Query 009753
Match_columns 526
No_of_seqs 284 out of 1760
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 16:55:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009753.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009753hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03552 Cellulose_synt: Cellu 100.0 9E-130 2E-134 1060.9 27.1 516 1-525 109-705 (720)
2 PLN02893 Cellulose synthase-li 100.0 3E-127 6E-132 1049.1 45.8 521 1-525 203-730 (734)
3 PLN02400 cellulose synthase 100.0 5E-127 1E-131 1068.6 33.8 515 1-525 466-1063(1085)
4 PLN02436 cellulose synthase A 100.0 2E-126 5E-131 1058.8 38.8 514 1-525 475-1073(1094)
5 PLN02638 cellulose synthase A 100.0 8E-127 2E-131 1066.1 34.4 515 1-525 459-1058(1079)
6 PLN02189 cellulose synthase 100.0 3E-126 6E-131 1059.4 36.4 514 1-525 441-1019(1040)
7 PLN02195 cellulose synthase A 100.0 2E-125 4E-130 1047.5 39.0 514 1-525 362-954 (977)
8 PLN02915 cellulose synthase A 100.0 9E-124 2E-128 1039.2 38.9 516 1-525 397-1023(1044)
9 PLN02248 cellulose synthase-li 100.0 6E-123 1E-127 1034.0 36.9 503 15-526 522-1118(1135)
10 PLN02190 cellulose synthase-li 100.0 1E-121 3E-126 999.3 34.8 506 1-525 200-756 (756)
11 PRK11498 bcsA cellulose syntha 100.0 9.2E-61 2E-65 539.4 41.5 391 32-504 283-684 (852)
12 TIGR03030 CelA cellulose synth 100.0 2.8E-59 6E-64 528.1 42.4 392 32-506 154-573 (713)
13 PRK05454 glucosyltransferase M 100.0 6.8E-32 1.5E-36 301.6 39.2 248 34-336 153-420 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 2.5E-33 5.3E-38 280.5 21.1 207 34-289 28-253 (254)
15 PRK14583 hmsR N-glycosyltransf 100.0 3.9E-30 8.4E-35 277.0 31.7 203 32-295 97-308 (444)
16 COG1215 Glycosyltransferases, 100.0 3.6E-30 7.7E-35 274.7 23.9 206 30-293 75-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 5.8E-29 1.3E-33 265.4 32.8 202 32-295 76-287 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 1.5E-27 3.3E-32 256.5 29.8 251 32-345 71-342 (439)
19 PRK14716 bacteriophage N4 adso 100.0 1.3E-26 2.8E-31 251.3 30.5 235 33-318 90-355 (504)
20 PRK11234 nfrB bacteriophage N4 99.9 2.6E-25 5.6E-30 250.0 25.4 209 34-293 88-335 (727)
21 cd06437 CESA_CaSu_A2 Cellulose 99.9 2.2E-25 4.8E-30 218.1 17.9 194 33-287 24-232 (232)
22 cd06421 CESA_CelA_like CESA_Ce 99.9 4.2E-25 9.2E-30 214.7 18.4 200 32-290 24-233 (234)
23 cd06435 CESA_NdvC_like NdvC_li 99.9 1.4E-24 3E-29 212.4 19.7 205 32-294 21-235 (236)
24 cd06427 CESA_like_2 CESA_like_ 99.9 2.6E-24 5.7E-29 212.3 19.7 204 32-294 23-237 (241)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 2.3E-24 5E-29 209.5 5.4 194 34-286 25-228 (228)
26 PRK15489 nfrB bacteriophage N4 99.9 7.6E-21 1.6E-25 211.9 29.2 211 33-291 95-341 (703)
27 TIGR03472 HpnI hopanoid biosyn 99.9 2.9E-20 6.3E-25 196.0 26.2 197 32-288 63-273 (373)
28 cd04190 Chitin_synth_C C-termi 99.9 8.4E-22 1.8E-26 195.6 12.7 197 32-288 20-242 (244)
29 cd04192 GT_2_like_e Subfamily 99.9 7.4E-21 1.6E-25 183.8 17.9 197 32-286 19-229 (229)
30 cd06434 GT2_HAS Hyaluronan syn 99.8 1.5E-20 3.3E-25 183.3 16.0 202 34-288 25-233 (235)
31 cd02520 Glucosylceramide_synth 99.8 9.5E-21 2.1E-25 181.1 14.2 164 33-286 24-195 (196)
32 PF13632 Glyco_trans_2_3: Glyc 99.8 1.1E-19 2.3E-24 172.9 16.4 137 98-287 1-143 (193)
33 COG2943 MdoH Membrane glycosyl 99.8 2.1E-17 4.6E-22 173.2 31.1 242 37-333 178-436 (736)
34 cd06439 CESA_like_1 CESA_like_ 99.8 2.7E-18 5.9E-23 169.4 17.8 190 34-289 53-250 (251)
35 cd02525 Succinoglycan_BP_ExoA 99.7 3.5E-17 7.6E-22 160.1 17.0 197 34-294 24-234 (249)
36 TIGR03469 HonB hopene-associat 99.7 4.2E-16 9E-21 165.2 22.3 200 32-285 62-280 (384)
37 cd06436 GlcNAc-1-P_transferase 99.7 2.8E-16 6.2E-21 149.9 14.7 140 38-185 25-177 (191)
38 PF13506 Glyco_transf_21: Glyc 99.7 1.6E-15 3.4E-20 143.8 14.0 154 76-285 15-175 (175)
39 cd06438 EpsO_like EpsO protein 99.6 5.7E-15 1.2E-19 139.5 11.1 140 34-185 21-169 (183)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.5 1.2E-13 2.7E-18 131.3 13.0 164 34-261 24-196 (201)
41 cd04184 GT2_RfbC_Mx_like Myxoc 99.5 3.8E-13 8.2E-18 127.8 13.5 161 34-261 26-196 (202)
42 cd02510 pp-GalNAc-T pp-GalNAc- 99.4 3E-12 6.4E-17 130.7 16.0 163 39-261 31-220 (299)
43 cd06433 GT_2_WfgS_like WfgS an 99.4 2E-12 4.3E-17 121.6 12.6 165 34-261 22-189 (202)
44 cd04186 GT_2_like_c Subfamily 99.4 3.2E-12 7E-17 116.5 13.2 133 38-261 26-160 (166)
45 cd02526 GT2_RfbF_like RfbF is 99.4 1.9E-12 4.2E-17 126.3 11.2 169 38-261 24-199 (237)
46 cd06442 DPM1_like DPM1_like re 99.4 1.5E-11 3.2E-16 118.8 16.3 166 37-260 26-197 (224)
47 cd02522 GT_2_like_a GT_2_like_ 99.4 1.7E-11 3.7E-16 118.1 15.5 151 38-257 28-178 (221)
48 PLN02726 dolichyl-phosphate be 99.3 4.7E-11 1E-15 118.2 15.5 165 38-260 40-212 (243)
49 cd06420 GT2_Chondriotin_Pol_N 99.3 4.8E-11 1E-15 111.5 14.2 142 38-260 26-174 (182)
50 TIGR01556 rhamnosyltran L-rham 99.3 3.5E-11 7.6E-16 121.5 12.8 168 39-261 22-196 (281)
51 cd04185 GT_2_like_b Subfamily 99.3 9.9E-11 2.1E-15 111.6 14.4 142 34-261 21-168 (202)
52 cd04196 GT_2_like_d Subfamily 99.3 5.7E-11 1.2E-15 113.4 12.6 169 34-261 22-198 (214)
53 cd06913 beta3GnTL1_like Beta 1 99.2 3.3E-10 7.1E-15 109.8 16.1 175 34-262 21-205 (219)
54 cd04188 DPG_synthase DPG_synth 99.2 5.3E-10 1.2E-14 107.7 14.7 165 37-260 29-202 (211)
55 cd06423 CESA_like CESA_like is 99.1 6.2E-11 1.3E-15 107.4 6.6 134 38-185 26-168 (180)
56 PF03142 Chitin_synth_2: Chiti 99.1 2.1E-09 4.5E-14 117.1 19.1 168 95-291 201-378 (527)
57 PF10111 Glyco_tranf_2_2: Glyc 99.1 2.1E-09 4.6E-14 109.2 14.8 174 36-261 32-217 (281)
58 PF00535 Glycos_transf_2: Glyc 99.1 2.1E-10 4.5E-15 103.9 5.9 138 36-185 25-167 (169)
59 cd04179 DPM_DPG-synthase_like 99.0 1.8E-09 3.9E-14 100.9 10.2 135 37-185 27-165 (185)
60 PRK10073 putative glycosyl tra 99.0 4.8E-09 1E-13 109.1 13.7 199 33-291 29-243 (328)
61 PRK10063 putative glycosyl tra 98.9 2.7E-08 5.8E-13 99.5 15.7 158 38-263 33-193 (248)
62 cd04187 DPM1_like_bac Bacteria 98.9 1.1E-08 2.5E-13 95.8 11.9 129 38-185 29-161 (181)
63 KOG2571 Chitin synthase/hyalur 98.9 2.5E-08 5.4E-13 112.5 15.9 166 78-286 425-596 (862)
64 PRK10018 putative glycosyl tra 98.9 6.3E-08 1.4E-12 98.6 15.9 194 32-294 27-231 (279)
65 COG1216 Predicted glycosyltran 98.8 1.8E-08 3.9E-13 103.5 10.7 173 33-261 26-215 (305)
66 cd00761 Glyco_tranf_GTA_type G 98.8 5.7E-08 1.2E-12 85.7 11.9 86 38-136 26-114 (156)
67 PTZ00260 dolichyl-phosphate be 98.7 4.8E-07 1E-11 94.4 15.6 88 38-136 107-201 (333)
68 PRK10714 undecaprenyl phosphat 98.4 1.4E-05 3E-10 83.2 17.7 75 38-122 38-116 (325)
69 PRK13915 putative glucosyl-3-p 98.2 4.4E-06 9.5E-11 86.2 9.0 88 37-135 61-152 (306)
70 KOG2547 Ceramide glucosyltrans 98.1 2.7E-06 5.9E-11 87.4 3.8 198 27-285 103-314 (431)
71 cd02511 Beta4Glucosyltransfera 97.7 0.00012 2.5E-09 71.9 8.8 73 39-124 27-99 (229)
72 KOG2978 Dolichol-phosphate man 97.4 0.0018 4E-08 61.3 11.2 131 38-185 35-175 (238)
73 COG0463 WcaA Glycosyltransfera 97.0 0.0028 6E-08 57.2 7.7 74 32-115 25-102 (291)
74 cd02514 GT13_GLCNAC-TI GT13_GL 96.2 0.038 8.1E-07 57.8 11.0 126 38-185 31-173 (334)
75 PF02364 Glucan_synthase: 1,3- 95.6 0.53 1.2E-05 54.2 17.5 188 77-315 274-483 (817)
76 PF13704 Glyco_tranf_2_4: Glyc 93.5 0.2 4.2E-06 42.1 6.0 65 39-108 20-84 (97)
77 KOG2977 Glycosyltransferase [G 93.2 0.37 8E-06 48.9 8.1 77 37-122 103-186 (323)
78 cd00899 b4GalT Beta-4-Galactos 92.3 0.26 5.7E-06 48.5 5.7 158 59-290 32-199 (219)
79 PF13712 Glyco_tranf_2_5: Glyc 88.1 0.86 1.9E-05 44.7 5.4 58 63-133 31-89 (217)
80 COG4092 Predicted glycosyltran 82.7 12 0.00026 38.0 10.2 108 35-145 35-144 (346)
81 KOG3736 Polypeptide N-acetylga 80.6 1.4 2.9E-05 49.4 3.3 175 40-275 176-380 (578)
82 PF02709 Glyco_transf_7C: N-te 79.0 2 4.2E-05 35.3 2.9 31 231-261 35-68 (78)
83 PRK09382 ispDF bifunctional 2- 75.4 20 0.00043 38.3 10.1 41 79-123 83-123 (378)
84 KOG0916 1,3-beta-glucan syntha 72.4 1.5E+02 0.0033 36.8 16.8 170 76-294 1049-1228(1679)
85 PF02434 Fringe: Fringe-like; 70.9 13 0.00027 37.4 7.0 27 94-121 85-111 (252)
86 PF13896 Glyco_transf_49: Glyc 70.3 6.1 0.00013 41.1 4.7 45 84-133 120-164 (317)
87 KOG3737 Predicted polypeptide 68.1 3.7 8.1E-05 43.5 2.5 69 39-119 188-263 (603)
88 cd02540 GT2_GlmU_N_bac N-termi 58.5 1E+02 0.0023 29.4 10.7 54 62-123 63-117 (229)
89 TIGR03310 matur_ygfJ molybdenu 58.2 59 0.0013 30.1 8.6 54 62-123 63-117 (188)
90 PLN03153 hypothetical protein; 55.6 54 0.0012 36.4 8.6 30 93-124 208-237 (537)
91 cd04182 GT_2_like_f GT_2_like_ 55.0 79 0.0017 28.9 8.8 43 77-122 74-117 (186)
92 cd04181 NTP_transferase NTP_tr 46.8 1.2E+02 0.0026 28.5 8.9 42 77-124 81-122 (217)
93 PF01762 Galactosyl_T: Galacto 45.4 47 0.001 31.5 5.8 58 59-121 47-105 (195)
94 cd06915 NTP_transferase_WcbM_l 44.0 1.7E+02 0.0037 27.5 9.5 73 40-123 46-121 (223)
95 cd02503 MobA MobA catalyzes th 39.5 2.8E+02 0.0061 25.3 10.0 42 76-121 68-109 (181)
96 TIGR01173 glmU UDP-N-acetylglu 37.9 2.1E+02 0.0046 30.6 10.0 73 40-123 45-118 (451)
97 KOG3738 Predicted polypeptide 37.6 63 0.0014 34.7 5.5 73 39-122 157-230 (559)
98 COG4858 Uncharacterized membra 37.0 1.3E+02 0.0029 28.9 7.1 57 449-507 102-160 (226)
99 TIGR02665 molyb_mobA molybdopt 35.3 90 0.0019 28.9 5.9 42 76-122 72-114 (186)
100 PRK00317 mobA molybdopterin-gu 35.0 86 0.0019 29.4 5.7 42 77-123 74-116 (193)
101 KOG3588 Chondroitin synthase 1 34.8 3.5E+02 0.0077 29.0 10.3 143 56-260 282-431 (494)
102 PF05679 CHGN: Chondroitin N-a 33.6 1.3E+02 0.0029 33.3 7.7 55 55-117 306-362 (499)
103 PF01128 IspD: 2-C-methyl-D-er 31.9 1.8E+02 0.004 28.6 7.6 72 40-123 47-119 (221)
104 PLN02728 2-C-methyl-D-erythrit 31.5 1.5E+02 0.0032 29.8 7.0 42 79-122 103-144 (252)
105 PRK02726 molybdopterin-guanine 31.2 2.5E+02 0.0054 26.7 8.3 43 77-123 78-120 (200)
106 PF12804 NTP_transf_3: MobA-li 30.3 3.9E+02 0.0085 23.7 10.3 65 63-137 60-125 (160)
107 PRK14503 mannosyl-3-phosphogly 29.9 61 0.0013 34.4 3.9 44 76-122 142-185 (393)
108 TIGR02460 osmo_MPGsynth mannos 29.7 63 0.0014 34.1 3.9 44 76-122 141-184 (381)
109 cd02509 GDP-M1P_Guanylyltransf 29.0 1.9E+02 0.0041 29.1 7.4 54 60-118 72-125 (274)
110 PRK14353 glmU bifunctional N-a 28.7 2.5E+02 0.0054 30.1 8.7 43 77-122 82-125 (446)
111 PF04724 Glyco_transf_17: Glyc 28.7 1.1E+02 0.0023 32.6 5.6 55 61-117 138-199 (356)
112 KOG4440 NMDA selective glutama 26.7 1.6E+02 0.0035 33.5 6.5 79 386-490 572-656 (993)
113 cd06422 NTP_transferase_like_1 26.4 3.9E+02 0.0085 25.3 8.9 40 77-122 82-121 (221)
114 PF09488 Osmo_MPGsynth: Mannos 26.1 1E+02 0.0022 32.7 4.7 43 76-121 141-183 (381)
115 PF00483 NTP_transferase: Nucl 25.5 1.9E+02 0.004 28.0 6.5 77 41-124 50-129 (248)
116 PRK14357 glmU bifunctional N-a 24.9 4.6E+02 0.01 28.1 9.9 52 63-123 64-116 (448)
117 PRK14355 glmU bifunctional N-a 24.8 5.7E+02 0.012 27.6 10.7 54 62-123 69-123 (459)
118 cd02523 PC_cytidylyltransferas 23.7 3E+02 0.0065 26.3 7.5 68 40-117 46-113 (229)
119 PF11316 Rhamno_transf: Putati 23.2 5.9E+02 0.013 25.3 9.5 76 40-123 60-141 (234)
120 TIGR03584 PseF pseudaminic aci 22.2 7.2E+02 0.016 24.1 10.1 59 76-134 75-133 (222)
121 PRK14354 glmU bifunctional N-a 20.7 7.5E+02 0.016 26.5 10.6 44 77-123 76-120 (458)
122 PHA02688 ORF059 IMV protein VP 20.2 1.6E+02 0.0035 30.6 4.8 45 95-143 116-160 (323)
No 1
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=8.8e-130 Score=1060.93 Aligned_cols=516 Identities=43% Similarity=0.768 Sum_probs=479.1
Q ss_pred ChhhHHHHHhc-CCCChhHhhhcCCcccccCccccCCCCceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCc
Q 009753 1 MKTRIELAIAK-GSISKETRNQHKGFSEWNCKVTKQDHQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFK 79 (526)
Q Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~K 79 (526)
||+|||.++++ +++|+++|.|++|. +|+ +++++|||++|||+.|+++++ |.+|+++|+++||+|||||+++||+|
T Consensus 109 ~k~ri~~~~~~~~~~~~~~~~~~~~~-~w~-~~~~~dH~~iiqv~~~~~~~~--~~~g~~lP~lvYvsREKrp~~~Hh~K 184 (720)
T PF03552_consen 109 FKVRIEALVAKIQKVPEEGWTMQDGT-PWP-GNTRRDHPGIIQVLLDNPGGK--DVDGNELPMLVYVSREKRPGYPHHFK 184 (720)
T ss_pred HHHHHHHHhhhhhcccccceeccCCC-cCC-CCCCcCChhheEeeccCCCCc--ccccCcCCeEEEEeccCCCCCCchhh
Confidence 68999998754 78999999999996 999 589999999999999988765 67889999999999999999999999
Q ss_pred HHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHH
Q 009753 80 AGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVE 159 (526)
Q Consensus 80 AGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 159 (526)
|||||+++|+|+++||+|||+++||||++|||+.++++||||+||+.++++||||+||+|+|+++||+|+|++.+||++.
T Consensus 185 AGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~~~~~~ 264 (720)
T PF03552_consen 185 AGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRVFFDIN 264 (720)
T ss_pred hcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCccceeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCeeeeccceeEehhhhcCCCCCcccc------------------------c------------------c-c
Q 009753 160 LAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYR------------------------N------------------I-N 196 (526)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~------------------------~------------------~-~ 196 (526)
++|+||++||+|+||||+|||+||+|..+....+ + + +
T Consensus 265 ~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (720)
T PF03552_consen 265 MRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFALEDIE 344 (720)
T ss_pred ccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccccchhccccccccccccccccccc
Confidence 9999999999999999999999999985411000 0 0 0
Q ss_pred c------------------------------------ccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccc
Q 009753 197 E------------------------------------AKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAE 240 (526)
Q Consensus 197 ~------------------------------------~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtE 240 (526)
+ ...+++.+++++++||++|+||.||++|+||+++||.|+|+||
T Consensus 345 ~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~EA~~V~sC~YE~~T~WGkevGwiYGSvtE 424 (720)
T PF03552_consen 345 EGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEEAIHVASCGYEDKTEWGKEVGWIYGSVTE 424 (720)
T ss_pred cccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcCCccccCCcccccceEEEeccc
Confidence 0 0114566789999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccc-cCCcchhhhhhhhhhhhh
Q 009753 241 DVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG-HGKIKFGAQMGYCNYLLW 319 (526)
Q Consensus 241 D~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~ 319 (526)
|+.||++||++||||+||+|++++|.|.||+|+.+.+.|++||+.|++||+++|+||+++| .++|+++||++|++.++|
T Consensus 425 Dv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~y 504 (720)
T PF03552_consen 425 DVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYLNYMLY 504 (720)
T ss_pred ccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999987 689999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccccchhhHHHHHHHHHHHHH
Q 009753 320 APLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGF 399 (526)
Q Consensus 320 ~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~~~l~~~~~G~~~~~ww~~~~~w~i~~~~~~~~~~ 399 (526)
+++|+|.++|+++|++||++|++++|+.+.+++++|+++++++++++++|++|+|.++++|||+||||+|.++++|++|+
T Consensus 505 pl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~LfAv 584 (720)
T PF03552_consen 505 PLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHLFAV 584 (720)
T ss_pred HHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHHHHH
Confidence 99999999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHH
Q 009753 400 VDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQI 479 (526)
Q Consensus 400 ~~~~~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~~~~~~l 479 (526)
+++++|++|+++++|+||+|..+++..+. .+.|.|+ ++++++|.++++++|++|+++|+++.+.++..+|+++++++
T Consensus 585 l~~iLK~lg~s~t~F~VTsK~~dde~~~~--~ely~f~-wS~LfiP~tTllilNLva~v~Gi~r~i~~g~~~~g~l~g~l 661 (720)
T PF03552_consen 585 LQGILKVLGGSETSFTVTSKVSDDEDDKY--AELYIFK-WSPLFIPPTTLLILNLVAFVVGISRAINSGYGSWGPLLGQL 661 (720)
T ss_pred HHHHHHHHcCCccceeecccccccccccc--ccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Confidence 99999999999999999999987544443 3456665 47899999999999999999999999987778899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccC
Q 009753 480 ILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 525 (526)
Q Consensus 480 ~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~v~~~s~~~~~~~~~~~~ 525 (526)
++++|+++++|||++||++||+ |+|+++++||+++++++|++|+
T Consensus 662 f~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv 705 (720)
T PF03552_consen 662 FFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWV 705 (720)
T ss_pred HHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHhe
Confidence 9999999999999999999976 5999999999999999999986
No 2
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=2.8e-127 Score=1049.07 Aligned_cols=521 Identities=38% Similarity=0.734 Sum_probs=485.6
Q ss_pred ChhhHHHHHhcCCCChhH---hhhcCCcccccCccccCCCCceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCC
Q 009753 1 MKTRIELAIAKGSISKET---RNQHKGFSEWNCKVTKQDHQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHN 77 (526)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~ 77 (526)
||+|||++++++++|+|. +.++++|++|++++.++|||++|||+.|++++. |.+|.++|+++|++|||||+++||
T Consensus 203 ~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~~--d~~g~~lP~lvYvsReKrp~~~Hh 280 (734)
T PLN02893 203 MKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDK--DITGHTMPNLIYVSREKSKNSPHH 280 (734)
T ss_pred HHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCcc--chhhccCCceEEEeCCCCCCCCcc
Confidence 799999999999999885 556789999998999999999999999998764 556778999999999999999999
Q ss_pred CcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHH
Q 009753 78 FKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQ 157 (526)
Q Consensus 78 ~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~ 157 (526)
+||||||+++|+|+.+||||||+||||||++|+|++++++||||+||+.++++|+||+||+|+|.+++|+|++++++||+
T Consensus 281 ~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~ 360 (734)
T PLN02893 281 FKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQ 360 (734)
T ss_pred cccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHH
Confidence 99999999999999999999999999999998999999999999999889999999999999999999999999999999
Q ss_pred HHHHHHhhcCCeeeeccceeEehhhhcCCCCC--cccccc--ccccCCCCcChHHHHHhhchhccccccccCccccccCC
Q 009753 158 VELAGIGSYDAALYCGTGCFHRRESLSGAKYP--KDYRNI--NEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGL 233 (526)
Q Consensus 158 ~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~ 233 (526)
++++|+||++||+||||||+|||+||+|.... .+..++ ......+++..++++++|++|+||.||++|.||+++||
T Consensus 361 ~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~ 440 (734)
T PLN02893 361 INMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGF 440 (734)
T ss_pred HHhhcccccCCceeeccceEEEHHHhcCCCccccchhhhhcccccccccccchHHHHHHhhhccccccccCCccccccce
Confidence 99999999999999999999999999987431 000100 00112345678899999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccccCCcchhhhhhh
Q 009753 234 VYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGY 313 (526)
Q Consensus 234 ~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y 313 (526)
.|+|+|||++||++||++||||+||+++++++.|++|+|+.++++||+||++|++||+++++||+++|.++|++.||++|
T Consensus 441 ~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y 520 (734)
T PLN02893 441 RYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGY 520 (734)
T ss_pred EeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHH
Confidence 99999999999999999999999999877889999999999999999999999999999999999987789999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccccchhhHHHHHHH
Q 009753 314 CNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTT 393 (526)
Q Consensus 314 ~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~~~l~~~~~G~~~~~ww~~~~~w~i~~~~ 393 (526)
++.++||++++|+++|+++|++||++|++++|+.+.+|+++|++++++.++++++|++++|.++++|||+||+|+|.+++
T Consensus 521 ~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~s 600 (734)
T PLN02893 521 AHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLS 600 (734)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHH
Confidence 99999999999999999999999999999999988899999998889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchh
Q 009753 394 AFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALG 473 (526)
Q Consensus 394 ~~~~~~~~~~~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~ 473 (526)
+++++++++++|++|+++.+|+||+|+.+++.+++|++|.|+|+.++|+++|+++++++|++|+++|+++++.+ +.++
T Consensus 601 s~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~--~~~~ 678 (734)
T PLN02893 601 SFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQ--RNLE 678 (734)
T ss_pred HHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhC--Cchh
Confidence 99999999999999999999999999987777889999999999889999999999999999999999999875 4578
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccC
Q 009753 474 NLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 525 (526)
Q Consensus 474 ~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~v~~~s~~~~~~~~~~~~ 525 (526)
.++++++|++|+|++++||++||+.|||||++|++++++|++|++++|+++.
T Consensus 679 ~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~ 730 (734)
T PLN02893 679 GLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLASS 730 (734)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999999999999999999999998764
No 3
>PLN02400 cellulose synthase
Probab=100.00 E-value=4.5e-127 Score=1068.60 Aligned_cols=515 Identities=33% Similarity=0.598 Sum_probs=475.7
Q ss_pred ChhhHHHHH-hcCCCChhHhhhcCCcccccCccccCCCCceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCc
Q 009753 1 MKTRIELAI-AKGSISKETRNQHKGFSEWNCKVTKQDHQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFK 79 (526)
Q Consensus 1 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~K 79 (526)
||+|||+++ +++++|+++|.|+++. +|++ .+++|||++|||+.|++++. |.+|.++|+++||+|||||+++||+|
T Consensus 466 ~k~RIe~l~~~~~~~~~~~~~m~dgt-~W~g-~~~~dHp~iIqVll~~~~~~--d~~g~~LP~LVYVSREKRP~~~Hh~K 541 (1085)
T PLN02400 466 FKVRINALVAKAQKIPEEGWTMQDGT-PWPG-NNPRDHPGMIQVFLGHSGGL--DTDGNELPRLVYVSREKRPGFQHHKK 541 (1085)
T ss_pred HHHHHHHHHhhhccCCccccccccCc-cCCC-CCCCCCchhhhhhhcCCCCc--ccccccCceeEEEeccCCCCCCcchh
Confidence 699999998 7799999998777765 9995 68999999999999998753 45778899999999999999999999
Q ss_pred HHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHH
Q 009753 80 AGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVE 159 (526)
Q Consensus 80 AGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 159 (526)
|||||+++|+|++|||+|||++||||||+|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.
T Consensus 542 AGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~ 621 (1085)
T PLN02400 542 AGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDIN 621 (1085)
T ss_pred hhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCeeeeccceeEehhhhcCCCC--Cccc-------------------------------cc-----------c
Q 009753 160 LAGIGSYDAALYCGTGCFHRRESLSGAKY--PKDY-------------------------------RN-----------I 195 (526)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~--~~~~-------------------------------~~-----------~ 195 (526)
++|+||+|||+|+||||+|||+||+|..+ ++++ +. +
T Consensus 622 ~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (1085)
T PLN02400 622 LKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMED 701 (1085)
T ss_pred ccccccCCCccccccCcceeeeeeccCCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999733 1000 00 0
Q ss_pred --c----cc-------------------------------cCCCCcChHHHHHhhchhccccccccCccccccCCCCCCc
Q 009753 196 --N----EA-------------------------------KNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCA 238 (526)
Q Consensus 196 --~----~~-------------------------------~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~sv 238 (526)
+ .+ ..+.+.+.++++++|++|+||+||++|.||+++||.|+|+
T Consensus 702 ~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSv 781 (1085)
T PLN02400 702 IEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSV 781 (1085)
T ss_pred cccccccccchhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccce
Confidence 0 00 0123446788999999999999999999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccc-cCCcchhhhhhhhhhh
Q 009753 239 AEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG-HGKIKFGAQMGYCNYL 317 (526)
Q Consensus 239 tED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~ 317 (526)
|||+.||++||++||||+||+|++++|.|+||+|+.++++||+||++|++||+++++||+++| .++|+++||++|++++
T Consensus 782 TED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~ 861 (1085)
T PLN02400 782 TEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTI 861 (1085)
T ss_pred echHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999999888899999999999999999999999999999999999876 4899999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccccchhhHHHHHHHHHHH
Q 009753 318 LWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFF 397 (526)
Q Consensus 318 ~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~~~l~~~~~G~~~~~ww~~~~~w~i~~~~~~~~ 397 (526)
+||++++|+++|+++|++||++|++++|..+.+++++|+++++++++++++|++|+|.++++|||+||||+|.++++++|
T Consensus 862 ~y~~~slp~liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lf 941 (1085)
T PLN02400 862 VYPITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLF 941 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHH
Confidence 99999999999999999999999999998888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHH
Q 009753 398 GFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMC 477 (526)
Q Consensus 398 ~~~~~~~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~~~~~ 477 (526)
+++++++|+||+++++|.||+|..+++.. .+|+|+|+ ++++++|+++++++|++|+++|+++.+.++++.|+.+++
T Consensus 942 avl~~ilKvLgg~~~~F~VTsK~~d~~~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~ 1017 (1085)
T PLN02400 942 AVFQGLLKVLAGIDTNFTVTSKASDEDGD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFG 1017 (1085)
T ss_pred HHHHHHHHHhcCCcccceecCCccccccc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHH
Confidence 99999999999999999999998764321 36788998 789999999999999999999999998866778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccC
Q 009753 478 QIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 525 (526)
Q Consensus 478 ~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~v~~~s~~~~~~~~~~~~ 525 (526)
++++++|+|+++|||++||++|+ +|+|++|++||++++++++++|+
T Consensus 1018 ~~~~~~wvvv~l~Pf~kgL~gR~--~r~P~~v~~~s~lla~~~~l~~v 1063 (1085)
T PLN02400 1018 KLFFAIWVIAHLYPFLKGLLGRQ--NRTPTIVIVWSILLASIFSLLWV 1063 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC--CCCceeHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999887 68999999999999999999997
No 4
>PLN02436 cellulose synthase A
Probab=100.00 E-value=2.3e-126 Score=1058.77 Aligned_cols=514 Identities=33% Similarity=0.642 Sum_probs=473.0
Q ss_pred ChhhHHHHHhc-CCCChhHhhhcCCcccccCccccCCCCceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCc
Q 009753 1 MKTRIELAIAK-GSISKETRNQHKGFSEWNCKVTKQDHQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFK 79 (526)
Q Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~K 79 (526)
||+|||+++++ +++|+|+|.|++|. +|++ .+++|||++|||+.|++++. +.+|.++|+++||+|||||+++||+|
T Consensus 475 ~K~RIe~l~~~~~~vp~~~~~m~dgt-~W~g-~~~~dHp~IIqVll~~~~~~--d~~g~~LP~LVYVSREKRPg~~Hh~K 550 (1094)
T PLN02436 475 FKVKINALVATAQKVPEDGWTMQDGT-PWPG-NNVRDHPGMIQVFLGHSGVR--DVEGNELPRLVYVSREKRPGFDHHKK 550 (1094)
T ss_pred HHHHHHHHHhhcccCchhhhhhccCc-cCCC-CCCCCCccceEEEecCCCCc--ccccccCceEEEEecccCCCCCcchh
Confidence 69999999976 99999998888886 9995 68999999999999998653 56778899999999999999999999
Q ss_pred HHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHH
Q 009753 80 AGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVE 159 (526)
Q Consensus 80 AGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 159 (526)
|||||+++|+|++|||+|||++||||||+|||++++++||||+||+.++++||||+||+|+|+++||+|+|++++||++.
T Consensus 551 AGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~ 630 (1094)
T PLN02436 551 AGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDIN 630 (1094)
T ss_pred hhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCeeeeccceeEehhhhcCCCCCccccc---------------------------------------------
Q 009753 160 LAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRN--------------------------------------------- 194 (526)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~--------------------------------------------- 194 (526)
++|+||+|||+|+||||+|||+||+|..+.++.+.
T Consensus 631 ~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1094)
T PLN02436 631 MKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHAL 710 (1094)
T ss_pred ccccccCCCccccccCceeeeeeeeccCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999743211000
Q ss_pred -c-c---------cc---------------------------cCCCCcChHHHHHhhchhccccccccCccccccCCCCC
Q 009753 195 -I-N---------EA---------------------------KNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG 236 (526)
Q Consensus 195 -~-~---------~~---------------------------~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~ 236 (526)
+ + .+ ..+.+.+.++++++|++|+||+||++|.||+++||.|+
T Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYG 790 (1094)
T PLN02436 711 ENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYG 790 (1094)
T ss_pred cccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeecc
Confidence 0 0 00 00223467789999999999999999999999999999
Q ss_pred CccchHHHHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccc-cCCcchhhhhhhhh
Q 009753 237 CAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG-HGKIKFGAQMGYCN 315 (526)
Q Consensus 237 svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~ 315 (526)
|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++||++++++|+++| .++|+++||++|++
T Consensus 791 SvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~ 870 (1094)
T PLN02436 791 SVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYIN 870 (1094)
T ss_pred ceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHH
Confidence 99999999999999999999998888899999999999999999999999999999999999976 46899999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccccchhhHHHHHHHHH
Q 009753 316 YLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAF 395 (526)
Q Consensus 316 ~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~~~l~~~~~G~~~~~ww~~~~~w~i~~~~~~ 395 (526)
+++||++++|.++|+++|++||++|++++|..+.+++++|+++++++++++++|++|+|.++++|||+||||+|.+++++
T Consensus 871 ~~ly~l~Slp~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~ 950 (1094)
T PLN02436 871 SVVYPWTSIPLIVYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSH 950 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999988888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHH
Q 009753 396 FFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNL 475 (526)
Q Consensus 396 ~~~~~~~~~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~~~ 475 (526)
+|+++++++|+|++++++|.||+|..+++. ..+.|+|+ ++++++|+++++++|++|+++|+.+.+.++++.|+.+
T Consensus 951 Lfavl~~iLKvLggs~~~F~VTsK~~d~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l 1025 (1094)
T PLN02436 951 LFALFQGLLKVLAGVNTNFTVTSKAADDGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPL 1025 (1094)
T ss_pred HHHHHHHHHHHhccCcccceeccccccccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHH
Confidence 999999999999999999999999876431 23456787 6899999999999999999999999998767789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccC
Q 009753 476 MCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 525 (526)
Q Consensus 476 ~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~v~~~s~~~~~~~~~~~~ 525 (526)
++++++++|+|+++|||++||++| ++|+|++|++||+++++++|++|+
T Consensus 1026 ~~~l~~~~wvvv~lyPf~kgL~gr--~~r~P~~v~v~s~lla~~~~l~~v 1073 (1094)
T PLN02436 1026 FGRLFFALWVIVHLYPFLKGLLGK--QDRMPTIILVWSILLASILTLLWV 1073 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeeehHHHHHHHHHHHHHHe
Confidence 999999999999999999999955 458999999999999999999997
No 5
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=8.2e-127 Score=1066.10 Aligned_cols=515 Identities=34% Similarity=0.622 Sum_probs=474.8
Q ss_pred ChhhHHHHH-hcCCCChhHhhhcCCcccccCccccCCCCceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCc
Q 009753 1 MKTRIELAI-AKGSISKETRNQHKGFSEWNCKVTKQDHQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFK 79 (526)
Q Consensus 1 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~K 79 (526)
||+|||.++ +++++|+++|.|.+|. +|++ .+++|||++|+|+.|++++. |.+|.++|+++||+|||||+++||+|
T Consensus 459 ~k~RIe~l~a~~~~~p~~~~~m~dgt-~W~g-~~~~dHp~IiqVll~~~~~~--d~~g~~lP~LVYVSREKRPg~~Hh~K 534 (1079)
T PLN02638 459 FKVRINGLVAKAQKVPEEGWIMQDGT-PWPG-NNTRDHPGMIQVFLGHSGGL--DTEGNELPRLVYVSREKRPGFQHHKK 534 (1079)
T ss_pred HHHHHHHHHhhccccCCccccccCCc-cCCC-CCCCCCHHHHHHHhcCCCcc--ccccccccceEEEecccCCCCCcccc
Confidence 699999988 7799999998787775 9995 58999999999999998754 55778899999999999999999999
Q ss_pred HHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHH
Q 009753 80 AGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVE 159 (526)
Q Consensus 80 AGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 159 (526)
|||||+++|+|+++||+|||+||||||++|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++
T Consensus 535 AGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~ 614 (1079)
T PLN02638 535 AGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDIN 614 (1079)
T ss_pred cchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCeeeeccceeEehhhhcCCCCCc-------c-----------c-----c-----c-----c-----------
Q 009753 160 LAGIGSYDAALYCGTGCFHRRESLSGAKYPK-------D-----------Y-----R-----N-----I----------- 195 (526)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~-------~-----------~-----~-----~-----~----------- 195 (526)
++|+||+|||+|+||||+|||+||+|..+.. + . . . .
T Consensus 615 ~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1079)
T PLN02638 615 LRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLED 694 (1079)
T ss_pred cccccccCCccccccCcceeehhhcCcCCcccccccccccccccccccccccccccchhhcccccccccccccccccccc
Confidence 9999999999999999999999999973210 0 0 0 0 0
Q ss_pred -c------------------------c--------------ccCCCCcChHHHHHhhchhccccccccCccccccCCCCC
Q 009753 196 -N------------------------E--------------AKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG 236 (526)
Q Consensus 196 -~------------------------~--------------~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~ 236 (526)
. + ...+.+.+.+++++||++|+||+||++|.||+++||.|+
T Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YG 774 (1079)
T PLN02638 695 IEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYG 774 (1079)
T ss_pred ccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCCCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeec
Confidence 0 0 001233467889999999999999999999999999999
Q ss_pred CccchHHHHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccc-cCCcchhhhhhhhh
Q 009753 237 CAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG-HGKIKFGAQMGYCN 315 (526)
Q Consensus 237 svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~ 315 (526)
|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++||++++++|+++| .++|+++||++|++
T Consensus 775 SvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~ 854 (1079)
T PLN02638 775 SVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVN 854 (1079)
T ss_pred ceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHH
Confidence 99999999999999999999998878899999999999999999999999999999999999977 48999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccccchhhHHHHHHHHH
Q 009753 316 YLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAF 395 (526)
Q Consensus 316 ~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~~~l~~~~~G~~~~~ww~~~~~w~i~~~~~~ 395 (526)
+++||++++++++|+++|++||++|++++|+.+.+++++|+++|+++++++++|++|+|.++++|||+||||+|.+++++
T Consensus 855 ~~~yp~~sip~liY~llP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~ 934 (1079)
T PLN02638 855 TTIYPITSIPLLLYCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAH 934 (1079)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHH
Confidence 99999999999999999999999999999988888888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHH
Q 009753 396 FFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNL 475 (526)
Q Consensus 396 ~~~~~~~~~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~~~ 475 (526)
+|+++++++|+||+++++|.||+|..+++.. +++.|+|+ ++|+++|.++++++|++|+++|+++.+.+++..|+.+
T Consensus 935 lfavl~~iLK~Lggs~~~F~VTsK~~d~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~ 1010 (1079)
T PLN02638 935 LFAVFQGLLKVLAGIDTNFTVTSKASDEDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPL 1010 (1079)
T ss_pred HHHHHHHHHHHHccCcccceecccccccccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchh
Confidence 9999999999999999999999998765322 36788998 7999999999999999999999999988666789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccC
Q 009753 476 MCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 525 (526)
Q Consensus 476 ~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~v~~~s~~~~~~~~~~~~ 525 (526)
++++++|+|+|+++|||++||++|+ +|+|++|++||++++++++++|+
T Consensus 1011 ~~~~~~~~wvv~~l~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v 1058 (1079)
T PLN02638 1011 FGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVVWSILLASIFSLLWV 1058 (1079)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998 67999999999999999999987
No 6
>PLN02189 cellulose synthase
Probab=100.00 E-value=2.6e-126 Score=1059.40 Aligned_cols=514 Identities=34% Similarity=0.628 Sum_probs=474.2
Q ss_pred ChhhHHHHH-hcCCCChhHhhhcCCcccccCccccCCCCceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCc
Q 009753 1 MKTRIELAI-AKGSISKETRNQHKGFSEWNCKVTKQDHQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFK 79 (526)
Q Consensus 1 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~K 79 (526)
||+|||.++ +++++|+++|.+.+|. +|++ .+++|||++|+|+.|++++. +.+|.++|+++||+|||||+++||+|
T Consensus 441 ~kvRI~~l~a~~~~~p~~~~~m~dGt-~W~g-~~~~dHp~IiQVll~~~~~~--d~~g~~lP~LVYVSREKrPg~~Hh~K 516 (1040)
T PLN02189 441 FKVRINAIVAKAQKVPPEGWIMQDGT-PWPG-NNTRDHPGMIQVFLGHSGGH--DTEGNELPRLVYVSREKRPGFQHHKK 516 (1040)
T ss_pred HHHHHHHHHhhcCccCCccceeccCc-cCCC-CCCCCCHHHHHHHhcCCCCc--cccccccceeEEEeccCCCCCCcccc
Confidence 699999987 7799999998787776 9995 58999999999999987754 45688899999999999999999999
Q ss_pred HHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHH
Q 009753 80 AGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVE 159 (526)
Q Consensus 80 AGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 159 (526)
|||||+++|+|+++||+|||+||||||++|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++
T Consensus 517 AGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~ 596 (1040)
T PLN02189 517 AGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDIN 596 (1040)
T ss_pred hhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCeeeeccceeEehhhhcCCCCCcc----------------------ccc--------------c--------
Q 009753 160 LAGIGSYDAALYCGTGCFHRRESLSGAKYPKD----------------------YRN--------------I-------- 195 (526)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~----------------------~~~--------------~-------- 195 (526)
++|+||+|||+|+||||+|||+||+|..+.+. .++ +
T Consensus 597 ~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (1040)
T PLN02189 597 MKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQM 676 (1040)
T ss_pred ecccccCCCccccccCceeeeeeeeccCcccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhh
Confidence 99999999999999999999999999743211 000 0
Q ss_pred ----cc--------------ccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEE
Q 009753 196 ----NE--------------AKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMY 257 (526)
Q Consensus 196 ----~~--------------~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y 257 (526)
++ .......+.++++++|++|+||+||++|.||+++||.|+|+|||+.||++||++||||+|
T Consensus 677 ~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY 756 (1040)
T PLN02189 677 NFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIY 756 (1040)
T ss_pred hhHhhhccchhhhhhhhhhhcCCCCCCCcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEe
Confidence 00 001223456789999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccc--cCCcchhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q 009753 258 FKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG--HGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPL 335 (526)
Q Consensus 258 ~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~--~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l 335 (526)
|+|++++|.|+||+|+.+++.||+||++|++||+++++||+++| .++|++.||++|+++++||++++|+++|+++|++
T Consensus 757 ~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l 836 (1040)
T PLN02189 757 CMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAI 836 (1040)
T ss_pred cCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888999999999999999999999999999999999999976 3679999999999999999999999999999999
Q ss_pred HHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCCCee
Q 009753 336 CLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFA 415 (526)
Q Consensus 336 ~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~~~l~~~~~G~~~~~ww~~~~~w~i~~~~~~~~~~~~~~~k~l~~~~~~F~ 415 (526)
||++|++++|..+.+++++|+.++++++++.++|++|+|.++++|||+||||+|.++++++|+++++++|+||+++++|.
T Consensus 837 ~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~ 916 (1040)
T PLN02189 837 CLLTGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFT 916 (1040)
T ss_pred HHhcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccce
Confidence 99999999998888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHH
Q 009753 416 ITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEA 495 (526)
Q Consensus 416 VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~ 495 (526)
||+|..+++. .++.|+|+ ++++++|.++++++|++|+++|+++.+.+++..|+.+++++++|+|+|+++|||++|
T Consensus 917 VTsK~~~d~~----~~~ly~f~-~s~l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kg 991 (1040)
T PLN02189 917 VTSKATDDDE----FGELYAFK-WTTLLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKG 991 (1040)
T ss_pred eccccccccc----cccceeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999876532 25788998 799999999999999999999999998866678999999999999999999999999
Q ss_pred HhhhccCCCCCeeehhhHHHHHHHhhcccC
Q 009753 496 LFIRKDKGCMPFSVMFKSMFLASLACLLPY 525 (526)
Q Consensus 496 l~~Rk~~~~~P~~v~~~s~~~~~~~~~~~~ 525 (526)
|++|+ +|+|++|++||++++++++++|+
T Consensus 992 l~gR~--~r~P~~v~v~s~ll~~~~~l~~v 1019 (1040)
T PLN02189 992 LMGRQ--NRTPTIVVIWSVLLASIFSLLWV 1019 (1040)
T ss_pred HhccC--CCCCeeehHHHHHHHHHHHHHHh
Confidence 99998 67999999999999999999987
No 7
>PLN02195 cellulose synthase A
Probab=100.00 E-value=2.1e-125 Score=1047.48 Aligned_cols=514 Identities=34% Similarity=0.631 Sum_probs=470.6
Q ss_pred ChhhHHHHHhc-CCCChhHhhhcCCcccccCccccCCCCceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCc
Q 009753 1 MKTRIELAIAK-GSISKETRNQHKGFSEWNCKVTKQDHQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFK 79 (526)
Q Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~K 79 (526)
||+|||++++. +++|+++|.|.++ .+|+ +.+++|||++|||+.|++++. |.+|.++|+++||+|||||+++||+|
T Consensus 362 ~k~RIe~~~~~~~~~~~~~~~m~d~-t~W~-g~~~~dHp~IIqVll~~~~~~--d~~g~~lP~LVYVSREKrPg~~Hh~K 437 (977)
T PLN02195 362 YKVRVNALVAKAQKTPEEGWTMQDG-TPWP-GNNTRDHPGMIQVFLGETGAR--DIEGNELPRLVYVSREKRPGYQHHKK 437 (977)
T ss_pred HHHHHHHHHhhcccCCcccccccCC-ccCC-CCCCCCCcchhhhhccCCCCc--ccccccCceeEEEeccCCCCCCcccc
Confidence 69999999966 8999998867665 5999 568999999999998877653 55778899999999999999999999
Q ss_pred HHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHH
Q 009753 80 AGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVE 159 (526)
Q Consensus 80 AGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 159 (526)
|||||+++|+|+++||+|||+++||||++|+|++++++||||+||+.++++||||+||+|+|++++|+|++++++||+++
T Consensus 438 AGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~ 517 (977)
T PLN02195 438 AGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVN 517 (977)
T ss_pred cchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeee
Confidence 99999999999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCeeeeccceeEehhhhcCCCCCc--------------------cccc---------------c---------
Q 009753 160 LAGIGSYDAALYCGTGCFHRRESLSGAKYPK--------------------DYRN---------------I--------- 195 (526)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~--------------------~~~~---------------~--------- 195 (526)
++|+||+|||+|+||||+|||+||+|..+.. .... +
T Consensus 518 ~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (977)
T PLN02195 518 MKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREID 597 (977)
T ss_pred eccccccCCccccccCceeeehhhhccCccccccccccccccccccccccccccccchhhcccccccccccccccccccc
Confidence 9999999999999999999999999863210 0000 0
Q ss_pred --c--c----------------------------ccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHH
Q 009753 196 --N--E----------------------------AKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVV 243 (526)
Q Consensus 196 --~--~----------------------------~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~ 243 (526)
+ + .......+.+++++||++|+||+||++|.||+++||.|+|+|||+.
T Consensus 598 ~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~ 677 (977)
T PLN02195 598 NYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDIL 677 (977)
T ss_pred ccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHH
Confidence 0 0 0012234567899999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccc--cCCcchhhhhhhhhhhhhhh
Q 009753 244 TGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG--HGKIKFGAQMGYCNYLLWAP 321 (526)
Q Consensus 244 t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~--~~~l~~~qrl~y~~~~~~~~ 321 (526)
||++||++||||+||+|.+++|.|+||+|+.++++||+||++|++||+++++||+++| .++|+++||++|+++++||+
T Consensus 678 TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~ 757 (977)
T PLN02195 678 TGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPF 757 (977)
T ss_pred HHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999888899999999999999999999999999999999999975 37899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccccchhhHHHHHHHHHHHHHHH
Q 009753 322 LSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVD 401 (526)
Q Consensus 322 ~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~~~l~~~~~G~~~~~ww~~~~~w~i~~~~~~~~~~~~ 401 (526)
+++|+++|+++|++||++|++++|..+.+++++|+++++++++++++|++|+|.++++|||+||||+|.++++++|++++
T Consensus 758 ~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~ 837 (977)
T PLN02195 758 TSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQ 837 (977)
T ss_pred HHHHHHHHHHHHHHHHHcCCeecccchHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHH
Confidence 99999999999999999999999998888888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHHH
Q 009753 402 CIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIIL 481 (526)
Q Consensus 402 ~~~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~~~~~~l~~ 481 (526)
+++|+|++++++|.||+|..+++. ..+.|+|+ ++|+++|.++++++|++|+++|+++.+.++++.|+.+++++++
T Consensus 838 ~llKvLggs~~~F~VTsK~~dd~~----~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~ 912 (977)
T PLN02195 838 GFLKMLAGLDTNFTVTAKAADDTE----FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFF 912 (977)
T ss_pred HHHHHHcCCCccceeccccccccc----hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHH
Confidence 999999999999999999876521 23456887 7999999999999999999999999998667789999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccC
Q 009753 482 CGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 525 (526)
Q Consensus 482 ~~~~v~~~~p~~~~l~~Rk~~~~~P~~v~~~s~~~~~~~~~~~~ 525 (526)
++|+|+++|||++||++|+ +|+|++|++||++++++++++|+
T Consensus 913 ~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v 954 (977)
T PLN02195 913 AFWVILHLYPFLKGLMGRQ--NRTPTIVVLWSVLLASVFSLVWV 954 (977)
T ss_pred HHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHe
Confidence 9999999999999999998 67999999999999999999987
No 8
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=9.2e-124 Score=1039.23 Aligned_cols=516 Identities=35% Similarity=0.637 Sum_probs=469.4
Q ss_pred ChhhHHHHHhc-CCCChhHhhhcCCcccccCccccCCCCceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCc
Q 009753 1 MKTRIELAIAK-GSISKETRNQHKGFSEWNCKVTKQDHQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFK 79 (526)
Q Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~K 79 (526)
||+|||++++. +++|+++|.|+++. +|++ ...+|||++|||+.|++.+. |.+|.++|+++||+|||||+++||+|
T Consensus 397 ~K~RIe~l~~~~~~~~~~~~~m~dgt-~W~g-~~~~dHp~IIqVll~~~~~~--d~~g~~lP~LVYVSREKRP~~~Hh~K 472 (1044)
T PLN02915 397 FKVRINALVAKAQKKPEEGWVMQDGT-PWPG-NNTRDHPGMIQVYLGSEGAL--DVEGKELPRLVYVSREKRPGYNHHKK 472 (1044)
T ss_pred HHHHHHHHHhhhccCCcccccccCCc-cCCC-CCCCCCccceEEeecCCCCc--ccccCccceeEEEecccCCCCCcchh
Confidence 69999999966 89999998777765 9995 55589999999999987753 55778899999999999999999999
Q ss_pred HHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHH
Q 009753 80 AGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVE 159 (526)
Q Consensus 80 AGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 159 (526)
|||||+++|+|++|||+|||++||||||+|||+.++++||||+||+.++++||||+||+|+|+++||+|+|++++||++.
T Consensus 473 AGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~ 552 (1044)
T PLN02915 473 AGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDIN 552 (1044)
T ss_pred hhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCeeeeccceeEehhhhcCCCCCc---------ccc----------------------c--------------
Q 009753 160 LAGIGSYDAALYCGTGCFHRRESLSGAKYPK---------DYR----------------------N-------------- 194 (526)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~---------~~~----------------------~-------------- 194 (526)
++|+||+|||+|+||||+|||+||+|..+.+ +.. .
T Consensus 553 ~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1044)
T PLN02915 553 MKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRK 632 (1044)
T ss_pred cccccccCCcccccCCceeeeeeecCcCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999974311 000 0
Q ss_pred --------------------------c--c--------c----------------------------ccCCCCcChHHHH
Q 009753 195 --------------------------I--N--------E----------------------------AKNNDNRSVDELE 210 (526)
Q Consensus 195 --------------------------~--~--------~----------------------------~~~~~~~~~~~~~ 210 (526)
+ + + ...+...+.++++
T Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l 712 (1044)
T PLN02915 633 KKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPEGTNPAALI 712 (1044)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCCCCCCCcHHHH
Confidence 0 0 0 0002233567899
Q ss_pred HhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHH
Q 009753 211 KASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQI 290 (526)
Q Consensus 211 ~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi 290 (526)
++|++|+||+||++|.||+++||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.++++||+||++|++||
T Consensus 713 ~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqI 792 (1044)
T PLN02915 713 KEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 792 (1044)
T ss_pred HHHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHhhccccccc-cCCcchhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHH
Q 009753 291 FLSKYCPFIYG-HGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICE 369 (526)
Q Consensus 291 ~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~~~l~ 369 (526)
++++++|++++ .++|+++||++|+++++||+.++++++|+++|++||++|++++|..+..+.+.|+++++++++++++|
T Consensus 793 f~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE 872 (1044)
T PLN02915 793 FMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLE 872 (1044)
T ss_pred HHhccCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999975 47999999999999999999999999999999999999999999765555556667788989999999
Q ss_pred HHHcCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHH
Q 009753 370 ALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATL 449 (526)
Q Consensus 370 ~~~~G~~~~~ww~~~~~w~i~~~~~~~~~~~~~~~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l 449 (526)
++|+|.++++|||+||+|+|.++++++|+++++++|+||+++++|+||+|+.+++..+ .++.|+|+ ++++++|++++
T Consensus 873 ~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTsK~~d~~~d~--~~ely~F~-~S~l~iP~ttl 949 (1044)
T PLN02915 873 LRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAADDEADE--FGELYLFK-WTTLLIPPTTL 949 (1044)
T ss_pred HHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccCCcceecCCccccchhh--hccceeec-ceehHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987654332 25788897 79999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccC
Q 009753 450 AMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 525 (526)
Q Consensus 450 ~ll~l~alv~g~~r~~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~v~~~s~~~~~~~~~~~~ 525 (526)
+++|++|+++|+++.+.+.++.|+.+++++++++|++++++||++||++|+ +|+|++|++||++++++++++|+
T Consensus 950 lllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~v 1023 (1044)
T PLN02915 950 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVWV 1023 (1044)
T ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHHh
Confidence 999999999999999876677899999999999999999999999999998 57999999999999999999997
No 9
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=6e-123 Score=1033.96 Aligned_cols=503 Identities=30% Similarity=0.533 Sum_probs=449.8
Q ss_pred ChhHhhhcCCcccccCc-------cccCCCCceEEEEeCCCChH----------HHHH--hccCCCcEEEEEccCCCCCC
Q 009753 15 SKETRNQHKGFSEWNCK-------VTKQDHQSIVQIIVDGRDTN----------AVDK--EGCQLPTLVYMAREKRPGCP 75 (526)
Q Consensus 15 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~VldD~~~~~----------~~~~--~~~~~p~v~yv~R~~~p~~~ 75 (526)
|+++| |+||+ +|+++ +.++|||++|||+.|+++.+ ..|. .+.++|+++||+|||||+++
T Consensus 522 ~~~~w-m~dgt-~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~lP~LVYVSREKRPg~~ 599 (1135)
T PLN02248 522 PKATW-MADGT-HWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGYD 599 (1135)
T ss_pred cccee-eccCC-cCCCcccCcccCCCCCCCcceeEEeccCCCcccccCcccccccccccccccccceeEEEecccCCCCC
Confidence 44455 77777 77654 68899999999998865521 2222 23489999999999999999
Q ss_pred CCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHH
Q 009753 76 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVV 155 (526)
Q Consensus 76 ~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f 155 (526)
||+||||||+++|+|+++||+|||+||||||++|||++++++||||+||+ ++++||||+||+|+|++++|+|+|++++|
T Consensus 600 Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQrF~~I~k~D~Ygn~~~Vf 678 (1135)
T PLN02248 600 HNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQRFEGIDPSDRYANHNTVF 678 (1135)
T ss_pred cccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcccCCCCCCCccCCcceee
Confidence 99999999999999999999999999999999999999999999999996 88999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCc---------------ccc---------------cc----------
Q 009753 156 NQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPK---------------DYR---------------NI---------- 195 (526)
Q Consensus 156 ~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~---------------~~~---------------~~---------- 195 (526)
|+++++|+||+|||+||||||+|||+||+|..+.. +.+ ++
T Consensus 679 fdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 758 (1135)
T PLN02248 679 FDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPK 758 (1135)
T ss_pred eeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 99999999999999999999999999999963210 000 00
Q ss_pred cc------------cc-C---------------------CCCcChHHHHHhhchhccccccccCccccccCCCCCCccch
Q 009753 196 NE------------AK-N---------------------NDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAED 241 (526)
Q Consensus 196 ~~------------~~-~---------------------~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED 241 (526)
++ +. + ......+++++||++|+||+||++|.||+++||.|+|+|||
T Consensus 759 rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTED 838 (1135)
T PLN02248 759 RFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTED 838 (1135)
T ss_pred hhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceech
Confidence 00 00 0 11123457899999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccccCCcchhhhhhhhhhhhhhh
Q 009753 242 VVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAP 321 (526)
Q Consensus 242 ~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~ 321 (526)
+.||++||++||||+||++++++|.|+||+|+.++++||+||++|++||++++++|++.+ ++|++.||++|+++++||+
T Consensus 839 v~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~Lsl~QRL~Yl~~~lypf 917 (1135)
T PLN02248 839 VVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RRLKFLQRIAYLNVGIYPF 917 (1135)
T ss_pred HHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CCCCHHHHHHHHHHHHHHH
Confidence 999999999999999998888899999999999999999999999999999999998864 6899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhCCccccccchhhHHHHH-HHHHHHHHHHHHHHHHcCCcccccccchhhHHHHHHHHHHHHHH
Q 009753 322 LSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFA-YVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFV 400 (526)
Q Consensus 322 ~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~-~l~~~~~~~~~l~~~~~G~~~~~ww~~~~~w~i~~~~~~~~~~~ 400 (526)
+++++++|+++|++||++|++++|+. .++|++|+ .++++++.++++|.+|+|.++++|||+||+|+|.++++++++++
T Consensus 918 ~Slp~liY~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l 996 (1135)
T PLN02248 918 TSIFLIVYCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVL 996 (1135)
T ss_pred HHHHHHHHHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHH
Confidence 99999999999999999999999986 56666766 44577789999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHH
Q 009753 401 DCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQII 480 (526)
Q Consensus 401 ~~~~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~~~~~~l~ 480 (526)
++++|+|++++++|+||+|+.+++..++| ++.|+|+ ++++++|+++++++|++|+++|++|++.+.++.|+.++++++
T Consensus 997 ~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~ 1074 (1135)
T PLN02248 997 QGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVF 1074 (1135)
T ss_pred HHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHH
Confidence 99999999999999999999877666667 6899998 789999999999999999999999999876677899999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccCC
Q 009753 481 LCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPYV 526 (526)
Q Consensus 481 ~~~~~v~~~~p~~~~l~~Rk~~~~~P~~v~~~s~~~~~~~~~~~~~ 526 (526)
+++|+++++|||++||++| ++|+|++|++||++++++++++|+.
T Consensus 1075 ~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll~v~ 1118 (1135)
T PLN02248 1075 FSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLLWVA 1118 (1135)
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHHheE
Confidence 9999999999999999999 5679999999999999999999973
No 10
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.2e-121 Score=999.27 Aligned_cols=506 Identities=32% Similarity=0.585 Sum_probs=451.2
Q ss_pred ChhhHHHHHhcCCCChhHhhhcCCcccccCccccCCCCceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcH
Q 009753 1 MKTRIELAIAKGSISKETRNQHKGFSEWNCKVTKQDHQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKA 80 (526)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KA 80 (526)
||+|||+++ .++.+.+.+++ +.+|+ +++++|||++|||+.|++++ +..++++|+++||+|||||+++||+||
T Consensus 200 ~k~ri~~a~-~~~~~~~~~~~---~~~~~-~~~~~dH~~iiqVll~~~~~---~~~~~~lP~LVYvSREKrP~~~Hh~KA 271 (756)
T PLN02190 200 LSRKVEDAT-GDSHWLDAEDD---FEAFS-NTKPNDHSTIVKVVWENKGG---VGDEKEVPHLVYISREKRPNYLHHYKA 271 (756)
T ss_pred HHHHHHhhc-cCCCCcccCCc---ccccC-CCCCCCCccceEEEecCCCC---ccccccCceEEEEeccCCCCCCccccc
Confidence 689999996 35665554333 34455 78999999999999998654 235778999999999999999999999
Q ss_pred HHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCC-CcEEEEecCcccccCCccccchhhHHHHHHHH
Q 009753 81 GAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKRE-HEIAFVQHPQRFDNICKNDLYANSYLVVNQVE 159 (526)
Q Consensus 81 GaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~-~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 159 (526)
||||+++|+|+++||+|||+++||||++|||++++++||||+|++.+ +++||||+||+|+ |+|+|++++||++.
T Consensus 272 GAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~ 346 (756)
T PLN02190 272 GAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYL 346 (756)
T ss_pred chhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEe
Confidence 99999999999999999999999999999999999999999998644 4899999999997 67999999999999
Q ss_pred HHHHhhcCCeeeeccceeEehhhhcCCCCC---ccc----------cc-----ccc--c----------c---CCCCcCh
Q 009753 160 LAGIGSYDAALYCGTGCFHRRESLSGAKYP---KDY----------RN-----INE--A----------K---NNDNRSV 206 (526)
Q Consensus 160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~---~~~----------~~-----~~~--~----------~---~~~~~~~ 206 (526)
++|+||+|||+|+||||+|||+||+|..+. ++. .. +++ + . ...+.+.
T Consensus 347 ~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~~~~ 426 (756)
T PLN02190 347 GRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQNSL 426 (756)
T ss_pred eccccccCCcccccCCcceEeeeecCCCcccccccccccccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCCccch
Confidence 999999999999999999999999997421 000 00 000 0 0 1113355
Q ss_pred HHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhh
Q 009753 207 DELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEG 286 (526)
Q Consensus 207 ~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 286 (526)
++++++|++|+||+||++|.||+++||.|+|+|||+.||++||++||||+||++++++|.|.+|+++.+.++||+||++|
T Consensus 427 ~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G 506 (756)
T PLN02190 427 TNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATG 506 (756)
T ss_pred HHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhh
Confidence 78999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred hHHHHHhhccccccc-cCCcchhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHH
Q 009753 287 MFQIFLSKYCPFIYG-HGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAY 365 (526)
Q Consensus 287 ~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~ 365 (526)
++||+++++||++.+ .++|+++||++|+++.+ |++++|+++|+++|++||++|++++|.. +|++++++++++++++
T Consensus 507 ~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~ 583 (756)
T PLN02190 507 LIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLY 583 (756)
T ss_pred hHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHH
Confidence 999999999999875 58999999999999988 9999999999999999999999999974 6778888888889999
Q ss_pred HHHHHHHcCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeCCCCCc-------------chhhhHhhhh
Q 009753 366 SICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVT-------------EDVMERYEQE 432 (526)
Q Consensus 366 ~~l~~~~~G~~~~~ww~~~~~w~i~~~~~~~~~~~~~~~k~l~~~~~~F~VT~K~~~-------------~~~~~~~~~~ 432 (526)
+++|++|+|.++++||||||||+|.++++|++|++++++|+||+++++|+||+|..+ +++.++|++|
T Consensus 584 ~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (756)
T PLN02190 584 TLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSG 663 (756)
T ss_pred HHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEeeccccccccccccccccccccchhhhcc
Confidence 999999999999999999999999999999999999999999999999999999754 3456788999
Q ss_pred ceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhc---ccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeee
Q 009753 433 MMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFL---DFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSV 509 (526)
Q Consensus 433 ~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~---~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~v 509 (526)
+|+|+ ++|+++|.++++++|++|+++|+++++.+ ..+.++. ++++++|+|+|++++||++||+ |||||++|.|+
T Consensus 664 ~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~~~~-l~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~ 740 (756)
T PLN02190 664 KFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGGGSG-LAEACGCILVVMLFLPFLKGLF-EKGKYGIPLST 740 (756)
T ss_pred eeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccc-HHHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhH
Confidence 99998 79999999999999999999999887642 1234554 5999999999999999999998 99999999999
Q ss_pred hhhHHHHHHHhhcccC
Q 009753 510 MFKSMFLASLACLLPY 525 (526)
Q Consensus 510 ~~~s~~~~~~~~~~~~ 525 (526)
+++|++|+++|+.+.+
T Consensus 741 ~~~s~~l~~~f~~~~~ 756 (756)
T PLN02190 741 LSKAAFLAVLFVVFSV 756 (756)
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999999998753
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=9.2e-61 Score=539.43 Aligned_cols=391 Identities=19% Similarity=0.276 Sum_probs=319.4
Q ss_pred cccCCCCc---eEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCC
Q 009753 32 VTKQDHQS---IVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYA 108 (526)
Q Consensus 32 ~~~~~~~~---~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~ 108 (526)
...+|||. +|+|+||+++|++.+... + .++.|++|++| .|+||||+|+|+++ ++||||+++|||++|
T Consensus 283 ~l~~dYP~~k~EViVVDDgS~D~t~~la~-~-~~v~yI~R~~n----~~gKAGnLN~aL~~----a~GEyIavlDAD~ip 352 (852)
T PRK11498 283 SLGIDWPKDKLNIWILDDGGREEFRQFAQ-E-VGVKYIARPTH----EHAKAGNINNALKY----AKGEFVAIFDCDHVP 352 (852)
T ss_pred HHhccCCCCceEEEEEeCCCChHHHHHHH-H-CCcEEEEeCCC----CcchHHHHHHHHHh----CCCCEEEEECCCCCC
Confidence 44688985 699999999998543222 1 24999999876 58999999999999 899999999999999
Q ss_pred CcHHHHHHHHHHh-hcccCCCcEEEEecCcccccCCccc-------cchhhHHHHHHHHHHHHhhcCCeeeeccceeEeh
Q 009753 109 NDGDAIREALCFL-LDEKREHEIAFVQHPQRFDNICKND-------LYANSYLVVNQVELAGIGSYDAALYCGTGCFHRR 180 (526)
Q Consensus 109 ~~p~~L~~~v~~f-~d~~~~~~va~VQ~pq~f~n~~~~d-------~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR 180 (526)
+||+|++++++| .|| ++|+||+||.|+|.++.. .+.++.+.||+.++.|++.++++++|||++++||
T Consensus 353 -~pdfL~~~V~~f~~dP----~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRR 427 (852)
T PRK11498 353 -TRSFLQMTMGWFLKDK----KLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRR 427 (852)
T ss_pred -ChHHHHHHHHHHHhCC----CeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEH
Confidence 799999999986 455 899999999999865421 2345677899999999999999999999999999
Q ss_pred hhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCC
Q 009753 181 ESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKP 260 (526)
Q Consensus 181 ~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~ 260 (526)
++++++ |||+++++|||++++++||++||+++|+++
T Consensus 428 eaLeeV--------------------------------------------GGfd~~titED~dlslRL~~~Gyrv~yl~~ 463 (852)
T PRK11498 428 KPLDEI--------------------------------------------GGIAVETVTEDAHTSLRLHRRGYTSAYMRI 463 (852)
T ss_pred HHHHHh--------------------------------------------cCCCCCccCccHHHHHHHHHcCCEEEEEec
Confidence 999864 899999999999999999999999999987
Q ss_pred CCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccccCCcchhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHhC
Q 009753 261 NKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHG 340 (526)
Q Consensus 261 ~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g 340 (526)
+ ...|++|+|++++++||.||++|++|+++.+ +|++ .+++++.||++|++++++++.+++.++|+++|++|+++|
T Consensus 464 ~--~a~glaPesl~~~~~QR~RWarG~lQi~r~~-~pl~--~~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~g 538 (852)
T PRK11498 464 P--QAAGLATESLSAHIGQRIRWARGMVQIFRLD-NPLT--GKGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLLH 538 (852)
T ss_pred c--ceeEECCCCHHHHHHHHHHHHHHHHHHHHHh-Chhc--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5 4579999999999999999999999999865 8987 589999999999999999999999999999999999999
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeCCCC
Q 009753 341 ISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKM 420 (526)
Q Consensus 341 ~~~~~~~~~~~~l~f~~l~~~~~~~~~l~~~~~G~~~~~ww~~~~~w~i~~~~~~~~~~~~~~~k~l~~~~~~F~VT~K~ 420 (526)
+.++.+. +..+++++++.+....+.....+|.....||++. +..+.++.. ...++..++++++.+|+||||+
T Consensus 539 i~~i~a~---~~~i~~y~lP~~~~~~l~~~~~~g~~r~~~wsei----ye~v~a~~l-~~~~~~~ll~p~~~~F~VTpKg 610 (852)
T PRK11498 539 AYIIYAP---ALMIALFVLPHMIHASLTNSRIQGKYRHSFWSEI----YETVLAWYI-APPTTVALFNPHKGKFNVTAKG 610 (852)
T ss_pred ChheeCC---hHHHHHHHHHHHHHHHHHHHHhcCcchHhHHHHH----HHHHHHHHH-HHHHHHHHcCccCCCcccCCCC
Confidence 9988653 2222233333333333444445666666778763 444444443 4455666899999999999998
Q ss_pred CcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009753 421 VTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRK 500 (526)
Q Consensus 421 ~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk 500 (526)
+..+ ++.|+|+ +..|+++++++|++|+++|++++..++......+.++++|+.|+++++...+....+|+
T Consensus 611 ~~~~------~~~~~~~----~~~P~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~ 680 (852)
T PRK11498 611 GLVE------EEYVDWV----ISRPYIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESK 680 (852)
T ss_pred cccc------ccceehH----HHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 6542 2345654 56678889999999999999999875444456678999999999999999999999998
Q ss_pred cCCC
Q 009753 501 DKGC 504 (526)
Q Consensus 501 ~~~~ 504 (526)
+.++
T Consensus 681 ~~r~ 684 (852)
T PRK11498 681 QVRR 684 (852)
T ss_pred CCCC
Confidence 8664
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=2.8e-59 Score=528.08 Aligned_cols=392 Identities=23% Similarity=0.343 Sum_probs=321.5
Q ss_pred cccCCCCc---eEEEEeCCCChHHH--------------HHhc--cCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccc
Q 009753 32 VTKQDHQS---IVQIIVDGRDTNAV--------------DKEG--CQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSV 92 (526)
Q Consensus 32 ~~~~~~~~---~v~VldD~~~~~~~--------------~~~~--~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~ 92 (526)
...+|||. +|+|+||+++|+.+ ++.. .+-.++.|++|++| +|+||||||+|+++
T Consensus 154 ~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~yi~r~~n----~~~KAgnLN~al~~--- 226 (713)
T TIGR03030 154 AKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNYITRPRN----VHAKAGNINNALKH--- 226 (713)
T ss_pred HHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcEEEECCCC----CCCChHHHHHHHHh---
Confidence 44689984 79999999866421 0100 01235999999987 68999999999999
Q ss_pred cCCCcEEEEeCCCCCCCcHHHHHHHHHHhh-cccCCCcEEEEecCcccccCCcc-------ccchhhHHHHHHHHHHHHh
Q 009753 93 ISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKN-------DLYANSYLVVNQVELAGIG 164 (526)
Q Consensus 93 ~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~-d~~~~~~va~VQ~pq~f~n~~~~-------d~~~~~~~~f~~~~~~g~d 164 (526)
++||+|+++|||+++ +||+|++++++|. || ++++||+||.|+|.++. +.+.++++.||+.++.|++
T Consensus 227 -a~gd~Il~lDAD~v~-~pd~L~~~v~~f~~dp----~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~ 300 (713)
T TIGR03030 227 -TDGELILIFDADHVP-TRDFLQRTVGWFVEDP----KLFLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQDGND 300 (713)
T ss_pred -cCCCEEEEECCCCCc-ChhHHHHHHHHHHhCC----CEEEEeCCeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHh
Confidence 899999999999999 7999999999995 55 89999999999986531 2345677889999999999
Q ss_pred hcCCeeeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHH
Q 009753 165 SYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVT 244 (526)
Q Consensus 165 ~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t 244 (526)
.++++++||+|+++||++++++ |||++++++||+++
T Consensus 301 ~~~~~~~~Gs~~~iRR~al~~i--------------------------------------------GGf~~~~vtED~~l 336 (713)
T TIGR03030 301 FWNAAFFCGSAAVLRREALDEI--------------------------------------------GGIAGETVTEDAET 336 (713)
T ss_pred hhCCeeecCceeEEEHHHHHHc--------------------------------------------CCCCCCCcCcHHHH
Confidence 9999999999999999999864 89999999999999
Q ss_pred HHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccccCCcchhhhhhhhhhhhhhhhHH
Q 009753 245 GLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSL 324 (526)
Q Consensus 245 ~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~ 324 (526)
+++||++||+++|++++ .+.|++|+|++++++||.||++|++|+++.+ +|++ .+++++.||++|+++++||+.++
T Consensus 337 ~~rL~~~G~~~~y~~~~--~~~g~~p~sl~~~~~Qr~RWa~G~~qi~~~~-~pl~--~~gl~~~qrl~y~~~~~~~~~~~ 411 (713)
T TIGR03030 337 ALKLHRRGWNSAYLDRP--LIAGLAPETLSGHIGQRIRWAQGMMQIFRLD-NPLL--KRGLSFPQRLCYLNAMLFWFFPL 411 (713)
T ss_pred HHHHHHcCCeEEEeccc--cccccCCCCHHHHHHHHHHHhcChHHHHhhh-Cccc--cCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999975 4579999999999999999999999999866 8987 57999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHH-HHHcCCcccccccchhhHHHHHHHHHHHHHHHHH
Q 009753 325 PTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICE-ALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCI 403 (526)
Q Consensus 325 ~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~~~l~-~~~~G~~~~~ww~~~~~w~i~~~~~~~~~~~~~~ 403 (526)
+.++|+++|++++++|++++++.. ..++. ++ +..++.+++. ....|.....||++ +..+...++.+..++
T Consensus 412 ~~~~~~~~P~~~l~~~~~~~~~~~-~~~~~--~~-lp~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 482 (713)
T TIGR03030 412 PRVIFLTAPLAYLFFGLNIFVASA-LEILA--YA-LPHMLHSLLTNSYLFGRVRWPFWSE-----VYETVLAVYLLPPVL 482 (713)
T ss_pred HHHHHHHHHHHHHHhCCcceeCCH-HHHHH--HH-HHHHHHHHHHHHHHcCCeecchHHH-----HHHHHHHHHHHHHHH
Confidence 999999999999999999998742 22222 22 2333334433 33556666788976 344444556777888
Q ss_pred HHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHH
Q 009753 404 VKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCG 483 (526)
Q Consensus 404 ~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~~~~~~l~~~~ 483 (526)
.+++++++.+|+||||++..+.. + .++++.|++++++++++|+++|++++..+ ......++++++|+.
T Consensus 483 ~~~~~~~~~~F~VT~Kg~~~~~~--~---------~~~~~~p~~~l~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~w~~ 550 (713)
T TIGR03030 483 VTLLNPKKPKFNVTPKGELLDED--Y---------FSPLSRPYLILFALILAGLAFGLYRIYGY-PIERGVLLVVLGWNL 550 (713)
T ss_pred HHHhCcCCCCceecCCCcccccc--c---------cchHHHHHHHHHHHHHHHHHHHHHHHhcC-ccccchhhHHHHHHH
Confidence 88999999999999998754221 1 24789999999999999999999998653 233456789999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCC
Q 009753 484 LMVLVNVPIYEALFIRKDKGCMP 506 (526)
Q Consensus 484 ~~v~~~~p~~~~l~~Rk~~~~~P 506 (526)
|+++++...+.+..+|+++++.|
T Consensus 551 ~n~~~~~~~~~~~~~r~QrR~~~ 573 (713)
T TIGR03030 551 LNLILLGAALAVVAERRQRRSSP 573 (713)
T ss_pred HHHHHHHHHHHHHccCCCCCCcc
Confidence 99999999999999999987533
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=6.8e-32 Score=301.57 Aligned_cols=248 Identities=17% Similarity=0.193 Sum_probs=189.2
Q ss_pred cCCCC--ceEEEEeCCCChHHHH-------HhccC---CCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEE
Q 009753 34 KQDHQ--SIVQIIVDGRDTNAVD-------KEGCQ---LPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILN 101 (526)
Q Consensus 34 ~~~~~--~~v~VldD~~~~~~~~-------~~~~~---~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~i 101 (526)
+++|+ .+++|+||+++|++.. +..++ .+++.|.+|++| .+.||||+|.+++..+ .++|||++
T Consensus 153 ~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivv 226 (691)
T PRK05454 153 ATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVV 226 (691)
T ss_pred hcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEE
Confidence 45665 4789999999987321 11122 357999999887 5789999999999865 67899999
Q ss_pred eCCCCCCCcHHHHHHHHHHhh-cccCCCcEEEEecCcccccCCccccchhhH----HHHHHHHHHHHhhcC--Ceeeecc
Q 009753 102 LDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKNDLYANSY----LVVNQVELAGIGSYD--AALYCGT 174 (526)
Q Consensus 102 lDaD~~~~~p~~L~~~v~~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~----~~f~~~~~~g~d~~~--~~~~~Gt 174 (526)
+|||+++ +||+|++++++|. || ++|+||+++.+.|.+ ..++.-+ .++......|.+.|+ ...|+|+
T Consensus 227 LDADs~m-~~d~L~~lv~~m~~dP----~vGlVQt~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~ 299 (691)
T PRK05454 227 LDADSLM-SGDTLVRLVRLMEANP----RAGLIQTLPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGH 299 (691)
T ss_pred EcCCCCC-CHHHHHHHHHHHhhCc----CEEEEeCCccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccc
Confidence 9999999 7999999999996 66 899999999988764 3444322 223345667887766 3468999
Q ss_pred ceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCe
Q 009753 175 GCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWK 254 (526)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwr 254 (526)
|+++||+|+.+. |..+.- -| .+||..++++||+++|.+|+++|||
T Consensus 300 naIiR~~af~~~--------------------------------~glp~L--~g-~~p~~~~~LseD~~~a~~l~~~Gyr 344 (691)
T PRK05454 300 NAIIRVKAFAEH--------------------------------CGLPPL--PG-RGPFGGHILSHDFVEAALMRRAGWG 344 (691)
T ss_pred eEEEEHHHHHHh--------------------------------cCCccc--cc-cCCCCCCcccHHHHHHHHHHHCCCE
Confidence 999999999642 222110 01 3789899999999999999999999
Q ss_pred EEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccccCCcchhhhhhhhhhhhhhhhHHHHHH-HHHHH
Q 009753 255 SMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLF-YVIVP 333 (526)
Q Consensus 255 s~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~-~~~~P 333 (526)
++|+++. ..+++++|+|+.++++||.||++|++|++.. +. .+++++.+|++|++..+.++.+...++ +++.|
T Consensus 345 V~~~pd~-~~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~----l~--~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~ 417 (691)
T PRK05454 345 VWLAPDL-PGSYEELPPNLLDELKRDRRWCQGNLQHLRL----LL--AKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGT 417 (691)
T ss_pred EEEcCcc-ccccccCCCCHHHHHHHHHHHHhchHHHHHH----HH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999874 3468999999999999999999999998753 12 478999999999887666655444443 44444
Q ss_pred HHH
Q 009753 334 PLC 336 (526)
Q Consensus 334 ~l~ 336 (526)
++.
T Consensus 418 ~~~ 420 (691)
T PRK05454 418 ALA 420 (691)
T ss_pred HHH
Confidence 444
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=2.5e-33 Score=280.49 Aligned_cols=207 Identities=19% Similarity=0.225 Sum_probs=163.3
Q ss_pred cCCC--CceEEEEeCCCChHHH--HH-----hc---cCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEE
Q 009753 34 KQDH--QSIVQIIVDGRDTNAV--DK-----EG---CQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILN 101 (526)
Q Consensus 34 ~~~~--~~~v~VldD~~~~~~~--~~-----~~---~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~i 101 (526)
.++| ..+|+|+||+++++.. +. .. .+.++++|++|+++ .|.||||||++++..+ +++|||++
T Consensus 28 ~~~~~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~ 101 (254)
T cd04191 28 KTGLADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRREN----TGRKAGNIADFCRRWG--SRYDYMVV 101 (254)
T ss_pred hcCCcCceEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEE
Confidence 4666 4679999999997621 11 11 12678999999997 5899999999998633 68899999
Q ss_pred eCCCCCCCcHHHHHHHHHHhh-cccCCCcEEEEecCcccccCCccccchh----hHHHHHHHHHHHHhhcCC--eeeecc
Q 009753 102 LDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKNDLYAN----SYLVVNQVELAGIGSYDA--ALYCGT 174 (526)
Q Consensus 102 lDaD~~~~~p~~L~~~v~~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~--~~~~Gt 174 (526)
+|||+.+ +|++|++++.+|. || ++|+||+|+.+.|.+. .+.. +...|...++.|++.|++ .+|+|+
T Consensus 102 ~DaD~~~-~p~~l~~~v~~~~~~~----~vg~vq~~~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 174 (254)
T cd04191 102 LDADSLM-SGDTIVRLVRRMEANP----RAGIIQTAPKLIGAET--LFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGH 174 (254)
T ss_pred EeCCCCC-CHHHHHHHHHHHHhCC----CEEEEeCCceeECCCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCccCccce
Confidence 9999999 7999999999996 66 8999999999998642 2322 234455667788877643 578999
Q ss_pred ceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCe
Q 009753 175 GCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWK 254 (526)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwr 254 (526)
++++||+||+.. |..+ .-|..+||..++++||+++|++++.+|||
T Consensus 175 ~~~~Rr~al~~~--------------------------------~~~~---~i~g~g~~~~~~l~eD~~l~~~~~~~G~r 219 (254)
T cd04191 175 NAIIRVAAFMEH--------------------------------CALP---VLPGRPPFGGHILSHDFVEAALMRRAGWE 219 (254)
T ss_pred EEEEEHHHHHHh--------------------------------cCCc---cccCCCCCCCCeecHHHHHHHHHHHcCCE
Confidence 999999999642 1111 01113678889999999999999999999
Q ss_pred EEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHH
Q 009753 255 SMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQ 289 (526)
Q Consensus 255 s~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lq 289 (526)
++|.++.. +.++++|+|++++++||.||++|++|
T Consensus 220 i~~~~~~~-~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 220 VRLAPDLE-GSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred EEEccCCc-ceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 99998742 34789999999999999999999987
No 15
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.98 E-value=3.9e-30 Score=276.97 Aligned_cols=203 Identities=18% Similarity=0.177 Sum_probs=166.4
Q ss_pred cccCCCCc-eEEEEeCCCChHHHH---HhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC
Q 009753 32 VTKQDHQS-IVQIIVDGRDTNAVD---KEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY 107 (526)
Q Consensus 32 ~~~~~~~~-~v~VldD~~~~~~~~---~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~ 107 (526)
..+++||. +|.|+||+++|++.+ +...+.|++.++.+++| ++||+|+|.|++. +++|+++++|||++
T Consensus 97 ll~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n-----~Gka~AlN~gl~~----a~~d~iv~lDAD~~ 167 (444)
T PRK14583 97 ALAQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHN-----QGKAIALRMGAAA----ARSEYLVCIDGDAL 167 (444)
T ss_pred HHcCCCCCeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCC-----CCHHHHHHHHHHh----CCCCEEEEECCCCC
Confidence 45678875 699999999987543 33446788888887664 5799999999998 89999999999999
Q ss_pred CCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchh----hHHHHHHHHHHHHhhcCCee-eeccceeEehhh
Q 009753 108 ANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN----SYLVVNQVELAGIGSYDAAL-YCGTGCFHRRES 182 (526)
Q Consensus 108 ~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~a 182 (526)
+ +||++++++..|.+ +++++.||+.+...|.+ ..++. +...+++.+.++.+..+..+ .+|+++++||++
T Consensus 168 ~-~~d~L~~lv~~~~~---~~~~g~v~g~~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~a 241 (444)
T PRK14583 168 L-DKNAVPYLVAPLIA---NPRTGAVTGNPRIRTRS--TLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRA 241 (444)
T ss_pred c-CHHHHHHHHHHHHh---CCCeEEEEccceecCCC--cchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHH
Confidence 9 89999999988863 33899999987766532 22322 33445556677777777655 479999999999
Q ss_pred hcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCCC
Q 009753 183 LSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNK 262 (526)
Q Consensus 183 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~~ 262 (526)
+.++ |||+.++++||+++++|++.+||++.|+++
T Consensus 242 l~~v--------------------------------------------Gg~~~~~i~ED~dl~~rl~~~G~~i~~~p~-- 275 (444)
T PRK14583 242 LADV--------------------------------------------GYWSPDMITEDIDISWKLQLKHWSVFFEPR-- 275 (444)
T ss_pred HHHc--------------------------------------------CCCCCCcccccHHHHHHHHHcCCeEEEeec--
Confidence 9763 899999999999999999999999999987
Q ss_pred CceeeccCCCHHHHHHHHhhhhhhhHHHHHhhc
Q 009753 263 PAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKY 295 (526)
Q Consensus 263 ~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~ 295 (526)
+.+++++|+|++++++||.||++|.+|+++++.
T Consensus 276 a~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~ 308 (444)
T PRK14583 276 GLCWILMPETLRGLWKQRLRWAQGGAEVFLKNM 308 (444)
T ss_pred cEEeeeCCCCHHHHHHHHHHHhCcHHHHHHHHH
Confidence 467899999999999999999999999998754
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=3.6e-30 Score=274.70 Aligned_cols=206 Identities=24% Similarity=0.313 Sum_probs=162.6
Q ss_pred CccccCCCCc-eEEEEeCCCChHH---HHHhccCC-CcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCC
Q 009753 30 CKVTKQDHQS-IVQIIVDGRDTNA---VDKEGCQL-PTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDC 104 (526)
Q Consensus 30 ~~~~~~~~~~-~v~VldD~~~~~~---~~~~~~~~-p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDa 104 (526)
....++|||. +|+|+||+++|++ +++.+.+. |+++.+..++ .+++|++|+|.+++. +++|+|+++||
T Consensus 75 ~s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~Da 146 (439)
T COG1215 75 ESLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYPEK----KNGGKAGALNNGLKR----AKGDVVVILDA 146 (439)
T ss_pred HHHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEeccc----cCccchHHHHHHHhh----cCCCEEEEEcC
Confidence 3467899996 8999999998873 45555555 4666663312 268999999999998 78999999999
Q ss_pred CCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHH----HHHH-HHhhcCCeeeeccceeEe
Q 009753 105 DMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQ----VELA-GIGSYDAALYCGTGCFHR 179 (526)
Q Consensus 105 D~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~----~~~~-g~d~~~~~~~~Gtg~~~R 179 (526)
|++| +||+|+++++.|.|+. .+|.+|.|+.+.+.+....++..+...|. ...+ +.+.....+++|++.++|
T Consensus 147 D~~~-~~d~l~~~~~~f~~~~---~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~r 222 (439)
T COG1215 147 DTVP-EPDALRELVSPFEDPP---VGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFR 222 (439)
T ss_pred CCCC-ChhHHHHHHhhhcCCC---eeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEE
Confidence 9999 7999999999999764 44799999887765322223322222222 2222 222223567899999999
Q ss_pred hhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeC
Q 009753 180 RESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFK 259 (526)
Q Consensus 180 R~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~ 259 (526)
|++|.+. |||...++|||.++++++|.+|||+.|++
T Consensus 223 r~aL~~~--------------------------------------------g~~~~~~i~ED~~lt~~l~~~G~~~~~~~ 258 (439)
T COG1215 223 RSALEEV--------------------------------------------GGWLEDTITEDADLTLRLHLRGYRVVYVP 258 (439)
T ss_pred HHHHHHh--------------------------------------------CCCCCCceeccHHHHHHHHHCCCeEEEee
Confidence 9999863 78999999999999999999999999998
Q ss_pred CCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHh
Q 009753 260 PNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLS 293 (526)
Q Consensus 260 ~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~ 293 (526)
+. .+++++|+|+.++++||.||++|++|++..
T Consensus 259 ~~--~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 259 EA--IVWTEAPETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred cc--eEeeeCcccHHHHHHHHHHHHcccceeeeh
Confidence 84 578999999999999999999999999875
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.97 E-value=5.8e-29 Score=265.35 Aligned_cols=202 Identities=21% Similarity=0.231 Sum_probs=162.8
Q ss_pred cccCCCCc-eEEEEeCCCChHHH---HHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC
Q 009753 32 VTKQDHQS-IVQIIVDGRDTNAV---DKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY 107 (526)
Q Consensus 32 ~~~~~~~~-~v~VldD~~~~~~~---~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~ 107 (526)
..+++||. +|.|+||+++|++. ++...+.|++.++.+++| .+||+|+|.|++. +++|+++++|||++
T Consensus 76 l~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n-----~Gka~aln~g~~~----a~~d~i~~lDaD~~ 146 (420)
T PRK11204 76 LLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAEN-----QGKANALNTGAAA----ARSEYLVCIDGDAL 146 (420)
T ss_pred HHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCC
Confidence 45688885 79999999998743 334456788999987765 5799999999998 89999999999999
Q ss_pred CCcHHHHHHHHHHhh-cccCCCcEEEEecCcccccCCccccchhhH----HHHHHHHHHHHhhcCCee-eeccceeEehh
Q 009753 108 ANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKNDLYANSY----LVVNQVELAGIGSYDAAL-YCGTGCFHRRE 181 (526)
Q Consensus 108 ~~~p~~L~~~v~~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~----~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~ 181 (526)
+ +||+|++++..|. || +++.||+.....|.. ...+..+ ...++...++....+... .+|+++++||+
T Consensus 147 ~-~~d~L~~l~~~~~~~~----~v~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~ 219 (420)
T PRK11204 147 L-DPDAAAYMVEHFLHNP----RVGAVTGNPRIRNRS--TLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKS 219 (420)
T ss_pred C-ChhHHHHHHHHHHhCC----CeEEEECCceeccch--hHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHH
Confidence 9 7999999999995 44 899999987776532 2222222 222333444444444443 47999999999
Q ss_pred hhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCC
Q 009753 182 SLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 182 aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
++.+. |||+.+.++||+++++|++++||++.|+++
T Consensus 220 ~l~~v--------------------------------------------gg~~~~~~~ED~~l~~rl~~~G~~i~~~p~- 254 (420)
T PRK11204 220 ALHEV--------------------------------------------GYWSTDMITEDIDISWKLQLRGWDIRYEPR- 254 (420)
T ss_pred HHHHh--------------------------------------------CCCCCCcccchHHHHHHHHHcCCeEEeccc-
Confidence 99753 899999999999999999999999999987
Q ss_pred CCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhc
Q 009753 262 KPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKY 295 (526)
Q Consensus 262 ~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~ 295 (526)
+.++++.|+|++++++||.||++|.+|.++++.
T Consensus 255 -~~~~~~~p~t~~~~~~Qr~RW~~G~~~~l~~~~ 287 (420)
T PRK11204 255 -ALCWILMPETLKGLWKQRLRWAQGGAEVLLKNF 287 (420)
T ss_pred -cEEEeECcccHHHHHHHHHHHhcCHHHHHHHHH
Confidence 467899999999999999999999999998753
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.96 E-value=1.5e-27 Score=256.51 Aligned_cols=251 Identities=15% Similarity=0.104 Sum_probs=178.8
Q ss_pred cccCCCCc---eEEEEeCCCChHHHHH---hccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCC
Q 009753 32 VTKQDHQS---IVQIIVDGRDTNAVDK---EGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCD 105 (526)
Q Consensus 32 ~~~~~~~~---~v~VldD~~~~~~~~~---~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD 105 (526)
..+++||. +|.|+||+++|++.+. ..++.|++..+..++ .+|||+|+|.|++. +++|+|+++|||
T Consensus 71 l~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD 141 (439)
T TIGR03111 71 IYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSD 141 (439)
T ss_pred HHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCC
Confidence 45688886 5899999999885433 334567665554443 37899999999998 889999999999
Q ss_pred CCCCcHHHHHHHHHHhh-cccCCCcEEEEecCcccccC--Ccc-c---cchhhHHHHHHHH---H--HHH-hhcCCee-e
Q 009753 106 MYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNI--CKN-D---LYANSYLVVNQVE---L--AGI-GSYDAAL-Y 171 (526)
Q Consensus 106 ~~~~~p~~L~~~v~~f~-d~~~~~~va~VQ~pq~f~n~--~~~-d---~~~~~~~~f~~~~---~--~g~-d~~~~~~-~ 171 (526)
+++ +||+|++++..|. || +++.|++.+.-... ... . .+..... +++.. . +.. ...+..+ +
T Consensus 142 ~~~-~~d~L~~l~~~f~~~~----~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~l~~r~~~s~~~~~~~~ 215 (439)
T TIGR03111 142 GKL-HKDAIKNMVTRFENNP----DIHAMTGVILTDKELIEKTKGRFLKLIRRCE-YFEYAQAFLAGRNFESQVNSLFTL 215 (439)
T ss_pred CCc-ChHHHHHHHHHHHhCC----CeEEEEeEEecCchhhhhhcchhhhHhHHhH-HHHHHHHHHhhhHHHHhcCCeEEE
Confidence 999 8999999999996 44 67777654422110 000 0 0111111 11111 1 111 2223333 5
Q ss_pred eccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHh-
Q 009753 172 CGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQC- 250 (526)
Q Consensus 172 ~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~- 250 (526)
+|+++++||+++... |||+.++++||++++++++.
T Consensus 216 sGa~~~~Rr~~l~~v--------------------------------------------ggf~~~~i~ED~~l~~rl~~~ 251 (439)
T TIGR03111 216 SGAFSAFRRETILKT--------------------------------------------QLYNSETVGEDTDMTFQIREL 251 (439)
T ss_pred ccHHHhhhHHHHHHh--------------------------------------------CCCCCCCcCccHHHHHHHHHh
Confidence 788899999999753 89999999999999999975
Q ss_pred CCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccccCCcchhhhhhhhhhhhhhhhHHHHHHHH
Q 009753 251 RGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYV 330 (526)
Q Consensus 251 ~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~ 330 (526)
.|+|+.|+++ +.++.++|+|++++++||.||++|.+|++....++.. .++.++.++..+......+...+|.+++.
T Consensus 252 ~g~kv~~~~~--a~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (439)
T TIGR03111 252 LDGKVYLCEN--AIFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFESAN--KSIKGFFSNFMVRRIMYDHTFAFPRMIWY 327 (439)
T ss_pred cCCeEEECCC--CEEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhhhh--hchhhhhhHHHHHHHHhhHhhHHHHHHHH
Confidence 6999999987 5778999999999999999999999999976544332 23455666655544444455577888888
Q ss_pred HHHHHHHHhCCcccc
Q 009753 331 IVPPLCLGHGISLFP 345 (526)
Q Consensus 331 ~~P~l~l~~g~~~~~ 345 (526)
++++++.++|.++..
T Consensus 328 ~~~~~~~~~~~~~~~ 342 (439)
T TIGR03111 328 FAMIFLIFLGYPVKL 342 (439)
T ss_pred HHHHHHHHhccHHHH
Confidence 888888888765543
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.96 E-value=1.3e-26 Score=251.27 Aligned_cols=235 Identities=18% Similarity=0.181 Sum_probs=164.0
Q ss_pred ccCCCCc-eEEEEeCCCChHH---HHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHcc--ccCCC---cEEEEeC
Q 009753 33 TKQDHQS-IVQIIVDGRDTNA---VDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSS--VISNG---PVILNLD 103 (526)
Q Consensus 33 ~~~~~~~-~v~VldD~~~~~~---~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~--~~s~~---~~i~ilD 103 (526)
.++|||. +|.|+||+++|++ +++...++|+++.+.- ++++ ..+||+|||++++.+. ....| |+++++|
T Consensus 90 ~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv~-~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~D 166 (504)
T PRK14716 90 ATLDYENYRIFVGTYPNDPATLREVDRLAARYPRVHLVIV-PHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHD 166 (504)
T ss_pred HcCCCCCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEEe-CCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEc
Confidence 4578886 6999998888773 3444567888775552 2222 3689999999998631 11234 9999999
Q ss_pred CCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccch----hhHHHHHHHHHHHHhhcCCee-eeccceeE
Q 009753 104 CDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYA----NSYLVVNQVELAGIGSYDAAL-YCGTGCFH 178 (526)
Q Consensus 104 aD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~ 178 (526)
||+++ +|++|+.....+.| .++||.|....+.+.+...+ .+....+...+..++.+++++ ++|+|++|
T Consensus 167 AD~~v-~Pd~Lr~~~~~~~~------~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~af 239 (504)
T PRK14716 167 AEDVI-HPLELRLYNYLLPR------HDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAF 239 (504)
T ss_pred CCCCc-CccHHHHHHhhcCC------CCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEe
Confidence 99999 89999976655543 47899998765543322222 222222333456778888775 68999999
Q ss_pred ehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCcccccc-CCCCCCccchHHHHHHHHhCCCeEEE
Q 009753 179 RRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM-GLVYGCAAEDVVTGLTIQCRGWKSMY 257 (526)
Q Consensus 179 RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~g-G~~~~svtED~~t~~rl~~~Gwrs~y 257 (526)
||++|+.+ .++. .| +|+.+++|||+++|++++.+|||++|
T Consensus 240 RR~aLe~l-----------------------~~~~----------------GG~~fd~~sLTED~dLglRL~~~G~rv~y 280 (504)
T PRK14716 240 SRRALERL-----------------------AAER----------------GGQPFDSDSLTEDYDIGLRLKRAGFRQIF 280 (504)
T ss_pred EHHHHHHH-----------------------Hhhc----------------CCCCCCCCCcchHHHHHHHHHHCCCEEEE
Confidence 99999732 1110 13 39999999999999999999999999
Q ss_pred eCCCC-------------CceeeccCCCHHHHHHHHhhhhhhh-HHHHHhhc--cccccccCCcchhhhhhhhhhhh
Q 009753 258 FKPNK-------------PAFLGVAPVTLDIALVQMKRWSEGM-FQIFLSKY--CPFIYGHGKIKFGAQMGYCNYLL 318 (526)
Q Consensus 258 ~~~~~-------------~~~~g~aP~~l~~~~~Qr~RWa~G~-lqi~~~~~--~p~~~~~~~l~~~qrl~y~~~~~ 318 (526)
++... .++++++|+|++++++||.||+.|. +|...+.- .++. .+.+.+++|.+.+...+
T Consensus 281 ~p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 281 VRVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred ecccccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHHHH
Confidence 98741 1245889999999999999999995 78765320 1111 24466677777665543
No 20
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.94 E-value=2.6e-25 Score=250.04 Aligned_cols=209 Identities=17% Similarity=0.236 Sum_probs=151.9
Q ss_pred cCCCCc-eEEEEeCCCChH---HHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHcccc-----CCCcEEEEeCC
Q 009753 34 KQDHQS-IVQIIVDGRDTN---AVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVI-----SNGPVILNLDC 104 (526)
Q Consensus 34 ~~~~~~-~v~VldD~~~~~---~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~-----s~~~~i~ilDa 104 (526)
++|||. +|+|++|.++++ .+++...++|+++.+..++ ++ .++||+|||++++.+... ...+.++++||
T Consensus 88 ~ldYP~~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~-~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DA 164 (727)
T PRK11234 88 TLDYENYHIFVGTYPNDPATQADVDAVCARFPNVHKVVCAR-PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDA 164 (727)
T ss_pred hCCCCCeEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCC-CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcC
Confidence 689996 688887766665 3455556788876554433 22 368999999999985211 23467889999
Q ss_pred CCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccch----hhHHHHHHHHHHHHhhcCCee-eeccceeE-
Q 009753 105 DMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYA----NSYLVVNQVELAGIGSYDAAL-YCGTGCFH- 178 (526)
Q Consensus 105 D~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~- 178 (526)
|.++ +|++|+ .+.++.++ + ++||.|....+.+.+...+ .+....+...+++++.+++++ +.|+|++|
T Consensus 165 D~~v-~pd~L~-~~~~l~~~----~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~ 237 (727)
T PRK11234 165 EDVI-SPMELR-LFNYLVER----K-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFS 237 (727)
T ss_pred CCCC-ChhHHH-HHHhhcCC----C-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEe
Confidence 9999 899998 67788765 4 8999996633322222222 333334446678899997765 68999999
Q ss_pred eh--hhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEE
Q 009753 179 RR--ESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSM 256 (526)
Q Consensus 179 RR--~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~ 256 (526)
|| ++|.+. |...+|+.+++|||+++|++|+.+||+++
T Consensus 238 Rr~l~al~~~-----------------------------------------ggg~~~~~~~lTED~dlg~rL~~~G~~v~ 276 (727)
T PRK11234 238 RRAVTALLED-----------------------------------------GDGIAFDVQSLTEDYDIGFRLKEKGMREI 276 (727)
T ss_pred cccHHHHHHh-----------------------------------------cCCCCcCCCcchHHHHHHHHHHHCCCEEE
Confidence 55 345431 00016999999999999999999999999
Q ss_pred EeCCCC---------------------CceeeccCCCHHHHHHHHhhhhhh-hHHHHHh
Q 009753 257 YFKPNK---------------------PAFLGVAPVTLDIALVQMKRWSEG-MFQIFLS 293 (526)
Q Consensus 257 y~~~~~---------------------~~~~g~aP~~l~~~~~Qr~RWa~G-~lqi~~~ 293 (526)
|++.+. .+++++.|+|++++++||.||.+| .+|.+..
T Consensus 277 f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~~ 335 (727)
T PRK11234 277 FVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFKT 335 (727)
T ss_pred EcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHHH
Confidence 998221 347888999999999999999999 6887643
No 21
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.93 E-value=2.2e-25 Score=218.14 Aligned_cols=194 Identities=22% Similarity=0.301 Sum_probs=147.3
Q ss_pred ccCCCCc---eEEEEeCCCChHHHHHhc-------cCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEe
Q 009753 33 TKQDHQS---IVQIIVDGRDTNAVDKEG-------CQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNL 102 (526)
Q Consensus 33 ~~~~~~~---~v~VldD~~~~~~~~~~~-------~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~il 102 (526)
..++||. +|.|+|| ++|++.+... ...+.+.++.+.++ .++|++|+|.|++. +++|+|+++
T Consensus 24 ~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~ 94 (232)
T cd06437 24 CALDYPKDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADR----TGYKAGALAEGMKV----AKGEYVAIF 94 (232)
T ss_pred HhcCCCccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCC----CCCchHHHHHHHHh----CCCCEEEEE
Confidence 3577774 6778888 5554322211 12466888887765 46799999999998 899999999
Q ss_pred CCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhh----HHHHHHHHHHHHhhcCCee-eecccee
Q 009753 103 DCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS----YLVVNQVELAGIGSYDAAL-YCGTGCF 177 (526)
Q Consensus 103 DaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~----~~~f~~~~~~g~d~~~~~~-~~Gtg~~ 177 (526)
|||+++ +|++|+++..++.|+ ++++||++..+.|.+.+ .+... ....+...+.+....+..+ ++|++++
T Consensus 95 DaD~~~-~~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 168 (232)
T cd06437 95 DADFVP-PPDFLQKTPPYFADP----KLGFVQTRWGHINANYS-LLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGV 168 (232)
T ss_pred cCCCCC-ChHHHHHhhhhhcCC----CeEEEecceeeEcCCCc-hhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhh
Confidence 999999 799999988877665 79999987766554332 11111 1123334444444444433 5899999
Q ss_pred EehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEE
Q 009753 178 HRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMY 257 (526)
Q Consensus 178 ~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y 257 (526)
+||+++..+ |||+..+..||++++.|++.+||++.|
T Consensus 169 ~rr~~~~~v--------------------------------------------gg~~~~~~~ED~~l~~rl~~~G~~~~~ 204 (232)
T cd06437 169 WRKECIEDA--------------------------------------------GGWNHDTLTEDLDLSYRAQLKGWKFVY 204 (232)
T ss_pred hhHHHHHHh--------------------------------------------CCCCCCcchhhHHHHHHHHHCCCeEEE
Confidence 999999753 889988899999999999999999999
Q ss_pred eCCCCCceeeccCCCHHHHHHHHhhhhhhh
Q 009753 258 FKPNKPAFLGVAPVTLDIALVQMKRWSEGM 287 (526)
Q Consensus 258 ~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 287 (526)
+++. .++...|+|++++++||+||++|.
T Consensus 205 ~~~~--~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 205 LDDV--VVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred eccc--eeeeeCCcCHHHHHHHHHHhccCC
Confidence 9874 678999999999999999999983
No 22
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.93 E-value=4.2e-25 Score=214.74 Aligned_cols=200 Identities=31% Similarity=0.478 Sum_probs=161.3
Q ss_pred cccCCCCc---eEEEEeCCCChHHHH---HhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCC
Q 009753 32 VTKQDHQS---IVQIIVDGRDTNAVD---KEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCD 105 (526)
Q Consensus 32 ~~~~~~~~---~v~VldD~~~~~~~~---~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD 105 (526)
...+++|. +|.|+||+++|++.+ ..+... +++++.++++ .++|+||+|.|++. +++|+|+++|+|
T Consensus 24 l~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D 94 (234)
T cd06421 24 ALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY-GYRYLTRPDN----RHAKAGNLNNALAH----TTGDFVAILDAD 94 (234)
T ss_pred HHhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc-CceEEEeCCC----CCCcHHHHHHHHHh----CCCCEEEEEccc
Confidence 34577886 899999999987433 333222 4677777765 57899999999998 799999999999
Q ss_pred CCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccc----cchhhHHHHHHHHHHHHhhcCCeeeeccceeEehh
Q 009753 106 MYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKND----LYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRE 181 (526)
Q Consensus 106 ~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d----~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~ 181 (526)
.++ +|++|.+++..|.+ +++++.|++++.+.+.+..+ .+......++..+..+...++...++|+++++||+
T Consensus 95 ~~~-~~~~l~~l~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~ 170 (234)
T cd06421 95 HVP-TPDFLRRTLGYFLD---DPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRRE 170 (234)
T ss_pred cCc-CccHHHHHHHHHhc---CCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHH
Confidence 999 79999999999975 23799999998887654431 12223344555566666666677889999999999
Q ss_pred hhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCC
Q 009753 182 SLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 182 aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
++... |||+...+.||++++.+++++||++.|+++.
T Consensus 171 ~~~~i--------------------------------------------g~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~ 206 (234)
T cd06421 171 ALDEI--------------------------------------------GGFPTDSVTEDLATSLRLHAKGWRSVYVPEP 206 (234)
T ss_pred HHHHh--------------------------------------------CCCCccceeccHHHHHHHHHcCceEEEecCc
Confidence 99753 7888888999999999999999999999985
Q ss_pred CCceeeccCCCHHHHHHHHhhhhhhhHHH
Q 009753 262 KPAFLGVAPVTLDIALVQMKRWSEGMFQI 290 (526)
Q Consensus 262 ~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi 290 (526)
.+++..|.+++.+++||.||.+|.+|+
T Consensus 207 --~~~~~~~~~~~~~~~q~~rw~~~~~~~ 233 (234)
T cd06421 207 --LAAGLAPETLAAYIKQRLRWARGMLQI 233 (234)
T ss_pred --cccccCCccHHHHHHHHHHHhcCCeee
Confidence 567999999999999999999999885
No 23
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.93 E-value=1.4e-24 Score=212.41 Aligned_cols=205 Identities=23% Similarity=0.329 Sum_probs=152.8
Q ss_pred cccCCCC-ceEEEEeCCCChHHH----HHhccC-CCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCC
Q 009753 32 VTKQDHQ-SIVQIIVDGRDTNAV----DKEGCQ-LPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCD 105 (526)
Q Consensus 32 ~~~~~~~-~~v~VldD~~~~~~~----~~~~~~-~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD 105 (526)
..+++|| .+|.|+||+++|... ++...+ -+++.++..+++ .++|++|+|.|++.+. .++|+|+++|+|
T Consensus 21 l~~q~~~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D 94 (236)
T cd06435 21 LAALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPL----PGAKAGALNYALERTA--PDAEIIAVIDAD 94 (236)
T ss_pred HHhCCCCCcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCC----CCCchHHHHHHHHhcC--CCCCEEEEEcCC
Confidence 3456676 479999999987632 122112 246777777665 4679999999999842 358999999999
Q ss_pred CCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhh----HHHHHHHHHHHHhhcCCeeeeccceeEehh
Q 009753 106 MYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS----YLVVNQVELAGIGSYDAALYCGTGCFHRRE 181 (526)
Q Consensus 106 ~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~----~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~ 181 (526)
..+ +|++|.+++..|.++ +++.|+++..+.+... .++... ...++......+...+..++.|+++++||+
T Consensus 95 ~~~-~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~ 168 (236)
T cd06435 95 YQV-EPDWLKRLVPIFDDP----RVGFVQAPQDYRDGEE-SLFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRS 168 (236)
T ss_pred CCc-CHHHHHHHHHHhcCC----CeeEEecCccccCCCc-cHHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHH
Confidence 999 799999999998755 7999999876654322 122111 111111112222333445678999999999
Q ss_pred hhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCC
Q 009753 182 SLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 182 aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
++..+ |||+.....||+++++|++.+|||+.|+++.
T Consensus 169 ~~~~i--------------------------------------------Ggf~~~~~~eD~dl~~r~~~~G~~~~~~~~~ 204 (236)
T cd06435 169 ALDDV--------------------------------------------GGWDEWCITEDSELGLRMHEAGYIGVYVAQS 204 (236)
T ss_pred HHHHh--------------------------------------------CCCCCccccchHHHHHHHHHCCcEEEEcchh
Confidence 99753 7899888999999999999999999999874
Q ss_pred CCceeeccCCCHHHHHHHHhhhhhhhHHHHHhh
Q 009753 262 KPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSK 294 (526)
Q Consensus 262 ~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~ 294 (526)
..+...|+++.++++||.||++|++|++.++
T Consensus 205 --~~~~~~~~~~~~~~~q~~rw~~g~~~~~~~~ 235 (236)
T cd06435 205 --YGHGLIPDTFEAFKKQRFRWAYGAVQILKKH 235 (236)
T ss_pred --hccCcCcccHHHHHHHHHHHhcchhhhhhcc
Confidence 4578999999999999999999999998754
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.92 E-value=2.6e-24 Score=212.30 Aligned_cols=204 Identities=21% Similarity=0.275 Sum_probs=154.9
Q ss_pred cccCCCCc---eEEEEeCCCChHHHHHh---cc-CCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCC
Q 009753 32 VTKQDHQS---IVQIIVDGRDTNAVDKE---GC-QLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDC 104 (526)
Q Consensus 32 ~~~~~~~~---~v~VldD~~~~~~~~~~---~~-~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDa 104 (526)
..+++||. +|.|+||+++|++.+.. +. ...+++++.+.+ ..+|++|+|.|++. ++||+|+++|+
T Consensus 23 l~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~Da 93 (241)
T cd06427 23 LSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQ-----PRTKPKACNYALAF----ARGEYVVIYDA 93 (241)
T ss_pred HHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCC-----CCchHHHHHHHHHh----cCCCEEEEEcC
Confidence 34567774 68888999988754432 21 122344444333 36899999999998 89999999999
Q ss_pred CCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCcccc---chhhHHHHHHHHHHHHhhcCCee-eeccceeEeh
Q 009753 105 DMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDL---YANSYLVVNQVELAGIGSYDAAL-YCGTGCFHRR 180 (526)
Q Consensus 105 D~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~---~~~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR 180 (526)
|+.+ +|++|.+++.+|.+ .++++++||++..+.|...+-. +..+....++...++....+.+. ++|+++++||
T Consensus 94 D~~~-~~~~l~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr 170 (241)
T cd06427 94 EDAP-DPDQLKKAVAAFAR--LDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRT 170 (241)
T ss_pred CCCC-ChHHHHHHHHHHHh--cCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhH
Confidence 9999 79999999999963 2348999999887776432211 11122233445556666666554 5789999999
Q ss_pred hhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCC
Q 009753 181 ESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKP 260 (526)
Q Consensus 181 ~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~ 260 (526)
+++..+ |||+....+||+++++|++.+|||+.+++.
T Consensus 171 ~~~~~v--------------------------------------------gg~~~~~~~eD~~l~~rl~~~G~r~~~~~~ 206 (241)
T cd06427 171 DVLREL--------------------------------------------GGWDPFNVTEDADLGLRLARAGYRTGVLNS 206 (241)
T ss_pred HHHHHc--------------------------------------------CCCCcccchhhHHHHHHHHHCCceEEEecc
Confidence 999764 889888899999999999999999999975
Q ss_pred CCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhh
Q 009753 261 NKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSK 294 (526)
Q Consensus 261 ~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~ 294 (526)
.++++.|+|++++++||.||++|.+|++..+
T Consensus 207 ---~~~~~~~~~~~~~~~q~~Rw~~g~~~~~~~~ 237 (241)
T cd06427 207 ---TTLEEANNALGNWIRQRSRWIKGYMQTWLVH 237 (241)
T ss_pred ---cccccCcHhHHHHHHHHHHHhccHHHHHHHH
Confidence 3468999999999999999999999998753
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.90 E-value=2.3e-24 Score=209.51 Aligned_cols=194 Identities=26% Similarity=0.325 Sum_probs=123.8
Q ss_pred cCCCC-ceEEEEeCCCChHH---HHHhccCCCc--EEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC
Q 009753 34 KQDHQ-SIVQIIVDGRDTNA---VDKEGCQLPT--LVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY 107 (526)
Q Consensus 34 ~~~~~-~~v~VldD~~~~~~---~~~~~~~~p~--v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~ 107 (526)
+++|| .+|.|+||++++++ +++...++|. +.++.++++++ .++|++|+|.+++. .++|+|+++|+|.+
T Consensus 25 ~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~ 98 (228)
T PF13641_consen 25 AQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTV 98 (228)
T ss_dssp TSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEE
T ss_pred cCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcE
Confidence 45554 56899999988763 3333334554 58888876531 24799999999998 78999999999999
Q ss_pred CCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHH----HHHHHHhhcCCeeeeccceeEehhhh
Q 009753 108 ANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQ----VELAGIGSYDAALYCGTGCFHRRESL 183 (526)
Q Consensus 108 ~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~----~~~~g~d~~~~~~~~Gtg~~~RR~aL 183 (526)
+ +|++|++++.+|.+| ++++||++..+.+ ..+ .+......++. ....+....+..+++|+++++||+++
T Consensus 99 ~-~p~~l~~~~~~~~~~----~~~~v~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~ 171 (228)
T PF13641_consen 99 L-DPDWLERLLAAFADP----GVGAVGGPVFPDN-DRN-WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSAL 171 (228)
T ss_dssp E--CHHHHHHHHHHHBS----S--EEEEEEEETT-CCC-EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHH
T ss_pred E-CHHHHHHHHHHHHhC----CCCeEeeeEeecC-CCC-HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHH
Confidence 9 799999999999766 7999998886654 222 22211111111 11233344455667899999999999
Q ss_pred cCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCCCC
Q 009753 184 SGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKP 263 (526)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~ 263 (526)
.. .|||+.....||.+++++++++||++.|+++ +
T Consensus 172 ~~--------------------------------------------~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~ 205 (228)
T PF13641_consen 172 EE--------------------------------------------VGGFDPFILGEDFDLCLRLRAAGWRIVYAPD--A 205 (228)
T ss_dssp HH--------------------------------------------H-S--SSSSSHHHHHHHHHHHTT--EEEEEE--E
T ss_pred HH--------------------------------------------hCCCCCCCcccHHHHHHHHHHCCCcEEEECC--c
Confidence 75 2789988889999999999999999999987 4
Q ss_pred ceeeccCCCHHHHHHHHhhhhhh
Q 009753 264 AFLGVAPVTLDIALVQMKRWSEG 286 (526)
Q Consensus 264 ~~~g~aP~~l~~~~~Qr~RWa~G 286 (526)
.++...|.+++++++||.||++|
T Consensus 206 ~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 206 LVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp EEEE--SSSTHHHHHHHHHHH--
T ss_pred EEEEeCCCCHHHHHHHHhccCcC
Confidence 67899999999999999999987
No 26
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.88 E-value=7.6e-21 Score=211.91 Aligned_cols=211 Identities=17% Similarity=0.143 Sum_probs=153.1
Q ss_pred ccCCCCc-eEEE---EeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHcc---ccCCCcE--EEEeC
Q 009753 33 TKQDHQS-IVQI---IVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSS---VISNGPV--ILNLD 103 (526)
Q Consensus 33 ~~~~~~~-~v~V---ldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~---~~s~~~~--i~ilD 103 (526)
.+.|||. +|.| .||+.+.+.++....++|+++.|..+++ ...+||.|||++++..- ..+.++| ++++|
T Consensus 95 ~~ldYp~~~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~~~~---gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~D 171 (703)
T PRK15489 95 ATLDYRRYVIFVGTYPNDAETITEVERMRRRYKRLVRVEVPHD---GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHD 171 (703)
T ss_pred hcCCCCCeEEEEEecCCCccHHHHHHHHhccCCcEEEEEcCCC---CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEc
Confidence 4679996 4666 4777666556666667898888877654 24789999999998741 1123344 99999
Q ss_pred CCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccc----cchhhHHHHHHHHHHHHhhcCCee-eeccceeE
Q 009753 104 CDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKND----LYANSYLVVNQVELAGIGSYDAAL-YCGTGCFH 178 (526)
Q Consensus 104 aD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d----~~~~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~ 178 (526)
||.+| +|++|+.. .++.+. -.+||.|..-...+... .|..|....++..++++..+++++ .+|||++|
T Consensus 172 AEd~~-~P~~L~~~-~~~~~~-----~~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~f 244 (703)
T PRK15489 172 SEDVL-HPLELKYF-NYLLPR-----KDLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCF 244 (703)
T ss_pred CCCCC-ChhHHHHH-HhhcCC-----cceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceee
Confidence 99999 89999764 566543 14689874311111112 244566777788889999999887 58999999
Q ss_pred ehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEe
Q 009753 179 RRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYF 258 (526)
Q Consensus 179 RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~ 258 (526)
||++|..+ +++. . -.+|+.+|+|||+++|+||+++|||+.|+
T Consensus 245 rr~aL~~l-----------------------~~~g------------g---~~~~n~~sLTED~Dlg~RL~~~G~r~~f~ 286 (703)
T PRK15489 245 SRRALLAL-----------------------MKER------------G---NQPFNTSSLTEDYDFSFRLAELGMQEIFV 286 (703)
T ss_pred eHHHHHHH-----------------------HHhc------------C---CCCCCCCCchHhHHHHHHHHHCCCceEEE
Confidence 99998632 1110 0 02588899999999999999999999993
Q ss_pred CC---------------------CCCceeeccCCCHHHHHHHHhhhhhhhH-HHH
Q 009753 259 KP---------------------NKPAFLGVAPVTLDIALVQMKRWSEGMF-QIF 291 (526)
Q Consensus 259 ~~---------------------~~~~~~g~aP~~l~~~~~Qr~RWa~G~l-qi~ 291 (526)
.- ...+.++..|.|+++.++||.||..|-. |-.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 287 RFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred EEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 21 1245678899999999999999999987 654
No 27
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.87 E-value=2.9e-20 Score=196.04 Aligned_cols=197 Identities=17% Similarity=0.206 Sum_probs=143.6
Q ss_pred cccCCCCc-eEEEEeCCCChHH---HHHhccCCCc--EEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCC
Q 009753 32 VTKQDHQS-IVQIIVDGRDTNA---VDKEGCQLPT--LVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCD 105 (526)
Q Consensus 32 ~~~~~~~~-~v~VldD~~~~~~---~~~~~~~~p~--v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD 105 (526)
..+||||. +|.|+||+++|.+ +++..++.|+ ++++.+++++| .++|++|+|++++. +++|+++++|||
T Consensus 63 l~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD 136 (373)
T TIGR03472 63 FCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSD 136 (373)
T ss_pred HHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCC
Confidence 56889985 6888899888763 3344445664 67776655432 45799999999988 899999999999
Q ss_pred CCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHH-----HHHHHHHHHhhcCC-eeeeccceeEe
Q 009753 106 MYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLV-----VNQVELAGIGSYDA-ALYCGTGCFHR 179 (526)
Q Consensus 106 ~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~-----f~~~~~~g~d~~~~-~~~~Gtg~~~R 179 (526)
.++ +||+|++++..|.|| +++.|+++....+ .+......... ++..... .+..+. .++.|++.++|
T Consensus 137 ~~~-~p~~L~~lv~~~~~~----~v~~V~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~a~R 208 (373)
T TIGR03472 137 ISV-GPDYLRQVVAPLADP----DVGLVTCLYRGRP--VPGFWSRLGAMGINHNFLPSVMV-ARALGRARFCFGATMALR 208 (373)
T ss_pred CCc-ChhHHHHHHHHhcCC----CcceEeccccCCC--CCCHHHHHHHHHhhhhhhHHHHH-HHhccCCccccChhhhee
Confidence 999 799999999999876 7899998643221 11111111111 1111111 122232 34679999999
Q ss_pred hhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCC--CCccchHHHHHHHHhCCCeEEE
Q 009753 180 RESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVY--GCAAEDVVTGLTIQCRGWKSMY 257 (526)
Q Consensus 180 R~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~--~svtED~~t~~rl~~~Gwrs~y 257 (526)
|++++.+ |||+. ++++||++++.+++.+||++.|
T Consensus 209 R~~l~~i--------------------------------------------GGf~~~~~~~~ED~~l~~~i~~~G~~v~~ 244 (373)
T TIGR03472 209 RATLEAI--------------------------------------------GGLAALAHHLADDYWLGELVRALGLRVVL 244 (373)
T ss_pred HHHHHHc--------------------------------------------CChHHhcccchHHHHHHHHHHHcCCeEEe
Confidence 9999864 88874 5789999999999999999999
Q ss_pred eCCCCCceeeccCCCHHHHHHHHhhhhhhhH
Q 009753 258 FKPNKPAFLGVAPVTLDIALVQMKRWSEGMF 288 (526)
Q Consensus 258 ~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~l 288 (526)
++.. ......|+|++++++||.||++..-
T Consensus 245 ~~~~--v~~~~~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 245 APVV--VDTDVHETSFATLLAHELRWSRTIR 273 (373)
T ss_pred cchh--hhcCCCccCHHHHHHHHHHHHhhhh
Confidence 8763 4457778999999999999986554
No 28
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.87 E-value=8.4e-22 Score=195.61 Aligned_cols=197 Identities=21% Similarity=0.091 Sum_probs=131.1
Q ss_pred cccCCCC-----------ceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHH-------HHHHHHHHcccc
Q 009753 32 VTKQDHQ-----------SIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAG-------AMNALIRVSSVI 93 (526)
Q Consensus 32 ~~~~~~~-----------~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAG-------aLN~~l~~~~~~ 93 (526)
..++||| -+|.|+|||++| +| .+|+. ++|.++..
T Consensus 20 v~~q~y~~~~~~~~~~~~~evivv~Dgs~d-------------------~~-----~gk~~~~~~~~~~~~~~~~~---- 71 (244)
T cd04190 20 ILKNDYPFCARGGDSWKKIVVCVIFDGAIK-------------------KN-----RGKRDSQLWFFNYFCRVLFP---- 71 (244)
T ss_pred HHHhhHHHHhcCCCCccEEEEEEEeCCccc-------------------cc-----CcchHHHHHHHHHHHHHhhc----
Confidence 4567776 268899999997 22 23443 34555554
Q ss_pred CCCcEEEEeCCCCCCCcHHHHHHHHHHhh-cccCCCcEEEEecCcccccCCccccchhhHHHHH----HHHHHHHhhcCC
Q 009753 94 SNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKNDLYANSYLVVN----QVELAGIGSYDA 168 (526)
Q Consensus 94 s~~~~i~ilDaD~~~~~p~~L~~~v~~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~----~~~~~g~d~~~~ 168 (526)
+++|+|+++|||+++ +|++|++++.+|. || +++.|++.+...|...+ .+...+..-| .......+.++.
T Consensus 72 a~~e~i~~~DaD~~~-~~~~l~~l~~~~~~~p----~vg~v~g~~~~~~~~~~-~~~~~q~~ey~~~~~~~~~~~s~~g~ 145 (244)
T cd04190 72 DDPEFILLVDADTKF-DPDSIVQLYKAMDKDP----EIGGVCGEIHPMGKKQG-PLVMYQVFEYAISHWLDKAFESVFGF 145 (244)
T ss_pred CCCCEEEEECCCCcC-CHhHHHHHHHHHHhCC----CEEEEEeeeEEcCCcch-hHHHhHheehhhhhhhcccHHHcCCc
Confidence 799999999999999 7999999999984 55 79999998877664322 2222121111 111223344454
Q ss_pred e-eeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHH
Q 009753 169 A-LYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLT 247 (526)
Q Consensus 169 ~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~r 247 (526)
. ++.|++++||+++|.+...... ....++|..++.-. ..+....+++||.+++++
T Consensus 146 ~~~~~G~~~~~R~~~l~~~~~~~~-----------------------~~~~~~~~~~~~~~-~~~~~~~~~~ED~~l~~~ 201 (244)
T cd04190 146 VTCLPGCFSMYRIEALKGDNGGKG-----------------------PLLDYAYLTNTVDS-LHKKNNLDLGEDRILCTL 201 (244)
T ss_pred eEECCCceEEEEehhhcCCccccc-----------------------cchhhccccCcccc-hHHHHHHhHhcccceeHH
Confidence 3 4689999999999976410000 00000000000000 011223468999999999
Q ss_pred HHhCCCeEEE--eCCCCCceeeccCCCHHHHHHHHhhhhhhhH
Q 009753 248 IQCRGWKSMY--FKPNKPAFLGVAPVTLDIALVQMKRWSEGMF 288 (526)
Q Consensus 248 l~~~Gwrs~y--~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~l 288 (526)
|..+||++.| +++ +.+++++|+|++++++||.||++|++
T Consensus 202 l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~ 242 (244)
T cd04190 202 LLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTI 242 (244)
T ss_pred HhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhcccc
Confidence 9999999999 776 46689999999999999999999986
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.86 E-value=7.4e-21 Score=183.77 Aligned_cols=197 Identities=18% Similarity=0.161 Sum_probs=144.3
Q ss_pred cccCCCCc---eEEEEeCCCChHHHHHh----ccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCC
Q 009753 32 VTKQDHQS---IVQIIVDGRDTNAVDKE----GCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDC 104 (526)
Q Consensus 32 ~~~~~~~~---~v~VldD~~~~~~~~~~----~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDa 104 (526)
...|+||. +|.|+||+++|.+.+.. ....+++.++.++.. ...+|+.|+|.+++. +++|+|+++|+
T Consensus 19 l~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~~---~~~g~~~a~n~g~~~----~~~d~i~~~D~ 91 (229)
T cd04192 19 LSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSRV---SISGKKNALTTAIKA----AKGDWIVTTDA 91 (229)
T ss_pred HHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccCc---ccchhHHHHHHHHHH----hcCCEEEEECC
Confidence 34566765 79999999987743322 234567777776641 247899999999998 88999999999
Q ss_pred CCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchh--hHHH-HHHHHHHHHhhcCCe-eeeccceeEeh
Q 009753 105 DMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN--SYLV-VNQVELAGIGSYDAA-LYCGTGCFHRR 180 (526)
Q Consensus 105 D~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--~~~~-f~~~~~~g~d~~~~~-~~~Gtg~~~RR 180 (526)
|+++ +|++|++++..+.++ ..+.|+++..+.. .+..... .... .......+...++.+ .++|+++++||
T Consensus 92 D~~~-~~~~l~~l~~~~~~~----~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr 164 (229)
T cd04192 92 DCVV-PSNWLLTFVAFIQKE----QIGLVAGPVIYFK--GKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRK 164 (229)
T ss_pred Cccc-CHHHHHHHHHHhhcC----CCcEEeeeeeecC--CccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEH
Confidence 9999 799999999988654 4677887776552 1111111 1111 111222233334444 45799999999
Q ss_pred hhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCC--CCccchHHHHHHHHhCCC-eEEE
Q 009753 181 ESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVY--GCAAEDVVTGLTIQCRGW-KSMY 257 (526)
Q Consensus 181 ~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~--~svtED~~t~~rl~~~Gw-rs~y 257 (526)
+++..+ |||++ ...+||.++.++++++|| ++.|
T Consensus 165 ~~~~~~--------------------------------------------ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~ 200 (229)
T cd04192 165 EAFFEV--------------------------------------------GGFEGNDHIASGDDELLLAKVASKYPKVAY 200 (229)
T ss_pred HHHHHh--------------------------------------------cCCccccccccCCHHHHHHHHHhCCCCEEE
Confidence 999753 78875 367899999999999999 9999
Q ss_pred eCCCCCceeeccCCCHHHHHHHHhhhhhh
Q 009753 258 FKPNKPAFLGVAPVTLDIALVQMKRWSEG 286 (526)
Q Consensus 258 ~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 286 (526)
++.+...++...|.+++++++||+||++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 201 LKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred eeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 86655567899999999999999999987
No 30
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.85 E-value=1.5e-20 Score=183.30 Aligned_cols=202 Identities=18% Similarity=0.151 Sum_probs=142.2
Q ss_pred cCCCCceEEEEeCCCChHHHHHh--ccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcH
Q 009753 34 KQDHQSIVQIIVDGRDTNAVDKE--GCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDG 111 (526)
Q Consensus 34 ~~~~~~~v~VldD~~~~~~~~~~--~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p 111 (526)
+++ |.+|.|+||+++|+..+.. ....+.+.++. ++ +.+|++|+|.+++. +++|+|+++|+|..+ +|
T Consensus 25 ~q~-~~eiivvdd~s~d~~~~~l~~~~~~~~~~v~~-~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~-~~ 92 (235)
T cd06434 25 RQK-PLEIIVVTDGDDEPYLSILSQTVKYGGIFVIT-VP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVW-PP 92 (235)
T ss_pred hCC-CCEEEEEeCCCChHHHHHHHhhccCCcEEEEe-cC-----CCChHHHHHHHHHH----hCCCEEEEECCCcee-Ch
Confidence 344 7889999999998855442 23455565554 33 36899999999998 799999999999999 79
Q ss_pred HHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHH----HHHHHHhhcCCe-eeeccceeEehhhhcCC
Q 009753 112 DAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQ----VELAGIGSYDAA-LYCGTGCFHRRESLSGA 186 (526)
Q Consensus 112 ~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~----~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~ 186 (526)
++|++++..|.|+ +++.|++.+...+.+.+ .+......++. .........++. .+.|.+.++||+++...
T Consensus 93 ~~l~~l~~~~~~~----~v~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~ 167 (235)
T cd06434 93 NALPEMLKPFEDP----KVGGVGTNQRILRPRDS-KWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDF 167 (235)
T ss_pred hHHHHHHHhccCC----CEeEEcCceEeecCccc-HHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhh
Confidence 9999999999765 79999998877765321 22111111111 112233333433 35688889999999653
Q ss_pred CCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCCCCcee
Q 009753 187 KYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFL 266 (526)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~ 266 (526)
.+... ..+ ++ .+|+. ....||.+++.+++.+||+..|++.. ..+
T Consensus 168 ~~~~~-----------------~~~--------------~~--~~~~~-~~~~eD~~l~~~~~~~g~~~~~~~~~--~~~ 211 (235)
T cd06434 168 LFLEE-----------------FTN--------------ET--FMGRR-LNAGDDRFLTRYVLSHGYKTVYQYTS--EAY 211 (235)
T ss_pred hhHHH-----------------hhh--------------hh--hcCCC-CCcCchHHHHHHHHHCCCeEEEecCC--eEE
Confidence 11000 000 00 12332 36789999999999999999999874 456
Q ss_pred eccCCCHHHHHHHHhhhhhhhH
Q 009753 267 GVAPVTLDIALVQMKRWSEGMF 288 (526)
Q Consensus 267 g~aP~~l~~~~~Qr~RWa~G~l 288 (526)
...|.++.++++||.||++|..
T Consensus 212 ~~~~~~~~~~~~q~~Rw~~~~~ 233 (235)
T cd06434 212 TETPENYKKFLKQQLRWSRSNW 233 (235)
T ss_pred EEcchhHHHHHHHhhhhhhccc
Confidence 7899999999999999999974
No 31
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.85 E-value=9.5e-21 Score=181.13 Aligned_cols=164 Identities=20% Similarity=0.200 Sum_probs=131.3
Q ss_pred ccCCCC-ceEEEEeCCCChHHH---HHhccCCCc--EEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC
Q 009753 33 TKQDHQ-SIVQIIVDGRDTNAV---DKEGCQLPT--LVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM 106 (526)
Q Consensus 33 ~~~~~~-~~v~VldD~~~~~~~---~~~~~~~p~--v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~ 106 (526)
.+|+|| .+|.|+||+++|++. ++...+.|+ +.++..+++.| ..+|++|+|.|++. +++|+++++|+|+
T Consensus 24 ~~q~~~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~ 97 (196)
T cd02520 24 FQQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDI 97 (196)
T ss_pred HhccCCCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCc
Confidence 356666 478899999998743 334445664 45665554322 34689999999998 8899999999999
Q ss_pred CCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCC
Q 009753 107 YANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGA 186 (526)
Q Consensus 107 ~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~ 186 (526)
.+ +|++|++++..+.++ ++++|++. +..|+++++||+++..+
T Consensus 98 ~~-~~~~l~~l~~~~~~~----~~~~v~~~---------------------------------~~~g~~~~~r~~~~~~~ 139 (196)
T cd02520 98 SV-PPDYLRRMVAPLMDP----GVGLVTCL---------------------------------CAFGKSMALRREVLDAI 139 (196)
T ss_pred eE-ChhHHHHHHHHhhCC----CCCeEEee---------------------------------cccCceeeeEHHHHHhc
Confidence 99 799999999998765 67888754 46789999999999753
Q ss_pred CCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCC--CCccchHHHHHHHHhCCCeEEEeCCCCCc
Q 009753 187 KYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVY--GCAAEDVVTGLTIQCRGWKSMYFKPNKPA 264 (526)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~ 264 (526)
|||+. ..+.||+++++++..+||++.|+++. .
T Consensus 140 --------------------------------------------ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~~--~ 173 (196)
T cd02520 140 --------------------------------------------GGFEAFADYLAEDYFLGKLIWRLGYRVVLSPYV--V 173 (196)
T ss_pred --------------------------------------------cChHHHhHHHHHHHHHHHHHHHcCCeEEEcchh--e
Confidence 77864 35689999999999999999999874 5
Q ss_pred eeeccCCCHHHHHHHHhhhhhh
Q 009753 265 FLGVAPVTLDIALVQMKRWSEG 286 (526)
Q Consensus 265 ~~g~aP~~l~~~~~Qr~RWa~G 286 (526)
++...|.+++++++||.||++.
T Consensus 174 ~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 174 MQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred eccCCcccHHHHHHHHHHHhcc
Confidence 6789999999999999999863
No 32
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.83 E-value=1.1e-19 Score=172.92 Aligned_cols=137 Identities=24% Similarity=0.325 Sum_probs=112.2
Q ss_pred EEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHH----HHHHHHhhcCCe-eee
Q 009753 98 VILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQ----VELAGIGSYDAA-LYC 172 (526)
Q Consensus 98 ~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~----~~~~g~d~~~~~-~~~ 172 (526)
+|+++|||+.+ +||++++++.++.|| ++++||+|..++|. ++.+.+.+...+. ......+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~-~~d~l~~~~~~~~~~----~~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRL-PPDFLERLVAALEDP----KVDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCC-ChHHHHHHHHHHhCC----CceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 58999999999 699999999999866 79999999998642 3344444444442 122333445544 468
Q ss_pred ccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCC-CCCccchHHHHHHHHhC
Q 009753 173 GTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLV-YGCAAEDVVTGLTIQCR 251 (526)
Q Consensus 173 Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~-~~svtED~~t~~rl~~~ 251 (526)
|+|.++||+++.++ |||+ ..+++||+++++++.++
T Consensus 74 G~~~~~r~~~l~~v--------------------------------------------g~~~~~~~~~ED~~l~~~l~~~ 109 (193)
T PF13632_consen 74 GSGMLFRREALREV--------------------------------------------GGFDDPFSIGEDMDLGFRLRRA 109 (193)
T ss_pred CcceeeeHHHHHHh--------------------------------------------CcccccccccchHHHHHHHHHC
Confidence 99999999999753 7899 88999999999999999
Q ss_pred CCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhh
Q 009753 252 GWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGM 287 (526)
Q Consensus 252 Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 287 (526)
|||+.|+++. .+++++|.|+.++++||+||..|.
T Consensus 110 G~~~~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 110 GYRIVYVPDA--IVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred CCEEEEeccc--ceeeeCCCCHHHHHHHHHHHHhhh
Confidence 9999999884 568999999999999999999997
No 33
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=2.1e-17 Score=173.19 Aligned_cols=242 Identities=17% Similarity=0.208 Sum_probs=185.2
Q ss_pred CCceEEEEeCCCChHH--HH---------HhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCC
Q 009753 37 HQSIVQIIVDGRDTNA--VD---------KEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCD 105 (526)
Q Consensus 37 ~~~~v~VldD~~~~~~--~~---------~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD 105 (526)
+-..+.|+-|+.++++ ++ +. +..-++-|-.|.+| -+-||||+....|.-| +.+++++++|||
T Consensus 178 ~~FD~FVLSDs~dpdialAEq~a~~~l~~e~-~g~~~ifYRrRr~n----~~RKaGNIaDfcrRwG--~~Y~~MlVLDAD 250 (736)
T COG2943 178 EHFDFFVLSDSRDPDIALAEQKAWAELCREL-GGEGNIFYRRRRRN----VKRKAGNIADFCRRWG--SAYSYMLVLDAD 250 (736)
T ss_pred ccceEEEEcCCCCchhhhhHHHHHHHHHHHh-CCCCceeeehHhhh----hcccccCHHHHHHHhC--cccceEEEeecc
Confidence 3456899999999883 22 22 23567888777776 5789999999999977 899999999999
Q ss_pred CCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHH---HHHH-HHHHHHhhcCC--eeeeccceeEe
Q 009753 106 MYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYL---VVNQ-VELAGIGSYDA--ALYCGTGCFHR 179 (526)
Q Consensus 106 ~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~---~f~~-~~~~g~d~~~~--~~~~Gtg~~~R 179 (526)
+++ .+|.+-+++..|+ .+|+.|.+||-..-.|.+ ..|+..+. -.|. +...|...|++ .-|-|.|+++|
T Consensus 251 SvM-tgd~lvrLv~~ME---~~P~aGlIQt~P~~~gg~--TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIR 324 (736)
T COG2943 251 SVM-TGDCLVRLVRLME---ANPDAGLIQTSPKASGGD--TLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIR 324 (736)
T ss_pred ccc-CchHHHHHHHHHh---hCCCCceeecchhhcCcc--hHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceee
Confidence 999 6999999999997 456899999877665543 45654332 2343 55678888875 36899999999
Q ss_pred hhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeC
Q 009753 180 RESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFK 259 (526)
Q Consensus 180 R~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~ 259 (526)
.+++.+ ||....- -| ++.|..+.++.|+..+-.|.+.||-+--.+
T Consensus 325 t~aF~~--------------------------------hcgLp~L--pG-~~pFgG~ilSHDfvEAALmRRaGW~v~ia~ 369 (736)
T COG2943 325 TKAFIE--------------------------------HCGLPPL--PG-RGPFGGHILSHDFVEAALMRRAGWGVWIAY 369 (736)
T ss_pred chhhHH--------------------------------hcCCCCC--CC-CCCCCccccchHHHHHHHHhhcCceEEEec
Confidence 999954 4555422 22 256877889999999999999999875444
Q ss_pred CCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccccCCcchhhhhhhhhhhhhhhhHHHHHHHHHHH
Q 009753 260 PNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVP 333 (526)
Q Consensus 260 ~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P 333 (526)
.+...++|.|.|+.+.++.-.|||+|++|-+ +++ +.+++.+..|+.++.....++++...++++++-
T Consensus 370 -dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~-----rl~-~~~GlHwvsR~h~~tGVmsYlsaPlWfl~ll~g 436 (736)
T COG2943 370 -DLDGSYEELPPNLLDELKRDRRWCHGNLQHF-----RLF-LVKGLHWVSRAHFLTGVMSYLSAPLWFLFLLLG 436 (736)
T ss_pred -cCCCchhhCCchHHHHHhhhhHhhhcchhhc-----eee-ccCCccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 4578899999999999999999999999954 333 468999999999998877766555554444433
No 34
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.79 E-value=2.7e-18 Score=169.44 Aligned_cols=190 Identities=16% Similarity=0.143 Sum_probs=137.0
Q ss_pred cCCCCc---eEEEEeCCCChHHHH---HhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC
Q 009753 34 KQDHQS---IVQIIVDGRDTNAVD---KEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY 107 (526)
Q Consensus 34 ~~~~~~---~v~VldD~~~~~~~~---~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~ 107 (526)
.+++|. +|.|+||+++|++.+ +.... ++.++..+++ .+|++|+|.+++. +++|+|+++|+|.+
T Consensus 53 ~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~-----~g~~~a~n~gi~~----a~~d~i~~lD~D~~ 121 (251)
T cd06439 53 ALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRFPER-----RGKAAALNRALAL----ATGEIVVFTDANAL 121 (251)
T ss_pred hCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEcCCC-----CChHHHHHHHHHH----cCCCEEEEEccccC
Confidence 455654 799999999987433 33322 5777776654 6799999999998 78999999999999
Q ss_pred CCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhh-HHHHHHHHHHHHhhcCC-eeeeccceeEehhhhcC
Q 009753 108 ANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS-YLVVNQVELAGIGSYDA-ALYCGTGCFHRRESLSG 185 (526)
Q Consensus 108 ~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~-~~~f~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~ 185 (526)
+ +|++|++++..+.++ ++++|++.....+.+. ...... ...+...........+. ....|++.++||+++.+
T Consensus 122 ~-~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~ 195 (251)
T cd06439 122 L-DPDALRLLVRHFADP----SVGAVSGELVIVDGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFRP 195 (251)
T ss_pred c-CHHHHHHHHHHhcCC----CccEEEeEEEecCCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhcC
Confidence 9 699999999999755 6888887766544321 011111 11111111111222222 23456666789988853
Q ss_pred CCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCCCCce
Q 009753 186 AKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAF 265 (526)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~ 265 (526)
|+.....||.+++.++..+||++.|+++. ..
T Consensus 196 -----------------------------------------------~~~~~~~eD~~l~~~~~~~G~~~~~~~~~--~~ 226 (251)
T cd06439 196 -----------------------------------------------LPADTINDDFVLPLRIARQGYRVVYEPDA--VA 226 (251)
T ss_pred -----------------------------------------------CCcccchhHHHHHHHHHHcCCeEEecccc--EE
Confidence 44456789999999999999999999874 56
Q ss_pred eeccCCCHHHHHHHHhhhhhhhHH
Q 009753 266 LGVAPVTLDIALVQMKRWSEGMFQ 289 (526)
Q Consensus 266 ~g~aP~~l~~~~~Qr~RWa~G~lq 289 (526)
+...|.+..++++|+.||+.|++|
T Consensus 227 ~~~~~~~~~~~~~~~~r~~~g~~~ 250 (251)
T cd06439 227 YEEVAEDGSEEFRRRVRIAAGNLQ 250 (251)
T ss_pred EEeCcccHHHHHHHHHHHHhcccc
Confidence 899999999999999999999987
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.75 E-value=3.5e-17 Score=160.09 Aligned_cols=197 Identities=16% Similarity=0.106 Sum_probs=138.5
Q ss_pred cCCCC---ceEEEEeCCCChHH---HHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC
Q 009753 34 KQDHQ---SIVQIIVDGRDTNA---VDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY 107 (526)
Q Consensus 34 ~~~~~---~~v~VldD~~~~~~---~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~ 107 (526)
++++| .+|.|+||+++|++ ++....+.|.+.++..++ +++++|+|.|++. +++|+++++|+|..
T Consensus 24 ~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~------~~~~~a~N~g~~~----a~~d~v~~lD~D~~ 93 (249)
T cd02525 24 NQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPK------RIQSAGLNIGIRN----SRGDIIIRVDAHAV 93 (249)
T ss_pred hccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCC------CCchHHHHHHHHH----hCCCEEEEECCCcc
Confidence 45553 57899999998863 333444567788886542 4689999999998 79999999999999
Q ss_pred CCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHH-HHHHH---HhhcC---CeeeeccceeEeh
Q 009753 108 ANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQ-VELAG---IGSYD---AALYCGTGCFHRR 180 (526)
Q Consensus 108 ~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~-~~~~g---~d~~~---~~~~~Gtg~~~RR 180 (526)
+ +|++|.+++.++.++ ++..|+++....+. +.+.......+. ....+ ..... .....|.+.++||
T Consensus 94 ~-~~~~l~~~~~~~~~~----~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (249)
T cd02525 94 Y-PKDYILELVEALKRT----GADNVGGPMETIGE---SKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRR 165 (249)
T ss_pred C-CHHHHHHHHHHHhcC----CCCEEecceecCCC---ChHHHHHHHHhhchhccCCccccccccccccccccccceEEH
Confidence 9 799999999888765 44555554322211 111111110000 00000 00011 2245788889999
Q ss_pred hhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC-CccchHHHHHHHHhCCCeEEEeC
Q 009753 181 ESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG-CAAEDVVTGLTIQCRGWKSMYFK 259 (526)
Q Consensus 181 ~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~-svtED~~t~~rl~~~Gwrs~y~~ 259 (526)
+++... +||+.. ...||.+++++++++|+++.|++
T Consensus 166 ~~~~~~--------------------------------------------g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~ 201 (249)
T cd02525 166 EVFEKV--------------------------------------------GGFDESLVRNEDAELNYRLRKAGYKIWLSP 201 (249)
T ss_pred HHHHHh--------------------------------------------CCCCcccCccchhHHHHHHHHcCcEEEEcC
Confidence 999642 566654 35799999999999999999998
Q ss_pred CCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhh
Q 009753 260 PNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSK 294 (526)
Q Consensus 260 ~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~ 294 (526)
+. ......|.+++.+++|+.||..|..|...++
T Consensus 202 ~~--~~~~~~~~s~~~~~~~~~r~~~~~~~~~~~~ 234 (249)
T cd02525 202 DI--RVYYYPRSTLKKLARQYFRYGKWRARTLRKH 234 (249)
T ss_pred Ce--EEEEcCCCCHHHHHHHHHHHhhhhHHHHHhC
Confidence 74 4567789999999999999999999988753
No 36
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.72 E-value=4.2e-16 Score=165.15 Aligned_cols=200 Identities=15% Similarity=0.079 Sum_probs=133.5
Q ss_pred cccCCCCc--eEEEEeCCCChHHH---HHhccCCC---cEEEEEccCCCCCCCCCcHHHHHHHHHHcccc-CCCcEEEEe
Q 009753 32 VTKQDHQS--IVQIIVDGRDTNAV---DKEGCQLP---TLVYMAREKRPGCPHNFKAGAMNALIRVSSVI-SNGPVILNL 102 (526)
Q Consensus 32 ~~~~~~~~--~v~VldD~~~~~~~---~~~~~~~p---~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~-s~~~~i~il 102 (526)
..+|+||. +|.|+||+|+|++. ++..++.| ++++++.+++|. .-.+|+.|+|.+++.+... .++|+++.+
T Consensus 62 L~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~-g~~Gk~~A~n~g~~~A~~~~~~gd~llfl 140 (384)
T TIGR03469 62 LLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPP-GWSGKLWAVSQGIAAARTLAPPADYLLLT 140 (384)
T ss_pred HHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCC-CCcchHHHHHHHHHHHhccCCCCCEEEEE
Confidence 45678874 79999999998743 33333455 788887554432 2468999999999983110 119999999
Q ss_pred CCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchh----hHHHHHHHH---HHHHhhcC-Ceeeecc
Q 009753 103 DCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN----SYLVVNQVE---LAGIGSYD-AALYCGT 174 (526)
Q Consensus 103 DaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~---~~g~d~~~-~~~~~Gt 174 (526)
|||..+ +|++|++++..+.++ ++++|....++.. . ..+.. ....++... ....+... .....|.
T Consensus 141 DaD~~~-~p~~l~~lv~~~~~~----~~~~vs~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 212 (384)
T TIGR03469 141 DADIAH-GPDNLARLVARARAE----GLDLVSLMVRLRC--E-SFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGG 212 (384)
T ss_pred CCCCCC-ChhHHHHHHHHHHhC----CCCEEEecccccC--C-CHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecce
Confidence 999999 799999999999765 3455544333221 1 11111 011111111 11111111 1235788
Q ss_pred ceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCC--CCccchHHHHHHHHhCC
Q 009753 175 GCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVY--GCAAEDVVTGLTIQCRG 252 (526)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~--~svtED~~t~~rl~~~G 252 (526)
+.++||++++.+ |||+. ..+.||++++.+++++|
T Consensus 213 ~~lirr~~~~~v--------------------------------------------GGf~~~~~~~~ED~~L~~r~~~~G 248 (384)
T TIGR03469 213 CILIRREALERI--------------------------------------------GGIAAIRGALIDDCTLAAAVKRSG 248 (384)
T ss_pred EEEEEHHHHHHc--------------------------------------------CCHHHHhhCcccHHHHHHHHHHcC
Confidence 999999999763 78875 46899999999999999
Q ss_pred CeEEEeCCCCCceeeccCCCHHHHHHHHhhhhh
Q 009753 253 WKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSE 285 (526)
Q Consensus 253 wrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~ 285 (526)
+++.+.... ..+....-+++.+.++|+.||..
T Consensus 249 ~~v~~~~~~-~~~s~r~~~~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 249 GRIWLGLAA-RTRSLRPYDGLGEIWRMIARTAY 280 (384)
T ss_pred CcEEEEecC-ceEEEEecCCHHHHHHHHHHhHH
Confidence 999998764 23334456799999999999943
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.69 E-value=2.8e-16 Score=149.94 Aligned_cols=140 Identities=20% Similarity=0.184 Sum_probs=104.0
Q ss_pred CceEEEEeCCCChHHHHHhc--cCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccc-------cCCCcEEEEeCCCCCC
Q 009753 38 QSIVQIIVDGRDTNAVDKEG--CQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSV-------ISNGPVILNLDCDMYA 108 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~~--~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~-------~s~~~~i~ilDaD~~~ 108 (526)
+.+|.|+||+++|++.+... ...++++++.++..+ .+.+|++|+|.+++.+.. -.++|+|+++|+|..+
T Consensus 25 ~~eIivvdd~S~D~t~~~~~~~~~~~~v~~i~~~~~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~ 102 (191)
T cd06436 25 NFLVLVIDDASDDDTAGIVRLAITDSRVHLLRRHLPN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRL 102 (191)
T ss_pred CeEEEEEECCCCcCHHHHHhheecCCcEEEEeccCCc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCc
Confidence 35799999999988544433 235788888875321 146899999999998420 0135899999999999
Q ss_pred CcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchh----hHHHHHHHHHHHHhhcCCeeeeccceeEehhhhc
Q 009753 109 NDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN----SYLVVNQVELAGIGSYDAALYCGTGCFHRRESLS 184 (526)
Q Consensus 109 ~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~ 184 (526)
+|++|+++..+|.|| +++.||++.+++|.+.+ .+.. +....+..++.++...+...++|+|++|||++|.
T Consensus 103 -~~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~ 176 (191)
T cd06436 103 -DPNALEAVAPYFSDP----RVAGTQSRVRMYNRHKN-LLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALD 176 (191)
T ss_pred -CHhHHHHHHHhhcCC----ceEEEeeeEEEecCCCC-HHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHH
Confidence 799999988888776 79999999988886543 2222 2333345677888777766689999999999997
Q ss_pred C
Q 009753 185 G 185 (526)
Q Consensus 185 ~ 185 (526)
+
T Consensus 177 ~ 177 (191)
T cd06436 177 G 177 (191)
T ss_pred H
Confidence 5
No 38
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.65 E-value=1.6e-15 Score=143.79 Aligned_cols=154 Identities=17% Similarity=0.164 Sum_probs=116.1
Q ss_pred CCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHH
Q 009753 76 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVV 155 (526)
Q Consensus 76 ~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f 155 (526)
.+.|..||..+++. . .++|++++.|+|..+ +|++|++++..+.|| +++.|.++....+.+ .....-...+
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v-~p~~L~~lv~~l~~p----~vglVt~~~~~~~~~--~~~~~l~~~~ 84 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRV-PPDYLRELVAPLADP----GVGLVTGLPRGVPAR--GFWSRLEAAF 84 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeE-CHHHHHHHHHHHhCC----CCcEEEecccccCCc--CHHHHHHHHH
Confidence 57899999999996 2 789999999999999 699999999999987 799998776655432 2211111112
Q ss_pred HHHHHHHHh-hcCCeeeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCC
Q 009753 156 NQVELAGIG-SYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLV 234 (526)
Q Consensus 156 ~~~~~~g~d-~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~ 234 (526)
+.....-.. .-+..++.|..+++||++|+.. |||.
T Consensus 85 ~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~~--------------------------------------------GG~~ 120 (175)
T PF13506_consen 85 FNFLPGVLQALGGAPFAWGGSMAFRREALEEI--------------------------------------------GGFE 120 (175)
T ss_pred HhHHHHHHHHhcCCCceecceeeeEHHHHHHc--------------------------------------------ccHH
Confidence 111111111 2245678999999999999753 6765
Q ss_pred C--CCccchHHHHHHHHhCCCeEEEeCCCCCceeeccC----CCHHHHHHHHhhhhh
Q 009753 235 Y--GCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAP----VTLDIALVQMKRWSE 285 (526)
Q Consensus 235 ~--~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP----~~l~~~~~Qr~RWa~ 285 (526)
. +.++||+.+|-+++.+|||++..+.+ +.....| .+++++++++.||++
T Consensus 121 ~l~~~ladD~~l~~~~~~~G~~v~~~~~~--v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 121 ALADYLADDYALGRRLRARGYRVVLSPYP--VVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred HHhhhhhHHHHHHHHHHHCCCeEEEcchh--eeecccCccccccHHHHHHHHHhhcC
Confidence 5 58999999999999999999988753 3345566 489999999999985
No 39
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.59 E-value=5.7e-15 Score=139.50 Aligned_cols=140 Identities=16% Similarity=0.143 Sum_probs=94.1
Q ss_pred cCCCC---ceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHcc-ccCCCcEEEEeCCCCCCC
Q 009753 34 KQDHQ---SIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSS-VISNGPVILNLDCDMYAN 109 (526)
Q Consensus 34 ~~~~~---~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~-~~s~~~~i~ilDaD~~~~ 109 (526)
++++| .+|.|+||+++|++.+.... +. ..++.|.+. +..+|++|+|.+++.+. ..+++|+++++|+|+.+
T Consensus 21 ~~~~p~~~~eiivvdd~s~D~t~~~~~~-~~-~~~~~~~~~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~- 94 (183)
T cd06438 21 AQDYPRELYRIFVVADNCTDDTAQVARA-AG-ATVLERHDP---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLV- 94 (183)
T ss_pred hcCCCCcccEEEEEeCCCCchHHHHHHH-cC-CeEEEeCCC---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCC-
Confidence 45554 46899999999885543321 11 223334332 24689999999999741 12469999999999999
Q ss_pred cHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchh----hHHHHHHHHHHHHhhcCCe-eeeccceeEehhhhc
Q 009753 110 DGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN----SYLVVNQVELAGIGSYDAA-LYCGTGCFHRRESLS 184 (526)
Q Consensus 110 ~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~ 184 (526)
+|++|++++..|.+. ...||+.....+...+ .+.. ....++.....++..+++. .+.|+|+++||+++.
T Consensus 95 ~p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~ 168 (183)
T cd06438 95 DPNALEELNARFAAG-----ARVVQAYYNSKNPDDS-WITRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLR 168 (183)
T ss_pred ChhHHHHHHHHHhhC-----CCeeEEEEeeeCCccC-HHHHHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHH
Confidence 699999999998642 2467877666554332 2221 2223334455577777765 469999999999997
Q ss_pred C
Q 009753 185 G 185 (526)
Q Consensus 185 ~ 185 (526)
.
T Consensus 169 ~ 169 (183)
T cd06438 169 Q 169 (183)
T ss_pred h
Confidence 3
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.52 E-value=1.2e-13 Score=131.30 Aligned_cols=164 Identities=17% Similarity=0.092 Sum_probs=116.2
Q ss_pred cCCCC-ceEEEEeCCC-ChHH---HHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCC
Q 009753 34 KQDHQ-SIVQIIVDGR-DTNA---VDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYA 108 (526)
Q Consensus 34 ~~~~~-~~v~VldD~~-~~~~---~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~ 108 (526)
.|+++ .+|.|+||++ +|++ +++...+.| +.++.+++| .|+++|+|.|++. ++||+|+++|+|.++
T Consensus 24 ~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n-----~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~ 93 (201)
T cd04195 24 KQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKN-----RGLGKALNEGLKH----CTYDWVARMDTDDIS 93 (201)
T ss_pred hcCCCCcEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCcc-----ccHHHHHHHHHHh----cCCCEEEEeCCcccc
Confidence 44554 6788899988 4443 333333455 888888775 6899999999998 899999999999999
Q ss_pred CcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccc----hhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhc
Q 009753 109 NDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLY----ANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLS 184 (526)
Q Consensus 109 ~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~----~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~ 184 (526)
.|++|++++..|.+ ++++++|.+.....+.+..... .......+... .....++|.+.++||+++.
T Consensus 94 -~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~rr~~~~ 163 (201)
T cd04195 94 -LPDRFEKQLDFIEK---NPEIDIVGGGVLEFDSDGNDIGKRRLPTSHDDILKFA------RRRSPFNHPTVMFRKSKVL 163 (201)
T ss_pred -CcHHHHHHHHHHHh---CCCeEEEcccEEEECCCCCeeccccCCCCHHHHHHHh------ccCCCCCChHHhhhHHHHH
Confidence 79999999999862 3368888877655433221111 00111111111 1122345667899999997
Q ss_pred CCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCC
Q 009753 185 GAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
.. +||......||.++..++..+|+++.|++++
T Consensus 164 ~~--------------------------------------------g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~~ 196 (201)
T cd04195 164 AV--------------------------------------------GGYQDLPLVEDYALWARMLANGARFANLPEI 196 (201)
T ss_pred Hc--------------------------------------------CCcCCCCCchHHHHHHHHHHcCCceecccHH
Confidence 53 7888778999999999999999999999764
No 41
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.48 E-value=3.8e-13 Score=127.85 Aligned_cols=161 Identities=17% Similarity=0.094 Sum_probs=112.3
Q ss_pred cCCCC-ceEEEEeCCCChHHH----HHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCC
Q 009753 34 KQDHQ-SIVQIIVDGRDTNAV----DKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYA 108 (526)
Q Consensus 34 ~~~~~-~~v~VldD~~~~~~~----~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~ 108 (526)
+++++ .+|.|+||+++|+.. +......+++.++..+.+ .+++.|+|.+++. +++||++++|+|.++
T Consensus 26 ~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~a~n~g~~~----a~~d~i~~ld~D~~~ 96 (202)
T cd04184 26 AQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREEN-----GGISAATNSALEL----ATGEFVALLDHDDEL 96 (202)
T ss_pred hCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccC-----CCHHHHHHHHHHh----hcCCEEEEECCCCcC
Confidence 45555 479999999987522 222334567777776654 6899999999998 889999999999999
Q ss_pred CcHHHHHHHHHHh-hcccCCCcEEEEecCcccccCCcc--ccc-hhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhc
Q 009753 109 NDGDAIREALCFL-LDEKREHEIAFVQHPQRFDNICKN--DLY-ANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLS 184 (526)
Q Consensus 109 ~~p~~L~~~v~~f-~d~~~~~~va~VQ~pq~f~n~~~~--d~~-~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~ 184 (526)
+|++|.+++..+ .++ ++++|.+.......+.. .+. ..... .+ ......+.|.++++||+++.
T Consensus 97 -~~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~r~~~~ 162 (202)
T cd04184 97 -APHALYEVVKALNEHP----DADLIYSDEDKIDEGGKRSEPFFKPDWS--PD-------LLLSQNYIGHLLVYRRSLVR 162 (202)
T ss_pred -ChHHHHHHHHHHHhCC----CCCEEEccHHhccCCCCEeccccCCCCC--HH-------HhhhcCCccceEeEEHHHHH
Confidence 799999999988 444 56777665544321111 000 00000 00 01111345677789999997
Q ss_pred CCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC-CccchHHHHHHHHhCCCeEEEeCCC
Q 009753 185 GAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG-CAAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~-svtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
.. |||+.+ ...||.++++|++.+||+.+|+++.
T Consensus 163 ~i--------------------------------------------ggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~~ 196 (202)
T cd04184 163 QV--------------------------------------------GGFREGFEGAQDYDLVLRVSEHTDRIAHIPRV 196 (202)
T ss_pred Hh--------------------------------------------CCCCcCcccchhHHHHHHHHhccceEEEccHh
Confidence 53 678765 3579999999999999999999874
No 42
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.42 E-value=3e-12 Score=130.73 Aligned_cols=163 Identities=15% Similarity=0.056 Sum_probs=110.2
Q ss_pred ceEEEEeCCCChHHHHHh-----ccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHH
Q 009753 39 SIVQIIVDGRDTNAVDKE-----GCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDA 113 (526)
Q Consensus 39 ~~v~VldD~~~~~~~~~~-----~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~ 113 (526)
.+|.|+||+|+|.+.+.. ....|+++++..++| .+++.|.|.|++. ++||+|+.+|+|+.+ +|++
T Consensus 31 ~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~fLD~D~~~-~~~w 100 (299)
T cd02510 31 KEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKR-----EGLIRARIAGARA----ATGDVLVFLDSHCEV-NVGW 100 (299)
T ss_pred CEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCC-----CCHHHHHHHHHHH----ccCCEEEEEeCCccc-CccH
Confidence 489999999998754432 234678999988765 6899999999999 899999999999999 7999
Q ss_pred HHHHHHHhhcccCCCcEEEEecCcccccCCc-cccchh---------hHHHHHH-------HHHHHH--hhcCCeeeecc
Q 009753 114 IREALCFLLDEKREHEIAFVQHPQRFDNICK-NDLYAN---------SYLVVNQ-------VELAGI--GSYDAALYCGT 174 (526)
Q Consensus 114 L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~-~d~~~~---------~~~~f~~-------~~~~g~--d~~~~~~~~Gt 174 (526)
|.+++..+.++. . +.|- |.... .+. ...+.. .....+. ...... .....+..+|.
T Consensus 101 L~~ll~~l~~~~---~-~~v~-p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 174 (299)
T cd02510 101 LEPLLARIAENR---K-TVVC-PIIDV-IDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRESPTAPIRSPTMAGG 174 (299)
T ss_pred HHHHHHHHHhCC---C-eEEE-eeecc-ccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcCCCCCccCccccce
Confidence 999999886431 2 2222 32110 000 000000 0000000 000010 11233456788
Q ss_pred ceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCc---cchHHHHHHHHhC
Q 009753 175 GCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCA---AEDVVTGLTIQCR 251 (526)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~sv---tED~~t~~rl~~~ 251 (526)
+.++||+++..+ |||+++-. .||+++++|+...
T Consensus 175 ~~~irr~~~~~v--------------------------------------------GgfDe~~~~~~~ED~Dl~~R~~~~ 210 (299)
T cd02510 175 LFAIDREWFLEL--------------------------------------------GGYDEGMDIWGGENLELSFKVWQC 210 (299)
T ss_pred eeEEEHHHHHHh--------------------------------------------CCCCCcccccCchhHHHHHHHHHc
Confidence 889999999763 78887643 4999999999999
Q ss_pred CCeEEEeCCC
Q 009753 252 GWKSMYFKPN 261 (526)
Q Consensus 252 Gwrs~y~~~~ 261 (526)
||+++|+++.
T Consensus 211 G~~i~~~p~a 220 (299)
T cd02510 211 GGSIEIVPCS 220 (299)
T ss_pred CCeEEEeecc
Confidence 9999999874
No 43
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.41 E-value=2e-12 Score=121.56 Aligned_cols=165 Identities=17% Similarity=0.047 Sum_probs=110.8
Q ss_pred cCCCC-ceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHH
Q 009753 34 KQDHQ-SIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGD 112 (526)
Q Consensus 34 ~~~~~-~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~ 112 (526)
+|+++ .+|.|+||+++|++.+....-...+.++..+++ .++++|+|.|++. +++|+|+++|+|..+ .|+
T Consensus 22 ~q~~~~~evivvDd~s~d~~~~~~~~~~~~~~~~~~~~~-----~g~~~a~n~~~~~----a~~~~v~~ld~D~~~-~~~ 91 (202)
T cd06433 22 SQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPD-----KGIYDAMNKGIAL----ATGDIIGFLNSDDTL-LPG 91 (202)
T ss_pred hCCCCCceEEEEeCCCCccHHHHHHHhHhhcEEEEecCC-----cCHHHHHHHHHHH----cCCCEEEEeCCCccc-Cch
Confidence 44554 579999999988744333211112445555543 6899999999998 889999999999999 699
Q ss_pred HHHHHHHHh-hcccCCCcEEEEecCcccccCCccccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCcc
Q 009753 113 AIREALCFL-LDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKD 191 (526)
Q Consensus 113 ~L~~~v~~f-~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 191 (526)
.+.+.+..+ .++ +..+|.+...+.+.+........ ...............+|+++++||+++...
T Consensus 92 ~~~~~~~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 157 (202)
T cd06433 92 ALLAVVAAFAEHP----EVDVVYGDVLLVDENGRVIGRRR-----PPPFLDKFLLYGMPICHQATFFRRSLFEKY----- 157 (202)
T ss_pred HHHHHHHHHHhCC----CccEEEeeeEEEcCCCCcccCCC-----CcchhhhHHhhcCcccCcceEEEHHHHHHh-----
Confidence 999998554 343 56777766554433222111000 000111112233456788899999999753
Q ss_pred ccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC-CccchHHHHHHHHhCCCeEEEeCCC
Q 009753 192 YRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG-CAAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~-svtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
+||+.. ...||.+..+++..+|++.+++++.
T Consensus 158 ---------------------------------------~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~~ 189 (202)
T cd06433 158 ---------------------------------------GGFDESYRIAADYDLLLRLLLAGKIFKYLPEV 189 (202)
T ss_pred ---------------------------------------CCCchhhCchhhHHHHHHHHHcCCceEecchh
Confidence 557654 5689999999999999999988764
No 44
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.40 E-value=3.2e-12 Score=116.51 Aligned_cols=133 Identities=19% Similarity=0.182 Sum_probs=106.4
Q ss_pred CceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHH
Q 009753 38 QSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREA 117 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~ 117 (526)
+..|.|+||+++++..+......+++.++..+++ .++++|+|.+++. +++++++++|+|.++ .|+++.++
T Consensus 26 ~~~iiivdd~s~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~a~n~~~~~----~~~~~i~~~D~D~~~-~~~~l~~~ 95 (166)
T cd04186 26 DFEVIVVDNASTDGSVELLRELFPEVRLIRNGEN-----LGFGAGNNQGIRE----AKGDYVLLLNPDTVV-EPGALLEL 95 (166)
T ss_pred CeEEEEEECCCCchHHHHHHHhCCCeEEEecCCC-----cChHHHhhHHHhh----CCCCEEEEECCCcEE-CccHHHHH
Confidence 5679999999998755544333446777776654 6899999999998 789999999999999 69999999
Q ss_pred HHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCcccccccc
Q 009753 118 LCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINE 197 (526)
Q Consensus 118 v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~ 197 (526)
+..+.+ .++++++.+. ++|++.++||+++...
T Consensus 96 ~~~~~~---~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~----------- 127 (166)
T cd04186 96 LDAAEQ---DPDVGIVGPK----------------------------------VSGAFLLVRREVFEEV----------- 127 (166)
T ss_pred HHHHHh---CCCceEEEcc----------------------------------CceeeEeeeHHHHHHc-----------
Confidence 987653 2367777644 7888999999999753
Q ss_pred ccCCCCcChHHHHHhhchhccccccccCccccccCCCCCC--ccchHHHHHHHHhCCCeEEEeCCC
Q 009753 198 AKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGC--AAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 198 ~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~s--vtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
+||+... ..||.+.++++..+||++.++++.
T Consensus 128 ---------------------------------~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~ 160 (166)
T cd04186 128 ---------------------------------GGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQA 160 (166)
T ss_pred ---------------------------------CCCChhhhccccHHHHHHHHHHcCCeEEEccce
Confidence 5676643 569999999999999999998863
No 45
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.39 E-value=1.9e-12 Score=126.28 Aligned_cols=169 Identities=14% Similarity=0.084 Sum_probs=107.5
Q ss_pred CceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHH
Q 009753 38 QSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREA 117 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~ 117 (526)
..+|.|+||+++++.........+.+.++..++| .|+++|+|.|++.+.. .++|+++.+|+|..+ +|++|.++
T Consensus 24 ~~~iivvDn~s~~~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~-~~~~l~~l 96 (237)
T cd02526 24 VDKVVVVDNSSGNDIELRLRLNSEKIELIHLGEN-----LGIAKALNIGIKAALE-NGADYVLLFDQDSVP-PPDMVEKL 96 (237)
T ss_pred CCEEEEEeCCCCccHHHHhhccCCcEEEEECCCc-----eehHHhhhHHHHHHHh-CCCCEEEEECCCCCc-CHhHHHHH
Confidence 4578899999887643322213467888888775 5699999999998310 145999999999999 79999998
Q ss_pred H---HHhhcccCCCcEEEEecCcccccCCccccchhhHHH-HHHHHHHHHhhc-CCeeeeccceeEehhhhcCCCCCccc
Q 009753 118 L---CFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLV-VNQVELAGIGSY-DAALYCGTGCFHRRESLSGAKYPKDY 192 (526)
Q Consensus 118 v---~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~-f~~~~~~g~d~~-~~~~~~Gtg~~~RR~aL~~~~~~~~~ 192 (526)
+ ..+. .+++++.++ |+................. ............ ......|+|+++||+++..+
T Consensus 97 ~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~------ 166 (237)
T cd02526 97 LAYKILSD---KNSNIGAVG-PRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEKV------ 166 (237)
T ss_pred HHHHHhhc---cCCCeEEEe-eeEEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHHh------
Confidence 5 2222 233566554 4433221111111000000 000000011111 22345788999999999753
Q ss_pred cccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCc--cchHHHHHHHHhCCCeEEEeCCC
Q 009753 193 RNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCA--AEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~sv--tED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
|||+.... .||++.++|+..+||+..|++..
T Consensus 167 --------------------------------------ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~ 199 (237)
T cd02526 167 --------------------------------------GGFDEDLFIDYVDTEWCLRARSKGYKIYVVPDA 199 (237)
T ss_pred --------------------------------------CCCCHHHcCccchHHHHHHHHHcCCcEEEEcCe
Confidence 77876543 58999999999999999999874
No 46
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.37 E-value=1.5e-11 Score=118.83 Aligned_cols=166 Identities=13% Similarity=0.021 Sum_probs=109.4
Q ss_pred CCceEEEEeCCCChHHH---HHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHH
Q 009753 37 HQSIVQIIVDGRDTNAV---DKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDA 113 (526)
Q Consensus 37 ~~~~v~VldD~~~~~~~---~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~ 113 (526)
++.+|.|+||+++|++. +......|.+.++..+++ .+|++|+|.|++. +.+|+|+++|+|..+ +|++
T Consensus 26 ~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~ 95 (224)
T cd06442 26 IDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGK-----RGLGSAYIEGFKA----ARGDVIVVMDADLSH-PPEY 95 (224)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCC-----CChHHHHHHHHHH----cCCCEEEEEECCCCC-CHHH
Confidence 46789999999988743 333445677888887765 7899999999998 889999999999999 7999
Q ss_pred HHHHHHHhhcccCCCcEEEEecCcccccCC-ccccchhh-HHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCcc
Q 009753 114 IREALCFLLDEKREHEIAFVQHPQRFDNIC-KNDLYANS-YLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKD 191 (526)
Q Consensus 114 L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~-~~d~~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~ 191 (526)
|.+++..+.++ +.+.|.++....... .+...... .........+.....+.....|++.++||+++..+
T Consensus 96 l~~l~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i----- 166 (224)
T cd06442 96 IPELLEAQLEG----GADLVIGSRYVEGGGVEGWGLKRKLISRGANLLARLLLGRKVSDPTSGFRAYRREVLEKL----- 166 (224)
T ss_pred HHHHHHHHhcC----CCCEEEEeeeecCCccCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCCccchhhHHHHHHH-----
Confidence 99999987654 334455443222111 11111100 00011111111112233345677778999999753
Q ss_pred ccccccccCCCCcChHHHHHhhchhccccccccCcccccc-CCCCCCccchHHHHHHHHhCCCeEEEeCC
Q 009753 192 YRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM-GLVYGCAAEDVVTGLTIQCRGWKSMYFKP 260 (526)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~g-G~~~~svtED~~t~~rl~~~Gwrs~y~~~ 260 (526)
+ ++......+|+++.+++...||++.+.+.
T Consensus 167 ---------------------------------------g~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~ 197 (224)
T cd06442 167 ---------------------------------------IDSLVSKGYKFQLELLVRARRLGYRIVEVPI 197 (224)
T ss_pred ---------------------------------------hhhccCCCcEEeHHHHHHHHHcCCeEEEeCe
Confidence 1 23333456788899999999999999875
No 47
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.36 E-value=1.7e-11 Score=118.14 Aligned_cols=151 Identities=19% Similarity=0.106 Sum_probs=101.4
Q ss_pred CceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHH
Q 009753 38 QSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREA 117 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~ 117 (526)
+.+|.|+||+++|+..+.... +++.++..+ .+|++|+|.|++. +++|+|+++|+|.++ +|++++++
T Consensus 28 ~~evivvdd~s~d~~~~~~~~--~~~~~~~~~-------~g~~~a~n~g~~~----a~~~~i~~~D~D~~~-~~~~l~~l 93 (221)
T cd02522 28 PLEIIVVDGGSTDGTVAIARS--AGVVVISSP-------KGRARQMNAGAAA----ARGDWLLFLHADTRL-PPDWDAAI 93 (221)
T ss_pred CcEEEEEeCCCCccHHHHHhc--CCeEEEeCC-------cCHHHHHHHHHHh----ccCCEEEEEcCCCCC-ChhHHHHH
Confidence 467999999999876554432 556665432 3689999999998 789999999999999 79999998
Q ss_pred HHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCcccccccc
Q 009753 118 LCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINE 197 (526)
Q Consensus 118 v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~ 197 (526)
+..+.++ ....+.....+.+. + ..... .......+....+..+.+.|.++||+++..+
T Consensus 94 ~~~~~~~----~~~~~~~~~~~~~~--~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----------- 151 (221)
T cd02522 94 IETLRAD----GAVAGAFRLRFDDP--G-PRLRL----LELGANLRSRLFGLPYGDQGLFIRRELFEEL----------- 151 (221)
T ss_pred HHHhhcC----CcEEEEEEeeecCC--c-cchhh----hhhcccceecccCCCcCCceEEEEHHHHHHh-----------
Confidence 7666543 23333322222221 1 11110 0001111111122234566788999988753
Q ss_pred ccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEE
Q 009753 198 AKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMY 257 (526)
Q Consensus 198 ~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y 257 (526)
|||++....||+++++|+..+|++..+
T Consensus 152 ---------------------------------G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 152 ---------------------------------GGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred ---------------------------------CCCCccccccHHHHHHHHHhCCCEEEc
Confidence 789888899999999999999999876
No 48
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.30 E-value=4.7e-11 Score=118.16 Aligned_cols=165 Identities=9% Similarity=-0.023 Sum_probs=106.9
Q ss_pred CceEEEEeCCCChHHHHH---hccCC--CcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHH
Q 009753 38 QSIVQIIVDGRDTNAVDK---EGCQL--PTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGD 112 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~---~~~~~--p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~ 112 (526)
+.+|.|+||+|+|++.+. ...+. +++.++.+++| .+|++|+|.|++. +++|+++++|+|..+ +|+
T Consensus 40 ~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n-----~G~~~a~n~g~~~----a~g~~i~~lD~D~~~-~~~ 109 (243)
T PLN02726 40 DFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGK-----LGLGTAYIHGLKH----ASGDFVVIMDADLSH-HPK 109 (243)
T ss_pred CeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCC-----CCHHHHHHHHHHH----cCCCEEEEEcCCCCC-CHH
Confidence 568999999999875433 22233 36777766654 5799999999998 889999999999999 799
Q ss_pred HHHHHHHHhhcccCCCcEEEEecCcccccCC-ccccch-hhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCc
Q 009753 113 AIREALCFLLDEKREHEIAFVQHPQRFDNIC-KNDLYA-NSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPK 190 (526)
Q Consensus 113 ~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~-~~d~~~-~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~ 190 (526)
+|.+++..+.++ +..+|.+.....+.. ....+. ......+.....-..+.+..-.+|...++||+++..+
T Consensus 110 ~l~~l~~~~~~~----~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~~i---- 181 (243)
T PLN02726 110 YLPSFIKKQRET----GADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALEDL---- 181 (243)
T ss_pred HHHHHHHHHHhc----CCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHHHH----
Confidence 999999988654 456665543222111 010111 1111112222222222233335666778999999753
Q ss_pred cccccccccCCCCcChHHHHHhhchhccccccccCccccccC-CCCCCccchHHHHHHHHhCCCeEEEeCC
Q 009753 191 DYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMG-LVYGCAAEDVVTGLTIQCRGWKSMYFKP 260 (526)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG-~~~~svtED~~t~~rl~~~Gwrs~y~~~ 260 (526)
++ ...+...+|+++.+++..+|||++++|.
T Consensus 182 ----------------------------------------~~~~~~~~~~~~~el~~~~~~~g~~i~~vp~ 212 (243)
T PLN02726 182 ----------------------------------------VSSVVSKGYVFQMEIIVRASRKGYRIEEVPI 212 (243)
T ss_pred ----------------------------------------HhhccCCCcEEehHHHHHHHHcCCcEEEeCc
Confidence 11 1112345689999999999999999875
No 49
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.29 E-value=4.8e-11 Score=111.49 Aligned_cols=142 Identities=18% Similarity=0.111 Sum_probs=99.2
Q ss_pred CceEEEEeCCCChHHHH---HhccCCC-cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHH
Q 009753 38 QSIVQIIVDGRDTNAVD---KEGCQLP-TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDA 113 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~---~~~~~~p-~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~ 113 (526)
+.+|.|+||++++.+.+ ......+ .++++.+++. ..+|++|+|.+++. +++|+|+++|+|.++ +|++
T Consensus 26 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~-~~~~ 96 (182)
T cd06420 26 PFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDE----GFRKAKIRNKAIAA----AKGDYLIFIDGDCIP-HPDF 96 (182)
T ss_pred CCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCc----chhHHHHHHHHHHH----hcCCEEEEEcCCccc-CHHH
Confidence 45799999999987432 2222122 2455555432 24799999999998 899999999999999 7999
Q ss_pred HHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCcccc
Q 009753 114 IREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYR 193 (526)
Q Consensus 114 L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~ 193 (526)
|++++..+ ++ .++ |.+++...+.+... ..+.|+++.++|+.+..
T Consensus 97 l~~~~~~~-~~----~~~-v~g~~~~~~~~~~~----------------------~~~~~~~~~~~r~~~~~-------- 140 (182)
T cd06420 97 IADHIELA-EP----GVF-LSGSRVLLNEKLTE----------------------RGIRGCNMSFWKKDLLA-------- 140 (182)
T ss_pred HHHHHHHh-CC----CcE-Eecceeecccccce----------------------eEeccceEEEEHHHHHH--------
Confidence 99999887 43 334 44444333221110 34567788888888864
Q ss_pred ccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCC---ccchHHHHHHHHhCCCeEEEeCC
Q 009753 194 NINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGC---AAEDVVTGLTIQCRGWKSMYFKP 260 (526)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~s---vtED~~t~~rl~~~Gwrs~y~~~ 260 (526)
.|||+... -.||+++++|+..+|++..++.+
T Consensus 141 ------------------------------------~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~ 174 (182)
T cd06420 141 ------------------------------------VNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKF 174 (182)
T ss_pred ------------------------------------hCCCCcccccCCcchHHHHHHHHHcCCcEEEecc
Confidence 26777643 27999999999999977766653
No 50
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.27 E-value=3.5e-11 Score=121.52 Aligned_cols=168 Identities=14% Similarity=0.068 Sum_probs=110.7
Q ss_pred ceEEEEeCCCChH-HHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHH
Q 009753 39 SIVQIIVDGRDTN-AVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREA 117 (526)
Q Consensus 39 ~~v~VldD~~~~~-~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~ 117 (526)
..|.|+||+|+++ ..++.-...|++.|+..++| .|.|+|+|.|++.+- ..++|+|+.+|.|.++ +|++|.++
T Consensus 22 ~~iiVVDN~S~~~~~~~~~~~~~~~i~~i~~~~N-----~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~-~~~~l~~l 94 (281)
T TIGR01556 22 DRIIAVDNSPHSDQPLKNARLRGQKIALIHLGDN-----QGIAGAQNQGLDASF-RRGVQGVLLLDQDSRP-GNAFLAAQ 94 (281)
T ss_pred CEEEEEECcCCCcHhHHHHhccCCCeEEEECCCC-----cchHHHHHHHHHHHH-HCCCCEEEEECCCCCC-CHHHHHHH
Confidence 4699999998643 33333335688999998776 689999999999831 1268999999999999 79999999
Q ss_pred HHHhhcccCCCcEEEEecCcccccCCccccchh--hHHHHHHHH-HHHHhh-cCCeeeeccceeEehhhhcCCCCCcccc
Q 009753 118 LCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN--SYLVVNQVE-LAGIGS-YDAALYCGTGCFHRRESLSGAKYPKDYR 193 (526)
Q Consensus 118 v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--~~~~f~~~~-~~g~d~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~~ 193 (526)
+..+..+ +.+++.|. |..+ +.+.+..++. ......... ...... ....+..++|+++||+++..+
T Consensus 95 ~~~~~~~--~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~i------- 163 (281)
T TIGR01556 95 WKLLSAE--NGQACALG-PRFF-DRGTSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQRL------- 163 (281)
T ss_pred HHHHHhc--CCceEEEC-CeEE-cCCCcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHHHh-------
Confidence 9888642 22677775 4333 2222111111 000000000 000011 122345788999999999753
Q ss_pred ccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCC--ccchHHHHHHHHhCCCeEEEeCCC
Q 009753 194 NINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGC--AAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~s--vtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
|||+++- =.||.+..+|+.++||++.++++.
T Consensus 164 -------------------------------------G~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~ 196 (281)
T TIGR01556 164 -------------------------------------GMMDEELFIDHVDTEWSLRAQNYGIPLYIDPDI 196 (281)
T ss_pred -------------------------------------CCccHhhcccchHHHHHHHHHHCCCEEEEeCCE
Confidence 5565542 248999999999999999999874
No 51
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.26 E-value=9.9e-11 Score=111.63 Aligned_cols=142 Identities=17% Similarity=0.108 Sum_probs=103.2
Q ss_pred cCCC-CceEEEEeCCCChHHHH---HhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCC
Q 009753 34 KQDH-QSIVQIIVDGRDTNAVD---KEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYAN 109 (526)
Q Consensus 34 ~~~~-~~~v~VldD~~~~~~~~---~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~ 109 (526)
+|++ +.+|.|+||+++|++.+ ..+...+ +.++..+++ .+++.++|.+++..- ..++|+++++|+|.++
T Consensus 21 ~q~~~~~eiiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n-----~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~- 92 (202)
T cd04185 21 AQTRPPDHIIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPEN-----LGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIP- 92 (202)
T ss_pred hccCCCceEEEEECCCCcchHHHHHHhcCCCc-eEEEECccc-----cchhhHHHHHHHHHh-ccCCCEEEEeCCCCCc-
Confidence 3444 35799999999987443 3333344 677777765 578889999988642 3579999999999999
Q ss_pred cHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCC
Q 009753 110 DGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYP 189 (526)
Q Consensus 110 ~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~ 189 (526)
+|+++++++..+.++ +++.+. |..+.. +. +++|.++||+++...
T Consensus 93 ~~~~l~~l~~~~~~~----~~~~~~-~~~~~~-~~---------------------------~~~~~~~~~~~~~~~--- 136 (202)
T cd04185 93 DPDALEKLLAYADKD----NPQFLA-PLVLDP-DG---------------------------SFVGVLISRRVVEKI--- 136 (202)
T ss_pred ChHHHHHHHHHHhcC----CceEec-ceeEcC-CC---------------------------ceEEEEEeHHHHHHh---
Confidence 799999999998755 566664 333221 10 456789999999753
Q ss_pred ccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC--CccchHHHHHHHHhCCCeEEEeCCC
Q 009753 190 KDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG--CAAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~--svtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
||+... ...||.+.+.++..+|++. |+++.
T Consensus 137 -----------------------------------------g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~ 168 (202)
T cd04185 137 -----------------------------------------GLPDKEFFIWGDDTEYTLRASKAGPGI-YVPDA 168 (202)
T ss_pred -----------------------------------------CCCChhhhccchHHHHHHHHHHcCCcE-Eecce
Confidence 344322 3469999999999999999 99874
No 52
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.25 E-value=5.7e-11 Score=113.39 Aligned_cols=169 Identities=15% Similarity=0.094 Sum_probs=111.4
Q ss_pred cCCCC-ceEEEEeCCCChHH---HHHhccCCC-cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCC
Q 009753 34 KQDHQ-SIVQIIVDGRDTNA---VDKEGCQLP-TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYA 108 (526)
Q Consensus 34 ~~~~~-~~v~VldD~~~~~~---~~~~~~~~p-~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~ 108 (526)
+|++| .+|.|+|||++|++ ++....+.| .+.++..+++ +++++|+|.+++. +++|+|+++|+|.+.
T Consensus 22 ~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~-----~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~ 92 (214)
T cd04196 22 AQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKN-----LGVARNFESLLQA----ADGDYVFFCDQDDIW 92 (214)
T ss_pred hCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCC-----ccHHHHHHHHHHh----CCCCEEEEECCCccc
Confidence 44443 57999999998873 334444554 3455555543 7899999999998 899999999999999
Q ss_pred CcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHH--HHHHHhhcCCeeeeccceeEehhhhcCC
Q 009753 109 NDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQV--ELAGIGSYDAALYCGTGCFHRRESLSGA 186 (526)
Q Consensus 109 ~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~--~~~g~d~~~~~~~~Gtg~~~RR~aL~~~ 186 (526)
.|+.|.+++..+.. +++.+++.+.....+.+... ........... ............+.|+++++||+++...
T Consensus 93 -~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 167 (214)
T cd04196 93 -LPDKLERLLKAFLK---DDKPLLVYSDLELVDENGNP-IGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLELA 167 (214)
T ss_pred -ChhHHHHHHHHHhc---CCCceEEecCcEEECCCCCC-cccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHhh
Confidence 79999999998542 22667777766544332211 00000000000 0001111123356789999999999753
Q ss_pred CCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC-CccchHHHHHHHHhCCCeEEEeCCC
Q 009753 187 KYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG-CAAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~-svtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
++++.. ...||.++..++.. |++..|++++
T Consensus 168 --------------------------------------------~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~ 198 (214)
T cd04196 168 --------------------------------------------LPFPDADVIMHDWWLALLASA-FGKVVFLDEP 198 (214)
T ss_pred --------------------------------------------ccccccccccchHHHHHHHHH-cCceEEcchh
Confidence 566665 67899999988877 7788888874
No 53
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.22 E-value=3.3e-10 Score=109.81 Aligned_cols=175 Identities=15% Similarity=0.046 Sum_probs=107.3
Q ss_pred cCCCC--ceEEEEeCCCChHHH---HHhcc--CCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC
Q 009753 34 KQDHQ--SIVQIIVDGRDTNAV---DKEGC--QLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM 106 (526)
Q Consensus 34 ~~~~~--~~v~VldD~~~~~~~---~~~~~--~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~ 106 (526)
.|++| .+|.|+||+|+|.+. ++... ..++++++..+.+.+ ...+.+.|+|.|++. ++||+++.+|+|.
T Consensus 21 ~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~ 95 (219)
T cd06913 21 QQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDD 95 (219)
T ss_pred hCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCC-CCccHHHHHHHHHHh----cCCCEEEEECCCc
Confidence 45554 489999999988643 22222 244677776654311 246899999999998 8999999999999
Q ss_pred CCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhH-HHHHHHHHHHHhhcCCeeeeccceeEehhhhcC
Q 009753 107 YANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSY-LVVNQVELAGIGSYDAALYCGTGCFHRRESLSG 185 (526)
Q Consensus 107 ~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~-~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (526)
.+ +|+.+.+.+..+.+.. . ++|-++......+....+.... ...............++.....+.++||+++..
T Consensus 96 ~~-~~~~l~~~~~~~~~~~---~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 170 (219)
T cd06913 96 VM-MPQRIRLQYEAALQHP---N-SIIGCQVRRIPEDSTERYTRWINTLTREQLLTQVYTSHGPTVIMPTWFCSREWFSH 170 (219)
T ss_pred cC-ChhHHHHHHHHHHhCC---C-cEEEEEEEecCcccchhhHHHHHhcCHHHHHHHHHhhcCCccccccceeehhHHhh
Confidence 99 6999999887775421 1 2332211111111111111100 000000111111123333334456899999975
Q ss_pred CCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC--CccchHHHHHHHHhCCCeEEEeCCCC
Q 009753 186 AKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG--CAAEDVVTGLTIQCRGWKSMYFKPNK 262 (526)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~--svtED~~t~~rl~~~Gwrs~y~~~~~ 262 (526)
. |||+.. ...||+++.+|+.++|++..|++++.
T Consensus 171 ~--------------------------------------------g~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~ 205 (219)
T cd06913 171 V--------------------------------------------GPFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRCL 205 (219)
T ss_pred c--------------------------------------------CCccchhccchhHHHHHHHHHHcCCceEEEccee
Confidence 3 777654 35699999999999999999998853
No 54
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.17 E-value=5.3e-10 Score=107.71 Aligned_cols=165 Identities=14% Similarity=0.006 Sum_probs=102.3
Q ss_pred CCceEEEEeCCCChHHH---HHhccCCCcE-EEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHH
Q 009753 37 HQSIVQIIVDGRDTNAV---DKEGCQLPTL-VYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGD 112 (526)
Q Consensus 37 ~~~~v~VldD~~~~~~~---~~~~~~~p~v-~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~ 112 (526)
.+.+|.|+||+++|++. ++...+.|.. +++..+++ .||++|+|.|++. +++|+|+.+|+|... +|+
T Consensus 29 ~~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~~~g~~~----a~gd~i~~ld~D~~~-~~~ 98 (211)
T cd04188 29 FSYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKN-----RGKGGAVRAGMLA----ARGDYILFADADLAT-PFE 98 (211)
T ss_pred CCEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccC-----CCcHHHHHHHHHH----hcCCEEEEEeCCCCC-CHH
Confidence 35689999999998743 3333345554 67776654 5799999999998 889999999999999 799
Q ss_pred HHHHHHHHhhcccCCCcEEEEecCcccccCC--cc-ccchhhHHHHHHHHHHHHhhcCCeeeecc-ceeEehhhhcCCCC
Q 009753 113 AIREALCFLLDEKREHEIAFVQHPQRFDNIC--KN-DLYANSYLVVNQVELAGIGSYDAALYCGT-GCFHRRESLSGAKY 188 (526)
Q Consensus 113 ~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~--~~-d~~~~~~~~f~~~~~~g~d~~~~~~~~Gt-g~~~RR~aL~~~~~ 188 (526)
.+.+++..+.++ ....|.+........ .. ..+.+.....+........+... .-+.+ ..++||+++...
T Consensus 99 ~l~~l~~~~~~~----~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~g~~~~~r~~~~~~-- 171 (211)
T cd04188 99 ELEKLEEALKTS----GYDIAIGSRAHLASAAVVKRSWLRNLLGRGFNFLVRLLLGLGI-KDTQCGFKLFTRDAARRL-- 171 (211)
T ss_pred HHHHHHHHHhcc----CCcEEEEEeeccCCcccccccHHHHHHHHHHHHHHHHHcCCCC-cccccCceeEcHHHHHHH--
Confidence 999999986544 234444443332211 10 11111111111122222212211 11233 368999988642
Q ss_pred CccccccccccCCCCcChHHHHHhhchhccccccccCccccccC-CCCCCccchHHHHHHHHhCCCeEEEeCC
Q 009753 189 PKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMG-LVYGCAAEDVVTGLTIQCRGWKSMYFKP 260 (526)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG-~~~~svtED~~t~~rl~~~Gwrs~y~~~ 260 (526)
++ .......+|+++.+++...||++.+++-
T Consensus 172 ------------------------------------------~~~~~~~~~~~d~el~~r~~~~g~~~~~vpi 202 (211)
T cd04188 172 ------------------------------------------FPRLHLERWAFDVELLVLARRLGYPIEEVPV 202 (211)
T ss_pred ------------------------------------------HhhhhccceEeeHHHHHHHHHcCCeEEEcCc
Confidence 11 1111234799999999999999998863
No 55
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.14 E-value=6.2e-11 Score=107.43 Aligned_cols=134 Identities=20% Similarity=0.269 Sum_probs=85.1
Q ss_pred CceEEEEeCCCChHHHHHh---ccCC-CcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHH
Q 009753 38 QSIVQIIVDGRDTNAVDKE---GCQL-PTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDA 113 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~---~~~~-p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~ 113 (526)
+..|.|+||++++++.+.. .... +.+.++..+++ .+|+.|+|.+++. +++|+++++|+|..+ .|++
T Consensus 26 ~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~n~~~~~----~~~~~i~~~D~D~~~-~~~~ 95 (180)
T cd06423 26 KLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKEN-----GGKAGALNAGLRH----AKGDIVVVLDADTIL-EPDA 95 (180)
T ss_pred ceEEEEEeCCCccchHHHHHHHhccccceEEEEEeccc-----CCchHHHHHHHHh----cCCCEEEEECCCCCc-ChHH
Confidence 5679999999998743332 2222 44666666654 6899999999998 799999999999999 7999
Q ss_pred HHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHH----HHHHHHHHhhcC-CeeeeccceeEehhhhcC
Q 009753 114 IREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVV----NQVELAGIGSYD-AALYCGTGCFHRRESLSG 185 (526)
Q Consensus 114 L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f----~~~~~~g~d~~~-~~~~~Gtg~~~RR~aL~~ 185 (526)
|++++..+.. +++++.|.......+...+ .+....... ......+..... ...+.|+++++||+++..
T Consensus 96 l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 168 (180)
T cd06423 96 LKRLVVPFFA---DPKVGAVQGRVRVRNGSEN-LLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALRE 168 (180)
T ss_pred HHHHHHHhcc---CCCeeeEeeeEEEecCcCc-ceeccchheecceeeeeeehhheecceeecCchHHHHHHHHHHH
Confidence 9999555542 2367777655544332211 111111110 111111111122 245789999999999975
No 56
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.14 E-value=2.1e-09 Score=117.08 Aligned_cols=168 Identities=18% Similarity=0.121 Sum_probs=107.7
Q ss_pred CCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCcccc-chhhHHHHH-HHHHHHHhhc-CCee-
Q 009753 95 NGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDL-YANSYLVVN-QVELAGIGSY-DAAL- 170 (526)
Q Consensus 95 ~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~-~~~~~~~f~-~~~~~g~d~~-~~~~- 170 (526)
..|||+.+|||+.+ +|+.+.+++.-+. .+++++.|.+--+..|...+.. ..+..+.+. +..+++.... |+..
T Consensus 201 ~~~~il~~DaDt~~-~p~~~~~lv~~m~---~d~~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish~l~Ka~Es~fG~VtC 276 (527)
T PF03142_consen 201 FYEYILMVDADTKF-DPDSVNRLVDAME---RDPKIGGVCGETRIDNKGQSWWTMYQVFEYAISHHLQKAFESVFGSVTC 276 (527)
T ss_pred ceEEEEEecCCceE-cHHHHHHHHHHHc---CCCCeEEEeceeEEcCCCCCHhhheeccchhHHHHHHHHHHHHhCceee
Confidence 46999999999999 8999999998885 2348888887656666543321 112222222 3555666554 4433
Q ss_pred eeccceeEehhhhcCCCC-CccccccccccCCCCcChHHHHHhhchhccccccccCccccccCC---CCCCccchHHHHH
Q 009753 171 YCGTGCFHRRESLSGAKY-PKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGL---VYGCAAEDVVTGL 246 (526)
Q Consensus 171 ~~Gtg~~~RR~aL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~---~~~svtED~~t~~ 246 (526)
+.|..+++|-+|+....- ...... -.++++. |..+. ..+. .-..+.||-.++.
T Consensus 277 LPGcfsmyR~~a~~~~~~~~~p~l~-----------~~~i~~~--------Y~~~~----~dtlh~~nl~~lGEDR~Ltt 333 (527)
T PF03142_consen 277 LPGCFSMYRISALMDGDGYWVPLLI-----------SPDIIEK--------YSENP----VDTLHQKNLLDLGEDRWLTT 333 (527)
T ss_pred cCCcceeeeeehhcccccccccccc-----------chHHHHH--------Hhhcc----chHHHHHhhhhcchhHHHHH
Confidence 478888999999975210 000000 0011110 00000 0000 1125789999997
Q ss_pred HHHhC--CCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHH
Q 009753 247 TIQCR--GWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIF 291 (526)
Q Consensus 247 rl~~~--Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~ 291 (526)
.|.++ |||..|++.. ..++.+|++++.+++||+||..|++--+
T Consensus 334 LlLk~~~~~k~~y~~~A--~a~T~aP~t~~vflsQRRRWinSTi~Nl 378 (527)
T PF03142_consen 334 LLLKQFPGYKTEYVPSA--VAYTDAPETFSVFLSQRRRWINSTIHNL 378 (527)
T ss_pred HHHhhCCCceEEEcccc--cccccCCccHHHHHHHhhhccchhHhhH
Confidence 77776 8999999884 4589999999999999999999998543
No 57
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.07 E-value=2.1e-09 Score=109.21 Aligned_cols=174 Identities=16% Similarity=0.132 Sum_probs=109.1
Q ss_pred CCCceEEEEeCCCChHHHH---HhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHH
Q 009753 36 DHQSIVQIIVDGRDTNAVD---KEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGD 112 (526)
Q Consensus 36 ~~~~~v~VldD~~~~~~~~---~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~ 112 (526)
+...+|.|+||++.++..+ ..........|+.-+... ..-++|.|.|.|++. +++|+|+++|+|+++ .|+
T Consensus 32 ~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~~--~~f~~a~arN~g~~~----A~~d~l~flD~D~i~-~~~ 104 (281)
T PF10111_consen 32 DPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDNG--EPFSRAKARNIGAKY----ARGDYLIFLDADCIP-SPD 104 (281)
T ss_pred CCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCCC--CCcCHHHHHHHHHHH----cCCCEEEEEcCCeee-CHH
Confidence 3345788999999876322 222223334477655421 124899999999999 899999999999999 799
Q ss_pred HHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhH-----HHHH-HHHHHHHhhcCCeeeeccceeEehhhhcCC
Q 009753 113 AIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSY-----LVVN-QVELAGIGSYDAALYCGTGCFHRRESLSGA 186 (526)
Q Consensus 113 ~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~-----~~f~-~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~ 186 (526)
++.+++.+..+-..+ .-+++-.|..+.+......+.... ..+. +......+.++.....|++.+++|+.+..+
T Consensus 105 ~i~~~~~~~~~l~~~-~~~~~~~p~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~i 183 (281)
T PF10111_consen 105 FIEKLLNHVKKLDKN-PNAFLVYPCLYLSEEGSEKFYSQFKNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLEI 183 (281)
T ss_pred HHHHHHHHHHHHhcC-CCceEEEeeeeccchhhHHHhhcchhcchHHHHHHHhhccccccccccccceEEEEEHHHHHHh
Confidence 999999832211011 234555566655543222221111 1111 111111222332334668889999999653
Q ss_pred CCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCC---ccchHHHHHHHHhCCCeEEEeCCC
Q 009753 187 KYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGC---AAEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~s---vtED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
|||++.= =.||+|.+.||...|.+..++++.
T Consensus 184 --------------------------------------------GGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~ 217 (281)
T PF10111_consen 184 --------------------------------------------GGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDY 217 (281)
T ss_pred --------------------------------------------CCCCccccCCCcchHHHHHHHHHcCCcEecChHH
Confidence 6776542 269999999999999999887664
No 58
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.05 E-value=2.1e-10 Score=103.91 Aligned_cols=138 Identities=17% Similarity=0.145 Sum_probs=90.4
Q ss_pred CCCceEEEEeCCCChHHH---HHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHH
Q 009753 36 DHQSIVQIIVDGRDTNAV---DKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGD 112 (526)
Q Consensus 36 ~~~~~v~VldD~~~~~~~---~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~ 112 (526)
+++.+|.|+||+++|++. ++.....+++.|+.++++ .++++|+|.|++. +.++|++++|+|.++ .|+
T Consensus 25 ~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~-~~~ 94 (169)
T PF00535_consen 25 DPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPEN-----LGFSAARNRGIKH----AKGEYILFLDDDDII-SPD 94 (169)
T ss_dssp GCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TT
T ss_pred CCCEEEEEecccccccccccccccccccccccccccccc-----ccccccccccccc----cceeEEEEeCCCceE-cHH
Confidence 456789999999977643 333223678999999986 5899999999999 899999999999999 699
Q ss_pred HHHHHHHHhhcccCCCcEEEEecCcccccCCccccchh--hHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcC
Q 009753 113 AIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN--SYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSG 185 (526)
Q Consensus 113 ~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (526)
+|.+++..+.+. +..+.....+....+......... .....+..............++|+++++||++++.
T Consensus 95 ~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 167 (169)
T PF00535_consen 95 WLEELVEALEKN--PPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEE 167 (169)
T ss_dssp HHHHHHHHHHHC--TTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHH
T ss_pred HHHHHHHHHHhC--CCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHh
Confidence 999999999863 223333332222221111111000 11122223334445566778999999999999863
No 59
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.00 E-value=1.8e-09 Score=100.91 Aligned_cols=135 Identities=14% Similarity=0.099 Sum_probs=89.3
Q ss_pred CCceEEEEeCCCChHH---HHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHH
Q 009753 37 HQSIVQIIVDGRDTNA---VDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDA 113 (526)
Q Consensus 37 ~~~~v~VldD~~~~~~---~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~ 113 (526)
++.+|.|+||+++|++ ++....+.+.++++..+++ .+|++|+|.+++. +.+|+++++|+|..+ .|++
T Consensus 27 ~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~ 96 (185)
T cd04179 27 YDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRN-----FGKGAAVRAGFKA----ARGDIVVTMDADLQH-PPED 96 (185)
T ss_pred CCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCC-----CCccHHHHHHHHH----hcCCEEEEEeCCCCC-CHHH
Confidence 4778999999998774 3344456777888887775 5799999999999 889999999999999 7999
Q ss_pred HHHHHHHhhcccCCCcEEEEecCcccccCCc-cccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcC
Q 009753 114 IREALCFLLDEKREHEIAFVQHPQRFDNICK-NDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSG 185 (526)
Q Consensus 114 L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~-~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (526)
|.+++..+.++ +.++|..+....+... ...+.......+................|...++||+++..
T Consensus 97 l~~l~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 165 (185)
T cd04179 97 IPKLLEKLLEG----GADVVIGSRFVRGGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEA 165 (185)
T ss_pred HHHHHHHHhcc----CCcEEEEEeecCCCcccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHH
Confidence 99999986543 3566666655443211 11111111111111111212222333456667899999965
No 60
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.99 E-value=4.8e-09 Score=109.13 Aligned_cols=199 Identities=12% Similarity=0.042 Sum_probs=120.1
Q ss_pred ccCCCC-ceEEEEeCCCChHH---HHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCC
Q 009753 33 TKQDHQ-SIVQIIVDGRDTNA---VDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYA 108 (526)
Q Consensus 33 ~~~~~~-~~v~VldD~~~~~~---~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~ 108 (526)
..|+++ -+|.|+||||+|++ +++...+.|++.+++.+ | .|.++|.|.|++. ++||||+.+|+|..+
T Consensus 29 ~~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~-n-----~G~~~arN~gl~~----a~g~yi~flD~DD~~ 98 (328)
T PRK10073 29 IAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQA-N-----AGVSVARNTGLAV----ATGKYVAFPDADDVV 98 (328)
T ss_pred HhCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEECC-C-----CChHHHHHHHHHh----CCCCEEEEECCCCcc
Confidence 345554 57999999999873 44444567889988643 3 6899999999998 899999999999999
Q ss_pred CcHHHHHHHHHHhhcccCCCcEEEEecCcccccC-Cc------cccchhhHHHH--HHHHHHHHhhcCCeeeeccceeEe
Q 009753 109 NDGDAIREALCFLLDEKREHEIAFVQHPQRFDNI-CK------NDLYANSYLVV--NQVELAGIGSYDAALYCGTGCFHR 179 (526)
Q Consensus 109 ~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~-~~------~d~~~~~~~~f--~~~~~~g~d~~~~~~~~Gtg~~~R 179 (526)
+|+.+++++..+.++ +.+++.... ..+++. .. .+..... .++ .+.+........ -.....+.++|
T Consensus 99 -~p~~l~~l~~~~~~~--~~dvv~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~-~~~~~~~~l~R 172 (328)
T PRK10073 99 -YPTMYETLMTMALED--DLDVAQCNA-DWCFRDTGETWQSIPSDRLRST-GVLSGPDWLRMALSSRR-WTHVVWLGVYR 172 (328)
T ss_pred -ChhHHHHHHHHHHhC--CCCEEEEcc-EEEEeCCCcccccccccccccc-ceechHHHHHHHHhhCC-CCccHhHHHHH
Confidence 799999999887643 234443321 111111 00 0111000 000 001111111111 01122345899
Q ss_pred hhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeC
Q 009753 180 RESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFK 259 (526)
Q Consensus 180 R~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~ 259 (526)
|+.+... ...|+.+...||+...+++..++.|+.|++
T Consensus 173 r~~l~~~-------------------------------------------~~~f~~~~~~eD~~~~~~~~~~~~~v~~~~ 209 (328)
T PRK10073 173 RDFIVKN-------------------------------------------NIKFEPGLHHQDIPWTTEVMFNALRVRYTE 209 (328)
T ss_pred HHHHHHc-------------------------------------------CCccCCCCEeccHHHHHHHHHHCCEEEEEC
Confidence 9988642 123666666799999999999999999998
Q ss_pred CCCCceeeccCCCHHH---HHHHHhhhhhhhHHHH
Q 009753 260 PNKPAFLGVAPVTLDI---ALVQMKRWSEGMFQIF 291 (526)
Q Consensus 260 ~~~~~~~g~aP~~l~~---~~~Qr~RWa~G~lqi~ 291 (526)
++. ..+-.-+.+... .-+++.++....++++
T Consensus 210 ~~l-y~Yr~~~~Sis~~~~~~~~~~~~~~~~~~i~ 243 (328)
T PRK10073 210 QSL-YKYYLHDTSVSRLPRQGNKNLNYQRHYIKIT 243 (328)
T ss_pred CCE-EEEEecCCcccCCCCcchHHHHHHHHHHHHH
Confidence 853 223333333322 1233455666666653
No 61
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.92 E-value=2.7e-08 Score=99.48 Aligned_cols=158 Identities=13% Similarity=0.048 Sum_probs=97.7
Q ss_pred CceEEEEeCCCChHHHHHhcc--CCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHH
Q 009753 38 QSIVQIIVDGRDTNAVDKEGC--QLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIR 115 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~~~--~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~ 115 (526)
+.+|.|+||+|+|.+.+.... ...++.+++. ++ +|+++|+|.|++. ++||+|+.+|+|... +|+.++
T Consensus 33 ~~EiIVvDdgStD~t~~i~~~~~~~~~i~~i~~-~~-----~G~~~A~N~Gi~~----a~g~~v~~ld~DD~~-~~~~~~ 101 (248)
T PRK10063 33 SFEWIVVDGGSNDGTREFLENLNGIFNLRFVSE-PD-----NGIYDAMNKGIAM----AQGRFALFLNSGDIF-HQDAAN 101 (248)
T ss_pred CEEEEEEECcCcccHHHHHHHhcccCCEEEEEC-CC-----CCHHHHHHHHHHH----cCCCEEEEEeCCccc-CcCHHH
Confidence 457999999999875443321 1124777753 32 5899999999998 899999999999999 688765
Q ss_pred HHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCcccccc
Q 009753 116 EALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNI 195 (526)
Q Consensus 116 ~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~ 195 (526)
........ ++...++- ..... ............ +..........++.+.++||+.+..
T Consensus 102 ~~~~~~~~---~~~~~v~g-~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---------- 159 (248)
T PRK10063 102 FVRQLKMQ---KDNAMIIG-DALLD-FGDGHKIKRSAK-------PGWYIYHSLPASHQAIFFPVSGLKK---------- 159 (248)
T ss_pred HHHHHHhC---CCCeEEEe-eeEEE-cCCCcEEEEccC-------ChhHHhcCCCCCCcEEEEEHHHHhc----------
Confidence 43333322 22333332 22111 111111110000 0000011123456778899988753
Q ss_pred ccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC-CccchHHHHHHHHhCCCeEEEeCCCCC
Q 009753 196 NEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG-CAAEDVVTGLTIQCRGWKSMYFKPNKP 263 (526)
Q Consensus 196 ~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~-svtED~~t~~rl~~~Gwrs~y~~~~~~ 263 (526)
+||+.. ...||.++.+|+..+|++..+++....
T Consensus 160 -----------------------------------~~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l~ 193 (248)
T PRK10063 160 -----------------------------------WRYDLQYKVSSDYALAARLYKAGYAFKKLNGLVS 193 (248)
T ss_pred -----------------------------------CCCCcccchHHhHHHHHHHHHcCCcEEEcCceeE
Confidence 456544 467999999999999999999987643
No 62
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.91 E-value=1.1e-08 Score=95.76 Aligned_cols=129 Identities=12% Similarity=0.139 Sum_probs=84.3
Q ss_pred CceEEEEeCCCChHH---HHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHH
Q 009753 38 QSIVQIIVDGRDTNA---VDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAI 114 (526)
Q Consensus 38 ~~~v~VldD~~~~~~---~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L 114 (526)
+.+|.|+||+++|++ ++....+.|++.++..+++ .+|++|+|.+++. +.+|+++.+|+|..+ +|++|
T Consensus 29 ~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~n~g~~~----a~~d~i~~~D~D~~~-~~~~l 98 (181)
T cd04187 29 DYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRN-----FGQQAALLAGLDH----ARGDAVITMDADLQD-PPELI 98 (181)
T ss_pred CeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCC-----CCcHHHHHHHHHh----cCCCEEEEEeCCCCC-CHHHH
Confidence 567999999999873 3344445678888887764 5899999999998 889999999999999 79999
Q ss_pred HHHHHHhhcccCCCcEEEEecCcccccCCccccchhh-HHHHHHHHHHHHhhcCCeeeeccceeEehhhhcC
Q 009753 115 REALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS-YLVVNQVELAGIGSYDAALYCGTGCFHRRESLSG 185 (526)
Q Consensus 115 ~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (526)
.+++..+. + +.++.... ....+ ....... ...++. ......+..-+...|+..++||+++..
T Consensus 99 ~~l~~~~~-~--~~~~v~g~--~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~ 161 (181)
T cd04187 99 PEMLAKWE-E--GYDVVYGV--RKNRK---ESWLKRLTSKLFYR-LINKLSGVDIPDNGGDFRLMDRKVVDA 161 (181)
T ss_pred HHHHHHHh-C--CCcEEEEE--ecCCc---chHHHHHHHHHHHH-HHHHHcCCCCCCCCCCEEEEcHHHHHH
Confidence 99998853 3 22333322 21111 1111111 112221 112222233344577788999999975
No 63
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.90 E-value=2.5e-08 Score=112.51 Aligned_cols=166 Identities=18% Similarity=0.150 Sum_probs=110.6
Q ss_pred CcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhh-cccCCCcEEEEecCcccccCCccccchhhHHHHH
Q 009753 78 FKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKNDLYANSYLVVN 156 (526)
Q Consensus 78 ~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~ 156 (526)
.|--.+|.+... .+.+-+||+++|+|+.+ +|+++.+++.-|. || +||-+.+ +..|.-.. .+...|..-|
T Consensus 425 ~~r~~~y~~~~~--L~~~v~~il~vD~dT~~-~P~ai~~lv~~f~~dp----~VggaCG--~I~~~~~~-w~v~~Q~FEY 494 (862)
T KOG2571|consen 425 QHRWVMYTAFKA--LMPSVDYILVVDADTRL-DPDALYHLVKVFDEDP----QVGGACG--RILNKGGS-WVVAYQNFEY 494 (862)
T ss_pred HHHHHHHHHHHH--hcCcceEEEEecCCCcc-CcHHHHHHHHHhccCc----ccceecc--ccccCCCc-eEEeHHHHHH
Confidence 344445555554 34566799999999999 7999999999996 55 7787776 33443222 2222222222
Q ss_pred ---HHHHHHHhhcCCeee--eccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCcccccc
Q 009753 157 ---QVELAGIGSYDAALY--CGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM 231 (526)
Q Consensus 157 ---~~~~~g~d~~~~~~~--~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~g 231 (526)
...++.-+..=|.+. .|.-++||-+||.+-.. ++. | ..+.=|..-
T Consensus 495 ~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~--~~~---------------------------y-~~~~~~~~~ 544 (862)
T KOG2571|consen 495 AISHNLQKATESVFGCVSCLPGCFSLYRASALMDQFV--EYF---------------------------Y-GEKFSGPRH 544 (862)
T ss_pred HHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcchH--Hhh---------------------------h-chhhcCccc
Confidence 345666665545443 56666899999975310 000 0 000000012
Q ss_pred CCCCCCccchHHHHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhh
Q 009753 232 GLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEG 286 (526)
Q Consensus 232 G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 286 (526)
|..+ +..||-.+..++..+||+..||... ....++|+++.+++.||+||..|
T Consensus 545 ~~~~-~~geDR~L~~~llskgy~l~Y~a~s--~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 545 GIQY-SLGEDRWLCTLLLSKGYRLKYVAAS--DAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred cccc-ccchhHHHHHHHHhccceeeeeccc--cccccCcHhHHHHHHHhhhhccc
Confidence 3444 4999999999999999999999885 44799999999999999999999
No 64
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.85 E-value=6.3e-08 Score=98.58 Aligned_cols=194 Identities=15% Similarity=0.078 Sum_probs=115.5
Q ss_pred cccCCCC-ceEEEEeCCCChH-HHHHhc--cCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC
Q 009753 32 VTKQDHQ-SIVQIIVDGRDTN-AVDKEG--CQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY 107 (526)
Q Consensus 32 ~~~~~~~-~~v~VldD~~~~~-~~~~~~--~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~ 107 (526)
...|+|| -+|.|+||+|++. ..++.. ...|++.|+..+++ .|++.|+|.|++. ++||||+.+|+|..
T Consensus 27 vl~Qt~~~~EiIVVDDgS~~~~~~~~~~~~~~~~ri~~i~~~~n-----~G~~~a~N~gi~~----a~g~~I~~lDaDD~ 97 (279)
T PRK10018 27 VLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDIN-----SGACAVRNQAIML----AQGEYITGIDDDDE 97 (279)
T ss_pred HHhCCCCCeEEEEEECCCCCHHHHHHHHHHcCCCCEEEEECCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCC
Confidence 3456676 4799999999852 222221 13578999987765 7899999999998 89999999999999
Q ss_pred CCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCc-cc----c-chhhHHHHHHHHHHHHhhcCCeeeeccceeEehh
Q 009753 108 ANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICK-ND----L-YANSYLVVNQVELAGIGSYDAALYCGTGCFHRRE 181 (526)
Q Consensus 108 ~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~-~d----~-~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~ 181 (526)
. .|+.|.+.+.++.. .+..+++-+.....+... +. + +... ..-++... . ..+.|...+.++.
T Consensus 98 ~-~p~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~-~------~n~ig~~~~~~~~ 165 (279)
T PRK10018 98 W-TPNRLSVFLAHKQQ---LVTHAFLYANDYVCQGEVYSQPASLPLYPKS-PYSRRLFY-K------RNIIGNQVFTWAW 165 (279)
T ss_pred C-CccHHHHHHHHHHh---CCCccEEEccceeecCcccccccccCCCCCC-CCCHHHHH-H------hcCcCceeeehhh
Confidence 9 69999999988753 123444433321111000 00 0 0000 00000000 0 1133444444444
Q ss_pred hhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC-CccchHHHHHHHHhCCCeEEEeCC
Q 009753 182 SLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG-CAAEDVVTGLTIQCRGWKSMYFKP 260 (526)
Q Consensus 182 aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~-svtED~~t~~rl~~~Gwrs~y~~~ 260 (526)
.+. .+||+.. ...||.++-+|+..+|++..++++
T Consensus 166 ~~~---------------------------------------------~~~fd~~~~~~eDydlwlrl~~~~~~~~~~~~ 200 (279)
T PRK10018 166 RFK---------------------------------------------ECLFDTELKAAQDYDIFLRMVVEYGEPWKVEE 200 (279)
T ss_pred hhh---------------------------------------------hcccCCCCCccccHHHHHHHHHhcCceEeecc
Confidence 332 1466444 568999999999999999888887
Q ss_pred CCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhh
Q 009753 261 NKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSK 294 (526)
Q Consensus 261 ~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~ 294 (526)
.. +.+-..+.+.+......+ .++..+++.++
T Consensus 201 ~l-~~y~~~~~s~~~~~s~~k--~~~~~~~~rk~ 231 (279)
T PRK10018 201 AT-QILHINHGEMQITSSPKK--FSGYFHFYRKH 231 (279)
T ss_pred ce-EEEEcCCCCccccCCHHH--HHHHHHHHHHh
Confidence 53 344555665522222222 45566766644
No 65
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.82 E-value=1.8e-08 Score=103.54 Aligned_cols=173 Identities=18% Similarity=0.154 Sum_probs=113.9
Q ss_pred ccCCCCce-EEEEeCCCChHHHHHhccC-CCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCc-EEEEeCCCCCCC
Q 009753 33 TKQDHQSI-VQIIVDGRDTNAVDKEGCQ-LPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGP-VILNLDCDMYAN 109 (526)
Q Consensus 33 ~~~~~~~~-v~VldD~~~~~~~~~~~~~-~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~-~i~ilDaD~~~~ 109 (526)
.+++++.. +.++|+++.|...+..... .|++.++...+| .|=||+.|.+++... .+++ ++++++-|+++
T Consensus 26 ~~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~v~~i~~~~N-----lG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~- 97 (305)
T COG1216 26 AAQTYPDDVIVVVDNGSTDGSLEALKARFFPNVRLIENGEN-----LGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVV- 97 (305)
T ss_pred hcCCCCCcEEEEccCCCCCCCHHHHHhhcCCcEEEEEcCCC-----ccchhhhhHHHHHHh--cCCCcEEEEEcCCeee-
Confidence 35555554 3367888888765555555 799999999887 567889999998832 4444 99999999999
Q ss_pred cHHHHHHHHHHhhcccCCCcEEEEecCcccccCCcc-ccchhhHHH---------HHHHH--HHHHhhcCCeeeecccee
Q 009753 110 DGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN-DLYANSYLV---------VNQVE--LAGIGSYDAALYCGTGCF 177 (526)
Q Consensus 110 ~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~-d~~~~~~~~---------f~~~~--~~g~d~~~~~~~~Gtg~~ 177 (526)
+|++|.+++..+.+. +.++.|+.....++.... +..+..... .++.. ....+... +.++|++++
T Consensus 98 ~~~~l~~ll~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~l 173 (305)
T COG1216 98 EPDLLEELLKAAEED---PAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVV-ASLSGACLL 173 (305)
T ss_pred ChhHHHHHHHHHHhC---CCCeEeeeeEecCCCCcchheeccccccccccceecccccccccccchhhhh-hhcceeeeE
Confidence 799999999988732 366777655443331110 001000000 00000 00000000 047899999
Q ss_pred EehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC--CccchHHHHHHHHhCCCeE
Q 009753 178 HRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG--CAAEDVVTGLTIQCRGWKS 255 (526)
Q Consensus 178 ~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~--svtED~~t~~rl~~~Gwrs 255 (526)
+||+++..+ |||+.+ .-.||++.++|+...||++
T Consensus 174 i~~~~~~~v--------------------------------------------G~~de~~F~y~eD~D~~~R~~~~G~~i 209 (305)
T COG1216 174 IRREAFEKV--------------------------------------------GGFDERFFIYYEDVDLCLRARKAGYKI 209 (305)
T ss_pred EcHHHHHHh--------------------------------------------CCCCcccceeehHHHHHHHHHHcCCeE
Confidence 999999753 566554 4579999999999999999
Q ss_pred EEeCCC
Q 009753 256 MYFKPN 261 (526)
Q Consensus 256 ~y~~~~ 261 (526)
.|++..
T Consensus 210 ~~~p~a 215 (305)
T COG1216 210 YYVPDA 215 (305)
T ss_pred EEeecc
Confidence 999874
No 66
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.80 E-value=5.7e-08 Score=85.70 Aligned_cols=86 Identities=24% Similarity=0.251 Sum_probs=62.6
Q ss_pred CceEEEEeCCCChHHHHHh---ccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHH
Q 009753 38 QSIVQIIVDGRDTNAVDKE---GCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAI 114 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~---~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L 114 (526)
+.+++|+||+++++..+.. ....+...++.+++ ..+|++++|.+++. .++|+++++|+|.++ +|+++
T Consensus 26 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~-~~~~~ 95 (156)
T cd00761 26 NFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEE-----NQGLAAARNAGLKA----ARGEYILFLDADDLL-LPDWL 95 (156)
T ss_pred ceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecC-----CCChHHHHHHHHHH----hcCCEEEEECCCCcc-CccHH
Confidence 5679999999987743322 21223455666555 37899999999998 689999999999999 79999
Q ss_pred HHHHHHhhcccCCCcEEEEecC
Q 009753 115 REALCFLLDEKREHEIAFVQHP 136 (526)
Q Consensus 115 ~~~v~~f~d~~~~~~va~VQ~p 136 (526)
...+..+.. +++.+.|+++
T Consensus 96 ~~~~~~~~~---~~~~~~v~~~ 114 (156)
T cd00761 96 ERLVAELLA---DPEADAVGGP 114 (156)
T ss_pred HHHHHHHhc---CCCceEEecc
Confidence 987554432 2367777765
No 67
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.67 E-value=4.8e-07 Score=94.42 Aligned_cols=88 Identities=19% Similarity=0.183 Sum_probs=66.5
Q ss_pred CceEEEEeCCCChHHHHHh---ccC----CCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCc
Q 009753 38 QSIVQIIVDGRDTNAVDKE---GCQ----LPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYAND 110 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~---~~~----~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~ 110 (526)
+.+|.|+||||+|++.+.. ..+ .+.+.++..++| .||++|+|.|++. +.||+|+++|||... +
T Consensus 107 ~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~N-----~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~-~ 176 (333)
T PTZ00260 107 KYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRN-----KGKGGAVRIGMLA----SRGKYILMVDADGAT-D 176 (333)
T ss_pred CEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCCC-----CChHHHHHHHHHH----ccCCEEEEEeCCCCC-C
Confidence 5689999999998754432 222 235888877765 6899999999998 889999999999999 7
Q ss_pred HHHHHHHHHHhhcccCCCcEEEEecC
Q 009753 111 GDAIREALCFLLDEKREHEIAFVQHP 136 (526)
Q Consensus 111 p~~L~~~v~~f~d~~~~~~va~VQ~p 136 (526)
|+.+.+++..+.+-+ ++.+++|.+-
T Consensus 177 ~~~l~~l~~~l~~~~-~~~~dvV~Gs 201 (333)
T PTZ00260 177 IDDFDKLEDIMLKIE-QNGLGIVFGS 201 (333)
T ss_pred HHHHHHHHHHHHHhh-ccCCceEEee
Confidence 999999988876411 1245666554
No 68
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=98.39 E-value=1.4e-05 Score=83.21 Aligned_cols=75 Identities=17% Similarity=0.172 Sum_probs=59.9
Q ss_pred CceEEEEeCCCChHHHHHh---ccC-CCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHH
Q 009753 38 QSIVQIIVDGRDTNAVDKE---GCQ-LPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDA 113 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~---~~~-~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~ 113 (526)
+.+|.|+||||+|.+.+.. .++ .++++.+..++| .||++|+|.|+++ ++||+++++|||... +|+.
T Consensus 38 ~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n-----~G~~~A~~~G~~~----A~gd~vv~~DaD~q~-~p~~ 107 (325)
T PRK10714 38 EYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRN-----YGQHSAIMAGFSH----VTGDLIITLDADLQN-PPEE 107 (325)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCC-----CCHHHHHHHHHHh----CCCCEEEEECCCCCC-CHHH
Confidence 5689999999998754432 222 345666655543 6899999999998 899999999999999 7999
Q ss_pred HHHHHHHhh
Q 009753 114 IREALCFLL 122 (526)
Q Consensus 114 L~~~v~~f~ 122 (526)
+.+++..+.
T Consensus 108 i~~l~~~~~ 116 (325)
T PRK10714 108 IPRLVAKAD 116 (325)
T ss_pred HHHHHHHHH
Confidence 999998875
No 69
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=98.21 E-value=4.4e-06 Score=86.22 Aligned_cols=88 Identities=19% Similarity=0.241 Sum_probs=62.0
Q ss_pred CCceEEEEeCCCChHHHHHhccCCCcEEEEEccCC-CC-CCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC-CCcHHH
Q 009753 37 HQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKR-PG-CPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY-ANDGDA 113 (526)
Q Consensus 37 ~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~-p~-~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~-~~~p~~ 113 (526)
.+.+|.|+||+|+|++.+.....- ..++.+.+. +. ....+|++|+|.+++. +++|+++++|||.. + +|++
T Consensus 61 ~~~EIIVVDDgStD~T~~ia~~~~--~~v~~~~~~~~~~~~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~-~p~~ 133 (306)
T PRK13915 61 LVDELIVIDSGSTDATAERAAAAG--ARVVSREEILPELPPRPGKGEALWRSLAA----TTGDIVVFVDADLINF-DPMF 133 (306)
T ss_pred CCcEEEEEeCCCccHHHHHHHHhc--chhhcchhhhhccccCCCHHHHHHHHHHh----cCCCEEEEEeCccccC-CHHH
Confidence 456899999999988544332111 222222110 00 1136899999999998 89999999999997 6 7999
Q ss_pred HHHHHHHhh-cccCCCcEEEEec
Q 009753 114 IREALCFLL-DEKREHEIAFVQH 135 (526)
Q Consensus 114 L~~~v~~f~-d~~~~~~va~VQ~ 135 (526)
|.+++..+. |+ ++++|.+
T Consensus 134 l~~l~~~l~~~~----~~~~V~g 152 (306)
T PRK13915 134 VPGLLGPLLTDP----GVHLVKA 152 (306)
T ss_pred HHHHHHHHHhCC----CceEEEE
Confidence 999998886 55 5777764
No 70
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.06 E-value=2.7e-06 Score=87.42 Aligned_cols=198 Identities=22% Similarity=0.256 Sum_probs=133.4
Q ss_pred cccCccccCCCCceEEEEeCCCChHHH---HHhccCCCcE---EEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEE
Q 009753 27 EWNCKVTKQDHQSIVQIIVDGRDTNAV---DKEGCQLPTL---VYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVIL 100 (526)
Q Consensus 27 ~~~~~~~~~~~~~~v~VldD~~~~~~~---~~~~~~~p~v---~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ 100 (526)
.|.+-.+.+.|+.++..+-++++|++. +.+=+.+|++ ..+.-++- .-+-|-.|+=-|.+. .++|+|+
T Consensus 103 Nlesffts~Y~~~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~v---g~npKInN~mpgy~~----a~ydlvl 175 (431)
T KOG2547|consen 103 NLESFFTSQYHKYELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKV---GLNPKINNMMPGYRA----AKYDLVL 175 (431)
T ss_pred hHHHHHhhccCceEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEccccc---ccChhhhccCHHHHH----hcCCEEE
Confidence 455557788999997777666766633 3333467755 44555542 145688888888888 8999999
Q ss_pred EeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEE-ecCcccccCCccccchhhHHHHHHHHHHHHhhc-----CCeeeecc
Q 009753 101 NLDCDMYANDGDAIREALCFLLDEKREHEIAFV-QHPQRFDNICKNDLYANSYLVVNQVELAGIGSY-----DAALYCGT 174 (526)
Q Consensus 101 ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~V-Q~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~-----~~~~~~Gt 174 (526)
+.|.|-.+ .||.+..+..-|+.++ ++|+| |+| .+.+....| .+-++ ++|...+ .+--+ +-.+..|-
T Consensus 176 isDsgI~m-~pdtildm~t~M~she---kmalvtq~p-y~~dr~Gf~-atle~-~~fgTsh-~r~yl~~n~~~~~c~tgm 247 (431)
T KOG2547|consen 176 ISDSGIFM-KPDTILDMATTMMSHE---KMALVTQTP-YCKDRQGFD-ATLEQ-VYFGTSH-PRIYLSGNVLGFNCSTGM 247 (431)
T ss_pred EecCCeee-cCchHHHHHHhhhccc---ceeeecCCc-eeeccccch-hhhhh-eeeccCC-ceEEEccccccccccccH
Confidence 99999999 8999999998888654 89999 555 333332211 11111 3332221 11112 22234677
Q ss_pred ceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCC--CCCccchHHHHHHHHhCC
Q 009753 175 GCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLV--YGCAAEDVVTGLTIQCRG 252 (526)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~--~~svtED~~t~~rl~~~G 252 (526)
.|+.|+++|.+. ||.. .+.+.||+..+-.+..+|
T Consensus 248 s~~mrK~~ld~~--------------------------------------------ggi~~f~~yLaedyFaaksllSRG 283 (431)
T KOG2547|consen 248 SSMMRKEALDEC--------------------------------------------GGISAFGGYLAEDYFAAKSLLSRG 283 (431)
T ss_pred HHHHHHHHHHHh--------------------------------------------ccHHHHHHHHHHHHHHHHHHHhhh
Confidence 789999999642 3321 136899999999999999
Q ss_pred CeEEEeCCCCCceeeccCCCHHHHHHHHhhhhh
Q 009753 253 WKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSE 285 (526)
Q Consensus 253 wrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~ 285 (526)
|++.+...+ +-...+-.+...+..|-.||..
T Consensus 284 ~ksaist~p--alQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 284 WKSAISTHP--ALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred hhhhhcccc--hhhhhhhhHHHHHHHHHHHhhh
Confidence 999998764 3346666788888888888864
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=97.73 E-value=0.00012 Score=71.93 Aligned_cols=73 Identities=15% Similarity=0.136 Sum_probs=58.6
Q ss_pred ceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHH
Q 009753 39 SIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREAL 118 (526)
Q Consensus 39 ~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v 118 (526)
.+|.|+||+|+|.+.+... .+++.++.. + ..+++.+.|.|++. +.+|+|+++|+|..+ +|+.+.++.
T Consensus 27 ~eiivvD~gStD~t~~i~~--~~~~~v~~~-~-----~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~-~~~~~~~l~ 93 (229)
T cd02511 27 DEIIVVDSGSTDRTVEIAK--EYGAKVYQR-W-----WDGFGAQRNFALEL----ATNDWVLSLDADERL-TPELADEIL 93 (229)
T ss_pred CEEEEEeCCCCccHHHHHH--HcCCEEEEC-C-----CCChHHHHHHHHHh----CCCCEEEEEeCCcCc-CHHHHHHHH
Confidence 3799999999988655443 123566665 3 26799999999998 889999999999999 799999999
Q ss_pred HHhhcc
Q 009753 119 CFLLDE 124 (526)
Q Consensus 119 ~~f~d~ 124 (526)
..+.++
T Consensus 94 ~~~~~~ 99 (229)
T cd02511 94 ALLATD 99 (229)
T ss_pred HHHhCC
Confidence 888753
No 72
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=97.39 E-value=0.0018 Score=61.34 Aligned_cols=131 Identities=12% Similarity=0.085 Sum_probs=83.2
Q ss_pred CceEEEEeCCCChH---HHHHhc--cCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHH
Q 009753 38 QSIVQIIVDGRDTN---AVDKEG--CQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGD 112 (526)
Q Consensus 38 ~~~v~VldD~~~~~---~~~~~~--~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~ 112 (526)
+.+|.|+||+|-|. .++.++ -..+++....|.+. -+=+-|--+++.+ +.|+|+++.|||--- +|.
T Consensus 35 ~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~k-----lGLgtAy~hgl~~----a~g~fiviMDaDlsH-hPk 104 (238)
T KOG2978|consen 35 KYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKK-----LGLGTAYIHGLKH----ATGDFIVIMDADLSH-HPK 104 (238)
T ss_pred ceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCc-----ccchHHHHhhhhh----ccCCeEEEEeCccCC-Cch
Confidence 56799999999776 334433 24778999999874 5667788899999 999999999999987 799
Q ss_pred HHHHHHHHhhcccCCCcEEEEecCcccccCCccccchh--hHHHHH---HHHHHHHhhcCCeeeeccceeEehhhhcC
Q 009753 113 AIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN--SYLVVN---QVELAGIGSYDAALYCGTGCFHRRESLSG 185 (526)
Q Consensus 113 ~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--~~~~f~---~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (526)
++-+.+.-..+ .+.++|-+-. |.+.. ..++- ...+.- ....+-.-+.+..-.+|+--++|++.|.-
T Consensus 105 ~ipe~i~lq~~----~~~div~GTR-Ya~~g--gV~gW~mkRk~IS~gAn~la~~ll~~~~sdltGsFrLykk~vl~~ 175 (238)
T KOG2978|consen 105 FIPEFIRLQKE----GNYDIVLGTR-YAGGG--GVYGWDMKRKIISRGANFLARILLNPGVSDLTGSFRLYKKEVLEK 175 (238)
T ss_pred hHHHHHHHhhc----cCcceeeeee-EcCCC--ceecchhhHHHHhhhhHHHHHHhccCCCccCcceeeeehHHHHHh
Confidence 99887665543 2556665432 22110 11110 000000 01111122234444688989999999853
No 73
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=96.96 E-value=0.0028 Score=57.22 Aligned_cols=74 Identities=19% Similarity=0.248 Sum_probs=52.4
Q ss_pred cccCCCCc-eEEEEeCCCChHHHH---HhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC
Q 009753 32 VTKQDHQS-IVQIIVDGRDTNAVD---KEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY 107 (526)
Q Consensus 32 ~~~~~~~~-~v~VldD~~~~~~~~---~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~ 107 (526)
...|.++. +|.|+||+++|++.+ ......+.+.+...++ ..+++.|+|.++.. +.+|+++.+|+|..
T Consensus 25 ~~~q~~~~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~----~~~~~~~~~d~d~~ 95 (291)
T COG0463 25 LLNQTYKDFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINER-----NGGLGAARNAGLEY----ARGDYIVFLDADDQ 95 (291)
T ss_pred HHhhhhcceEEEEEeCCCCCChHHHHHHHhhhcceEEEeeccc-----CCChHHHHHhhHHh----ccCCEEEEEccCCC
Confidence 33555654 799999999988433 3332223455544444 37899999999998 77899999999999
Q ss_pred CCcHHHHH
Q 009753 108 ANDGDAIR 115 (526)
Q Consensus 108 ~~~p~~L~ 115 (526)
..+....
T Consensus 96 -~~~~~~~ 102 (291)
T COG0463 96 -HPPELIP 102 (291)
T ss_pred -CCHHHHH
Confidence 6555444
No 74
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=96.21 E-value=0.038 Score=57.81 Aligned_cols=126 Identities=13% Similarity=0.138 Sum_probs=74.7
Q ss_pred CceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCC----Cc-----HH----HHHHHHHHccccCCCcEEEEeCC
Q 009753 38 QSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHN----FK-----AG----AMNALIRVSSVISNGPVILNLDC 104 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~----~K-----AG----aLN~~l~~~~~~s~~~~i~ilDa 104 (526)
|..|+|.+||++++..+......-.+.++.-++....+.+ .+ |. |+|.++.. .++++++++|.
T Consensus 31 ~~~liIs~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hyk~aln~vF~~----~~~~~vIILED 106 (334)
T cd02514 31 KFPIIVSQDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHYKWALTQTFNL----FGYSFVIILED 106 (334)
T ss_pred CceEEEEeCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHHHHHHHHHHHHHHHh----cCCCEEEEECC
Confidence 5679999999988754443211112555543321100111 00 23 78888876 68999999999
Q ss_pred CCCCCcHHHH---HHHHHHhhcccCCCcEEEEecCcccccCCccccchhh-HHHHHHHHHHHHhhcCCeeeeccceeEeh
Q 009753 105 DMYANDGDAI---REALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS-YLVVNQVELAGIGSYDAALYCGTGCFHRR 180 (526)
Q Consensus 105 D~~~~~p~~L---~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR 180 (526)
|.++ .|||+ .++++.+.+ ++.+..|-+- |.+........ ...+ ....+++|.|-+.+|
T Consensus 107 Dl~~-sPdFf~yf~~~l~~y~~---D~~v~~ISa~----NdnG~~~~~~~~~~~l----------yrs~ff~glGWml~r 168 (334)
T cd02514 107 DLDI-APDFFSYFQATLPLLEE---DPSLWCISAW----NDNGKEHFVDDTPSLL----------YRTDFFPGLGWMLTR 168 (334)
T ss_pred CCcc-CHhHHHHHHHHHHHHhc---CCCEEEEEee----ccCCcccccCCCcceE----------EEecCCCchHHHHHH
Confidence 9999 79955 777777763 3489988652 21110010000 1111 123467888988888
Q ss_pred hhhcC
Q 009753 181 ESLSG 185 (526)
Q Consensus 181 ~aL~~ 185 (526)
++..+
T Consensus 169 ~~W~e 173 (334)
T cd02514 169 KLWKE 173 (334)
T ss_pred HHHHH
Confidence 88864
No 75
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=95.59 E-value=0.53 Score=54.21 Aligned_cols=188 Identities=15% Similarity=0.125 Sum_probs=110.4
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCC--CCCCCcHHHHHHHHHHhhccc--------------CCCcEEEEecCcccc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDC--DMYANDGDAIREALCFLLDEK--------------REHEIAFVQHPQRFD 140 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDa--D~~~~~p~~L~~~v~~f~d~~--------------~~~~va~VQ~pq~f~ 140 (526)
.||.-|-|+|+=. +.||++=.+|+ |++..+-==+|.++.-|.+.. ....++.|-++.+..
T Consensus 274 eGK~eNQNhaiiF----~rGe~lQ~IDmNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IF 349 (817)
T PF02364_consen 274 EGKPENQNHAIIF----TRGEYLQTIDMNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIF 349 (817)
T ss_pred CCCccccceeEEE----EccccccccccchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEe
Confidence 5899999999987 99999999998 555521111233344454321 134677777777665
Q ss_pred cCCcc---ccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhh--cCCCCCccccccccccCCCCcChHHHHHhhch
Q 009753 141 NICKN---DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESL--SGAKYPKDYRNINEAKNNDNRSVDELEKASKV 215 (526)
Q Consensus 141 n~~~~---d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 215 (526)
..+-. |-.+.+...|=...|+.+...++-+.-|.==++.|--. .|+. + .|
T Consensus 350 s~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rlHYGHPD~~n~~f~~TRGGv----------S-------------KA-- 404 (817)
T PF02364_consen 350 SENVGSLGDFAAGQEQSFGTLFQRTLANPLVRLHYGHPDVFNRIFMTTRGGV----------S-------------KA-- 404 (817)
T ss_pred cCCcchHHHHhhhhhHHHHHHHHHHHhcchhhccCCCchhhhhhheeccCcc----------c-------------hH--
Confidence 43322 22333444454556666655554455555444544433 1110 0 00
Q ss_pred hccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCCCCceeeccCC-CHHHHHHHHhhhhhhhHHHHHhh
Q 009753 216 LASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPV-TLDIALVQMKRWSEGMFQIFLSK 294 (526)
Q Consensus 216 v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~-~l~~~~~Qr~RWa~G~lqi~~~~ 294 (526)
.-| =.+.||+..|+...+||-|+.+|+-. .+|-.-+ .+.+-..=-.+=+.|+-+..+++
T Consensus 405 --------------sk~---lhLsEDIfaG~n~~lRGG~i~h~ey~---qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSR 464 (817)
T PF02364_consen 405 --------------SKG---LHLSEDIFAGMNATLRGGRIKHCEYI---QCGKGRDVGFNSILNFETKIASGMGEQMLSR 464 (817)
T ss_pred --------------hhc---ccccHHHHHHHHHHhcCCceeehhhh---hcccccccCchhhhhhHhHhcCCccchhhhH
Confidence 011 27999999999999999999998642 2454433 44444444556678888777765
Q ss_pred ccccccccCCcchhhhhhhhh
Q 009753 295 YCPFIYGHGKIKFGAQMGYCN 315 (526)
Q Consensus 295 ~~p~~~~~~~l~~~qrl~y~~ 315 (526)
--=.+ ..+|.+-+-+.+..
T Consensus 465 e~yrL--g~~ld~~R~LSfyy 483 (817)
T PF02364_consen 465 EYYRL--GTRLDFFRFLSFYY 483 (817)
T ss_pred HHHHh--hccCCHHHHHHHHh
Confidence 21112 25667666665544
No 76
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=93.48 E-value=0.2 Score=42.11 Aligned_cols=65 Identities=20% Similarity=0.150 Sum_probs=42.3
Q ss_pred ceEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCC
Q 009753 39 SIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYA 108 (526)
Q Consensus 39 ~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~ 108 (526)
..++|+||+++|.+.+.+. ++|.+..+...... .....+...+|...+. ..+++.++.+|||-+.
T Consensus 20 d~i~i~d~~s~D~t~~~l~-~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~---~~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 20 DHIYIYDDGSTDGTREILR-ALPGVGIIRWVDPY-RDERRQRAWRNALIER---AFDADWVLFLDADEFL 84 (97)
T ss_pred CEEEEEECCCCccHHHHHH-hCCCcEEEEeCCCc-cchHHHHHHHHHHHHh---CCCCCEEEEEeeeEEE
Confidence 3589999999988655543 35667766665431 1122334455555543 2578999999999877
No 77
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=93.17 E-value=0.37 Score=48.87 Aligned_cols=77 Identities=21% Similarity=0.138 Sum_probs=57.0
Q ss_pred CCceEEEEeCCCChHHHHH---hc--cCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC--CC
Q 009753 37 HQSIVQIIVDGRDTNAVDK---EG--CQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY--AN 109 (526)
Q Consensus 37 ~~~~v~VldD~~~~~~~~~---~~--~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~--~~ 109 (526)
.-.+|.|+||||.|++.+. .. .+..++.++.-.+| .+|+||...++-+ +.|+++++.|||-- ..
T Consensus 103 F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~n-----rgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~ 173 (323)
T KOG2977|consen 103 FTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKN-----RGKGGAVRKGMLS----SRGQKILFADADGATKFA 173 (323)
T ss_pred CceeEEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhcc-----CCCCcceehhhHh----ccCceEEEEcCCCCccCC
Confidence 3457999999999984332 11 23456788877765 6899999999988 89999999999952 33
Q ss_pred cHHHHHHHHHHhh
Q 009753 110 DGDAIREALCFLL 122 (526)
Q Consensus 110 ~p~~L~~~v~~f~ 122 (526)
|-+.|.+++.--.
T Consensus 174 d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 174 DLEKLEKALNDKA 186 (323)
T ss_pred CHHHHHHHHHhhc
Confidence 6777888775444
No 78
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=92.31 E-value=0.26 Score=48.47 Aligned_cols=158 Identities=16% Similarity=0.154 Sum_probs=86.3
Q ss_pred CCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcc
Q 009753 59 QLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQR 138 (526)
Q Consensus 59 ~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~ 138 (526)
.+..-+||...... ..--||..||.|...+....+.++++.-|.|++| ..+.+... | + +.|..
T Consensus 32 ~~~~~i~vi~Q~~~--~~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP-~~~~~~y~-~---~----------~~p~H 94 (219)
T cd00899 32 QLDYRIFVIEQVGN--FRFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLP-ENDRNLYG-C---E----------EGPRH 94 (219)
T ss_pred CCcEEEEEEEecCC--ccchhhhhhhHHHHHHhhcCCccEEEEecccccc-cCcccccc-C---C----------CCCeE
Confidence 34434454443221 2466999999987764322457999999999999 45544321 1 1 12222
Q ss_pred cccCCccccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhcc
Q 009753 139 FDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLAS 218 (526)
Q Consensus 139 f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~ 218 (526)
+.-.- +.+ ....-| .-+.|.+..++|+.+..+.
T Consensus 95 ~s~~~--~~~--~~~lpy------------~~~~Gg~~~~~k~~f~~VN------------------------------- 127 (219)
T cd00899 95 LSVPL--DKF--HYKLPY------------KTYFGGVLALTREQFRKVN------------------------------- 127 (219)
T ss_pred EEEee--ccc--ccccCc------------ccccccceeeEHHHHHHhC-------------------------------
Confidence 21100 000 000000 1245667889999885431
Q ss_pred ccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCCCCCce----------eeccCCCHHHHHHHHhhhhhhhH
Q 009753 219 CSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAF----------LGVAPVTLDIALVQMKRWSEGMF 288 (526)
Q Consensus 219 c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~----------~g~aP~~l~~~~~Qr~RWa~G~l 288 (526)
.|. +..| ||- .||-|++.||...|.+....+....-. ....|.-+.....++.||+...+
T Consensus 128 -Gf~-n~f~----GWG----gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGL 197 (219)
T cd00899 128 -GFS-NAYW----GWG----GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGL 197 (219)
T ss_pred -CcC-CcCc----cCC----cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCc
Confidence 011 1122 343 399999999999999876554321100 12244456666777888877776
Q ss_pred HH
Q 009753 289 QI 290 (526)
Q Consensus 289 qi 290 (526)
.-
T Consensus 198 ns 199 (219)
T cd00899 198 NS 199 (219)
T ss_pred cc
Confidence 43
No 79
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=88.15 E-value=0.86 Score=44.74 Aligned_cols=58 Identities=14% Similarity=0.194 Sum_probs=42.7
Q ss_pred EEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHh-hcccCCCcEEEE
Q 009753 63 LVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFL-LDEKREHEIAFV 133 (526)
Q Consensus 63 v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f-~d~~~~~~va~V 133 (526)
+..+++++ ...-|-+.|.|++. ++++|++.+.-|..+.+++++.+++..| .|| ++|.+
T Consensus 31 i~i~~~~~-----~~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~----~~G~i 89 (217)
T PF13712_consen 31 IEIDNVRN-----AKSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDP----NIGMI 89 (217)
T ss_dssp EEEE-SSS------S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-T----TEEEE
T ss_pred EEEeccCC-----CcCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCC----CccEE
Confidence 44555554 35678899999998 9999999999999998899999999999 666 56555
No 80
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=82.68 E-value=12 Score=37.97 Aligned_cols=108 Identities=15% Similarity=0.118 Sum_probs=61.8
Q ss_pred CCCCceEEEEeCCCC-hHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHH
Q 009753 35 QDHQSIVQIIVDGRD-TNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDA 113 (526)
Q Consensus 35 ~~~~~~v~VldD~~~-~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~ 113 (526)
.++-..|.+++.++. |......=..+|++.|+.=......... +---|+|...|-...+.++++.+|+|++.. .|-
T Consensus 35 s~~~~~vi~~~~~~~~d~~i~~~i~~~~~~~yl~~~s~~~F~s~--~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dn 111 (346)
T COG4092 35 SSDITMVICLRAHEVMDRLIRSYIDPMPRVLYLDFGSPEPFASE--TICANNGADYSHEKCESNLVLFLDVDCFGS-SDN 111 (346)
T ss_pred ccccEEEEEEecchhHHHHHHHHhccccceEEEecCCCccccch--hhhhhccchhhhccccccEEEEEecccccc-HHH
Confidence 344455666665543 2222233346899999987653222112 444566666644446799999999999994 555
Q ss_pred HHHHHHHhhcccCCCcE-EEEecCcccccCCcc
Q 009753 114 IREALCFLLDEKREHEI-AFVQHPQRFDNICKN 145 (526)
Q Consensus 114 L~~~v~~f~d~~~~~~v-a~VQ~pq~f~n~~~~ 145 (526)
..+.+..-.-.+....+ |+.--|..+.|...+
T Consensus 112 F~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~~ 144 (346)
T COG4092 112 FAKMLSIATIKKMRTNIDAPLVLPVYHLNKADT 144 (346)
T ss_pred HHHHHHHHHHHHHHhccCcceeeeeeecchhhh
Confidence 55555332211122245 666678888776433
No 81
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=80.63 E-value=1.4 Score=49.36 Aligned_cols=175 Identities=15% Similarity=0.103 Sum_probs=106.1
Q ss_pred eEEEEeCCCChHH----HHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHH
Q 009753 40 IVQIIVDGRDTNA----VDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIR 115 (526)
Q Consensus 40 ~v~VldD~~~~~~----~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~ 115 (526)
+|.++||.++.+. .|+.-++++.+.+++.++| .|+-.|.+.+-+. +.||.++.+||-+-+ +..+|.
T Consensus 176 EIiLVdD~S~~~~l~~~Ld~y~k~~~~v~i~r~~~R-----~GLIrARl~GA~~----A~geVL~FLDsHcE~-n~gWLe 245 (578)
T KOG3736|consen 176 EIILVDDFSDRDHLKDKLEEYVKRFSKVRILRTKKR-----EGLIRARLLGASM----ATGEVLTFLDSHCEV-NVGWLE 245 (578)
T ss_pred EEEEeecCcchhhhhhhhHHHHhhhcceeEEeecch-----hhhHHHHhhhhhh----hhchheeeeecceeE-ecCcch
Confidence 5778899998652 3333334555777777776 5788888888887 899999999999999 589999
Q ss_pred HHHHHhh-cccCCCcEEEEecCcccccCCccc-cchh---------hHHHHHH-------HHHH-H--HhhcCCeeeecc
Q 009753 116 EALCFLL-DEKREHEIAFVQHPQRFDNICKND-LYAN---------SYLVVNQ-------VELA-G--IGSYDAALYCGT 174 (526)
Q Consensus 116 ~~v~~f~-d~~~~~~va~VQ~pq~f~n~~~~d-~~~~---------~~~~f~~-------~~~~-g--~d~~~~~~~~Gt 174 (526)
-++.--. |+. ..| +|. ...++.++ .|.. ...+.|. ...+ . .+-+..|...|.
T Consensus 246 PLL~~I~~~r~-----tvv-~Pv-ID~Id~~tf~y~~~~~~~rGgFdW~l~f~w~~lP~~~~~~~~~~t~PirsPtMaGg 318 (578)
T KOG3736|consen 246 PLLARIAEDRK-----TVV-CPV-IDVIDDNTFEYEKQSELMRGGFDWELTFKWERLPLPEEKRRELPTDPIRSPTMAGG 318 (578)
T ss_pred HHHHHhhhcCc-----eee-cce-EEeecCcCceecccCccceeeeecceeEEeccCCccHhhcccCCCCCcCCcccCCc
Confidence 8887654 331 111 221 12222111 0100 0011111 1111 1 133456778888
Q ss_pred ceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCcc---chHHHHHHHHhC
Q 009753 175 GCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAA---EDVVTGLTIQCR 251 (526)
Q Consensus 175 g~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svt---ED~~t~~rl~~~ 251 (526)
-+.+.|+-+.++ |+|+.+.=. |-+++|+|+-.-
T Consensus 319 lFAI~r~yF~ei--------------------------------------------G~yD~gMdiwGGENlElSfrvWqC 354 (578)
T KOG3736|consen 319 LFAIDRKYFGEL--------------------------------------------GSYDEGMDIWGGENLELSFRVWQC 354 (578)
T ss_pred eEEeeHHHHhhc--------------------------------------------cCccccccccChhhceeeEEEecc
Confidence 888999888643 556665433 899999999777
Q ss_pred CCeEEEeCCCC--CceeeccCCCHHH
Q 009753 252 GWKSMYFKPNK--PAFLGVAPVTLDI 275 (526)
Q Consensus 252 Gwrs~y~~~~~--~~~~g~aP~~l~~ 275 (526)
|=+..-+|-.+ -.|+...|-+..+
T Consensus 355 GG~lei~PCSrVGHifRk~~pY~~p~ 380 (578)
T KOG3736|consen 355 GGRLEIVPCSRVGHIFRKRKPYTFPD 380 (578)
T ss_pred CCeEEecCccceeeeeecCCCccCCC
Confidence 77766555332 2344556666644
No 82
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=78.96 E-value=2 Score=35.28 Aligned_cols=31 Identities=16% Similarity=-0.078 Sum_probs=18.6
Q ss_pred cCCCCCCc---cchHHHHHHHHhCCCeEEEeCCC
Q 009753 231 MGLVYGCA---AEDVVTGLTIQCRGWKSMYFKPN 261 (526)
Q Consensus 231 gG~~~~sv---tED~~t~~rl~~~Gwrs~y~~~~ 261 (526)
+||++.-. -||.|++.|+...|.+....+..
T Consensus 35 nGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~ 68 (78)
T PF02709_consen 35 NGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGS 68 (78)
T ss_dssp TSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTT
T ss_pred CCCCccccccCccHHHHHHHHHHcCCeEEecCCc
Confidence 45544322 39999999999999998775543
No 83
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=75.38 E-value=20 Score=38.30 Aligned_cols=41 Identities=10% Similarity=0.035 Sum_probs=31.4
Q ss_pred cHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhc
Q 009753 79 KAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLD 123 (526)
Q Consensus 79 KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d 123 (526)
....+-+|++. -+.|++++.|||+-.-+++.+++++..+.+
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~~ 123 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALDK 123 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhhc
Confidence 46678888887 345999999999744369999998877653
No 84
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=72.45 E-value=1.5e+02 Score=36.78 Aligned_cols=170 Identities=15% Similarity=0.069 Sum_probs=94.2
Q ss_pred CCCcHHHHHHHHHHccccCCCcEEEEeCC--CCCCCcHHHHHHHHHHhhccc-CCCcEEEEecCcccccCCcc---ccch
Q 009753 76 HNFKAGAMNALIRVSSVISNGPVILNLDC--DMYANDGDAIREALCFLLDEK-REHEIAFVQHPQRFDNICKN---DLYA 149 (526)
Q Consensus 76 ~~~KAGaLN~~l~~~~~~s~~~~i~ilDa--D~~~~~p~~L~~~v~~f~d~~-~~~~va~VQ~pq~f~n~~~~---d~~~ 149 (526)
..||..|-|+|+-. ++||++=.+|+ |++..+-==+|.++.-|...+ ....++.+-...+....+-+ |-..
T Consensus 1049 GeGKpeNQNhaiiF----tRGE~iQtIDmNQDnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~svssLa~fms 1124 (1679)
T KOG0916|consen 1049 GEGKPENQNHAIIF----TRGEAIQTIDMNQDNYLEEALKMRNLLQEFEELHLGIRPPTILGAREHIFTGSVSSLAWFMS 1124 (1679)
T ss_pred CCCCCcccCceeee----ecchhhheecccchHHHHHHHHHHHHHHHHHhhcCCCCCCceeeehhheecCCchHHHHHHc
Confidence 36899999999988 99999999998 666621111334444454322 23356666655554433221 2223
Q ss_pred hhHHHHHHHHHHHHhhcCC-eeeeccceeEehhhh--cCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCc
Q 009753 150 NSYLVVNQVELAGIGSYDA-ALYCGTGCFHRRESL--SGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTH 226 (526)
Q Consensus 150 ~~~~~f~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~ 226 (526)
++...|-..-|+-+...++ -+.-|.=-++.|-.. .|+. + .|
T Consensus 1125 ~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~drif~~TRGGv----------S-------------KA------------- 1168 (1679)
T KOG0916|consen 1125 GQEQSFVTLGQRTLANPGGVRLHYGHPDVFDRIFHITRGGV----------S-------------KA------------- 1168 (1679)
T ss_pred cCccchhhHHHHHhccccceeeecCCCcHhhhhhhhccccc----------h-------------Hh-------------
Confidence 3434444455666655555 355566556665322 2220 0 00
Q ss_pred cccccCCCCCCccchHHHHHHHHhCCCeEEEeCCCCCceeeccCC-CHHHHHHHHhhhhhhhHHHHHhh
Q 009753 227 WGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPV-TLDIALVQMKRWSEGMFQIFLSK 294 (526)
Q Consensus 227 wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~-~l~~~~~Qr~RWa~G~lqi~~~~ 294 (526)
.-| -.+.||+..|+.-..||-++.+|+-- ..|-.-+ .+.+-..=-.+=+.|+=|-.+++
T Consensus 1169 ---sk~---inlsEDIfAG~n~tlRgG~itH~EYi---QvGKGRDvGlnqI~~FeaKia~G~GEQ~LSR 1228 (1679)
T KOG0916|consen 1169 ---SKG---INLSEDIFAGFNATLRGGNITHHEYI---QVGKGRDVGLNQISNFEAKIANGNGEQTLSR 1228 (1679)
T ss_pred ---hcc---cccchHhhhhhhHHhhCCCcccceee---ecccccccCcchhhhhhhhhcCCCcchhhhH
Confidence 012 27999999999999999999888621 1222111 12222222233467777666654
No 85
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=70.91 E-value=13 Score=37.42 Aligned_cols=27 Identities=22% Similarity=0.218 Sum_probs=22.0
Q ss_pred CCCcEEEEeCCCCCCCcHHHHHHHHHHh
Q 009753 94 SNGPVILNLDCDMYANDGDAIREALCFL 121 (526)
Q Consensus 94 s~~~~i~ilDaD~~~~~p~~L~~~v~~f 121 (526)
++.+..+.+|-|+++ +.+-|++.+.-+
T Consensus 85 ~~~~Wf~~~DDDtyv-~~~~L~~~L~~~ 111 (252)
T PF02434_consen 85 SDKDWFCFADDDTYV-NVENLRRLLSKY 111 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS
T ss_pred CCceEEEEEeCCcee-cHHHHHHHHhhC
Confidence 578999999999999 688888887766
No 86
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=70.26 E-value=6.1 Score=41.14 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=32.1
Q ss_pred HHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEE
Q 009753 84 NALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFV 133 (526)
Q Consensus 84 N~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~V 133 (526)
|.|++. +..++++++|+|++| .+++-+....+........+.++|
T Consensus 120 NvAr~~----a~T~~v~~~DvD~~p-s~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 120 NVARSG----ARTDYVFLLDVDFLP-SPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHh----cCcceEEEecceeee-CcchHHHHHHHhhhhccCCceEEE
Confidence 445554 789999999999999 588777766665433234567776
No 87
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=68.11 E-value=3.7 Score=43.47 Aligned_cols=69 Identities=20% Similarity=0.239 Sum_probs=41.6
Q ss_pred ceEEEEeCCCChH-HH---HHhccCCCcEEEEEccCCCCCCCCCcHHHHHH---HHHHccccCCCcEEEEeCCCCCCCcH
Q 009753 39 SIVQIIVDGRDTN-AV---DKEGCQLPTLVYMAREKRPGCPHNFKAGAMNA---LIRVSSVISNGPVILNLDCDMYANDG 111 (526)
Q Consensus 39 ~~v~VldD~~~~~-~~---~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~---~l~~~~~~s~~~~i~ilDaD~~~~~p 111 (526)
..|.++||-|+.+ +. |+.-..+..++-|-|.++ .-|-+|+ +.++ +.|+.++.+||-+-+ +-
T Consensus 188 ~eivlvDDfSdKehLkekLDeYv~~fnGlVkV~Rne~-------REGLI~aRSiGA~~----atGeV~ifLDAHCEV-nt 255 (603)
T KOG3737|consen 188 AEIVLVDDFSDKEHLKEKLDEYVKLFNGLVKVFRNER-------REGLIQARSIGAQK----ATGEVLIFLDAHCEV-NT 255 (603)
T ss_pred heEEEeccCCccHHHHHHHHHHHHHhcCEEEEEecch-------hhhhhhhhccchhh----ccccEEEEEecceee-ec
Confidence 3455677777644 33 332233445666666554 1222332 2233 789999999999999 57
Q ss_pred HHHHHHHH
Q 009753 112 DAIREALC 119 (526)
Q Consensus 112 ~~L~~~v~ 119 (526)
++|--++.
T Consensus 256 NWlpPLlA 263 (603)
T KOG3737|consen 256 NWLPPLLA 263 (603)
T ss_pred cccccccc
Confidence 88876653
No 88
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=58.50 E-value=1e+02 Score=29.38 Aligned_cols=54 Identities=11% Similarity=0.076 Sum_probs=40.0
Q ss_pred cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 62 TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 62 ~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+.++.++. ..+.++++-+++.... .+.+.+++++||+ .. +++.+.+++..+.+
T Consensus 63 ~~~~~~~~~-----~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~-~~~~i~~l~~~~~~ 117 (229)
T cd02540 63 NVEFVLQEE-----QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLI-TPETLQRLLEAHRE 117 (229)
T ss_pred CcEEEECCC-----CCCCHHHHHHHHHhhc--cCCCeEEEEeCCcccc-CHHHHHHHHHHHHh
Confidence 466776544 2578999999998732 1368899999999 45 57889888887754
No 89
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=58.23 E-value=59 Score=30.07 Aligned_cols=54 Identities=11% Similarity=0.034 Sum_probs=38.1
Q ss_pred cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 62 TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 62 ~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+.++.+++. ..+-++++-.|++. ..+.+.+++++||+ .. +++.+++++..+.+
T Consensus 63 ~v~~v~~~~~----~~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 117 (188)
T TIGR03310 63 NITLVHNPQY----AEGQSSSIKLGLEL---PVQSDGYLFLLGDQPFV-TPDIIQLLLEAFAL 117 (188)
T ss_pred CeEEEECcCh----hcCHHHHHHHHhcC---CCCCCEEEEEeCCcCCC-CHHHHHHHHHHHHh
Confidence 3666665432 23556778888872 14678999999999 45 68999998887653
No 90
>PLN03153 hypothetical protein; Provisional
Probab=55.61 E-value=54 Score=36.45 Aligned_cols=30 Identities=20% Similarity=0.127 Sum_probs=24.3
Q ss_pred cCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcc
Q 009753 93 ISNGPVILNLDCDMYANDGDAIREALCFLLDE 124 (526)
Q Consensus 93 ~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~ 124 (526)
..+.+.++++|.|++.. ++-|.+.+.-+ |+
T Consensus 208 ~pd~kWfVf~DDDTyf~-~~NLv~~Ls~Y-Dp 237 (537)
T PLN03153 208 LPDVRWFVLGDDDTIFN-ADNLVAVLSKY-DP 237 (537)
T ss_pred CCCCCEEEEecCCcccc-HHHHHHHHhhc-CC
Confidence 36889999999999994 77777777666 55
No 91
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=55.04 E-value=79 Score=28.92 Aligned_cols=43 Identities=12% Similarity=0.142 Sum_probs=34.4
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhh
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLL 122 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~ 122 (526)
.+-+.++..|++... .+.|.+++++||+ .+ +++.+++++..+.
T Consensus 74 ~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~ 117 (186)
T cd04182 74 EGMSSSLAAGLEALP--ADADAVLILLADQPLV-TAETLRALIDAFR 117 (186)
T ss_pred hCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCC-CHHHHHHHHHHHH
Confidence 567888999998732 1478999999999 56 6899999888775
No 92
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=46.82 E-value=1.2e+02 Score=28.48 Aligned_cols=42 Identities=24% Similarity=0.207 Sum_probs=31.8
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDE 124 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~ 124 (526)
.+-++++-.++.. -+.+.+++++||++. +.+ +.+.+.++.+.
T Consensus 81 ~g~~~al~~~~~~----~~~~~~lv~~~D~~~-~~~-~~~~~~~~~~~ 122 (217)
T cd04181 81 LGTAGAVRNAEDF----LGDDDFLVVNGDVLT-DLD-LSELLRFHREK 122 (217)
T ss_pred CccHHHHHHhhhh----cCCCCEEEEECCeec-CcC-HHHHHHHHHhc
Confidence 5678999999987 356789999999998 567 45566666543
No 93
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=45.37 E-value=47 Score=31.48 Aligned_cols=58 Identities=14% Similarity=0.132 Sum_probs=35.2
Q ss_pred CCCcEEEEEccCCCCCCCCCcH-HHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHh
Q 009753 59 QLPTLVYMAREKRPGCPHNFKA-GAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFL 121 (526)
Q Consensus 59 ~~p~v~yv~R~~~p~~~~~~KA-GaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f 121 (526)
++-.+....-++.- .+...|. .+++.+.++. .+.+|++-.|-|+++ +++-|.+.+.-.
T Consensus 47 ~y~Dil~~d~~D~y-~nlt~K~~~~~~w~~~~c---~~~~~v~k~DDD~~v-n~~~l~~~L~~~ 105 (195)
T PF01762_consen 47 KYGDILQGDFVDSY-RNLTLKTLAGLKWASKHC---PNAKYVLKVDDDVFV-NPDRLVSFLKSL 105 (195)
T ss_pred hcCceEeeeccccc-chhhHHHHHHHHHHHhhC---CchhheeecCcEEEE-ehHHhhhhhhhc
Confidence 34445555544431 0122232 5677777762 458999999999999 677666654433
No 94
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=43.99 E-value=1.7e+02 Score=27.50 Aligned_cols=73 Identities=19% Similarity=0.117 Sum_probs=43.2
Q ss_pred eEEEEeCCCChHHHHHhccCC--C-cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHH
Q 009753 40 IVQIIVDGRDTNAVDKEGCQL--P-TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIRE 116 (526)
Q Consensus 40 ~v~VldD~~~~~~~~~~~~~~--p-~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~ 116 (526)
.|.|+-+...+.+.+..+... . .+.+ .++.. ..+-++++-.+++. .+.+.+++++||++. +++ +.+
T Consensus 46 ~v~vv~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~----~~G~~~~l~~a~~~----~~~~~~lv~~~D~~~-~~~-~~~ 114 (223)
T cd06915 46 RIVLSVGYLAEQIEEYFGDGYRGGIRIYY-VIEPE----PLGTGGAIKNALPK----LPEDQFLVLNGDTYF-DVD-LLA 114 (223)
T ss_pred EEEEEcccCHHHHHHHHcCccccCceEEE-EECCC----CCcchHHHHHHHhh----cCCCCEEEEECCccc-CCC-HHH
Confidence 455555444444444443211 1 2333 33332 35778889888887 345678999999987 456 556
Q ss_pred HHHHhhc
Q 009753 117 ALCFLLD 123 (526)
Q Consensus 117 ~v~~f~d 123 (526)
.+..+..
T Consensus 115 ~l~~~~~ 121 (223)
T cd06915 115 LLAALRA 121 (223)
T ss_pred HHHHHHh
Confidence 6766653
No 95
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=39.55 E-value=2.8e+02 Score=25.33 Aligned_cols=42 Identities=19% Similarity=0.180 Sum_probs=34.4
Q ss_pred CCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHh
Q 009753 76 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFL 121 (526)
Q Consensus 76 ~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f 121 (526)
..+-.+++..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 35678899999997 5689999999999433699999988776
No 96
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=37.93 E-value=2.1e+02 Score=30.59 Aligned_cols=73 Identities=7% Similarity=0.028 Sum_probs=45.6
Q ss_pred eEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHH
Q 009753 40 IVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREAL 118 (526)
Q Consensus 40 ~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v 118 (526)
.+.|+-....+.+.+..+. . .+.++.+++ ..+-++++-.++... .+.|.++++++|+ +. +++.+++++
T Consensus 45 ~iiiv~~~~~~~i~~~~~~-~-~i~~~~~~~-----~~G~~~ai~~a~~~l---~~~~~~lv~~~D~p~i-~~~~~~~l~ 113 (451)
T TIGR01173 45 KIHVVYGHGAEQVRKALAN-R-DVNWVLQAE-----QLGTGHAVLQALPFL---PDDGDVLVLYGDVPLI-SAETLERLL 113 (451)
T ss_pred eEEEEECCCHHHHHHHhcC-C-CcEEEEcCC-----CCchHHHHHHHHHhc---CCCCcEEEEECCcCCc-CHHHHHHHH
Confidence 3444433333334444442 2 366654432 246788898888873 3447899999999 56 588899988
Q ss_pred HHhhc
Q 009753 119 CFLLD 123 (526)
Q Consensus 119 ~~f~d 123 (526)
..+.+
T Consensus 114 ~~~~~ 118 (451)
T TIGR01173 114 EAHRQ 118 (451)
T ss_pred HHHhh
Confidence 87754
No 97
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=37.61 E-value=63 Score=34.73 Aligned_cols=73 Identities=10% Similarity=0.020 Sum_probs=48.5
Q ss_pred ceEEEEeCCCChH-HHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHH
Q 009753 39 SIVQIIVDGRDTN-AVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREA 117 (526)
Q Consensus 39 ~~v~VldD~~~~~-~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~ 117 (526)
.+|.++||+|.|. .++.+. +.|+++.++..+|. |=--.-|.+-. .+.+.++..+|.-+-+ |.++|+-+
T Consensus 157 ~EiILVDD~S~Dped~~~L~-ri~kvr~LRN~~Re-----GLirSRvrGAd----vA~a~vltFLDSHcEv-N~~WLePL 225 (559)
T KOG3738|consen 157 HEIILVDDFSQDPEDGKLLK-RIPKVRVLRNNERE-----GLIRSRVRGAD----VAQATVLTFLDSHCEV-NEGWLEPL 225 (559)
T ss_pred heeEEecCCCCChHHHHHHh-hhheeeeecccchh-----hhhhhhccccc----cccceEEEEEecceee-cchhhHHH
Confidence 4677889988754 444443 67888886554442 21112222222 3789999999999999 58999988
Q ss_pred HHHhh
Q 009753 118 LCFLL 122 (526)
Q Consensus 118 v~~f~ 122 (526)
+....
T Consensus 226 L~Rva 230 (559)
T KOG3738|consen 226 LERVA 230 (559)
T ss_pred HHHHh
Confidence 87764
No 98
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=37.03 E-value=1.3e+02 Score=28.94 Aligned_cols=57 Identities=16% Similarity=0.224 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHhhcccCchh--HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCe
Q 009753 449 LAMLNLFSLIGGFIDIIFLDFGALG--NLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPF 507 (526)
Q Consensus 449 l~ll~l~alv~g~~r~~~~~~~~~~--~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~ 507 (526)
|+++.+++++-|+--++..+...++ ++++..+..|+.+.++|-++.-+.+ |+++.|.
T Consensus 102 Ll~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~a--d~sqr~~ 160 (226)
T COG4858 102 LLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRA--DNSQRPG 160 (226)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhc--ccccCCc
Confidence 5567788888888777763333233 4566667778888888877766644 6665654
No 99
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=35.34 E-value=90 Score=28.90 Aligned_cols=42 Identities=17% Similarity=0.181 Sum_probs=34.8
Q ss_pred CCCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhh
Q 009753 76 HNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLL 122 (526)
Q Consensus 76 ~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~ 122 (526)
..+-.+++-.|++. .+.+.+++++||+ .+ +++.+++++..+.
T Consensus 72 ~~g~~~si~~al~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~ 114 (186)
T TIGR02665 72 FPGPLAGILAGLRW----AGTDWVLTVPCDTPFL-PEDLVARLAAALE 114 (186)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEecCCCcC-CHHHHHHHHHHhh
Confidence 35778889889987 4568999999999 66 6999999988775
No 100
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=35.02 E-value=86 Score=29.41 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=33.8
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+-.+++..+++. .+.+.+++++||+ .+ +++.+++++..+.+
T Consensus 74 ~g~~~~i~~~l~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 116 (193)
T PRK00317 74 PGPLAGILAGLKQ----ARTEWVLVVPCDTPFI-PPDLVARLAQAAGK 116 (193)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEcCCcCCC-CHHHHHHHHHhhhc
Confidence 3556788888886 5679999999999 55 79999998887653
No 101
>KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism]
Probab=34.76 E-value=3.5e+02 Score=29.00 Aligned_cols=143 Identities=15% Similarity=0.160 Sum_probs=79.4
Q ss_pred hccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEec
Q 009753 56 EGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQH 135 (526)
Q Consensus 56 ~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~ 135 (526)
....++.+..+.-.. ....|.||-.+-+.. .+--++..+|.|.+. -.+||.++ .. +..-|++|-|
T Consensus 282 lra~f~~~q~l~lng-----eFSRa~aL~vGAe~~---~~nvLLFfcDVDi~F-T~efL~rc--r~-Nt~~gkqiyf--- 346 (494)
T KOG3588|consen 282 LRASFIPVQFLGLNG-----EFSRAKALMVGAETL---NANVLLFFCDVDIYF-TTEFLNRC--RL-NTILGKQIYF--- 346 (494)
T ss_pred HhhcCCceEEecccc-----hhhhhHHHHhhHHHh---ccceeEEEeccceee-hHHHHHHH--hh-ccCCCceEEE---
Confidence 344567776665432 356788898888872 234467788999999 58999884 32 2223444442
Q ss_pred CcccccCCccccc------hhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhc-CCCCCccccccccccCCCCcChHH
Q 009753 136 PQRFDNICKNDLY------ANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLS-GAKYPKDYRNINEAKNNDNRSVDE 208 (526)
Q Consensus 136 pq~f~n~~~~d~~------~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~-~~~~~~~~~~~~~~~~~~~~~~~~ 208 (526)
|.-|.--++.-.| +.++.. ...+..|+--.+--|-.|.+|-+.+. |+ +.
T Consensus 347 PivFS~ynp~ivy~~~~~~p~e~~~----~~~~~tGfwRdfGfGmtc~yrsd~~~vgG-FD------------------- 402 (494)
T KOG3588|consen 347 PIVFSQYNPEIVYEQDKPLPAEQQL----VIKKDTGFWRDFGFGMTCQYRSDFLTVGG-FD------------------- 402 (494)
T ss_pred EEEEeecCcceeecCCCCCchhHhe----eeccccccccccCCceeEEeeccceeecC-cc-------------------
Confidence 3333322222222 222211 11121222223345777888888773 21 00
Q ss_pred HHHhhchhccccccccCccccccCCCCCCccchHHHHHHHHhCCCeEEEeCC
Q 009753 209 LEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKP 260 (526)
Q Consensus 209 ~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~t~~rl~~~Gwrs~y~~~ 260 (526)
+ ++.||- .||+++=-+-...|-+++-.++
T Consensus 403 -------------~------~I~GWG----~EDV~Ly~K~v~~~l~viR~p~ 431 (494)
T KOG3588|consen 403 -------------M------EIKGWG----GEDVDLYRKYVHSGLKVIRTPE 431 (494)
T ss_pred -------------e------eeeccC----cchHHHHHHHHhcCcEEEecCC
Confidence 0 023443 4899999888888888876665
No 102
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=33.63 E-value=1.3e+02 Score=33.31 Aligned_cols=55 Identities=11% Similarity=0.202 Sum_probs=42.2
Q ss_pred HhccCCC--cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHH
Q 009753 55 KEGCQLP--TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREA 117 (526)
Q Consensus 55 ~~~~~~p--~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~ 117 (526)
+...++| ++.++..... ...++.+|+.+++. ..+.++++.+|-|+.. .++||.++
T Consensus 306 ~l~~k~~~~~i~~i~~~~~----~fsr~~~Ld~g~~~---~~~d~L~f~~Dvd~~f-~~~fL~rc 362 (499)
T PF05679_consen 306 ELERKYPFSRIKWISVKTG----EFSRGAALDVGAKK---FPPDSLLFFCDVDMVF-TSDFLNRC 362 (499)
T ss_pred HHHHhCCccceEEEEecCC----CccHHHHHHhhccc---CCCCcEEEEEeCCccc-CHHHHHHH
Confidence 3334444 6778887732 36799999999996 3567899999999999 69999985
No 103
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate []. The isoprenoid pathway is a well known target for anti-infective drug development [, ].; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process; PDB: 1VGW_F 1VGZ_A 1W77_A 2YC3_A 2YCM_A 2YC5_A 1VGU_A 3N9W_B 1I52_A 1H3M_B ....
Probab=31.91 E-value=1.8e+02 Score=28.57 Aligned_cols=72 Identities=7% Similarity=0.053 Sum_probs=42.1
Q ss_pred eEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHH
Q 009753 40 IVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREAL 118 (526)
Q Consensus 40 ~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v 118 (526)
+|.|+.++..+...+.... ..+.++.-- .......-+||+... .+.++|++-||=- .+ .++.+.+++
T Consensus 47 Ivvv~~~~~~~~~~~~~~~--~~v~iv~GG-------~tR~~SV~ngL~~l~--~~~d~VlIHDaaRPfv-~~~~i~~~i 114 (221)
T PF01128_consen 47 IVVVVPPEDIDYVEELLSK--KKVKIVEGG-------ATRQESVYNGLKALA--EDCDIVLIHDAARPFV-SPELIDRVI 114 (221)
T ss_dssp EEEEESGGGHHHHHHHHHH--TTEEEEE---------SSHHHHHHHHHHCHH--CTSSEEEEEETTSTT---HHHHHHHH
T ss_pred EEEEecchhHHHHHHhhcC--CCEEEecCC-------hhHHHHHHHHHHHHH--cCCCEEEEEccccCCC-CHHHHHHHH
Confidence 4555555443433222222 446665422 235566777787643 4459999999954 44 589999999
Q ss_pred HHhhc
Q 009753 119 CFLLD 123 (526)
Q Consensus 119 ~~f~d 123 (526)
....+
T Consensus 115 ~~~~~ 119 (221)
T PF01128_consen 115 EAARE 119 (221)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88764
No 104
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=31.54 E-value=1.5e+02 Score=29.80 Aligned_cols=42 Identities=10% Similarity=-0.005 Sum_probs=29.7
Q ss_pred cHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhh
Q 009753 79 KAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL 122 (526)
Q Consensus 79 KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~ 122 (526)
..+.+-+|++... .+.++|++.|+|+=.-.++.+.+++....
T Consensus 103 r~~SV~~gl~~l~--~~~~~VlihDaarP~vs~~~i~~li~~~~ 144 (252)
T PLN02728 103 RQDSVFNGLQEVD--ANSELVCIHDSARPLVTSADIEKVLKDAA 144 (252)
T ss_pred hHHHHHHHHHhcc--CCCCEEEEecCcCCCCCHHHHHHHHHHHh
Confidence 3566777777632 35689999999764446888888876554
No 105
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=31.22 E-value=2.5e+02 Score=26.69 Aligned_cols=43 Identities=21% Similarity=0.103 Sum_probs=33.7
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLD 123 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d 123 (526)
.+=..++-.|++. .+.+.+++++||+-.-.++.+++++....+
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 120 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLEN 120 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhhc
Confidence 3555678888886 456899999999976679999988877643
No 106
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=30.29 E-value=3.9e+02 Score=23.73 Aligned_cols=65 Identities=14% Similarity=0.153 Sum_probs=45.0
Q ss_pred EEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhcccCCCcEEEEecCc
Q 009753 63 LVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLDEKREHEIAFVQHPQ 137 (526)
Q Consensus 63 v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq 137 (526)
+.++.-+.. ..+=+.+|=.|++.. .+.+.++++-||+ .+ +++.+++++..+.+ .+..++++.++.
T Consensus 60 ~~~v~~~~~----~~G~~~sl~~a~~~~---~~~~~vlv~~~D~p~~-~~~~l~~l~~~~~~--~~~~i~~~~~~~ 125 (160)
T PF12804_consen 60 IKVVVDPEP----GQGPLASLLAALSQL---PSSEPVLVLPCDQPFL-SPELLRRLLEALEK--SPADIVVPVFRG 125 (160)
T ss_dssp SEEEE-STS----SCSHHHHHHHHHHTS---TTSSEEEEEETTETTS--HHHHHHHHHHHHH--TTTSEEEEEETT
T ss_pred ceEEEeccc----cCChHHHHHHHHHhc---ccCCCcEEEeCCcccc-CHHHHHHHHHHHhc--cCCcEEEEEECC
Confidence 555544321 356778888888871 2889999999999 45 69999999988863 234677776543
No 107
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=29.93 E-value=61 Score=34.37 Aligned_cols=44 Identities=16% Similarity=0.095 Sum_probs=32.6
Q ss_pred CCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhh
Q 009753 76 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL 122 (526)
Q Consensus 76 ~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~ 122 (526)
+.||+-.|=-++-.+. +...+||..+|||.++ |.++.+-+.-|.
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~yA 185 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIYA 185 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHHH
Confidence 5788888777655421 2477999999999999 688888765543
No 108
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=29.67 E-value=63 Score=34.09 Aligned_cols=44 Identities=16% Similarity=0.084 Sum_probs=32.6
Q ss_pred CCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhh
Q 009753 76 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL 122 (526)
Q Consensus 76 ~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~ 122 (526)
+.||+-.|=-++-... +...+||..+|||.++ |.++.+-+.-|.
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~yA 184 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIYA 184 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHHH
Confidence 5788888877665422 2477999999999999 678887665443
No 109
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=29.05 E-value=1.9e+02 Score=29.13 Aligned_cols=54 Identities=20% Similarity=0.147 Sum_probs=33.9
Q ss_pred CCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHH
Q 009753 60 LPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREAL 118 (526)
Q Consensus 60 ~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v 118 (526)
.+.+.++.-+. ..+-|+|+-.++.......+.+.++++.+||+..+.+-+.+++
T Consensus 72 ~~~~~ii~ep~-----~~gTa~ai~~a~~~~~~~~~~~~vlVl~~D~~i~~~~~f~~~l 125 (274)
T cd02509 72 LPEENIILEPE-----GRNTAPAIALAALYLAKRDPDAVLLVLPSDHLIEDVEAFLKAV 125 (274)
T ss_pred CCCceEEECCC-----CCCcHHHHHHHHHHHHhcCCCCeEEEecchhcccCHHHHHHHH
Confidence 35566665322 2467888888777632112357999999999985444444444
No 110
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=28.73 E-value=2.5e+02 Score=30.12 Aligned_cols=43 Identities=16% Similarity=-0.063 Sum_probs=31.7
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhh
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLL 122 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~ 122 (526)
.+-++++-.+++... .+.|.+++++||+ +. +++.+++++.++.
T Consensus 82 ~G~~~sl~~a~~~l~--~~~~~~lv~~~D~P~i-~~~~l~~l~~~~~ 125 (446)
T PRK14353 82 LGTAHAVLAAREALA--GGYGDVLVLYGDTPLI-TAETLARLRERLA 125 (446)
T ss_pred CCcHHHHHHHHHHHh--ccCCCEEEEeCCcccC-CHHHHHHHHHhHh
Confidence 467888888887631 1346678899999 67 6899999887654
No 111
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=28.65 E-value=1.1e+02 Score=32.56 Aligned_cols=55 Identities=20% Similarity=0.441 Sum_probs=33.3
Q ss_pred CcEEEEEccCCCCCCC-------CCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHH
Q 009753 61 PTLVYMAREKRPGCPH-------NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREA 117 (526)
Q Consensus 61 p~v~yv~R~~~p~~~~-------~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~ 117 (526)
+.++|+.-+..|.... ...-.+|+..++..+ +..+|+|++-|.|-+| +|+.|+.+
T Consensus 138 ~KIiy~~l~~~~~~g~~~~w~~E~~qR~~l~~l~~~~~-~~~dDliivSDvDEIP-~p~~l~~L 199 (356)
T PF04724_consen 138 DKIIYVTLDDPPEKGRKDPWDRENYQRNALNGLLRLAG-IQDDDLIIVSDVDEIP-SPETLKFL 199 (356)
T ss_pred cceEEEEecCcCCCCCCchhHHHHHHHHHHHHHhhhcC-CCCCCEEEEcCccccc-CHHHHHHH
Confidence 4677776655432111 112234544444322 4678999999999999 68877654
No 112
>KOG4440 consensus NMDA selective glutamate-gated ion channel receptor subunit GRIN1 [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=26.69 E-value=1.6e+02 Score=33.50 Aligned_cols=79 Identities=9% Similarity=0.135 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 009753 386 MLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDII 465 (526)
Q Consensus 386 ~w~i~~~~~~~~~~~~~~~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~ 465 (526)
+|....++.++-|+.--++..+.|- ..|++.-.+.+++. .+|+.+.+|..|..+
T Consensus 572 LW~lv~~SVhvVal~lYlLDrfSPF-gRFk~~ds~~~ee~-------------------------alnlssAmWF~WGVL 625 (993)
T KOG4440|consen 572 LWLLVGLSVHVVALMLYLLDRFSPF-GRFKVNDSEEEEED-------------------------ALNLSSAMWFSWGVL 625 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcc-cceeeccCccchhh-------------------------hcchhhhHHHHhHhh
Confidence 5556566666655443344433332 35777654433321 133334444444444
Q ss_pred h------cccCchhHHHHHHHHHHHHHHHHH
Q 009753 466 F------LDFGALGNLMCQIILCGLMVLVNV 490 (526)
Q Consensus 466 ~------~~~~~~~~~~~~l~~~~~~v~~~~ 490 (526)
. +...+++.-+++++|+||.+++..
T Consensus 626 LNSGigEgtPRSfSARvLGmVWaGFaMIiVA 656 (993)
T KOG4440|consen 626 LNSGIGEGTPRSFSARVLGMVWAGFAMIIVA 656 (993)
T ss_pred hccccCCCCCcchhHHHHHHHHhhhheeeeh
Confidence 3 222346777999999999876543
No 113
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=26.45 E-value=3.9e+02 Score=25.34 Aligned_cols=40 Identities=18% Similarity=0.202 Sum_probs=29.4
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhh
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL 122 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~ 122 (526)
-+-++++..+++. .+.+.++++.||++. +.++.+ .+.++.
T Consensus 82 ~g~~~~l~~~~~~----~~~~~~lv~~~D~i~-~~~~~~-~~~~~~ 121 (221)
T cd06422 82 LETGGGIKKALPL----LGDEPFLVVNGDILW-DGDLAP-LLLLHA 121 (221)
T ss_pred cccHHHHHHHHHh----cCCCCEEEEeCCeee-CCCHHH-HHHHHH
Confidence 4578999999987 333678899999998 677555 454443
No 114
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=26.08 E-value=1e+02 Score=32.72 Aligned_cols=43 Identities=21% Similarity=0.102 Sum_probs=28.2
Q ss_pred CCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHh
Q 009753 76 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFL 121 (526)
Q Consensus 76 ~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f 121 (526)
++||+-.|=-++-.+. +...+||..+|||.+. |.++.+-+.-|
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~y 183 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDY 183 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHH
Confidence 5789888877765432 2567999999999998 78888766433
No 115
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=25.47 E-value=1.9e+02 Score=27.99 Aligned_cols=77 Identities=14% Similarity=0.221 Sum_probs=49.4
Q ss_pred EEEEeCCCChHHHHHhccC--CC-cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHH
Q 009753 41 VQIIVDGRDTNAVDKEGCQ--LP-TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREA 117 (526)
Q Consensus 41 v~VldD~~~~~~~~~~~~~--~p-~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~ 117 (526)
|.|+-....+.+.+..+.. +. .+.|+.-+.. .+-|+|+-.+........+.+.++++.+|++. +. -+.++
T Consensus 50 i~V~~~~~~~~i~~~~~~~~~~~~~i~~i~~~~~-----~Gta~al~~a~~~i~~~~~~~~~lv~~gD~i~-~~-~~~~~ 122 (248)
T PF00483_consen 50 IVVVNGYKEEQIEEHLGSGYKFGVKIEYIVQPEP-----LGTAGALLQALDFIEEEDDDEDFLVLNGDIIF-DD-DLQDM 122 (248)
T ss_dssp EEEEETTTHHHHHHHHTTSGGGTEEEEEEEESSS-----SCHHHHHHHTHHHHTTSEE-SEEEEETTEEEE-ST-THHHH
T ss_pred EEEEeecccccccccccccccccccceeeecccc-----cchhHHHHHHHHHhhhccccceEEEEeccccc-cc-hhhhH
Confidence 6666655555444444432 22 4777765542 48899999999984311113469999999999 55 56788
Q ss_pred HHHhhcc
Q 009753 118 LCFLLDE 124 (526)
Q Consensus 118 v~~f~d~ 124 (526)
+.++.+.
T Consensus 123 l~~~~~~ 129 (248)
T PF00483_consen 123 LEFHRES 129 (248)
T ss_dssp HHHHHHH
T ss_pred HHhhhcc
Confidence 8887754
No 116
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=24.89 E-value=4.6e+02 Score=28.09 Aligned_cols=52 Identities=13% Similarity=0.040 Sum_probs=37.5
Q ss_pred EEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 63 LVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 63 v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
+.++.+++ ..+-++++-.+++.. .+.+.++++++|+ .. +++.+++++.++.+
T Consensus 64 ~~~~~~~~-----~~g~~~ai~~a~~~l---~~~~~vlv~~gD~p~i-~~~~i~~l~~~~~~ 116 (448)
T PRK14357 64 VKIFLQEE-----QLGTAHAVMCARDFI---EPGDDLLILYGDVPLI-SENTLKRLIEEHNR 116 (448)
T ss_pred cEEEecCC-----CCChHHHHHHHHHhc---CcCCeEEEEeCCcccC-CHHHHHHHHHHHHh
Confidence 45554443 246799999999873 2357899999998 45 46778888887754
No 117
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=24.77 E-value=5.7e+02 Score=27.60 Aligned_cols=54 Identities=11% Similarity=0.068 Sum_probs=38.7
Q ss_pred cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 62 TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 62 ~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+.|+..+. ..+-++++..+++... .+.+.++++++|+ +. .++.+++++.++..
T Consensus 69 ~i~~~~~~~-----~~Gt~~al~~a~~~l~--~~~~~vlv~~gD~p~~-~~~~i~~l~~~~~~ 123 (459)
T PRK14355 69 DVSFALQEE-----QLGTGHAVACAAPALD--GFSGTVLILCGDVPLL-RAETLQGMLAAHRA 123 (459)
T ss_pred ceEEEecCC-----CCCHHHHHHHHHHHhh--ccCCcEEEEECCccCc-CHHHHHHHHHHHHh
Confidence 466765433 2467899999988731 1257899999999 55 57888998887754
No 118
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=23.67 E-value=3e+02 Score=26.32 Aligned_cols=68 Identities=9% Similarity=0.054 Sum_probs=40.9
Q ss_pred eEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHH
Q 009753 40 IVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREA 117 (526)
Q Consensus 40 ~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~ 117 (526)
.|.|+-....+.+.+..+. .+++.++.-+. ....+-++++..++.. . .+.++++.+|++. +++.++..
T Consensus 46 ~i~vv~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~g~~~s~~~~~~~----~-~~~~lv~~~D~~~-~~~~~~~~ 113 (229)
T cd02523 46 DIVIVTGYKKEQIEELLKK-YPNIKFVYNPD---YAETNNIYSLYLARDF----L-DEDFLLLEGDVVF-DPSILERL 113 (229)
T ss_pred eEEEEeccCHHHHHHHHhc-cCCeEEEeCcc---hhhhCcHHHHHHHHHH----c-CCCEEEEeCCEec-CHHHHHHH
Confidence 3444443334434333332 14566664332 1235678999999887 3 4678889999998 68766654
No 119
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=23.20 E-value=5.9e+02 Score=25.27 Aligned_cols=76 Identities=14% Similarity=0.079 Sum_probs=47.7
Q ss_pred eEEEEeCCCChH-H---HHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEe--CCCCCCCcHHH
Q 009753 40 IVQIIVDGRDTN-A---VDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNL--DCDMYANDGDA 113 (526)
Q Consensus 40 ~v~VldD~~~~~-~---~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~il--DaD~~~~~p~~ 113 (526)
...|+-|...|+ . .+.+-..+|+++.+.++.. ....++..+++... ...+++++.+ |.|--+ +.||
T Consensus 60 ~~lv~~~~~~P~~~~~rL~~l~~~~p~~~i~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~RLDdDDAl-~~dF 131 (234)
T PF11316_consen 60 TWLVLFDDDLPEPYRERLRDLLADYPQFRIVFRPPG------PHRDAMRRAINAAR-RDGADPVLQFRLDDDDAL-HRDF 131 (234)
T ss_pred EEEEEECCCCCHHHHHHHHHHhccCCCcEEEecCCc------hHHHHHHHHHhhhc-cCCCCEEEEEEECCcchh-hHHH
Confidence 444444444443 2 2233346888888887653 35567777774421 1345655554 999999 7999
Q ss_pred HHHHHHHhhc
Q 009753 114 IREALCFLLD 123 (526)
Q Consensus 114 L~~~v~~f~d 123 (526)
++++-.+..+
T Consensus 132 V~rlr~~a~~ 141 (234)
T PF11316_consen 132 VARLRRAAAD 141 (234)
T ss_pred HHHHHHHHHh
Confidence 9999888753
No 120
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=22.23 E-value=7.2e+02 Score=24.06 Aligned_cols=59 Identities=8% Similarity=-0.024 Sum_probs=42.2
Q ss_pred CCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEe
Q 009753 76 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQ 134 (526)
Q Consensus 76 ~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ 134 (526)
.-+...++.++++......+.|.+++++||+=.-+++.+++++..|.+.+.+.-+..+.
T Consensus 75 ~~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~ 133 (222)
T TIGR03584 75 FTGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTS 133 (222)
T ss_pred CCCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeec
Confidence 45677888888886321134799999999998878999999999887532333444444
No 121
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=20.68 E-value=7.5e+02 Score=26.46 Aligned_cols=44 Identities=9% Similarity=0.024 Sum_probs=33.3
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+-++++-.+++... ...+.++++++|+ +. +++.+++++.++.+
T Consensus 76 ~g~~~al~~a~~~l~--~~~d~vlv~~~D~p~i-~~~~l~~li~~~~~ 120 (458)
T PRK14354 76 LGTGHAVMQAEEFLA--DKEGTTLVICGDTPLI-TAETLKNLIDFHEE 120 (458)
T ss_pred CCHHHHHHHHHHHhc--ccCCeEEEEECCcccc-CHHHHHHHHHHHHh
Confidence 467889988888731 1247899999998 56 68889998887754
No 122
>PHA02688 ORF059 IMV protein VP55; Provisional
Probab=20.24 E-value=1.6e+02 Score=30.63 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=37.7
Q ss_pred CCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCC
Q 009753 95 NGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNIC 143 (526)
Q Consensus 95 ~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~ 143 (526)
..+||+|++-|+.++++..++.++.-|.+. ++-++|-...+.|.+
T Consensus 116 ~~~yivVlEDDnTi~~~~~~~~~I~~M~~n----~idilQLre~~~~~~ 160 (323)
T PHA02688 116 EDEYIVVVEDDNTLRDITTLHPIIKAMKEK----NIDILQLRETLHNNN 160 (323)
T ss_pred CCCeEEEEcCCCcccccHHHHHHHHHHHhc----CeEEEEeehhhhCCc
Confidence 468999999999999889999988888754 799999876666643
Done!