+..++.+|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++++|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 93 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAA 93 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 4678899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHcccccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+..+|++++|+..|+++++++|++..+|
T Consensus 94 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 121 (133)
T 2lni_A 94 LEAMKDYTKAMDVYQKALDLDSSCKEAA 121 (133)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCGGGTHHH
T ss_pred HHHHhhHHHHHHHHHHHHHhCCCchHHH
Confidence 9999999999999999999999987655
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.60 E-value=8e-15 Score=144.42 Aligned_cols=111 Identities=15% Similarity=0.189 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC---------------HHHHHHHHHHHHhcCChHHHHHHHH
Q 009750 413 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---------------PTVYARRSLCHLMCDQPDAALRDAM 477 (527)
Q Consensus 413 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~g~~~~A~~~~~ 477 (527)
.....+..++.+|..++..|+|++|+.+|++|++++|. + ..+|+++|.||+++|++++|+.+|+
T Consensus 142 ~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 220 (336)
T 1p5q_A 142 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 220 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35567899999999999999999999999999999999 6 6999999999999999999999999
Q ss_pred HHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 478 QAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 478 ~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+|
T Consensus 221 ~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 221 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999999999999999999999999999999999999987665
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.2e-15 Score=160.99 Aligned_cols=108 Identities=11% Similarity=0.074 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
+++++|+.+|.++.+.|+|++|+++|++||+++|+ +..+|+++|.+|.++|++++|++.|++|++++|+++.+|+++|.
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~ 85 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 85 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45788888888888888888888888888888888 88888888888888888888888888888888888888888888
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|..+|++++|++.|++|++++|++..+|
T Consensus 86 ~l~~~g~~~~A~~~~~kAl~l~P~~~~a~ 114 (723)
T 4gyw_A 86 TLKEMQDVQGALQCYTRAIQINPAFADAH 114 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 88888888888888888888888877665
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-14 Score=129.47 Aligned_cols=107 Identities=19% Similarity=0.213 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..+...|..+...++++.|+..+.++++++|. +..++..+|.+|..+|++++|++.|+++++++|+++.+|+++|.+|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAY 151 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence 667788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHccccccccccC
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
..+|++++|+..|++||+++|++..++.
T Consensus 152 ~~~g~~~~A~~~~~~al~~~p~~a~~~l 179 (184)
T 3vtx_A 152 EGKGLRDEAVKYFKKALEKEEKKAKYEL 179 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHTTHHHHHHCS
T ss_pred HHCCCHHHHHHHHHHHHhCCccCHHHHH
Confidence 9999999999999999999999887654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1e-14 Score=149.87 Aligned_cols=111 Identities=13% Similarity=0.204 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC---------------HHHHHHHHHHHHhcCChHHHHHHHH
Q 009750 413 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---------------PTVYARRSLCHLMCDQPDAALRDAM 477 (527)
Q Consensus 413 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~g~~~~A~~~~~ 477 (527)
.....+..++.+|..+++.|+|++|+..|++|++++|. + ..+|+++|.||+++|+|++|+.+|+
T Consensus 263 ~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 341 (457)
T 1kt0_A 263 EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 341 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 35567899999999999999999999999999999998 6 7999999999999999999999999
Q ss_pred HHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 478 QAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 478 ~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+|
T Consensus 342 ~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~ 388 (457)
T 1kt0_A 342 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 388 (457)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHH
T ss_pred HHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999987765
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-14 Score=123.27 Aligned_cols=107 Identities=25% Similarity=0.299 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
+..++..|..++..|+|++|+..|+++++.+|. + ..+|+++|.+|..+|++++|+..++++++++|+++.+++++|
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 567889999999999999999999999999988 7 899999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
.+|..+|++++|+..|+++++++|++...|.
T Consensus 107 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 137 (148)
T 2dba_A 107 QALEKLGRLDQAVLDLQRCVSLEPKNKVFQE 137 (148)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCcHHHHH
Confidence 9999999999999999999999999877653
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.6e-15 Score=135.94 Aligned_cols=107 Identities=12% Similarity=0.154 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..++.+|..++..|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+..|+++++++|+++.+++++|.+
T Consensus 4 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 82 (217)
T 2pl2_A 4 AEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEA 82 (217)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4567899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHc-----------CChHHHHHHHHHHHcccccccccc
Q 009750 497 LAKL-----------DMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 497 ~~~~-----------~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+..+ |++++|+..|+++++++|++..+|
T Consensus 83 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 121 (217)
T 2pl2_A 83 YVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLH 121 (217)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHH
Confidence 9999 999999999999999999987765
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.7e-14 Score=124.43 Aligned_cols=110 Identities=20% Similarity=0.301 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHH
Q 009750 414 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 493 (527)
Q Consensus 414 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~ 493 (527)
..+.+..++.+|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 3466889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 494 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 494 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|.++..+|++++|+..|+++++++|++...|
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 118 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHDKDAK 118 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999887654
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-14 Score=145.01 Aligned_cols=113 Identities=15% Similarity=0.231 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhh----------------cCCCCCHHHHHHHHHHHHhcCChHHHHH
Q 009750 411 WTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFID----------------VGTMVSPTVYARRSLCHLMCDQPDAALR 474 (527)
Q Consensus 411 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----------------~~~~~~~~~~~~~~~~~~~~g~~~~A~~ 474 (527)
.....+.+..++.+|..+++.|+|++|+..|++|++ ++|. +..+|+++|.+|+++|+|++|++
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHH
Confidence 344556788999999999999999999999999998 7777 88999999999999999999999
Q ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 475 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 475 ~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
++++|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+|
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~ 344 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 344 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999999987654
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=4.7e-14 Score=117.18 Aligned_cols=109 Identities=20% Similarity=0.352 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
..++..++.+|..++..|+|++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 456889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.++..+|++++|+..|+++++++|++..+|
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 117 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDNETYK 117 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccchHHH
Confidence 999999999999999999999999887654
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.7e-14 Score=120.38 Aligned_cols=104 Identities=10% Similarity=0.046 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCH---HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc---HHHHHH
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP---TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW---STAFYM 492 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~---~~~~~~ 492 (527)
+.++.+|..++..|+|++|+..|+++++.+|. +. .+++++|.+++.+|++++|+..|+++++.+|++ +.+++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 45788999999999999999999999999998 66 799999999999999999999999999999999 999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 493 QAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 493 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
+|.+|..+|++++|+..|+++++..|++..+
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 112 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGSDAA 112 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCChHH
Confidence 9999999999999999999999999987654
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.7e-14 Score=129.48 Aligned_cols=116 Identities=9% Similarity=-0.049 Sum_probs=100.6
Q ss_pred cchhhhHHHH-HHHHHHHHHH----------------HHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhc
Q 009750 404 NELSFQEWTQ-QMRDMLEARK----------------RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC 466 (527)
Q Consensus 404 ~~~~~~~~~~-~~~~~~~~~~----------------~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 466 (527)
+-..++..+. ...++..++. +|.+++..|+|++|+..|+++++++|. +..+|+++|.+|..+
T Consensus 23 A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~ 101 (208)
T 3urz_A 23 AVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCR 101 (208)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHc
Confidence 3333443333 3355777777 999999999999999999999999999 999999999999999
Q ss_pred CChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-----------------------------------CChHHHHHHHH
Q 009750 467 DQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKL-----------------------------------DMHKDAADMLK 511 (527)
Q Consensus 467 g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~-----------------------------------~~~~~A~~~~~ 511 (527)
|++++|+..|+++++++|+++.+|+++|.+|+.+ |+|++|+.+|+
T Consensus 102 g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~ 181 (208)
T 3urz_A 102 GQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQ 181 (208)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHH
Confidence 9999999999999999999999999998877543 46889999999
Q ss_pred HHHcccccc
Q 009750 512 EAASLEEKR 520 (527)
Q Consensus 512 ~al~l~p~~ 520 (527)
+|++++|+.
T Consensus 182 ~al~l~P~~ 190 (208)
T 3urz_A 182 KVILRFPST 190 (208)
T ss_dssp HHTTTSCCH
T ss_pred HHHHhCCCH
Confidence 999999975
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=144.60 Aligned_cols=110 Identities=10% Similarity=-0.004 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHhCCCcHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ-PDAALRDAMQAQCVYPDWSTAFYMQ 493 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~-~~~A~~~~~~ai~~~p~~~~~~~~~ 493 (527)
...+..+..+|.++...|+|++|+..|++||+++|. +..+|+++|.++..+|+ +++|+..|++||+++|+++.+|+++
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~ 172 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHR 172 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 356888999999999999999999999999999999 99999999999999997 9999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 494 AVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 494 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
|.+|..+|++++|+..|++||+++|++..+|.
T Consensus 173 g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~ 204 (382)
T 2h6f_A 173 RVLVEWLRDPSQELEFIADILNQDAKNYHAWQ 204 (382)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCccCHHHHH
Confidence 99999999999999999999999999988773
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.8e-14 Score=136.79 Aligned_cols=104 Identities=23% Similarity=0.383 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..++.+|..++..|+|++|+..|++|++.+|. ++.+|+++|.+|..+|++++|+.+++++++++|+++.+++++|.+|
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 678899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHcccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
..+|++++|+..|+++++++|++..
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~~~ 107 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQRL 107 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHHHHHhCccchh
Confidence 9999999999999999999998753
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-14 Score=130.72 Aligned_cols=120 Identities=12% Similarity=-0.048 Sum_probs=106.8
Q ss_pred ccchhhhHHHH-HHHHHHHHHHHHHHHHhh-----------hhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChH
Q 009750 403 TNELSFQEWTQ-QMRDMLEARKRGDVAFRE-----------KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPD 470 (527)
Q Consensus 403 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~-----------~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~ 470 (527)
.+...++..+. ...++..++.+|..+... |++++|+..|+++++++|. +..+|+++|.+|..+|+++
T Consensus 57 ~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~ 135 (217)
T 2pl2_A 57 PALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERD 135 (217)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChH
Confidence 33333443333 234578899999999999 9999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 471 AALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 471 ~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|+..|+++++++ +++.+++++|.+|..+|++++|+..|+++++++|++..+|
T Consensus 136 ~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 188 (217)
T 2pl2_A 136 KAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLR 188 (217)
T ss_dssp HHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 9999999999999 9999999999999999999999999999999999987654
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-14 Score=142.94 Aligned_cols=113 Identities=15% Similarity=0.157 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCH-----------------HHHHHHHHHHHhcCChHHHHH
Q 009750 412 TQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP-----------------TVYARRSLCHLMCDQPDAALR 474 (527)
Q Consensus 412 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~~~~~~~~~~g~~~~A~~ 474 (527)
....+.+..++.+|..+++.|+|++|+..|++|+++.|. +. .+|+++|.||+++|+|++|+.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 445677899999999999999999999999999999888 65 389999999999999999999
Q ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 475 DAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 475 ~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
+|+++++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..+|.
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~ 302 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRR 302 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999887764
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.54 E-value=4e-14 Score=130.93 Aligned_cols=136 Identities=13% Similarity=0.087 Sum_probs=108.5
Q ss_pred HhhhhhhcccCCCccccchhhhHHHHHH--HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh
Q 009750 388 IHQILVMTHYKDDEGTNELSFQEWTQQM--RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM 465 (527)
Q Consensus 388 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 465 (527)
............+...+-..++..+... .+...++.+|..++..|+|++|+.+|+++++.+|. +..+|+++|.+|..
T Consensus 10 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~ 88 (228)
T 4i17_A 10 LKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRD 88 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHH
Confidence 3333333344444444444455444433 45677788999999999999999999999999998 89999999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCcH-------HHHHHHHHHHHHcCChHHHHHHHHHHHccccc--ccccc
Q 009750 466 CDQPDAALRDAMQAQCVYPDWS-------TAFYMQAVALAKLDMHKDAADMLKEAASLEEK--RQRSG 524 (527)
Q Consensus 466 ~g~~~~A~~~~~~ai~~~p~~~-------~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~--~~~~~ 524 (527)
+|++++|+..++++++++|+++ .+|+.+|.++..+|++++|+..|+++++++|+ +..+|
T Consensus 89 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 89 MKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 9999999999999999999988 67999999999999999999999999999998 65554
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.53 E-value=6e-14 Score=129.72 Aligned_cols=103 Identities=13% Similarity=0.132 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCC-CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGT-MVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
+..++.+|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+..|+++++++|+++.+|+.+|.+
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 85 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAA 85 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 57899999999999999999999999999998 6 889999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
|..+|++++|+..|+++++++|++.
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9999999999999999999999987
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.52 E-value=4.1e-14 Score=114.25 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCC--cHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD--WSTAFYMQAV 495 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~--~~~~~~~~g~ 495 (527)
+..++.+|..++..|+|++|+..|+++++++|. +..+++++|.++..+|++++|+..++++++++|+ ++.+++.+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 345677899999999999999999999999999 9999999999999999999999999999999999 9999999999
Q ss_pred HHHHc-CChHHHHHHHHHHHccccccc
Q 009750 496 ALAKL-DMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 496 ~~~~~-~~~~~A~~~~~~al~l~p~~~ 521 (527)
++..+ |++++|++.|+++++.+|.+.
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999 999999999999999999764
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.51 E-value=9.1e-15 Score=120.25 Aligned_cols=93 Identities=13% Similarity=0.045 Sum_probs=84.4
Q ss_pred hhhhHHHHHHHHHHhhhc---CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHH
Q 009750 430 REKEFKTAVDCYSQFIDV---GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDA 506 (527)
Q Consensus 430 ~~~~~~~A~~~~~~al~~---~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A 506 (527)
..|+|++|+..|++|+++ +|. +..+++++|.+|..+|++++|+..|+++++++|+++.+++++|.+|..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 587 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccccccccc
Q 009750 507 ADMLKEAASLEEKRQRS 523 (527)
Q Consensus 507 ~~~~~~al~l~p~~~~~ 523 (527)
+..|+++++++|++...
T Consensus 81 ~~~~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 81 VELLLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHhCCCcHHH
Confidence 99999999999987653
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=123.38 Aligned_cols=108 Identities=17% Similarity=0.222 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
+++..+..+|.+++..|++++|+..+.+++...|. +..++..+|.++...++++.|+..+.++++++|+++.+++.+|.
T Consensus 37 ~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~ 115 (184)
T 3vtx_A 37 NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGL 115 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 33566666666666666666666666666666666 66666666666666777777777777777788888888888888
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|..+|++++|++.|+++++++|++..+|
T Consensus 116 ~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 144 (184)
T 3vtx_A 116 VYDSMGEHDKAIEAYEKTISIKPGFIRAY 144 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhCCchhHHHHHHHHHHhcchhhhHH
Confidence 88888888888888888888888877655
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.7e-13 Score=113.92 Aligned_cols=103 Identities=16% Similarity=0.177 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc-------HH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW-------ST 488 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~-------~~ 488 (527)
+.+..++.+|..++..|+|++|+.+|+++++.+|. +..+++++|.++..+|++++|+..+++++++.|++ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 35778999999999999999999999999999999 99999999999999999999999999999999887 99
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 489 AFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 489 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
+++++|.+|..+|++++|+..|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999984
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.49 E-value=3.3e-13 Score=110.96 Aligned_cols=106 Identities=13% Similarity=0.184 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..++..|..++..|++++|+..|+++++..|. +..+++.+|.++...|++++|+..+++++++.|+++.+++.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 677889999999999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHcccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
..+|++++|+..|+++++++|++..++
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~ 114 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNNAEAK 114 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 999999999999999999999876654
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.49 E-value=2.4e-14 Score=123.27 Aligned_cols=95 Identities=7% Similarity=-0.200 Sum_probs=88.0
Q ss_pred HhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHH
Q 009750 429 FREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAAD 508 (527)
Q Consensus 429 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~ 508 (527)
...+++-.+-..|+++++++|. +..+++++|.+++.+|++++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.
T Consensus 13 ~~l~~~~~~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~ 91 (151)
T 3gyz_A 13 TAVIDAINSGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAAD 91 (151)
T ss_dssp HHHHHHHHTSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHCCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHH
Confidence 3445555566778999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcccccccccc
Q 009750 509 MLKEAASLEEKRQRSG 524 (527)
Q Consensus 509 ~~~~al~l~p~~~~~~ 524 (527)
.|++|++++|++..+|
T Consensus 92 ~~~~al~l~P~~~~~~ 107 (151)
T 3gyz_A 92 LYAVAFALGKNDYTPV 107 (151)
T ss_dssp HHHHHHHHSSSCCHHH
T ss_pred HHHHHHhhCCCCcHHH
Confidence 9999999999998776
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.6e-13 Score=119.16 Aligned_cols=106 Identities=12% Similarity=0.103 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHH-HHhcCCh--HHHHHHHHHHHHhCCCcHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLC-HLMCDQP--DAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~-~~~~g~~--~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
.++..++.+|..++..|+|++|+.+|+++++++|. +..+++++|.+ +...|++ ++|+..++++++++|+++.+++.
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 120 (177)
T 2e2e_A 42 QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALML 120 (177)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHH
Confidence 34788999999999999999999999999999999 99999999999 8899999 99999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHcccccccc
Q 009750 493 QAVALAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 493 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
+|.+|..+|++++|+..|+++++++|++..
T Consensus 121 la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 150 (177)
T 2e2e_A 121 LASDAFMQANYAQAIELWQKVMDLNSPRIN 150 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHcccHHHHHHHHHHHHhhCCCCcc
Confidence 999999999999999999999999998754
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.46 E-value=6.8e-13 Score=120.94 Aligned_cols=103 Identities=18% Similarity=0.162 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcH----------
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS---------- 487 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~---------- 487 (527)
+..++.+|..++..|+|++|+.+|+++++++|. +..+|+++|.+|..+|++++|++.|++++++.|++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 115 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 115 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccc
Confidence 568899999999999999999999999999999 999999999999999999999999999999888776
Q ss_pred ------HHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 488 ------TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 488 ------~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
.+++++|.+|..+|++++|+..|+++++++|++.
T Consensus 116 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 116 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999999999764
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.7e-13 Score=129.87 Aligned_cols=136 Identities=11% Similarity=-0.029 Sum_probs=107.7
Q ss_pred cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeeeEEEEe
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
.+...+|.|+++.||++.. .++.+++|+...........+.+|+.+++.+ .+.++.++++++...+..|+||||
T Consensus 17 ~~~~~~~g~s~~~v~~~~~-----~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~ 91 (263)
T 3tm0_A 17 RCVKDTEGMSPAKVYKLVG-----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE 91 (263)
T ss_dssp EEEECCSCCSSSEEEEEEC-----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred eeEeeccCCCCCeEEEEEC-----CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence 3555667888899999875 3466999998754323345799999999999 477888999999998999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-----------------------------------------
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS----------------------------------------- 190 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~----------------------------------------- 190 (527)
++|.+|.+.+. +......++.+++++|..||+
T Consensus 92 i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T 3tm0_A 92 ADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp CSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred cCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence 99999987642 112234678899999999998
Q ss_pred ------------------CCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 191 ------------------EGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 191 ------------------~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
.. ++|+|++|.|||++++..+.|+||+.+.
T Consensus 165 ~~~~~l~~~l~~~~~~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 165 KDPRELYDFLKTEKPEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSHHHHHHHHHHCCCCCCEE-EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCHHHHHHHHHhcCCCCCce-EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 23 7999999999999876666799998763
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.44 E-value=7.5e-14 Score=144.05 Aligned_cols=108 Identities=20% Similarity=0.298 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
+.+..++.+|..+++.|+|++|+++|++|++++|. +..+|+++|.+|.++|++++|++++++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45677888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|..+|++++|++.|++|++++|++..+|
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDKDAK 111 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCTTHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999987655
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.43 E-value=9.8e-14 Score=112.22 Aligned_cols=95 Identities=17% Similarity=0.277 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc------HHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW------STAF 490 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~------~~~~ 490 (527)
++..++.+|..++..|+|++|+..|++|++++|. ++.+|+++|.++..+|++++|++.++++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 4678999999999999999999999999999999 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHcCChHHHHHHHHH
Q 009750 491 YMQAVALAKLDMHKDAADMLKE 512 (527)
Q Consensus 491 ~~~g~~~~~~~~~~~A~~~~~~ 512 (527)
+++|.++..+|++++|+..|++
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHhHhhhHhHHHH
Confidence 9999999999999999877764
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.1e-12 Score=117.65 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.++..++.+|..++..|+|++|+..|++++ +. ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~---~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ---DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS---SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc---CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 456788999999999999999999999996 33 68899999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
+|..+|++++|+..|++++++.|++.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999999865
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-12 Score=121.75 Aligned_cols=105 Identities=17% Similarity=0.036 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..+..++.+|..++..|+|++|+..|+++++++|. +..+|.++|.+|..+|++++|+..|+++++++|+++.+++.+|.
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~ 119 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGI 119 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHH
Confidence 56888999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
+|..+|++++|+..|+++++++|++.
T Consensus 120 ~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 120 ALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999999875
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.1e-12 Score=120.81 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..+..+..+|..++..|+|++|+..|+++++.+|. +..+|+++|.++..+|++++|+..++++++++|+++.+|+.+|.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 215 (258)
T 3uq3_A 137 EKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 215 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHccc------ccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLE------EKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~------p~~~~~~ 524 (527)
+|..+|++++|+..|+++++++ |++...+
T Consensus 216 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~ 250 (258)
T 3uq3_A 216 AQIAVKEYASALETLDAARTKDAEVNNGSSAREID 250 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHH
Confidence 9999999999999999999999 7766544
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-12 Score=122.97 Aligned_cols=107 Identities=11% Similarity=0.049 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCC---cHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD---WSTAF 490 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~---~~~~~ 490 (527)
++..++.+|..++..|+|++|+..|+++++..|. + ..+++.+|.+|+.+|++++|+..|++++++.|+ .+.++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 92 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAE 92 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHH
Confidence 4778999999999999999999999999999998 7 899999999999999999999999999999885 47899
Q ss_pred HHHHHHHHH--------cCChHHHHHHHHHHHcccccccccc
Q 009750 491 YMQAVALAK--------LDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 491 ~~~g~~~~~--------~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+.+|.++.. +|++++|+..|+++++++|++..++
T Consensus 93 ~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 93 YERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 999999999 9999999999999999999976543
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.5e-13 Score=146.56 Aligned_cols=107 Identities=9% Similarity=-0.025 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.++..++.+|.+++..|+|++|++.|++|++++|. ++.+|+++|.+|.++|++++ ++.|++|++++|+++.+|+++|.
T Consensus 465 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~ 542 (681)
T 2pzi_A 465 WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLAR 542 (681)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHH
Confidence 34788999999999999999999999999999999 99999999999999999999 99999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|..+|++++|+++|++|++++|++..+|
T Consensus 543 ~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 571 (681)
T 2pzi_A 543 ARSAEGDRVGAVRTLDEVPPTSRHFTTAR 571 (681)
T ss_dssp HHHHTTCHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHcCCHHHHHHHHHhhcccCcccHHHH
Confidence 99999999999999999999999987765
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.38 E-value=7.9e-13 Score=108.03 Aligned_cols=86 Identities=16% Similarity=0.084 Sum_probs=82.6
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 009750 435 KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAA 514 (527)
Q Consensus 435 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 514 (527)
++|+..|+++++.+|. ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3688999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 009750 515 SLEEKRQ 521 (527)
Q Consensus 515 ~l~p~~~ 521 (527)
+++|++.
T Consensus 81 ~~~~~~~ 87 (115)
T 2kat_A 81 AAAQSRG 87 (115)
T ss_dssp HHHHHHT
T ss_pred Hhccccc
Confidence 9999754
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.1e-13 Score=137.94 Aligned_cols=126 Identities=13% Similarity=0.042 Sum_probs=108.9
Q ss_pred CCCccccchhhhHHHHHHHHHHHHHHHHHHHHhh---------hhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhc--
Q 009750 398 KDDEGTNELSFQEWTQQMRDMLEARKRGDVAFRE---------KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC-- 466 (527)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~-- 466 (527)
..+...+...++..+....+...+..+|.++... |+|++|+..|++|++++|. +..+|+++|.+|..+
T Consensus 150 ~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~ 228 (474)
T 4abn_A 150 KGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYF 228 (474)
T ss_dssp HTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHH
Confidence 3333334444444333223367888999999999 9999999999999999999 999999999999999
Q ss_pred ------CChHHHHHHHHHHHHhCC---CcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 467 ------DQPDAALRDAMQAQCVYP---DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 467 ------g~~~~A~~~~~~ai~~~p---~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|++++|+..|++|++++| +++.+|+++|.+|..+|++++|++.|++|++++|++..+|
T Consensus 229 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~ 295 (474)
T 4abn_A 229 NTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQ 295 (474)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999 9999999999999999999999999999999999987665
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.38 E-value=6.1e-13 Score=110.84 Aligned_cols=81 Identities=15% Similarity=0.048 Sum_probs=75.6
Q ss_pred HhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccc
Q 009750 443 QFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 443 ~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
++..++|. .+.++.++|.+|++.|+|++|++.|++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..
T Consensus 4 r~a~inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 4 RLAYINPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp ---CCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 45568898 89999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred cc
Q 009750 523 SG 524 (527)
Q Consensus 523 ~~ 524 (527)
+|
T Consensus 83 a~ 84 (126)
T 4gco_A 83 GY 84 (126)
T ss_dssp HH
T ss_pred HH
Confidence 76
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=2e-12 Score=119.99 Aligned_cols=104 Identities=18% Similarity=0.174 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..+..+|..++..|++++|+..|+++++.+|. +..++..+|.++..+|++++|++.+++++++.|+++.+++.+|.++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 135 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVL 135 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 455555566666666666666666666666555 5556666666666666666666666666666666666666666666
Q ss_pred HHcCChHHHHHHHHHHHcccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
..+|++++|+..|+++++++|++..
T Consensus 136 ~~~~~~~~A~~~~~~~~~~~~~~~~ 160 (243)
T 2q7f_A 136 VKLEQPKLALPYLQRAVELNENDTE 160 (243)
T ss_dssp HHTSCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHhccHHHHHHHHHHHHHhCCccHH
Confidence 6666666666666666665555433
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.37 E-value=4.6e-12 Score=105.37 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
+...+...|..++..|++++|+..|+++++..|. +..+++++|.++...|++++|+..++++++..|+++.+++.+|.+
T Consensus 34 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 112 (136)
T 2fo7_A 34 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 (136)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4677888999999999999999999999999888 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHcccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
+...|++++|+..|+++++++|++
T Consensus 113 ~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 113 YYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999863
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.36 E-value=2.5e-12 Score=118.77 Aligned_cols=107 Identities=8% Similarity=-0.006 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC--HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHH---HHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS--PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWST---AFYM 492 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~---~~~~ 492 (527)
++.++.+|..++..|+|++|+..|+++++..|... ..+++++|.+|+.+|++++|+..|+++++.+|+++. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 57889999999999999999999999999988722 478999999999999999999999999999999865 8999
Q ss_pred HHHHHHH------------------cCChHHHHHHHHHHHcccccccccc
Q 009750 493 QAVALAK------------------LDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 493 ~g~~~~~------------------~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|.++.. +|++++|+..|+++++.+|++..++
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 9999987 5799999999999999999987654
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-11 Score=103.02 Aligned_cols=105 Identities=14% Similarity=0.182 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 498 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~ 498 (527)
+.++..|..++..|++++|+..|+++++.+|. +..+++.+|.++...|++++|+..++++++..|+++.+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 46788999999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHcccccccccc
Q 009750 499 KLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 499 ~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
..|++++|+..|+++++++|++...|
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~~ 106 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEAW 106 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 99999999999999999999876543
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-12 Score=135.44 Aligned_cols=104 Identities=13% Similarity=0.011 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..++.+|..++..|+|++|++.|++|++++|. +..+|+++|.+|..+|++++|++.|+++++++|+++.+++++|.+|
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 101 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHAL 101 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 455666666666666666666666666666666 6666666666666666666666666666666666666666666666
Q ss_pred HHcCChHHHHHHHHHHHcccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
..+|++++|++.|+++++++|++..
T Consensus 102 ~~~g~~~~A~~~~~~al~~~p~~~~ 126 (568)
T 2vsy_A 102 EDAGQAEAAAAAYTRAHQLLPEEPY 126 (568)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 6666666666666666666665544
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.9e-12 Score=125.46 Aligned_cols=107 Identities=14% Similarity=0.090 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..++.+|..++..|+|++|+..|+++++.+|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+|+.+|.+|
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSY 143 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 345788899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHccccccccccC
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
..+|++++|+..|+++++++|++...|.
T Consensus 144 ~~~g~~~~A~~~~~~al~~~p~~~~~~~ 171 (365)
T 4eqf_A 144 TNTSHQQDACEALKNWIKQNPKYKYLVK 171 (365)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHHHCC--
T ss_pred HccccHHHHHHHHHHHHHhCccchHHHh
Confidence 9999999999999999999999877663
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.33 E-value=6.2e-12 Score=123.60 Aligned_cols=107 Identities=18% Similarity=0.200 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
+++.++.+|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHcccc---cccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEE---KRQRSG 524 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p---~~~~~~ 524 (527)
+..+|++++|+..|+++++++| ++...|
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 111 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNPSEQEEKEAE 111 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCcccChHHHH
Confidence 9999999999999999999999 766554
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=9.3e-13 Score=113.10 Aligned_cols=89 Identities=7% Similarity=-0.097 Sum_probs=82.7
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 009750 435 KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAA 514 (527)
Q Consensus 435 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 514 (527)
-.+...|+++++++|. +..+++++|.+++..|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|++++
T Consensus 4 ~~~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 82 (148)
T 2vgx_A 4 GSGGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGA 82 (148)
T ss_dssp --CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cchhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3445678999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccc
Q 009750 515 SLEEKRQRSG 524 (527)
Q Consensus 515 ~l~p~~~~~~ 524 (527)
+++|++..+|
T Consensus 83 ~l~p~~~~~~ 92 (148)
T 2vgx_A 83 VMDIXEPRFP 92 (148)
T ss_dssp HHSTTCTHHH
T ss_pred hcCCCCchHH
Confidence 9999987665
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.9e-12 Score=102.48 Aligned_cols=94 Identities=12% Similarity=0.077 Sum_probs=87.5
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHH-HHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 009750 421 ARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPT-VYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 499 (527)
Q Consensus 421 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~ 499 (527)
.+.+|..++..|+|++|+..|+++++.+|. +.. +|+++|.+|..+|++++|++.|+++++++|+++.++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 467899999999999999999999999999 899 99999999999999999999999999999999999865
Q ss_pred cCChHHHHHHHHHHHccccccccc
Q 009750 500 LDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 500 ~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
+.+.+|+..|++++.++|++...
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~~~ 97 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHHHH 97 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCSSC
T ss_pred -HHHHHHHHHHHHHhccCcccccC
Confidence 67899999999999999987643
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-11 Score=108.57 Aligned_cols=106 Identities=16% Similarity=0.128 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
+...+...|..++..|++++|+..|+++++..|. +..++..+|.++..+|++++|+..++++++..|+++.+++.+|.+
T Consensus 75 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 153 (186)
T 3as5_A 75 NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFS 153 (186)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 3677888999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHccccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
+..+|++++|+..|+++++++|++...
T Consensus 154 ~~~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 154 YEQMGRHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCchhh
Confidence 999999999999999999999987654
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-11 Score=115.98 Aligned_cols=106 Identities=14% Similarity=0.082 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhh--------------------------cCCCCCHHHHHHHHHHHHhcCChHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFID--------------------------VGTMVSPTVYARRSLCHLMCDQPDA 471 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~--------------------------~~~~~~~~~~~~~~~~~~~~g~~~~ 471 (527)
+..+..+|..+...|++++|+.+|+++++ .+|. +..++.++|.++...|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHH
Confidence 68889999999999999999999999999 6666 78899999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 472 ALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 472 A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..+|
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 210 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAY 210 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987665
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-11 Score=108.78 Aligned_cols=106 Identities=15% Similarity=0.068 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..++..|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|++.++++++..|+++.+++.+|.++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 120 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVAL 120 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHH
Confidence 567788999999999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHcccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
..+|++++|+..|+++++++|++...|
T Consensus 121 ~~~~~~~~A~~~~~~~~~~~~~~~~~~ 147 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALGLRPNEGKVH 147 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHcCcHHHHHHHHHHHHhcCccchHHH
Confidence 999999999999999999999876544
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.32 E-value=9.3e-12 Score=123.48 Aligned_cols=104 Identities=18% Similarity=0.213 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..+..+|..+...|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 4678889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
|..+|++++|+..|+++++++|+..
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~~ 315 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKSR 315 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC-
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccC
Confidence 9999999999999999999999843
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-11 Score=114.98 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
+...+...|..++..|++++|+..|+++++..|. +..++..+|.++...|++++|+..++++++.+|+++.+++.+|.+
T Consensus 124 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 202 (243)
T 2q7f_A 124 NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVT 202 (243)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 3667889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHcccccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|..+|++++|+..|+++++++|++..+|
T Consensus 203 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 203 YAYKENREKALEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHHTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHccCHHHHHHHHHHHHccCcchHHHH
Confidence 9999999999999999999999987765
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.5e-12 Score=132.77 Aligned_cols=106 Identities=11% Similarity=0.007 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHhhhhH-HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEF-KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
++..++.+|..++..|+| ++|+++|++|++++|. +..+|+++|.+|..+|++++|++.|+++++++|+ ..+++++|.
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~ 178 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSM 178 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHH
Confidence 377899999999999999 9999999999999999 9999999999999999999999999999999999 799999999
Q ss_pred HHHHc---------CChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKL---------DMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~---------~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|..+ |++++|+..|++|++++|++..+|
T Consensus 179 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 216 (474)
T 4abn_A 179 VLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSW 216 (474)
T ss_dssp HHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999 999999999999999999988776
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=9.9e-12 Score=119.34 Aligned_cols=102 Identities=8% Similarity=-0.068 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..++.+|.++...|++++|+..|++++..+|. ....+...+..+...++.++|+..++++++++|+++.+++++|.+|
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l 229 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD-TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQL 229 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS-HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc-hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 445555555555555555555555555555554 4444444444455555555566777788899999999999999999
Q ss_pred HHcCChHHHHHHHHHHHcccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
...|++++|+..|+++++++|++
T Consensus 230 ~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 230 HQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHcccHHHHHHHHHHHHhccccc
Confidence 99999999999999999999987
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5e-12 Score=100.51 Aligned_cols=76 Identities=18% Similarity=0.187 Sum_probs=67.9
Q ss_pred cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 447 VGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
.+|. ++.+|+++|.+|+.+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|+++++++|++...
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 3577 899999999999999999999999999999999999999999999999999999999999999998876543
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-11 Score=115.00 Aligned_cols=106 Identities=14% Similarity=0.118 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHH--hCCCcHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQC--VYPDWSTAFYMQA 494 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~--~~p~~~~~~~~~g 494 (527)
.+..+..+|..++..|++++|++.|+++++.+|. +..++.++|.+|..+|++++|++.++++++ ..|.++.+++.+|
T Consensus 70 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la 148 (252)
T 2ho1_A 70 SADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLG 148 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHH
Confidence 3666777777777777777777777777777777 777777777777777777777777777777 6777777777777
Q ss_pred HHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
.++..+|++++|+..|+++++++|++...
T Consensus 149 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 177 (252)
T 2ho1_A 149 LVSLQMKKPAQAKEYFEKSLRLNRNQPSV 177 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCcccHHH
Confidence 77777777777777777777777765443
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-11 Score=109.25 Aligned_cols=118 Identities=12% Similarity=0.003 Sum_probs=94.6
Q ss_pred cccchhhhHHHH-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHH-HHhcCChHHHHHHHHHH
Q 009750 402 GTNELSFQEWTQ-QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLC-HLMCDQPDAALRDAMQA 479 (527)
Q Consensus 402 ~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~-~~~~g~~~~A~~~~~~a 479 (527)
..+...++..+. ...++..++.+|..+...|++++|+..|+++++.+| ++..+..++.+ +...++..+|+..++++
T Consensus 23 ~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~a 100 (176)
T 2r5s_A 23 AQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQE 100 (176)
T ss_dssp HHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHH
Confidence 333344443333 445688899999999999999999999999999987 45666555644 33434556689999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 480 i~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
++++|+++.+++.+|.++..+|++++|+..|+++++++|+..
T Consensus 101 l~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 142 (176)
T 2r5s_A 101 LAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQ 142 (176)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT
T ss_pred HHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccC
Confidence 999999999999999999999999999999999999999753
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.5e-11 Score=120.15 Aligned_cols=106 Identities=13% Similarity=0.119 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 498 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~ 498 (527)
..++.+|..++..|+|++|+..|+++++.+|. +..+|+++|.++..+|++++|+..|+++++++|+++.+++.+|.+|.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 143 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFT 143 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 35677899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHccccccccccC
Q 009750 499 KLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 499 ~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
.+|++++|+..|+++++++|++...+.
T Consensus 144 ~~g~~~~A~~~~~~~~~~~~~~~~~~~ 170 (368)
T 1fch_A 144 NESLQRQACEILRDWLRYTPAYAHLVT 170 (368)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTTGGGCC
T ss_pred HcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 999999999999999999999887763
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.5e-11 Score=121.74 Aligned_cols=103 Identities=18% Similarity=0.242 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
.+..+..+|..++..|+|++|+..|+++++++|. +..+|+++|.++..+|++++|+..|+++++++|+++.+++.+|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3678889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHcccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
|..+|++++|+..|+++++++|++
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999987
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-11 Score=125.03 Aligned_cols=106 Identities=19% Similarity=0.196 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
..++..++.+|..++..|+|++|+..|+++++.+|. +..+|+.+|.+|..+|++++|+..|+++++++|+++.+++.+|
T Consensus 23 p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 101 (450)
T 2y4t_A 23 MADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRG 101 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 356889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHccccccc
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
.+|..+|++++|+..|+++++++|++.
T Consensus 102 ~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 102 HLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999999999876
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.28 E-value=3.4e-11 Score=93.19 Aligned_cols=85 Identities=12% Similarity=0.114 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..+..++.+|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++++|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34678899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHcC
Q 009750 496 ALAKLD 501 (527)
Q Consensus 496 ~~~~~~ 501 (527)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998765
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.28 E-value=6.3e-12 Score=118.95 Aligned_cols=108 Identities=6% Similarity=-0.061 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcC--CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVG--TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
++..++.+|..++..|+|++|+..|+++++.. +.....+|.++|.++..+|++++|++.++++++++|+++.+++.+|
T Consensus 36 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 115 (272)
T 3u4t_A 36 SPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIG 115 (272)
T ss_dssp CSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 46688899999999999999999999999942 2212556999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.+|..+|++++|+..|+++++++|++...|
T Consensus 116 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 145 (272)
T 3u4t_A 116 SYFYNKGNFPLAIQYMEKQIRPTTTDPKVF 145 (272)
T ss_dssp HHHHHTTCHHHHHHHHGGGCCSSCCCHHHH
T ss_pred HHHHHccCHHHHHHHHHHHhhcCCCcHHHH
Confidence 999999999999999999999999887665
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.6e-11 Score=109.80 Aligned_cols=107 Identities=15% Similarity=0.063 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhc-CChHHHHHHHHHHHH--hCCCcHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC-DQPDAALRDAMQAQC--VYPDWSTAFYMQ 493 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~-g~~~~A~~~~~~ai~--~~p~~~~~~~~~ 493 (527)
.+..+..+|..+...|++++|+..|+++++.+|. +..++.++|.++... |++++|+..++++++ ..|.+..+++.+
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l 119 (225)
T 2vq2_A 41 NELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNK 119 (225)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHH
Confidence 3778888999999999999999999999999888 889999999999999 999999999999998 677778999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 494 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 494 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|.++..+|++++|+..|+++++++|++...|
T Consensus 120 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 150 (225)
T 2vq2_A 120 GICSAKQGQFGLAEAYLKRSLAAQPQFPPAF 150 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCchHH
Confidence 9999999999999999999999998876544
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.4e-11 Score=120.59 Aligned_cols=146 Identities=12% Similarity=0.111 Sum_probs=108.9
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcC--cCCC-CChHHHHHHHHHhhcCC--CCccceeEEEEEeC-
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFT--KHAW-PDPKQFADEAWGVGKLR--HKRLANLIGYCCDG- 142 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~--~~~~-~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~- 142 (527)
+.....+..++.|.++.||+.... +..+++|+.. .... .....+.+|+.+++.|. +..+.+++.++.+.
T Consensus 37 ~~~~~~~~~l~~G~sn~~y~v~~~-----~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~ 111 (359)
T 3dxp_A 37 FAGPLSVEQFKGGQSNPTFKLVTP-----GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES 111 (359)
T ss_dssp CCCCCEEEECCC-CCSCEEEEECS-----SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT
T ss_pred CCCCceEEEcCCcccceEEEEEEC-----CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC
Confidence 334445677899999999998864 2458888876 3321 22457889999999996 45688999998776
Q ss_pred --CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC-----------------------------
Q 009750 143 --DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE----------------------------- 191 (527)
Q Consensus 143 --~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~----------------------------- 191 (527)
+..++||||++|.++.+.. ...++...+..++.++++.|..||+.
T Consensus 112 ~~g~~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (359)
T 3dxp_A 112 VIGRAFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYK 187 (359)
T ss_dssp TTSSCEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHH
Confidence 4589999999998775422 23477888899999999999999972
Q ss_pred ----------------------------CCccccccCCCceEeCCCCC--ceeecccCcccc
Q 009750 192 ----------------------------GRPLYHDLNAYRVLFDENGD--PRLSCFGLMKNS 223 (527)
Q Consensus 192 ----------------------------~~ivH~Dlkp~NIll~~~~~--~kl~DFG~a~~~ 223 (527)
..++|+|++|.|||++.++. +.|+||+.+...
T Consensus 188 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 188 LSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 12899999999999997753 689999987653
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.7e-11 Score=115.79 Aligned_cols=104 Identities=15% Similarity=0.152 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC--CHHHHHHHHHHHHh--------cCChHHHHHHHHHHHHhCCCcH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--SPTVYARRSLCHLM--------CDQPDAALRDAMQAQCVYPDWS 487 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~~~--------~g~~~~A~~~~~~ai~~~p~~~ 487 (527)
+..++.+|.+++..|+|++|+..|+++++..|.. ...+++++|.+++. +|++++|+..|+++++.+|+++
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 7789999999999999999999999999998752 46889999999999 9999999999999999999987
Q ss_pred HHH-----------------HHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 488 TAF-----------------YMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 488 ~~~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
.++ +.+|.+|..+|++++|+..|+++++..|++.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 766 8999999999999999999999999999854
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=2e-11 Score=122.26 Aligned_cols=106 Identities=15% Similarity=0.092 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..+..+|..+.+.|++++|+..|+++++++|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+|
T Consensus 271 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 349 (388)
T 1w3b_A 271 PDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVL 349 (388)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 567888899999999999999999999999888 8889999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHcccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
..+|++++|+..|+++++++|++..+|
T Consensus 350 ~~~g~~~~A~~~~~~a~~~~p~~~~a~ 376 (388)
T 1w3b_A 350 QQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHhhCCCCHHHH
Confidence 999999999999999999999877654
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.26 E-value=9.2e-12 Score=117.67 Aligned_cols=127 Identities=13% Similarity=0.068 Sum_probs=95.5
Q ss_pred CCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCc--cceeEEEEEeCCeeeEEEEecCCCC
Q 009750 79 GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR--LANLIGYCCDGDERLLVAEYMPNDT 156 (527)
Q Consensus 79 g~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~lv~E~~~~g~ 156 (527)
+.|..+.||++... +|+.++||+.... ....+.+|+.+++.+.+.+ +.+++++....+..++||||++|.+
T Consensus 29 ~gg~~~~v~~~~~~----~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~ 101 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQ----GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD 101 (264)
T ss_dssp CTTSSCEEEEEECT----TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred cCCCCceEEEEecC----CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcc
Confidence 35566899999764 4566999997654 2356889999999995444 5668998888788999999999988
Q ss_pred HhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC--------------------------------------------
Q 009750 157 LAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-------------------------------------------- 192 (527)
Q Consensus 157 L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~-------------------------------------------- 192 (527)
|. .. . .+ ...++.+++..|..||+..
T Consensus 102 l~--~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 102 LL--SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp TT--TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred cC--cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 84 21 1 11 1256677777888887642
Q ss_pred -------------CccccccCCCceEeCCCCCceeecccCccc
Q 009750 193 -------------RPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 193 -------------~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
.++|+|++|.|||+++++.+.|+||+.+..
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 189999999999998776677999998643
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.26 E-value=4e-11 Score=124.24 Aligned_cols=106 Identities=20% Similarity=0.281 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
.+.++.++.+|..+++.|+|++|+..|+++++.+| ++.+|+++|.++..+|++++|+..++++++++|+++.+|+.+|
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE--DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc--cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 45789999999999999999999999999999987 4899999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHcccccccc
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
.+|..+|++++|+..|+++++++|.+..
T Consensus 81 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 81 SANEGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCCCccc
Confidence 9999999999999999999999996543
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.9e-11 Score=122.34 Aligned_cols=106 Identities=10% Similarity=-0.004 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..+..+|..+...|++++|+..|+++++.+|. +..++.++|.++..+|++++|++.|+++++.+|+++.+|+.+|.++
T Consensus 101 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 179 (388)
T 1w3b_A 101 IDGYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVF 179 (388)
T ss_dssp HHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 566777888888888888888888888888887 7788888888888888888888888888888888888888888888
Q ss_pred HHcCChHHHHHHHHHHHcccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
...|++++|+..|+++++++|++..+|
T Consensus 180 ~~~g~~~~A~~~~~~al~~~p~~~~~~ 206 (388)
T 1w3b_A 180 NAQGEIWLAIHHFEKAVTLDPNFLDAY 206 (388)
T ss_dssp HTTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 888888888888888888888776554
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.4e-11 Score=116.84 Aligned_cols=108 Identities=17% Similarity=0.179 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP----TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 491 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~ 491 (527)
.........|..++..|++++|+..|+++++..|. +. .++..+|.++..+|++++|+..++++++++|+++.+++
T Consensus 232 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 310 (359)
T 3ieg_A 232 KKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALK 310 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34455667799999999999999999999999998 76 44778999999999999999999999999999999999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 492 MQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 492 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.+|.+|..+|++++|+..|+++++++|++..+|
T Consensus 311 ~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~ 343 (359)
T 3ieg_A 311 DRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIR 343 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHH
Confidence 999999999999999999999999999987765
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-11 Score=116.50 Aligned_cols=99 Identities=14% Similarity=0.084 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..+..+|..++..|+|++|+.+|+++++++|. +..+|+++|...+..+++++|++.++++++++|+++.+++.+|.++
T Consensus 108 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~ 186 (272)
T 3u4t_A 108 LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTT-DPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARAN 186 (272)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 445555555555555555555555555555555 5555555552222223555555555555555555555555555555
Q ss_pred HHcCC---hHHHHHHHHHHHccc
Q 009750 498 AKLDM---HKDAADMLKEAASLE 517 (527)
Q Consensus 498 ~~~~~---~~~A~~~~~~al~l~ 517 (527)
..+|+ +++|+..|++++++.
T Consensus 187 ~~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 187 AAQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHcCcchhhHHHHHHHHHHHHHH
Confidence 55555 555555555555554
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.25 E-value=2e-11 Score=127.45 Aligned_cols=109 Identities=23% Similarity=0.306 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHH
Q 009750 414 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 493 (527)
Q Consensus 414 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~ 493 (527)
....++.++.+|..++..|+|++|+..|+++++.+|. ++.+|+++|.+|..+|++++|++.|+++++++|+++.+++.+
T Consensus 21 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 99 (537)
T 3fp2_A 21 RQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRR 99 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 3456899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 494 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 494 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|.++..+|++++|+..|+ ++.++|+....+
T Consensus 100 a~~~~~~g~~~~A~~~~~-~~~~~~~~~~~~ 129 (537)
T 3fp2_A 100 ASANESLGNFTDAMFDLS-VLSLNGDFDGAS 129 (537)
T ss_dssp HHHHHHHTCHHHHHHHHH-HHC---------
T ss_pred HHHHHHcCCHHHHHHHHH-HHhcCCCCChHH
Confidence 999999999999999995 999999866544
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.25 E-value=8.4e-12 Score=106.14 Aligned_cols=86 Identities=8% Similarity=-0.071 Sum_probs=78.4
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccc
Q 009750 438 VDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517 (527)
Q Consensus 438 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 517 (527)
-..|+++++++|. +...++.+|.+++..|++++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|+++++++
T Consensus 4 ~~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 4 GGTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMD 82 (142)
T ss_dssp -----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred chhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 3578899999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 009750 518 EKRQRSG 524 (527)
Q Consensus 518 p~~~~~~ 524 (527)
|++...|
T Consensus 83 p~~~~~~ 89 (142)
T 2xcb_A 83 INEPRFP 89 (142)
T ss_dssp TTCTHHH
T ss_pred CCCcHHH
Confidence 9987664
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.7e-12 Score=112.58 Aligned_cols=99 Identities=11% Similarity=0.040 Sum_probs=88.4
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH-HHHcCCh
Q 009750 425 GDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA-LAKLDMH 503 (527)
Q Consensus 425 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~-~~~~~~~ 503 (527)
+..+...|+|++|+..|+++++.+|. +..+|+.+|.+|..+|++++|+..|+++++++|+++.+++.+|.+ +...|++
T Consensus 17 ~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~ 95 (177)
T 2e2e_A 17 LHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH 95 (177)
T ss_dssp TCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc
Confidence 34456789999999999999999999 999999999999999999999999999999999999999999999 8899999
Q ss_pred --HHHHHHHHHHHcccccccccc
Q 009750 504 --KDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 504 --~~A~~~~~~al~l~p~~~~~~ 524 (527)
++|+..|+++++++|++..+|
T Consensus 96 ~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 96 MTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHH
T ss_pred chHHHHHHHHHHHHhCCCcHHHH
Confidence 999999999999999987655
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3.4e-11 Score=112.53 Aligned_cols=106 Identities=14% Similarity=0.001 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
.+..++.+|..++..|+|++|+..|+++++.+|. +..+++.+|.+|...|++++|++.++++++++|+++.+++.+|.+
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 114 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPS-SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGF 114 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHH
Confidence 3788999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHc--cccccccc
Q 009750 497 LAKLDMHKDAADMLKEAAS--LEEKRQRS 523 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~--l~p~~~~~ 523 (527)
|..+|++++|+..|+++++ .+|.+...
T Consensus 115 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 143 (252)
T 2ho1_A 115 LYEQKRYEEAYQRLLEASQDTLYPERSRV 143 (252)
T ss_dssp HHHTTCHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred HHHHhHHHHHHHHHHHHHhCccCcccHHH
Confidence 9999999999999999999 77765544
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.7e-11 Score=128.08 Aligned_cols=108 Identities=12% Similarity=-0.006 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.++..++.+|..++..|+|++|+++|+++++++|. +..+++++|.+|..+|++++|++.|+++++++|+++.+++++|.
T Consensus 55 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 133 (568)
T 2vsy_A 55 GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLN 133 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHc---CChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKL---DMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~---~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
++..+ |++++|++.|+++++++|++...+
T Consensus 134 ~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 165 (568)
T 2vsy_A 134 WRRRLCDWRALDVLSAQVRAAVAQGVGAVEPF 165 (568)
T ss_dssp HHHHTTCCTTHHHHHHHHHHHHHHTCCCSCHH
T ss_pred HHHHhhccccHHHHHHHHHHHHhcCCcccChH
Confidence 99999 999999999999999999875543
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.24 E-value=2e-11 Score=101.71 Aligned_cols=72 Identities=8% Similarity=-0.013 Sum_probs=68.3
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 452 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
.+.++.++|.++++.|+|++|++.|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++...
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 467899999999999999999999999999999999999999999999999999999999999999987653
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.24 E-value=5.9e-11 Score=114.09 Aligned_cols=95 Identities=12% Similarity=0.067 Sum_probs=88.4
Q ss_pred HHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHH-H
Q 009750 428 AFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKD-A 506 (527)
Q Consensus 428 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~-A 506 (527)
+...|++++|+..|+++++..|. ++.+|+++|.++.++|++++|+..++++++++|+++++++++|.++..+|++.+ |
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 33559999999999999999999 999999999999999999999999999999999999999999999999999987 5
Q ss_pred HHHHHHHHccccccccc
Q 009750 507 ADMLKEAASLEEKRQRS 523 (527)
Q Consensus 507 ~~~~~~al~l~p~~~~~ 523 (527)
..+++++++++|++...
T Consensus 255 ~~~~~~~~~~~P~~~~~ 271 (291)
T 3mkr_A 255 NRYLSQLKDAHRSHPFI 271 (291)
T ss_dssp HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhCCCChHH
Confidence 68999999999998643
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.1e-11 Score=117.30 Aligned_cols=106 Identities=13% Similarity=0.017 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHhh-hhHHHHHHHHHHhhhcCCCCC-----HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHH---
Q 009750 418 MLEARKRGDVAFRE-KEFKTAVDCYSQFIDVGTMVS-----PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWST--- 488 (527)
Q Consensus 418 ~~~~~~~g~~~~~~-~~~~~A~~~~~~al~~~~~~~-----~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~--- 488 (527)
+..+...|.++... |+|++|+.+|++|+++.|... ..++.++|.+|..+|+|++|+..|++++++.|++..
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 196 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQW 196 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGG
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccH
Confidence 66788999999996 999999999999999876521 567999999999999999999999999999998754
Q ss_pred ----HHHHHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 489 ----AFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 489 ----~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
+|+++|.++..+|++++|+.+|+++++++|+...+
T Consensus 197 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 197 SLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 68999999999999999999999999999987654
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.23 E-value=6.3e-11 Score=108.17 Aligned_cols=108 Identities=12% Similarity=0.013 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHhh-hhHHHHHHHHHHhhh--cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHH
Q 009750 416 RDMLEARKRGDVAFRE-KEFKTAVDCYSQFID--VGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~-~~~~~A~~~~~~al~--~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
.+...+...|..++.. |++++|+..|+++++ ..|. +..+++++|.++..+|++++|+..++++++..|+++.+++.
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 152 (225)
T 2vq2_A 74 DSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKE 152 (225)
T ss_dssp TCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred CChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHH
Confidence 3477889999999999 999999999999999 5565 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHcccc-cccccc
Q 009750 493 QAVALAKLDMHKDAADMLKEAASLEE-KRQRSG 524 (527)
Q Consensus 493 ~g~~~~~~~~~~~A~~~~~~al~l~p-~~~~~~ 524 (527)
+|.++..+|++++|+..|+++++++| .+...|
T Consensus 153 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 185 (225)
T 2vq2_A 153 LARTKMLAGQLGDADYYFKKYQSRVEVLQADDL 185 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999 766543
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.2e-11 Score=118.27 Aligned_cols=107 Identities=18% Similarity=0.139 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcC---------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVG---------TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS 487 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~---------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~ 487 (527)
++..+...|..++..|+|++|+..|+++++.. |. ...++.++|.+|..+|++++|+..++++++++|+++
T Consensus 192 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 270 (330)
T 3hym_B 192 DPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNA 270 (330)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCS
T ss_pred ChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccch
Confidence 36788999999999999999999999999975 44 678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 488 TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 488 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.+++.+|.+|..+|++++|+..|+++++++|++..+|
T Consensus 271 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 307 (330)
T 3hym_B 271 STYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSV 307 (330)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHH
Confidence 9999999999999999999999999999999987665
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.22 E-value=6.2e-11 Score=114.95 Aligned_cols=102 Identities=15% Similarity=0.163 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..+..+|..++..|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 3678899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
|..+|++++|+..|+++++++|+
T Consensus 250 ~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 250 YSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHhccHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999998
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.22 E-value=9.1e-11 Score=113.76 Aligned_cols=106 Identities=10% Similarity=0.047 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..++.+|..++..|+|++|+..|+++++.+|. +..++..+|.++..+|++++|+..++++++++|+++.+++.+|.++
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 99 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSH 99 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHcccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
..+|++++|+..|+++++++|++...+
T Consensus 100 ~~~~~~~~A~~~~~~~~~~~~~~~~~~ 126 (327)
T 3cv0_A 100 TNEHNANAALASLRAWLLSQPQYEQLG 126 (327)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTTTC-
T ss_pred HHcCCHHHHHHHHHHHHHhCCccHHHH
Confidence 999999999999999999999987665
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.21 E-value=8.8e-11 Score=115.38 Aligned_cols=100 Identities=13% Similarity=0.160 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..+..+..+|.++++.|+|++|+.+|++|++++|. +..+|+++|.+|+.+|++++|+.+|++|++++|++..+++.+|.
T Consensus 194 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~ 272 (336)
T 1p5q_A 194 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAV 272 (336)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 34778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHH-HHHHHHHHcc
Q 009750 496 ALAKLDMHKDA-ADMLKEAASL 516 (527)
Q Consensus 496 ~~~~~~~~~~A-~~~~~~al~l 516 (527)
++..+|++++| ...|++.+..
T Consensus 273 ~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 273 CQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 5577777644
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=8.3e-11 Score=97.78 Aligned_cols=117 Identities=12% Similarity=-0.026 Sum_probs=94.6
Q ss_pred hHHHhhhhhhcccCCCccccchhhhHHHH-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHH
Q 009750 385 LTAIHQILVMTHYKDDEGTNELSFQEWTQ-QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCH 463 (527)
Q Consensus 385 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 463 (527)
...+...........+...+...++.... ...++..++.+|..++..|++++|+.+|+++++.+|. +..+++++|.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~ 94 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHH
Confidence 34444444444444444444444443333 2235788999999999999999999999999999999 999999999999
Q ss_pred HhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 009750 464 LMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDM 502 (527)
Q Consensus 464 ~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~ 502 (527)
..+|++++|++.++++++++|++..+++.+|.++..+|+
T Consensus 95 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999998774
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.5e-10 Score=118.08 Aligned_cols=107 Identities=17% Similarity=0.172 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP----TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
....+...|..++..|++++|+..|++++++.|. ++ .++.++|.++.++|++++|+..++++++++|+++.+|+.
T Consensus 256 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~ 334 (450)
T 2y4t_A 256 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKD 334 (450)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 3445566799999999999999999999999998 74 489999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 493 QAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 493 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|.++..+|++++|+..|+++++++|++..+|
T Consensus 335 l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 366 (450)
T 2y4t_A 335 RAEAYLIEEMYDEAIQDYETAQEHNENDQQIR 366 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCcchHHHH
Confidence 99999999999999999999999999987654
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.4e-10 Score=109.57 Aligned_cols=104 Identities=11% Similarity=0.028 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcH----------
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS---------- 487 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~---------- 487 (527)
+..+..+|..++..|+|++|+.+|+++++++|. +..+++++|.+|..+|++++|+..++++++++|+++
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 155 (275)
T 1xnf_A 77 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAE 155 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 556777778888888888888888888887777 777788888888888888888888888877777664
Q ss_pred ------------------------------------------------------------HHHHHHHHHHHHcCChHHHH
Q 009750 488 ------------------------------------------------------------TAFYMQAVALAKLDMHKDAA 507 (527)
Q Consensus 488 ------------------------------------------------------------~~~~~~g~~~~~~~~~~~A~ 507 (527)
.+|+.+|.+|..+|++++|+
T Consensus 156 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 235 (275)
T 1xnf_A 156 QKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSAT 235 (275)
T ss_dssp HHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHH
Confidence 67788888888888888888
Q ss_pred HHHHHHHcccccccc
Q 009750 508 DMLKEAASLEEKRQR 522 (527)
Q Consensus 508 ~~~~~al~l~p~~~~ 522 (527)
..|+++++++|++..
T Consensus 236 ~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 236 ALFKLAVANNVHNFV 250 (275)
T ss_dssp HHHHHHHTTCCTTCH
T ss_pred HHHHHHHhCCchhHH
Confidence 888888888887644
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=8.3e-11 Score=114.20 Aligned_cols=104 Identities=14% Similarity=-0.061 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
.+..+..+|..+...|++++|+..|+++++..|. +..+++.+|.+|..+|++++|++.++++++++|+++.+++.+|.+
T Consensus 124 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 202 (330)
T 3hym_B 124 YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVV 202 (330)
T ss_dssp CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3667888888888888888888888888888887 778888888888888888888888888888888888888888888
Q ss_pred HHHcCChHHHHHHHHHHHccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
+..+|++++|+..|++++++.|...
T Consensus 203 ~~~~~~~~~A~~~~~~a~~~~~~~~ 227 (330)
T 3hym_B 203 AFQNGEWKTAEKWFLDALEKIKAIG 227 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTTS
T ss_pred HHHcccHHHHHHHHHHHHHHhhhcc
Confidence 8888888888888888888776543
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-10 Score=100.83 Aligned_cols=101 Identities=18% Similarity=0.105 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..+...|..++..|+|++|+..|+++++++|. +..+|+++|.++..+|++++|+..++++++++|++..++..++.+
T Consensus 46 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 46 NAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4788999999999999999999999999999999 999999999999999999999999999999999999998555554
Q ss_pred --HHHcCChHHHHHHHHHHHcccc
Q 009750 497 --LAKLDMHKDAADMLKEAASLEE 518 (527)
Q Consensus 497 --~~~~~~~~~A~~~~~~al~l~p 518 (527)
+...|++++|+..++++..+-+
T Consensus 125 ~~~~~~~~~~~A~~~~~~~~~~~~ 148 (166)
T 1a17_A 125 NKIVKQKAFERAIAGDEHKRSVVD 148 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccchHHHhc
Confidence 8899999999999999876644
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=5.2e-11 Score=114.54 Aligned_cols=106 Identities=12% Similarity=-0.125 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-C----HHHHHHHHHHHHhc-CChHHHHHHHHHHHHhCCCc----
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-S----PTVYARRSLCHLMC-DQPDAALRDAMQAQCVYPDW---- 486 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~----~~~~~~~~~~~~~~-g~~~~A~~~~~~ai~~~p~~---- 486 (527)
.+..+...|.++...|+|++|+.+|++|+++.+.. + ..++.++|.+|... |++++|+..|++|+++.|..
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~ 155 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChH
Confidence 37789999999999999999999999999986541 1 56899999999996 99999999999999998865
Q ss_pred --HHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccc
Q 009750 487 --STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 487 --~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
..++.++|.+|..+|+|++|+..|+++++++|++..
T Consensus 156 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 578999999999999999999999999999998754
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-10 Score=112.21 Aligned_cols=108 Identities=8% Similarity=-0.072 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHH--HHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRS--LCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 493 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~--~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~ 493 (527)
.+.+.+..+|..+.+.|++++|++.|+++++.+|. +....+..+ ..+...|++++|+..|+++++.+|+++.+|+.+
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 34678889999999999999999999999999888 654433333 233345899999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 494 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 494 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|.++..+|++++|+..|+++++++|++..+|
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~~~l 237 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHPETL 237 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999988765
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-11 Score=124.79 Aligned_cols=108 Identities=18% Similarity=0.123 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.++..++.+|.++++.|+|++|+++|++|++++|. ++.+|+++|.+|..+|++++|++.|++|++++|+++.+++.+|.
T Consensus 38 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~ 116 (477)
T 1wao_1 38 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 116 (477)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred H--HHHcCChHHHHHHHH-----------HHHcccccccccc
Q 009750 496 A--LAKLDMHKDAADMLK-----------EAASLEEKRQRSG 524 (527)
Q Consensus 496 ~--~~~~~~~~~A~~~~~-----------~al~l~p~~~~~~ 524 (527)
+ +..+|++++|++.++ ++++++|+...++
T Consensus 117 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 158 (477)
T 1wao_1 117 CNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPK 158 (477)
T ss_dssp HHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCC
T ss_pred HHHHHHHHHHHHHhccccccchhHhhhhhhhccccccccccc
Confidence 9 899999999999999 9999999876554
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.2e-11 Score=117.78 Aligned_cols=104 Identities=14% Similarity=0.058 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH-H
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA-L 497 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~-~ 497 (527)
..++.+|.++++.|+|++|+.+|++||+++|. +..+|+++|.+|+.+|++++|+.+|+++++++|+++.++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 37889999999999999999999999999999 999999999999999999999999999999999999999999999 4
Q ss_pred HHcCChHHHHHHHHHHHccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
...+..++|...|++++.++|++...
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 55678899999999999999987654
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.14 E-value=3.8e-10 Score=103.97 Aligned_cols=99 Identities=13% Similarity=0.021 Sum_probs=86.7
Q ss_pred HHHHhhhhHHHHHHHHHHhhhcCCCCCHHHH-----------------HHHHHHHHhcCChHHHHHHHHHHHHhCCCcH-
Q 009750 426 DVAFREKEFKTAVDCYSQFIDVGTMVSPTVY-----------------ARRSLCHLMCDQPDAALRDAMQAQCVYPDWS- 487 (527)
Q Consensus 426 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~-----------------~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~- 487 (527)
..+...|++++|+..|+++++..|+ +..++ +.+|.+|++.|++++|+..|+++++..|+++
T Consensus 104 ~~~~~~~~~~~A~~~~~~~l~~~P~-~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 182 (225)
T 2yhc_A 104 RSDRDPQQARAAFSDFSKLVRGYPN-SQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQA 182 (225)
T ss_dssp ----CCHHHHHHHHHHHHHHTTCTT-CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHH
T ss_pred hhhcCcHHHHHHHHHHHHHHHHCcC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCc
Confidence 3334478999999999999999998 65443 6789999999999999999999999999986
Q ss_pred --HHHHHHHHHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 488 --TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 488 --~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
++++.+|.+|..+|++++|+..|++++...|++...++
T Consensus 183 ~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~~~~~ 222 (225)
T 2yhc_A 183 TRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTLEHHH 222 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCCCCTT
T ss_pred cHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCchhhcc
Confidence 78999999999999999999999999999999877654
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.6e-10 Score=118.68 Aligned_cols=100 Identities=18% Similarity=0.074 Sum_probs=44.8
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcC--------CCCCHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHhCCCcHHHH
Q 009750 421 ARKRGDVAFREKEFKTAVDCYSQFIDVG--------TMVSPTVYARRSLCHLMCD--QPDAALRDAMQAQCVYPDWSTAF 490 (527)
Q Consensus 421 ~~~~g~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~~~~~~~~~~g--~~~~A~~~~~~ai~~~p~~~~~~ 490 (527)
+..+|.+++..|+|++|+.+|++++++. +. .+.++.++|.++...| +|++|++.|++|++++|+++.++
T Consensus 97 ~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~ 175 (472)
T 4g1t_A 97 WGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE-SPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFT 175 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh-hHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHH
Confidence 3444444444444444444444444331 11 3344444444443322 34444444455544455544444
Q ss_pred HHHHHHHH---HcCChHHHHHHHHHHHccccccc
Q 009750 491 YMQAVALA---KLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 491 ~~~g~~~~---~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
+.+|.+++ ..+++++|++.|++|++++|++.
T Consensus 176 ~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~ 209 (472)
T 4g1t_A 176 SGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQ 209 (472)
T ss_dssp HHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCH
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcch
Confidence 44444432 22344444444555554444443
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.13 E-value=4.4e-10 Score=107.95 Aligned_cols=109 Identities=8% Similarity=0.020 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHhhh--hHHHHHHHHHHhhhcCCCCCHHHHHHHHHHH----Hhc---CChHHHHHHHHHHHHhCCCc
Q 009750 416 RDMLEARKRGDVAFREK--EFKTAVDCYSQFIDVGTMVSPTVYARRSLCH----LMC---DQPDAALRDAMQAQCVYPDW 486 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~----~~~---g~~~~A~~~~~~ai~~~p~~ 486 (527)
....+++.+|.++...+ ++++|++.++++|..+|. ++.+|+.++.++ ..+ ++++++++.++++++.+|.+
T Consensus 65 ~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkn 143 (306)
T 3dra_A 65 SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKN 143 (306)
T ss_dssp TCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCC
Confidence 45788899999999999 999999999999999999 999999999999 777 89999999999999999999
Q ss_pred HHHHHHHHHHHHHcCChH--HHHHHHHHHHccccccccccC
Q 009750 487 STAFYMQAVALAKLDMHK--DAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 487 ~~~~~~~g~~~~~~~~~~--~A~~~~~~al~l~p~~~~~~~ 525 (527)
..+|+.++.++..+|.++ ++++.+++++++||.|..+|.
T Consensus 144 y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 144 HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999 999999999999999999984
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.4e-10 Score=89.63 Aligned_cols=77 Identities=16% Similarity=0.091 Sum_probs=70.6
Q ss_pred CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 448 GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|..+..+++++|.++...|++++|+..++++++++|+++.+++++|.++..+|++++|+..|+++++++|++..+|
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 80 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK 80 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHH
Confidence 34436789999999999999999999999999999999999999999999999999999999999999999987654
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.12 E-value=3.6e-10 Score=117.87 Aligned_cols=109 Identities=13% Similarity=0.055 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..+..+...|..++..|+|++|+..|+++++.+|. +..+|.++|.++..+|++++|+..++++++++|+++.+++.+|.
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 386 (537)
T 3fp2_A 308 EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAE 386 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 34788999999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
++..+|++++|+..|+++++++|++...|.
T Consensus 387 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 416 (537)
T 3fp2_A 387 ILTDRGDFDTAIKQYDIAKRLEEVQEKIHV 416 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHCSSCSS
T ss_pred HHHHhCCHHHHHHHHHHHHHcCCcchhhHH
Confidence 999999999999999999999999877664
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.12 E-value=3e-10 Score=92.88 Aligned_cols=87 Identities=8% Similarity=-0.110 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
...+..++.+|.+++..|+|++|+.+|+++++++|. ++.+++++|.++..+|++++|+..++++++..|+++.......
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 466889999999999999999999999999999999 9999999999999999999999999999999999998765444
Q ss_pred HHHHHcCC
Q 009750 495 VALAKLDM 502 (527)
Q Consensus 495 ~~~~~~~~ 502 (527)
.+....+.
T Consensus 103 ai~~~~~~ 110 (117)
T 3k9i_A 103 AILFYADK 110 (117)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHH
Confidence 44444333
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.5e-10 Score=95.85 Aligned_cols=73 Identities=15% Similarity=0.005 Sum_probs=70.1
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 452 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.+..|.++|.+++..|+|++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|+++++++|++..+|
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 75 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAY 75 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 5678999999999999999999999999999999999999999999999999999999999999999987765
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.9e-10 Score=119.43 Aligned_cols=108 Identities=16% Similarity=0.120 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDV------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAF 490 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~ 490 (527)
++..+...|..+.+.|++++|++.|+++++. +|.....+|..+|.+|.+.|++++|++.++++++++|+++.+|
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 553 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVH 553 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 3677888999999999999999999999987 5552278999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 491 YMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 491 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+.+|.+|...|++++|++.|+++++++|++..+|
T Consensus 554 ~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 587 (597)
T 2xpi_A 554 TAIALVYLHKKIPGLAITHLHESLAISPNEIMAS 587 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHH
Confidence 9999999999999999999999999999987655
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.2e-11 Score=117.89 Aligned_cols=181 Identities=14% Similarity=0.090 Sum_probs=120.2
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCc--cceeEEEEEeCC---eeeEE
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKR--LANLIGYCCDGD---ERLLV 148 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~n--Iv~l~~~~~~~~---~~~lv 148 (527)
+..++.|....||+.. ..+++|+.... .....+.+|+.+|+.+ .+.. +.+++....... ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~--------~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN--------RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST--------TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC--------CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4457889999999863 12889986532 1245789999999888 4333 445555543333 35899
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC------------------------------------
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG------------------------------------ 192 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~------------------------------------ 192 (527)
||+++|.+|..... ..++..++..++.+++..|..||+..
T Consensus 95 m~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp EECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred EcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 99999988875432 24677777888888888888888510
Q ss_pred ---------------------CccccccCCCceEeCC--CCCceeecccCccccCCCCccccCCcc---CCcccccC---
Q 009750 193 ---------------------RPLYHDLNAYRVLFDE--NGDPRLSCFGLMKNSRDGKSYSTNLAY---TPPEYLRN--- 243 (527)
Q Consensus 193 ---------------------~ivH~Dlkp~NIll~~--~~~~kl~DFG~a~~~~~~~~~~~t~~y---~aPE~~~~--- 243 (527)
.++|+|++|.|||++. ...+.|+||+.+..............+ ..|+....
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 1699999999999998 456889999988764432111111111 22322110
Q ss_pred --C---------cCCCCcccchhhHHHHHHHhCCCCC
Q 009750 244 --G---------RVTPESVIFSFGTVLLDLLSGKHIP 269 (527)
Q Consensus 244 --~---------~~~~~~DvwslGvvl~elltg~~p~ 269 (527)
+ ......+.|++|.++|.+.+|..+|
T Consensus 251 ~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0 0111257899999999999998764
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.09 E-value=3.2e-10 Score=107.14 Aligned_cols=104 Identities=11% Similarity=-0.011 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHh----
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV--------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV---- 482 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~---- 482 (527)
...+..+..+|..++..|+|++|+.+|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 345778999999999999999999999999987 355 6889999999999999999999999999999
Q ss_pred ----CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 483 ----YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 483 ----~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
.|....+++.+|.+|..+|++++|+..|++++++.++
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999998665
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.7e-10 Score=91.56 Aligned_cols=69 Identities=14% Similarity=0.033 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 452 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
+..+|+++|.+++..|++++|++.|+++++++|+++.+|+++|.+|..+|++++|+..|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999999999999999999999999999999999999999999999999997
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.7e-10 Score=99.18 Aligned_cols=111 Identities=6% Similarity=-0.064 Sum_probs=90.1
Q ss_pred HhhhhhhcccCCCccccchhhhHHHHH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhc
Q 009750 388 IHQILVMTHYKDDEGTNELSFQEWTQQ-MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC 466 (527)
Q Consensus 388 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 466 (527)
+...........+...+...++..+.. ..++..++.+|.+++..|+|++|+.+|+++++++|. +..+|+++|.+|..+
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~ 92 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDM 92 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHc
Confidence 333333334444444444444444432 345889999999999999999999999999999999 999999999999999
Q ss_pred CChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 009750 467 DQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 499 (527)
Q Consensus 467 g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~ 499 (527)
|++++|+..|+++++++|+++.+|+++|.....
T Consensus 93 g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 93 ADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp TCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 999999999999999999999999998877654
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=6.9e-10 Score=91.52 Aligned_cols=87 Identities=17% Similarity=0.056 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..+...|..++..|++++|+.+|.++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 123 (131)
T 2vyi_A 45 NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIA 123 (131)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 4778899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHcCChH
Q 009750 497 LAKLDMHK 504 (527)
Q Consensus 497 ~~~~~~~~ 504 (527)
+..+|+++
T Consensus 124 ~~~~~~~~ 131 (131)
T 2vyi_A 124 ELKLREAP 131 (131)
T ss_dssp HHHHTTCC
T ss_pred HHHHhcCC
Confidence 99999863
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.07 E-value=2.4e-10 Score=97.45 Aligned_cols=72 Identities=15% Similarity=0.042 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCC-------cHH-----HHHHHHHHHHHcCChHHHHHHHHHHHcc----
Q 009750 453 PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD-------WST-----AFYMQAVALAKLDMHKDAADMLKEAASL---- 516 (527)
Q Consensus 453 ~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~-------~~~-----~~~~~g~~~~~~~~~~~A~~~~~~al~l---- 516 (527)
+..+.++|.+++++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 567899999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---cccccccc
Q 009750 517 ---EEKRQRSG 524 (527)
Q Consensus 517 ---~p~~~~~~ 524 (527)
+|++.++|
T Consensus 91 ~e~~pd~~~A~ 101 (159)
T 2hr2_A 91 GELNQDEGKLW 101 (159)
T ss_dssp CCTTSTHHHHH
T ss_pred ccCCCchHHHH
Confidence 99998888
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=4.1e-10 Score=118.23 Aligned_cols=110 Identities=8% Similarity=-0.096 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHhhhh----------HHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHh
Q 009750 415 MRDMLEARKRGDVAFREKE----------FKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD--QPDAALRDAMQAQCV 482 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g--~~~~A~~~~~~ai~~ 482 (527)
.+...+++.+|.++...|+ |++|++.++++++.+|. ++.+|+.++.++.+++ ++++|++.+++++++
T Consensus 60 P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~ 138 (567)
T 1dce_A 60 PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEA 138 (567)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh
Confidence 3557889999999999998 99999999999999999 9999999999999999 669999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcC-ChHHHHHHHHHHHccccccccccC
Q 009750 483 YPDWSTAFYMQAVALAKLD-MHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 483 ~p~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
+|.+..||+.+|.++..+| .+++|+++++++++++|.|..+|.
T Consensus 139 d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~ 182 (567)
T 1dce_A 139 DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (567)
T ss_dssp CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHH
Confidence 9999999999999999999 999999999999999999999985
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.06 E-value=5.2e-10 Score=108.37 Aligned_cols=108 Identities=8% Similarity=-0.070 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHh-------hhhH-------HHHHHHHHHhhh-cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFR-------EKEF-------KTAVDCYSQFID-VGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQ 480 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~-------~~~~-------~~A~~~~~~al~-~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai 480 (527)
.+++.++..|..+.. .|++ ++|+..|++|++ ++|. +..+|.++|.++...|++++|...|++++
T Consensus 48 ~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al 126 (308)
T 2ond_A 48 HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLL 126 (308)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 346666666666653 3554 788888888887 5777 77788888888888888888888888888
Q ss_pred HhCCCcHH-HHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 481 CVYPDWST-AFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 481 ~~~p~~~~-~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
++.|+++. +|+.+|.++..+|++++|+..|++|++++|.+...|
T Consensus 127 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 171 (308)
T 2ond_A 127 AIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVY 171 (308)
T ss_dssp TSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHH
T ss_pred hccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH
Confidence 88888776 788888888888888888888888888777654433
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.06 E-value=6.1e-10 Score=96.71 Aligned_cols=89 Identities=10% Similarity=0.029 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcH-HHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS-TAFYMQA 494 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~-~~~~~~g 494 (527)
..+..+..+|.+++..|+|++|+..|++||+++|. +..+|+++|.+|..+|++++|+.+|+++++++|+++ .+...++
T Consensus 61 ~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~ 139 (162)
T 3rkv_A 61 KNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMK 139 (162)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34678999999999999999999999999999999 999999999999999999999999999999999999 6677888
Q ss_pred HHHHHcCChHH
Q 009750 495 VALAKLDMHKD 505 (527)
Q Consensus 495 ~~~~~~~~~~~ 505 (527)
.+...++++++
T Consensus 140 ~~~~~~~~~~~ 150 (162)
T 3rkv_A 140 IVTERRAEKKA 150 (162)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
Confidence 88776655443
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.9e-10 Score=108.35 Aligned_cols=103 Identities=13% Similarity=0.162 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc----
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDV------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW---- 486 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~---- 486 (527)
.+..+...|.+++..|+|++|+.+|++|++. ++.....+++++|.+|.++|+|++|++++++|+++.+..
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~ 233 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHH
Confidence 3567899999999999999999999999952 122145689999999999999999999999999987544
Q ss_pred --HHHHHHHHHHHHHcCC-hHHHHHHHHHHHccccc
Q 009750 487 --STAFYMQAVALAKLDM-HKDAADMLKEAASLEEK 519 (527)
Q Consensus 487 --~~~~~~~g~~~~~~~~-~~~A~~~~~~al~l~p~ 519 (527)
+.+|+++|.+|..+|+ +++|+.+|++|+++...
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 8899999999999995 69999999999987653
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.05 E-value=5e-10 Score=100.84 Aligned_cols=98 Identities=9% Similarity=0.078 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
...+..+|.+++..|+|++|+.+|+++++++|. +..+++++|.+|..+|++++|+..|+++++++|+++.++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 578889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHH-HHHHHHHcc
Q 009750 498 AKLDMHKDAA-DMLKEAASL 516 (527)
Q Consensus 498 ~~~~~~~~A~-~~~~~al~l 516 (527)
..+++++++. ..|.+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~f~~ 186 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFDK 186 (198)
T ss_dssp HHHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 9999998888 555555443
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.6e-10 Score=106.79 Aligned_cols=100 Identities=9% Similarity=-0.015 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcC--------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHh-----
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVG--------TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV----- 482 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~----- 482 (527)
..+..+..+|..++..|+|++|+.+|++++++. |. ...++.++|.+|..+|++++|+..+++++++
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 119 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 119 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc
Confidence 457789999999999999999999999999873 44 6788999999999999999999999999998
Q ss_pred ---CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcc
Q 009750 483 ---YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 516 (527)
Q Consensus 483 ---~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 516 (527)
+|....+++++|.+|..+|++++|+..|++++++
T Consensus 120 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 120 GKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5888999999999999999999999999999998
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.05 E-value=8.6e-10 Score=97.27 Aligned_cols=83 Identities=8% Similarity=-0.096 Sum_probs=77.8
Q ss_pred hhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHcCChHHHHHH
Q 009750 432 KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW--STAFYMQAVALAKLDMHKDAADM 509 (527)
Q Consensus 432 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~--~~~~~~~g~~~~~~~~~~~A~~~ 509 (527)
++..+|+..|+++++.+|. +..+++++|.++..+|++++|+..|+++++++|++ +.+++++|.++..+|++++|+..
T Consensus 88 ~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~ 166 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK 166 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH
T ss_pred cccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH
Confidence 4455689999999999999 99999999999999999999999999999999986 66999999999999999999999
Q ss_pred HHHHHc
Q 009750 510 LKEAAS 515 (527)
Q Consensus 510 ~~~al~ 515 (527)
|+++|.
T Consensus 167 y~~al~ 172 (176)
T 2r5s_A 167 YRRQLY 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.04 E-value=4.6e-10 Score=92.46 Aligned_cols=71 Identities=15% Similarity=-0.010 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 454 TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
..++.+|.+++..|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|++|++++|++..+|
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 88 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 88 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 34789999999999999999999999999999999999999999999999999999999999999987765
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=2.5e-10 Score=119.78 Aligned_cols=108 Identities=9% Similarity=0.080 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHhhh--hHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHhCCCcHHHHHH
Q 009750 416 RDMLEARKRGDVAFREK--EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD-QPDAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g-~~~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
++..+++.++.+..+.+ +|++|++.++++++++|. +..+|.+++.++..+| .+++|+++++++|+.+|.+..||+.
T Consensus 105 K~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~ 183 (567)
T 1dce_A 105 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHY 183 (567)
T ss_dssp TCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHH
Confidence 55788999999999999 779999999999999999 9999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHc--------------CChHHHHHHHHHHHcccccccccc
Q 009750 493 QAVALAKL--------------DMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 493 ~g~~~~~~--------------~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+|.++..+ +.+++|++++++|++++|++..+|
T Consensus 184 r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW 229 (567)
T 1dce_A 184 RSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAW 229 (567)
T ss_dssp HHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHH
T ss_pred HHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHH
Confidence 99999986 568999999999999999999988
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=8.3e-10 Score=106.07 Aligned_cols=104 Identities=8% Similarity=0.015 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHh----
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV--------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV---- 482 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~---- 482 (527)
...+..+..+|..++..|++++|+.+|++++++ .|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 345778899999999999999999999999987 555 6788999999999999999999999999974
Q ss_pred ---------------------------------------------CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccc
Q 009750 483 ---------------------------------------------YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517 (527)
Q Consensus 483 ---------------------------------------------~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 517 (527)
.|..+.+++.+|.+|..+|++++|+..|++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57788999999999999999999999999999998
Q ss_pred cc
Q 009750 518 EK 519 (527)
Q Consensus 518 p~ 519 (527)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 86
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.04 E-value=3.8e-10 Score=116.89 Aligned_cols=106 Identities=12% Similarity=0.021 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHH------HHHHHHHHHHh---cCChHHHHHHHHHHHHhCCCcHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPT------VYARRSLCHLM---CDQPDAALRDAMQAQCVYPDWST 488 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~------~~~~~~~~~~~---~g~~~~A~~~~~~ai~~~p~~~~ 488 (527)
+..+...|..++..|++++|+..|+++++..|. +.. +++++|.++.. +|++++|+..++++++++|+++.
T Consensus 372 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 450 (514)
T 2gw1_A 372 PEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQ 450 (514)
T ss_dssp SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHH
Confidence 667888999999999999999999999998887 543 99999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 489 AFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 489 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+++.+|.+|..+|++++|+..|+++++++|++...|
T Consensus 451 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 486 (514)
T 2gw1_A 451 AKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKL 486 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHH
Confidence 999999999999999999999999999999987765
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6.7e-10 Score=113.90 Aligned_cols=91 Identities=15% Similarity=0.191 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..++.+|.++++.|+|++|+.+|++||+++|. +..+|+++|.+|+.+|++++|+.+|++|++++|++..+++.+|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 688999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHH
Q 009750 498 AKLDMHKDAADM 509 (527)
Q Consensus 498 ~~~~~~~~A~~~ 509 (527)
..++++++|...
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=106.04 Aligned_cols=105 Identities=13% Similarity=0.062 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc-----
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----- 486 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~----- 486 (527)
.+..+...|.++.. |+|++|+.+|++|+++.+.. ...++.++|.+|..+|+|++|+..|++++++.|++
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 193 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPT 193 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhH
Confidence 36788899999988 99999999999999886541 15789999999999999999999999999987654
Q ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 487 -STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 487 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
..+++.+|.++..+|++++|+..|++++ ++|....+
T Consensus 194 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~ 230 (307)
T 2ifu_A 194 CYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGS 230 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCC
Confidence 3588999999999999999999999999 99976543
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.02 E-value=1.8e-09 Score=107.33 Aligned_cols=93 Identities=17% Similarity=0.153 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..+..+..+|.++++.|+|++|+.+|++|++++|. ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.
T Consensus 271 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~ 349 (370)
T 1ihg_A 271 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLK 349 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHH
Q 009750 496 ALAKLDMHKDAADM 509 (527)
Q Consensus 496 ~~~~~~~~~~A~~~ 509 (527)
++..++++++|...
T Consensus 350 ~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 350 VKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888654
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.7e-09 Score=102.49 Aligned_cols=102 Identities=7% Similarity=-0.068 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHH---HhCCCcH--
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQ---CVYPDWS-- 487 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~~~g~~~~A~~~~~~ai---~~~p~~~-- 487 (527)
...++..|..+...|+|++|+.+|++|++..+.. ...+++++|.+|..+|++++|+..|++|+ +..|++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~ 194 (293)
T 2qfc_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc
Confidence 4556678999999999999999999999865441 15689999999999999999999999999 5566643
Q ss_pred --HHHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 488 --TAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 488 --~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
.+++++|.+|..+|+|++|+.+|++|+++.++
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999999999865
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.6e-10 Score=107.30 Aligned_cols=124 Identities=7% Similarity=-0.043 Sum_probs=102.2
Q ss_pred hhhcccCCCccccchhhhHHHH---------HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcC--------CCCCHH
Q 009750 392 LVMTHYKDDEGTNELSFQEWTQ---------QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVG--------TMVSPT 454 (527)
Q Consensus 392 l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~ 454 (527)
........+...+...++.... ....+..+..+|..++..|+|++|+.+|++++++. +. ...
T Consensus 34 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~ 112 (311)
T 3nf1_A 34 VIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAA 112 (311)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHH
Confidence 3333444444444444444443 23457889999999999999999999999999872 44 678
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcc
Q 009750 455 VYARRSLCHLMCDQPDAALRDAMQAQCVY--------PDWSTAFYMQAVALAKLDMHKDAADMLKEAASL 516 (527)
Q Consensus 455 ~~~~~~~~~~~~g~~~~A~~~~~~ai~~~--------p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 516 (527)
++.++|.+|..+|++++|+..+++++++. |....+++.+|.++..+|++++|+..|++++++
T Consensus 113 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 113 TLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 89999999999999999999999999884 777889999999999999999999999999998
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-09 Score=104.94 Aligned_cols=95 Identities=8% Similarity=-0.066 Sum_probs=89.0
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc--HHHHHHHHHHH
Q 009750 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW--STAFYMQAVAL 497 (527)
Q Consensus 420 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~--~~~~~~~g~~~ 497 (527)
.....+..+...+++++|+..|+++++.+|. +..+++++|.+|..+|++++|+..|.++++.+|++ ..++.++|.++
T Consensus 187 ~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~ 265 (287)
T 3qou_A 187 QGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEIL 265 (287)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHH
Confidence 3444566688899999999999999999999 99999999999999999999999999999999999 99999999999
Q ss_pred HHcCChHHHHHHHHHHHc
Q 009750 498 AKLDMHKDAADMLKEAAS 515 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~ 515 (527)
..+|+.++|+..|+++|.
T Consensus 266 ~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 266 AALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHCTTCHHHHHHHHHHH
T ss_pred HHcCCCCcHHHHHHHHHH
Confidence 999999999999999985
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.01 E-value=1.2e-09 Score=105.70 Aligned_cols=125 Identities=10% Similarity=-0.004 Sum_probs=100.5
Q ss_pred CCccccchhhhHHHHHH-HHHH-HHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh-cCChHHHHHH
Q 009750 399 DDEGTNELSFQEWTQQM-RDML-EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM-CDQPDAALRD 475 (527)
Q Consensus 399 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~g~~~~A~~~ 475 (527)
.+...+...++..+... .++. .+...|..+.+.|++++|+..|++|++.+|. ...+|...+...+. +|++++|++.
T Consensus 113 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~ 191 (308)
T 2ond_A 113 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKI 191 (308)
T ss_dssp TCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 33344444455444321 2244 7889999999999999999999999999888 78888877766443 7999999999
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcc---ccc-ccccc
Q 009750 476 AMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASL---EEK-RQRSG 524 (527)
Q Consensus 476 ~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l---~p~-~~~~~ 524 (527)
|+++++++|+++.+|..+|.++..+|++++|+..|++|++. +|+ +...|
T Consensus 192 ~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~ 244 (308)
T 2ond_A 192 FELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIW 244 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999995 664 44444
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-09 Score=104.56 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhh---hcCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCC----
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFI---DVGTMVSP----TVYARRSLCHLMCDQPDAALRDAMQAQCVYPD---- 485 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al---~~~~~~~~----~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~---- 485 (527)
.+..+...|..++..|+|++|+.+|++|+ +..+. +. .+++++|.+|..+|+|++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 36688999999999999999999999999 44444 32 68999999999999999999999999988643
Q ss_pred --cHHHHHHHHHHHHHcCChHHH-HHHHHHHHcccc
Q 009750 486 --WSTAFYMQAVALAKLDMHKDA-ADMLKEAASLEE 518 (527)
Q Consensus 486 --~~~~~~~~g~~~~~~~~~~~A-~~~~~~al~l~p 518 (527)
.+.+|+++|.+|..+|++++| ..+|++|+.+..
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 288999999999999999999 788999998754
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.00 E-value=6.6e-10 Score=89.04 Aligned_cols=76 Identities=16% Similarity=0.122 Sum_probs=71.8
Q ss_pred CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccc--ccccc
Q 009750 448 GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK--RQRSG 524 (527)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~--~~~~~ 524 (527)
+|. +..+++.+|.++...|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+ +..+|
T Consensus 2 ~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 2 VDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp CCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred CCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 566 78899999999999999999999999999999999999999999999999999999999999999999 76554
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-09 Score=115.24 Aligned_cols=102 Identities=12% Similarity=-0.060 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
+...+..+|..+.+.|++++|++.|+++++..|. +..+|..+|.+|.+.|++++|++.|++++++.|+++.+|+.+|.+
T Consensus 406 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 484 (597)
T 2xpi_A 406 FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVV 484 (597)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3667777888888888888888888888888777 777888888888888888888888888888888888888888888
Q ss_pred HHHcCChHHHHHHHHHHHccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
|...|++++|++.|++++++.|+
T Consensus 485 ~~~~g~~~~A~~~~~~~~~~~~~ 507 (597)
T 2xpi_A 485 AFNKSDMQTAINHFQNALLLVKK 507 (597)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhhhc
Confidence 88888888888888888877543
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.00 E-value=8.3e-10 Score=86.98 Aligned_cols=69 Identities=16% Similarity=0.079 Sum_probs=65.9
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 456 YARRSLCHLMCDQPDAALRDAMQAQCVYPDWST-AFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 456 ~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~-~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.+++|.+++..|++++|+..|+++++++|+++. +|+.+|.+|..+|++++|+..|+++++++|++..+|
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 467899999999999999999999999999999 999999999999999999999999999999988765
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.5e-09 Score=102.09 Aligned_cols=104 Identities=10% Similarity=-0.065 Sum_probs=92.1
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC-HHHHHHHHHHHHhcCChHHHHHHHHHHHHhC--CC-cHHHHHHHHH
Q 009750 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS-PTVYARRSLCHLMCDQPDAALRDAMQAQCVY--PD-WSTAFYMQAV 495 (527)
Q Consensus 420 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~--p~-~~~~~~~~g~ 495 (527)
..+.+|..+++.++|++|+.+|+.++...++.. ..+++++|.++..+|++++|+..|++++.-. |. .+++++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 789999999999999999999999988732201 4689999999999999999999999998654 66 7889999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
++..+|+.++|...|++++..+|+ ..++
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc-HHHH
Confidence 999999999999999999999998 5543
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-09 Score=91.18 Aligned_cols=77 Identities=12% Similarity=0.027 Sum_probs=71.9
Q ss_pred cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 447 VGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.++. ++..++.+|.+++..|++++|+..|.++++++|+++.+|+++|.++..+|++++|+..|+++++++|++..+|
T Consensus 4 ~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 4 MKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp --CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred Cccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHH
Confidence 4456 8999999999999999999999999999999999999999999999999999999999999999999987665
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=9.2e-10 Score=93.59 Aligned_cols=72 Identities=15% Similarity=0.045 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHhhhhH----------HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcC-----------ChHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEF----------KTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD-----------QPDAALR 474 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g-----------~~~~A~~ 474 (527)
++++.++..|.++.+.+++ ++|+..|++||+++|+ +..+|+++|.+|..+| ++++|++
T Consensus 34 ~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~ 112 (158)
T 1zu2_A 34 LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ 112 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH
Confidence 4588999999999998876 5999999999999999 9999999999999885 8999999
Q ss_pred HHHHHHHhCCCcHH
Q 009750 475 DAMQAQCVYPDWST 488 (527)
Q Consensus 475 ~~~~ai~~~p~~~~ 488 (527)
+|++|++++|++..
T Consensus 113 ~~~kAl~l~P~~~~ 126 (158)
T 1zu2_A 113 FFQQAVDEQPDNTH 126 (158)
T ss_dssp HHHHHHHHCTTCHH
T ss_pred HHHHHHHhCCCCHH
Confidence 99999999999853
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-09 Score=105.11 Aligned_cols=108 Identities=9% Similarity=0.076 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHhhh--hHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHhCCCcHHHHHH
Q 009750 416 RDMLEARKRGDVAFREK--EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ-PDAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~-~~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
++...+..++.+....+ .++++++++.++++.+|. |..+|.+++.++..+|. +++++++++++|+.+|.|..||+.
T Consensus 106 Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~ 184 (331)
T 3dss_A 106 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHY 184 (331)
T ss_dssp TCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHH
T ss_pred CCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 55778888899998888 499999999999999999 99999999999999999 599999999999999999999999
Q ss_pred HHHHHHHc--------------CChHHHHHHHHHHHcccccccccc
Q 009750 493 QAVALAKL--------------DMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 493 ~g~~~~~~--------------~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
++.++..+ +.++++++++++++.++|+|..+|
T Consensus 185 R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW 230 (331)
T 3dss_A 185 RSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAW 230 (331)
T ss_dssp HHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999988 568999999999999999999998
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.98 E-value=1e-09 Score=94.06 Aligned_cols=101 Identities=12% Similarity=0.146 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc------H
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW------S 487 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~------~ 487 (527)
..+...|..++..|+|++|+.+|++++++.+.. ...++.++|.++..+|++++|+..+++++++.+.. .
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 467778888888888888888888887764331 15567788888888888888888888887765433 4
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 488 TAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 488 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
.+++.+|.++..+|++++|+..|++++++..+
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 56778888888888888888888888877654
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=4.1e-09 Score=99.77 Aligned_cols=115 Identities=14% Similarity=0.126 Sum_probs=96.2
Q ss_pred CCccccchhhhHHHHHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh----cCChH
Q 009750 399 DDEGTNELSFQEWTQQMRDMLEARKRGDVAFR----EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPD 470 (527)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~g~~~ 470 (527)
.+...+...++.... ..++..++.+|..+.. .+++++|+.+|++|++.+ ++.+++++|.+|.. .++++
T Consensus 20 ~~~~~A~~~~~~a~~-~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~ 95 (273)
T 1ouv_A 20 KDFTQAKKYFEKACD-LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTN 95 (273)
T ss_dssp TCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHH
T ss_pred CCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHH
Confidence 333333444444443 3557889999999999 999999999999999983 67999999999999 99999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCChHHHHHHHHHHHccccc
Q 009750 471 AALRDAMQAQCVYPDWSTAFYMQAVALAK----LDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 471 ~A~~~~~~ai~~~p~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~l~p~ 519 (527)
+|+..|+++++. +++.+++++|.+|.. .+++++|+..|++|+++++.
T Consensus 96 ~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 146 (273)
T 1ouv_A 96 KALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDG 146 (273)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcH
Confidence 999999999987 489999999999999 99999999999999988743
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=5.5e-09 Score=88.36 Aligned_cols=81 Identities=15% Similarity=0.053 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
...++.+|..++..|+|++|+..|+++++++|. +..+++++|.++..+|++++|+..|+++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 788999999999999999999999999999999 8999999999999999999999999999999999999999888876
Q ss_pred HH
Q 009750 498 AK 499 (527)
Q Consensus 498 ~~ 499 (527)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 44
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.4e-09 Score=102.86 Aligned_cols=107 Identities=8% Similarity=-0.061 Sum_probs=97.0
Q ss_pred HHHHHHHHHHH----Hhh---hhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChH--HHHHHHHHHHHhCCCcHH
Q 009750 418 MLEARKRGDVA----FRE---KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPD--AALRDAMQAQCVYPDWST 488 (527)
Q Consensus 418 ~~~~~~~g~~~----~~~---~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~--~A~~~~~~ai~~~p~~~~ 488 (527)
...++.++.++ ... ++++++++.++++++.+|. +..+|+.++.++..+|.++ ++++.++++|+.+|.|..
T Consensus 103 y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~s 181 (306)
T 3dra_A 103 YQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNS 181 (306)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHH
Confidence 44555566666 444 7899999999999999999 9999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHcCC------hHHHHHHHHHHHccccccccccC
Q 009750 489 AFYMQAVALAKLDM------HKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 489 ~~~~~g~~~~~~~~------~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
||+.++.++..+++ +++++++++++|+++|+|..+|.
T Consensus 182 AW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~ 224 (306)
T 3dra_A 182 AWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWN 224 (306)
T ss_dssp HHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHH
Confidence 99999999999998 99999999999999999999983
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.7e-09 Score=103.61 Aligned_cols=110 Identities=9% Similarity=-0.008 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHhhh-hHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhc-C-ChHHHHHHHHHHHHhCCCcHHHHH
Q 009750 415 MRDMLEARKRGDVAFREK-EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC-D-QPDAALRDAMQAQCVYPDWSTAFY 491 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~-g-~~~~A~~~~~~ai~~~p~~~~~~~ 491 (527)
.+....++.++.++...| .++++++.++++|..+|. ++.+|+.++.++..+ + +++++++.++++++++|.+..+|+
T Consensus 85 P~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~ 163 (349)
T 3q7a_A 85 PAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWA 163 (349)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHH
T ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHH
Confidence 355778889999999999 599999999999999999 999999999999998 8 999999999999999999999999
Q ss_pred HHHHHHHHcCChH--------HHHHHHHHHHccccccccccC
Q 009750 492 MQAVALAKLDMHK--------DAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 492 ~~g~~~~~~~~~~--------~A~~~~~~al~l~p~~~~~~~ 525 (527)
.++.++..+|.++ +++++++++++++|.|..+|.
T Consensus 164 ~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~ 205 (349)
T 3q7a_A 164 YLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWG 205 (349)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999998 999999999999999999984
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.1e-09 Score=105.21 Aligned_cols=104 Identities=6% Similarity=-0.123 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-C----HHHHHHHHHHHHhcCChHHHHHHHHHHHHh-------CCC
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-S----PTVYARRSLCHLMCDQPDAALRDAMQAQCV-------YPD 485 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~----~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~-------~p~ 485 (527)
...++..|..++..++|++|+.+|++|+++.+.. + ..++.++|.+|..+|++++|+.+|++|++. .+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 3445568999999999999999999999864331 1 347999999999999999999999999952 234
Q ss_pred cHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 486 WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 486 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
...+++++|.+|..+|+|++|+.+|++|+++.++..
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 467999999999999999999999999999987754
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.7e-09 Score=108.03 Aligned_cols=104 Identities=13% Similarity=0.127 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHH-----hC-C
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQC-----VY-P 484 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~-----~~-p 484 (527)
..+..+...|..+...|+|++|+.+|++|+++.+.. ...++.++|.+|..+|++++|+..+++|++ .+ |
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~ 261 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILP 261 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccch
Confidence 447789999999999999999999999999874431 235899999999999999999999999999 56 8
Q ss_pred CcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 485 DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 485 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
..+.+++++|.+|..+|++++|+..|++|+++.++
T Consensus 262 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 262 SLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999998654
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.96 E-value=6.7e-10 Score=107.57 Aligned_cols=104 Identities=13% Similarity=0.014 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc-----
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----- 486 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~----- 486 (527)
.+..+...|..+...|+|++|+.+|++|+++.+.. ...++.++|.+|.. |++++|+..|++|+++.|..
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~ 153 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQ 153 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhH
Confidence 36788899999999999999999999999874321 25689999999999 99999999999999988754
Q ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 487 -STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 487 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
..+++++|.+|..+|+|++|+..|++++++.|++.
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999988754
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=98.96 E-value=2.4e-09 Score=84.79 Aligned_cols=85 Identities=12% Similarity=0.047 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc--HHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW--STAFYMQ 493 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~--~~~~~~~ 493 (527)
.++..++.+|..++..|+|++|+.+|+++++++|. +..+|+++|.+|..+|++++|++.|++++++.|.. ..+...+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l 83 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSEL 83 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHH
Confidence 34678999999999999999999999999999999 99999999999999999999999999999997754 3344444
Q ss_pred HHHHHHcC
Q 009750 494 AVALAKLD 501 (527)
Q Consensus 494 g~~~~~~~ 501 (527)
..++...+
T Consensus 84 ~~~l~~~~ 91 (100)
T 3ma5_A 84 QDAKLKAE 91 (100)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcc
Confidence 44444433
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=2.4e-09 Score=89.98 Aligned_cols=92 Identities=9% Similarity=0.044 Sum_probs=82.4
Q ss_pred hhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcC---ChHHHHHHHHHHHHhC-C-CcHHHHHHHHHHHHHcCChHHH
Q 009750 432 KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD---QPDAALRDAMQAQCVY-P-DWSTAFYMQAVALAKLDMHKDA 506 (527)
Q Consensus 432 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g---~~~~A~~~~~~ai~~~-p-~~~~~~~~~g~~~~~~~~~~~A 506 (527)
.....+.+.|.++++.++. +..+.+++|.|+.+.+ ++++|+..++.+++.+ | +..+++|++|.+|+++|+|++|
T Consensus 12 ~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 4456778888888888887 8999999999999988 6779999999999999 7 6799999999999999999999
Q ss_pred HHHHHHHHcccccccccc
Q 009750 507 ADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 507 ~~~~~~al~l~p~~~~~~ 524 (527)
+.+++++|+++|+|..+.
T Consensus 91 ~~y~~~lL~ieP~n~QA~ 108 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNNQAK 108 (152)
T ss_dssp HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhcCCCCHHHH
Confidence 999999999999987653
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.95 E-value=4.3e-09 Score=81.81 Aligned_cols=71 Identities=14% Similarity=-0.019 Sum_probs=67.3
Q ss_pred CCCCCHHHHHHHHHHHHhcCC---hHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 448 GTMVSPTVYARRSLCHLMCDQ---PDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~g~---~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
+|+ ++.++..+|.+++..++ .++|...+++|++++|+++.+++.+|..+++.|+|++|+..|+++++.+|.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 467 89999999999987666 799999999999999999999999999999999999999999999999998
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.6e-09 Score=97.30 Aligned_cols=106 Identities=9% Similarity=-0.014 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc---CCC---CCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCC--c-
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDV---GTM---VSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD--W- 486 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~~~---~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~--~- 486 (527)
..+..+..+|..+...|+|++|+.+|++++++ .++ ....++.++|.++..+|++++|+..+++++++.+. +
T Consensus 64 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 143 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQ 143 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccch
Confidence 44677888888888888888888888888876 231 13566888888888888888888888888865322 1
Q ss_pred ---HHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 487 ---STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 487 ---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
..++..+|.++..+|++++|+..|++++++-.+..
T Consensus 144 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 181 (203)
T 3gw4_A 144 VAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELE 181 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC
Confidence 33568888888888888888888888888765543
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=7.1e-09 Score=98.14 Aligned_cols=98 Identities=12% Similarity=-0.001 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHh----hhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCCCcH
Q 009750 416 RDMLEARKRGDVAFR----EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWS 487 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~ai~~~p~~~ 487 (527)
.++..++.+|..+.. .+++++|+.+|++|++. . ++.+++++|.+|.. .+++++|++.|+++++.. ++
T Consensus 72 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~-~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~ 146 (273)
T 1ouv_A 72 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--K-YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DG 146 (273)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CH
T ss_pred CCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--C-CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cH
Confidence 457888999999999 99999999999999988 3 67999999999999 999999999999999976 78
Q ss_pred HHHHHHHHHHHH----cCChHHHHHHHHHHHcccc
Q 009750 488 TAFYMQAVALAK----LDMHKDAADMLKEAASLEE 518 (527)
Q Consensus 488 ~~~~~~g~~~~~----~~~~~~A~~~~~~al~l~p 518 (527)
.+++++|.+|.. .+++++|+..|++++++++
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 181 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 181 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 899999999999 9999999999999998754
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.3e-09 Score=91.87 Aligned_cols=104 Identities=11% Similarity=0.064 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCC-----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc----
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTM-----VSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW---- 486 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~---- 486 (527)
..+..+..+|..++..|+|++|+.+|++++++.+. ....++.++|.++..+|++++|+..+++++++.+..
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 86 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 86 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcH
Confidence 45789999999999999999999999999976432 148899999999999999999999999999876553
Q ss_pred --HHHHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 487 --STAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 487 --~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
..+++++|.++..+|++++|+..|++++++.++
T Consensus 87 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 87 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999988654
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.94 E-value=6.2e-10 Score=106.35 Aligned_cols=103 Identities=9% Similarity=-0.004 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcH--------
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS-------- 487 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~-------- 487 (527)
.++..++.+|..++..|+|++|+..|++|++++|. +..+++++|.+|..+|++++|+..|+++++++|+++
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~ 114 (281)
T 2c2l_A 36 LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIP 114 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHH
Confidence 35888999999999999999999999999999999 999999999999999999999999999999998652
Q ss_pred -----------------------HHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 488 -----------------------TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 488 -----------------------~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
.....++.+ ..|++++|++.|++|++++|++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~~A~~~~~~al~~~p~~~ 169 (281)
T 2c2l_A 115 SALRIAKKKRWNSIEERRIHQESELHSYLTRL--IAAERERELEECQRNHEGHEDDG 169 (281)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--HHHHHHHHHTTTSGGGTTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHHhhhccccchh
Confidence 111122222 36899999999999999999764
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.1e-09 Score=108.02 Aligned_cols=102 Identities=13% Similarity=0.094 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHHh------CCC
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSP----TVYARRSLCHLMCDQPDAALRDAMQAQCV------YPD 485 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~~~~g~~~~A~~~~~~ai~~------~p~ 485 (527)
..+..++.+|..++..|+|++|+..|+++++++|. +. .+|+++|.+|..+|++++|+..+++++++ .|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 45778889999999999999999999999999888 65 58999999999999999999999999998 688
Q ss_pred cHHHHHHHHHHHHHcCChHHHHHHHHHHHcccc
Q 009750 486 WSTAFYMQAVALAKLDMHKDAADMLKEAASLEE 518 (527)
Q Consensus 486 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 518 (527)
...+++.+|.+|..+|++++|+..|++++++.+
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 157 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLAR 157 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999844
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.2e-09 Score=101.85 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC----HHHHHHHHHHHHhcCChHHHHHHHHHHHHh------CCCc
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS----PTVYARRSLCHLMCDQPDAALRDAMQAQCV------YPDW 486 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~----~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~------~p~~ 486 (527)
....++..|..++..|+|++|+..|+++++.+|. + ..++..+|.++...|++++|+..+++++++ .|..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 3567888999999999999999999999999888 6 478999999999999999999999999987 5667
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 487 STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 487 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
..+++.+|.+|..+|++++|+..|++++++.++..
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 117 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 117 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999999999999999999987643
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.9e-09 Score=106.24 Aligned_cols=104 Identities=10% Similarity=-0.012 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCC-----CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHH-----hCCC
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGT-----MVSPTVYARRSLCHLMCDQPDAALRDAMQAQC-----VYPD 485 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~-----~~p~ 485 (527)
..+..+...|..+...|+|++|+++|++|+++.+ .....++.++|.+|..+|++++|+..+++|++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 4577889999999999999999999999998632 11356899999999999999999999999999 8898
Q ss_pred cHHHHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 486 WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 486 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
.+.+++++|.+|..+|++++|+..|++|+++.++
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998665
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=9.8e-09 Score=99.20 Aligned_cols=107 Identities=8% Similarity=-0.066 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHhhhh----------HHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCC--hHHHHHHHHHHHHhCCC
Q 009750 418 MLEARKRGDVAFREKE----------FKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ--PDAALRDAMQAQCVYPD 485 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~--~~~A~~~~~~ai~~~p~ 485 (527)
...++.++.+....+. +++++..++.++..+|. ++.+|+.++.++..+++ +++++..++++++++|.
T Consensus 64 ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr 142 (331)
T 3dss_A 64 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADER 142 (331)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC
Confidence 4455555555555554 89999999999999999 99999999999999995 89999999999999999
Q ss_pred cHHHHHHHHHHHHHcCC-hHHHHHHHHHHHccccccccccC
Q 009750 486 WSTAFYMQAVALAKLDM-HKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 486 ~~~~~~~~g~~~~~~~~-~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
|..+|+.++.++..+|. +++++++++++++.+|.|..+|.
T Consensus 143 Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~ 183 (331)
T 3dss_A 143 NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 183 (331)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 99999999999999999 59999999999999999999984
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.91 E-value=1e-08 Score=83.53 Aligned_cols=84 Identities=12% Similarity=0.121 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
+...+...|..++..|++++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.++..+|.+
T Consensus 42 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 120 (125)
T 1na0_A 42 NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 120 (125)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3677889999999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HHHcC
Q 009750 497 LAKLD 501 (527)
Q Consensus 497 ~~~~~ 501 (527)
+..+|
T Consensus 121 ~~~~g 125 (125)
T 1na0_A 121 KQKQG 125 (125)
T ss_dssp HHHHC
T ss_pred HHhcc
Confidence 88765
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.5e-09 Score=106.82 Aligned_cols=103 Identities=13% Similarity=-0.008 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC------CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc--
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV------SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW-- 486 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~-- 486 (527)
...+..++.+|..++..|++++|+.+|++|+++.+.. ...++.++|.+|..+|++++|+..+++|+++.+..
T Consensus 140 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 219 (383)
T 3ulq_A 140 IEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ 219 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 3468899999999999999999999999999874331 35689999999999999999999999999886544
Q ss_pred ----HHHHHHHHHHHHHcCChHHHHHHHHHHHccc
Q 009750 487 ----STAFYMQAVALAKLDMHKDAADMLKEAASLE 517 (527)
Q Consensus 487 ----~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 517 (527)
..+++++|.+|..+|++++|+.+|++|+++.
T Consensus 220 ~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 254 (383)
T 3ulq_A 220 PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVF 254 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 3599999999999999999999999999953
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.4e-09 Score=105.11 Aligned_cols=103 Identities=14% Similarity=0.117 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC----HHHHHHHHHHHHhcCChHHHHHHHHHHHHh------CCCcH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS----PTVYARRSLCHLMCDQPDAALRDAMQAQCV------YPDWS 487 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~----~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~------~p~~~ 487 (527)
+..+..+|..++..|+|++|+.+|++++++.|. + ..++..+|.++...|++++|+..+++++++ .|..+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 557888999999999999999999999999888 6 468999999999999999999999999987 46678
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 488 TAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 488 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
.+++.+|.+|..+|++++|+..|++++++.|+..
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 121 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 121 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999988653
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=9.3e-09 Score=99.81 Aligned_cols=98 Identities=10% Similarity=0.047 Sum_probs=90.9
Q ss_pred HHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-C-Ch
Q 009750 427 VAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD-QPDAALRDAMQAQCVYPDWSTAFYMQAVALAKL-D-MH 503 (527)
Q Consensus 427 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g-~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~-~-~~ 503 (527)
...+.+..++|++.++++|.++|. +..+|+.++.++..+| .++++++.++++|+.+|++..+|+.++.++..+ + ++
T Consensus 63 ~~~~~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~ 141 (349)
T 3q7a_A 63 IAAKEEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDP 141 (349)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCC
T ss_pred HHHhCCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCCh
Confidence 334455567999999999999999 9999999999999999 599999999999999999999999999999998 8 99
Q ss_pred HHHHHHHHHHHccccccccccC
Q 009750 504 KDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 504 ~~A~~~~~~al~l~p~~~~~~~ 525 (527)
+++++.++++|+++|+|..+|.
T Consensus 142 ~~EL~~~~k~L~~dpkNy~AW~ 163 (349)
T 3q7a_A 142 VSEIEYIHGSLLPDPKNYHTWA 163 (349)
T ss_dssp HHHHHHHHHHTSSCTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999998883
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.87 E-value=7.2e-09 Score=94.42 Aligned_cols=96 Identities=13% Similarity=0.016 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHhhh----hHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCC--Cc
Q 009750 417 DMLEARKRGDVAFREK----EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYP--DW 486 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~ai~~~p--~~ 486 (527)
++..++.+|..+.. + ++++|+.+|++|++. . ++.+++++|.+|.. .+++++|+++|++|++..| ++
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~ 124 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--G-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAA 124 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHH
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcch
Confidence 45666666666666 5 677777777777554 3 56667777777766 6677777777777777666 35
Q ss_pred HHHHHHHHHHHHH----cCChHHHHHHHHHHHcc
Q 009750 487 STAFYMQAVALAK----LDMHKDAADMLKEAASL 516 (527)
Q Consensus 487 ~~~~~~~g~~~~~----~~~~~~A~~~~~~al~l 516 (527)
+.+++++|.+|.. .+++++|+.+|++|+++
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 7777777777777 66777777777777766
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.87 E-value=5e-09 Score=107.43 Aligned_cols=104 Identities=13% Similarity=0.002 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhc-------------------CChHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC-------------------DQPDAALRDAM 477 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~-------------------g~~~~A~~~~~ 477 (527)
.+..+..+|..+...|++++|+..|++|++.+|. +..++.++|.+|... +.+++|+..++
T Consensus 246 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 324 (472)
T 4g1t_A 246 VTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLK 324 (472)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3667788888888899999999999998888888 888888888877543 33567778888
Q ss_pred HHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 478 QAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 478 ~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
++++++|.++.+++.+|.+|..+|++++|+..|+++|+++|++.
T Consensus 325 ~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 325 KADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred HHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 88888888888888888888888888888888888887776543
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.86 E-value=1.7e-08 Score=81.31 Aligned_cols=80 Identities=9% Similarity=-0.021 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..+..+|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.++..++.+
T Consensus 37 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 37 NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNM 115 (118)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 4778899999999999999999999999999999 999999999999999999999999999999999999999999887
Q ss_pred H
Q 009750 497 L 497 (527)
Q Consensus 497 ~ 497 (527)
.
T Consensus 116 ~ 116 (118)
T 1elw_A 116 E 116 (118)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.86 E-value=5.8e-09 Score=95.03 Aligned_cols=104 Identities=8% Similarity=-0.084 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHh----hhhHHHHHHHHHHhhhcCCC-CCHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCCCc
Q 009750 416 RDMLEARKRGDVAFR----EKEFKTAVDCYSQFIDVGTM-VSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDW 486 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~----~g~~~~A~~~~~~ai~~~p~~ 486 (527)
..+..++.+|..++. .+++++|+.+|++|++..+. .++.+++++|.+|.. .+++++|+.+|++|+++ |.+
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 447788888888887 88899999999999988662 147889999999988 88899999999999888 777
Q ss_pred HHHHHHHHHHHHHc-C-----ChHHHHHHHHHHHcccccc
Q 009750 487 STAFYMQAVALAKL-D-----MHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 487 ~~~~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~p~~ 520 (527)
+.+++++|.+|... | ++++|+.+|++|++.....
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~ 201 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDT 201 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHH
Confidence 88899999988775 3 8899999999998876543
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.84 E-value=2e-08 Score=80.03 Aligned_cols=78 Identities=15% Similarity=0.000 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcC-------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVG-------TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAF 490 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~ 490 (527)
+...+..|..++..|+|..|+..|++|++.. .. ...++.++|.||+++|++++|+..++++++++|+++.+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 5678899999999999999999999999863 23 688999999999999999999999999999999999998
Q ss_pred HHHHHH
Q 009750 491 YMQAVA 496 (527)
Q Consensus 491 ~~~g~~ 496 (527)
.+++.+
T Consensus 84 ~n~~~~ 89 (104)
T 2v5f_A 84 GNLKYF 89 (104)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 888743
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.80 E-value=4.2e-08 Score=80.95 Aligned_cols=84 Identities=12% Similarity=0.030 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..++..|..++..|+|++|+..|+++++.+|. + +.+++++|.+|..+|++++|+..|+++++..|+++.+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 68889999999999999999999999999998 7 8999999999999999999999999999999999988877776
Q ss_pred HHHHcCCh
Q 009750 496 ALAKLDMH 503 (527)
Q Consensus 496 ~~~~~~~~ 503 (527)
+....++.
T Consensus 119 l~~l~~~~ 126 (129)
T 2xev_A 119 LQSIRLGQ 126 (129)
T ss_dssp HHHHC---
T ss_pred HHHHHhhh
Confidence 66555443
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.5e-08 Score=90.81 Aligned_cols=102 Identities=15% Similarity=0.066 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHh---CC---
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDV------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV---YP--- 484 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~---~p--- 484 (527)
.+..+..+|..++..|+|++|+.+|++++++ .+. ...++.++|.+|..+|++++|+..+++++++ .+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 4678889999999999999999999999983 333 5788999999999999999999999999998 44
Q ss_pred -CcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 485 -DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 485 -~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
....+++++|.++..+|++++|+..|++++++.+.
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 139 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQ 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999987654
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.9e-08 Score=81.59 Aligned_cols=83 Identities=12% Similarity=0.034 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc--HHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW--STAFYMQA 494 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~--~~~~~~~g 494 (527)
++..++.+|..++..|+|++|+..|+++++++|. +..+|+++|.+|..+|++++|+..|++++++.|+. ..+...+.
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~ 96 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQ 96 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHH
Confidence 3678899999999999999999999999999999 99999999999999999999999999999998854 44444444
Q ss_pred HHHHHc
Q 009750 495 VALAKL 500 (527)
Q Consensus 495 ~~~~~~ 500 (527)
..+..+
T Consensus 97 ~~l~~l 102 (115)
T 2kat_A 97 VFLRRL 102 (115)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 444433
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.1e-08 Score=102.85 Aligned_cols=107 Identities=10% Similarity=-0.013 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhC
Q 009750 411 WTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV-----GTM--VSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY 483 (527)
Q Consensus 411 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~~~--~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~ 483 (527)
+....+.+..+.+.+..+...|+|++|+..|++++++ .++ ....++.++|.+|..+|+|++|+..+++++++.
T Consensus 302 v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~ 381 (490)
T 3n71_A 302 VKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGY 381 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 3334455777778888899999999999999999975 233 135679999999999999999999999999753
Q ss_pred -----CC---cHHHHHHHHHHHHHcCChHHHHHHHHHHHccc
Q 009750 484 -----PD---WSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517 (527)
Q Consensus 484 -----p~---~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 517 (527)
|+ -...++++|.+|..+|+|++|+..|++||++-
T Consensus 382 ~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 382 MKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 44 46689999999999999999999999999753
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.1e-08 Score=102.28 Aligned_cols=100 Identities=11% Similarity=0.074 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc------H
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW------S 487 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~------~ 487 (527)
..+...|..++..|+|++|+.+|++++++.+.. ...++.++|.+|..+|++++|+..+++++++.|.. .
T Consensus 188 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 267 (406)
T 3sf4_A 188 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 267 (406)
T ss_dssp HHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHH
Confidence 344444555555555555555555554432220 01244445555555555555555555554444433 4
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHcccc
Q 009750 488 TAFYMQAVALAKLDMHKDAADMLKEAASLEE 518 (527)
Q Consensus 488 ~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 518 (527)
.+++.+|.+|..+|++++|+..|++++++.+
T Consensus 268 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 298 (406)
T 3sf4_A 268 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 298 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 4444455555555555555555555544433
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.75 E-value=9.6e-09 Score=103.20 Aligned_cols=100 Identities=10% Similarity=0.105 Sum_probs=62.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcH------H
Q 009750 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS------T 488 (527)
Q Consensus 420 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~------~ 488 (527)
.+..+|..++..|++++|+.+|++++++.+.. ...++.++|.+|..+|++++|+..+++++++.+... .
T Consensus 265 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 344 (411)
T 4a1s_A 265 ANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEAR 344 (411)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHH
Confidence 55666666666666666666666666654430 145566666666666666666666666666666663 2
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 489 AFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 489 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
+++.+|.+|..+|++++|+.+|++++++.++
T Consensus 345 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 375 (411)
T 4a1s_A 345 ACWSLGNAHSAIGGHERALKYAEQHLQLAXX 375 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHhh
Confidence 6666666666666666666666666666544
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.5e-08 Score=99.36 Aligned_cols=105 Identities=11% Similarity=-0.047 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC------CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCC-----
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV------SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYP----- 484 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p----- 484 (527)
..+..++..|..++..|++++|+.+|.+|+++.+.. ...++.++|.+|..+|++++|++.+++|+++.+
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 218 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQND 218 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCH
Confidence 346667777777777777777777777777653220 245667777777777777777777777776532
Q ss_pred -CcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 485 -DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 485 -~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
....+++++|.+|..+|++++|+..|++|+++....
T Consensus 219 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 219 RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 124567777777777777777777777777665443
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.3e-08 Score=96.66 Aligned_cols=102 Identities=12% Similarity=0.103 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC------HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc-----
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS------PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----- 486 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~------~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~----- 486 (527)
+..+...|..++..|++++|+.+|++++++.+. . ..++.++|.++..+|++++|+..+++++++.+..
T Consensus 223 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 301 (338)
T 3ro2_A 223 RRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ-LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIG 301 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHH
Confidence 557888999999999999999999999987554 3 6788999999999999999999999999876544
Q ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 487 -STAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 487 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
..+++.+|.+|..+|++++|+..|++++++.++.
T Consensus 302 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 302 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhh
Confidence 5689999999999999999999999999988753
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=4.3e-08 Score=98.87 Aligned_cols=100 Identities=9% Similarity=-0.062 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhc-----CCCC--CHHHHHHHHHHHHhcCChHHHHHHHHHHHHh--------
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDV-----GTMV--SPTVYARRSLCHLMCDQPDAALRDAMQAQCV-------- 482 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~~~~--~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~-------- 482 (527)
+....+.+......|+|++|+..|++++++ .|+. -...+.++|.+|..+|+|++|+..+++++++
T Consensus 298 ~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~ 377 (433)
T 3qww_A 298 ARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY 377 (433)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC
Confidence 334444555556778999999999999974 3330 2567999999999999999999999999975
Q ss_pred CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccc
Q 009750 483 YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517 (527)
Q Consensus 483 ~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~ 517 (527)
.|+-...++++|.+|..+|+|++|+..|++|+++-
T Consensus 378 Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 378 SLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 24446689999999999999999999999999864
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.69 E-value=1.3e-07 Score=79.57 Aligned_cols=91 Identities=10% Similarity=-0.069 Sum_probs=84.9
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 009750 424 RGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 499 (527)
Q Consensus 424 ~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~ 499 (527)
+|..+...+.+++|+++|++|++. . ++.+++++|.+|.. .+++++|+++|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 888888889999999999999998 3 78999999999999 89999999999999987 789999999999999
Q ss_pred ----cCChHHHHHHHHHHHccccc
Q 009750 500 ----LDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 500 ----~~~~~~A~~~~~~al~l~p~ 519 (527)
.+++++|+.+|++|.++...
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCH
Confidence 99999999999999988654
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.67 E-value=1.6e-07 Score=91.03 Aligned_cols=75 Identities=12% Similarity=0.106 Sum_probs=66.8
Q ss_pred hhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 445 IDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 445 l~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
+..+|. ++.+|..+|.++...|++++|+..+++|++++|+ ..+|..+|.++...|++++|++.|++|+.++|...
T Consensus 270 ~~~~~~-~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 270 LPELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp CGGGTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred cccCCc-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 355666 7777888888888889999999999999999985 68889999999999999999999999999999754
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.64 E-value=4.3e-08 Score=80.56 Aligned_cols=69 Identities=13% Similarity=0.000 Sum_probs=66.5
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 452 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
.+..++.+|.++...|++++|+..++++++.+|+++.+++.+|.+|..+|++++|+..|+++++++|++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 467899999999999999999999999999999999999999999999999999999999999999976
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1.4e-07 Score=75.06 Aligned_cols=72 Identities=13% Similarity=-0.082 Sum_probs=65.6
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhC-------CCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 452 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVY-------PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~-------p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
++.-.+.+|..++..|+|..|+.+|++|++.. +..+.+++.+|.+|+++|++++|+..++++++++|++..+
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 45668899999999999999999999999863 4568999999999999999999999999999999998765
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.4e-07 Score=98.45 Aligned_cols=102 Identities=12% Similarity=0.047 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHH-HHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLC-HLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~-~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
..+...|..+.+.|++++|.+.|++|++..|. ....+...+.+ +...|++++|...|+++++..|+++.+|..+|.++
T Consensus 357 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~ 435 (530)
T 2ooe_A 357 LVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 435 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 47778888888888888888888888888666 66666666654 44689999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
..+|++++|...|++|++..|.+.
T Consensus 436 ~~~g~~~~Ar~~~~~al~~~~~~~ 459 (530)
T 2ooe_A 436 SHLNEDNNTRVLFERVLTSGSLPP 459 (530)
T ss_dssp TTTTCHHHHHHHHHHHHHSCCSCG
T ss_pred HhCCCHhhHHHHHHHHHhccCCCH
Confidence 999999999999999998866543
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.4e-07 Score=95.16 Aligned_cols=99 Identities=11% Similarity=0.011 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcC-----CCC--CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhC-----CC
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVG-----TMV--SPTVYARRSLCHLMCDQPDAALRDAMQAQCVY-----PD 485 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----~~~--~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~-----p~ 485 (527)
+.........+...|+|++|+..|++++++. |+. ...++.++|.+|..+|+|++|+..+++++++. |+
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 4455566667788999999999999999752 330 25679999999999999999999999999753 44
Q ss_pred ---cHHHHHHHHHHHHHcCChHHHHHHHHHHHcc
Q 009750 486 ---WSTAFYMQAVALAKLDMHKDAADMLKEAASL 516 (527)
Q Consensus 486 ---~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l 516 (527)
-...++++|.+|..+|++++|+..|++|+++
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 4668999999999999999999999999975
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.57 E-value=2e-07 Score=97.36 Aligned_cols=104 Identities=8% Similarity=-0.074 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHh-------hhhHH-------HHHHHHHHhhh-cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFR-------EKEFK-------TAVDCYSQFID-VGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQ 480 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~-------~~~~~-------~A~~~~~~al~-~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai 480 (527)
..+..++..|..+.. .|+++ +|+..|++|++ +.|. +..+|+.+|..+...|++++|...|++++
T Consensus 270 ~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~al 348 (530)
T 2ooe_A 270 HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLL 348 (530)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 347777778877775 67876 88888888887 6787 88888888888888888888888888888
Q ss_pred HhCCCcH-HHHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 481 CVYPDWS-TAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 481 ~~~p~~~-~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
++.|+++ .+|..+|.++..+|++++|+..|++|++..|.+
T Consensus 349 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~ 389 (530)
T 2ooe_A 349 AIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 389 (530)
T ss_dssp HSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred CccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc
Confidence 8888875 588888887777777777777777777766653
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=3e-07 Score=86.95 Aligned_cols=127 Identities=16% Similarity=0.060 Sum_probs=89.4
Q ss_pred CeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEEEEecCCCCHhHHhh
Q 009750 84 NVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF 162 (527)
Q Consensus 84 g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~ 162 (527)
+.||+..... .+..+.+|+-... ....+.+|..+|+.|. +--|.++++++.+.+..++|||+++|.++.+...
T Consensus 39 ~~v~rl~~~~---~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~ 112 (272)
T 4gkh_A 39 ATIYRLYGKP---NAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLE 112 (272)
T ss_dssp CEEEEEECCT---TCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHH
T ss_pred CeEEEEEecC---CCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccccc
Confidence 3699887765 5566889986533 2456889999999883 4447788999999999999999999988776543
Q ss_pred hcCCCCcCHHHHHHHHHHHHHHHHHhhhC---------------------------------------------------
Q 009750 163 HWENQTIEWAMRLRVALYIAEALDYCSSE--------------------------------------------------- 191 (527)
Q Consensus 163 ~~~~~~l~~~~~~~i~~~i~~aL~~lH~~--------------------------------------------------- 191 (527)
.. ......+..+++..|.-||+.
T Consensus 113 ~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (272)
T 4gkh_A 113 EY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKL 186 (272)
T ss_dssp HC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTT
T ss_pred CC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhc
Confidence 10 111223344444444444421
Q ss_pred ----C--CccccccCCCceEeCCCCCceeecccCccc
Q 009750 192 ----G--RPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 192 ----~--~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
. .++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 187 ~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 187 LPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 0 168999999999999877777999988643
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.6e-07 Score=88.26 Aligned_cols=97 Identities=13% Similarity=0.015 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhC-CCc-HHHHHHHHHH
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY-PDW-STAFYMQAVA 496 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~-p~~-~~~~~~~g~~ 496 (527)
+.....|..+...|+|++|.+.|+.++...|. .. +++.+|.++++.++|++|+..++.+++.. |.. ..+++++|.+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~a 180 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVA 180 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHH
Confidence 34556688999999999999999999999887 67 99999999999999999999999887753 222 4599999999
Q ss_pred HHHcCChHHHHHHHHHHHccc
Q 009750 497 LAKLDMHKDAADMLKEAASLE 517 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~ 517 (527)
+..+|++++|+..|++++...
T Consensus 181 l~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 181 AANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHTTCHHHHHHHHHHHHTST
T ss_pred HHHCCCHHHHHHHHHHHhcCC
Confidence 999999999999999998654
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=3.1e-07 Score=85.30 Aligned_cols=88 Identities=13% Similarity=0.026 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHhhhcCCCCC--HHHHHHHHHHHHhc-----CChHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHH-cCC
Q 009750 432 KEFKTAVDCYSQFIDVGTMVS--PTVYARRSLCHLMC-----DQPDAALRDAMQAQCVYPDW-STAFYMQAVALAK-LDM 502 (527)
Q Consensus 432 ~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~~~-----g~~~~A~~~~~~ai~~~p~~-~~~~~~~g~~~~~-~~~ 502 (527)
+...+|...+++||++||. . ..+|..+|..|.+. |+.++|.++|++||+++|+. ..+++.+|..|+. +|+
T Consensus 177 ~~l~~A~a~lerAleLDP~-~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd 255 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPS-YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN 255 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC
T ss_pred HhHHHHHHHHHHHHHhCCC-cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC
Confidence 4568999999999999998 5 45999999999995 99999999999999999975 9999999999988 599
Q ss_pred hHHHHHHHHHHHcccccc
Q 009750 503 HKDAADMLKEAASLEEKR 520 (527)
Q Consensus 503 ~~~A~~~~~~al~l~p~~ 520 (527)
+++|...+++|+..+|..
T Consensus 256 ~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 256 RAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHHcCCCCC
Confidence 999999999999999984
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=2.5e-07 Score=89.24 Aligned_cols=135 Identities=15% Similarity=0.040 Sum_probs=90.7
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCC---ccceeEEEEE-eCCeeeEEEE
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHK---RLANLIGYCC-DGDERLLVAE 150 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~-~~~~~~lv~E 150 (527)
+..++.|....||+. . ..+++|+.... .....+.+|+.+|+.|.+. .|.+++.++. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v---g-----~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV---N-----GDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE---T-----TTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE---C-----CEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 345677888899987 1 22888885321 1245789999999999642 3567777764 3456789999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC--------------------------------------
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-------------------------------------- 192 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~-------------------------------------- 192 (527)
|++|.+|..... ..++......++.++++.|..||+..
T Consensus 94 ~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 94 KVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 999988876321 12344444555555555555555321
Q ss_pred ---------------------CccccccCCCceEeCC---CCCc-eeecccCcccc
Q 009750 193 ---------------------RPLYHDLNAYRVLFDE---NGDP-RLSCFGLMKNS 223 (527)
Q Consensus 193 ---------------------~ivH~Dlkp~NIll~~---~~~~-kl~DFG~a~~~ 223 (527)
.++|+|++|.|||++. ++.+ .|+||+.+...
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1599999999999987 4554 89999987543
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.51 E-value=5.1e-07 Score=93.21 Aligned_cols=98 Identities=15% Similarity=-0.016 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHhhh---hHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCCCcHH
Q 009750 416 RDMLEARKRGDVAFREK---EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWST 488 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~ai~~~p~~~~ 488 (527)
..+..++.+|..++..| ++++|+.+|++|++. . ++.+++++|.+|.. .+++++|+.+|++|++. .++.
T Consensus 326 ~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~ 400 (490)
T 2xm6_A 326 GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSA 400 (490)
T ss_dssp TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHH
Confidence 34678889999998855 999999999999998 3 68999999999999 89999999999999986 4799
Q ss_pred HHHHHHHHHHH----cCChHHHHHHHHHHHcccc
Q 009750 489 AFYMQAVALAK----LDMHKDAADMLKEAASLEE 518 (527)
Q Consensus 489 ~~~~~g~~~~~----~~~~~~A~~~~~~al~l~p 518 (527)
+++++|.+|.. .+++++|+.+|++|++.+|
T Consensus 401 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 401 AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 99999999999 8999999999999999994
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.49 E-value=2.5e-07 Score=91.69 Aligned_cols=101 Identities=13% Similarity=0.029 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcC--------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCC-----
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVG--------TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD----- 485 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~----- 485 (527)
..+..+|..++..|+|++|+..|++++++. |. ...++.++|.++..+|++++|+..+++++++.+.
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 346788999999999999999999999864 22 4567889999999999999999999999999886
Q ss_pred cHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 486 WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 486 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
...+++.+|.++...|++++|+..|++++.+.+..
T Consensus 173 ~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 173 QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 35689999999999999999999999999987654
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.49 E-value=5.3e-07 Score=89.25 Aligned_cols=98 Identities=11% Similarity=0.024 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhc--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhC-------
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDV--------GTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVY------- 483 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~------- 483 (527)
..+..+|..++..|+|++|+..|++++++ .-- .++.++|.++..+|++++|+..+++++++.
T Consensus 54 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~ 130 (373)
T 1hz4_A 54 VATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL---WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ 130 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhcccc
Confidence 34445555555555555555555555431 112 234455555555555555555555555543
Q ss_pred -CCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 484 -PDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 484 -p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
|....++.++|.++..+|++++|+..|++++++.+.
T Consensus 131 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 131 LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred CcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 223444555555555555555555555555555443
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=3.7e-07 Score=90.12 Aligned_cols=84 Identities=6% Similarity=-0.026 Sum_probs=57.0
Q ss_pred cccC-CCCCCCeEEEEEec---CCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCC-C--CccceeEEEEEeC--
Q 009750 75 VSES-GEKAPNVVYKGRLQ---DGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLR-H--KRLANLIGYCCDG-- 142 (527)
Q Consensus 75 ~~~l-g~G~~g~Vy~~~~~---~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~-- 142 (527)
+..| +.|....+|+.... ++..+++.+++|+..... ......+.+|+.+|+.|. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3456 77888899988753 100015668889865432 112356889999999883 3 3577888887665
Q ss_pred -CeeeEEEEecCCCCHh
Q 009750 143 -DERLLVAEYMPNDTLA 158 (527)
Q Consensus 143 -~~~~lv~E~~~~g~L~ 158 (527)
+..++||||++|.+|.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=2e-06 Score=86.16 Aligned_cols=77 Identities=17% Similarity=0.100 Sum_probs=51.7
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-------CChHHHHHHHHHhhcCC-C-Cc-cceeEEEEEeCC
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-------PDPKQFADEAWGVGKLR-H-KR-LANLIGYCCDGD 143 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~E~~~l~~l~-H-~n-Iv~l~~~~~~~~ 143 (527)
.+..+|.|.++.||++.... +++.|+||....... ...+++..|+++|..+. + +. +.+++.+ +.+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~---~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~ 108 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQE---HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTE 108 (397)
T ss_dssp EEEECCSSSSEEEEEEEC-------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETT
T ss_pred EEEECCCCceEEEEEEEECC---CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCC
Confidence 35678999999999997654 456799998653221 23456788999998883 2 33 4456544 455
Q ss_pred eeeEEEEecCCC
Q 009750 144 ERLLVAEYMPND 155 (527)
Q Consensus 144 ~~~lv~E~~~~g 155 (527)
..++||||+++.
T Consensus 109 ~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 MAVTVMEDLSHL 120 (397)
T ss_dssp TTEEEECCCTTS
T ss_pred ccEEEEEeCCCc
Confidence 678999999874
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.40 E-value=1e-06 Score=89.98 Aligned_cols=96 Identities=8% Similarity=0.015 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHhhh---hHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhc----CChHHHHHHHHHHHHhCCCcHHHH
Q 009750 418 MLEARKRGDVAFREK---EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC----DQPDAALRDAMQAQCVYPDWSTAF 490 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~----g~~~~A~~~~~~ai~~~p~~~~~~ 490 (527)
+..++.+|..+...| ++++|+..|++|++.++. .+..++++|.+|... +++++|+..|+++. |+++.++
T Consensus 176 ~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~ 251 (452)
T 3e4b_A 176 DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASW 251 (452)
T ss_dssp TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHH
T ss_pred HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 446677777777777 777777777777777777 677777777777665 67777777777776 7777777
Q ss_pred HHHHHH-H--HHcCChHHHHHHHHHHHccc
Q 009750 491 YMQAVA-L--AKLDMHKDAADMLKEAASLE 517 (527)
Q Consensus 491 ~~~g~~-~--~~~~~~~~A~~~~~~al~l~ 517 (527)
+++|.+ | ...+++++|+.+|++|++.+
T Consensus 252 ~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 252 VSLAQLLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHHHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 777777 3 45677777777777777544
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.1e-06 Score=68.17 Aligned_cols=69 Identities=4% Similarity=-0.075 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHhhhh---HHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc
Q 009750 417 DMLEARKRGDVAFREKE---FKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW 486 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~ 486 (527)
+++.+...|.+++..++ .++|...+++|++++|. +..+++.+|..+++.|+|++|+..++++++.+|..
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 46788889999976665 79999999999999999 99999999999999999999999999999999984
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.36 E-value=1.4e-06 Score=73.14 Aligned_cols=82 Identities=9% Similarity=-0.007 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHhhh---hHHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHH
Q 009750 417 DMLEARKRGDVAFREK---EFKTAVDCYSQFIDVG-TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
+.+..++.|..+.+.+ ++++++..++..++.+ |..+.+++|++|.+|+++|+|++|+++++++|+++|+|.++...
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 3678888999999977 8899999999999998 63368999999999999999999999999999999999999887
Q ss_pred HHHHHH
Q 009750 493 QAVALA 498 (527)
Q Consensus 493 ~g~~~~ 498 (527)
+-.+-.
T Consensus 111 k~~ie~ 116 (152)
T 1pc2_A 111 ERLIDK 116 (152)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.36 E-value=4.7e-07 Score=92.75 Aligned_cols=105 Identities=10% Similarity=0.016 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHHh-----C
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDV-----GTM--VSPTVYARRSLCHLMCDQPDAALRDAMQAQCV-----Y 483 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~~~--~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~-----~ 483 (527)
..+..+..+|.++...|+|++|+.+|+++|++ .++ +-...++|+|.+|..+|+|++|+..|++|+++ -
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 34788999999999999999999999999975 232 13567999999999999999999999999974 4
Q ss_pred CCc---HHHHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 484 PDW---STAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 484 p~~---~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
|++ .+...+++.++.++++|++|...|.++.+-.-+|
T Consensus 429 ~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~ 468 (490)
T 3n71_A 429 PSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNN 468 (490)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 565 5567899999999999999999999987644333
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.35 E-value=2.3e-06 Score=71.84 Aligned_cols=80 Identities=15% Similarity=0.102 Sum_probs=72.5
Q ss_pred hhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCChHHH
Q 009750 431 EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK----LDMHKDA 506 (527)
Q Consensus 431 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~----~~~~~~A 506 (527)
.+++++|+.+|++|.+..+. .+ . +|.+|...+.+++|+++|++|.+. .++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a--~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FG--C--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-TH--H--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hh--h--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 47899999999999999655 33 3 999999999999999999999987 899999999999999 8999999
Q ss_pred HHHHHHHHccc
Q 009750 507 ADMLKEAASLE 517 (527)
Q Consensus 507 ~~~~~~al~l~ 517 (527)
+.+|++|.+..
T Consensus 81 ~~~~~~Aa~~g 91 (138)
T 1klx_A 81 AQYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 99999999763
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.34 E-value=2.1e-06 Score=69.35 Aligned_cols=92 Identities=10% Similarity=0.055 Sum_probs=79.3
Q ss_pred hhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHH---HHHHHHHHHHhC-C-CcHHHHHHHHHHHHHcCChHHH
Q 009750 432 KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDA---ALRDAMQAQCVY-P-DWSTAFYMQAVALAKLDMHKDA 506 (527)
Q Consensus 432 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~---A~~~~~~ai~~~-p-~~~~~~~~~g~~~~~~~~~~~A 506 (527)
.....+.+.|..++..++. ...+-+++|.++.+..+... ++..++..++.+ | ..-+.+|.+|..++++|+|++|
T Consensus 15 ~~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A 93 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHH
Confidence 4456677777888777676 89999999999999888777 999999988877 5 6788999999999999999999
Q ss_pred HHHHHHHHcccccccccc
Q 009750 507 ADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 507 ~~~~~~al~l~p~~~~~~ 524 (527)
+.+++..|+++|+|..+.
T Consensus 94 ~~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 94 LKYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhCCCCHHHH
Confidence 999999999999987653
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.32 E-value=4.4e-06 Score=86.16 Aligned_cols=97 Identities=10% Similarity=-0.109 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHh----hhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCCCcH
Q 009750 416 RDMLEARKRGDVAFR----EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWS 487 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~ai~~~p~~~ 487 (527)
.++..++.+|..++. .+++++|+.+|++|++. . ++.+++++|.+|.. .+++++|+..|+++++. +++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 458889999999999 99999999999999986 3 67899999999998 89999999999999875 689
Q ss_pred HHHHHHHHHHHH----cCChHHHHHHHHHHHccc
Q 009750 488 TAFYMQAVALAK----LDMHKDAADMLKEAASLE 517 (527)
Q Consensus 488 ~~~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 517 (527)
.+++.+|.+|.. .+++++|+..|+++++.+
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 999999999998 889999999999999764
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.23 E-value=6.9e-06 Score=80.32 Aligned_cols=138 Identities=11% Similarity=0.087 Sum_probs=79.8
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCC--CccceeEE------EEEeCCeee
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH--KRLANLIG------YCCDGDERL 146 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~------~~~~~~~~~ 146 (527)
+..++.|..+.||++... +++ +++|+... ....+..|+.++..|.. -.+.+++. +....+..+
T Consensus 37 ~~~l~gG~~n~~~~v~~~----~~~-~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~ 107 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTD----SGA-VCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLF 107 (346)
T ss_dssp EEECC----CEEEEEEET----TEE-EEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEE
T ss_pred eeeccccccCcEEEEEeC----CCC-EEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEE
Confidence 345666778899998864 333 88998865 23455667777766631 12333332 123467789
Q ss_pred EEEEecCCCCHh-----------H---Hhhhc-C-C--C--------CcCHHHH--------------------------
Q 009750 147 LVAEYMPNDTLA-----------K---HLFHW-E-N--Q--------TIEWAMR-------------------------- 174 (527)
Q Consensus 147 lv~E~~~~g~L~-----------~---~l~~~-~-~--~--------~l~~~~~-------------------------- 174 (527)
+||||++|.++. . .++.. . . . ...|...
T Consensus 108 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (346)
T 2q83_A 108 VVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQL 187 (346)
T ss_dssp EEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred EEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHH
Confidence 999999986542 1 11110 0 0 0 0122110
Q ss_pred -----HHHHHHHHHHHHHhhh-------------CCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 175 -----LRVALYIAEALDYCSS-------------EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 175 -----~~i~~~i~~aL~~lH~-------------~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
..+...+..++.+|+. .. ++|+|+++.|||++.++.+.|+||+.+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 188 YLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPN-LCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCC-EECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCc-eecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111223345666652 34 89999999999998888999999997643
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.23 E-value=3.8e-06 Score=93.53 Aligned_cols=57 Identities=12% Similarity=0.093 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQ 480 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai 480 (527)
...+++.|.++.+.|+|++|+.+|.+| + ++..|..+|.++.++|+|++|++++..|+
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mAr 1161 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMAR 1161 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344444455555555555555554443 2 34444444445555555555544444443
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.21 E-value=3.8e-06 Score=85.71 Aligned_cols=94 Identities=12% Similarity=-0.110 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHH-H--HhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcC-----ChHHHHHHHHHHHHhCCCcH
Q 009750 416 RDMLEARKRGDV-A--FREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD-----QPDAALRDAMQAQCVYPDWS 487 (527)
Q Consensus 416 ~~~~~~~~~g~~-~--~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g-----~~~~A~~~~~~ai~~~p~~~ 487 (527)
.++..++.+|.. + ...+++++|+.+|++|++. . ++.+++++|.+|. .| ++++|+++|++|+ +.++
T Consensus 246 g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g-~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~ 318 (452)
T 3e4b_A 246 GYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--D-QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREV 318 (452)
T ss_dssp GSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCH
T ss_pred CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCH
Confidence 345566666666 3 3566666666666666654 2 4566666666666 34 6666666666666 6666
Q ss_pred HHHHHHHHHHHH----cCChHHHHHHHHHHHcc
Q 009750 488 TAFYMQAVALAK----LDMHKDAADMLKEAASL 516 (527)
Q Consensus 488 ~~~~~~g~~~~~----~~~~~~A~~~~~~al~l 516 (527)
.+++++|.+|.. ..++++|+.+|++|.+.
T Consensus 319 ~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 319 AADYYLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 666666666655 33666666666666654
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.09 E-value=1.5e-05 Score=88.89 Aligned_cols=89 Identities=15% Similarity=0.234 Sum_probs=75.2
Q ss_pred HHHHHhhhhHHHHHHHHHHh--------------------hhcC--CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHh
Q 009750 425 GDVAFREKEFKTAVDCYSQF--------------------IDVG--TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCV 482 (527)
Q Consensus 425 g~~~~~~~~~~~A~~~~~~a--------------------l~~~--~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~ 482 (527)
|..+...|.|++|...|+++ ++.. .. .+.+|+++|.++...|++++|+..|.+|
T Consensus 1056 A~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn-~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1056 ANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCN-EPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 77777777777777666663 2211 33 6789999999999999999999999886
Q ss_pred CCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 483 YPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 483 ~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
+++.+|+++|.++..+|+|++|+++|.+|.+.+++
T Consensus 1132 --dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 --DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred --CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999988865
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.07 E-value=3e-05 Score=73.74 Aligned_cols=101 Identities=7% Similarity=-0.112 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCC--CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCC------cHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGT--MVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPD------WSTA 489 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~--~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~------~~~~ 489 (527)
...++..|.++...|++++|++.+.++|..+| . +.+++..++.+++++|+.+.|.+.+++..+.+|+ ..-.
T Consensus 100 ~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~ 178 (310)
T 3mv2_B 100 PYELYLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMIL 178 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHH
Confidence 34456788888888888888888888888876 5 7788888888888888888888888888888883 2233
Q ss_pred HHHHHHHHHHcC--ChHHHHHHHHHHHccccc
Q 009750 490 FYMQAVALAKLD--MHKDAADMLKEAASLEEK 519 (527)
Q Consensus 490 ~~~~g~~~~~~~--~~~~A~~~~~~al~l~p~ 519 (527)
++.-|.+.+..| ++++|...|+++.+..|+
T Consensus 179 ~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 179 NLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 333344466666 888888888888777765
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.5e-05 Score=67.26 Aligned_cols=95 Identities=11% Similarity=-0.060 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC--------CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhC---CC-
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--------SPTVYARRSLCHLMCDQPDAALRDAMQAQCVY---PD- 485 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~--------~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~---p~- 485 (527)
.-.+++....++..|.|+.|+-....++.+...+ .+.+++.+|.+++..++|..|...|++||... +.
T Consensus 20 ~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 3457778888999999999999999988664221 13478999999999999999999999997532 11
Q ss_pred ---------------------cHHHHHHHHHHHHHcCChHHHHHHHHH
Q 009750 486 ---------------------WSTAFYMQAVALAKLDMHKDAADMLKE 512 (527)
Q Consensus 486 ---------------------~~~~~~~~g~~~~~~~~~~~A~~~~~~ 512 (527)
+.+.-|.+|.||.+++++++|+..++.
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 237889999999999999999998765
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=98.04 E-value=1.3e-05 Score=79.70 Aligned_cols=103 Identities=13% Similarity=0.033 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHH
Q 009750 411 WTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAF 490 (527)
Q Consensus 411 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~ 490 (527)
.......+..+..+|.++++.|+|++|++.|++| . ++..|...+.++...|+++.|...... |...|++ .
T Consensus 141 A~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l 210 (449)
T 1b89_A 141 AKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---L 210 (449)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---H
T ss_pred HHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---H
Confidence 3334455678888999999999999999999999 3 678899999999999999999776664 3355544 4
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 491 YMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 491 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
..+..+|...|++++|+..|+++|.+|+.+-..
T Consensus 211 ~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ 243 (449)
T 1b89_A 211 EELINYYQDRGYFEELITMLEAALGLERAHMGM 243 (449)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHH
Confidence 467889999999999999999999999876443
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.7e-05 Score=74.81 Aligned_cols=75 Identities=13% Similarity=0.020 Sum_probs=59.6
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC---CCccceeEEEEEeCCeeeEEEEe
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR---HKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+..++.|....+|+... ++..+++|+.... ....+..|+..|+.|. ...+.+++.++...+..++||||
T Consensus 41 ~~~l~gG~~n~~y~v~~-----~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~ 112 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-----EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA 112 (312)
T ss_dssp EEEECCSSSSEEEEEES-----SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred eEEeCCccceeeeEEEE-----CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence 45678899999999875 3455888986543 2567899999999983 36788999998888889999999
Q ss_pred cCCCCH
Q 009750 152 MPNDTL 157 (527)
Q Consensus 152 ~~~g~L 157 (527)
+++..+
T Consensus 113 l~G~~~ 118 (312)
T 3jr1_A 113 LNKSKN 118 (312)
T ss_dssp CCCCCC
T ss_pred ccCCCC
Confidence 999764
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.97 E-value=3.3e-05 Score=73.43 Aligned_cols=96 Identities=10% Similarity=-0.026 Sum_probs=77.7
Q ss_pred HHHHHHHHHHhhh--hHHHHHHHHHHhhhcCCCCC--HHHHHHHHHHHHhcCChHHHHHHHHHHHHh----------CCC
Q 009750 420 EARKRGDVAFREK--EFKTAVDCYSQFIDVGTMVS--PTVYARRSLCHLMCDQPDAALRDAMQAQCV----------YPD 485 (527)
Q Consensus 420 ~~~~~g~~~~~~~--~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~----------~p~ 485 (527)
.....|.+.+..| ++.+|...|+++.+..|. . ...+++ +++++|++++|.+.+++++++ +|+
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~ 253 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQTFPT-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLY 253 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSS
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCC
Confidence 3334455566666 999999999998877554 2 334444 899999999999999988776 588
Q ss_pred cHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 486 WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 486 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
+++++.++..+...+|+ +|.++++++.+++|++.
T Consensus 254 ~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 254 KPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp HHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred CHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 99999999999999997 89999999999999875
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.94 E-value=3.3e-05 Score=77.74 Aligned_cols=100 Identities=9% Similarity=0.015 Sum_probs=81.6
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcCCC-----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHHh------CCCcHHH
Q 009750 421 ARKRGDVAFREKEFKTAVDCYSQFIDVGTM-----VSPTVYARRSLCHLMCDQPDAALRDAMQAQCV------YPDWSTA 489 (527)
Q Consensus 421 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~------~p~~~~~ 489 (527)
....|..+...|++++|+..+++++..... ....++.++|.+|...|+|++|+..+++++.. .+....+
T Consensus 98 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~ 177 (434)
T 4b4t_Q 98 KTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDV 177 (434)
T ss_dssp HHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 344566666778888888888888764221 13678999999999999999999999999875 4556789
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 490 FYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 490 ~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
+..+|.+|..+|+|++|...|++++.+.+..
T Consensus 178 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 178 HLLESKVYHKLRNLAKSKASLTAARTAANSI 208 (434)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999887653
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.2e-05 Score=80.97 Aligned_cols=101 Identities=10% Similarity=0.028 Sum_probs=71.0
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC----------------HHHHHHHHHHHHhcCChHHHHHHHHHHHHhC
Q 009750 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS----------------PTVYARRSLCHLMCDQPDAALRDAMQAQCVY 483 (527)
Q Consensus 420 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~----------------~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~ 483 (527)
...++|..+.+.|+|++|++.|.++++..+... ..++.++|.+|...|++++|++.+.+++++.
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~ 85 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYM 85 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 445667777788888888888888887766521 2357778888888888888888888887766
Q ss_pred CCcHH------HHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 484 PDWST------AFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 484 p~~~~------~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
+...+ +...+|.++...|++++|+..+++++...++.
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 86 MQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp HTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 55433 34456666667777777777777777665543
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.89 E-value=7.9e-05 Score=75.06 Aligned_cols=74 Identities=15% Similarity=0.132 Sum_probs=45.8
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-------CChHHHHHHHHHhhcC---CCCccceeEEEEEeCC
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-------PDPKQFADEAWGVGKL---RHKRLANLIGYCCDGD 143 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~ 143 (527)
-+..+|.|..+.||++.. +++.++||....... ........|.+++..+ ....+.+++.+. .+
T Consensus 38 ~i~~l~~G~~n~vyrv~~-----~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~ 110 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-----SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RT 110 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-----SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TT
T ss_pred EEEEccCCCcEEEEEEEc-----CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CC
Confidence 456789999999999964 346699994332111 1112333344444333 234567777765 56
Q ss_pred eeeEEEEec-CC
Q 009750 144 ERLLVAEYM-PN 154 (527)
Q Consensus 144 ~~~lv~E~~-~~ 154 (527)
..++||||+ ++
T Consensus 111 ~~~lv~e~l~~g 122 (420)
T 2pyw_A 111 MALIGMRYLEPP 122 (420)
T ss_dssp TTEEEECCCCTT
T ss_pred ccEEEEeecCCc
Confidence 789999999 76
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.77 E-value=4.5e-06 Score=83.06 Aligned_cols=77 Identities=17% Similarity=0.141 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 009750 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 499 (527)
Q Consensus 420 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~ 499 (527)
.+...|..++..|+|++|..+|.++ + .|..+|.|+.++|+|++|++.+.+| .++.+|...+.++..
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----~-----n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~ 189 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----S-----NFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVD 189 (449)
T ss_dssp -------------CTTTHHHHHHHT----T-----CHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----h-----hHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHH
Confidence 4445555555555555555555544 1 2445555555555555555555554 244555555555555
Q ss_pred cCChHHHHHHH
Q 009750 500 LDMHKDAADML 510 (527)
Q Consensus 500 ~~~~~~A~~~~ 510 (527)
.|+++.|....
T Consensus 190 ~~ef~lA~~~~ 200 (449)
T 1b89_A 190 GKEFRLAQMCG 200 (449)
T ss_dssp TTCHHHHHHTT
T ss_pred cCcHHHHHHHH
Confidence 55555554433
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00018 Score=58.20 Aligned_cols=73 Identities=7% Similarity=-0.035 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHhcCCh---HHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 451 VSPTVYARRSLCHLMCDQP---DAALRDAMQAQCVYPD-WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 451 ~~~~~~~~~~~~~~~~g~~---~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
+.+.+-++.|.++.+..+. .+++..++..++..|. .-+.+|.+|..++++|+|++|+.+.+..|+++|+|..+
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA 114 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 114 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHH
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHH
Confidence 3567777777777766544 3577777777777773 46777777777777777777777777777777777654
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.74 E-value=6.9e-05 Score=71.31 Aligned_cols=75 Identities=23% Similarity=0.282 Sum_probs=55.2
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-C--CccceeEEEEEeCCeeeEEEEe
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-H--KRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+..+|.|..+.||+.+.. +|+.|.||+...........|..|+..|+.|. . -.+.+++++. ..++||||
T Consensus 20 v~~~g~G~~~~vyrv~l~----DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELA----DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEETTEEEEEEEET----TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred EEecCCCCCeEEEEEEEC----CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 556799999999999987 67789999876554444457899999999884 2 2355555542 34799999
Q ss_pred cCCCCH
Q 009750 152 MPNDTL 157 (527)
Q Consensus 152 ~~~g~L 157 (527)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987653
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00032 Score=57.44 Aligned_cols=72 Identities=7% Similarity=-0.028 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHhcCChH---HHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccccc
Q 009750 452 SPTVYARRSLCHLMCDQPD---AALRDAMQAQCVYP-DWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~---~A~~~~~~ai~~~p-~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~ 523 (527)
...+-++.|.++.+..+.. +++..++..++..| ..-+.+|.+|..++++|+|++|..+.+..|+++|+|..+
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA 113 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 113 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHH
Confidence 6777888888887766543 57777888777777 456777888888888888888888888888888877654
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00012 Score=64.92 Aligned_cols=100 Identities=16% Similarity=0.050 Sum_probs=67.2
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHh-hhCCCccccccCCCceEeCCCCCceeecccCccccCCCCccccCCc
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA 234 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~l-H~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~t~~ 234 (527)
+|.++|.. ...++++++++.++.|.+.+|.-+ +... -..+=+.|..|+|..+|.|.+.+ +.+ ......
T Consensus 34 SL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~~ 102 (229)
T 2yle_A 34 SLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEPP 102 (229)
T ss_dssp EHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-ccc--------cccccC
Confidence 79999975 678999999999999999998776 2222 22334457999999999887764 111 012335
Q ss_pred cCCcccccCCcCCCCcccchhhHHHHHHHhCCC
Q 009750 235 YTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH 267 (527)
Q Consensus 235 y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~ 267 (527)
+.|||... ...+.+.-|||||++||..+--..
T Consensus 103 ~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 103 PVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp ----CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 67888763 344567789999999999986544
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00018 Score=69.46 Aligned_cols=159 Identities=13% Similarity=0.061 Sum_probs=90.1
Q ss_pred cccCHHHHHHHhcCCCccc--ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCc-
Q 009750 55 AEFSLADLRAATNNFSSDF--IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR- 131 (527)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~n- 131 (527)
..++.+++......|.... -+..|+.|....+|+....+ + .+++|+.... ...+.+..|+.++..|...+
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~----g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~ 77 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK----D-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGL 77 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS----C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCC----c-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCC
Confidence 4567777777777665422 24567778888999988653 3 4789988653 12356778888888773212
Q ss_pred -cceeEEE------EEeCCeeeEEEEecCCCCHhH-----------H---hhhc--C--CC-----C-cCHHHHHH----
Q 009750 132 -LANLIGY------CCDGDERLLVAEYMPNDTLAK-----------H---LFHW--E--NQ-----T-IEWAMRLR---- 176 (527)
Q Consensus 132 -Iv~l~~~------~~~~~~~~lv~E~~~~g~L~~-----------~---l~~~--~--~~-----~-l~~~~~~~---- 176 (527)
+.+++.. ....+..+++|+|++|..+.. . ++.. . .. . ..|.....
T Consensus 78 ~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 157 (322)
T 2ppq_A 78 SCPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEE 157 (322)
T ss_dssp CCCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGG
T ss_pred CCCcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHH
Confidence 2333311 123466789999999865321 0 1110 0 00 0 11221100
Q ss_pred --------HHHHHHHHHHHhhh-------CCCccccccCCCceEeCCCCCceeecccCcc
Q 009750 177 --------VALYIAEALDYCSS-------EGRPLYHDLNAYRVLFDENGDPRLSCFGLMK 221 (527)
Q Consensus 177 --------i~~~i~~aL~~lH~-------~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~ 221 (527)
+...+...+..++. .+ ++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 158 ~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~-liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 158 RADEVEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GGGGTSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHhhhhhhHHHHHHHHHHHHhhCcccCCcc-cCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113344455542 23 8999999999999987666899998764
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00028 Score=65.54 Aligned_cols=79 Identities=8% Similarity=-0.038 Sum_probs=63.7
Q ss_pred HHHhhh-cCCCCCHHHHHHHHHHHHh---c--CC------hHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHc-----C
Q 009750 441 YSQFID-VGTMVSPTVYARRSLCHLM---C--DQ------PDAALRDAMQAQCVYPD--WSTAFYMQAVALAKL-----D 501 (527)
Q Consensus 441 ~~~al~-~~~~~~~~~~~~~~~~~~~---~--g~------~~~A~~~~~~ai~~~p~--~~~~~~~~g~~~~~~-----~ 501 (527)
+..++. .+|. +.++++..|.+... . |. ...|...+++|++++|+ +..+|..+|.+|... |
T Consensus 140 ~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gG 218 (301)
T 3u64_A 140 LHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG 218 (301)
T ss_dssp HHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTC
T ss_pred HHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCC
Confidence 345553 4555 78887777776643 2 33 47899999999999999 577999999999996 9
Q ss_pred ChHHHHHHHHHHHcccccc
Q 009750 502 MHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 502 ~~~~A~~~~~~al~l~p~~ 520 (527)
+.++|.+.|++||+++|+.
T Consensus 219 d~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999974
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00072 Score=65.41 Aligned_cols=98 Identities=14% Similarity=0.064 Sum_probs=60.3
Q ss_pred ccccCHHHHHHHhcCCCcc--cccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCC--
Q 009750 54 FAEFSLADLRAATNNFSSD--FIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH-- 129 (527)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~--~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H-- 129 (527)
+...+.+++......+.-. .-+..++ |....||+.... +|+.+++|+..... ...+.+..|+.++..|..
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~----~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g 81 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE----DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDE 81 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT----TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC----CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcC
Confidence 4456666666665544321 1233456 778899988664 45568999986432 245678889998888832
Q ss_pred CccceeEEE-----EEeCCeeeEEEEecCCCCH
Q 009750 130 KRLANLIGY-----CCDGDERLLVAEYMPNDTL 157 (527)
Q Consensus 130 ~nIv~l~~~-----~~~~~~~~lv~E~~~~g~L 157 (527)
-.+.+++.. ....+..++||+|++|.++
T Consensus 82 ~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~~ 114 (328)
T 1zyl_A 82 VPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQF 114 (328)
T ss_dssp CSBCCCCCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred CeecceeecCCcEEEEECCEEEEEEEecCCCCC
Confidence 123444432 2234566889999988543
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00023 Score=57.41 Aligned_cols=81 Identities=7% Similarity=-0.061 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHhhhhHHH---HHHHHHHhhhcC-CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKT---AVDCYSQFIDVG-TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 493 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~---A~~~~~~al~~~-~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~ 493 (527)
.+..++.|..+.+..+-.+ +|..++..+..+ |...-+..|.+|..++++|+|++|..+++..|+++|+|.+|.-.+
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 5666777788777665555 999999999886 523679999999999999999999999999999999999998776
Q ss_pred HHHHH
Q 009750 494 AVALA 498 (527)
Q Consensus 494 g~~~~ 498 (527)
..+-.
T Consensus 115 ~~i~~ 119 (126)
T 1nzn_A 115 RLIDK 119 (126)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00017 Score=70.03 Aligned_cols=140 Identities=9% Similarity=-0.067 Sum_probs=72.9
Q ss_pred cccCCCCCCCe-EEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-C-CccceeEEEEEeCCeeeEEEEe
Q 009750 75 VSESGEKAPNV-VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-H-KRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 75 ~~~lg~G~~g~-Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H-~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+..++.|.... +|+.... +++.+++|...... .+.+..|+.++..|. + -.+.+++.+....+ ++|||+
T Consensus 23 ~~~l~gg~s~~~~~r~~~~----~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~ 93 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSP----TGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIED 93 (333)
T ss_dssp ECC--------CCEEEECT----TCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECC
T ss_pred eeECCCCCCCceEEEEEcC----CCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEee
Confidence 34454444443 6677643 24557777654322 134566777777773 2 23566776643333 789999
Q ss_pred cCCCCHhHHhhhcC------------------------CCCcCHHHHH-------HHH-------------HHHHHHHHH
Q 009750 152 MPNDTLAKHLFHWE------------------------NQTIEWAMRL-------RVA-------------LYIAEALDY 187 (527)
Q Consensus 152 ~~~g~L~~~l~~~~------------------------~~~l~~~~~~-------~i~-------------~~i~~aL~~ 187 (527)
+.+.++.+.+.... ...++..... .+. ..+...+..
T Consensus 94 l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 173 (333)
T 3csv_A 94 LGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQ 173 (333)
T ss_dssp CCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred CCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 97766654432100 0111111100 000 011112222
Q ss_pred h------hhCCCccccccCCCceEeCCC----CCceeecccCccccC
Q 009750 188 C------SSEGRPLYHDLNAYRVLFDEN----GDPRLSCFGLMKNSR 224 (527)
Q Consensus 188 l------H~~~~ivH~Dlkp~NIll~~~----~~~kl~DFG~a~~~~ 224 (527)
+ +... ++|+|+.+.|||++.+ +.+.|+||+.+....
T Consensus 174 l~~~~~~~~~~-lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 174 ILSAQLEGDMV-FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp HHHHHCCSCCE-EECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred HHHhcccCCCe-eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 2 1234 8999999999999874 678999999876543
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00022 Score=69.11 Aligned_cols=72 Identities=14% Similarity=-0.002 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAF 490 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~ 490 (527)
++..+...|..++..|++++|+..+++|+.++| +..+|..+|.++...|++++|++.|++|++++|..+..+
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~--s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~ 347 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEM--SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLY 347 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHH
Confidence 355667778888888999999999999999975 578899999999999999999999999999999886433
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00011 Score=73.93 Aligned_cols=84 Identities=10% Similarity=-0.047 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHHh-----CC
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDV-----GTM--VSPTVYARRSLCHLMCDQPDAALRDAMQAQCV-----YP 484 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~~~--~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~-----~p 484 (527)
.+..+..+|.++...|+|++|+.+|+++|++ .+. .-...++++|.+|..+|++++|+..+++|+++ -|
T Consensus 328 ~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~ 407 (429)
T 3qwp_A 328 QLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGR 407 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 4778888999999999999999999999965 222 03567999999999999999999999999874 46
Q ss_pred CcH---HHHHHHHHHHHHc
Q 009750 485 DWS---TAFYMQAVALAKL 500 (527)
Q Consensus 485 ~~~---~~~~~~g~~~~~~ 500 (527)
++| +++.+++.+..++
T Consensus 408 ~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 408 EHSLIEDLILLLEECDANI 426 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHH
Confidence 664 4556666666544
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00015 Score=72.84 Aligned_cols=74 Identities=8% Similarity=0.020 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHHh-----C
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDV-----GTM--VSPTVYARRSLCHLMCDQPDAALRDAMQAQCV-----Y 483 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~~~--~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~-----~ 483 (527)
..+..+..+|.+|..+|+|++|+.+|+++|++ .++ +-+..++|+|.+|..+|+|++|+..|++|+++ -
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG 417 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHG 417 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcC
Confidence 34778899999999999999999999999965 222 13567999999999999999999999999875 4
Q ss_pred CCcHHH
Q 009750 484 PDWSTA 489 (527)
Q Consensus 484 p~~~~~ 489 (527)
|++|..
T Consensus 418 ~~Hp~~ 423 (433)
T 3qww_A 418 KDHPYI 423 (433)
T ss_dssp TTCHHH
T ss_pred CCChHH
Confidence 777654
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00034 Score=66.94 Aligned_cols=71 Identities=17% Similarity=0.192 Sum_probs=44.5
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCcc-ceeEEEEEeCCeeeEEEEec-
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRL-ANLIGYCCDGDERLLVAEYM- 152 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lv~E~~- 152 (527)
+..|+.|....+|++ .. +++|+....... .....+|+.+++.+...++ .+++++ +.+.-++|+||+
T Consensus 23 i~~l~gG~tN~~~~~--~~-------~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~ 90 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA--GD-------LCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIA 90 (301)
T ss_dssp CEEEESCSSEEEEEE--TT-------EEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCT
T ss_pred eeEcCCcccccccee--ee-------EEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecC
Confidence 556678888999998 22 889987653211 1234568888887743233 455554 344457999999
Q ss_pred CCCCH
Q 009750 153 PNDTL 157 (527)
Q Consensus 153 ~~g~L 157 (527)
+|.+|
T Consensus 91 ~g~~l 95 (301)
T 3dxq_A 91 GAQTM 95 (301)
T ss_dssp TCEEC
T ss_pred CCccC
Confidence 66544
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00053 Score=67.60 Aligned_cols=142 Identities=14% Similarity=0.125 Sum_probs=83.3
Q ss_pred cccCCCCCCCeEEEEEecCC----CCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEEE
Q 009750 75 VSESGEKAPNVVYKGRLQDG----NDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~----~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+..+..|-...+|++....+ ..+++.+.+|+.... ......+.+|..+++.|. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 44667788889999987531 113467889986432 234566779999999883 3334567766643 2999
Q ss_pred EecCCCCHhHH--------------hh--hcC----CCCc--CHHHHHHHHHHHHH-------------------HHHHh
Q 009750 150 EYMPNDTLAKH--------------LF--HWE----NQTI--EWAMRLRVALYIAE-------------------ALDYC 188 (527)
Q Consensus 150 E~~~~g~L~~~--------------l~--~~~----~~~l--~~~~~~~i~~~i~~-------------------aL~~l 188 (527)
||++|.+|..- |. +.. .... -+.++.++..++-. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655311 10 001 1112 24555556554422 12232
Q ss_pred ----hhCC---CccccccCCCceEeCCC----CCceeecccCcc
Q 009750 189 ----SSEG---RPLYHDLNAYRVLFDEN----GDPRLSCFGLMK 221 (527)
Q Consensus 189 ----H~~~---~ivH~Dlkp~NIll~~~----~~~kl~DFG~a~ 221 (527)
.... .++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2211 27999999999999876 789999998763
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0019 Score=52.92 Aligned_cols=80 Identities=4% Similarity=-0.141 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHhh---hhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 418 MLEARKRGDVAFRE---KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 418 ~~~~~~~g~~~~~~---~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
.+..++.|..+.+. .+-.++|..++..+...|...-+..|.+|..++++|+|++|.++.+..|+++|+|.+|.-.+.
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 34445555565543 455689999999998888657899999999999999999999999999999999999877666
Q ss_pred HHH
Q 009750 495 VAL 497 (527)
Q Consensus 495 ~~~ 497 (527)
.+-
T Consensus 119 ~Ie 121 (144)
T 1y8m_A 119 MVE 121 (144)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00047 Score=69.41 Aligned_cols=77 Identities=16% Similarity=0.230 Sum_probs=51.5
Q ss_pred cccCCCCCCCeEEEEEecCCC----CCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCc-cceeEEEEEeCCeeeEEE
Q 009750 75 VSESGEKAPNVVYKGRLQDGN----DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR-LANLIGYCCDGDERLLVA 149 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~----~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~~lv~ 149 (527)
+..|+.|....||++....+. ..++.+.+|+.... ...+.+.+|..+++.|...+ ..++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 456778888999999875311 02467889987432 12256778999999984333 3667776542 3899
Q ss_pred EecCCCCH
Q 009750 150 EYMPNDTL 157 (527)
Q Consensus 150 E~~~~g~L 157 (527)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987444
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00067 Score=54.81 Aligned_cols=81 Identities=5% Similarity=-0.138 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHhh---hhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 419 LEARKRGDVAFRE---KEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 419 ~~~~~~g~~~~~~---~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
+.-++.|..+.+. .+..++|..++..++.+|...-+.++.+|.+++++|+|+.|.++.+..++++|+|.+|.-....
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 3444555555433 4667899999999988885468999999999999999999999999999999999998877666
Q ss_pred HHHH
Q 009750 496 ALAK 499 (527)
Q Consensus 496 ~~~~ 499 (527)
+-.+
T Consensus 121 Ie~k 124 (134)
T 3o48_A 121 VEDK 124 (134)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0014 Score=66.43 Aligned_cols=75 Identities=11% Similarity=0.048 Sum_probs=48.2
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCcc-ceeEEEEEeCCeeeEEEEecC
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRL-ANLIGYCCDGDERLLVAEYMP 153 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lv~E~~~ 153 (527)
+..|+.|-...+|++.... .+..+++|+...... ..-.-.+|..++..|...++ .++++++. + .+||||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~---~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMS---KQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETT---TTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECC---CCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 3456778889999998753 346788998754321 11123689999999964444 56777763 2 35999999
Q ss_pred CCCH
Q 009750 154 NDTL 157 (527)
Q Consensus 154 ~g~L 157 (527)
|.+|
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 8554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 527 | ||||
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-42 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 4e-39 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 6e-39 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 6e-39 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-38 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 6e-38 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-36 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-36 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 4e-36 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 9e-36 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-35 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-34 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-34 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-33 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-33 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 6e-33 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-32 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-32 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-32 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-32 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 5e-32 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 7e-32 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-31 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-31 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 5e-31 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 8e-31 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 8e-31 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 9e-31 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-30 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-28 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-27 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-27 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 6e-27 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-26 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-26 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-25 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-25 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-25 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-24 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-24 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-24 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-24 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-23 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-23 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-23 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 4e-23 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 5e-23 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-22 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-22 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 9e-22 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-21 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-21 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-21 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 9e-20 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-19 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 5e-17 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-16 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-16 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 7e-16 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 9e-16 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-14 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 3e-08 | |
| d1elwa_ | 117 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 2e-04 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 151 bits (383), Expect = 1e-42
Identities = 58/310 (18%), Positives = 115/310 (37%), Gaps = 37/310 (11%)
Query: 57 FSLADLRAATNNFSSDFIVSES------GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA 110
F+ D A F+ + +S G V G L+ ++A+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 111 WPDP-KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTI 169
+ F EA +G+ H + +L G +++ E+M N +L +
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 170 EWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSY 229
+ + IA + Y + ++ DL A +L + N ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 230 STN---------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTV 280
T + +T PE ++ + T S ++S+G V+ +++S P DM
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE-RPYWDM------ 237
Query: 281 PIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVS 340
+++++ ++ + + + L C Q + RP +V+
Sbjct: 238 ------------TNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN 285
Query: 341 TLAPLQNRPD 350
TL + P+
Sbjct: 286 TLDKMIRNPN 295
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (356), Expect = 4e-39
Identities = 58/282 (20%), Positives = 111/282 (39%), Gaps = 32/282 (11%)
Query: 71 SDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH 129
S+ V E G +V+ G + + +A+K + A + + F +EA + KL H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDK----VAIKTIREGAMSE-EDFIEEAEVMMKLSH 59
Query: 130 KRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS 189
+L L G C + LV E+M + L+ + + L + L + E + Y
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 190 SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNG 244
++ DL A L EN ++S FG+ + D + S+ + + PE
Sbjct: 119 EAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304
R + +S ++SFG ++ ++ S IP + ++ + +
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------------------SEVVEDISTG 218
Query: 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346
+T V+ + + C + P +RP L+ LA +
Sbjct: 219 FRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 260
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 6e-39
Identities = 60/278 (21%), Positives = 110/278 (39%), Gaps = 32/278 (11%)
Query: 71 SDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH 129
D + E G VV G+ + D +A+K + + + +F +EA + L H
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYD----VAIKMIKEGSMSE-DEFIEEAKVMMNLSH 58
Query: 130 KRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCS 189
++L L G C ++ EYM N L +L + L + + EA++Y
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE 117
Query: 190 SEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNG 244
S+ L+ DL A L ++ G ++S FGL + D + S+ + ++PPE L
Sbjct: 118 SKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304
+ + +S I++FG ++ ++ S +P +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERF-------------------TNSETAEHIAQG 217
Query: 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
L + V+ + C + ERP K L+S +
Sbjct: 218 LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 255
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 141 bits (357), Expect = 6e-39
Identities = 52/277 (18%), Positives = 110/277 (39%), Gaps = 29/277 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY+G + + +AVK + + ++F EA + +++H L L+G C
Sbjct: 32 EVYEGVWKKYS---LTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 87
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
++ E+M L +L Q + + L +A I+ A++Y + ++ DL A
Sbjct: 88 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNC 146
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYST-----NLAYTPPEYLRNGRVTPESVIFSFGTVL 259
L EN +++ FGL + + + +T PE L + + +S +++FG +L
Sbjct: 147 LVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 206
Query: 260 LDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 319
++ + P + +D+ + L++ V++
Sbjct: 207 WEIATYGMSP----------------YPGIDL---SQVYELLEKDYRMERPEGCPEKVYE 247
Query: 320 LASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVM 356
L C Q+ P +RP+ ++ + + V
Sbjct: 248 LMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 284
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (356), Expect = 1e-38
Identities = 56/303 (18%), Positives = 106/303 (34%), Gaps = 34/303 (11%)
Query: 62 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADE 120
+ ++F +SE G VV+K + +A K P Q E
Sbjct: 1 MELKDDDFE---KISELGAGNGGVVFKVSHKPSG---LVMARKLIHLEIKPAIRNQIIRE 54
Query: 121 AWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180
+ + + G E + E+M +L + L + I + +V++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIA 112
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--NLAYTPP 238
+ + L Y + + ++ D+ +L + G+ +L FG+ D + S +Y P
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG----------- 287
E L+ + +S I+S G L+++ G++ P D + G
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 232
Query: 288 --------ALDMIRGKNILHLMDSHLEGNFSSEEATVV----FDLASRCLQYEPRERPNT 335
+D I L+D + + V D ++CL P ER +
Sbjct: 233 PGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 292
Query: 336 KDL 338
K L
Sbjct: 293 KQL 295
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 6e-38
Identities = 58/265 (21%), Positives = 102/265 (38%), Gaps = 29/265 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V G + +AVK A + F EA + +LRH L L+G +
Sbjct: 22 DVMLGDYRG-----NKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 74
Query: 145 RL-LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
L +V EYM +L +L + L+ +L + EA++Y ++ DL A
Sbjct: 75 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARN 133
Query: 204 VLFDENGDPRLSCFGLMKN-SRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDL 262
VL E+ ++S FGL K S + + +T PE LR + + +S ++SFG +L ++
Sbjct: 134 VLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 193
Query: 263 LSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLAS 322
S +P + + + + D V+++
Sbjct: 194 YSFGRVPYPRIPLKD----------VVPRVEKGYKMDAPD-----GCPPA----VYEVMK 234
Query: 323 RCLQYEPRERPNTKDLVSTLAPLQN 347
C + RP+ L L ++
Sbjct: 235 NCWHLDAAMRPSFLQLREQLEHIKT 259
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (339), Expect = 2e-36
Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 32/275 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+ G +A+K P+ F EA + KLRH++L L + +
Sbjct: 32 EVWMGTWNGTTR----VAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP 85
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+V EYM +L L + + + +A IA + Y ++ DL A +
Sbjct: 86 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANI 144
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNGRVTPESVIFSFGTVL 259
L EN +++ FGL + D + + + +T PE GR T +S ++SFG +L
Sbjct: 145 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 204
Query: 260 LDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 319
+L + +P + + +L ++ E + D
Sbjct: 205 TELTTKGRVPYPGMVN-------------------REVLDQVERGYRMPCPPECPESLHD 245
Query: 320 LASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSY 354
L +C + EP ERP + L + L + P Y
Sbjct: 246 LMCQCWRKEPEERPTFEYLQAFLEDYFTSTE-PQY 279
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (338), Expect = 2e-36
Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 31/263 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+ G +AVK + + P F EA + +L+H+RL L +
Sbjct: 28 EVWMGYYNGHTK----VAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 81
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
++ EYM N +L L + L +A IAE + + ++ DL A +
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 140
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNGRVTPESVIFSFGTVL 259
L + +++ FGL + D + + + +T PE + G T +S ++SFG +L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 260 LDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 319
++++ P M + +N+ N E ++
Sbjct: 201 TEIVTHGR-IPYPGMTNPEVI--------------QNLERGYRMVRPDNCPEE----LYQ 241
Query: 320 LASRCLQYEPRERPNTKDLVSTL 342
L C + P +RP L S L
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVL 264
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (336), Expect = 4e-36
Identities = 55/274 (20%), Positives = 106/274 (38%), Gaps = 37/274 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG+ +AVK A + F +E + K RH + +GY
Sbjct: 23 TVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TA 75
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
+ +V ++ +L HL H E + +A A+ +DY + + H DL +
Sbjct: 76 PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYL--HAKSIIHRDLKS 132
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYST------NLAYTPPEYLR---NGRVTPESVI 252
+ E+ ++ FGL ++ + PE +R + +S +
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 253 FSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSE 312
++FG VL +L++G+ P ++ N + + G+ L S + N
Sbjct: 193 YAFGIVLYELMTGQ--LPYSNI---------NNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 313 EATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346
+ L + CL+ + ERP +++++ L
Sbjct: 242 ----MKRLMAECLKKKRDERPLFPQILASIELLA 271
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (335), Expect = 9e-36
Identities = 49/293 (16%), Positives = 100/293 (34%), Gaps = 35/293 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD- 143
V++G+ + +AVK F+ E + LRH+ + I +
Sbjct: 18 EVWRGKWRG-----EEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNG 71
Query: 144 ---ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG------RP 194
+ LV++Y + +L +L T+ +++AL A L + E
Sbjct: 72 TWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 128
Query: 195 LYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--------NLAYTPPEYL---- 241
+ H DL + +L +NG ++ GL Y PE L
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 188
Query: 242 --RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299
++ + I++ G V ++ I H+ + + +++ +R
Sbjct: 189 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ 248
Query: 300 LMDSHLEGNFSSEEAT-VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDV 351
+ ++ + S EA V+ + C R + TL+ L + +
Sbjct: 249 KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 2e-35
Identities = 57/284 (20%), Positives = 121/284 (42%), Gaps = 33/284 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
VY G L D + + AVK + + QF E + H + +L+G C +
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 144 ER-LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNA 201
L+V YM + L ++ E + L +A+ + + +S + H DL A
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS--KKFVHRDLAA 158
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--------LAYTPPEYLRNGRVTPESVIF 253
+ DE +++ FGL ++ D + S + + + E L+ + T +S ++
Sbjct: 159 RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 218
Query: 254 SFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE 313
SFG +L +L++ PP D+ ++ + +++G+ + L+ + +
Sbjct: 219 SFGVLLWELMTRGA-PPYPDVNTFDI--------TVYLLQGRRL-------LQPEYCPDP 262
Query: 314 ATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVML 357
++++ +C + RP+ +LVS ++ + + YV +
Sbjct: 263 ---LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 303
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 129 bits (325), Expect = 2e-34
Identities = 59/287 (20%), Positives = 99/287 (34%), Gaps = 33/287 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
VY R + +A+KK + + E + KLRH G
Sbjct: 30 AVYFARDVRNS---EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 86
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
LV EY H + ++ V + L Y S ++ D+ A
Sbjct: 87 EHTAWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKA 143
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLR---NGRVTPESVIFSFGTV 258
+L E G +L FG S+ + PE + G+ + ++S G
Sbjct: 144 GNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203
Query: 259 LLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF 318
++L K PP +M + + +I L+ SE
Sbjct: 204 CIELAERK--PPLFNMNAMSAL--------------YHIAQNESPALQSGHWSEYFR--- 244
Query: 319 DLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPRHEEA 365
+ CLQ P++RP ++ L+ L+ RP P+ +M I R ++A
Sbjct: 245 NFVDSCLQKIPQDRPTSEVLLKHRFVLRERP--PTVIMDLIQRTKDA 289
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 3e-34
Identities = 56/317 (17%), Positives = 115/317 (36%), Gaps = 32/317 (10%)
Query: 71 SDF-IVSESGEKAPNVVYKGR-LQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL 127
++F + G A VYKG + +G + +A+K+ + P K+ DEA+ + +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 128 RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDY 187
+ + L+G C +L+ + MP L + I L + IA+ ++Y
Sbjct: 69 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 188 CSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYL 241
+ DL A VL +++ FGL K + + + E +
Sbjct: 127 LEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 242 RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301
+ T +S ++S+G + +L++ P + + I ++
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKP----------------YDGIPA---SEISSIL 226
Query: 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIPR 361
+ V+ + +C + RP ++L+ + + P V+ G R
Sbjct: 227 EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ-RYLVIQGDER 285
Query: 362 HEEAPPTPQHPLSPMGD 378
PT + + D
Sbjct: 286 MHLPSPTDSNFYRALMD 302
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 1e-33
Identities = 50/267 (18%), Positives = 99/267 (37%), Gaps = 33/267 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V KG Q + +AVK A + EA + +L + + +IG C
Sbjct: 22 TVKKGYYQMKKVVKT-VAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA- 79
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202
+ +LV E L K+L +N+ ++ + + ++ + Y ++ DL A
Sbjct: 80 ESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAAR 136
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSF 255
VL ++S FGL K R ++Y + + PE + + + +S ++SF
Sbjct: 137 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 196
Query: 256 GTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEAT 315
G ++ + S P + + G + +++ +
Sbjct: 197 GVLMWEAFSYGQKP----------------YRGMK---GSEVTAMLEKGERMGCPAGCPR 237
Query: 316 VVFDLASRCLQYEPRERPNTKDLVSTL 342
++DL + C Y+ RP + L
Sbjct: 238 EMYDLMNLCWTYDVENRPGFAAVELRL 264
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 1e-33
Identities = 54/275 (19%), Positives = 101/275 (36%), Gaps = 30/275 (10%)
Query: 85 VVYKGRLQDGNDNR-RWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG L+ + + +A+K F EA +G+ H + L G
Sbjct: 22 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 81
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202
+++ EYM N ++ + + IA + Y ++ + DL A
Sbjct: 82 KPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAAR 139
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSF 255
+L + N ++S FGL + D + + +T PE + + T S ++SF
Sbjct: 140 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 199
Query: 256 GTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEAT 315
G V+ ++++ P + ++ ++ + +
Sbjct: 200 GIVMWEVMTYGERPY-------------------WELSNHEVMKAINDGFRLPTPMDCPS 240
Query: 316 VVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPD 350
++ L +C Q E RP D+VS L L PD
Sbjct: 241 AIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 275
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 125 bits (314), Expect = 6e-33
Identities = 69/316 (21%), Positives = 111/316 (35%), Gaps = 54/316 (17%)
Query: 58 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNR--RWIAVKKFTKHAWPD-P 114
L L NN V + GE A V++ R +AVK + A D
Sbjct: 4 KLLSLEYPRNNIE---YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ 60
Query: 115 KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT------ 168
F EA + + + + L+G C G L+ EYM L + L T
Sbjct: 61 ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120
Query: 169 ----------------IEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDP 212
+ A +L +A +A + Y S ++ DL L EN
Sbjct: 121 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGENMVV 179
Query: 213 RLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK 266
+++ FGL +N Y + + + PPE + R T ES ++++G VL ++ S
Sbjct: 180 KIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 239
Query: 267 HIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQ 326
P + +R NIL + N E +++L C
Sbjct: 240 LQPYYGMAHEE----------VIYYVRDGNILACPE-----NCPLE----LYNLMRLCWS 280
Query: 327 YEPRERPNTKDLVSTL 342
P +RP+ + L
Sbjct: 281 KLPADRPSFCSIHRIL 296
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 1e-32
Identities = 53/275 (19%), Positives = 109/275 (39%), Gaps = 37/275 (13%)
Query: 85 VVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCD 141
+VY+G + ++ +A+K + A + +F +EA + + + L+G
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 142 GDERLLVAEYMPNDTLAKHLFHW--------ENQTIEWAMRLRVALYIAEALDYCSSEGR 193
G L++ E M L +L + +++A IA+ + Y ++
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 154
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVT 247
++ DL A + E+ ++ FG+ ++ + Y + + PE L++G T
Sbjct: 155 -VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 248 PESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307
S ++SFG VL ++ + P L + +L D
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGLLDKPD----- 258
Query: 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
N +F+L C QY P+ RP+ +++S++
Sbjct: 259 NCPDM----LFELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (310), Expect = 1e-32
Identities = 52/283 (18%), Positives = 96/283 (33%), Gaps = 38/283 (13%)
Query: 72 DF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLR 128
D+ ++ G + K R + + + + K+ + + + E + +L+
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKS---DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 61
Query: 129 HKRLANLIGYCCDGDERLL--VAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEA 184
H + D L V EY LA + E Q ++ LRV + A
Sbjct: 62 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 121
Query: 185 LDYCSSEGR---PLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTP--- 237
L C + H DL V D + +L FGL + S++ TP
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 181
Query: 238 -PEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296
PE + +S I+S G +L +L + PP
Sbjct: 182 SPEQMNRMSYNEKSDIWSLGCLLYELCALM--PPFTAFSQKELA--------------GK 225
Query: 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLV 339
I + +S E + ++ +R L + RP+ ++++
Sbjct: 226 IREGKFRRIPYRYSDE----LNEIITRMLNLKDYHRPSVEEIL 264
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 1e-32
Identities = 59/281 (20%), Positives = 97/281 (34%), Gaps = 43/281 (15%)
Query: 71 SDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGK 126
DF I G+ VY R + +A+K K Q E
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSK---FILALKVLFKAQLEKAGVEHQLRREVEIQSH 62
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALD 186
LRH + L GY D L+ EY P T+ + L + +A AL
Sbjct: 63 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALS 120
Query: 187 YCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--LAYTPPEYLRNG 244
YC S+ ++ D+ +L G+ +++ FG ++ + + L Y PPE +
Sbjct: 121 YCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 179
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304
+ ++S G + + L GK PP
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGK--PP---------------------FEANTYQETYKRI 216
Query: 305 LEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVS 340
F+ +E A DL SR L++ P +RP ++++
Sbjct: 217 SRVEFTFPDFVTEGA---RDLISRLLKHNPSQRPMLREVLE 254
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (307), Expect = 5e-32
Identities = 46/274 (16%), Positives = 95/274 (34%), Gaps = 32/274 (11%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLA 133
I+ E G+ A VYK + ++ + A K + + + + E + H +
Sbjct: 16 IIGELGDGAFGKVYKAQNKETS---VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 72
Query: 134 NLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR 193
L+ + ++ E+ + + + + + V +AL+Y
Sbjct: 73 KLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKI 131
Query: 194 PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST----NLAYTPPEYL-----RNG 244
++ DL A +LF +GD +L+ FG+ + + PE + ++
Sbjct: 132 -IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 190
Query: 245 RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304
++ ++S G L+++ + PP H++ L I L
Sbjct: 191 PYDYKADVWSLGITLIEMAEIE--PPHHELNPMRV---------LLKIAKSEPPTLAQPS 239
Query: 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+SS D +CL+ R T L
Sbjct: 240 ---RWSSN----FKDFLKKCLEKNVDARWTTSQL 266
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 5e-32
Identities = 50/291 (17%), Positives = 98/291 (33%), Gaps = 52/291 (17%)
Query: 85 VVYKGRLQDGNDNRRW--IAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCC 140
V + +AVK + A + + E + +L H+ + NL+G C
Sbjct: 52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111
Query: 141 DGDERLLVAEYMPNDTLAKHLF---------------------HWENQTIEWAMRLRVAL 179
L+ EY L +L + + + L A
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171
Query: 180 YIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------ 232
+A+ +++ + H DL A VL ++ FGL ++ +Y
Sbjct: 172 QVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 229
Query: 233 LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMI 292
+ + PE L G T +S ++S+G +L ++ S P +
Sbjct: 230 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP------------------GIP 271
Query: 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343
N L+ + + + ++ + C ++ R+RP+ +L S L
Sbjct: 272 VDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (307), Expect = 7e-32
Identities = 61/280 (21%), Positives = 105/280 (37%), Gaps = 40/280 (14%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-KQFADEAWGVGKL-RHKRLANLIGYCCDG 142
V K R++ R A+K+ ++A D + FA E + KL H + NL+G C
Sbjct: 25 QVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR 83
Query: 143 DERLLVAEYMPNDTLAKHL--------------FHWENQTIEWAMRLRVALYIAEALDYC 188
L EY P+ L L + T+ L A +A +DY
Sbjct: 84 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL 143
Query: 189 SSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYLRNGR 245
S + ++ DL A +L EN +++ FGL + + + + E L
Sbjct: 144 SQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV 202
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305
T S ++S+G +L +++S P M + +
Sbjct: 203 YTTNSDVWSYGVLLWEIVSLGG-TPYCGMTCAELY--------------EKLPQGYRLEK 247
Query: 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
N E V+DL +C + +P ERP+ ++ +L +
Sbjct: 248 PLNCDDE----VYDLMRQCWREKPYERPSFAQILVSLNRM 283
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (303), Expect = 2e-31
Identities = 50/266 (18%), Positives = 97/266 (36%), Gaps = 31/266 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V +G + +A+K + D ++ EA + +L + + LIG C +
Sbjct: 24 SVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAE 81
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
+LV E L K L + + I + + ++ + Y + ++ DL A
Sbjct: 82 ALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARN 139
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFSFG 256
VL ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 140 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 199
Query: 257 TVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATV 316
+ + LS P + + G ++ ++ E
Sbjct: 200 VTMWEALSYGQKP----------------YKKMK---GPEVMAFIEQGKRMECPPECPPE 240
Query: 317 VFDLASRCLQYEPRERPNTKDLVSTL 342
++ L S C Y+ +RP+ + +
Sbjct: 241 LYALMSDCWIYKWEDRPDFLTVEQRM 266
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (301), Expect = 2e-31
Identities = 41/266 (15%), Positives = 90/266 (33%), Gaps = 34/266 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
VYKG + +A + + ++F +EA + L+H +
Sbjct: 24 TVYKGLD---TETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST 80
Query: 143 DER----LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH- 197
+ +LV E M + TL +L + ++ + I + L + + P+ H
Sbjct: 81 VKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHR 138
Query: 198 DLNAYRVLF-DENGDPRLSCFGLMKNSRDGKSYST--NLAYTPPEYLRNGRVTPESVIFS 254
DL + G ++ GL R + + + PE + +++
Sbjct: 139 DLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYA 197
Query: 255 FGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEA 314
FG +L++ + ++ P S + + + + E
Sbjct: 198 FGMCMLEMATSEY-PYSECQNAAQIY--------------RRVTSGVKPASFDKVAIPEV 242
Query: 315 TVVFDLASRCLQYEPRERPNTKDLVS 340
++ C++ ER + KDL++
Sbjct: 243 K---EIIEGCIRQNKDERYSIKDLLN 265
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (298), Expect = 5e-31
Identities = 50/272 (18%), Positives = 87/272 (31%), Gaps = 31/272 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
VV +G + +AVK P F E + L H+ L L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
+ +V E P +L R A+ +AE + Y S+ ++ DL A
Sbjct: 83 PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTN-------LAYTPPEYLRNGRVTPESVIFS 254
+L ++ FGLM+ + A+ PE L+ + S +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 255 FGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEA 314
FG L ++ + P L I + ++
Sbjct: 200 FGVTLWEMFTYGQEPWIGLNGSQ----------ILHKIDKEGERLPRPEDC-----PQD- 243
Query: 315 TVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346
++++ +C ++P +RP L L Q
Sbjct: 244 --IYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 273
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 120 bits (302), Expect = 8e-31
Identities = 45/259 (17%), Positives = 84/259 (32%), Gaps = 27/259 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VV++ + A K D + E + LRH L NL D +E
Sbjct: 41 VVHRVTERA---TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE 97
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+++ E+M L + + E+ + + + + L + ++ DL +
Sbjct: 98 MVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENI 155
Query: 205 LF--DENGDPRLSCFGLMKNSRDGKSYST---NLAYTPPEYLRNGRVTPESVIFSFGTVL 259
+F + + +L FGL + +S + PE V + ++S G +
Sbjct: 156 MFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 215
Query: 260 LDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFD 319
LLSG + + L + K+ MD S + D
Sbjct: 216 YILLSGLSPFGGEN-----------DDETLRNV--KSCDWNMDDSAFSGISED----GKD 258
Query: 320 LASRCLQYEPRERPNTKDL 338
+ L +P R
Sbjct: 259 FIRKLLLADPNTRMTIHQA 277
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 8e-31
Identities = 50/284 (17%), Positives = 96/284 (33%), Gaps = 45/284 (15%)
Query: 85 VVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCC 140
V + +D +AVK A + + E + L H + NL+G C
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 141 DGDERLLVAEYMPNDTLAKHLFHW----------------ENQTIEWAMRLRVALYIAEA 184
G L++ EY L L + ++ L + +A+
Sbjct: 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPP 238
+ + +S+ ++ DL A +L ++ FGL ++ ++ +Y + + P
Sbjct: 158 MAFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298
E + N T ES ++S+G L +L S P V
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------------------KFY 258
Query: 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
++ ++D+ C +P +RP K +V +
Sbjct: 259 KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 9e-31
Identities = 42/258 (16%), Positives = 96/258 (37%), Gaps = 29/258 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VY + +A+++ P + +E + + ++ + N + GDE
Sbjct: 35 TVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRV 204
+V EY+ +L + ++ V +AL++ S ++ D+ + +
Sbjct: 92 LWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNI 147
Query: 205 LFDENGDPRLSCFGLMKNSRDGKSYSTN----LAYTPPEYLRNGRVTPESVIFSFGTVLL 260
L +G +L+ FG +S + + PE + P+ I+S G + +
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI 207
Query: 261 DLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 320
+++ G+ PP + + + G ++ + + S D
Sbjct: 208 EMIEGE--PPYLNENPLRALYLIATNGTPELQNPEKL-------------SAIFR---DF 249
Query: 321 ASRCLQYEPRERPNTKDL 338
+RCL + +R + K+L
Sbjct: 250 LNRCLDMDVEKRGSAKEL 267
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 1e-30
Identities = 49/267 (18%), Positives = 99/267 (37%), Gaps = 28/267 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V++G + +A+K ++F EA + + H + LIG + +
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
++ E L + +++ A + A ++ AL Y S+ ++ D+ A
Sbjct: 81 PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARN 138
Query: 204 VLFDENGDPRLSCFGLMKNSRDGKSYSTN-----LAYTPPEYLRNGRVTPESVIFSFGTV 258
VL N +L FGL + D Y + + + PE + R T S ++ FG
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 259 LLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF 318
+ ++L P + + + I + + N ++
Sbjct: 199 MWEILMHGV-KPFQGVKNNDVI--------------GRIENGERLPMPPNCPPT----LY 239
Query: 319 DLASRCLQYEPRERPNTKDLVSTLAPL 345
L ++C Y+P RP +L + L+ +
Sbjct: 240 SLMTKCWAYDPSRRPRFTELKAQLSTI 266
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 2e-30
Identities = 54/281 (19%), Positives = 86/281 (30%), Gaps = 33/281 (11%)
Query: 69 FSSDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGK 126
F D+ +V GE A V + +AVK D P+ E
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKM 59
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALD 186
L H+ + G+ +G+ + L EY L + + + R + +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 117
Query: 187 YCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEY 240
Y G + D+ +L DE + ++S FGL R L Y PE
Sbjct: 118 YLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 241 LRNGRVTPESV-IFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299
L+ E V ++S G VL +L+G+ K L+ +
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK------ 230
Query: 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVS 340
S L + L P R D+
Sbjct: 231 --------KIDSA----PLALLHKILVENPSARITIPDIKK 259
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 114 bits (285), Expect = 2e-28
Identities = 57/318 (17%), Positives = 100/318 (31%), Gaps = 35/318 (11%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLA 133
I+ E G A VV++ R K D +E + +L H +L
Sbjct: 33 ILEELGSGAFGVVHRCVE---KATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 89
Query: 134 NLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR 193
NL D E +L+ E++ L + E+ + A + E L +
Sbjct: 90 NLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSI 148
Query: 194 PLYHDLNAYRVLFDENGDPR--LSCFGLMKNSRDGKS---YSTNLAYTPPEYLRNGRVTP 248
++ D+ ++ + + FGL + + + PE + V
Sbjct: 149 -VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGF 207
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308
+ +++ G + LLSG D + L + K D +
Sbjct: 208 YTDMWAIGVLGYVLLSGLSPFAGED-----------DLETLQNV--KRCDWEFDEDAFSS 254
Query: 309 FSSEEATVVFDLASRCLQYEPRERPNTKDLVS------TLAPLQNRPDVPSYVML--GIP 360
S E D LQ EPR+R D + + L +R Y + I
Sbjct: 255 VSPE----AKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIK 310
Query: 361 RHEEAPPTPQHPLSPMGD 378
P PQ + + +
Sbjct: 311 EKYADWPAPQPAIGRIAN 328
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (277), Expect = 1e-27
Identities = 41/270 (15%), Positives = 89/270 (32%), Gaps = 28/270 (10%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLA 133
I + G +V++ + K D E + RH+ +
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSK---KTYMAKFVKVKG-TDQVLVKKEISILNIARHRNIL 64
Query: 134 NLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR 193
+L +E +++ E++ + + + + + + + EAL + S
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNI 123
Query: 194 PLYHDLNAYRVLFDENGDPR--LSCFGLMKNSRDGKSYSTN---LAYTPPEYLRNGRVTP 248
+ D+ +++ + FG + + G ++ Y PE ++ V+
Sbjct: 124 -GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVST 182
Query: 249 ESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGN 308
+ ++S GT++ LLSG + + N ++ I N + D
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAET-----------NQQIIENI--MNAEYTFDEEAFKE 229
Query: 309 FSSEEATVVFDLASRCLQYEPRERPNTKDL 338
S E D R L E + R +
Sbjct: 230 ISIE----AMDFVDRLLVKERKSRMTASEA 255
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 109 bits (273), Expect = 4e-27
Identities = 47/260 (18%), Positives = 78/260 (30%), Gaps = 28/260 (10%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
V + + +A+K K A +E + K++H + L G
Sbjct: 24 EVILAEDKRTQ---KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG 80
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNA 201
L+ + + L + E R+ + +A+ Y G N
Sbjct: 81 HLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 138
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLAYTPPEYLRNGRVTPESVIFSFGTV 258
DE+ +S FGL K G ST Y PE L + +S G +
Sbjct: 139 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 198
Query: 259 LLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVF 318
LL G PP +D + I + DS + S
Sbjct: 199 AYILLCGY--PPFYDENDAKL---------FEQIL--KAEYEFDSPYWDDISDS----AK 241
Query: 319 DLASRCLQYEPRERPNTKDL 338
D ++ +P +R +
Sbjct: 242 DFIRHLMEKDPEKRFTCEQA 261
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 6e-27
Identities = 48/286 (16%), Positives = 98/286 (34%), Gaps = 44/286 (15%)
Query: 85 VVYKGRLQ--DGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCC- 140
V + D R +AVK + A + + E + + H + C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 141 -DGDERLLVAEYMPNDTLAKHLFHWENQTIE--------------WAMRLRVALYIAEAL 185
G +++ E+ L+ +L N+ + + + +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 186 DYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPE 239
++ +S ++ DL A +L E ++ FGL ++ Y L + PE
Sbjct: 148 EFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 240 YLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILH 299
+ + T +S ++SFG +L ++ S P + ++ +
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRRLKEGTRMR 257
Query: 300 LMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345
D +++ E + C EP +RP +LV L L
Sbjct: 258 APD------YTTPEM---YQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 106 bits (266), Expect = 1e-26
Identities = 53/278 (19%), Positives = 93/278 (33%), Gaps = 38/278 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
V+ R R +AVK DP +F EA L H + +
Sbjct: 22 EVHLARDLR---LHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 78
Query: 142 ----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
G +V EY+ TL + + + V +AL++ G ++
Sbjct: 79 ETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGI-IHR 135
Query: 198 DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNL-------AYTPPEYLRNGRVTPES 250
D+ ++ ++ FG+ + D + T Y PE R V S
Sbjct: 136 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 195
Query: 251 VIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS 310
++S G VL ++L+G+ PP + A +R I S S
Sbjct: 196 DVYSLGCVLYEVLTGE--PPFTGDSPVSV--------AYQHVREDPI---PPSARHEGLS 242
Query: 311 SEEATVVFDLASRCLQYEPRERPNT-KDLVSTLAPLQN 347
++ + + + L P R T ++ + L + N
Sbjct: 243 AD----LDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 2e-26
Identities = 45/277 (16%), Positives = 83/277 (29%), Gaps = 48/277 (17%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
V R + R A+K K E + +L H L D
Sbjct: 23 TVVLARELATS---REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 79
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLN 200
++ Y N L K++ + + I AL+Y + + H DL
Sbjct: 80 DEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG--KGIIHRDLK 135
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFS 254
+L +E+ +++ FG K S+ Y PE L S +++
Sbjct: 136 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWA 195
Query: 255 FGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS---- 310
G ++ L++G PP R N + ++ +
Sbjct: 196 LGCIIYQLVAGL--PP---------------------FRAGNEYLIFQKIIKLEYDFPEK 232
Query: 311 -SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346
+A DL + L + +R +++
Sbjct: 233 FFPKAR---DLVEKLLVLDATKRLGCEEMEGYGPLKA 266
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (261), Expect = 1e-25
Identities = 52/284 (18%), Positives = 101/284 (35%), Gaps = 46/284 (16%)
Query: 85 VVYKGRL----QDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGY 138
V +D + +AVK A D E + + +HK + NL+G
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 139 CCDGDERLLVAEYMPNDTLAKHLFHW--------------ENQTIEWAMRLRVALYIAEA 184
C ++ EY L ++L + + + A +A
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPP 238
++Y +S+ ++ DL A VL E+ +++ FGL ++ Y + + P
Sbjct: 148 MEYLASKK-CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 239 EYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298
E L + T +S ++SFG +L ++ + P + + + + +
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSP----------------YPGVPV---EELF 247
Query: 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
L+ + S ++ + C P +RP K LV L
Sbjct: 248 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 106 bits (265), Expect = 1e-25
Identities = 56/278 (20%), Positives = 85/278 (30%), Gaps = 36/278 (12%)
Query: 67 NNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP------KQFADE 120
N+FS + G VY R D + A+K K
Sbjct: 4 NDFS---VHRIIGRGGFGEVYGCRK---ADTGKMYAMKCLDKKRIKMKQGETLALNERIM 57
Query: 121 AWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALY 180
V + + D+ + + M L HL ++ A A
Sbjct: 58 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAE 115
Query: 181 IAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--LAYTPP 238
I L++ + +Y DL +L DE+G R+S GL + K +++ Y P
Sbjct: 116 IILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 174
Query: 239 EYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297
E L+ G + FS G +L LL G H D +
Sbjct: 175 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--------------DKHEIDRM 220
Query: 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNT 335
M L +FS E + L LQ + R
Sbjct: 221 TLTMAVELPDSFSPE----LRSLLEGLLQRDVNRRLGC 254
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 104 bits (260), Expect = 2e-25
Identities = 60/319 (18%), Positives = 107/319 (33%), Gaps = 44/319 (13%)
Query: 71 SDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---FADEAWGVGK 126
DF I+ G + V+ R + N R+ A+K K KQ DE +
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRH---NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 60
Query: 127 LRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALD 186
+ H + + G D + ++ +Y+ L ++Q + A + AL+
Sbjct: 61 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALE 118
Query: 187 YCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGR 245
Y S+ +Y DL +L D+NG +++ FG K D + Y PE +
Sbjct: 119 YLHSKDI-IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP 177
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305
+SFG ++ ++L+G N + + L
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFY-----------------------DSNTMKTYEKIL 214
Query: 306 EGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNRPDVPSYVMLGIP 360
+E+ DL SR + + +R +L + ++N P V +
Sbjct: 215 NAELRFPPFFNEDV---KDLLSRLITRDLSQRLG--NLQNGTEDVKNHPWFKEVVWEKLL 269
Query: 361 RHEEAPPTPQHPLSPMGDA 379
P GD
Sbjct: 270 SRNIETPYEPPIQQGQGDT 288
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (252), Expect = 1e-24
Identities = 43/267 (16%), Positives = 81/267 (30%), Gaps = 36/267 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP------KQFADEAWGVGKLRHKRLANLIGY 138
VV K R + A K K + E + +++H + L
Sbjct: 25 VVKKCREKS---TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEV 81
Query: 139 CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHD 198
+ + +L+ E + L E +++ I + Y S + + D
Sbjct: 82 YENKTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSL-QIAHFD 138
Query: 199 LNAYRVLFDENGDPR----LSCFGLMKNSRDGKSYSTNL---AYTPPEYLRNGRVTPESV 251
L ++ + P+ + FGL G + + PE + + E+
Sbjct: 139 LKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEAD 198
Query: 252 IFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSS 311
++S G + LLSG L + N + N S+
Sbjct: 199 MWSIGVITYILLSGASPFLGDT-----------KQETLANVSAVNY--EFEDEYFSNTSA 245
Query: 312 EEATVVFDLASRCLQYEPRERPNTKDL 338
D R L +P++R +D
Sbjct: 246 L----AKDFIRRLLVKDPKKRMTIQDS 268
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 101 bits (251), Expect = 2e-24
Identities = 52/280 (18%), Positives = 96/280 (34%), Gaps = 22/280 (7%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKR 131
+ + GE VVYK + G A+KK + P E + +L+H
Sbjct: 6 GLEKIGEGTYGVVYKAQNNYG----ETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 132 LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE 191
+ L +LV E++ D L +E L + + YC
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 192 GRPLYHDLNAYRVLFDENGDPRLSCFGLMK----NSRDGKSYSTNLAYTPPEYLRN-GRV 246
L+ DL +L + G+ +++ FGL + R L Y P+ L +
Sbjct: 120 R-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 247 TPESVIFSFGTVLLDLLSGKHIPPSHD--------MVVWNTVPIKFNFGALDMIRGKNIL 298
+ I+S G + ++++G + P + T K ++ +
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238
Query: 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+ + +F DL S+ L+ +P +R K
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (251), Expect = 2e-24
Identities = 46/271 (16%), Positives = 84/271 (30%), Gaps = 23/271 (8%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD-----PKQFADEAWGVGKLRHKRLANLIGYC 139
VYK R ++ N + +A+KK + + E + +L H + L+
Sbjct: 13 TVYKARDKNTN---QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF 69
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199
LV ++M D + + + + L + L+Y L+ DL
Sbjct: 70 GHKSNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDL 126
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT-----PPEYLRNGRVTPESVIFS 254
+L DENG +L+ FGL K+ T+ T P +++
Sbjct: 127 KPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWA 186
Query: 255 FGTVLLDLLSGKHIPPSHD-------MVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307
G +L +LL P + P + + + +
Sbjct: 187 VGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH 246
Query: 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+ S + DL + P R
Sbjct: 247 HIFSAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (252), Expect = 3e-24
Identities = 48/266 (18%), Positives = 87/266 (32%), Gaps = 45/266 (16%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ----FADEAWGVGKLRHKRLANLIGYCC 140
V+ + N ++ A+K K ++ H L ++
Sbjct: 17 KVFLAEFKKTN---QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ 73
Query: 141 DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLN 200
+ V EY+ L H+ + + A I L + S+G +Y DL
Sbjct: 74 TKENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLK 130
Query: 201 AYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA----YTPPEYLRNGRVTPESVIFSFG 256
+L D++G +++ FG+ K + G + + Y PE L + +SFG
Sbjct: 131 LDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFG 190
Query: 257 TVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFS-----S 311
+L ++L G+ G++ L S N
Sbjct: 191 VLLYEMLIGQSPFH-----------------------GQDEEELFHSIRMDNPFYPRWLE 227
Query: 312 EEATVVFDLASRCLQYEPRERPNTKD 337
+EA DL + EP +R +
Sbjct: 228 KEAK---DLLVKLFVREPEKRLGVRG 250
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 99 bits (248), Expect = 1e-23
Identities = 45/274 (16%), Positives = 97/274 (35%), Gaps = 24/274 (8%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD 143
+V N N+ +A+KK + ++ E + + RH+ + +
Sbjct: 23 MVCSAYD---NVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 79
Query: 144 ERLLVAEYMPNDTLAKHLFHW-ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202
+ Y+ + L+ + Q + I L Y S L+ DL
Sbjct: 80 IEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPS 138
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYST-------NLAYTPPEYLRNGRVTPESV-IFS 254
+L + D ++ FGL + + ++ Y PE + N + +S+ I+S
Sbjct: 139 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 198
Query: 255 FGTVLLDLLSGKHIPPSHD-------MVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307
G +L ++LS + I P ++ P + + + ++ +N L + +
Sbjct: 199 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 258
Query: 308 NFSSEEATV---VFDLASRCLQYEPRERPNTKDL 338
++ DL + L + P +R +
Sbjct: 259 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.8 bits (245), Expect = 1e-23
Identities = 44/283 (15%), Positives = 91/283 (32%), Gaps = 21/283 (7%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP-----KQFADEAWGVGKLR 128
V+E GE A V+K R D + R++A+K+ + + +
Sbjct: 11 CVAEIGEGAYGKVFKAR--DLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 68
Query: 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLA----KHLFHWENQTIEWAMRLRVALYIAEA 184
H + L C + + + +L + + +
Sbjct: 69 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 128
Query: 185 LDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYL 241
LD+ S ++ DL +L +G +L+ FGL + + ++ L Y PE L
Sbjct: 129 LDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 187
Query: 242 RNGRVTPESVIFSFGTVLLDLLSGKHIPPSHD------MVVWNTVPIKFNFGALDMIRGK 295
++S G + ++ K + ++ D+ +
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247
Query: 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
H + F ++ + DL +CL + P +R +
Sbjct: 248 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 98.2 bits (244), Expect = 1e-23
Identities = 50/290 (17%), Positives = 92/290 (31%), Gaps = 43/290 (14%)
Query: 69 FSSDF-IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---------KQFA 118
F ++ G +VV + + + AVK +
Sbjct: 1 FYENYEPKEILGRGVSSVVRRCIHKP---TCKEYAVKIIDVTGGGSFSAEEVQELREATL 57
Query: 119 DEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRV 177
E + K+ H + L LV + M L +L E T+ ++
Sbjct: 58 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKI 115
Query: 178 ALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST---NLA 234
+ E + ++ DL +L D++ + +L+ FG G+ +
Sbjct: 116 MRALLEVICALHKLNI-VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 174
Query: 235 YTPPEYLRNGRV------TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGA 288
Y PE + E ++S G ++ LL+G ++
Sbjct: 175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM----------- 223
Query: 289 LDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
L MI N S ++S V DL SR L +P++R ++
Sbjct: 224 LRMIMSGNYQ--FGSPEWDDYSDT----VKDLVSRFLVVQPQKRYTAEEA 267
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.2 bits (241), Expect = 4e-23
Identities = 53/281 (18%), Positives = 91/281 (32%), Gaps = 22/281 (7%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKR 131
V + GE VVYK R +A+KK + P E + +L H
Sbjct: 6 KVEKIGEGTYGVVYKARN---KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 132 LANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE 191
+ L+ ++ LV E++ D L K + I + + + L +C S
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 192 GRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA-----YTPPEYLRNGR 245
+ H DL +L + G +L+ FGL + T+ P L
Sbjct: 121 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHDMV--------VWNTVPIKFNFGALDMIRGKNI 297
+ I+S G + ++++ + + P + T G M K
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
L S+ L Y+P +R + K
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.7 bits (240), Expect = 5e-23
Identities = 50/266 (18%), Positives = 90/266 (33%), Gaps = 44/266 (16%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP------KQFADEAWGVGKLR--HKRLANLI 136
VY G N +A+K K D + E + K+ + L+
Sbjct: 19 SVYSGIRVSDN---LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 75
Query: 137 GYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
+ D +L+ E E ++ + + EA+ +C + G L+
Sbjct: 76 DWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LH 133
Query: 197 HDLNAYRVLFDEN-GDPRLSCFGLMKNSRDG--KSYSTNLAYTPPEYLRNGRVTPESV-I 252
D+ +L D N G+ +L FG +D + Y+PPE++R R S +
Sbjct: 134 RDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV 193
Query: 253 FSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSE 312
+S G +L D++ G + ++ V + S
Sbjct: 194 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV------------------------SS 229
Query: 313 EATVVFDLASRCLQYEPRERPNTKDL 338
E L CL P +RP +++
Sbjct: 230 ECQ---HLIRWCLALRPSDRPTFEEI 252
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.2 bits (241), Expect = 1e-22
Identities = 56/283 (19%), Positives = 91/283 (32%), Gaps = 46/283 (16%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
VVY+ +L D+ +A+KK + D + E + KL H + L + E
Sbjct: 35 VVYQAKL---CDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 145 R------LLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGRPLYH 197
+ LV +Y+P + QT+ + +L Y S G + H
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICH 145
Query: 198 -DLNAYRVLFDENG-DPRLSCFGLMKNSRDGKSYSTNLAYT----PPEYLRNGRVTPESV 251
D+ +L D + +L FG K G+ + + P T
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 205
Query: 252 IFSFGTVLLDLLSGKHIPPSHDMV----------------VWNTVPIKFNFGALDMIRGK 295
++S G VL +LL G+ I P V + + I+
Sbjct: 206 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 265
Query: 296 NILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+ EA L SR L+Y P R +
Sbjct: 266 PWTKVFRPRT-----PPEA---IALCSRLLEYTPTARLTPLEA 300
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.3 bits (236), Expect = 4e-22
Identities = 54/296 (18%), Positives = 108/296 (36%), Gaps = 35/296 (11%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKH--AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V DG + +A+KK + + K+ E + +RH+ + L+
Sbjct: 33 AVCSAV--DGRTGAK-VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD 89
Query: 143 D------ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY 196
+ + LV +M D +++ + + + + L Y + G +
Sbjct: 90 ETLDDFTDFYLVMPFMGTD----LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII-H 144
Query: 197 HDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNG-RVTPESVIFS 254
DL + +E+ + ++ FGL + + Y Y PE + N R T I+S
Sbjct: 145 RDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWS 204
Query: 255 FGTVLLDLLSGKHIPPSHD--------MVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306
G ++ ++++GK + D M V T P +F L KN + + +
Sbjct: 205 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF-VQRLQSDEAKNYMKGLPELEK 263
Query: 307 GNFSSEEATV---VFDLASRCLQYEPRERPNTKDL-----VSTLAPLQNRPDVPSY 354
+F+S +L + L + +R + +L ++ P V Y
Sbjct: 264 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKY 319
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.4 bits (234), Expect = 9e-22
Identities = 43/265 (16%), Positives = 82/265 (30%), Gaps = 33/265 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD-- 141
V + + + A+K + E + + + ++ +
Sbjct: 27 KVLQIFNKR---TQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLY 78
Query: 142 --GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199
L+V E + L + +Q + I EA+ Y S + D+
Sbjct: 79 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA-HRDV 137
Query: 200 NAYRVLFD---ENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYLRNGRVTPESVIF 253
+L+ N +L+ FG K + S +T Y PE L + ++
Sbjct: 138 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 197
Query: 254 SFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEE 313
S G ++ LL G S+ + + M + + E + SEE
Sbjct: 198 SLGVIMYILLCGYPPFYSNHGLAISP----------GMKTRIRMGQYEFPNPEWSEVSEE 247
Query: 314 ATVVFDLASRCLQYEPRERPNTKDL 338
L L+ EP +R +
Sbjct: 248 V---KMLIRNLLKTEPTQRMTITEF 269
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.0 bits (230), Expect = 2e-21
Identities = 57/289 (19%), Positives = 100/289 (34%), Gaps = 46/289 (15%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V+K R + + +A+KK + P E + L+H+ + NLI C
Sbjct: 25 EVFKARHRK---TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 81
Query: 143 DER--------LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP 194
LV ++ +D T+ RV + L Y
Sbjct: 82 ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLNGLYYIHRNKI- 138
Query: 195 LYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN--------LAYTPPEYLRNGR- 245
L+ D+ A VL +G +L+ FGL + K+ N L Y PPE L R
Sbjct: 139 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERD 198
Query: 246 VTPESVIFSFGTVLLDLLSGKHIPPSHDMV----------------VWNTVPIKFNFGAL 289
P ++ G ++ ++ + I + VW V + L
Sbjct: 199 YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL 258
Query: 290 DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
++++G+ + L+ A DL + L +P +R ++ D
Sbjct: 259 ELVKGQK--RKVKDRLKAYVRDPYA---LDLIDKLLVLDPAQRIDSDDA 302
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 91.8 bits (227), Expect = 4e-21
Identities = 41/273 (15%), Positives = 79/273 (28%), Gaps = 36/273 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC-DGD 143
+Y G +A+K Q E+ ++ I +C +GD
Sbjct: 22 DIYLGTDIA---AGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGD 76
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
++V E + LF++ ++ L +A + ++Y S+ ++ D+
Sbjct: 77 YNVMVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDN 133
Query: 204 VLFDENGDPRL---SCFGLMKNSRDGKSYSTN-----------LAYTPPEYLRNGRVTPE 249
L L FGL K RD +++ Y +
Sbjct: 134 FLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR 193
Query: 250 SVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNF 309
+ S G VL+ G + T K+ + + L +
Sbjct: 194 DDLESLGYVLMYFNLGS---LPWQGLKAATKRQKY------ERISEKKMSTPIEVLCKGY 244
Query: 310 SSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342
SE + C ++P+ L
Sbjct: 245 PSE----FATYLNFCRSLRFDDKPDYSYLRQLF 273
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.2 bits (225), Expect = 4e-21
Identities = 45/270 (16%), Positives = 90/270 (33%), Gaps = 22/270 (8%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG 142
V+K + + +A+K+ + P E + +L+HK + L
Sbjct: 17 TVFKAKN---RETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD 73
Query: 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAY 202
+ LV E+ D F N ++ + + + L +C S L+ DL
Sbjct: 74 KKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQ 130
Query: 203 RVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT-----PPEYLRNGRVTPESVIFSFGT 257
+L + NG+ +L+ FGL + + T P + ++S G
Sbjct: 131 NLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGC 190
Query: 258 VLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVV 317
+ +L + + V I G + ++ L D + + + V
Sbjct: 191 IFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVN 250
Query: 318 F---------DLASRCLQYEPRERPNTKDL 338
DL L+ P +R + ++
Sbjct: 251 VVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 87.6 bits (216), Expect = 9e-20
Identities = 37/281 (13%), Positives = 73/281 (25%), Gaps = 38/281 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR-LANLIGYCCDGD 143
V+++G N + +A+K + + D Q DE L + N+ + +G
Sbjct: 20 VIFEGTNLL---NNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL 74
Query: 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYR 203
+LV + + L + A + + + +Y D+
Sbjct: 75 HNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDN 131
Query: 204 VLFDE-----NGDPRLSCFGLMKNSRDGKSYSTN-----------LAYTPPEYLRNGRVT 247
L + FG++K RD + Y +
Sbjct: 132 FLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQS 191
Query: 248 PESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307
+ + G V + L G + + K L + L
Sbjct: 192 RRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER-------IGEKKQSTPLRE--LCA 242
Query: 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348
F E + P+ L + + R
Sbjct: 243 GFPEE----FYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.5 bits (216), Expect = 2e-19
Identities = 50/259 (19%), Positives = 82/259 (31%), Gaps = 34/259 (13%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCD 141
V R + R+ A+K K E+ + RH L L
Sbjct: 20 KVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT 76
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
D V EY L HL T E A I AL+Y S +Y D+
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSRD-VVYRDIKL 133
Query: 202 YRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLA----YTPPEYLRNGRVTPESVIFSFGT 257
++ D++G +++ FGL K + Y PE L + + G
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 258 VLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVV 317
V+ +++ G+ + D ++I + I S E
Sbjct: 194 VMYEMMCGRLPFYNQDHERL-----------FELILMEEI------RFPRTLSPE----A 232
Query: 318 FDLASRCLQYEPRERPNTK 336
L + L+ +P++R
Sbjct: 233 KSLLAGLLKKDPKQRLGGG 251
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 80.2 bits (197), Expect = 5e-17
Identities = 47/269 (17%), Positives = 88/269 (32%), Gaps = 33/269 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ---FADEAWGVGKLRHKRLANLIGYCCD 141
V + ++ + A+K K KQ +E + + L L D
Sbjct: 56 RVMLVKHKE---SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 142 GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
+V EY+ + HL A I +Y S +Y DL
Sbjct: 113 NSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDL-IYRDLKP 169
Query: 202 YRVLFDENGDPRLSCFGLMKNSRD-GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLL 260
+L D+ G +++ FG K + + PE + + ++ G ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIY 229
Query: 261 DLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDL 320
++ +G PP F A I+ + +FSS+ + DL
Sbjct: 230 EMAAGY--PP---------------FFADQPIQIYEKIVSGKVRFPSHFSSD----LKDL 268
Query: 321 ASRCLQYEPRERPNTKDLVSTLAPLQNRP 349
LQ + +R +L + + ++N
Sbjct: 269 LRNLLQVDLTKRF--GNLKNGVNDIKNHK 295
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.4 bits (192), Expect = 2e-16
Identities = 43/281 (15%), Positives = 88/281 (31%), Gaps = 20/281 (7%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH--AWPDPKQFADEAWGVGKLRHKR 131
+S G A V +AVKK ++ + K+ E + ++H+
Sbjct: 22 NLSPVGSGAYGSVCAAFD---TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 132 LANLIGYCCDGDERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYCS 189
+ L+ + L + + Q + + I L Y
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 190 SEGRPLYHDLNAYRVLFDENGDPRLSCFGL--MKNSRDGKSYSTNLAYTPPEYLRNGRVT 247
S + DL + +E+ + ++ FGL + +T P L
Sbjct: 139 SADII-HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 248 PESVIFSFGTVLLDLLSGKHIPPSHD-------MVVWNTVPIKFNFGALDMIRGKNILHL 300
I+S G ++ +LL+G+ + P D ++ P + +N +
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 301 MDSHLEGNFSSEEATV---VFDLASRCLQYEPRERPNTKDL 338
+ + NF++ DL + L + +R
Sbjct: 258 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 78.0 bits (191), Expect = 2e-16
Identities = 49/282 (17%), Positives = 89/282 (31%), Gaps = 43/282 (15%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGD 143
V++ N + VK K+ E + LR + L D
Sbjct: 50 EVFEAINITNN---EKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV 103
Query: 144 ERL--LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNA 201
R LV E++ N + QT+ I +ALDYC S G + D+
Sbjct: 104 SRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIM-HRDVKP 157
Query: 202 YRVLFD-ENGDPRLSCFGLMKNSRDGKSYS----TNLAYTPPEYLRNGRVTPESVIFSFG 256
+ V+ D E+ RL +GL + G+ Y+ + P + ++S G
Sbjct: 158 HNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG 217
Query: 257 TVLLDLLSGKH--------------------IPPSHDMVVWNTVPIKFNFGALDMIRGKN 296
+L ++ K +D + + + F + +
Sbjct: 218 CMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK 277
Query: 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
+ S EA D + L+Y+ + R ++
Sbjct: 278 RWERFVHSENQHLVSPEA---LDFLDKLLRYDHQSRLTAREA 316
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (187), Expect = 7e-16
Identities = 52/261 (19%), Positives = 87/261 (33%), Gaps = 32/261 (12%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPD----PKQFADEAWGVGKLRHKR-LANLIGYC 139
V+ R G+D + A+K K + E + +R L L
Sbjct: 39 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 98
Query: 140 CDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDL 199
+ L+ +Y+ L HL E T I AL++ G +Y D+
Sbjct: 99 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQ--IYVGEIVLALEHLHKLG-IIYRDI 155
Query: 200 NAYRVLFDENGDPRLSCFGLMKNSRDGKSYST-----NLAYTPPEYLRNGR--VTPESVI 252
+L D NG L+ FGL K ++ + Y P+ +R G
Sbjct: 156 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDW 215
Query: 253 FSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSE 312
+S G ++ +LL+G P F + + E + E
Sbjct: 216 WSLGVLMYELLTGA--SP---------------FTVDGEKNSQAEISRRILKSEPPYPQE 258
Query: 313 EATVVFDLASRCLQYEPRERP 333
+ + DL R L +P++R
Sbjct: 259 MSALAKDLIQRLLMKDPKKRL 279
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 76.6 bits (187), Expect = 9e-16
Identities = 46/302 (15%), Positives = 90/302 (29%), Gaps = 52/302 (17%)
Query: 85 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDE 144
V+ + N +A+K + DE + ++ +
Sbjct: 28 TVWLAKDMVNN---THVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL 83
Query: 145 RLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSS 190
+LL + +E ++ I +++ + LDY
Sbjct: 84 KLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR 143
Query: 191 EGRPLYHDLNAYRVLFDENGDP------RLSCFGLMKNSRDGKSYS-TNLAYTPPEYLRN 243
++ D+ VL + P +++ G + + S Y PE L
Sbjct: 144 RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG 203
Query: 244 GRVTPESVIFSFGTVLLDLLSGKHI-------------------------PPSHDMVVWN 278
+ I+S ++ +L++G + PS+ +
Sbjct: 204 APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 263
Query: 279 TVPIKFNFGALDMIRGKNILHLMDSHLEGN--FSSEEATVVFDLASRCLQYEPRERPNTK 336
FN L K ++ L FS +EA + D S LQ +PR+R +
Sbjct: 264 YTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 323
Query: 337 DL 338
L
Sbjct: 324 GL 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.1 bits (178), Expect = 1e-14
Identities = 39/297 (13%), Positives = 87/297 (29%), Gaps = 41/297 (13%)
Query: 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKR 131
+ G A +V R +A+KK ++ K+ E + + HK
Sbjct: 21 NLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 132 LANLIGYCC------DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEAL 185
+ +L+ + + LV E M + + + + +
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGI 132
Query: 186 DYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN---LAYTPPEYLR 242
+ S ++ DL ++ + ++ FGL + + + Y PE +
Sbjct: 133 KHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 243 NGRVTPESVIFSFGTVLLDLLSGKH---------------------IPPSHDMVVWNTVP 281
I+S G ++ +++ K P +
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 282 IKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDL 338
N + + + + +A+ DL S+ L +P +R + D
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.9 bits (123), Expect = 3e-08
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
E +++G+ F +++ A CY + I + Y R+LC+L QP+ AL D +A
Sbjct: 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRA 64
Query: 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
+ A + +++ + +A L+ A SL
Sbjct: 65 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 117 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (89), Expect = 2e-04
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479
E +++G+ A A+ CYS+ I + RS + A D +
Sbjct: 5 ELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYS-NRSAAYAKKGDYQKAYEDGCKT 63
Query: 480 QCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLE 517
+ PDW + +A AL L+ ++A +E E
Sbjct: 64 VDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 101
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 527 | |||
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.91 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.82 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.78 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.78 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.73 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.72 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.71 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.7 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.67 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.64 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.64 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.62 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.6 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.55 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.55 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.53 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.52 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.5 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.48 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.41 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.39 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.39 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.34 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.24 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.23 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.23 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.19 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.18 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.17 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.17 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.16 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.14 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.13 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.12 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.11 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.02 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.0 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.96 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.87 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.86 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.76 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.74 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.69 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.63 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.61 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.5 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.47 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.42 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.42 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.4 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.24 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.18 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.17 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.12 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.1 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.01 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.91 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.89 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.77 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.56 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.12 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.83 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.41 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 82.84 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 81.27 |
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-57 Score=435.92 Aligned_cols=249 Identities=16% Similarity=0.245 Sum_probs=212.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.++++||+|+||+||+|++.. +|+.||||+++.......+.+.+|+.+|++++|||||++++++.+.+.+|||||
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE 97 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVA---TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTT---TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEecCcCcEEEEEEECC---CCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEE
Confidence 46688899999999999999987 889999999987766667889999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC----
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG---- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~---- 226 (527)
||+||+|.+++.+ ..+++..++.|+.||+.||.|||+++ ||||||||+|||++.++++||+|||+++.....
T Consensus 98 y~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~ 173 (293)
T d1yhwa1 98 YLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (293)
T ss_dssp CCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred ecCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeeccccccc
Confidence 9999999998853 46999999999999999999999999 999999999999999999999999999875432
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.+.... ...... .....
T Consensus 174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----------~~~~~~--------~~~~~ 235 (293)
T d1yhwa1 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----------LYLIAT--------NGTPE 235 (293)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------HHHHHH--------HCSCC
T ss_pred cccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHH----------HHHHHh--------CCCCC
Confidence 345789999999999999999999999999999999999999975431110 000000 01111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...+...+..+.+||.+||+.||.+|||+.|+++|-+.
T Consensus 236 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~ 273 (293)
T d1yhwa1 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273 (293)
T ss_dssp CSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGG
T ss_pred CCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhh
Confidence 22344556789999999999999999999999988543
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.7e-58 Score=442.04 Aligned_cols=271 Identities=20% Similarity=0.294 Sum_probs=212.5
Q ss_pred ccCHHHHHHHhcCCCc------ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCC
Q 009750 56 EFSLADLRAATNNFSS------DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLR 128 (527)
Q Consensus 56 ~~~~~~~~~~~~~~~~------~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~ 128 (527)
.++++++..++.+|+. +.+.+.||+|+||+||+|.++..+.....||||++...... ..++|.+|+.+|++++
T Consensus 6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~ 85 (299)
T d1jpaa_ 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 85 (299)
T ss_dssp GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC
Confidence 3556677777776653 34456799999999999999764334457999998765432 2457999999999999
Q ss_pred CCccceeEEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC
Q 009750 129 HKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE 208 (527)
Q Consensus 129 H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~ 208 (527)
|||||+++|+|.+.+.++||||||++|+|.+++.. ..+.+++.+++.|+.||++||.|||+++ ||||||||+||||+.
T Consensus 86 HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~~ 163 (299)
T d1jpaa_ 86 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNS 163 (299)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECT
T ss_pred CCCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEECC
Confidence 99999999999999999999999999999998864 4557999999999999999999999999 999999999999999
Q ss_pred CCCceeecccCccccCCCC---------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccc
Q 009750 209 NGDPRLSCFGLMKNSRDGK---------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWN 278 (527)
Q Consensus 209 ~~~~kl~DFG~a~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~ 278 (527)
++++||+|||+++...... ...+|+.|||||++.++.++.++|||||||+||||+| |+.||.+....
T Consensus 164 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--- 240 (299)
T d1jpaa_ 164 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--- 240 (299)
T ss_dssp TCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---
T ss_pred CCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH---
Confidence 9999999999998654321 1346889999999999999999999999999999998 89898654211
Q ss_pred cccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 279 TVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
.+...+....+.+.+..++..+.+|+.+||+.||.+|||+.+|++.|+.+...
T Consensus 241 -----------------~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 241 -----------------DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293 (299)
T ss_dssp -----------------HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -----------------HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence 11111222233344556677899999999999999999999999999887543
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.7e-57 Score=435.11 Aligned_cols=254 Identities=20% Similarity=0.324 Sum_probs=216.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
++.+++.||+|+||+||+|++.. +++.||||+++... ...++|.+|+.+|++++|||||+++|+|.+++.++||||
T Consensus 18 ~~~~~~~iG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E 93 (287)
T d1opja_ 18 DITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 93 (287)
T ss_dssp GEEEEEETTTTTTSSEEEEEEGG---GTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HeEEeeEEeeCCCeEEEEEEECC---CCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEee
Confidence 45577889999999999999987 78999999997654 456789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
||++|+|.+++.......+++..++.|+.||+.||.|||+++ ||||||||+||||++++++||+|||+++......
T Consensus 94 ~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~ 172 (287)
T d1opja_ 94 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 172 (287)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEE
T ss_pred cccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCcee
Confidence 999999999998666778999999999999999999999999 9999999999999999999999999998765432
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
...+|+.|+|||++.+..++.++|||||||++|||++|..||...... ..+..++....
T Consensus 173 ~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~-------------------~~~~~~i~~~~ 233 (287)
T d1opja_ 173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-------------------SQVYELLEKDY 233 (287)
T ss_dssp ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------------------HHHHHHHHTTC
T ss_pred eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH-------------------HHHHHHHhcCC
Confidence 234688999999999999999999999999999999987765432111 11112222333
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
....+..+++.+.+||.+||+.||++|||+.++++.|+.+...
T Consensus 234 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 234 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 4445556677899999999999999999999999999887543
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-57 Score=432.00 Aligned_cols=249 Identities=19% Similarity=0.159 Sum_probs=205.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
++.+++.||+|+||+||+|+++. +|+.||||+++.... ...+.+.+|+.+|++++|||||++++++.+.+..||||
T Consensus 6 dy~~~~~lG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivm 82 (271)
T d1nvra_ 6 DWDLVQTLGEGAYGEVQLAVNRV---TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 82 (271)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEE
Confidence 45678899999999999999987 889999999976543 23467999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD---- 225 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~---- 225 (527)
|||++|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+|+....
T Consensus 83 Ey~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~ 159 (271)
T d1nvra_ 83 EYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159 (271)
T ss_dssp ECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred eccCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCcc
Confidence 9999999999996 5568999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 226 --GKSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 226 --~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....+||+.|||||++.+..+ +.++|||||||+||||+||+.||........ ..... ..
T Consensus 160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~----------~~~~~--------~~ 221 (271)
T d1nvra_ 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ----------EYSDW--------KE 221 (271)
T ss_dssp CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH----------HHHHH--------HT
T ss_pred ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH----------HHHHH--------hc
Confidence 234579999999999988776 6789999999999999999999965432211 00000 01
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...........++.+.+|+.+||+.||++|||++++++|-+
T Consensus 222 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpw 262 (271)
T d1nvra_ 222 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 262 (271)
T ss_dssp TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred CCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHh
Confidence 11111112334567889999999999999999999998754
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-57 Score=427.97 Aligned_cols=246 Identities=22% Similarity=0.293 Sum_probs=210.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC---CCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH---AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
++.+++.||+|+||+||+|+++. +++.||||++.+. .....+.+.+|+.+|++++|||||++++++.+.+.++|
T Consensus 7 dy~i~~~iG~G~fg~Vy~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i 83 (263)
T d2j4za1 7 DFEIGRPLGKGKFGNVYLAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 83 (263)
T ss_dssp GEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HeEEEEEEecCCCcEEEEEEECC---CCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEE
Confidence 46688899999999999999987 8899999998743 23345789999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
|||||++|+|.+++. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 84 vmEy~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~ 160 (263)
T d2j4za1 84 ILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 160 (263)
T ss_dssp EEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC
T ss_pred EEeecCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCc
Confidence 999999999999997 3457999999999999999999999999 999999999999999999999999999876544
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....||+.|||||++.+..++.++|||||||+||||+||+.||.+.+... ... .+.. .
T Consensus 161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-----------~~~--------~i~~--~ 219 (263)
T d2j4za1 161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----------TYK--------RISR--V 219 (263)
T ss_dssp CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------HHH--------HHHT--T
T ss_pred ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH-----------HHH--------HHHc--C
Confidence 34578999999999999999999999999999999999999997543111 011 1111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
...+|...++.+.+|+.+||+.||++|||+.++++|-+
T Consensus 220 ~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~ 257 (263)
T d2j4za1 220 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 257 (263)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcC
Confidence 12244456678999999999999999999999998754
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-56 Score=426.32 Aligned_cols=251 Identities=24% Similarity=0.334 Sum_probs=202.0
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+++.+++.||+|+||+||+|++. +++.||||+++... ...++|.+|++++++++|||||+++|+|...+..+|||
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~ 79 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 79 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET----TTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC----CCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEE
Confidence 34567889999999999999987 56779999997644 45678999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++|+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 80 E~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 157 (263)
T d1sm2a_ 80 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157 (263)
T ss_dssp ECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred EecCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCce
Confidence 99999999999864 4467899999999999999999999999 999999999999999999999999999865433
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....||+.|+|||++.+..++.++|||||||++|||+|+..|+...... ..+...+...
T Consensus 158 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~-------------------~~~~~~i~~~ 218 (263)
T d1sm2a_ 158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------------------SEVVEDISTG 218 (263)
T ss_dssp -------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH-------------------HHHHHHHHHT
T ss_pred eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH-------------------HHHHHHHHhc
Confidence 2346789999999999999999999999999999999965444322110 0011111122
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.+...|..+++.+.+|+.+||+.||++|||+++++++|+.+.
T Consensus 219 ~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~ 260 (263)
T d1sm2a_ 219 FRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 260 (263)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 223344555678999999999999999999999999999875
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-56 Score=430.65 Aligned_cols=248 Identities=17% Similarity=0.212 Sum_probs=209.6
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEe
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEY 151 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~ 151 (527)
+.+++.||+|+||+||+|++.. +++.||||+++.......+.+.+|+++|++++|||||++++++.+.+.++|||||
T Consensus 14 Y~i~~~iG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy 90 (288)
T d2jfla1 14 WEIIGELGDGAFGKVYKAQNKE---TSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 90 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEeEEEeeCCCcEEEEEEECC---CCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence 4678899999999999999987 8899999999876655667899999999999999999999999999999999999
Q ss_pred cCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC----CC
Q 009750 152 MPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD----GK 227 (527)
Q Consensus 152 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~----~~ 227 (527)
|++|+|.+++.. ....+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.... ..
T Consensus 91 ~~~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~ 168 (288)
T d2jfla1 91 CAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 168 (288)
T ss_dssp CTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHT
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCccccc
Confidence 999999999864 3457999999999999999999999999 99999999999999999999999999976433 23
Q ss_pred ccccCCccCCccccc-----CCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 228 SYSTNLAYTPPEYLR-----NGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
+..||+.|+|||++. +..|+.++|||||||++|||+||+.||.+.+... .. ..+..
T Consensus 169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~-----------~~--------~~i~~ 229 (288)
T d2jfla1 169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR-----------VL--------LKIAK 229 (288)
T ss_dssp CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-----------HH--------HHHHH
T ss_pred ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH-----------HH--------HHHHc
Confidence 567999999999984 4558999999999999999999999996543211 01 11111
Q ss_pred cc-cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 303 SH-LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 303 ~~-~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.. .....+...++.+.+||.+||+.||.+|||+.|+++|-+
T Consensus 230 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~ 271 (288)
T d2jfla1 230 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 271 (288)
T ss_dssp SCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred CCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence 10 111233456678999999999999999999999998754
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.9e-56 Score=432.84 Aligned_cols=248 Identities=20% Similarity=0.209 Sum_probs=209.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
+.++++||+|+||+||+|++.. +++.||||+++.....+ .+.+.+|+.+|++++|||||++++++.+.+..+||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 93 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVR---NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEeeEEEecCCCeEEEEEEECC---CCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence 4578899999999999999987 88999999998665433 24689999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCCc
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKS 228 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 228 (527)
||||++|+|..++. ....+++..++.|+.||+.||.|||+++ ||||||||+||||+.++++||+|||+++.......
T Consensus 94 ~E~~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~ 170 (309)
T d1u5ra_ 94 MEYCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 170 (309)
T ss_dssp EECCSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred EEecCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCc
Confidence 99999999987765 4567999999999999999999999999 99999999999999999999999999998888788
Q ss_pred cccCCccCCcccccC---CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 229 YSTNLAYTPPEYLRN---GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~---~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
..||+.|||||++.+ ..|+.++|||||||++|||++|+.||.+..... . +..+.....
T Consensus 171 ~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~-----------~--------~~~i~~~~~ 231 (309)
T d1u5ra_ 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----------A--------LYHIAQNES 231 (309)
T ss_dssp CCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----------H--------HHHHHHSCC
T ss_pred cccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH-----------H--------HHHHHhCCC
Confidence 899999999999864 458999999999999999999999986542110 0 111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....+...++.+.+||.+||+.||.+|||+.++++|-+-
T Consensus 232 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~ 270 (309)
T d1u5ra_ 232 PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (309)
T ss_dssp CCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHh
Confidence 111223346679999999999999999999999988554
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-56 Score=426.27 Aligned_cols=249 Identities=18% Similarity=0.221 Sum_probs=197.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEe--CCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCD--GDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~ 146 (527)
++.+++.||+|+||+||+|+++. +|+.||||++....... .+.+.+|+++|++++|||||++++++.+ .+.+|
T Consensus 5 dy~~~~~iG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 5 DYEVLYTIGTGSYGRCQKIRRKS---DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEE
T ss_pred hCEEeEEEecCCCeEEEEEEECC---CCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEE
Confidence 46688999999999999999987 88999999998765332 3568999999999999999999999965 45689
Q ss_pred EEEEecCCCCHhHHhhhc--CCCCcCHHHHHHHHHHHHHHHHHhhhCC----CccccccCCCceEeCCCCCceeecccCc
Q 009750 147 LVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEG----RPLYHDLNAYRVLFDENGDPRLSCFGLM 220 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~i~~aL~~lH~~~----~ivH~Dlkp~NIll~~~~~~kl~DFG~a 220 (527)
||||||++|+|.+++... ....+++..++.++.||+.||.|||+.+ +||||||||+|||++.++.+||+|||++
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a 161 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 161 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence 999999999999998642 3567999999999999999999999864 4999999999999999999999999999
Q ss_pred cccCCC----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 221 KNSRDG----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 221 ~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
+..... ....||+.|||||++.+..++.++|||||||++|||+||+.||.+.+... ....
T Consensus 162 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~-----------~~~~----- 225 (269)
T d2java1 162 RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-----------LAGK----- 225 (269)
T ss_dssp HHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----------HHHH-----
T ss_pred eecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH-----------HHHH-----
Confidence 875543 34678999999999999999999999999999999999999997543110 1111
Q ss_pred chhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
+... .....+...++.+.+||.+||+.||.+|||+.++++|-
T Consensus 226 ---i~~~-~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp 267 (269)
T d2java1 226 ---IREG-KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 267 (269)
T ss_dssp ---HHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred ---HHcC-CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCC
Confidence 1111 11123445567799999999999999999999999863
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-56 Score=424.04 Aligned_cols=254 Identities=20% Similarity=0.289 Sum_probs=202.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
+.+.+++.||+|+||+||+|+... .||||+++..... ..+.|.+|+.+|++++|||||+++|++.+ +.++|
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~~------~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~l 80 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWHG------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAI 80 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESSS------EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred ccEEEEEEEeeCCCcEEEEEEECC------EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEE
Confidence 445677889999999999998652 3999999765432 34679999999999999999999998754 56899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
|||||++|+|.+++.. ....+++..++.|+.||++||.|||+++ ||||||||+||||+.++.+||+|||+|+.....
T Consensus 81 v~Ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~ 158 (276)
T d1uwha_ 81 VTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 158 (276)
T ss_dssp EEECCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC-----
T ss_pred EEecCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccC
Confidence 9999999999999964 4467999999999999999999999999 999999999999999999999999999765432
Q ss_pred -----CccccCCccCCcccccCC---cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 227 -----KSYSTNLAYTPPEYLRNG---RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~---~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
.+..||+.|||||++.+. .++.++|||||||+||||+||+.||.+.+.... ...........
T Consensus 159 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~----------~~~~~~~~~~~ 228 (276)
T d1uwha_ 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ----------IIFMVGRGYLS 228 (276)
T ss_dssp -------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH----------HHHHHHHTSCC
T ss_pred CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH----------HHHHHhcCCCC
Confidence 245789999999999653 478999999999999999999999975432110 11111111000
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+ .....+..+++.+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 229 ----p-~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~ 272 (276)
T d1uwha_ 229 ----P-DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272 (276)
T ss_dssp ----C-CGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----C-cchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 0 0011233455679999999999999999999999999998764
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-56 Score=436.22 Aligned_cols=267 Identities=20% Similarity=0.226 Sum_probs=207.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
++.+++.||+|+||+||+|++.. +|+.||||+++...... .+++.+|+.+|++++|||||+++++|.+...++|||
T Consensus 7 ~y~~~~~iG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm 83 (322)
T d1s9ja_ 7 DFEKISELGAGNGGVVFKVSHKP---SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 83 (322)
T ss_dssp GEEEEEEEECCSSCCEEEEEETT---TTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 35578899999999999999987 88999999997654333 467999999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhC-CCccccccCCCceEeCCCCCceeecccCccccCC--C
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSE-GRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD--G 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~-~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~--~ 226 (527)
||++||+|.+++.+ .+.+++..++.++.||+.||.|||++ + |+||||||+|||++.++++||+|||+|+...+ .
T Consensus 84 Ey~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 160 (322)
T d1s9ja_ 84 EHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160 (322)
T ss_dssp ECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC
T ss_pred EcCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCcc
Confidence 99999999999974 45799999999999999999999974 7 99999999999999999999999999986432 3
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhH------------------
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGA------------------ 288 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~------------------ 288 (527)
.+.+||+.|+|||++.+..|+.++||||||||+|||++|+.||.+.+.............+.
T Consensus 161 ~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (322)
T d1s9ja_ 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY 240 (322)
T ss_dssp ---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------------
T ss_pred ccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccc
Confidence 46789999999999999999999999999999999999999997754321100000000000
Q ss_pred -HHHHhcCcchhhcccc---cCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 289 -LDMIRGKNILHLMDSH---LEGNFS-SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 289 -~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
................ .....+ ...+.++.+|+.+||+.||.+|||++|+++|-+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf 300 (322)
T d1s9ja_ 241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 300 (322)
T ss_dssp -----CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHh
Confidence 0000000000000000 000111 123567899999999999999999999999844
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-56 Score=424.74 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=206.7
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+.+.+++.||+|+||+||+|.++ +++.||||+++... ...+.|.+|+++|++++|||||+++|++.+ +..+|||
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~ 86 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHeEEeEEEecCCCcEEEEEEEC----CCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEE
Confidence 34557888999999999999986 56789999997643 456789999999999999999999998854 5679999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++|+|.+++.......+++..++.|+.||++||.|||+++ |+||||||+||||++++.+||+|||+|+.....
T Consensus 87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~ 165 (272)
T d1qpca_ 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (272)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCccc
Confidence 9999999999886544456999999999999999999999999 999999999999999999999999999876543
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....+|+.|+|||++.++.++.++|||||||+||||+||..|+....... .....+...
T Consensus 166 ~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~-------------------~~~~~i~~~ 226 (272)
T d1qpca_ 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-------------------EVIQNLERG 226 (272)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------------------HHHHHHHTT
T ss_pred cccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH-------------------HHHHHHHhc
Confidence 23467899999999998899999999999999999999766543321110 011111122
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.+...+..+++.+.+|+.+||+.||++|||+++|++.|+.+
T Consensus 227 ~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ 267 (272)
T d1qpca_ 227 YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (272)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence 23334455667799999999999999999999999998864
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-55 Score=414.34 Aligned_cols=247 Identities=23% Similarity=0.333 Sum_probs=209.6
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+..+++.||+|+||+||+|+++ +++.||||++++.. ...++|.+|+.++++++|||||+++|+|.+.+.+++|||
T Consensus 5 ~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~E 79 (258)
T d1k2pa_ 5 DLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 79 (258)
T ss_dssp CCCCCCCCCEETTEEEEEEEET----TTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEE
T ss_pred HCEEeEEEecCCCeEEEEEEEC----CCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Confidence 3457889999999999999986 67889999998654 346789999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+++|+|..++.. ....+++..+++|+.||++||.|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 80 y~~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 157 (258)
T d1k2pa_ 80 YMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 157 (258)
T ss_dssp CCTTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCC
T ss_pred ccCCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCcee
Confidence 9999999999764 4457899999999999999999999999 9999999999999999999999999997654332
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+..... +...+...
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~--------------------~~~~i~~~ 217 (258)
T d1k2pa_ 158 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--------------------TAEHIAQG 217 (258)
T ss_dssp CCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--------------------HHHHHHTT
T ss_pred ecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH--------------------HHHHHHhC
Confidence 3467899999999999999999999999999999998 788886542110 11111122
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.+...|...++.+.+||.+||+.||++|||+++++++|..
T Consensus 218 ~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 218 LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred CCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence 2334455566789999999999999999999999999865
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-55 Score=421.61 Aligned_cols=243 Identities=21% Similarity=0.271 Sum_probs=200.5
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPN 154 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~ 154 (527)
+||+|+||+||+|.+.... +++.||||+++...... .++|.+|+++|++++|||||+++|+|.. +..+|||||+++
T Consensus 14 ~iG~G~fG~Vy~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 14 ELGSGNFGTVKKGYYQMKK-VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEECSSEEEEEEEEECSS-SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CcccCCCeEEEEEEEccCC-cCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 5899999999999876432 57889999997654332 4579999999999999999999999964 567899999999
Q ss_pred CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-------
Q 009750 155 DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK------- 227 (527)
Q Consensus 155 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~------- 227 (527)
|+|.+++. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++......
T Consensus 92 g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 92 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 99999997 4567999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 228 SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 228 ~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
...||+.|+|||++.+..++.++|||||||++|||+| |+.||.+.+.. .+...+....+
T Consensus 169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~--------------------~~~~~i~~~~~ 228 (277)
T d1xbba_ 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------------------EVTAMLEKGER 228 (277)
T ss_dssp --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------------------HHHHHHHTTCC
T ss_pred ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH--------------------HHHHHHHcCCC
Confidence 2357899999999999999999999999999999998 89998754211 11111222223
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
...|..++..+.+||.+||+.||++|||+.+|++.|+.
T Consensus 229 ~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~ 266 (277)
T d1xbba_ 229 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 266 (277)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence 34555667789999999999999999999999888764
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-55 Score=417.83 Aligned_cols=245 Identities=17% Similarity=0.233 Sum_probs=199.0
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEe----CCeeeE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLL 147 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~l 147 (527)
+..+||+|+||+||+|++.. +++.||||++...... ..+.|.+|+++|++++|||||++++++.+ ...++|
T Consensus 13 ~~~~iG~G~fg~Vy~~~~~~---~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i 89 (270)
T d1t4ha_ 13 FDIEIGRGSFKTVYKGLDTE---TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 89 (270)
T ss_dssp EEEEEEECSSEEEEEEEETT---TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eeeEEecCcCcEEEEEEECC---CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence 44578999999999999987 7889999998765432 24579999999999999999999999875 345899
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCC-CccccccCCCceEeC-CCCCceeecccCccccCC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFD-ENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~-~ivH~Dlkp~NIll~-~~~~~kl~DFG~a~~~~~ 225 (527)
||||+++|+|.+++.. ...+++..++.|+.||+.||.|||+++ +||||||||+|||++ +++.+||+|||+++....
T Consensus 90 vmE~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 90 VTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEeCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence 9999999999999973 467999999999999999999999976 499999999999996 578999999999986554
Q ss_pred C--CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 226 G--KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 226 ~--~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
. .+..||+.|||||++.+ .++.++|||||||++|||+||+.||........ ....... .
T Consensus 168 ~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~----------~~~~i~~--------~ 228 (270)
T d1t4ha_ 168 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ----------IYRRVTS--------G 228 (270)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH----------HHHHHTT--------T
T ss_pred CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH----------HHHHHHc--------C
Confidence 3 35689999999999865 699999999999999999999999965421110 0111111 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.....++...++.+.+||.+||+.||++|||+.|+++|-
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp 267 (270)
T d1t4ha_ 229 VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 267 (270)
T ss_dssp CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred CCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCc
Confidence 111112223445688999999999999999999999874
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2e-55 Score=425.66 Aligned_cols=247 Identities=17% Similarity=0.205 Sum_probs=194.1
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+++.||+|+||+||+|+++. +++.||||++.+.... ..+.+.+|+.+|++++|||||++++++.+++.+|||||
T Consensus 11 Y~~~~~lG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 11 YDFRDVLGTGAFSEVILAEDKR---TQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp EEEEEESBSGGGGGEEEEEETT---TCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEeeccCeEEEEEEECC---CCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5678889999999999999987 7899999999765432 34568899999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC---CCCCceeecccCccccCCC-
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD---ENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~---~~~~~kl~DFG~a~~~~~~- 226 (527)
||+||+|.+++. ..+.+++..+..++.||+.||.|||+++ ||||||||+|||++ +++.+||+|||+++.....
T Consensus 88 ~~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~ 164 (307)
T d1a06a_ 88 LVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 164 (307)
T ss_dssp CCCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred ccCCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCC
Confidence 999999999997 4568999999999999999999999999 99999999999994 5789999999999876543
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
.+.+||+.|||||++.+..++.++|||||||+||||+||+.||.+..... .. ..+....
T Consensus 165 ~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~-----------~~--------~~i~~~~ 225 (307)
T d1a06a_ 165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK-----------LF--------EQILKAE 225 (307)
T ss_dssp --------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----------HH--------HHHHTTC
T ss_pred eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHH-----------HH--------HHHhccC
Confidence 35679999999999999999999999999999999999999997543111 00 1111111
Q ss_pred --cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 305 --LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 305 --~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.....+...++.+.+||.+||+.||++|||+.|+++|-+
T Consensus 226 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~ 266 (307)
T d1a06a_ 226 YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 266 (307)
T ss_dssp CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred CCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHh
Confidence 111223445677999999999999999999999999844
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-56 Score=426.17 Aligned_cols=245 Identities=18% Similarity=0.184 Sum_probs=207.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
++.+++.||+|+||+||+|+++. +++.||||++++.. ....+.+.+|+++|++++|||||++++++.+.+.+||
T Consensus 9 dy~i~~~lG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 85 (288)
T d1uu3a_ 9 DFKFGKILGEGSFSTVVLARELA---TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF 85 (288)
T ss_dssp GEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEE
T ss_pred CCEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEE
Confidence 46688899999999999999987 78999999987532 2345689999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
|||||+||+|.+++. ..+.+++..++.++.||+.||.|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 86 vmEy~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~ 162 (288)
T d1uu3a_ 86 GLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162 (288)
T ss_dssp EECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EEEccCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCC
Confidence 999999999999987 4467999999999999999999999999 999999999999999999999999999875432
Q ss_pred -----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 227 -----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 227 -----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
.+..||+.|+|||++.+..++.++|||||||+||||+||+.||.+.+... .. ..+.
T Consensus 163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~-----------~~--------~~i~ 223 (288)
T d1uu3a_ 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-----------IF--------QKII 223 (288)
T ss_dssp -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HH--------HHHH
T ss_pred cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH-----------HH--------HHHH
Confidence 24579999999999999999999999999999999999999997543111 00 1111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTL 342 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L 342 (527)
.. ...++...++.+.+||.+||+.||.+|||++|++.+.
T Consensus 224 ~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~ 262 (288)
T d1uu3a_ 224 KL--EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 262 (288)
T ss_dssp TT--CCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHH
T ss_pred cC--CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCH
Confidence 11 1224445567799999999999999999999976543
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-55 Score=422.75 Aligned_cols=245 Identities=20% Similarity=0.264 Sum_probs=203.2
Q ss_pred cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEEecCCC
Q 009750 77 ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPND 155 (527)
Q Consensus 77 ~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E~~~~g 155 (527)
+||+|+||+||+|.++... ++..||||+++..... ..++|.+|+++|++++|||||+++|+|.. +.++||||||++|
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~-~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g 93 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRK-KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 93 (285)
T ss_dssp EEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred EEecccCeEEEEEEEecCC-CcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCC
Confidence 4899999999999886532 5668999999765432 24679999999999999999999999865 5689999999999
Q ss_pred CHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-------c
Q 009750 156 TLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK-------S 228 (527)
Q Consensus 156 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~-------~ 228 (527)
+|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...... .
T Consensus 94 ~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~ 171 (285)
T d1u59a_ 94 PLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 171 (285)
T ss_dssp EHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred cHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhcccccccccccccc
Confidence 99999853 4567999999999999999999999999 9999999999999999999999999998654432 3
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
..+|+.|+|||++.++.++.++|||||||++|||+| |+.||.+.+.. .+...+....+.
T Consensus 172 ~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--------------------~~~~~i~~~~~~ 231 (285)
T d1u59a_ 172 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------------------EVMAFIEQGKRM 231 (285)
T ss_dssp SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------------------HHHHHHHTTCCC
T ss_pred cccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--------------------HHHHHHHcCCCC
Confidence 457889999999999999999999999999999998 89998754211 111112222333
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
..|..+++.+.+||.+||+.||++|||+.+|++.|+.+
T Consensus 232 ~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~ 269 (285)
T d1u59a_ 232 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 269 (285)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 45566678899999999999999999999999988754
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-55 Score=428.72 Aligned_cols=254 Identities=20% Similarity=0.257 Sum_probs=207.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCC--CceEEEEEEcCcCCC-CChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGND--NRRWIAVKKFTKHAW-PDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
+..+++.||+|+||+||+|++..... ....||||++..... .....+.+|+.+|.++ +|||||+++++|.+.+.++
T Consensus 38 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~ 117 (325)
T d1rjba_ 38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY 117 (325)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEE
Confidence 45577889999999999999875321 235799999875432 3356799999999998 8999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcC---------------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceE
Q 009750 147 LVAEYMPNDTLAKHLFHWE---------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVL 205 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~---------------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIl 205 (527)
||||||++|+|.++|+... ...+++..++.|+.||++||.|||+++ ||||||||+|||
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Nil 196 (325)
T d1rjba_ 118 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVL 196 (325)
T ss_dssp EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEE
T ss_pred EEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhccc
Confidence 9999999999999997532 135899999999999999999999999 999999999999
Q ss_pred eCCCCCceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccc
Q 009750 206 FDENGDPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWN 278 (527)
Q Consensus 206 l~~~~~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~ 278 (527)
++.++++||+|||+|+...... +..+|+.|||||++.++.++.++|||||||+||||+| |+.||.+.+...
T Consensus 197 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~-- 274 (325)
T d1rjba_ 197 VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA-- 274 (325)
T ss_dssp EETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--
T ss_pred cccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH--
Confidence 9999999999999998654332 3456899999999999999999999999999999998 899987543211
Q ss_pred cccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 279 TVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.+..++....+.+.|..+++.+.+||.+||+.||++|||+++|+++|..
T Consensus 275 -----------------~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 323 (325)
T d1rjba_ 275 -----------------NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 323 (325)
T ss_dssp -----------------HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----------------HHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence 1122223333444556667889999999999999999999999999853
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=5.5e-55 Score=430.13 Aligned_cols=252 Identities=19% Similarity=0.182 Sum_probs=211.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
..+.+++.||+|+||+||+|++.. +|+.||||+++.....+.+.+.+|+.+|++|+|||||+++++|.+++.+||||
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 105 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKA---TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 105 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECC---CCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 346788999999999999999987 88999999998665444567899999999999999999999999999999999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC--CCCCceeecccCccccCCCC
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD--ENGDPRLSCFGLMKNSRDGK 227 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~--~~~~~kl~DFG~a~~~~~~~ 227 (527)
|||+||+|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+||||+ .++.+||+|||+|+......
T Consensus 106 E~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~ 183 (352)
T d1koba_ 106 EFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 183 (352)
T ss_dssp ECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred EcCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCC
Confidence 99999999988753 3457999999999999999999999999 99999999999998 67899999999998876543
Q ss_pred ---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 228 ---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
...+|+.|+|||++.+..++.++|||||||+||||+||+.||.+.+... ........ ...
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-----------~~~~i~~~------~~~ 246 (352)
T d1koba_ 184 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-----------TLQNVKRC------DWE 246 (352)
T ss_dssp CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-----------HHHHHHHC------CCC
T ss_pred ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHHHHhC------CCC
Confidence 4578999999999999999999999999999999999999997643211 00111100 001
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.........++.+.+||.+||+.||.+|||+.++++|-+
T Consensus 247 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~ 285 (352)
T d1koba_ 247 FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW 285 (352)
T ss_dssp CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred CCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence 112223345677899999999999999999999999843
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-55 Score=417.49 Aligned_cols=255 Identities=22% Similarity=0.290 Sum_probs=204.3
Q ss_pred cccccCCCCCCCeEEEEEecCCC-CCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 73 FIVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 73 ~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+.||+|+||+||+|.++.+. .....||||+++...... .++|.+|+.+|++++|||||+++|++.+.+..++|||
T Consensus 10 ~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e 89 (283)
T d1mqba_ 10 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE 89 (283)
T ss_dssp EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEE
Confidence 35566899999999999987532 123579999997654322 3479999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC---
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK--- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 227 (527)
|+.+|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 90 ~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~ 167 (283)
T d1mqba_ 90 YMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 167 (283)
T ss_dssp CCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred ecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCccc
Confidence 9999999988864 4567999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 228 ----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 228 ----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
...||+.|+|||++.++.++.++|||||||++|||+||..|+...... ..+...+..
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-------------------~~~~~~i~~ 228 (283)
T d1mqba_ 168 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------------------HEVMKAIND 228 (283)
T ss_dssp ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------------------HHHHHHHHT
T ss_pred eEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-------------------HHHHHHHhc
Confidence 235688999999999999999999999999999999977665432110 111122233
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
..+...+..++..+.+||.+||+.||++|||+.+|++.|+.+...
T Consensus 229 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 229 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp TCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred cCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 334445566677899999999999999999999999999987653
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=7.5e-55 Score=428.80 Aligned_cols=251 Identities=18% Similarity=0.158 Sum_probs=210.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~E 150 (527)
.+.+++.||+|+||+||+|+++. +|+.||||++........+.+.+|+.+|++++|||||++++++.+.+.+|||||
T Consensus 27 ~Y~i~~~lG~G~fg~Vy~~~~~~---~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE 103 (350)
T d1koaa2 27 HYDIHEELGTGAFGVVHRVTERA---TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 103 (350)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEEC
T ss_pred CeEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 45688899999999999999987 889999999987654456779999999999999999999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC--CCCCceeecccCccccCCCC-
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD--ENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~--~~~~~kl~DFG~a~~~~~~~- 227 (527)
||+||+|.+++.. ..+.+++..++.|+.||+.||.|||+++ ||||||||+|||++ .++.+||+|||+++......
T Consensus 104 ~~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 181 (350)
T d1koaa2 104 FMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 181 (350)
T ss_dssp CCCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC
T ss_pred cCCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheecccccc
Confidence 9999999999953 4457999999999999999999999999 99999999999995 46889999999998765543
Q ss_pred --ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 228 --SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 228 --~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
+..||+.|||||++.+..++.++|||||||++|||+||+.||.+.+... ......... ...
T Consensus 182 ~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-----------~~~~i~~~~------~~~ 244 (350)
T d1koaa2 182 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-----------TLRNVKSCD------WNM 244 (350)
T ss_dssp EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHHHHHTC------CCS
T ss_pred cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH-----------HHHHHHhCC------CCC
Confidence 4578999999999999999999999999999999999999997643211 011110000 001
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
........++.+.+||.+||+.||++|||+.++++|-+
T Consensus 245 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~ 282 (350)
T d1koaa2 245 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 282 (350)
T ss_dssp CCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTT
T ss_pred CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence 11112334567899999999999999999999999844
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-54 Score=422.76 Aligned_cols=248 Identities=20% Similarity=0.227 Sum_probs=212.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC---CCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH---AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+++.+++.||+|+||.||+|+++. +++.||||++++. .....+++.+|+.+|++++|||||++++++.+.+.+|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~---~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 81 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKA---TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccc
Confidence 356688999999999999999988 8899999999754 2334678999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
||||||+||+|.+++. ....+++..++.++.||+.||+|||+++ ||||||||+|||++.+|++||+|||+|+.....
T Consensus 82 iv~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~ 158 (337)
T d1o6la_ 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EEEECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred cceeccCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccC
Confidence 9999999999999997 4567999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
...+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+... .. ..+..
T Consensus 159 ~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~-----------~~--------~~i~~ 219 (337)
T d1o6la_ 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----------LF--------ELILM 219 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HH--------HHHHH
T ss_pred CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH-----------HH--------HHHhc
Confidence 34689999999999999999999999999999999999999997653211 00 11111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcc
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLAP 344 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~~ 344 (527)
. ...+|...++.+.+||.+||++||.+|++ ++++++|-+.
T Consensus 220 ~--~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f 264 (337)
T d1o6la_ 220 E--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264 (337)
T ss_dssp C--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred C--CCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCccc
Confidence 1 12345556778999999999999999994 8899988543
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-54 Score=409.78 Aligned_cols=249 Identities=23% Similarity=0.355 Sum_probs=201.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEe-CCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD-GDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~ 149 (527)
+..+++.||+|+||.||+|+++ |+.||||+++... ..+.|.+|++++++++|||||+++|+|.+ .+.++|||
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~-----~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ 80 (262)
T d1byga_ 8 ELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 80 (262)
T ss_dssp GEEEEEEEEECSSCEEEEEEET-----TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred HeEEeEEEecCCCeEEEEEEEC-----CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEE
Confidence 4457788999999999999984 5679999997543 45789999999999999999999999965 45689999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-Cc
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-KS 228 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~ 228 (527)
||+++|+|.++|.......+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~ 159 (262)
T d1byga_ 81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 159 (262)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCcc
Confidence 9999999999997544456899999999999999999999998 999999999999999999999999999875543 34
Q ss_pred cccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccCC
Q 009750 229 YSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLEG 307 (527)
Q Consensus 229 ~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (527)
..+|+.|+|||++.+..++.++|||||||++|||+| |++||...+.. .+...+....+.
T Consensus 160 ~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~--------------------~~~~~i~~~~~~ 219 (262)
T d1byga_ 160 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------------------DVVPRVEKGYKM 219 (262)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--------------------GHHHHHTTTCCC
T ss_pred ccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH--------------------HHHHHHHcCCCC
Confidence 567889999999999999999999999999999998 57666543211 111222223344
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 308 NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 308 ~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
+++...++.+.+|+.+||+.||.+|||+.+++++|+.++.
T Consensus 220 ~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 220 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence 5566667789999999999999999999999999988753
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-54 Score=412.14 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=205.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
++..+.+.||+|+||+||+|++++ ++.||||+++... ...+.|.+|+.+|++++|||||+++|+|.+ +..++||
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~----~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~ 90 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNG----TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 90 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT----TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHEEEeeEEeeCCCeEEEEEEECC----CCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEE
Confidence 356688899999999999999974 4569999997554 456789999999999999999999999854 5689999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++|+|..++.......+++..++.|+.||+.||.|||+++ |+||||||+|||||.++++||+|||+++.....
T Consensus 91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~ 169 (285)
T d1fmka3 91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 169 (285)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCce
Confidence 9999999999987655567999999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSH 304 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (527)
....+|+.|+|||++.++.++.++|||||||+||||+||..|+...... ..+...+...
T Consensus 170 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-------------------~~~~~~i~~~ 230 (285)
T d1fmka3 170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------------------REVLDQVERG 230 (285)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------------------HHHHHHHHTT
T ss_pred eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-------------------HHHHHHHHhc
Confidence 2346789999999999999999999999999999999977665432111 0011111222
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 305 LEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 305 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
...+.+..++..+.+||.+||+.||++|||+++|++.|+...
T Consensus 231 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~ 272 (285)
T d1fmka3 231 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 272 (285)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence 233455566778999999999999999999999999988754
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6e-54 Score=416.96 Aligned_cols=246 Identities=21% Similarity=0.259 Sum_probs=211.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC---CCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH---AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
++.+++.||+|+||+||+|+++. +|+.||||++++. .....+.+.+|+.+|++++|||||++++++.+.+.+|+
T Consensus 5 dy~i~~~lG~G~fg~Vy~a~~~~---~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 81 (316)
T d1fota_ 5 DFQILRTLGTGSFGRVHLIRSRH---NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 81 (316)
T ss_dssp GEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred HeEEEEEEecCcCcEEEEEEECC---CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeee
Confidence 56688999999999999999987 8899999999753 23346789999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~- 226 (527)
|||||+||+|..++. ....+++..++.++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 82 vmE~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~ 158 (316)
T d1fota_ 82 IMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 158 (316)
T ss_dssp EECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred EeeecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEecccc
Confidence 999999999999987 5567889999999999999999999999 999999999999999999999999999876554
Q ss_pred CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcccccC
Q 009750 227 KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHLE 306 (527)
Q Consensus 227 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (527)
.+.+||+.|||||++.+..++.++|||||||+||||+||+.||.+.+... . ...+... .
T Consensus 159 ~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-----------~--------~~~i~~~--~ 217 (316)
T d1fota_ 159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-----------T--------YEKILNA--E 217 (316)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------H--------HHHHHHC--C
T ss_pred ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHH-----------H--------HHHHHcC--C
Confidence 45689999999999999999999999999999999999999997643211 0 1111111 1
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhc
Q 009750 307 GNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLA 343 (527)
Q Consensus 307 ~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~ 343 (527)
..++...++.+.+++.+||+.||.+|+ |++++++|-+
T Consensus 218 ~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~ 259 (316)
T d1fota_ 218 LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 259 (316)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcc
Confidence 223445567789999999999999996 8999999854
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-54 Score=415.10 Aligned_cols=247 Identities=18% Similarity=0.171 Sum_probs=206.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC------ChHHHHHHHHHhhcCCCCccceeEEEEEeCCee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP------DPKQFADEAWGVGKLRHKRLANLIGYCCDGDER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 145 (527)
+.+++.||+|+||+||+|+++. +|+.||||++++.... ..+.+.+|+.+|++++|||||++++++.+.+.+
T Consensus 12 Y~~~~~lG~G~fg~Vy~~~~~~---~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 88 (293)
T d1jksa_ 12 YDTGEELGSGQFAVVKKCREKS---TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 88 (293)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred EEEeEEEecCCCeEEEEEEECC---CCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 5678889999999999999987 8899999999754321 246799999999999999999999999999999
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC----CceeecccCcc
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG----DPRLSCFGLMK 221 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~----~~kl~DFG~a~ 221 (527)
+||||||++|+|.+++.. ...+++..++.++.||+.||.|||+.+ ||||||||+|||++.++ .+||+|||+++
T Consensus 89 ~iv~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~ 165 (293)
T d1jksa_ 89 ILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165 (293)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhh
Confidence 999999999999999974 457999999999999999999999999 99999999999998776 49999999998
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
..... .+..+|+.|+|||++.+..++.++|||||||++|||+||+.||.+.+... ...
T Consensus 166 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~-----------~~~-------- 226 (293)
T d1jksa_ 166 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-----------TLA-------- 226 (293)
T ss_dssp ECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHH--------
T ss_pred hcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH-----------HHH--------
Confidence 76543 34578999999999999999999999999999999999999997643111 001
Q ss_pred hhcccccC--CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 299 HLMDSHLE--GNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 299 ~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.+...... ...+...+..+.+||.+||+.||.+|||++++++|-+
T Consensus 227 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~ 273 (293)
T d1jksa_ 227 NVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 273 (293)
T ss_dssp HHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred HHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence 11110000 0011234567889999999999999999999999854
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-54 Score=409.69 Aligned_cols=253 Identities=19% Similarity=0.271 Sum_probs=200.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 149 (527)
.+.+++.||+|+||.||+|++......+..||||+++...... .+.|.+|+.+|++++|||||+++|++. .+.++|||
T Consensus 8 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~ 86 (273)
T d1mp8a_ 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIM 86 (273)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred HeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEE
Confidence 4567788999999999999987654456789999987544322 457999999999999999999999996 46789999
Q ss_pred EecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC---
Q 009750 150 EYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG--- 226 (527)
Q Consensus 150 E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 226 (527)
||+++|+|.+++.. ....+++..++.++.||++||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 87 E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~ 164 (273)
T d1mp8a_ 87 ELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 164 (273)
T ss_dssp ECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred EeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcce
Confidence 99999999998764 4567999999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
....+|+.|+|||++.+..++.++|||||||++|||+| |.+||...+... +...+..
T Consensus 165 ~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~--------------------~~~~i~~ 224 (273)
T d1mp8a_ 165 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--------------------VIGRIEN 224 (273)
T ss_dssp ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------------------HHHHHHT
T ss_pred eccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH--------------------HHHHHHc
Confidence 23456899999999999999999999999999999998 788876542111 1111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 304 HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 304 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
....+.+..+++.+.+||.+||+.||.+|||+.+|+++|+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~ 267 (273)
T d1mp8a_ 225 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 267 (273)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 2223345566778999999999999999999999999998764
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-53 Score=413.32 Aligned_cols=254 Identities=18% Similarity=0.258 Sum_probs=206.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCC-CCceEEEEEEcCcCC-CCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGN-DNRRWIAVKKFTKHA-WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~vAiK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
++.+++.||+|+||+||+|.+...+ .....||||+++... ....++|.+|+.+|++++|||||+++|+|.++ ..+++
T Consensus 10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v 88 (317)
T d1xkka_ 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI 88 (317)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEE
T ss_pred HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEE
Confidence 4668889999999999999987621 112368999987543 33467899999999999999999999999764 57888
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
|||+.+|+|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++++||+|||+++......
T Consensus 89 ~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~ 166 (317)
T d1xkka_ 89 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 166 (317)
T ss_dssp EECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC
T ss_pred EEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceecccccc
Confidence 999999999998875 4667999999999999999999999999 9999999999999999999999999998754322
Q ss_pred -----ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcchhhc
Q 009750 228 -----SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLM 301 (527)
Q Consensus 228 -----~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (527)
...||+.|+|||++.++.++.++|||||||+||||+| |.+||.+.+. ..+...+
T Consensus 167 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~--------------------~~~~~~i 226 (317)
T d1xkka_ 167 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------------------SEISSIL 226 (317)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG--------------------GGHHHHH
T ss_pred cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH--------------------HHHHHHH
Confidence 2357899999999999999999999999999999999 6777754321 1112222
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 302 DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
....+...+..++..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 227 ~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 227 EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp HHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 2233344555667789999999999999999999999999988754
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.8e-53 Score=416.95 Aligned_cols=248 Identities=16% Similarity=0.141 Sum_probs=211.8
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC---CCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH---AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
+.+.+++.||+|+||.||+|+++. +|+.||||++.+. .....+.+.+|+.+|+.++|||||++++++.+....+
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~---~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 117 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKE---SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECC---CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccc
Confidence 457789999999999999999987 8899999998753 2234567999999999999999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+.+|+|..++.. ...+++..++.|+.||+.||.|||+++ ||||||||+||||+.++++||+|||+++.....
T Consensus 118 ~v~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~ 194 (350)
T d1rdqe_ 118 MVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred cccccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence 99999999999999973 457999999999999999999999999 999999999999999999999999999876543
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
.+..||+.|||||++.+..++.++|||||||+||||+||+.||.+.+... .. ..+...
T Consensus 195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-----------~~--------~~i~~~-- 253 (350)
T d1rdqe_ 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-----------IY--------EKIVSG-- 253 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HH--------HHHHHC--
T ss_pred cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHH-----------HH--------HHHhcC--
Confidence 45689999999999999999999999999999999999999997643111 00 111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhcc
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLAP 344 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~~ 344 (527)
...++...++.+.+||.+||+.||.+|+ |++++++|-+.
T Consensus 254 ~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f 297 (350)
T d1rdqe_ 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297 (350)
T ss_dssp CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred CCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccc
Confidence 1123445567799999999999999994 89999988553
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-53 Score=405.27 Aligned_cols=254 Identities=19% Similarity=0.255 Sum_probs=199.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---hHHHHHHHHHhhcCCCCccceeEEEEEeCCeee
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---PKQFADEAWGVGKLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 146 (527)
.++.+++.||+|+||.||+|++.........||||++++..... .++|.+|+.+|++++|||||+++|+|.+ +..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 34568889999999999999986543345679999997654322 3579999999999999999999999975 5678
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
+||||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 87 lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~ 164 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164 (273)
T ss_dssp EEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcccC
Confidence 99999999999988864 3456999999999999999999999999 999999999999999999999999999876443
Q ss_pred C-------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 227 K-------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 227 ~-------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
. ...++..|+|||++.+..++.++|||||||++|||+| |+.||.+.+... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~-------------------~~~ 225 (273)
T d1u46a_ 165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-------------------ILH 225 (273)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-------------------HHH
T ss_pred CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH-------------------HHH
Confidence 2 2346789999999999999999999999999999998 899987543111 011
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 299 HLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
.+.....+.+.+...+..+.+||.+||+.||.+|||+.+|++.|...
T Consensus 226 ~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 226 KIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp HHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 12222233334455667899999999999999999999999988764
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.9e-53 Score=402.12 Aligned_cols=252 Identities=18% Similarity=0.165 Sum_probs=208.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC---------hHHHHHHHHHhhcCC-CCccceeEEE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD---------PKQFADEAWGVGKLR-HKRLANLIGY 138 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~---------~~~~~~E~~~l~~l~-H~nIv~l~~~ 138 (527)
|..+.+++.||+|+||+||+|++.. +++.||||++++..... .+.+.+|+.+|++++ |||||+++++
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~---~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 78 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKP---TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 78 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred cccCEEceEEecCcCeEEEEEEECC---CCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence 4566788899999999999999987 88999999997654322 135889999999996 9999999999
Q ss_pred EEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 139 CCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 139 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
+.+++..|||||||++|+|.++|.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||
T Consensus 79 ~~~~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG 155 (277)
T d1phka_ 79 YETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFG 155 (277)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCT
T ss_pred cccCcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccch
Confidence 9999999999999999999999974 457999999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC---CccccCCccCCcccccC------CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHH
Q 009750 219 LMKNSRDG---KSYSTNLAYTPPEYLRN------GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 219 ~a~~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
+++..... ....||+.|+|||++.+ ..++.++||||+||++|||+||+.||.+.+... ..
T Consensus 156 ~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~-----------~~ 224 (277)
T d1phka_ 156 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-----------ML 224 (277)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HH
T ss_pred heeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH-----------HH
Confidence 99876543 34578999999999863 346889999999999999999999997643211 11
Q ss_pred HHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 290 DMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
........ ..........++.+.+|+.+||+.||++|||+.++++|-+
T Consensus 225 ~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~ 272 (277)
T d1phka_ 225 RMIMSGNY------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 272 (277)
T ss_dssp HHHHHTCC------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred HHHHhCCC------CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHH
Confidence 11111110 1111223356678999999999999999999999998743
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-53 Score=412.08 Aligned_cols=250 Identities=17% Similarity=0.121 Sum_probs=202.5
Q ss_pred ccccccc-CCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcC-CCCccceeEEEEEe----CCe
Q 009750 71 SDFIVSE-SGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCD----GDE 144 (527)
Q Consensus 71 ~~~~~~~-lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~----~~~ 144 (527)
.+.++++ ||+|+||+||+|++.. +++.||||+++. .+.+.+|++++.++ +|||||+++++|.+ ...
T Consensus 12 ~y~i~~~~lG~G~fg~Vy~a~~~~---~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~ 83 (335)
T d2ozaa1 12 DYKVTSQVLGLGINGKVLQIFNKR---TQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 83 (335)
T ss_dssp TEEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred CEEEeeEEeeeccCeEEEEEEECC---CCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCE
Confidence 4557765 9999999999999987 889999999864 35788999997665 89999999999976 356
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC---CCCceeecccCcc
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE---NGDPRLSCFGLMK 221 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG~a~ 221 (527)
+|||||||+||+|.+++.......+++.+++.|+.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++
T Consensus 84 ~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~ 162 (335)
T d2ozaa1 84 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 162 (335)
T ss_dssp EEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-Cccccccccccccccccccccccccccceee
Confidence 899999999999999997544567999999999999999999999999 999999999999985 5679999999998
Q ss_pred ccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcch
Q 009750 222 NSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNIL 298 (527)
Q Consensus 222 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (527)
..... ....||+.|+|||++.+..|+.++|||||||+||+|+||+.||.+.+..... . ....
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~-----------~----~~~~ 227 (335)
T d2ozaa1 163 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----------P----GMKT 227 (335)
T ss_dssp ECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------------------
T ss_pred eccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH-----------H----HHHH
Confidence 65443 3567899999999999999999999999999999999999999754321100 0 0000
Q ss_pred hhcccccCCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 299 HLMDSHLEGN--FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 299 ~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
.+.......+ .....++.+.+||.+||+.||++|||+.++++|-+.
T Consensus 228 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~ 275 (335)
T d2ozaa1 228 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 275 (335)
T ss_dssp CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHH
T ss_pred HHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHh
Confidence 1111111111 113456789999999999999999999999998543
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8e-53 Score=416.86 Aligned_cols=251 Identities=18% Similarity=0.129 Sum_probs=205.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHH---HHHHhhcCCCCccceeEEEEEeCC
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFAD---EAWGVGKLRHKRLANLIGYCCDGD 143 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~---E~~~l~~l~H~nIv~l~~~~~~~~ 143 (527)
+++.+++.||+|+||.||+|++.. +|+.||||++.+.. ......+.+ |+.+++.++|||||++++++.+.+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~---t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~ 80 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKAD---TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 80 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETT---TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred HhCeeeeEEecCCCeEEEEEEECC---CCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC
Confidence 456688899999999999999987 88999999986432 122333444 477888889999999999999999
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
.+|||||||+||+|.+++. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+..
T Consensus 81 ~~~ivmE~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~ 157 (364)
T d1omwa3 81 KLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDF 157 (364)
T ss_dssp EEEEEECCCCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred EEEEEEEecCCCcHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeec
Confidence 9999999999999999997 3467899999999999999999999999 999999999999999999999999999876
Q ss_pred CCC--CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhh
Q 009750 224 RDG--KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHL 300 (527)
Q Consensus 224 ~~~--~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (527)
... ....||+.|+|||++.+ ..++.++|||||||+||||+||+.||.+...... .... ...
T Consensus 158 ~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-----------~~~~-----~~~ 221 (364)
T d1omwa3 158 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----------HEID-----RMT 221 (364)
T ss_dssp SSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH-----------HHHH-----HHS
T ss_pred CCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH-----------HHHH-----Hhc
Confidence 543 45679999999999975 4689999999999999999999999976432211 0000 000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHhcc
Q 009750 301 MDSHLEGNFSSEEATVVFDLASRCLQYEPRERPN-----TKDLVSTLAP 344 (527)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt-----~~~vl~~L~~ 344 (527)
. .....++...++.+.+||.+||+.||.+||| ++++++|-+.
T Consensus 222 ~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f 268 (364)
T d1omwa3 222 L--TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268 (364)
T ss_dssp S--SCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGG
T ss_pred c--cCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccc
Confidence 0 1112234455677999999999999999999 6999988553
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.3e-53 Score=408.99 Aligned_cols=255 Identities=22% Similarity=0.274 Sum_probs=208.2
Q ss_pred cccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
+..+++.||+|+||+||+|+.+. ...+++.||||+++...... .++|.+|+.+|++++||||++++++|......++
T Consensus 14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~ 93 (301)
T d1lufa_ 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 93 (301)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred HcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEE
Confidence 34578899999999999999863 22367889999997654322 4579999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhcC----------------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceE
Q 009750 148 VAEYMPNDTLAKHLFHWE----------------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVL 205 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIl 205 (527)
||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+++ +|||||||+|||
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NIL 172 (301)
T d1lufa_ 94 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCL 172 (301)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEE
T ss_pred EEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccceE
Confidence 999999999999996421 224889999999999999999999999 999999999999
Q ss_pred eCCCCCceeecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCC-CCCCCCccccc
Q 009750 206 FDENGDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH-IPPSHDMVVWN 278 (527)
Q Consensus 206 l~~~~~~kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~-p~~~~~~~~~~ 278 (527)
||.++.+||+|||+++..... .+..+|+.|+|||++.+..++.++|||||||++|||++|.. ||.+.+...
T Consensus 173 ld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e-- 250 (301)
T d1lufa_ 173 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE-- 250 (301)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--
T ss_pred ECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHH--
Confidence 999999999999999754322 23467889999999999999999999999999999999964 555432110
Q ss_pred cccccchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 279 TVPIKFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.... +........+..+++.+.+|+.+||+.||++||||.+|++.|+.+.
T Consensus 251 ---------~~~~---------v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 251 ---------VIYY---------VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp ---------HHHH---------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ---------HHHH---------HHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 1111 1111222344556678999999999999999999999999998874
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-53 Score=411.00 Aligned_cols=248 Identities=16% Similarity=0.205 Sum_probs=208.9
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
|..+.+++.||+|+||+||+|.++. +++.||||+++... .+...+.+|+++|+.++|||||++++++.+.+.+|||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~---~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lv 79 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETS---SKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECC---CCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 5677889999999999999999988 88999999997653 2335688999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC--CCceeecccCccccCCC
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN--GDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~--~~~kl~DFG~a~~~~~~ 226 (527)
||||+||+|.+++.. ....+++.+++.|+.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 80 mE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~ 157 (321)
T d1tkia_ 80 FEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp ECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccC
Confidence 999999999999963 3347999999999999999999999999 9999999999999854 57999999999876554
Q ss_pred C---ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccc
Q 009750 227 K---SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDS 303 (527)
Q Consensus 227 ~---~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (527)
. ...+|+.|+|||.+.+..++.++|||||||++|+|++|..||.+.+... . +..+...
T Consensus 158 ~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~-----------~--------~~~i~~~ 218 (321)
T d1tkia_ 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-----------I--------IENIMNA 218 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-----------H--------HHHHHHT
T ss_pred CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH-----------H--------HHHHHhC
Confidence 3 4568999999999999999999999999999999999999997643110 0 1111111
Q ss_pred ccCCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 304 HLEGNFSS----EEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 304 ~~~~~~~~----~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.. .++. ..+..+.+||.+||+.||.+|||+.|+++|-+
T Consensus 219 ~~--~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~ 260 (321)
T d1tkia_ 219 EY--TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp CC--CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred CC--CCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence 11 1222 23567899999999999999999999999854
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-52 Score=408.36 Aligned_cols=255 Identities=23% Similarity=0.277 Sum_probs=207.6
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCce--EEEEEEcCcCC-CCChHHHHHHHHHhhcC-CCCccceeEEEEEeCCe
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRR--WIAVKKFTKHA-WPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDE 144 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~--~vAiK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 144 (527)
|++..+.+.||+|+||+||+|+++. ++. .||||+++... ....+.|.+|+++|+++ +|||||+++|+|.+.+.
T Consensus 9 ~~~~~~~~~iG~G~fg~Vy~~~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~ 85 (309)
T d1fvra_ 9 WNDIKFQDVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 85 (309)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEE---TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred HHHcEEEEEEeeCCCcEEEEEEECC---CCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCe
Confidence 4455677889999999999999986 443 57888886443 23456899999999999 79999999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhc--------------CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 145 RLLVAEYMPNDTLAKHLFHW--------------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
++|||||+++|+|.++|+.. ....+++..++.++.||+.||.|||+++ ||||||||+|||++.++
T Consensus 86 ~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~ 164 (309)
T d1fvra_ 86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENY 164 (309)
T ss_dssp EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGG
T ss_pred eEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCC
Confidence 99999999999999999642 2467999999999999999999999999 99999999999999999
Q ss_pred CceeecccCccccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCC-CCCCCCccccccccccchh
Q 009750 211 DPRLSCFGLMKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKH-IPPSHDMVVWNTVPIKFNF 286 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~-p~~~~~~~~~~~~~~~~~~ 286 (527)
.+||+|||+++..... ....+|..|+|||.+.+..++.++|||||||++|||++|.. ||.+.+..
T Consensus 165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~----------- 233 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----------- 233 (309)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----------
T ss_pred ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH-----------
Confidence 9999999999765432 34468899999999999999999999999999999999765 45432210
Q ss_pred hHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 287 GALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
.+...+....+...+..+++.+.+||.+||+.||++|||+.+|+++|+.+..
T Consensus 234 ---------~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 285 (309)
T d1fvra_ 234 ---------ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285 (309)
T ss_dssp ---------HHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1111112223344555667889999999999999999999999999998764
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-53 Score=407.70 Aligned_cols=257 Identities=18% Similarity=0.236 Sum_probs=199.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeC-Ce
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDG-DE 144 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~-~~ 144 (527)
+++.+++.||+|+||.||+|.+... ..+++.||||+++..... ..+.+.+|+.++.++ +|+|||.+++++... ..
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~ 92 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 92 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence 4566888999999999999997642 225688999999765432 245688888888888 689999999998765 46
Q ss_pred eeEEEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
+++|||||++|+|.+++.... ...+++..++.++.||++||.|||+++ ||||||||+||||++++
T Consensus 93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~~~ 171 (299)
T d1ywna1 93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKN 171 (299)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGG
T ss_pred EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECCCC
Confidence 899999999999999997532 235899999999999999999999999 99999999999999999
Q ss_pred CceeecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCC-CCCCCCCcccccccccc
Q 009750 211 DPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK-HIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~-~p~~~~~~~~~~~~~~~ 283 (527)
++||+|||+|+..... ....||+.|+|||++.+..++.++|||||||++|||+||. +||.+.+...
T Consensus 172 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~------- 244 (299)
T d1ywna1 172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------- 244 (299)
T ss_dssp CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-------
T ss_pred cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH-------
Confidence 9999999999764432 2346899999999999999999999999999999999975 4665432211
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.+...+........+...++.+.+||.+||+.||.+|||+.+++++|+.+.
T Consensus 245 ------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il 295 (299)
T d1ywna1 245 ------------EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295 (299)
T ss_dssp ------------HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------------HHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 011122222233445556678999999999999999999999999998763
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-52 Score=404.44 Aligned_cols=252 Identities=20% Similarity=0.296 Sum_probs=203.7
Q ss_pred ccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC-CChHHHHHHHHHhhcCCCCccceeEEEEEeC-CeeeEEEEecC
Q 009750 76 SESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW-PDPKQFADEAWGVGKLRHKRLANLIGYCCDG-DERLLVAEYMP 153 (527)
Q Consensus 76 ~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lv~E~~~ 153 (527)
..||+|+||+||+|++..++.+...||||++++... ...++|.+|+++|++++|||||+++|++.+. +..++|||||+
T Consensus 33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~ 112 (311)
T d1r0pa_ 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112 (311)
T ss_dssp EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence 357999999999999977543445799999975432 2246799999999999999999999998764 57899999999
Q ss_pred CCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC-------
Q 009750 154 NDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG------- 226 (527)
Q Consensus 154 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~------- 226 (527)
+|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+||||++++.+||+|||+++.....
T Consensus 113 ~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~ 190 (311)
T d1r0pa_ 113 HGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 190 (311)
T ss_dssp TCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred cCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence 9999999864 4567889999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhccccc
Q 009750 227 -KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMDSHL 305 (527)
Q Consensus 227 -~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (527)
....+|+.|+|||.+.++.++.++|||||||++|||+||+.||...... ..+...+....
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~-------------------~~~~~~i~~g~ 251 (311)
T d1r0pa_ 191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-------------------FDITVYLLQGR 251 (311)
T ss_dssp TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------------------------CHHHHHTTC
T ss_pred cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH-------------------HHHHHHHHcCC
Confidence 1245789999999999999999999999999999999988887543111 01111111122
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccCC
Q 009750 306 EGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQNR 348 (527)
Q Consensus 306 ~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~~ 348 (527)
+...+..++..+.+||.+||+.||++|||+.||+++|+.+...
T Consensus 252 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 252 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 2334445567799999999999999999999999999988653
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-52 Score=408.49 Aligned_cols=245 Identities=19% Similarity=0.259 Sum_probs=206.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC---CCChHHHHHHHHHhh-cCCCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA---WPDPKQFADEAWGVG-KLRHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~l~-~l~H~nIv~l~~~~~~~~~~~ 146 (527)
++.+++.||+|+||+||+|+++. +++.||||++++.. ....+.+.+|+.++. .++|||||++++++.+++.+|
T Consensus 3 dy~i~~~iG~G~fg~Vy~~~~~~---t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~y 79 (320)
T d1xjda_ 3 DFILHKMLGKGSFGKVFLAEFKK---TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 79 (320)
T ss_dssp TEEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred CeEEeeEEecCCCcEEEEEEECC---CCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCcee
Confidence 46678899999999999999988 88999999997542 334567788888776 689999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG 226 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~ 226 (527)
||||||++|+|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||+++++++||+|||+++.....
T Consensus 80 ivmEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~ 156 (320)
T d1xjda_ 80 FVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 156 (320)
T ss_dssp EEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeecCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhcccc
Confidence 9999999999999997 4467899999999999999999999999 999999999999999999999999999864432
Q ss_pred ----CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcchhhcc
Q 009750 227 ----KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNILHLMD 302 (527)
Q Consensus 227 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (527)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.+... .... +..
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~-----------~~~~--------i~~ 217 (320)
T d1xjda_ 157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-----------LFHS--------IRM 217 (320)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----------HHHH--------HHH
T ss_pred cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH-----------HHHH--------HHc
Confidence 34578999999999999999999999999999999999999997643211 1111 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHh
Q 009750 303 SHLEGNFSSEEATVVFDLASRCLQYEPRERPNTK-DLVSTL 342 (527)
Q Consensus 303 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~-~vl~~L 342 (527)
....++...++.+.+||.+||+.||.+|||+. ++++|-
T Consensus 218 --~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hp 256 (320)
T d1xjda_ 218 --DNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 256 (320)
T ss_dssp --CCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSG
T ss_pred --CCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCc
Confidence 11234455667799999999999999999995 787763
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.7e-52 Score=400.82 Aligned_cols=253 Identities=19% Similarity=0.216 Sum_probs=202.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCCh---HHHHHHHHHhhcCCCCccceeEEEEEeCC----
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP---KQFADEAWGVGKLRHKRLANLIGYCCDGD---- 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~---~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---- 143 (527)
.+.+++.||+|+||+||+|++.. +++.||||++++....+. +.|.+|+.+|+.++|||||++++++....
T Consensus 8 rY~i~~~lG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~ 84 (277)
T d1o6ya_ 8 RYELGEILGFGGMSEVHLARDLR---LHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 84 (277)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred eeEEeEEEeeCCCeEEEEEEECC---CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence 35688899999999999999987 889999999987654443 46899999999999999999999998654
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
.+||||||++||+|.+++. ..+.+++.+++.|+.||+.||.|||+++ ||||||||+|||++.++.++|+|||++...
T Consensus 85 ~~~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~ 161 (277)
T d1o6ya_ 85 LPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAI 161 (277)
T ss_dssp EEEEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred eEEEEEECCCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhh
Confidence 3799999999999999987 4467999999999999999999999999 999999999999999999999999988654
Q ss_pred CC-------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 224 RD-------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 224 ~~-------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
.. .....||+.|+|||++.+..++.++|||||||++|||+||++||.+.+.... .........
T Consensus 162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~----------~~~~~~~~~ 231 (277)
T d1o6ya_ 162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV----------AYQHVREDP 231 (277)
T ss_dssp C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----------HHHHHHCCC
T ss_pred ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH----------HHHHHhcCC
Confidence 32 2345789999999999999999999999999999999999999976432110 001111110
Q ss_pred chhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHhcccc
Q 009750 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERP-NTKDLVSTLAPLQ 346 (527)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-t~~~vl~~L~~~~ 346 (527)
.. ........++.+.+||.+||+.||.+|| |++++++.|.++.
T Consensus 232 ~~-------~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 232 IP-------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp CC-------GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CC-------CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 00 0011223456789999999999999998 8999999888764
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-52 Score=405.04 Aligned_cols=257 Identities=19% Similarity=0.186 Sum_probs=198.6
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC-----hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD-----PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~-----~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.|+.||+|+||+||+|+++. +|+.||||+++...... .+.+.+|+.+|++++|||||++++++.+++.++||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~iv 78 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKN---TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV 78 (299)
T ss_dssp EEEEEEEETTEEEEEEECSS---CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEE
T ss_pred cceEeccCcCeEEEEEEECC---CCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeeh
Confidence 46778999999999999987 88999999997653322 34689999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+.++++..++. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 79 mE~~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~ 155 (299)
T d1ua2a_ 79 FDFMETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 155 (299)
T ss_dssp EECCSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred hhhhcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCcc
Confidence 99999887766654 5567999999999999999999999999 999999999999999999999999999765443
Q ss_pred --CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc---Ccch--
Q 009750 227 --KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG---KNIL-- 298 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-- 298 (527)
...++|+.|+|||++.+. .++.++|||||||++|||+||.+||.+.+..... ......... ....
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l-------~~i~~~~~~~~~~~~~~~ 228 (299)
T d1ua2a_ 156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL-------TRIFETLGTPTEEQWPDM 228 (299)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHHHCCCCTTTSSST
T ss_pred cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHH-------HHHHHhcCCCChhhccch
Confidence 345789999999998755 5799999999999999999999999765422100 000000000 0000
Q ss_pred -hhccc---ccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 299 -HLMDS---HLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 299 -~~~~~---~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..... ......+ ...++.+.+|+.+||+.||++|||++|+|+|-+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 282 (299)
T d1ua2a_ 229 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 282 (299)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred hccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHh
Confidence 00000 0000111 123567899999999999999999999999854
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-52 Score=401.13 Aligned_cols=256 Identities=21% Similarity=0.291 Sum_probs=206.3
Q ss_pred CcccccccCCCCCCCeEEEEEecCCC----CCceEEEEEEcCcCCCCC-hHHHHHHHHHhhcC-CCCccceeEEEEEeCC
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGN----DNRRWIAVKKFTKHAWPD-PKQFADEAWGVGKL-RHKRLANLIGYCCDGD 143 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~----~~~~~vAiK~~~~~~~~~-~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 143 (527)
+.+.+++.||+|+||.||+|+..... .++..||||+++...... ..++.+|+..+.++ +|||||+++++|.+++
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 35667889999999999999976532 234689999998654322 35789999999999 8999999999999999
Q ss_pred eeeEEEEecCCCCHhHHhhhcC--------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCC
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWE--------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDEN 209 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~ 209 (527)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ ||||||||+|||++.+
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~~ 171 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 171 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTT
T ss_pred eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecCC
Confidence 9999999999999999997532 245899999999999999999999999 9999999999999999
Q ss_pred CCceeecccCccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHh-CCCCCCCCCccccccccc
Q 009750 210 GDPRLSCFGLMKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS-GKHIPPSHDMVVWNTVPI 282 (527)
Q Consensus 210 ~~~kl~DFG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~ellt-g~~p~~~~~~~~~~~~~~ 282 (527)
+.+||+|||+++..... ....+|+.|+|||++.++.++.++||||||||+|||+| |.+||...+..
T Consensus 172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~------- 244 (299)
T d1fgka_ 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE------- 244 (299)
T ss_dssp CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-------
T ss_pred CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH-------
Confidence 99999999999865432 23467899999999999999999999999999999998 67777543211
Q ss_pred cchhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 283 KFNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.+...+........+...++.+.+||.+||+.||.+|||+.+|++.|+.+.
T Consensus 245 -------------~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~ 295 (299)
T d1fgka_ 245 -------------ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295 (299)
T ss_dssp -------------HHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------------HHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence 111122223334455556678999999999999999999999999998764
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-51 Score=395.80 Aligned_cols=261 Identities=20% Similarity=0.262 Sum_probs=202.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC--ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP--DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.+++.||+|+||+||+|++.. +++.||||+++..... ..+++.+|+.+|++++|||||++++++.+...+|||
T Consensus 3 ~Y~~~~~lG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv 79 (298)
T d1gz8a_ 3 NFQKVEKIGEGTYGVVYKARNKL---TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 79 (298)
T ss_dssp TEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCEeccEEecCcCeEEEEEEECC---CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEE
Confidence 46688899999999999999987 8899999999765322 356899999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+.+ ++..++.......+++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~ 157 (298)
T d1gz8a_ 80 FEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157 (298)
T ss_dssp EECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred EeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcc
Confidence 999976 5556665546678999999999999999999999999 999999999999999999999999999765432
Q ss_pred --CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc------Ccc
Q 009750 227 --KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG------KNI 297 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 297 (527)
....||+.|+|||++.... ++.++|||||||++|+|++|+.||.+.+..... ......... ...
T Consensus 158 ~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~-------~~i~~~~~~~~~~~~~~~ 230 (298)
T d1gz8a_ 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL-------FRIFRTLGTPDEVVWPGV 230 (298)
T ss_dssp CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-------HHHHHHHCCCCTTTSTTG
T ss_pred cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHH-------HHHHHhcCCCchhhcccc
Confidence 3457899999999987765 588999999999999999999999765421100 000000000 000
Q ss_pred hhh------cccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 298 LHL------MDSHLEGNF---SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 298 ~~~------~~~~~~~~~---~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
... ........+ ....+..+.+|+.+||+.||++|||+.|+++|-+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~f 285 (298)
T d1gz8a_ 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285 (298)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred ccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHh
Confidence 000 000000000 0123467899999999999999999999999843
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-52 Score=396.71 Aligned_cols=240 Identities=21% Similarity=0.313 Sum_probs=200.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC------hHHHHHHHHHhhcCC--CCccceeEEEEEeC
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD------PKQFADEAWGVGKLR--HKRLANLIGYCCDG 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~------~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~ 142 (527)
.+.+.+.||+|+||+||+|++.. +++.||||++++....+ ..++.+|+.+|++++ |||||++++++.+.
T Consensus 5 ~Y~i~~~lG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~ 81 (273)
T d1xwsa_ 5 QYQVGPLLGSGGFGSVYSGIRVS---DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81 (273)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred eEEEeEEEeeCCCeEEEEEEECC---CCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence 35577789999999999999987 88999999997653322 245789999999996 89999999999999
Q ss_pred CeeeEEEEecCC-CCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-CCCceeecccCc
Q 009750 143 DERLLVAEYMPN-DTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-NGDPRLSCFGLM 220 (527)
Q Consensus 143 ~~~~lv~E~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-~~~~kl~DFG~a 220 (527)
+..++||||+.+ +++.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++
T Consensus 82 ~~~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a 158 (273)
T d1xwsa_ 82 DSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSG 158 (273)
T ss_dssp SEEEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CeEEEEEEeccCcchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECccccc
Confidence 999999999986 57888886 3467999999999999999999999999 999999999999985 478999999999
Q ss_pred cccCCC--CccccCCccCCcccccCCcC-CCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 221 KNSRDG--KSYSTNLAYTPPEYLRNGRV-TPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 221 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
+..... .+..||+.|+|||++.+..+ +.++|||||||++|||+||+.||...+ ......
T Consensus 159 ~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~----------------~i~~~~-- 220 (273)
T d1xwsa_ 159 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------------EIIRGQ-- 220 (273)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------------HHHHCC--
T ss_pred eecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch----------------HHhhcc--
Confidence 865543 45679999999999987765 667999999999999999999986421 001110
Q ss_pred hhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 298 LHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..++...++++.+||.+||+.||++|||++|+++|-+
T Consensus 221 ---------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~ 257 (273)
T d1xwsa_ 221 ---------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 257 (273)
T ss_dssp ---------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred ---------cCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHh
Confidence 1122334567899999999999999999999999854
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-51 Score=398.74 Aligned_cols=256 Identities=20% Similarity=0.277 Sum_probs=210.0
Q ss_pred cccccccCCCCCCCeEEEEEecC--CCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcC-CCCccceeEEEEEeCCeee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQD--GNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERL 146 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 146 (527)
++.+.+.||+|+||.||+|++.. ...+++.||||+++..... ....|.+|+.+++++ +|||||+++|+|.+....+
T Consensus 24 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~ 103 (311)
T d1t46a_ 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 103 (311)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEE
Confidence 44467789999999999998743 1237789999999865432 244699999999999 7999999999999999999
Q ss_pred EEEEecCCCCHhHHhhhcC----------------CCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC
Q 009750 147 LVAEYMPNDTLAKHLFHWE----------------NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG 210 (527)
Q Consensus 147 lv~E~~~~g~L~~~l~~~~----------------~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~ 210 (527)
||||||++|+|.++++... ...+++..++.++.||+.||.|||+++ +|||||||+|||++.++
T Consensus 104 lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~~ 182 (311)
T d1t46a_ 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGR 182 (311)
T ss_dssp EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTT
T ss_pred EEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccccccccccccC
Confidence 9999999999999997532 235899999999999999999999999 99999999999999999
Q ss_pred CceeecccCccccCCCC------ccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhC-CCCCCCCCcccccccccc
Q 009750 211 DPRLSCFGLMKNSRDGK------SYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSG-KHIPPSHDMVVWNTVPIK 283 (527)
Q Consensus 211 ~~kl~DFG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg-~~p~~~~~~~~~~~~~~~ 283 (527)
.+||+|||+++...... ...+|+.|+|||++.++.++.++|||||||++|||+|+ .+||.+.+..
T Consensus 183 ~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~-------- 254 (311)
T d1t46a_ 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 254 (311)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS--------
T ss_pred cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH--------
Confidence 99999999998765432 34678999999999999999999999999999999995 4445433211
Q ss_pred chhhHHHHHhcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 284 FNFGALDMIRGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
..+..++....+...+...+..+.+||.+||+.||.+|||+.+|++.|+.+.
T Consensus 255 -----------~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i 306 (311)
T d1t46a_ 255 -----------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (311)
T ss_dssp -----------HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----------HHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence 1112233333344445556678999999999999999999999999998653
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-51 Score=395.08 Aligned_cols=256 Identities=20% Similarity=0.291 Sum_probs=207.1
Q ss_pred cccccccCCCCCCCeEEEEEecCC--CCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDG--NDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLL 147 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 147 (527)
+..+++.||+|+||+||+|.+... ..+++.||||+++..... ....|.+|+.++++++|||||+++|+|...+..++
T Consensus 21 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 100 (308)
T d1p4oa_ 21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 100 (308)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred HeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeE
Confidence 445778899999999999988531 114578999999754322 23468999999999999999999999999999999
Q ss_pred EEEecCCCCHhHHhhhc--------CCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccC
Q 009750 148 VAEYMPNDTLAKHLFHW--------ENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~--------~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
||||+++|+|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||+++++++||+|||+
T Consensus 101 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFGl 179 (308)
T d1p4oa_ 101 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 179 (308)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred EEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeeccc
Confidence 99999999999998642 1235789999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCC------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCC-CCCCCCCccccccccccchhhHHHHH
Q 009750 220 MKNSRDG------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK-HIPPSHDMVVWNTVPIKFNFGALDMI 292 (527)
Q Consensus 220 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (527)
++..... ....+|+.|+|||.+.+..++.++|||||||++|||+||. +||.+.+... .....
T Consensus 180 a~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~-----------~~~~i 248 (308)
T d1p4oa_ 180 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-----------VLRFV 248 (308)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-----------HHHHH
T ss_pred ceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH-----------HHHHH
Confidence 9865432 2335789999999999999999999999999999999986 5554322110 11111
Q ss_pred hcCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 293 RGKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
. .......+..++..+.+||.+||+.||.+|||+.+|+++|+....
T Consensus 249 --------~-~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 249 --------M-EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp --------H-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred --------H-hCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 1 112223344556789999999999999999999999999987643
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-51 Score=394.18 Aligned_cols=258 Identities=19% Similarity=0.248 Sum_probs=193.7
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHH--HHHHhhcCCCCccceeEEEEEeCC----eeeE
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFAD--EAWGVGKLRHKRLANLIGYCCDGD----ERLL 147 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~--E~~~l~~l~H~nIv~l~~~~~~~~----~~~l 147 (527)
+.+.||+|+||+||+|++ +|+.||||+++... .+.+.+ |+..+..++|||||+++|+|.+.+ .++|
T Consensus 7 l~~~iG~G~fg~Vy~~~~-----~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l 78 (303)
T d1vjya_ 7 LQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp EEEEEECCSSSEEEEEEE-----TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred EEEEEeeCCCeEEEEEEE-----CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence 445789999999999997 56889999997543 334444 555556789999999999998754 5799
Q ss_pred EEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh--------CCCccccccCCCceEeCCCCCceeecccC
Q 009750 148 VAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS--------EGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 148 v~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~--------~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
||||+++|+|.++|+. ..+++..++.++.|++.||.|||+ ++ ||||||||+||||+.++.+||+|||+
T Consensus 79 v~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl 154 (303)
T d1vjya_ 79 VSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCc
Confidence 9999999999999964 469999999999999999999997 46 99999999999999999999999999
Q ss_pred ccccCCC--------CccccCCccCCcccccCC------cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccch
Q 009750 220 MKNSRDG--------KSYSTNLAYTPPEYLRNG------RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFN 285 (527)
Q Consensus 220 a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~ 285 (527)
++..... ....||+.|+|||++.+. .++.++|||||||+||||+||..||................
T Consensus 155 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~ 234 (303)
T d1vjya_ 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp CEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred cccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccc
Confidence 9764332 245689999999998764 26778999999999999999998775433221111000000
Q ss_pred hhHHHHHhcCcchhhcccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccC
Q 009750 286 FGALDMIRGKNILHLMDSHLEGNF-----SSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQN 347 (527)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~~ 347 (527)
........ ........++.+ +......+.+|+.+||+.||++|||+.+|+++|+.+..
T Consensus 235 ~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 297 (303)
T d1vjya_ 235 DPSVEEMR----KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp SCCHHHHH----HHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cchHHHHH----HHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 00000000 011111222222 23455678999999999999999999999999988753
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.8e-50 Score=388.84 Aligned_cols=259 Identities=19% Similarity=0.235 Sum_probs=201.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.++++||+|+||+||+|+++ +|+.||||+++.... ...+++.+|+.+|++++|||||++++++...+..+++
T Consensus 3 ~Y~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~ 78 (286)
T d1ob3a_ 3 KYHGLEKIGEGTYGVVYKAQNN----YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLV 78 (286)
T ss_dssp SEEEEEEEEEETTEEEEEEEET----TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceeccEEecCCCcEEEEEEeC----CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEE
Confidence 4568899999999999999986 678899999976532 2356899999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCC--
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDG-- 226 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 226 (527)
|||+.++.+..+.. ..+.+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||++......
T Consensus 79 ~e~~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~ 155 (286)
T d1ob3a_ 79 FEHLDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155 (286)
T ss_dssp EECCSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred EEeehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCcc
Confidence 99998876666654 5678999999999999999999999999 999999999999999999999999999765432
Q ss_pred --CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc---C---cc
Q 009750 227 --KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG---K---NI 297 (527)
Q Consensus 227 --~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~ 297 (527)
....+++.|+|||.+.+. .++.++|||||||++|||++|+.||.+.+...... ........ . ..
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~-------~i~~~~~~~~~~~~~~~ 228 (286)
T d1ob3a_ 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM-------RIFRILGTPNSKNWPNV 228 (286)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-------HHHHHHCCCCTTTSTTG
T ss_pred ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHH-------HHHHhhCCCChhhccch
Confidence 344688999999999765 47999999999999999999999997653221000 00000000 0 00
Q ss_pred hhh------c---ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 298 LHL------M---DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 298 ~~~------~---~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
... . .......+....++.+.+|+.+||+.||++|||++|+++|-+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~ 283 (286)
T d1ob3a_ 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283 (286)
T ss_dssp GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred hhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence 000 0 000001112234567899999999999999999999998743
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-50 Score=393.74 Aligned_cols=263 Identities=21% Similarity=0.227 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcC---CCCccceeEEEEEe---
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKL---RHKRLANLIGYCCD--- 141 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~--- 141 (527)
+.+.+++.||+|+||+||+|++... +++.||||+++.... .....+.+|+.+|+.| +|||||+++++|..
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~--~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKN--GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CCEEEEEEEecccCeEEEEEEEECC--CCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 3567899999999999999998652 467899999975432 2244678898888777 79999999999863
Q ss_pred --CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccC
Q 009750 142 --GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGL 219 (527)
Q Consensus 142 --~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~ 219 (527)
....+++|||++++++.... ......+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~ 162 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGL 162 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred ccCceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhh
Confidence 24689999999887665443 335677999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC-
Q 009750 220 MKNSRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK- 295 (527)
Q Consensus 220 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 295 (527)
++..... ....||+.|+|||++.+..++.++||||+||++|||+||+.||.+.+...... .........
T Consensus 163 ~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~-------~i~~~~~~~~ 235 (305)
T d1blxa_ 163 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG-------KILDVIGLPG 235 (305)
T ss_dssp CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-------HHHHHHCCCC
T ss_pred hhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHH-------HHHHhhCCCc
Confidence 8765433 45678999999999999999999999999999999999999997654221000 000000000
Q ss_pred --------cc-hhhccc---ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 296 --------NI-LHLMDS---HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 296 --------~~-~~~~~~---~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.. ...... .....+....++.+.+|+.+||+.||++|||+.|+++|-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpf 295 (305)
T d1blxa_ 236 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 295 (305)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred hhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChh
Confidence 00 000000 0001122334567889999999999999999999999843
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-48 Score=382.52 Aligned_cols=263 Identities=18% Similarity=0.191 Sum_probs=199.1
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCC--CChHHHHHHHHHhhcCCCCccceeEEEEEe-----
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAW--PDPKQFADEAWGVGKLRHKRLANLIGYCCD----- 141 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----- 141 (527)
.+.+.+++.||+|+||+||+|++.. +|+.||||++..... ...+++.+|+.+|++++||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~ 85 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY 85 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cCCEEEEEEEecCcCeEEEEEEECC---CCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccc
Confidence 4567789999999999999999987 889999999875533 235679999999999999999999999865
Q ss_pred ---CCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeeccc
Q 009750 142 ---GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFG 218 (527)
Q Consensus 142 ---~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 218 (527)
....++||||+.++++..... ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||
T Consensus 86 ~~~~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg 162 (318)
T d3blha1 86 NRCKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFG 162 (318)
T ss_dssp -----CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCT
T ss_pred cccCceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecc
Confidence 346899999998876655543 5567899999999999999999999999 9999999999999999999999999
Q ss_pred CccccCCC--------CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHH
Q 009750 219 LMKNSRDG--------KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 219 ~a~~~~~~--------~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
+++..... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+....... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~-------i~ 235 (318)
T d3blha1 163 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL-------IS 235 (318)
T ss_dssp TCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-------HH
T ss_pred eeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHH-------HH
Confidence 99754422 235689999999999765 589999999999999999999999976542211000 00
Q ss_pred HHHhc-----------CcchhhcccccCCCCCH-------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 290 DMIRG-----------KNILHLMDSHLEGNFSS-------EEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 290 ~~~~~-----------~~~~~~~~~~~~~~~~~-------~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
..... ................. ..++.+.+||.+||+.||++|||++|+++|-+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff 308 (318)
T d3blha1 236 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 308 (318)
T ss_dssp HHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred HhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhh
Confidence 00000 00000000000000111 114567899999999999999999999999764
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-49 Score=389.36 Aligned_cols=265 Identities=16% Similarity=0.201 Sum_probs=196.9
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCC-----
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGD----- 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----- 143 (527)
.+.+++.||+|+||+||+|.+.. +|+.||||++++..... .+.+.+|+.+|++++|||||+++++|...+
T Consensus 19 ~Y~~i~~lG~G~fg~V~~~~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 19 VYRDLQPVGSGAYGAVCSAVDGR---TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp SEEEEEEC------CEEEEEETT---TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cEEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence 45688899999999999999987 88999999998654322 357899999999999999999999997654
Q ss_pred -eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 144 -ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 144 -~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
.++|||||+ +.+|..++. ...+++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~ 170 (346)
T d1cm8a_ 96 TDFYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQ 170 (346)
T ss_dssp CCCEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred ceEEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceec
Confidence 479999999 567888774 357999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCC-CccccCCccCCcccccCC-cCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccc----ccchhhHHHHHhc--
Q 009750 223 SRDG-KSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVP----IKFNFGALDMIRG-- 294 (527)
Q Consensus 223 ~~~~-~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~-- 294 (527)
.... ....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+........ .............
T Consensus 171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (346)
T d1cm8a_ 171 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 250 (346)
T ss_dssp CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred cCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchh
Confidence 6654 456789999999999765 5789999999999999999999999776432110000 0000000000000
Q ss_pred -CcchhhcccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 295 -KNILHLMDSHLEG---NFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 295 -~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
......+...... ......++.+.+||.+||..||.+|||+.++|+|-+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~ 303 (346)
T d1cm8a_ 251 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 303 (346)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred hhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChh
Confidence 0000000000000 112234567889999999999999999999999843
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-49 Score=391.52 Aligned_cols=264 Identities=22% Similarity=0.214 Sum_probs=195.9
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCccceeEEEEEeC------Cee
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDG------DER 145 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~ 145 (527)
+..++.||+|+||+||+|++.. +|+.||||+++... ..+.+|+.+|++++|||||+++++|... .++
T Consensus 22 Y~~~k~LG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~ 94 (350)
T d1q5ka_ 22 YTDTKVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 94 (350)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred cEeeeEEeeCcCeEEEEEEECC---CCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence 4467788999999999999988 88999999997653 2345799999999999999999998643 347
Q ss_pred eEEEEecCCCCHhHHhhh-cCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-CceeecccCcccc
Q 009750 146 LLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNS 223 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~-~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~ 223 (527)
+||||||+++.+..+... .....+++..++.|+.||+.||+|||+++ |+||||||+|||++.++ .+||+|||+++..
T Consensus 95 ~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~ 173 (350)
T d1q5ka_ 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173 (350)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhc
Confidence 899999987543333321 24567999999999999999999999999 99999999999999775 8999999999875
Q ss_pred CCC---CccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHh--
Q 009750 224 RDG---KSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIR-- 293 (527)
Q Consensus 224 ~~~---~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~-- 293 (527)
... .+..+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||...+.......-.. .....+....
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~ 253 (350)
T d1q5ka_ 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253 (350)
T ss_dssp CTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC-
T ss_pred cCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccc
Confidence 443 35678999999998875 4689999999999999999999999976543211000000 0000000000
Q ss_pred --cCcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 294 --GKNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 294 --~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
....................++.+.+|+.+||+.||++|||+.|+++|-+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 305 (350)
T d1q5ka_ 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305 (350)
T ss_dssp --CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence 00000000000001112234567899999999999999999999999843
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-48 Score=375.39 Aligned_cols=260 Identities=18% Similarity=0.211 Sum_probs=206.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeCCeeeEE
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLV 148 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 148 (527)
.+.++++||+|+||+||+|++.. +++.||||+++...... .+++.+|+.+|++++|||||++++++.+....++|
T Consensus 3 ry~~i~~LG~G~fg~V~~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv 79 (292)
T d1unla_ 3 KYEKLEKIGEGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp SEEEEEEEEECSSSEEEEEEETT---TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCEeeeEEecCcCeEEEEEEECC---CCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEE
Confidence 56789999999999999999987 88999999997654322 46899999999999999999999999999999999
Q ss_pred EEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCCCC-
Q 009750 149 AEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGK- 227 (527)
Q Consensus 149 ~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 227 (527)
||++.+++|..++. ..+.+++..+..++.|++.||+|||+++ ||||||||+|||++.++.+||+|||.++......
T Consensus 80 ~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~ 156 (292)
T d1unla_ 80 FEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp EECCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS
T ss_pred eeeccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCc
Confidence 99999999988876 5678899999999999999999999999 9999999999999999999999999998765432
Q ss_pred ---ccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcC-------c
Q 009750 228 ---SYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGK-------N 296 (527)
Q Consensus 228 ---~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 296 (527)
...+++.|+|||++.+.. ++.++|||||||++|||++|+.||........... ........ .
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 229 (292)
T d1unla_ 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK-------RIFRLLGTPTEEQWPS 229 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHH-------HHHHHHCCCCTTTCTT
T ss_pred cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHH-------HHHhhcCCCChhhhhh
Confidence 345678899999987665 68999999999999999999998754332110000 00000000 0
Q ss_pred chhhc---------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 297 ILHLM---------DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 297 ~~~~~---------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
..... ............++.+.+|+.+||+.||.+|||++|+|+|-+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~ 285 (292)
T d1unla_ 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285 (292)
T ss_dssp GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred hhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChh
Confidence 00000 000111122344567899999999999999999999999854
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-48 Score=381.55 Aligned_cols=266 Identities=18% Similarity=0.182 Sum_probs=195.3
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-ChHHHHHHHHHhhcCCCCccceeEEEEEeCC----ee
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-DPKQFADEAWGVGKLRHKRLANLIGYCCDGD----ER 145 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~ 145 (527)
.+.+++.||+|+||+||+|++.. +|+.||||++++.... ..+++.+|+.+|++++|||||++++++.... ..
T Consensus 9 rY~~~~~LG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~ 85 (345)
T d1pmea_ 9 RYTNLSYIGEGAYGMVCSAYDNV---NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 85 (345)
T ss_dssp TEEEEEECC---CCCEEEEEETT---TCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred CeEEEEEEeeccCeEEEEEEECC---CCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence 36688999999999999999987 8899999999764422 2457899999999999999999999997653 23
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccCC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~~ 225 (527)
+++++|+.+|+|.+++.. ..+++..++.++.||+.||.|||+++ ||||||||+|||+++++.+||+|||+++....
T Consensus 86 ~~l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~ 161 (345)
T d1pmea_ 86 VYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161 (345)
T ss_dssp EEEEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence 455566679999999963 46999999999999999999999999 99999999999999999999999999976433
Q ss_pred -------CCccccCCccCCcccccC-CcCCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc--chhhHHHHHhcC
Q 009750 226 -------GKSYSTNLAYTPPEYLRN-GRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK--FNFGALDMIRGK 295 (527)
Q Consensus 226 -------~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 295 (527)
....+||+.|+|||++.. ..++.++||||+||++|||++|+.||.+.+.......... ............
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
T d1pmea_ 162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 241 (345)
T ss_dssp GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCC
T ss_pred CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhh
Confidence 234568999999999855 4578999999999999999999999976542210000000 000000000000
Q ss_pred --cchh-hcccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 009750 296 --NILH-LMDSHLEGNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLA 343 (527)
Q Consensus 296 --~~~~-~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~ 343 (527)
.... ..........+ ...+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf 297 (345)
T d1pmea_ 242 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 297 (345)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred hhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence 0000 00000000111 123456889999999999999999999999843
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-49 Score=383.20 Aligned_cols=252 Identities=20% Similarity=0.242 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCC----CCChHHHHHHHHHhhcCCC-CccceeEEEEEeCCe
Q 009750 70 SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA----WPDPKQFADEAWGVGKLRH-KRLANLIGYCCDGDE 144 (527)
Q Consensus 70 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~ 144 (527)
+++.+++.||+|+||+||+|.......+|+.||||++++.. ....+.+.+|+++|++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 45678899999999999999986655578999999997542 2335679999999999966 899999999999999
Q ss_pred eeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccccC
Q 009750 145 RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSR 224 (527)
Q Consensus 145 ~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~~ 224 (527)
.++||||+.+|+|.+++. ....+++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~ 180 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 180 (322)
T ss_dssp EEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred eeeeeecccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhhc
Confidence 999999999999999997 4456788999999999999999999999 9999999999999999999999999997654
Q ss_pred CC-----CccccCCccCCcccccCC--cCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCcc
Q 009750 225 DG-----KSYSTNLAYTPPEYLRNG--RVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKNI 297 (527)
Q Consensus 225 ~~-----~~~~~t~~y~aPE~~~~~--~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (527)
.. .+..+++.|++||.+.+. .++.++|||||||+||||+||+.||.+...... .
T Consensus 181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-------------------~ 241 (322)
T d1vzoa_ 181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-------------------Q 241 (322)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-------------------H
T ss_pred ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-------------------H
Confidence 32 345689999999999765 368899999999999999999999976532211 0
Q ss_pred hhhccc--ccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHhc
Q 009750 298 LHLMDS--HLEGNFSSEEATVVFDLASRCLQYEPRERP-----NTKDLVSTLA 343 (527)
Q Consensus 298 ~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-----t~~~vl~~L~ 343 (527)
..+... .....++...+..+.+|+.+||+.||.+|| |++|+++|-+
T Consensus 242 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpf 294 (322)
T d1vzoa_ 242 AEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 294 (322)
T ss_dssp HHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred HHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHh
Confidence 001000 112234455678899999999999999999 4899998754
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.7e-48 Score=381.13 Aligned_cols=264 Identities=19% Similarity=0.175 Sum_probs=202.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CCccceeEEEEEeC--Cee
Q 009750 69 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDG--DER 145 (527)
Q Consensus 69 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~--~~~ 145 (527)
...+.+++.||+|+||+||+|++.. +++.||||+++.. ..+++.+|+.+|++++ ||||+++++++... ..+
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~~---~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~ 107 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINIT---NNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 107 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred CcCeEEEEEEecCcCeEEEEEEECC---CCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence 3457789999999999999999987 8899999999753 3578999999999995 99999999999754 568
Q ss_pred eEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCC-CceeecccCccccC
Q 009750 146 LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENG-DPRLSCFGLMKNSR 224 (527)
Q Consensus 146 ~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~-~~kl~DFG~a~~~~ 224 (527)
++||||+.+++|..+. ..+++..++.++.||+.||.|||+++ ||||||||+|||++.++ .+||+|||+++...
T Consensus 108 ~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~ 181 (328)
T d3bqca1 108 ALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 181 (328)
T ss_dssp EEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECC
T ss_pred eEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceecc
Confidence 9999999999997764 35999999999999999999999999 99999999999998665 59999999998765
Q ss_pred CC---CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhh------HHHHHhc
Q 009750 225 DG---KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFG------ALDMIRG 294 (527)
Q Consensus 225 ~~---~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~ 294 (527)
.. ....+|+.|+|||.+.+.. ++.++||||+||++|||++|+.||............+....+ .......
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 261 (328)
T d3bqca1 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 261 (328)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccc
Confidence 43 4557899999999987754 799999999999999999999998765432110000000000 0000000
Q ss_pred C---cchhhc--------ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 295 K---NILHLM--------DSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 295 ~---~~~~~~--------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
. ...... ............++++.+||.+||..||++|||++|+|+|-+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F 322 (328)
T d3bqca1 262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322 (328)
T ss_dssp CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred ccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence 0 000000 0011111123345678999999999999999999999998543
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-47 Score=374.04 Aligned_cols=265 Identities=17% Similarity=0.186 Sum_probs=194.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeC------
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG------ 142 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------ 142 (527)
.+.+++.||+|+||+||+|.+.. +|+.||||+++...... .+++.+|+.+|++++|||||+++++|...
T Consensus 18 ~Y~i~~~LG~G~fg~V~~~~d~~---t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~ 94 (355)
T d2b1pa1 18 RYQNLKPIGSGAQGIVCAAYDAV---LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 94 (355)
T ss_dssp TEEEEEECSCC--CEEEEEEETT---TTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred CeEEEEEeecCcCeEEEEEEECC---CCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccC
Confidence 46788999999999999999987 89999999997654322 34689999999999999999999999643
Q ss_pred CeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 143 DERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 143 ~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
..+|+||||+.++ |.+.+. ..+++..++.++.||+.||.|||++| |+||||||+|||++.++.+|++|||+++.
T Consensus 95 ~~~~iv~Ey~~~~-l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~ 168 (355)
T d2b1pa1 95 QDVYLVMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_dssp CEEEEEEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred ceeEEEEeccchH-HHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhc
Confidence 6789999999765 555553 45899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCC---CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccc-------c-----chhh
Q 009750 223 SRDG---KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPI-------K-----FNFG 287 (527)
Q Consensus 223 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~-------~-----~~~~ 287 (527)
.... ....+|+.|+|||++.+..++.++||||+||++|||++|+.||.+.+......... . ....
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 248 (355)
T d2b1pa1 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_dssp ------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHH
T ss_pred cccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhh
Confidence 5543 34578999999999999999999999999999999999999998764321100000 0 0000
Q ss_pred HHHHHhc------CcchhhcccccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 288 ALDMIRG------KNILHLMDSHLEGN---FSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 288 ~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
....... .............. .....+..+.+|+.+||..||++|||++|+|+|-+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~ 314 (355)
T d2b1pa1 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314 (355)
T ss_dssp HHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred HHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCccc
Confidence 0000000 00011111111111 123457789999999999999999999999998543
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=7.6e-47 Score=363.88 Aligned_cols=254 Identities=15% Similarity=0.125 Sum_probs=202.5
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCC-CccceeEEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRH-KRLANLIGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lv~E 150 (527)
+.+++.||+|+||+||+|++.. +++.||||++.... +.+.+.+|+++++.|.| +||+.+++++......++|||
T Consensus 7 Y~i~~~iG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme 81 (293)
T d1csna_ 7 YKVGRRIGEGSFGVIFEGTNLL---NNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 81 (293)
T ss_dssp EEEEEEEEECSSCEEEEEEETT---TTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEecCCCeEEEEEEECC---CCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence 4578889999999999999987 88999999986543 34568899999999965 899999999999999999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCC-----CCCceeecccCccccCC
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDE-----NGDPRLSCFGLMKNSRD 225 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~-----~~~~kl~DFG~a~~~~~ 225 (527)
|+ +++|.+++.. ....+++..+..++.|++.||.|||+++ ||||||||+|||++. ++.+||+|||+|+....
T Consensus 82 ~~-~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~ 158 (293)
T d1csna_ 82 LL-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 158 (293)
T ss_dssp CC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred ec-CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence 99 6799998864 4567999999999999999999999999 999999999999974 57899999999986432
Q ss_pred -----------CCccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhc
Q 009750 226 -----------GKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRG 294 (527)
Q Consensus 226 -----------~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (527)
.....||+.|||||++.+..++.++|||||||++|||+||+.||.+....... ........
T Consensus 159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~--------~~~~~i~~ 230 (293)
T d1csna_ 159 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK--------QKYERIGE 230 (293)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH--------HHHHHHHH
T ss_pred CccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHH--------HHHHHHHh
Confidence 12457899999999999999999999999999999999999999764322110 00000000
Q ss_pred CcchhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 009750 295 KNILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPLQ 346 (527)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~~ 346 (527)
.... .....+. ...++.+.+++..|+..+|.+||+++.+.+.|+.+.
T Consensus 231 ~~~~-~~~~~l~----~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~ 277 (293)
T d1csna_ 231 KKQS-TPLRELC----AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 277 (293)
T ss_dssp HHHH-SCHHHHT----TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred ccCC-CChHHhc----CCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 0000 0000011 123456889999999999999999998888777653
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-47 Score=378.35 Aligned_cols=267 Identities=17% Similarity=0.188 Sum_probs=198.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCC--hHHHHHHHHHhhcCCCCccceeEEEEEeC-----C
Q 009750 71 SDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPD--PKQFADEAWGVGKLRHKRLANLIGYCCDG-----D 143 (527)
Q Consensus 71 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~ 143 (527)
.+.+++.||+|+||+||+|++.. +|+.||||++++..... .+++.+|+.+|++++|||||++++++... .
T Consensus 19 rY~i~~~LG~G~fg~Vy~a~~~~---~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 19 RYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp TEEEEEECGGGTTSSEEEEEETT---TTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CeEEEEEEecCCCeEEEEEEECC---CCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 36688999999999999999987 89999999998654332 35789999999999999999999998643 3
Q ss_pred eeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceeecccCcccc
Q 009750 144 ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNS 223 (527)
Q Consensus 144 ~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~~ 223 (527)
..+++|+|+.+|+|.+++. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+|++|||++...
T Consensus 96 ~~~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~ 171 (348)
T d2gfsa1 96 NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 171 (348)
T ss_dssp CCCEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CC
T ss_pred ceEEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhccc
Confidence 4567778888999999994 457999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-CccccCCccCCcccccCCc-CCCCcccchhhHHHHHHHhCCCCCCCCCcccccccccc----chhhHHHHHhcCcc
Q 009750 224 RDG-KSYSTNLAYTPPEYLRNGR-VTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIK----FNFGALDMIRGKNI 297 (527)
Q Consensus 224 ~~~-~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 297 (527)
... .+..||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+.......... ..............
T Consensus 172 ~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 251 (348)
T d2gfsa1 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251 (348)
T ss_dssp TGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHH
T ss_pred CcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhh
Confidence 433 4567899999999977654 68899999999999999999999987643211000000 00000000000000
Q ss_pred hhhcccccC-CCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 009750 298 LHLMDSHLE-GNFS-----SEEATVVFDLASRCLQYEPRERPNTKDLVSTLAP 344 (527)
Q Consensus 298 ~~~~~~~~~-~~~~-----~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~ 344 (527)
......... .... ...++.+.+||.+||..||.+|||+.|+++|-+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f 304 (348)
T d2gfsa1 252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304 (348)
T ss_dssp HHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred hhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhh
Confidence 000000000 0000 1235678899999999999999999999998543
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.3e-47 Score=365.93 Aligned_cols=253 Identities=15% Similarity=0.091 Sum_probs=194.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCcccee-EEEEEeCCeeeEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANL-IGYCCDGDERLLVAE 150 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l-~~~~~~~~~~~lv~E 150 (527)
+.+++.||+|+||+||+|++.. +++.||||++.... ..+++.+|+++++.++|+|+|.. .+++.+....++|||
T Consensus 9 Y~l~~~iG~G~fG~Vy~a~~~~---~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme 83 (299)
T d1ckia_ 9 YRLGRKIGSGSFGDIYLGTDIA---AGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 83 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETT---TTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred EEEeEEEeeCCCcEEEEEEECC---CCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence 5678899999999999999987 78999999987643 23568999999999987765554 555577788999999
Q ss_pred ecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeC---CCCCceeecccCccccCCC-
Q 009750 151 YMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD---ENGDPRLSCFGLMKNSRDG- 226 (527)
Q Consensus 151 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~---~~~~~kl~DFG~a~~~~~~- 226 (527)
|+. ++|...+.. ....+++..++.++.||+.||+|||+++ ||||||||+|||++ .+..+||+|||+|+.....
T Consensus 84 ~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (299)
T d1ckia_ 84 LLG-PSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 160 (299)
T ss_dssp CCC-CBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred EcC-Cchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccc
Confidence 994 577766653 4567999999999999999999999999 99999999999985 4557999999999865432
Q ss_pred ----------CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHHHHHhcCc
Q 009750 227 ----------KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGALDMIRGKN 296 (527)
Q Consensus 227 ----------~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (527)
.+..||+.|||||++.+..++.++|||||||++|||+||+.||.......... .........
T Consensus 161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~--------~~~~~~~~~ 232 (299)
T d1ckia_ 161 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ--------KYERISEKK 232 (299)
T ss_dssp TCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC---------------HHHHHHHH
T ss_pred cccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH--------HHHHhhccc
Confidence 24478999999999999999999999999999999999999997643221100 000000000
Q ss_pred chhhcccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 009750 297 ILHLMDSHLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVSTLAPL 345 (527)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~L~~~ 345 (527)
........ ...+++++.+|+.+||+.||.+||+++++.+.|+.+
T Consensus 233 -~~~~~~~~----~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 276 (299)
T d1ckia_ 233 -MSTPIEVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276 (299)
T ss_dssp -HHSCHHHH----TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred -CCCChhHh----ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 00000001 122346688999999999999999999887777654
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-41 Score=338.21 Aligned_cols=266 Identities=17% Similarity=0.189 Sum_probs=195.0
Q ss_pred ccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-----------CCccceeEEEEE
Q 009750 72 DFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-----------HKRLANLIGYCC 140 (527)
Q Consensus 72 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~~ 140 (527)
+.++++||+|+||+||+|++.. +|+.||||++++.. ...+.+.+|+.+++.++ |+|||++++++.
T Consensus 15 Y~i~~~LG~G~fg~Vy~~~~~~---~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~ 90 (362)
T d1q8ya_ 15 YILVRKLGWGHFSTVWLAKDMV---NNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 90 (362)
T ss_dssp EEEEEEEEECSSEEEEEEEETT---TTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEECC---CCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence 6789999999999999999987 89999999997543 12357889999998885 578999999886
Q ss_pred eC--CeeeEEEEecCCCC-HhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh-CCCccccccCCCceEeCCCCC-----
Q 009750 141 DG--DERLLVAEYMPNDT-LAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS-EGRPLYHDLNAYRVLFDENGD----- 211 (527)
Q Consensus 141 ~~--~~~~lv~E~~~~g~-L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~-~~~ivH~Dlkp~NIll~~~~~----- 211 (527)
.. ...+++|+++..+. ............+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~ 169 (362)
T d1q8ya_ 91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLI 169 (362)
T ss_dssp EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEE
T ss_pred eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCcccccc
Confidence 53 45667777765543 3333334456788999999999999999999998 77 999999999999986654
Q ss_pred -ceeecccCccccCCC-CccccCCccCCcccccCCcCCCCcccchhhHHHHHHHhCCCCCCCCCccccccccccchhhHH
Q 009750 212 -PRLSCFGLMKNSRDG-KSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHDMVVWNTVPIKFNFGAL 289 (527)
Q Consensus 212 -~kl~DFG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwslGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 289 (527)
+||+|||.+...... ....+|+.|+|||++.+..++.++||||+||+++||++|+.||...+...+....... ....
T Consensus 170 ~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~-~~~~ 248 (362)
T d1q8ya_ 170 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI-AQII 248 (362)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH-HHHH
T ss_pred eeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHH-HHHH
Confidence 999999999765443 4567899999999999999999999999999999999999998754322111000000 0000
Q ss_pred HHH---------hcCcchhhc---------cc----------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 009750 290 DMI---------RGKNILHLM---------DS----------HLEGNFSSEEATVVFDLASRCLQYEPRERPNTKDLVST 341 (527)
Q Consensus 290 ~~~---------~~~~~~~~~---------~~----------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rpt~~~vl~~ 341 (527)
..+ ......... .. .....+....++.+.+|+.+||..||.+|||++|+|+|
T Consensus 249 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 249 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred HHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 000000000 00 01123456678899999999999999999999999998
Q ss_pred hc
Q 009750 342 LA 343 (527)
Q Consensus 342 L~ 343 (527)
-+
T Consensus 329 p~ 330 (362)
T d1q8ya_ 329 PW 330 (362)
T ss_dssp GG
T ss_pred cc
Confidence 54
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=2.4e-25 Score=199.07 Aligned_cols=162 Identities=17% Similarity=0.095 Sum_probs=119.5
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCC-------------C-----hHHHHHHHHHhhcCCCCcccee
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWP-------------D-----PKQFADEAWGVGKLRHKRLANL 135 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~-------------~-----~~~~~~E~~~l~~l~H~nIv~l 135 (527)
+...||+|+||+||+|.+. +|+.||||+++..... . ...+.+|...+.++.|++++..
T Consensus 4 vg~~IG~G~~g~Vy~a~~~----~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~ 79 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSE----KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKV 79 (191)
T ss_dssp EEEEEEECSSEEEEEEEET----TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCE
T ss_pred hCCEeeeCcceEEEEEECC----CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceE
Confidence 4567899999999999986 6788999987642110 0 1235678899999999999998
Q ss_pred EEEEEeCCeeeEEEEecCCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhhCCCccccccCCCceEeCCCCCceee
Q 009750 136 IGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLS 215 (527)
Q Consensus 136 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~~~~ivH~Dlkp~NIll~~~~~~kl~ 215 (527)
+++. ..+++|||+++..+.. ++......++.|++.+|.|||+++ |+||||||+|||+++++ ++|+
T Consensus 80 ~~~~----~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~li 144 (191)
T d1zara2 80 YAWE----GNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWII 144 (191)
T ss_dssp EEEE----TTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEEC
T ss_pred EEec----CCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEE
Confidence 8763 2379999998865533 333445679999999999999999 99999999999999765 8999
Q ss_pred cccCccccCCCCccccCCccCC------cccccCCcCCCCcccchhhHHH
Q 009750 216 CFGLMKNSRDGKSYSTNLAYTP------PEYLRNGRVTPESVIFSFGTVL 259 (527)
Q Consensus 216 DFG~a~~~~~~~~~~~t~~y~a------PE~~~~~~~~~~~DvwslGvvl 259 (527)
|||+|......... .|.. .+.+ ...|+.++|+||+.--+
T Consensus 145 DFG~a~~~~~~~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 145 DFPQSVEVGEEGWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CCTTCEETTSTTHH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred ECCCcccCCCCCcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 99999765433211 0111 0111 35688999999976544
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=6.5e-20 Score=149.33 Aligned_cols=108 Identities=21% Similarity=0.351 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..++.+|+.++..|+|++|+..|+++|+.+|. ++.+|+++|.+|..+|++++|+.++.++++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 4677899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHccccccccccC
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
+..+|++++|+.+|+++++++|++...+.
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 109 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNPQLKE 109 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999999999987653
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.78 E-value=5.4e-19 Score=158.39 Aligned_cols=108 Identities=22% Similarity=0.354 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
+++.+.++|+.+++.|+|++|+..|++||+++|. ++.+|+++|.||.++|+|++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHccccccccccC
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
|..+|+|++|+..|++|++++|++...|.
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~~~~~ 110 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQRLNFG 110 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 99999999999999999999998776653
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=1.1e-18 Score=150.52 Aligned_cols=110 Identities=20% Similarity=0.301 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHH
Q 009750 414 QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQ 493 (527)
Q Consensus 414 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~ 493 (527)
.++.++.++.+|+.+++.|+|++|+..|++|++++|. +..+|+++|.||+.+|++++|+.+|+++|+++|+++.+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 4577899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 494 AVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 494 g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|.++..+|++++|+.+|+++++++|++...+
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~ 115 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDKDAK 115 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999999987654
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.73 E-value=1.5e-17 Score=141.93 Aligned_cols=112 Identities=17% Similarity=0.204 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC---------------HHHHHHHHHHHHhcCChHHHHHHHH
Q 009750 413 QQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS---------------PTVYARRSLCHLMCDQPDAALRDAM 477 (527)
Q Consensus 413 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~g~~~~A~~~~~ 477 (527)
++++.+..++..|+.+|+.|+|.+|+..|++||+..+... ..+|.|+|.||+++|++++|+++++
T Consensus 12 e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~ 91 (153)
T d2fbna1 12 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 91 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhh
Confidence 4667899999999999999999999999999998655421 3478999999999999999999999
Q ss_pred HHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 478 QAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 478 ~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+||+++|+++++|+++|.+|..+|++++|+.+|++|++++|+|..++
T Consensus 92 ~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~ 138 (153)
T d2fbna1 92 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 138 (153)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred ccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999987664
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=3.4e-17 Score=142.40 Aligned_cols=114 Identities=16% Similarity=0.174 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC--------------HHHHHHHHHHHHhcCChHHHHHHH
Q 009750 411 WTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS--------------PTVYARRSLCHLMCDQPDAALRDA 476 (527)
Q Consensus 411 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~--------------~~~~~~~~~~~~~~g~~~~A~~~~ 476 (527)
+.++++.+..+++.|+.+|+.|+|++|+..|++||+..|... ..+|.++|.||+++|+|++|+.++
T Consensus 6 ~~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~ 85 (170)
T d1p5qa1 6 SEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESC 85 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchh
Confidence 445667799999999999999999999999999999876521 367889999999999999999999
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 477 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 477 ~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|+|..+.
T Consensus 86 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~ 133 (170)
T d1p5qa1 86 NKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 133 (170)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred hhhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987653
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.71 E-value=5.1e-17 Score=141.08 Aligned_cols=114 Identities=12% Similarity=0.175 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC--------------CHHHHHHHHHHHHhcCChHHHHHHH
Q 009750 411 WTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV--------------SPTVYARRSLCHLMCDQPDAALRDA 476 (527)
Q Consensus 411 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~--------------~~~~~~~~~~~~~~~g~~~~A~~~~ 476 (527)
..+.++.++.++++|+.+++.|+|.+|+..|++||..-+.. ...+|.|+|.||+++|+|++|+.++
T Consensus 8 ~~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~ 87 (168)
T d1kt1a1 8 TKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECC 87 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhh
Confidence 44566789999999999999999999999999999753321 1456889999999999999999999
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 477 MQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 477 ~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+++++++|+++.+|+++|.+|..+|+|++|+.+|+++++++|+|..++
T Consensus 88 ~~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~ 135 (168)
T d1kt1a1 88 DKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 135 (168)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHH
T ss_pred hhhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987654
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.70 E-value=3.8e-17 Score=142.08 Aligned_cols=114 Identities=15% Similarity=0.228 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc----------------CCCCCHHHHHHHHHHHHhcCChHHHH
Q 009750 410 EWTQQMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDV----------------GTMVSPTVYARRSLCHLMCDQPDAAL 473 (527)
Q Consensus 410 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~~~~~~~~~~g~~~~A~ 473 (527)
+.......+..+...|..++..|+|++|+..|++||+. +|. ...+|.++|.||.++|+|++|+
T Consensus 19 ~~~~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai 97 (169)
T d1ihga1 19 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAV 97 (169)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhh
Confidence 34445566788899999999999999999999999863 344 6778999999999999999999
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 474 RDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 474 ~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.+|.+||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|+|..++
T Consensus 98 ~~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~ 148 (169)
T d1ihga1 98 DSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 148 (169)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999999987653
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.3e-16 Score=131.59 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcH-------H
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWS-------T 488 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~-------~ 488 (527)
+.+..++++|+.++..|+|++|+.+|++||+++|. ++.+++++|.||.++|+|++|+.++++||+++|+++ .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 45788999999999999999999999999999999 999999999999999999999999999999999875 4
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 489 AFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 489 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
+|+++|.++..++++++|+.+|++++..++..
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 112 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRTP 112 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCH
Confidence 77788889999999999999999999887753
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.64 E-value=5.6e-16 Score=124.45 Aligned_cols=94 Identities=11% Similarity=0.041 Sum_probs=91.3
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 009750 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK 499 (527)
Q Consensus 420 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~ 499 (527)
..+..|..+++.|++++|+..|+++++.+|. ++.+|.++|.++.++|++++|+.+|+++++++|+++.+|+.+|.+|..
T Consensus 18 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~~ 96 (112)
T d1hxia_ 18 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 96 (112)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHHH
Confidence 3577899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHH
Q 009750 500 LDMHKDAADMLKEAA 514 (527)
Q Consensus 500 ~~~~~~A~~~~~~al 514 (527)
+|++++|++.|+++|
T Consensus 97 ~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 97 EHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 999999999999987
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=6.5e-16 Score=143.64 Aligned_cols=106 Identities=17% Similarity=0.026 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..+..++.+|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|++.|+++++++|+++.+|+++|.
T Consensus 35 ~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 113 (259)
T d1xnfa_ 35 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGI 113 (259)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHHH
Confidence 46889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQR 522 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~ 522 (527)
+|..+|++++|+..|+++++++|++..
T Consensus 114 ~~~~~g~~~~A~~~~~~al~~~p~~~~ 140 (259)
T d1xnfa_ 114 ALYYGGRDKLAQDDLLAFYQDDPNDPF 140 (259)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHhhHHHHHHHHHHHHhhccccHH
Confidence 999999999999999999999998654
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=2.2e-15 Score=133.50 Aligned_cols=102 Identities=15% Similarity=0.111 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.++..++.+|..++..|+|++|++.|+++ .+. ++.+|+++|.+|+.+|++++|+++|++||+++|+++.+|+++|.
T Consensus 3 ~~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~ 78 (192)
T d1hh8a_ 3 VEAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 78 (192)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 45677889999999999999999999874 455 78999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
+|..+|+|++|+.+|++|++..+.+.
T Consensus 79 ~~~~~g~~~~A~~~~~kAl~~~~~n~ 104 (192)
T d1hh8a_ 79 LYYQTEKYDLAIKDLKEALIQLRGNQ 104 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHhhccHHHHHHHHHHHHHhCccCc
Confidence 99999999999999999999877653
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=8.1e-16 Score=125.06 Aligned_cols=101 Identities=8% Similarity=-0.005 Sum_probs=92.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcC---ChHHHHHHHHHHHHhCCCc--HHHHHHHHHHH
Q 009750 423 KRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCD---QPDAALRDAMQAQCVYPDW--STAFYMQAVAL 497 (527)
Q Consensus 423 ~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g---~~~~A~~~~~~ai~~~p~~--~~~~~~~g~~~ 497 (527)
.+++.+...++|++|.+.|++|+.++|. ++.+++++|.|+++.+ ++++|+..++++++.+|.. .++||++|.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 4677889999999999999999999999 9999999999998754 5567999999999998765 56999999999
Q ss_pred HHcCChHHHHHHHHHHHcccccccccc
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
..+|+|++|+.+|+++|+++|++..++
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~~~A~ 109 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQNNQAK 109 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence 999999999999999999999998764
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.55 E-value=1.9e-15 Score=127.25 Aligned_cols=100 Identities=11% Similarity=0.025 Sum_probs=90.4
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhc----------CChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 425 GDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMC----------DQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 425 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~----------g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
+..+-+.+.|++|+..|++|++++|. ++.+++++|.++..+ +.+++|++.|++|++++|+++.+|+++|
T Consensus 4 ~~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG 82 (145)
T d1zu2a1 4 ETEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIG 82 (145)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHH
Confidence 34566788999999999999999999 999999999999865 4558999999999999999999999999
Q ss_pred HHHHHcCC-----------hHHHHHHHHHHHccccccccccC
Q 009750 495 VALAKLDM-----------HKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 495 ~~~~~~~~-----------~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
.+|..+|+ |++|++.|++|++++|++..+|+
T Consensus 83 ~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~ 124 (145)
T d1zu2a1 83 NAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 124 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHH
Confidence 99988764 79999999999999999987764
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=2.8e-14 Score=126.25 Aligned_cols=103 Identities=18% Similarity=0.162 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc-----------
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----------- 486 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~----------- 486 (527)
+..++.+|.+++..|+|++|+++|++||+++|+ ++.+|+++|.+|.++|++++|+++|++|++..+.+
T Consensus 36 ~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~ 114 (192)
T d1hh8a_ 36 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 114 (192)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred HHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhh
Confidence 557899999999999999999999999999999 99999999999999999999999999999876543
Q ss_pred -----HHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 487 -----STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 487 -----~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
.++++++|.++..+|++++|++.|++|+++.|+..
T Consensus 115 ~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~ 154 (192)
T d1hh8a_ 115 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 154 (192)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred cccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcc
Confidence 57899999999999999999999999999988753
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.53 E-value=1.6e-14 Score=123.33 Aligned_cols=110 Identities=18% Similarity=0.188 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-----------CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhC
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----------SPTVYARRSLCHLMCDQPDAALRDAMQAQCVY 483 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----------~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~ 483 (527)
+.++-.+...|..++..|+|++|+..|++||++.|.. ...+|.++|.+|..+|+|++|++++++++++.
T Consensus 6 ~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~ 85 (156)
T d2hr2a1 6 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 85 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcc
Confidence 4455666677999999999999999999999987652 14689999999999999999999999999875
Q ss_pred CC-----------cHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 484 PD-----------WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 484 p~-----------~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|. ...+|+++|.+|..+|++++|+..|++|+++.|+....+
T Consensus 86 ~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~~~~ 137 (156)
T d2hr2a1 86 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET 137 (156)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC
T ss_pred cccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhhchH
Confidence 42 355899999999999999999999999999999876554
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=3.4e-14 Score=136.36 Aligned_cols=107 Identities=17% Similarity=0.215 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..+..+|..+...|++++|+..|++++..+|. ++.+|+++|.+|..+|++++|++.|+++++++|+++.+|+++|.+|
T Consensus 172 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 250 (323)
T d1fcha_ 172 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 250 (323)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 566788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHccccccccccC
Q 009750 498 AKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 498 ~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
..+|++++|+..|++||+++|++...+.
T Consensus 251 ~~~g~~~~A~~~~~~al~l~p~~~~~~~ 278 (323)
T d1fcha_ 251 INLGAHREAVEHFLEALNMQRKSRGPRG 278 (323)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC-----
T ss_pred HHCCCHHHHHHHHHHHHHhCCcChhhhh
Confidence 9999999999999999999999877653
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=3.2e-14 Score=136.34 Aligned_cols=111 Identities=6% Similarity=0.029 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHH
Q 009750 414 QMRDMLEARKRGDVAFREK-EFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 414 ~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
...+..+++.+|.++...| ++++|+..|+++++++|. +..+|+++|.++..+|++++|++.+.++++++|++..+|++
T Consensus 73 nP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~ 151 (315)
T d2h6fa1 73 NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQH 151 (315)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHHHH
Confidence 4456889999999999877 599999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 493 QAVALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 493 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
+|.++..+|++++|+.+|+++|+++|.+..+|.
T Consensus 152 ~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~~ 184 (315)
T d2h6fa1 152 RQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 184 (315)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHCCccHHHHH
Confidence 999999999999999999999999999988773
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=5.2e-14 Score=134.84 Aligned_cols=107 Identities=10% Similarity=-0.008 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ-PDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~-~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
-++++..+|.++.+.+.+++|++.|++||+++|. +..+|+++|.++..+|+ +++|+.+++++++++|++..+|+++|.
T Consensus 42 ~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~~ 120 (315)
T d2h6fa1 42 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRV 120 (315)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHhH
Confidence 4667778899999999999999999999999999 99999999999999875 899999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 496 ALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 496 ~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
++..+|++++|+..|++|++++|++..+|
T Consensus 121 ~~~~l~~~~eAl~~~~kal~~dp~n~~a~ 149 (315)
T d2h6fa1 121 LVEWLRDPSQELEFIADILNQDAKNYHAW 149 (315)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhhccHHHHHHHHhhhhhhhhcchHHH
Confidence 99999999999999999999999998877
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=8.5e-13 Score=126.38 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=98.8
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 009750 421 ARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKL 500 (527)
Q Consensus 421 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~ 500 (527)
.+++|..+++.|+|++|+..|+++|+.+|. ++.+|+++|.+|..+|++++|+..|.++++++|+++.+|+.+|.+|..+
T Consensus 22 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 100 (323)
T d1fcha_ 22 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 100 (323)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccccccc
Confidence 467899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHcccccccccc
Q 009750 501 DMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 501 ~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|++++|+..|++++.++|.+...+
T Consensus 101 ~~~~~A~~~~~~~~~~~~~~~~~~ 124 (323)
T d1fcha_ 101 SLQRQACEILRDWLRYTPAYAHLV 124 (323)
T ss_dssp TCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred ccccccccchhhHHHhccchHHHH
Confidence 999999999999999999876544
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=5.7e-13 Score=129.84 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
++..+..+|..+...|++++|++.|+.++...|. +..++..+|.++..+|++++|++.|+++++++|+++.+|+++|.+
T Consensus 270 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 348 (388)
T d1w3ba_ 270 FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 348 (388)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4778899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHHHHcccccccccc
Q 009750 497 LAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 497 ~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
|..+|++++|+..|++|++++|++..+|
T Consensus 349 ~~~~g~~~~A~~~~~~al~l~P~~~~a~ 376 (388)
T d1w3ba_ 349 LQQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HHTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999988776
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=5.7e-13 Score=102.91 Aligned_cols=83 Identities=14% Similarity=-0.021 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC------CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV------SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFY 491 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~ 491 (527)
++..+++|.++++.|+|.+|+..|++|+++.|.. ...++.++|.++.++|++++|+..|+++|+++|+++.+++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 5778999999999999999999999999875431 3688999999999999999999999999999999999999
Q ss_pred HHHHHHHHc
Q 009750 492 MQAVALAKL 500 (527)
Q Consensus 492 ~~g~~~~~~ 500 (527)
+++.+...+
T Consensus 85 Nl~~~~~~l 93 (95)
T d1tjca_ 85 NLKYFEYIM 93 (95)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 998876654
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=1.3e-12 Score=127.25 Aligned_cols=101 Identities=14% Similarity=0.091 Sum_probs=96.6
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Q 009750 422 RKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLD 501 (527)
Q Consensus 422 ~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~ 501 (527)
+++|..+++.|+|++|++.|+++++.+|. +..+++.+|.+|..+|++++|+..|+++++++|+++.+|+.+|.+|..+|
T Consensus 3 l~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g 81 (388)
T d1w3ba_ 3 MELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERG 81 (388)
T ss_dssp CTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhc
Confidence 46799999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHccccccccc
Q 009750 502 MHKDAADMLKEAASLEEKRQRS 523 (527)
Q Consensus 502 ~~~~A~~~~~~al~l~p~~~~~ 523 (527)
++++|+..|.++++.+|.+...
T Consensus 82 ~~~~A~~~~~~~~~~~~~~~~~ 103 (388)
T d1w3ba_ 82 QLQEAIEHYRHALRLKPDFIDG 103 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHH
T ss_pred cccccccccccccccccccccc
Confidence 9999999999999999876543
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=1.6e-11 Score=98.69 Aligned_cols=82 Identities=10% Similarity=-0.008 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
.++..+..+|.+++..|+|++|+..|.++++++|. ++.+|+++|.++..+|++++|+..|+++++++|+++.++..++.
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 113 (117)
T d1elwa_ 35 HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQN 113 (117)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred cchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44889999999999999999999999999999999 99999999999999999999999999999999999999999988
Q ss_pred HHH
Q 009750 496 ALA 498 (527)
Q Consensus 496 ~~~ 498 (527)
+..
T Consensus 114 l~~ 116 (117)
T d1elwa_ 114 MEA 116 (117)
T ss_dssp HHH
T ss_pred HhC
Confidence 753
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=1.8e-11 Score=112.97 Aligned_cols=95 Identities=13% Similarity=0.099 Sum_probs=85.0
Q ss_pred hhhhHHHHHHHHHHhhhcCCC---CCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHH
Q 009750 430 REKEFKTAVDCYSQFIDVGTM---VSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDA 506 (527)
Q Consensus 430 ~~~~~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A 506 (527)
...+++.|+..+++++...+. ..+.+|+++|.+|..+|++++|+..|++||+++|+++.+|+++|.+|..+|++++|
T Consensus 11 ~~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A 90 (259)
T d1xnfa_ 11 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 90 (259)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHh
Confidence 345677888888888865332 15679999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcccccccccc
Q 009750 507 ADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 507 ~~~~~~al~l~p~~~~~~ 524 (527)
+..|+++++++|++..+|
T Consensus 91 ~~~~~~al~~~p~~~~a~ 108 (259)
T d1xnfa_ 91 YEAFDSVLELDPTYNYAH 108 (259)
T ss_dssp HHHHHHHHHHCTTCTHHH
T ss_pred hhhhhHHHHHHhhhhhhH
Confidence 999999999999988765
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.23 E-value=3.1e-11 Score=103.88 Aligned_cols=91 Identities=18% Similarity=0.157 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
..+..+..+|.++++.|+|++|+..|++||+++|. ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.
T Consensus 75 ~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~ 153 (169)
T d1ihga1 75 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLK 153 (169)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45677888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHH
Q 009750 496 ALAKLDMHKDAA 507 (527)
Q Consensus 496 ~~~~~~~~~~A~ 507 (527)
++..+..+.++.
T Consensus 154 ~~~~l~~~~~~~ 165 (169)
T d1ihga1 154 VKQKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998877766653
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.19 E-value=1.4e-10 Score=100.39 Aligned_cols=105 Identities=11% Similarity=0.096 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC---------------------CHHHHHHHHHHHHhcCChHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV---------------------SPTVYARRSLCHLMCDQPDAAL 473 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~---------------------~~~~~~~~~~~~~~~g~~~~A~ 473 (527)
....+.++..|..+...|++++|+..|++|+++.+.+ ...++.+++.++..+|++++|+
T Consensus 8 ~~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al 87 (179)
T d2ff4a2 8 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 87 (179)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 3557889999999999999999999999999986642 1257899999999999999999
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHH-------Hccccc
Q 009750 474 RDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEA-------ASLEEK 519 (527)
Q Consensus 474 ~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a-------l~l~p~ 519 (527)
.+++++++++|.+..+|..++.+|..+|++.+|+..|+++ |.++|.
T Consensus 88 ~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 88 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 9999999999999999999999999999999999999998 566765
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=1.9e-11 Score=94.11 Aligned_cols=73 Identities=11% Similarity=-0.088 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc-------HHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 452 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW-------STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~-------~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.++-.+++|.++++.|+|.+|+.+|++|+++.|.+ .++++++|.++..+|++++|+..|++||+++|++..++
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~ 83 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHH
Confidence 45678899999999999999999999999986543 78999999999999999999999999999999998765
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.17 E-value=9.4e-11 Score=100.67 Aligned_cols=87 Identities=16% Similarity=0.198 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
+..+.++|.++++.|+|++|+.+++++++++|. +..+|+++|.+|..+|+|++|+.+|.++++++|+++.++..++.+.
T Consensus 64 ~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 142 (168)
T d1kt1a1 64 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQ 142 (168)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 556778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHH
Q 009750 498 AKLDMHKD 505 (527)
Q Consensus 498 ~~~~~~~~ 505 (527)
..++++.+
T Consensus 143 ~~~~~~~e 150 (168)
T d1kt1a1 143 KKAKEHNE 150 (168)
T ss_dssp HHHHHHHH
T ss_pred HHHHhHHH
Confidence 88887654
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=7.3e-11 Score=101.57 Aligned_cols=89 Identities=15% Similarity=0.195 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
...+..+|.++++.|+|++|+.++++||+++|. +..+|+++|.||..+|+|++|+.+|+++++++|+++.+...++.++
T Consensus 62 ~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 140 (170)
T d1p5qa1 62 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 140 (170)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 446778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHH
Q 009750 498 AKLDMHKDAA 507 (527)
Q Consensus 498 ~~~~~~~~A~ 507 (527)
..++++.+..
T Consensus 141 ~~~~~~~~~e 150 (170)
T d1p5qa1 141 QRIRRQLARE 150 (170)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887776554
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=1e-10 Score=99.50 Aligned_cols=112 Identities=16% Similarity=0.054 Sum_probs=92.3
Q ss_pred CccccchhhhHHHH-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 009750 400 DEGTNELSFQEWTQ-QMRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQ 478 (527)
Q Consensus 400 ~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 478 (527)
+...+-..++..+. ...++..+..+|.+++..|++++|+..|++||+++|. +..+|+++|.++..+|++++|+.++++
T Consensus 25 ~y~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~ 103 (159)
T d1a17a_ 25 DYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYET 103 (159)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHhhhccccchhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 33334444444443 2345889999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHH--HcCChHHHHHHHHH
Q 009750 479 AQCVYPDWSTAFYMQAVALA--KLDMHKDAADMLKE 512 (527)
Q Consensus 479 ai~~~p~~~~~~~~~g~~~~--~~~~~~~A~~~~~~ 512 (527)
+++++|+++.++..++.+.. ..+.+++|+.....
T Consensus 104 a~~~~p~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~ 139 (159)
T d1a17a_ 104 VVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEH 139 (159)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 99999999999998887754 44557777654433
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.14 E-value=4.6e-11 Score=95.08 Aligned_cols=71 Identities=15% Similarity=-0.010 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 454 TVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
..++++|.++++.|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|++..+|
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 87 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 87 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccch
Confidence 34688999999999999999999999999999999999999999999999999999999999999998876
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.13 E-value=5.1e-11 Score=97.32 Aligned_cols=72 Identities=13% Similarity=-0.008 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 453 PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 453 ~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+..+-++|.+++..|+|++|+..|.++|+++|+++.+++++|.+|..+|+|++|+.+|++|++++|++...|
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 75 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999999999988765
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.12 E-value=8.8e-11 Score=99.12 Aligned_cols=84 Identities=11% Similarity=0.120 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVAL 497 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~ 497 (527)
...+.++|.++++.|+|++|+.+|++||+++|. +..+|+++|.+|..+|++++|+.+|+++++++|++..+...++.+.
T Consensus 67 ~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 145 (153)
T d2fbna1 67 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 145 (153)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456778999999999999999999999999999 9999999999999999999999999999999999999999999887
Q ss_pred HHcCC
Q 009750 498 AKLDM 502 (527)
Q Consensus 498 ~~~~~ 502 (527)
.++++
T Consensus 146 ~kl~~ 150 (153)
T d2fbna1 146 NKLKE 150 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76643
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.11 E-value=7.7e-11 Score=104.10 Aligned_cols=73 Identities=12% Similarity=0.030 Sum_probs=70.1
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 452 SPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
++..+...|..|++.|+|++|+..|.+||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+|
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~ 75 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 75 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHH
Confidence 4677889999999999999999999999999999999999999999999999999999999999999998876
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.02 E-value=1.9e-10 Score=95.93 Aligned_cols=91 Identities=13% Similarity=0.025 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHh----------hhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCC-----------hHHHH
Q 009750 415 MRDMLEARKRGDVAFR----------EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ-----------PDAAL 473 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~----------~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~-----------~~~A~ 473 (527)
.++++.++..|.+++. .+.+++|+..|++||+++|+ ++.+|+++|.+|..+|+ |++|+
T Consensus 28 P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~ 106 (145)
T d1zu2a1 28 PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLAT 106 (145)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhHHHhh
Confidence 3558899999999885 46668999999999999999 99999999999988764 79999
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHH
Q 009750 474 RDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDA 506 (527)
Q Consensus 474 ~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A 506 (527)
+.|++|++++|++..++..++.+....+.+.++
T Consensus 107 ~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 107 QFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987666555554
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=5e-10 Score=90.14 Aligned_cols=96 Identities=9% Similarity=0.015 Sum_probs=79.9
Q ss_pred chhhhHHHHH-HHHHHHHHHHHHHHHh---hhhHHHHHHHHHHhhhcCCCCC-HHHHHHHHHHHHhcCChHHHHHHHHHH
Q 009750 405 ELSFQEWTQQ-MRDMLEARKRGDVAFR---EKEFKTAVDCYSQFIDVGTMVS-PTVYARRSLCHLMCDQPDAALRDAMQA 479 (527)
Q Consensus 405 ~~~~~~~~~~-~~~~~~~~~~g~~~~~---~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~~g~~~~A~~~~~~a 479 (527)
...|+..+.. ..+++.++..|.++++ .+++++|+..|++++..+|.+. ..+|+++|.+|+++|+|++|+++|+++
T Consensus 19 e~~Y~~aL~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~a 98 (122)
T d1nzna_ 19 EKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGL 98 (122)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3444444432 2447899999999986 6788899999999999987622 468999999999999999999999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHc
Q 009750 480 QCVYPDWSTAFYMQAVALAKL 500 (527)
Q Consensus 480 i~~~p~~~~~~~~~g~~~~~~ 500 (527)
|+++|++.++...++.+..++
T Consensus 99 L~~~P~~~~A~~l~~~I~~~~ 119 (122)
T d1nzna_ 99 LQTEPQNNQAKELERLIDKAM 119 (122)
T ss_dssp HHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhCcCCHHHHHHHHHHHHHH
Confidence 999999999999999887654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=2e-10 Score=116.59 Aligned_cols=107 Identities=8% Similarity=-0.044 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH
Q 009750 415 MRDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA 494 (527)
Q Consensus 415 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g 494 (527)
......+...|..+.+.|++++|+..|.+++..++. .++.++|.++...|++++|+.+|.+|++++|+++.+|+++|
T Consensus 117 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg 193 (497)
T d1ya0a1 117 LPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLA 193 (497)
T ss_dssp --------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHH
T ss_pred hhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 355777889999999999999999999999988554 78999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.++...|++.+|+.+|.+||.++|....++
T Consensus 194 ~~~~~~~~~~~A~~~y~ral~~~~~~~~a~ 223 (497)
T d1ya0a1 194 ILASSKGDHLTTIFYYCRSIAVKFPFPAAS 223 (497)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSSBCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhCCCCCHHHH
Confidence 999999999999999999999999876654
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.87 E-value=4.2e-09 Score=96.74 Aligned_cols=100 Identities=9% Similarity=0.046 Sum_probs=85.8
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHH----------
Q 009750 425 GDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQA---------- 494 (527)
Q Consensus 425 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g---------- 494 (527)
+..+++.|++++|+..|+++++.+|. +..++.++|.+|...|++++|++.++++++++|++..++..++
T Consensus 3 ~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~~ 81 (264)
T d1zbpa1 3 WKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARK 81 (264)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhccccH
Confidence 56778899999999999999999999 9999999999999999999999999999988888777665544
Q ss_pred -------------------------HHHHHcCChHHHHHHHHHHHccccccccccC
Q 009750 495 -------------------------VALAKLDMHKDAADMLKEAASLEEKRQRSGR 525 (527)
Q Consensus 495 -------------------------~~~~~~~~~~~A~~~~~~al~l~p~~~~~~~ 525 (527)
.++...|++++|++.+++++++.|.....|.
T Consensus 82 ~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~~~ 137 (264)
T d1zbpa1 82 DFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLAN 137 (264)
T ss_dssp HHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEEET
T ss_pred HHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCcccc
Confidence 4444468899999999999999998877664
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.86 E-value=5e-09 Score=100.24 Aligned_cols=106 Identities=8% Similarity=-0.065 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCC--hHHHHHHHHHHHHhCCCcHHHH-HHHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ--PDAALRDAMQAQCVYPDWSTAF-YMQA 494 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~--~~~A~~~~~~ai~~~p~~~~~~-~~~g 494 (527)
...+...+..+...|++++|+.+|+++++.+|. ++.+|+++|.++..+++ +++|+..+.++++++|.+..++ +..|
T Consensus 73 l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~ 151 (334)
T d1dcea1 73 LQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRF 151 (334)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHH
Confidence 344555667777888888999999999998888 88889998888887765 7889999999999999888875 4677
Q ss_pred HHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 495 VALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 495 ~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.++...+++++|+..|+++++++|++..+|
T Consensus 152 ~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~ 181 (334)
T d1dcea1 152 VAAQAAVAPAEELAFTDSLITRNFSNYSSW 181 (334)
T ss_dssp HHHHTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred HHHHhccccHHHHHHHHHHHHcCCCCHHHH
Confidence 888888899999999999999999887776
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.76 E-value=5.5e-09 Score=97.91 Aligned_cols=103 Identities=14% Similarity=0.062 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcC-----CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc------
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVG-----TMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW------ 486 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~------ 486 (527)
++.|.+.|+.+...|+|++|+++|.+|+++. +.....+|.++|.||.++|++++|++.+++++++.+..
T Consensus 37 a~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 116 (290)
T d1qqea_ 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRG 116 (290)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhH
Confidence 6678888999999999999999999999862 22135789999999999999999999999999987665
Q ss_pred HHHHHHHHHHHHH-cCChHHHHHHHHHHHcccccc
Q 009750 487 STAFYMQAVALAK-LDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 487 ~~~~~~~g~~~~~-~~~~~~A~~~~~~al~l~p~~ 520 (527)
..++.++|.+|.. +|++++|++.|++|+++.+..
T Consensus 117 ~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~ 151 (290)
T d1qqea_ 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (290)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 6789999999865 699999999999999987653
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.74 E-value=2.5e-08 Score=95.20 Aligned_cols=94 Identities=13% Similarity=0.061 Sum_probs=83.7
Q ss_pred hhhh-HHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCC----------hHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 009750 430 REKE-FKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQ----------PDAALRDAMQAQCVYPDWSTAFYMQAVALA 498 (527)
Q Consensus 430 ~~~~-~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~----------~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~ 498 (527)
..++ +++|++.++++|+++|+ ++.+|..++.++..+++ +++|+..++++++.+|+++.+|+.+|.++.
T Consensus 40 ~~~~~~~~al~~~~~~l~~~P~-~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~~ 118 (334)
T d1dcea1 40 QAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118 (334)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhhHHHH
Confidence 4444 48999999999999999 99999998888766544 789999999999999999999999999999
Q ss_pred HcCC--hHHHHHHHHHHHcccccccccc
Q 009750 499 KLDM--HKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 499 ~~~~--~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.+++ +++|+..++++++++|++..+|
T Consensus 119 ~~~~~~~~~a~~~~~~al~~~~~~~~~~ 146 (334)
T d1dcea1 119 RLPEPNWARELELCARFLEADERNFHCW 146 (334)
T ss_dssp TCSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhccccHHHHHHHHHHHHhhCchhhhhh
Confidence 8875 7999999999999999987765
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.69 E-value=2e-08 Score=93.88 Aligned_cols=105 Identities=12% Similarity=-0.107 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC-----CHHHHHHHHHHHHh-cCChHHHHHHHHHHHHhCCC-----
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV-----SPTVYARRSLCHLM-CDQPDAALRDAMQAQCVYPD----- 485 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~~-~g~~~~A~~~~~~ai~~~p~----- 485 (527)
.+..|...|.++.+.|++++|+++|++++++.+.. ...++.++|.+|.. +|++++|++.|++|+++.+.
T Consensus 76 ~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~ 155 (290)
T d1qqea_ 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (290)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 36788899999999999999999999999875441 16778899988865 69999999999999987432
Q ss_pred -cHHHHHHHHHHHHHcCChHHHHHHHHHHHccccccc
Q 009750 486 -WSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 486 -~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
...++.++|.+|..+|+|++|+..|++++++.+.+.
T Consensus 156 ~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~ 192 (290)
T d1qqea_ 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred hhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccch
Confidence 356799999999999999999999999999998764
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.63 E-value=8.4e-08 Score=91.02 Aligned_cols=105 Identities=10% Similarity=-0.093 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCC----HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCc-----
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVS----PTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDW----- 486 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~----~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~----- 486 (527)
-.++....+|.+++..|++++|+..|++|++..|..+ ..++..+|.+|..+|++++|+..|++++++.+..
T Consensus 10 ~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 89 (366)
T d1hz4a_ 10 MHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHY 89 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchHH
Confidence 4577777889999999999999999999999988833 3578899999999999999999999999876533
Q ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHcccccc
Q 009750 487 -STAFYMQAVALAKLDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 487 -~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 520 (527)
..+++.+|.++...|++..|+..+.+++.+.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~ 124 (366)
T d1hz4a_ 90 ALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 124 (366)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhc
Confidence 5678999999999999999999999999887654
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.61 E-value=8.9e-08 Score=87.90 Aligned_cols=137 Identities=12% Similarity=-0.006 Sum_probs=90.3
Q ss_pred ccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEEEEec
Q 009750 74 IVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVAEYM 152 (527)
Q Consensus 74 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~E~~ 152 (527)
.+...+-++.+.||+... +++.+.||+...........+.+|+..+..+. +--+.+++.++..++..++||+++
T Consensus 18 ~~~~~~G~s~~~v~rv~~-----~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l 92 (263)
T d1j7la_ 18 CVKDTEGMSPAKVYKLVG-----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA 92 (263)
T ss_dssp EEECSCCCSSSEEEEEEC-----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred EEEcCCCCCCCcEEEEEe-----CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEec
Confidence 444434445578998864 34457888887665555567889999988773 444678888888889999999999
Q ss_pred CCCCHhHHhhhcCCCCcCHHHHHHHHHHHHHHHHHhhh------------------------------------------
Q 009750 153 PNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS------------------------------------------ 190 (527)
Q Consensus 153 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~aL~~lH~------------------------------------------ 190 (527)
+|.++.+..... .. ...++.++++.|..||+
T Consensus 93 ~G~~~~~~~~~~----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T d1j7la_ 93 DGVLCSEEYEDE----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp SSEEHHHHTTTC----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCS
T ss_pred cccccccccccc----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccch
Confidence 998876543210 00 11122233333333331
Q ss_pred -----------C----C-CccccccCCCceEeCCCCCceeecccCccc
Q 009750 191 -----------E----G-RPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 191 -----------~----~-~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
. . .++|+|+.|.|||+++++.+-|+||+.+..
T Consensus 166 ~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 1 0 168999999999999876677999987643
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.50 E-value=3.2e-07 Score=71.82 Aligned_cols=74 Identities=8% Similarity=0.001 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHHHhcC---ChHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 451 VSPTVYARRSLCHLMCD---QPDAALRDAMQAQCVYPDW-STAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 451 ~~~~~~~~~~~~~~~~g---~~~~A~~~~~~ai~~~p~~-~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
+...+.++.|.|+.+.. +..+|+..++.+++.+|.+ .+.+|++|.+|+.+|+|++|+.+++++|+++|+|..++
T Consensus 33 ~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~ 110 (124)
T d2pqrb1 33 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 110 (124)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHH
Confidence 35667777777777553 3456777777777777765 47777788888888888888888888888888776654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.47 E-value=2.2e-07 Score=93.71 Aligned_cols=85 Identities=13% Similarity=-0.031 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVA 496 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~ 496 (527)
....+..+|..+..+|+|++|+.+|++|++++|. +..+|+++|.++...|++.+|+.+|.+||.++|.++.|+.+++.+
T Consensus 151 ~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~ 229 (497)
T d1ya0a1 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3467888999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCC
Q 009750 497 LAKLDM 502 (527)
Q Consensus 497 ~~~~~~ 502 (527)
+....+
T Consensus 230 ~~~~~~ 235 (497)
T d1ya0a1 230 LSKALE 235 (497)
T ss_dssp HHHHTT
T ss_pred HHHhhh
Confidence 876543
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=3.2e-07 Score=86.89 Aligned_cols=102 Identities=9% Similarity=-0.019 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCC---CHHHHHHHHHHHHhcCChHHHHHHHHHHHH------hCCCcHH
Q 009750 418 MLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMV---SPTVYARRSLCHLMCDQPDAALRDAMQAQC------VYPDWST 488 (527)
Q Consensus 418 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~------~~p~~~~ 488 (527)
+..+...|..+...|++++|...+.++++..+.. ....+.++|.++..+|++++|+..+++++. ..|+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 292 (366)
T d1hz4a_ 213 SNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNR 292 (366)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHH
Confidence 5567778999999999999999999999887653 256788899999999999999999999984 4567788
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHccccc
Q 009750 489 AFYMQAVALAKLDMHKDAADMLKEAASLEEK 519 (527)
Q Consensus 489 ~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 519 (527)
+++.+|.+|..+|++++|+..|++|+++.+.
T Consensus 293 ~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~ 323 (366)
T d1hz4a_ 293 NLLLLNQLYWQAGRKSDAQRVLLDALKLANR 323 (366)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999998765
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.42 E-value=2e-07 Score=78.13 Aligned_cols=70 Identities=19% Similarity=0.097 Sum_probs=60.8
Q ss_pred HHHHHHH--HHHHHhcCChHHHHHHHHHHHHhCCCcH------------HHHHHHHHHHHHcCChHHHHHHHHHHHcccc
Q 009750 453 PTVYARR--SLCHLMCDQPDAALRDAMQAQCVYPDWS------------TAFYMQAVALAKLDMHKDAADMLKEAASLEE 518 (527)
Q Consensus 453 ~~~~~~~--~~~~~~~g~~~~A~~~~~~ai~~~p~~~------------~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p 518 (527)
..+|..+ |..++..|+|++|+..|++||++.|+.+ .+|.++|.+|..+|+|++|+.+|+++|++.|
T Consensus 7 a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 3455555 7788899999999999999999988753 6899999999999999999999999999988
Q ss_pred cccc
Q 009750 519 KRQR 522 (527)
Q Consensus 519 ~~~~ 522 (527)
+...
T Consensus 87 ~~~~ 90 (156)
T d2hr2a1 87 RRGE 90 (156)
T ss_dssp HHCC
T ss_pred cccc
Confidence 6544
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.40 E-value=7.9e-07 Score=69.54 Aligned_cols=81 Identities=5% Similarity=-0.159 Sum_probs=67.9
Q ss_pred HHHHHHHHHHH---hhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 009750 419 LEARKRGDVAF---REKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAV 495 (527)
Q Consensus 419 ~~~~~~g~~~~---~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~ 495 (527)
+.-++.|..+. ...+.++||..++.+++.+|....++++++|.+|+++|+|++|.++++++|+++|++.++...+-.
T Consensus 36 qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~ 115 (124)
T d2pqrb1 36 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 115 (124)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHH
Confidence 44555666665 447788999999999999887345899999999999999999999999999999999999887766
Q ss_pred HHHH
Q 009750 496 ALAK 499 (527)
Q Consensus 496 ~~~~ 499 (527)
+-.+
T Consensus 116 Ie~~ 119 (124)
T d2pqrb1 116 VEDK 119 (124)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.24 E-value=4.2e-06 Score=78.28 Aligned_cols=101 Identities=11% Similarity=0.043 Sum_probs=89.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHH-hcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 009750 420 EARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHL-MCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 498 (527)
Q Consensus 420 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~-~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~ 498 (527)
.+...+....+.|++++|.+.|.+|++..|. +...|...|.... ..|+.+.|...|+++++..|+++..|...+..+.
T Consensus 136 ~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~ 214 (308)
T d2onda1 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 3556677788889999999999999999998 8888988887654 4689999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHccccccc
Q 009750 499 KLDMHKDAADMLKEAASLEEKRQ 521 (527)
Q Consensus 499 ~~~~~~~A~~~~~~al~l~p~~~ 521 (527)
..|+++.|...|++|++..|.+.
T Consensus 215 ~~g~~~~aR~~fe~ai~~~~~~~ 237 (308)
T d2onda1 215 HLNEDNNTRVLFERVLTSGSLPP 237 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSCG
T ss_pred HcCChHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999877543
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.18 E-value=4.6e-06 Score=78.04 Aligned_cols=106 Identities=8% Similarity=-0.055 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 009750 419 LEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALA 498 (527)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~ 498 (527)
..+...+......|++++|...|+++++..|.+...+|...+......|+++.|.+.|+++++..|.....|...|....
T Consensus 100 ~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~ 179 (308)
T d2onda1 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 179 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 34566677888999999999999999999888456689999999999999999999999999999999999999998754
Q ss_pred -HcCChHHHHHHHHHHHcccccccccc
Q 009750 499 -KLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 499 -~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
..|+.+.|...|+++++.+|++...|
T Consensus 180 ~~~~~~~~a~~i~e~~l~~~p~~~~~w 206 (308)
T d2onda1 180 YCSKDKSVAFKIFELGLKKYGDIPEYV 206 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhccCHHHHHHHHHHHHHhhhhhHHHH
Confidence 46899999999999999999987766
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.17 E-value=6.3e-06 Score=75.05 Aligned_cols=99 Identities=14% Similarity=0.090 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCCCcHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWSTAFYM 492 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~ai~~~p~~~~~~~~ 492 (527)
++++++.+|..++..+||++|+++|++|.+. . +..+++++|.+|.. ..++..|..++..+... .++.+.+.
T Consensus 1 ~p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g-~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~--~~~~a~~~ 75 (265)
T d1ouva_ 1 DPKELVGLGAKSYKEKDFTQAKKYFEKACDL--K-ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--NYSNGCHL 75 (265)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCcchhHHHHHHhhcccccc--cccchhhc
Confidence 3678999999999999999999999999987 3 67999999999998 77999999999997764 58899999
Q ss_pred HHHHHHH----cCChHHHHHHHHHHHcccccc
Q 009750 493 QAVALAK----LDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 493 ~g~~~~~----~~~~~~A~~~~~~al~l~p~~ 520 (527)
+|.++.. ..+.+.|+..|+++.+.++..
T Consensus 76 l~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~~ 107 (265)
T d1ouva_ 76 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAE 107 (265)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred cccccccccccchhhHHHHHHHhhhhhhhhhh
Confidence 9998876 568899999999999876653
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.12 E-value=1.6e-06 Score=79.07 Aligned_cols=64 Identities=16% Similarity=-0.043 Sum_probs=59.5
Q ss_pred HHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCChHHHHHHHHHHHcccccccccc
Q 009750 461 LCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDAADMLKEAASLEEKRQRSG 524 (527)
Q Consensus 461 ~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~~~ 524 (527)
.-.+..|++++|+..++++++.+|+++.++..+|.+|...|++++|++.|+++++++|++...+
T Consensus 4 ~~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~ 67 (264)
T d1zbpa1 4 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 67 (264)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 3456789999999999999999999999999999999999999999999999999999977654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.10 E-value=4.8e-06 Score=80.68 Aligned_cols=77 Identities=16% Similarity=0.090 Sum_probs=51.0
Q ss_pred cccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcC------C-CCChHHHHHHHHHhhcC-CC--CccceeEEEEEeCCe
Q 009750 75 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKH------A-WPDPKQFADEAWGVGKL-RH--KRLANLIGYCCDGDE 144 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~------~-~~~~~~~~~E~~~l~~l-~H--~nIv~l~~~~~~~~~ 144 (527)
..++|.|....||++.... +++.|+||.-... . .....+...|++.|+.+ .+ ..+.+++.+ +...
T Consensus 31 ~~eig~G~~N~vfrV~~~~---~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~ 105 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQE---HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEM 105 (392)
T ss_dssp EEECCSSSSEEEEEEEC-------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTT
T ss_pred EEEeCCCceEeEEEEEeCC---CCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCC
Confidence 4478999999999998876 5677999964421 1 12345667788888877 33 345666654 4556
Q ss_pred eeEEEEecCCCC
Q 009750 145 RLLVAEYMPNDT 156 (527)
Q Consensus 145 ~~lv~E~~~~g~ 156 (527)
.++|||++++..
T Consensus 106 ~~lvmE~L~~~~ 117 (392)
T d2pula1 106 AVTVMEDLSHLK 117 (392)
T ss_dssp TEEEECCCTTSE
T ss_pred CEEEEeccCCcc
Confidence 789999997754
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.01 E-value=9.8e-06 Score=73.34 Aligned_cols=69 Identities=20% Similarity=0.187 Sum_probs=50.9
Q ss_pred CCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC--CCccceeEEEEEeCCeeeEEEEecCCCCHh
Q 009750 83 PNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR--HKRLANLIGYCCDGDERLLVAEYMPNDTLA 158 (527)
Q Consensus 83 ~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lv~E~~~~g~L~ 158 (527)
.+.||+.... .+..+.+|...... ...+..|+..|+.|. .-.+.+++.++.+++..++||++++|.++.
T Consensus 24 ~~~v~r~~~~----~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~ 94 (255)
T d1nd4a_ 24 DAAVFRLSAQ----GRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 94 (255)
T ss_dssp SCEEEEEECT----TSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred CCeEEEEEeC----CCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence 3679998875 45558888765443 335788888888773 333677888888888899999999986653
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.91 E-value=5.1e-05 Score=60.97 Aligned_cols=85 Identities=9% Similarity=-0.057 Sum_probs=74.3
Q ss_pred hhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cC
Q 009750 430 REKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK----LD 501 (527)
Q Consensus 430 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~----~~ 501 (527)
...++++|+.+|++|.+. . ++.+.+++|.+|.. ..++.+|+++|+++.+. .++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~--g-~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhcc--c-chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 456899999999999987 3 67899999999986 56789999999999875 689999999999987 56
Q ss_pred ChHHHHHHHHHHHccccc
Q 009750 502 MHKDAADMLKEAASLEEK 519 (527)
Q Consensus 502 ~~~~A~~~~~~al~l~p~ 519 (527)
++++|+.+|++|.++...
T Consensus 110 d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp CHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHCCCH
Confidence 899999999999987654
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.89 E-value=1.7e-05 Score=67.54 Aligned_cols=62 Identities=6% Similarity=0.064 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 009750 417 DMLEARKRGDVAFREKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQA 479 (527)
Q Consensus 417 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 479 (527)
....+..+|..+...|+|++|+.+++++++++|. +..+|.+++.+|..+|++.+|++.|+++
T Consensus 66 ~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~ 127 (179)
T d2ff4a2 66 KVLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRV 127 (179)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4677888999999999999999999999999999 9999999999999999999999999998
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.77 E-value=7.9e-05 Score=67.40 Aligned_cols=99 Identities=15% Similarity=0.061 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHh----hhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHHhCCCcHH
Q 009750 417 DMLEARKRGDVAFR----EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLM----CDQPDAALRDAMQAQCVYPDWST 488 (527)
Q Consensus 417 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~ai~~~p~~~~ 488 (527)
....++.+|..+.. ..+...+...++.+.+. . +..+.+++|.+|.. ..++++|+.+|.++.+. .++.
T Consensus 141 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~--g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~ 215 (265)
T d1ouva_ 141 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGG 215 (265)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred ccchhhhhhhhhccCCCcccccccchhhhhccccc--c-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHH
Confidence 36667778888875 67788899999999876 3 67999999999997 67999999999999887 5899
Q ss_pred HHHHHHHHHHH----cCChHHHHHHHHHHHcccccc
Q 009750 489 AFYMQAVALAK----LDMHKDAADMLKEAASLEEKR 520 (527)
Q Consensus 489 ~~~~~g~~~~~----~~~~~~A~~~~~~al~l~p~~ 520 (527)
+++++|.+|.. ..++++|+.+|++|.++....
T Consensus 216 a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~ 251 (265)
T d1ouva_ 216 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 251 (265)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCHH
Confidence 99999999986 448999999999999887653
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.56 E-value=0.00017 Score=57.66 Aligned_cols=81 Identities=12% Similarity=0.064 Sum_probs=67.4
Q ss_pred hhhHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCChHHH
Q 009750 431 EKEFKTAVDCYSQFIDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAK----LDMHKDA 506 (527)
Q Consensus 431 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~----~~~~~~A 506 (527)
..|+++|+.+|++|.+.... .+.++++. ....++++|++.++++.+. +++.+++.+|.+|.. ..++++|
T Consensus 6 ~kd~~~A~~~~~kaa~~g~~---~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A 78 (133)
T d1klxa_ 6 KKDLKKAIQYYVKACELNEM---FGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 78 (133)
T ss_dssp HHHHHHHHHHHHHHHHTTCT---THHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCh---hhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHH
Confidence 46899999999999998543 55666664 4557899999999999875 799999999999986 5679999
Q ss_pred HHHHHHHHcccc
Q 009750 507 ADMLKEAASLEE 518 (527)
Q Consensus 507 ~~~~~~al~l~p 518 (527)
+.+|+++.+...
T Consensus 79 ~~~~~~aa~~g~ 90 (133)
T d1klxa_ 79 AQYYSKACGLND 90 (133)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHhhhhccCc
Confidence 999999987653
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.12 E-value=0.0011 Score=61.84 Aligned_cols=97 Identities=15% Similarity=0.065 Sum_probs=58.2
Q ss_pred ccccCHHHHHHHhcCC--CcccccccCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCc
Q 009750 54 FAEFSLADLRAATNNF--SSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKR 131 (527)
Q Consensus 54 ~~~~~~~~~~~~~~~~--~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~n 131 (527)
+..++.+.+..+...+ ..+..+-.|+ +.-..||++... +|..|++|+.+... .+.+++..|...+..|...+
T Consensus 5 f~~L~pd~i~~al~~~g~~~~~~~~~L~-s~EN~vy~v~~~----dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~g 78 (325)
T d1zyla1 5 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE----DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDE 78 (325)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT----TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTT
T ss_pred ccccCHHHHHHHHHHcCCCCCcCccccc-cccceeEEEEcC----CCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcC
Confidence 4455666665555433 2222222233 334589999887 56779999987543 35677889999888884222
Q ss_pred c--ceeE-----EEEEeCCeeeEEEEecCCCC
Q 009750 132 L--ANLI-----GYCCDGDERLLVAEYMPNDT 156 (527)
Q Consensus 132 I--v~l~-----~~~~~~~~~~lv~E~~~~g~ 156 (527)
| +..+ ..+...+..+.++++++|..
T Consensus 79 ipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 79 VPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp CSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred CCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 2 1111 12344667889999998743
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.83 E-value=0.002 Score=61.65 Aligned_cols=77 Identities=16% Similarity=0.193 Sum_probs=52.2
Q ss_pred cccCCCCCCCeEEEEEecCCC----CCceEEEEEEcCcCCCCChHHHHHHHHHhhcCC-CCccceeEEEEEeCCeeeEEE
Q 009750 75 VSESGEKAPNVVYKGRLQDGN----DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLR-HKRLANLIGYCCDGDERLLVA 149 (527)
Q Consensus 75 ~~~lg~G~~g~Vy~~~~~~~~----~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~ 149 (527)
+..|+.|-.-.+|++....+. ...+.|.+++.-. ........+|..+++.+. +.-..++++++.. .+||
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~--~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN--PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS--CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC--cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 567888888999999876531 1235577776642 223445678999999884 4334577777643 6899
Q ss_pred EecCCCCH
Q 009750 150 EYMPNDTL 157 (527)
Q Consensus 150 E~~~~g~L 157 (527)
||++|.+|
T Consensus 121 efi~g~~l 128 (395)
T d1nw1a_ 121 EYIPSRPL 128 (395)
T ss_dssp CCCCEEEC
T ss_pred EEeccccC
Confidence 99987544
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.41 E-value=0.0059 Score=56.24 Aligned_cols=159 Identities=13% Similarity=-0.000 Sum_probs=87.1
Q ss_pred ccCHHHHHHHhcCCCcccccc--cCCCCCCCeEEEEEecCCCCCceEEEEEEcCcCCCCChHHHHHHHHHhhcCCCCcc-
Q 009750 56 EFSLADLRAATNNFSSDFIVS--ESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRL- 132 (527)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~--~lg~G~~g~Vy~~~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~l~~l~H~nI- 132 (527)
..+.+|+......|.-..+.+ .|..|---+.|+.... +|+ +++|+..... +.+++..|+++|..|...++
T Consensus 2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~----~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~p 74 (316)
T d2ppqa1 2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT----KDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLS 74 (316)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES----SCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEEC----CCc-EEEEEcCCCC--CHHHHHHHHHHHHhhhhcccc
Confidence 357788888888876544433 3556766788998875 333 8899886532 34567778888888843221
Q ss_pred -ceeEE------EEEeCCeeeEEEEecCCCCHhHHh--------------hhc----C---CCC----------------
Q 009750 133 -ANLIG------YCCDGDERLLVAEYMPNDTLAKHL--------------FHW----E---NQT---------------- 168 (527)
Q Consensus 133 -v~l~~------~~~~~~~~~lv~E~~~~g~L~~~l--------------~~~----~---~~~---------------- 168 (527)
...+- +.........++.++.+......- +.. . ...
T Consensus 75 vp~pi~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (316)
T d2ppqa1 75 CPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEER 154 (316)
T ss_dssp CCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGG
T ss_pred ccccceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHh
Confidence 11110 122244566777777664332100 000 0 000
Q ss_pred --cCHHHHHHHHHHHHHHHHHhhh----CCCccccccCCCceEeCCCCCceeecccCccc
Q 009750 169 --IEWAMRLRVALYIAEALDYCSS----EGRPLYHDLNAYRVLFDENGDPRLSCFGLMKN 222 (527)
Q Consensus 169 --l~~~~~~~i~~~i~~aL~~lH~----~~~ivH~Dlkp~NIll~~~~~~kl~DFG~a~~ 222 (527)
.........+..+...+.-.+. .+ +||+|+.+.||+++.+...-|.||+.+..
T Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~~~~L~~g-iIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 155 ADEVEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp GGGTSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhcchhHHHHHHHHHHhhhccCccccccc-cccCCcchhhhhcccccceeEeccccccc
Confidence 0001112222333333333332 24 89999999999999888778999998643
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.84 E-value=0.75 Score=32.86 Aligned_cols=32 Identities=25% Similarity=0.356 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhc
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFIDV 447 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 447 (527)
..+..+..+|..+-..|+|++|+.+|.+||+.
T Consensus 13 ~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie~ 44 (93)
T d1wfda_ 13 TAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45777888889999999999999999988764
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=81.27 E-value=1.1 Score=30.47 Aligned_cols=31 Identities=13% Similarity=0.279 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Q 009750 416 RDMLEARKRGDVAFREKEFKTAVDCYSQFID 446 (527)
Q Consensus 416 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 446 (527)
+.+-.+-.+|..+.+.|+|++||+++++|.+
T Consensus 6 N~AH~~~RrAer~l~~~rydeAIech~kA~~ 36 (83)
T d2crba1 6 NLAHQQSRRADRLLAAGKYEEAISCHRKATT 36 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4466667788889999999999998877653
|