Query 009753
Match_columns 526
No_of_seqs 284 out of 1760
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 12:14:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009753.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009753hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 4.4E-43 1.5E-47 400.7 38.0 394 32-507 163-584 (802)
2 3bcv_A Putative glycosyltransf 99.5 1.4E-13 4.9E-18 132.5 12.8 164 34-261 29-220 (240)
3 2z86_A Chondroitin synthase; G 99.5 1.4E-13 4.7E-18 152.4 12.7 179 38-274 123-336 (625)
4 1xhb_A Polypeptide N-acetylgal 99.5 2.4E-13 8.1E-18 145.5 12.7 207 33-298 53-300 (472)
5 1qg8_A Protein (spore coat pol 99.4 5.9E-14 2E-18 136.7 5.6 189 33-286 24-235 (255)
6 2ffu_A Ppgalnact-2, polypeptid 99.4 5.4E-13 1.9E-17 144.1 11.8 219 34-313 91-353 (501)
7 2d7i_A Polypeptide N-acetylgal 99.4 2.6E-13 9E-18 149.3 6.8 206 34-298 137-378 (570)
8 2z86_A Chondroitin synthase; G 99.3 1.6E-12 5.5E-17 143.8 9.9 193 32-291 397-598 (625)
9 4fix_A UDP-galactofuranosyl tr 99.1 1.8E-10 6.2E-15 128.7 9.1 190 38-283 212-438 (657)
10 3ckj_A Putative uncharacterize 99.0 8.1E-10 2.8E-14 112.9 11.4 92 32-136 70-169 (329)
11 3l7i_A Teichoic acid biosynthe 99.0 6.9E-11 2.4E-15 133.5 0.0 167 32-260 24-199 (729)
12 2fy7_A Beta-1,4-galactosyltran 98.8 2.9E-09 1E-13 107.3 5.2 136 77-291 111-263 (287)
13 3f1y_A Mannosyl-3-phosphoglyce 98.6 5.1E-07 1.7E-11 94.6 13.8 85 38-135 126-216 (387)
14 2nxv_A ATP synthase subunits r 98.5 8.2E-07 2.8E-11 86.9 11.7 53 77-134 60-113 (249)
15 2bo4_A Mannosylglycerate synth 98.1 1.5E-05 5.1E-10 83.7 12.1 78 39-122 29-119 (397)
16 2zu9_A Mannosyl-3-phosphoglyce 95.8 0.0096 3.3E-07 62.0 6.2 38 76-119 142-182 (394)
17 2wvl_A Mannosyl-3-phosphoglyce 94.8 0.08 2.7E-06 54.3 8.9 84 34-120 75-182 (391)
18 1fo8_A Alpha-1,3-mannosyl-glyc 94.0 0.15 5E-06 52.2 8.8 91 37-135 31-138 (343)
19 2c0n_A A197; thermophil protei 75.6 15 0.00053 34.3 9.7 24 94-118 52-78 (203)
20 3lw6_A FI08434P, beta-4-galact 75.2 7.1 0.00024 38.6 7.7 153 59-291 81-250 (287)
21 2j0a_A Beta-1,3-N-acetylglucos 52.9 32 0.0011 33.6 7.6 30 94-125 92-121 (280)
22 3q80_A 2-C-methyl-D-erythritol 50.8 34 0.0012 32.2 7.3 45 79-123 83-127 (231)
23 3d5n_A Q97W15_sulso; NESG, SSR 47.8 36 0.0012 30.7 6.8 40 78-121 72-112 (197)
24 2wee_A MOBA-related protein; u 46.5 47 0.0016 29.4 7.2 41 77-120 79-120 (197)
25 3juk_A UDP-glucose pyrophospho 40.4 73 0.0025 30.3 8.0 43 77-124 106-152 (281)
26 2y6p_A 3-deoxy-manno-octuloson 40.4 67 0.0023 29.4 7.5 41 77-123 72-113 (234)
27 3tqd_A 3-deoxy-manno-octuloson 40.3 1.1E+02 0.0036 29.2 9.1 44 77-123 81-125 (256)
28 3k8d_A 3-deoxy-manno-octuloson 39.2 1.3E+02 0.0043 28.9 9.4 46 77-124 90-135 (264)
29 1ezi_A CMP-N-acetylneuraminic 36.0 80 0.0027 28.8 7.2 45 77-123 80-124 (228)
30 2waw_A MOBA relate protein; un 35.7 1.1E+02 0.0036 26.9 7.8 42 77-120 79-120 (199)
31 2yc3_A 2-C-methyl-D-erythritol 35.1 1.2E+02 0.0041 27.5 8.3 44 77-123 81-125 (228)
32 4fce_A Bifunctional protein GL 34.4 85 0.0029 32.0 7.8 53 62-123 73-126 (459)
33 2xwl_A 2-C-methyl-D-erythritol 33.0 82 0.0028 28.4 6.7 40 78-121 78-118 (223)
34 3oam_A 3-deoxy-manno-octuloson 31.0 1.8E+02 0.0063 27.1 9.0 44 77-123 74-118 (252)
35 1qwj_A Cytidine monophospho-N- 28.9 1.6E+02 0.0056 26.8 8.1 41 80-123 82-122 (229)
36 3rsb_A Adenosylcobinamide-phos 27.0 26 0.00088 31.4 2.0 40 78-123 79-119 (196)
37 4fcu_A 3-deoxy-manno-octuloson 25.5 1.5E+02 0.0051 28.1 7.3 53 81-136 77-130 (253)
38 1e5k_A Molybdopterin-guanine d 24.0 74 0.0025 28.8 4.6 39 77-120 77-116 (201)
39 2v0h_A Bifunctional protein GL 22.8 1.7E+02 0.006 29.5 7.7 43 77-123 80-123 (456)
40 2vsh_A TARI, 2-C-methyl-D-eryt 21.7 1.1E+02 0.0036 27.9 5.2 45 78-123 85-133 (236)
41 2qh5_A PMI, ALGA, mannose-6-ph 21.7 2.9E+02 0.0099 26.6 8.7 74 39-120 52-128 (308)
42 2ux8_A Glucose-1-phosphate uri 20.4 1.8E+02 0.006 27.8 6.7 52 62-123 107-160 (297)
43 2e8b_A Probable molybdopterin- 20.3 3E+02 0.01 24.5 8.0 38 77-118 82-120 (201)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=4.4e-43 Score=400.71 Aligned_cols=394 Identities=20% Similarity=0.288 Sum_probs=304.7
Q ss_pred cccCCCCc---eEEEEeCCCChHHHHH---------------hc--cCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHcc
Q 009753 32 VTKQDHQS---IVQIIVDGRDTNAVDK---------------EG--CQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSS 91 (526)
Q Consensus 32 ~~~~~~~~---~v~VldD~~~~~~~~~---------------~~--~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~ 91 (526)
...++||. +|.|+|||++|++.+. .. .+..++.|+.|+++ +++|++|+|.+++.
T Consensus 163 l~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~~~~~----~~GKa~alN~gl~~-- 236 (802)
T 4hg6_A 163 AKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTRERN----EHAKAGNMSAALER-- 236 (802)
T ss_dssp HHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEECSSC----CSHHHHHHHHHHHH--
T ss_pred HHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEEecCC----CCcchHHHHHHHHh--
Confidence 34688885 7999999998765210 00 01234899999886 58999999999999
Q ss_pred ccCCCcEEEEeCCCCCCCcHHHHHHHHHHhh-cccCCCcEEEEecCcccccCCcc-------ccchhhHHHHHHHHHHHH
Q 009753 92 VISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKN-------DLYANSYLVVNQVELAGI 163 (526)
Q Consensus 92 ~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~-d~~~~~~va~VQ~pq~f~n~~~~-------d~~~~~~~~f~~~~~~g~ 163 (526)
+++|||+++|||+++ +||+|++++.+|. || ++++||+++.+.|.++. ..+.++...++...+.+.
T Consensus 237 --a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~dp----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (802)
T 4hg6_A 237 --LKGELVVVFDADHVP-SRDFLARTVGYFVEDP----DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGL 309 (802)
T ss_dssp --CCCSEEEECCTTEEE-CTTHHHHHHHHHHHSS----SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHH
T ss_pred --cCCCEEEEECCCCCc-ChHHHHHHHHHHhcCC----CeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhH
Confidence 899999999999999 7999999999995 55 79999999999886521 223456678899999999
Q ss_pred hhcCCeeeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCccchHH
Q 009753 164 GSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVV 243 (526)
Q Consensus 164 d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~svtED~~ 243 (526)
+.+++++++|+++++||+++++ .|||++++++||.+
T Consensus 310 ~~~~~~~~~G~~~~~Rr~al~~--------------------------------------------vGgf~~~~~~ED~~ 345 (802)
T 4hg6_A 310 DRWGGAFFCGSAAVLRRRALDE--------------------------------------------AGGFAGETITEDAE 345 (802)
T ss_dssp HHTTCCCCCSSSEEEEHHHHHH--------------------------------------------HTTCCCSSSSHHHH
T ss_pred hhcCCceecccchhhhHHHHHH--------------------------------------------cCCcCCCCcchHHH
Confidence 9999999999999999999975 28999999999999
Q ss_pred HHHHHHhCCCeEEEeCCCCCceeeccCCCHHHHHHHHhhhhhhhHHHHHhhccccccccCCcchhhhhhhhhhhhhhhhH
Q 009753 244 TGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLS 323 (526)
Q Consensus 244 t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~ 323 (526)
++.+++++|||+.|+++. .+++++|+|++++++||.||++|.+|+++.+ +|++ .+++++.||++|+....+++.+
T Consensus 346 l~~rl~~~G~ri~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~~-~pl~--~~~l~~~~rl~~l~~~~~~~~~ 420 (802)
T 4hg6_A 346 TALEIHSRGWKSLYIDRA--MIAGLQPETFASFIQQRGRWATGMMQMLLLK-NPLF--RRGLGIAQRLCYLNSMSFWFFP 420 (802)
T ss_dssp HHHHHHTTTCCEEECCCC--CEEECCCCSHHHHHHHHHHHHHHHHHHHHHS-CTTS--CSSCCHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHcCCeEEEecCC--EEEecCCCCHHHHHHHHHHHHccHHHHHHHh-Cccc--cCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999874 6789999999999999999999999999875 7876 5789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccccchhhHHHHHHHHHHHHHHHHH
Q 009753 324 LPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCI 403 (526)
Q Consensus 324 ~~~l~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~l~~~~~~~~~l~~~~~G~~~~~ww~~~~~w~i~~~~~~~~~~~~~~ 403 (526)
++.++++++|++++++|+.++......++..++..++. ..++.....|.....||.. +..+...++.+...+
T Consensus 421 ~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~---~~~~~~~~~~~~r~~~~~~-----l~~~~~~~~~~~a~l 492 (802)
T 4hg6_A 421 LVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAV---SFLVQNALFARQRWPLVSE-----VYEVAQAPYLARAIV 492 (802)
T ss_dssp HHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHH---HHHHHHHHHTTTSCTTHHH-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHH---HHHHHHHHhcCcHHHHHHH-----HHHHHHHHHHHHHHH
Confidence 99999999999999999988876433322222111111 1111111223322334432 222333344444445
Q ss_pred HHHHcCCCCCeeeCCCCCcchhhhHhhhhceeccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHH
Q 009753 404 VKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCG 483 (526)
Q Consensus 404 ~k~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~ll~l~alv~g~~r~~~~~~~~~~~~~~~l~~~~ 483 (526)
..++++++.+|+||+|+...+.. + + +++..|++++++++++++++|++++.... .......++++|+.
T Consensus 493 ~~l~~~~~~~f~VT~Kg~~~~~~--~------~---~~~~~p~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~w~~ 560 (802)
T 4hg6_A 493 TTLLRPRSARFAVTAKDETLSEN--Y------I---SPIYRPLLFTFLLCLSGVLATLVRWVAFP-GDRSVLLVVGGWAV 560 (802)
T ss_dssp HHHHSTTCCCCCCCCCCCCCSSC--C------B---CTTCHHHHHHHHHHHHHHHHHHHHHHHCG-GGHHHHHHHHHHHH
T ss_pred HHHhCCCCCcceECCCCcccccc--c------h---hhHHHHHHHHHHHHHHHHHHHHHHHhccC-CccchhhhhhHHHH
Confidence 56678899999999998764221 1 1 35678888899999999999999987632 23445678899999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCe
Q 009753 484 LMVLVNVPIYEALFIRKDKGCMPF 507 (526)
Q Consensus 484 ~~v~~~~p~~~~l~~Rk~~~~~P~ 507 (526)
++++.+.+.+....+|+++++.|.
T Consensus 561 ~~l~~l~~~~~~~~~~~~~R~~~R 584 (802)
T 4hg6_A 561 LNVLLVGFALRAVAEKQQRRAAPR 584 (802)
T ss_dssp HHHHHHHHHHTTTBCCCCSCCCCC
T ss_pred HHHHHHHHHHHHHhcCCCcccccc
Confidence 999999999999998888775554
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.49 E-value=1.4e-13 Score=132.55 Aligned_cols=164 Identities=15% Similarity=0.084 Sum_probs=107.7
Q ss_pred cCCCC-ceEEEEeCCCChHH---HHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCC
Q 009753 34 KQDHQ-SIVQIIVDGRDTNA---VDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYAN 109 (526)
Q Consensus 34 ~~~~~-~~v~VldD~~~~~~---~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~ 109 (526)
+|+++ .+|.|+||+++|++ +++...+.|++.+++. +| .++++|.|.|++. ++||||+++|+|.++
T Consensus 29 ~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~~-~n-----~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~- 97 (240)
T 3bcv_A 29 AQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHK-KN-----AGLGMACNSGLDV----ATGEYVAFCDSDDYV- 97 (240)
T ss_dssp TCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEEC-CC-----CCHHHHHHHHHHH----CCSSEEEECCTTCCC-
T ss_pred hCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEEC-CC-----CChHHHHHHHHHH----cCCCEEEEECCCCcC-
Confidence 45554 47999999998874 3334445788999864 33 6899999999999 899999999999999
Q ss_pred cHHHHHHHHHHhhcccCCCcEEEEecCcccccCCcc------------ccchhhHHHHHHHHHHHHhhcCC---------
Q 009753 110 DGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN------------DLYANSYLVVNQVELAGIGSYDA--------- 168 (526)
Q Consensus 110 ~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~------------d~~~~~~~~f~~~~~~g~d~~~~--------- 168 (526)
+|++|++++..+.++ + ..+|.+.....+.+.. ..+.. ... .+ ... ..++.
T Consensus 98 ~~~~l~~l~~~~~~~--~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~--~~~~~~~~~~~~~~ 168 (240)
T 3bcv_A 98 DSDMYMTMYNVAQKY--T--CDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNK-NEI-HT-LLK--DLIASDPYAREERA 168 (240)
T ss_dssp CTTHHHHHHHHHHHH--T--CSEEEC--------------------CEEECSH-HHH-HH-HHG--GGTSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc--C--CCEEEEeeEEEccCCccccccccccccccccCH-HHH-HH-HHH--HHhhcchhhccccc
Confidence 799999999999764 2 2333333222221110 01111 110 01 000 11111
Q ss_pred eeeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCcccccc-CCCCC--CccchHHHH
Q 009753 169 ALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM-GLVYG--CAAEDVVTG 245 (526)
Q Consensus 169 ~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~g-G~~~~--svtED~~t~ 245 (526)
...+|+++++||+++... | ||+.+ ...||.++.
T Consensus 169 ~~~~~~~~~~rr~~~~~~--------------------------------------------g~~f~~~~~~~~eD~~~~ 204 (240)
T 3bcv_A 169 IQVSAKVVLYRRNLIEKK--------------------------------------------HLRFVSERILPSEDLIFN 204 (240)
T ss_dssp HHHTCSCEEEEHHHHHHT--------------------------------------------TCCCCCTTTCTTHHHHHH
T ss_pred cccchhheeeeHHHHHHc--------------------------------------------CCccCCCCCccCCCHHHH
Confidence 113577889999999742 4 78766 467999999
Q ss_pred HHHHhCCCeEEEeCCC
Q 009753 246 LTIQCRGWKSMYFKPN 261 (526)
Q Consensus 246 ~rl~~~Gwrs~y~~~~ 261 (526)
+|+..+|+++.|+++.
T Consensus 205 ~r~~~~g~~i~~~~~~ 220 (240)
T 3bcv_A 205 VDVLANSNIVCVLPQT 220 (240)
T ss_dssp HHHHTTCSCEEECC--
T ss_pred HHHHHhCCEEEEECCC
Confidence 9999999999999874
No 3
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.47 E-value=1.4e-13 Score=152.41 Aligned_cols=179 Identities=15% Similarity=0.105 Sum_probs=120.3
Q ss_pred CceEEEEeCCCChHHHHHhc--cCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHH
Q 009753 38 QSIVQIIVDGRDTNAVDKEG--CQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIR 115 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~~--~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~ 115 (526)
+.+|.|+||+++|++.+... ...+.+.|+.++++ .++|++|+|.|++. +++|+|+++|+|+++ +|++|.
T Consensus 123 ~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~~~----~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~-~~~~l~ 193 (625)
T 2z86_A 123 DYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDY----GYQLCAVRNLGLRA----AKYNYVAILDCDMAP-NPLWVQ 193 (625)
T ss_dssp CEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEECCC----SCCHHHHHHHHHHH----CCSSEEEEECTTEEE-CTTHHH
T ss_pred CeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEeCCC----CcchhHHHHHHHHh----CCcCEEEEECCCCCC-CHHHHH
Confidence 56899999999987543332 12367999988754 35799999999999 899999999999999 799999
Q ss_pred HHHHHhhcccCCCcEEEEecCcccccCCcc-------ccchhh------HHHHHH------------HHHHHHhh---cC
Q 009753 116 EALCFLLDEKREHEIAFVQHPQRFDNICKN-------DLYANS------YLVVNQ------------VELAGIGS---YD 167 (526)
Q Consensus 116 ~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~-------d~~~~~------~~~f~~------------~~~~g~d~---~~ 167 (526)
+++..|.+ ++.+++|+..+.+.+.... ..+.+. ...+.. ......+. ..
T Consensus 194 ~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (625)
T 2z86_A 194 SYMELLAV---DDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCN 270 (625)
T ss_dssp HHHHHHHH---CTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCS
T ss_pred HHHHHHhc---CCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccC
Confidence 99999973 2367887765544332210 000000 000000 00000011 11
Q ss_pred C--eeeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCc---cchH
Q 009753 168 A--ALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCA---AEDV 242 (526)
Q Consensus 168 ~--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~sv---tED~ 242 (526)
. ..++|+++++||+++..+ |||+.... .||.
T Consensus 271 ~~~~~~~g~~~~~rr~~l~~i--------------------------------------------Ggfde~~~~~g~ED~ 306 (625)
T 2z86_A 271 TPFRFFSGGNVAFAKKWLFRA--------------------------------------------GWFDEEFTHWGGEDN 306 (625)
T ss_dssp CGGGGCCTTEEEEETHHHHHH--------------------------------------------CCCCTTCSSCCCHHH
T ss_pred CceeEEeeceeeeEHHHHHHh--------------------------------------------CCCccccccCCcchh
Confidence 1 247899999999999742 78887754 5999
Q ss_pred HHHHHHHhCCCeEEEeCCCCCceeeccCCCHH
Q 009753 243 VTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLD 274 (526)
Q Consensus 243 ~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~ 274 (526)
++++|++.+||++.|+++. .++...|.+-.
T Consensus 307 dl~~Rl~~~G~~i~~~p~~--~v~H~~~~~~~ 336 (625)
T 2z86_A 307 EFGYRLYREGCYFRSVEGA--MAYHQEPPGKE 336 (625)
T ss_dssp HHHHHHHHTTCEEEECGGG--CEEEECCC---
T ss_pred hhhhhHHhCCceEEEcccc--hhhccCCcccc
Confidence 9999999999999999874 34555665544
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.46 E-value=2.4e-13 Score=145.53 Aligned_cols=207 Identities=13% Similarity=0.039 Sum_probs=134.6
Q ss_pred ccCCCCc---eEEEEeCCCChH-H---HHHhccCCC-cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCC
Q 009753 33 TKQDHQS---IVQIIVDGRDTN-A---VDKEGCQLP-TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDC 104 (526)
Q Consensus 33 ~~~~~~~---~v~VldD~~~~~-~---~~~~~~~~p-~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDa 104 (526)
..+++|. +|.|+||+++|+ + +++...+.| +++++..++| .++++|+|.|++. +.||+|+++|+
T Consensus 53 ~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~flD~ 123 (472)
T 1xhb_A 53 INRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDA 123 (472)
T ss_dssp HHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEES
T ss_pred HhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCC-----CChHHHHHHHHHh----ccCCeEEEECC
Confidence 3456654 899999999873 3 344434678 8999998876 5799999999999 88999999999
Q ss_pred CCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCcc------c----cchh-----hHHHHHHHHHHHH-h---h
Q 009753 105 DMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN------D----LYAN-----SYLVVNQVELAGI-G---S 165 (526)
Q Consensus 105 D~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~------d----~~~~-----~~~~f~~~~~~g~-d---~ 165 (526)
|..+ +|++|++++..+.+. +.++.+.. ....+.+.. . .+.. ............. + .
T Consensus 124 D~~~-~p~~L~~ll~~~~~~---~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
T 1xhb_A 124 HCEC-TAGWLEPLLARIKHD---RRTVVCPI-IDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLP 198 (472)
T ss_dssp SEEE-CTTCHHHHHHHHHHC---TTEEEEEE-EEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSC
T ss_pred CeEe-CccHHHHHHHHHHhC---CCEEEEee-eeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCc
Confidence 9999 799999999998732 24443321 111111100 0 0000 0000000000111 1 2
Q ss_pred cCCeeeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCc---cchH
Q 009753 166 YDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCA---AEDV 242 (526)
Q Consensus 166 ~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~sv---tED~ 242 (526)
...+..+|++.++||+++..+ |||+++.. .||+
T Consensus 199 ~~~~~~~g~~~~irr~~~~~i--------------------------------------------Ggfde~~~~~g~ED~ 234 (472)
T 1xhb_A 199 VRTPTMAGGLFSIDRDYFQEI--------------------------------------------GTYDAGMDIWGGENL 234 (472)
T ss_dssp EECSBCCSSSEEEEHHHHHHT--------------------------------------------TSCCTTSCTTCCCCS
T ss_pred ccCccccceeEEEEHHHHHHc--------------------------------------------CCCCCcccccCchhH
Confidence 223456788889999999753 77887654 7999
Q ss_pred HHHHHHHhCCCeEEEeCCCCCc--eeeccCC----C-----HHHHHHHHhhhhhhhHHHHHhhcccc
Q 009753 243 VTGLTIQCRGWKSMYFKPNKPA--FLGVAPV----T-----LDIALVQMKRWSEGMFQIFLSKYCPF 298 (526)
Q Consensus 243 ~t~~rl~~~Gwrs~y~~~~~~~--~~g~aP~----~-----l~~~~~Qr~RWa~G~lqi~~~~~~p~ 298 (526)
++++|+...|+++.|++..... .....|. . .....+...||..+..+.++.+ .|.
T Consensus 235 dl~~R~~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~-~p~ 300 (472)
T 1xhb_A 235 EISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYII-SPG 300 (472)
T ss_dssp HHHHHHHHTTCEEEEEEEEEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHT-STT
T ss_pred HHHHHHHhcCCeEEEccCcEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh-Ccc
Confidence 9999999999999999763210 0111222 2 4577788889999999988764 564
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.43 E-value=5.9e-14 Score=136.72 Aligned_cols=189 Identities=10% Similarity=0.019 Sum_probs=119.8
Q ss_pred ccCCCC-ceEEEEeCCCChHHHHHhcc--CCCcEEEEEcc--------CCCCCCCCCcHHHHHHHHHHccccCCCcEEEE
Q 009753 33 TKQDHQ-SIVQIIVDGRDTNAVDKEGC--QLPTLVYMARE--------KRPGCPHNFKAGAMNALIRVSSVISNGPVILN 101 (526)
Q Consensus 33 ~~~~~~-~~v~VldD~~~~~~~~~~~~--~~p~v~yv~R~--------~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~i 101 (526)
.+|++| .+|.|+||+++|++.+.... ..+++.|+..+ ++ .++++|+|.|++. ++||||++
T Consensus 24 ~~q~~~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n-----~G~~~a~N~gi~~----a~g~~i~~ 94 (255)
T 1qg8_A 24 LSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEK-----TRYAALINQAIEM----AEGEYITY 94 (255)
T ss_dssp HTCSCCCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSS-----CHHHHHHHHHHHH----CCCSEEEE
T ss_pred HhccCCceEEEEEECCCCchHHHHHHHHhhcCCEEEEecccccccccccc-----cCHHHHHHHHHHH----cCCCEEEE
Confidence 356665 47999999999885443321 26789999987 43 6899999999999 89999999
Q ss_pred eCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccc--cCCccccchhhHHHHHHHHHHHHhhcCCeeeeccceeEe
Q 009753 102 LDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFD--NICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHR 179 (526)
Q Consensus 102 lDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~--n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~R 179 (526)
+|+|.++ +|++|.+++..+.+ .+++++|.+..... +.+.. .......... ..........+|+++++|
T Consensus 95 lD~Dd~~-~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~r 164 (255)
T 1qg8_A 95 ATDDNIY-MPDRLLKMVRELDT---HPEKAVIYSASKTYHLNENRD-IVKETVRPAA-----QVTWNAPCAIDHCSVMHR 164 (255)
T ss_dssp EETTEEE-CTTHHHHHHHHHHH---CTTCCEEEEEEEEEEEC---C-EEEEEEECCC-----SCBSCCTTTSCGGGEEEE
T ss_pred eCCCCcc-ChHHHHHHHHHHHh---CCCceEEEeceEEEEeCCCCc-chhhccCchH-----HHHHhhcCCCccceEEEE
Confidence 9999999 79999999999873 22677777766554 32211 1100000000 000122334678999999
Q ss_pred hhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCcccccc-CC------CC-CCccchHHHHHHHHhC
Q 009753 180 RESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM-GL------VY-GCAAEDVVTGLTIQCR 251 (526)
Q Consensus 180 R~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~g-G~------~~-~svtED~~t~~rl~~~ 251 (526)
|+++... | || .. ....||.++.+|+..+
T Consensus 165 r~~~~~~--------------------------------------------g~~f~~~~~~~~~~~~~eD~~~~~r~~~~ 200 (255)
T 1qg8_A 165 YSVLEKV--------------------------------------------KEKFGSYWDESPAFYRIGDARFFWRVNHF 200 (255)
T ss_dssp THHHHHH--------------------------------------------HHHHSSSSCCCGGGSTTHHHHHHHHHTTT
T ss_pred HHHHHhh--------------------------------------------cccccccccCCcccchHHHHHHHHHHHHh
Confidence 9999642 3 44 22 2468999999999998
Q ss_pred CCeEEEeCCCCCceeeccCCCHHHHH--HHHhhhhhh
Q 009753 252 GWKSMYFKPNKPAFLGVAPVTLDIAL--VQMKRWSEG 286 (526)
Q Consensus 252 Gwrs~y~~~~~~~~~g~aP~~l~~~~--~Qr~RWa~G 286 (526)
| +.+|+++.. ..+-..|.+..... +|+.||.+.
T Consensus 201 g-~~~~~~~~~-~~~r~~~~s~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 201 Y-PFYPLDEEL-DLNYITDQSIHFQLFELEKNEFVRN 235 (255)
T ss_dssp C-CBEEEEEEE-EEEEEC--------------CTGGG
T ss_pred C-CEEEecCcE-EEEEEcCCccchhHHHHHHHHHHHh
Confidence 7 688888753 33455666666655 455555443
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.41 E-value=5.4e-13 Score=144.09 Aligned_cols=219 Identities=7% Similarity=0.022 Sum_probs=138.9
Q ss_pred cCCCCc---eEEEEeCCCChHHHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCc
Q 009753 34 KQDHQS---IVQIIVDGRDTNAVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYAND 110 (526)
Q Consensus 34 ~~~~~~---~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~ 110 (526)
.+.+|. +|.|+||+|+|+..++.-.+.|+++++..++| .++++|+|.|++. ++||+|+++|+|..+ +
T Consensus 91 ~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~flD~D~~~-~ 160 (501)
T 2ffu_A 91 KKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRR-----EGLMRSRVRGADA----AQAKVLTFLDSHCEC-N 160 (501)
T ss_dssp HHSCGGGEEEEEEEECSCSCTHHHHGGGGBTTEEEEECSSC-----CHHHHHHHHHHHH----CCSSEEEECCSSEEE-C
T ss_pred hhCchhhceeEEEEECCCCchHHHHHHhcCCCEEEEECCCC-----cCHHHHHHHHHHh----cCCCEEEEECCCccc-C
Confidence 445554 89999999998754444446789999998875 5799999999999 899999999999999 6
Q ss_pred HHHHHHHHHHhhcccCCCcEEEEecCcccccCCcc----------ccchhhH-----HHHHHHHHHHH-h---hcCCeee
Q 009753 111 GDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN----------DLYANSY-----LVVNQVELAGI-G---SYDAALY 171 (526)
Q Consensus 111 p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~----------d~~~~~~-----~~f~~~~~~g~-d---~~~~~~~ 171 (526)
|++|.+++..+.+.. . ++|.......+.+.. ..+.... ........... + ....+..
T Consensus 161 p~~L~~ll~~~~~~~---~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (501)
T 2ffu_A 161 EHWLEPLLERVAEDR---T-RVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMI 236 (501)
T ss_dssp TTCHHHHHHHHHHCT---T-EEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSC
T ss_pred ccHHHHHHHHHHhCC---C-eEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccc
Confidence 999999999987532 2 344322111111100 0000000 00000001111 1 1223456
Q ss_pred eccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCc---cchHHHHHHH
Q 009753 172 CGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCA---AEDVVTGLTI 248 (526)
Q Consensus 172 ~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~sv---tED~~t~~rl 248 (526)
.|++.++||+++..+ |||+++.. .||+++++|+
T Consensus 237 ~g~~~~irr~~~~~i--------------------------------------------Ggfde~~~~~g~ED~dl~~Rl 272 (501)
T 2ffu_A 237 AGGLFVMDKFYFEEL--------------------------------------------GKYDMMMDVWGGENLEISFRV 272 (501)
T ss_dssp CSSSEEEEHHHHHHT--------------------------------------------TCCCTTCCSSSSHHHHHHHHH
T ss_pred cceEEEEEHHHHHHh--------------------------------------------CCCCccccccCcchHHHHHHH
Confidence 788999999999753 67877643 8999999999
Q ss_pred HhCCCeEEEeCCCCCceeec----c----CCC-----HHHHHHHHhhhhhhhHHHHHhhccccccc------cCCcchhh
Q 009753 249 QCRGWKSMYFKPNKPAFLGV----A----PVT-----LDIALVQMKRWSEGMFQIFLSKYCPFIYG------HGKIKFGA 309 (526)
Q Consensus 249 ~~~Gwrs~y~~~~~~~~~g~----a----P~~-----l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~------~~~l~~~q 309 (526)
...|+++.|++... +.-. . |.. .....+...+|..+..+.++.+ .|.... ..++.+++
T Consensus 273 ~~~G~~i~~~p~~~--v~H~~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~~-~p~~~~~~~g~~~~r~~lr~ 349 (501)
T 2ffu_A 273 WQCGGSLEIIPCSR--VGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAA-VPSARNVPYGNIQSRLELRK 349 (501)
T ss_dssp HHTTCEEEEEEEEE--EEECCCSSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHHH-CGGGGGCCCCCCHHHHHHHH
T ss_pred HhcCCeEEEccCcE--EEEEccCcCCCcCCccchhHHHHHHHHHHHHHHHHHHHHHhhc-CcccccCCccchHHHHHHHH
Confidence 99999999987531 1111 1 222 2344555667878777776654 565421 12344566
Q ss_pred hhhh
Q 009753 310 QMGY 313 (526)
Q Consensus 310 rl~y 313 (526)
++..
T Consensus 350 ~l~c 353 (501)
T 2ffu_A 350 KLSC 353 (501)
T ss_dssp HTTC
T ss_pred hcCC
Confidence 6653
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.38 E-value=2.6e-13 Score=149.27 Aligned_cols=206 Identities=12% Similarity=0.053 Sum_probs=135.2
Q ss_pred cCCCCc---eEEEEeCCCChHH----HHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC
Q 009753 34 KQDHQS---IVQIIVDGRDTNA----VDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM 106 (526)
Q Consensus 34 ~~~~~~---~v~VldD~~~~~~----~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~ 106 (526)
.+++|. +|.|+||+|+|+. +++...+.|+++++..++| .++++|+|.|++. +++|+|+++|+|.
T Consensus 137 ~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~fLD~D~ 207 (570)
T 2d7i_A 137 NRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-----EGLIRTRMLGASV----ATGDVITFLDSHC 207 (570)
T ss_dssp HHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEECCSSE
T ss_pred hcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-----CCHHHHHHHHHHh----cCCCEEEEEcCCc
Confidence 345554 7999999998764 2333346789999988875 6899999999999 8999999999999
Q ss_pred CCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCcc-------ccchh--hHHHHHHHHHH--------HHhhcCCe
Q 009753 107 YANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN-------DLYAN--SYLVVNQVELA--------GIGSYDAA 169 (526)
Q Consensus 107 ~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~-------d~~~~--~~~~f~~~~~~--------g~d~~~~~ 169 (526)
.+ +|++|.+++..+.+.. .++ |.....+.+.+.. ..... ....++..... .......+
T Consensus 208 ~~-~p~~L~~ll~~l~~~~---~~v-v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (570)
T 2d7i_A 208 EA-NVNWLPPLLDRIARNR---KTI-VCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESP 282 (570)
T ss_dssp EE-CTTCSHHHHHHHHHCT---TEE-EEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECS
T ss_pred cc-cccHHHHHHHHHHhCC---CEE-EeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecc
Confidence 99 7999999999987532 333 3221111111100 00000 00000000000 00112234
Q ss_pred eeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCCCc---cchHHHHH
Q 009753 170 LYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCA---AEDVVTGL 246 (526)
Q Consensus 170 ~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~sv---tED~~t~~ 246 (526)
..+|++.++||+++..+ |||+.+.. .||+++++
T Consensus 283 ~~~g~~~~irr~~~~~i--------------------------------------------GgfDe~~~~~g~ED~dl~~ 318 (570)
T 2d7i_A 283 VMAGGLFAVDRKWFWEL--------------------------------------------GGYDPGLEIWGGEQYEISF 318 (570)
T ss_dssp SCCSSSEEEEHHHHHHT--------------------------------------------TSSCTTCCSSSSHHHHHHH
T ss_pred cccceEEEEEHHHHHhc--------------------------------------------CCCCCcccccCcchHHHHH
Confidence 56799999999999753 77887643 69999999
Q ss_pred HHHhCCCeEEEeCCCCCc--eeeccCC-------CHHHHHHHHhhhhhhhHHHHHhhcccc
Q 009753 247 TIQCRGWKSMYFKPNKPA--FLGVAPV-------TLDIALVQMKRWSEGMFQIFLSKYCPF 298 (526)
Q Consensus 247 rl~~~Gwrs~y~~~~~~~--~~g~aP~-------~l~~~~~Qr~RWa~G~lqi~~~~~~p~ 298 (526)
|+...||+++|++..... +.+..|. ..+...+...||....-+.+..+ .|.
T Consensus 319 Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~-~p~ 378 (570)
T 2d7i_A 319 KVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR-RPE 378 (570)
T ss_dssp HHHHTTCEEEEEEEEEEEECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTT-CGG
T ss_pred HHHhCCCeEEEccCeEEEEEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhc-Ccc
Confidence 999999999998763211 1122332 14667777889999999888765 453
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.34 E-value=1.6e-12 Score=143.82 Aligned_cols=193 Identities=16% Similarity=0.099 Sum_probs=132.7
Q ss_pred cccCCCCc-eEEEEeCCCChHHHH---HhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC
Q 009753 32 VTKQDHQS-IVQIIVDGRDTNAVD---KEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY 107 (526)
Q Consensus 32 ~~~~~~~~-~v~VldD~~~~~~~~---~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~ 107 (526)
...|+|+. +|.|+||+++|++.+ +...+.|++++++ ++| .++++|+|.|++. ++||||+++|+|.+
T Consensus 397 ~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~n-----~G~~~a~n~g~~~----a~g~~i~~ld~D~~ 466 (625)
T 2z86_A 397 ALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKN-----KGIGSASNTAVRL----CRGFYIGQLDSDDF 466 (625)
T ss_dssp HHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-ECC-----CCHHHHHHHHHHH----CCSSEEEECCTTCE
T ss_pred HHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CCC-----CCHHHHHHHHHHh----cCCCEEEEECCCcc
Confidence 34566764 799999999987433 3334578899986 443 5899999999999 89999999999999
Q ss_pred CCcHHHHHHHHHHhh-cccCCCcEEEEecCcccccCCccccchh-hHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcC
Q 009753 108 ANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKNDLYAN-SYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSG 185 (526)
Q Consensus 108 ~~~p~~L~~~v~~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~-~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 185 (526)
+ +|++|.+++..|. +| ++++|.+...+.+.+....... ....+ ..+.+....++|++.++||+++..
T Consensus 467 ~-~~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~r~~~~~ 535 (625)
T 2z86_A 467 L-EPDAVELCLDEFRKDL----SLACVYTTNRNIDREGNLISNGYNWPIY------SREKLTSAMICHHFRMFTARAWNL 535 (625)
T ss_dssp E-CTTHHHHHHHHHHHCT----TCSEEEEEEEEECTTSCEEEECCCCSSC------CHHHHTTSCCCCSCEEEEHHHHTT
T ss_pred c-ChhHHHHHHHHHHhCC----CeeEEEeeeEEECCCCCEeccCcccccC------CHHHHhhcccCCceEEEEHHHHHH
Confidence 9 7999999998885 44 6777877655544332211000 00000 011123346788999999999975
Q ss_pred CCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC-CccchHHHHHHHHhCCCeEEEeCCCCCc
Q 009753 186 AKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG-CAAEDVVTGLTIQCRGWKSMYFKPNKPA 264 (526)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~-svtED~~t~~rl~~~Gwrs~y~~~~~~~ 264 (526)
+ |||+.. ...||.++.+|+...| ++.|+++.. .
T Consensus 536 ~--------------------------------------------ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~-~ 569 (625)
T 2z86_A 536 T--------------------------------------------EGFNESISNAVDYDMYLKLSEVG-PFKHINKIC-Y 569 (625)
T ss_dssp T--------------------------------------------TCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEE-E
T ss_pred h--------------------------------------------CCCCCccCChHHHHHHHHHHHhC-CEEEeCCcE-E
Confidence 3 788776 4689999999999999 899998742 1
Q ss_pred ee--eccCCCHHHHHHHHhhhhhhhHHHH
Q 009753 265 FL--GVAPVTLDIALVQMKRWSEGMFQIF 291 (526)
Q Consensus 265 ~~--g~aP~~l~~~~~Qr~RWa~G~lqi~ 291 (526)
.+ .....+.....+|+.+|.+...+.+
T Consensus 570 ~~r~h~~~~s~~~~~~~~~~~~~~~~~~l 598 (625)
T 2z86_A 570 NRVLHGENTSIKKLDIQKENHFKVVNESL 598 (625)
T ss_dssp EEECC----CCSSHHHHHHHHHHHHHHHT
T ss_pred EEEECCCccchhhHHHHHHHHHHHHHHHH
Confidence 11 3345566667788877766554443
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.07 E-value=1.8e-10 Score=128.67 Aligned_cols=190 Identities=12% Similarity=0.012 Sum_probs=117.3
Q ss_pred CceEEEEeCCCChH-----HHHHhccCCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHH
Q 009753 38 QSIVQIIVDGRDTN-----AVDKEGCQLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGD 112 (526)
Q Consensus 38 ~~~v~VldD~~~~~-----~~~~~~~~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~ 112 (526)
+.+|.|+||+|+|. +.+......|+++++..+ | .|.|+|.|.|++.+....++|||+.+|+|.++ +|+
T Consensus 212 ~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~~-N-----~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~-~pd 284 (657)
T 4fix_A 212 IGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQP-N-----LGGSGGYSRVMYEALKNTDCQQILFMDDDIRL-EPD 284 (657)
T ss_dssp EEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEECC-C-----CHHHHHHHHHHHHHHHHCCCSEEEEECSSEEE-CTH
T ss_pred CCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEECC-C-----CCHHHHHHHHHHHHHhcCCCCEEEEECCCCcc-Chh
Confidence 34799999999762 222222234679999866 5 57899999999984211268999999999999 799
Q ss_pred HHHHHHHHhhcccCCCcEEEEecCcccccCCc-----c---c--cc--hhhHHH-----H----HH---HHHHHHh-hcC
Q 009753 113 AIREALCFLLDEKREHEIAFVQHPQRFDNICK-----N---D--LY--ANSYLV-----V----NQ---VELAGIG-SYD 167 (526)
Q Consensus 113 ~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~-----~---d--~~--~~~~~~-----f----~~---~~~~g~d-~~~ 167 (526)
+|.+++.++.+. ++++.|+......+... . + .+ ...... | .. ......+ ...
T Consensus 285 ~L~~ll~~l~~~---~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~ 361 (657)
T 4fix_A 285 SILRVLAMHRFA---KAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRID 361 (657)
T ss_dssp HHHHHHHHHHHB---SSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCC
T ss_pred HHHHHHHHHHhC---CCcEEEEeEEecCCCCceeeecccEecccccccccccccccccccccccccccccccccccccee
Confidence 999999998743 24555543221111100 0 0 00 000000 0 00 0011111 122
Q ss_pred CeeeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccCCCCC-CccchHHHHH
Q 009753 168 AALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG-CAAEDVVTGL 246 (526)
Q Consensus 168 ~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG~~~~-svtED~~t~~ 246 (526)
.....|+++++||+++..+ ||++.. .-.||++.++
T Consensus 362 v~~~~g~~~lirr~v~~~v--------------------------------------------Ggfd~~F~~~ED~Dl~l 397 (657)
T 4fix_A 362 VDYNGWWTCMIPRQVAEEL--------------------------------------------GQPLPLFIKWDDADYGL 397 (657)
T ss_dssp CSBCCTTEEEEEHHHHHHH--------------------------------------------CSCCSCSSSSHHHHHHH
T ss_pred ccccchhHhHhhHHHHHHh--------------------------------------------CCChhHhccCcHHHHHH
Confidence 3456889999999999642 555421 2359999999
Q ss_pred HHHhCCCeEEEeCCCCCceeecc----C--CCHHHHHHHHhhh
Q 009753 247 TIQCRGWKSMYFKPNKPAFLGVA----P--VTLDIALVQMKRW 283 (526)
Q Consensus 247 rl~~~Gwrs~y~~~~~~~~~g~a----P--~~l~~~~~Qr~RW 283 (526)
|+..+||+++|++.. .++-.. + ..++.+...|.|+
T Consensus 398 R~~~~G~ki~~~p~a--~V~H~~~~~~~~~s~~r~Yy~~RN~l 438 (657)
T 4fix_A 398 RAAEHGYPTVTLPGA--AIWHMAWSDKDDAIDWQAYFHLRNRL 438 (657)
T ss_dssp HHHHTTCCEEEEEEE--EEEECCSSSSCCTTSTHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCE--EEEEcCcCccccccHHHHHHHHHHHH
Confidence 999999999999874 333221 1 1267777777775
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.03 E-value=8.1e-10 Score=112.91 Aligned_cols=92 Identities=14% Similarity=0.143 Sum_probs=65.0
Q ss_pred cccCCCC--ceEEEEeCCCChHHHHHhccCCCcEEEEEccC----CCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCC
Q 009753 32 VTKQDHQ--SIVQIIVDGRDTNAVDKEGCQLPTLVYMAREK----RPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCD 105 (526)
Q Consensus 32 ~~~~~~~--~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~----~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD 105 (526)
...|+++ .+|.|+||+|+|++.+.... +. ..+..|.+ ++ ...||++|+|.|++. ++||||+++|+|
T Consensus 70 l~~q~~~~~~eiivVDdgS~D~t~~~~~~-~~-~~~~~~~~~~~~~~--~n~G~~~a~n~g~~~----a~gd~i~~lD~D 141 (329)
T 3ckj_A 70 ISPLVDGLVDELIVLDSGSTDDTEIRAVA-AG-ARVVSREQALPEVP--IRPGKGEALWRSLAA----SRGDIVVFVDSD 141 (329)
T ss_dssp HGGGBTTTBSEEEEEECSCCSSHHHHHHH-TT-CEEEEHHHHCTTSC--CCCSHHHHHHHHHHH----CCCSEEEECCTT
T ss_pred HHHhhCCCCcEEEEEeCCCCchHHHHHHH-hh-hhhccceeeeccCC--CCCCHHHHHHHHHHh----CCCCEEEEECCC
Confidence 3455554 57999999999875443321 11 23333210 11 136899999999998 899999999999
Q ss_pred CC-CCcHHHHHHHHHHhh-cccCCCcEEEEecC
Q 009753 106 MY-ANDGDAIREALCFLL-DEKREHEIAFVQHP 136 (526)
Q Consensus 106 ~~-~~~p~~L~~~v~~f~-d~~~~~~va~VQ~p 136 (526)
.. + +|++|.+++..+. +| ++++|++.
T Consensus 142 ~~~~-~p~~l~~l~~~l~~~~----~~~~v~g~ 169 (329)
T 3ckj_A 142 LINP-HPMFVPWLVGPLLTGD----GVHLVKSF 169 (329)
T ss_dssp EESC-CTTHHHHHHHHHHSCS----SCCEEEEE
T ss_pred CCCc-ChHHHHHHHHHHHhCC----CccEEEEE
Confidence 99 8 7999999998864 44 67777764
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.96 E-value=6.9e-11 Score=133.50 Aligned_cols=167 Identities=12% Similarity=-0.019 Sum_probs=0.0
Q ss_pred cccCCCC-ceEEEEeCCCChHHHHH---hccC-CCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC
Q 009753 32 VTKQDHQ-SIVQIIVDGRDTNAVDK---EGCQ-LPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM 106 (526)
Q Consensus 32 ~~~~~~~-~~v~VldD~~~~~~~~~---~~~~-~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~ 106 (526)
...|+++ .+|.|+||+|+|++.+. ...+ -++++++..++| .|+++|.|.|++. ++||+|+++|+|.
T Consensus 24 ll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n-----~G~~~arN~gi~~----A~gdyI~flD~Dd 94 (729)
T 3l7i_A 24 IKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDEN-----SGHAHARNIALEE----VETPYFMFLDADD 94 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCC-----CCHHHHHHHHHHh----ccCCEEEEECCCC
Confidence 4456665 46999999999874433 2223 247999988765 6799999999998 8999999999999
Q ss_pred CCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhHHHHHHHHHHHHhhcCCe--eeeccceeEehhhhc
Q 009753 107 YANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAA--LYCGTGCFHRRESLS 184 (526)
Q Consensus 107 ~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~--~~~Gtg~~~RR~aL~ 184 (526)
++ .|++|++++..+.++ ++.+... ...+.... .+.......... ..+....... ...|.++++||+++.
T Consensus 95 ~~-~p~~l~~l~~~l~~~----d~v~~~~--~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rr~~l~ 165 (729)
T 3l7i_A 95 EL-ASYAITFYLEKFNNT----DGLIAPI--HSFTTQRP-QFVDLDRVRVEY-FNAKENINSFLRKQSACNIIFRTAIVR 165 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CC-ChhHHHHHHHHhcCC----CEEEEee--EEeecCCC-ccccccceeeee-ecchhhHHHHhhccchhheeeeHHHHH
Confidence 99 799999999998743 3333322 11111111 111000000000 0011111111 235667899999997
Q ss_pred CCCCCccccccccccCCCCcChHHHHHhhchhccccccccCcccccc-CCCCC-CccchHHHHHHHHhCCCeEEEeCC
Q 009753 185 GAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM-GLVYG-CAAEDVVTGLTIQCRGWKSMYFKP 260 (526)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~g-G~~~~-svtED~~t~~rl~~~Gwrs~y~~~ 260 (526)
.. | ||+.+ ...||.++.+|+..+|+++.|+++
T Consensus 166 ~~--------------------------------------------gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~ 199 (729)
T 3l7i_A 166 AH--------------------------------------------HIRFNENLNTYVDWSFVLEYMKYVNKFVRIFN 199 (729)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred Hc--------------------------------------------CCCcCCCCCcccCHHHHHHHHHhcCCEEEecC
Confidence 53 4 67776 478999999999999999999933
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=98.79 E-value=2.9e-09 Score=107.28 Aligned_cols=136 Identities=13% Similarity=0.004 Sum_probs=90.0
Q ss_pred CCcHHHHHHHH----HHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCcccccCCccccchhhH
Q 009753 77 NFKAGAMNALI----RVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSY 152 (526)
Q Consensus 77 ~~KAGaLN~~l----~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~ 152 (526)
..||.++|.|+ +. +++|||+.+|+|.++ +|+.+. +... ..|..+... .+.+.
T Consensus 111 f~~a~a~N~G~~~al~~----A~gd~i~flD~D~i~-~~d~~~-----~~~~---------~~p~~~~~~--~~~~~--- 166 (287)
T 2fy7_A 111 FNRAKLLNVGFQEALKD----YDYTCFVFSDVDLIP-MNDHNA-----YRCF---------SQPRHISVA--MDKFG--- 166 (287)
T ss_dssp CCHHHHHHHHHHHHHHH----SCCCEEEEECTTEEE-SBTTSC-----CSCC---------SSCEECCCE--EGGGT---
T ss_pred cchhhhhhhHHHHHHHh----CCCCEEEEECCCccc-CCCcce-----EecC---------CCCceEEEe--ecccc---
Confidence 35899999999 66 899999999999999 688521 1100 011111000 00000
Q ss_pred HHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhccccccccCccccccC
Q 009753 153 LVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMG 232 (526)
Q Consensus 153 ~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~gG 232 (526)
+ +..+ ..+.|.+.++||+++..+ ||
T Consensus 167 ---~------~~~~--~~~~G~~~~~rr~~f~~v--------------------------------------------gG 191 (287)
T 2fy7_A 167 ---F------SLPY--VQYFGGVSALSKQQFLTI--------------------------------------------NG 191 (287)
T ss_dssp ---T------SCSS--TTCCCSEEEEEHHHHHHT--------------------------------------------TS
T ss_pred ---c------CCCc--CceeeeEEEEEHHHHHHc--------------------------------------------CC
Confidence 0 0001 235688889999999753 78
Q ss_pred CCCCCc---cchHHHHHHHHhCCCeEEEeCCCCCce----------eeccCCCHHHHHHHHhhhhhhhHHHH
Q 009753 233 LVYGCA---AEDVVTGLTIQCRGWKSMYFKPNKPAF----------LGVAPVTLDIALVQMKRWSEGMFQIF 291 (526)
Q Consensus 233 ~~~~sv---tED~~t~~rl~~~Gwrs~y~~~~~~~~----------~g~aP~~l~~~~~Qr~RWa~G~lqi~ 291 (526)
|+..-. .||.++..|++.+||++.+.++....+ ....|+.+..+.+||.||+++.+..+
T Consensus 192 Fde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 192 FPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp CCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred CCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 877543 599999999999999887443311111 23578999999999999999988754
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.56 E-value=5.1e-07 Score=94.60 Aligned_cols=85 Identities=14% Similarity=0.131 Sum_probs=61.8
Q ss_pred CceEEEEeCCCChHHHHHhccCCCcEEEEEccC----CCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCC-CCcHH
Q 009753 38 QSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREK----RPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMY-ANDGD 112 (526)
Q Consensus 38 ~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~----~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~-~~~p~ 112 (526)
+.+|.|+||+|+|.+.+.... +. ..++.+.. ++ ...+|++|+|.|++. ++||+|+++|||.. + +|+
T Consensus 126 ~~EIIVVDDgStD~T~~i~~~-~~-~~v~~~~~~~i~~~--~n~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~-~p~ 196 (387)
T 3f1y_A 126 IDQILVVDADSEDGTAGVAAS-HG-AEVYSENELMSGYG--DAHGKGDAMWRALSV----TRGDLVLYIDADTRDF-RPQ 196 (387)
T ss_dssp CSEEEEEECSCSSSHHHHHHH-TT-CEEEEGGGTTGGGC--SCCSHHHHHHHHTTT----CCSSEEEECCTTCSSC-CTH
T ss_pred CeEEEEEcCcCCccHHHHHHH-hC-chhcccceeEecCC--ccCCHHHHHHHHHHh----cCCCEEEEEcCCCCcC-CHH
Confidence 568999999999875443321 11 34444321 11 136899999999998 89999999999999 8 799
Q ss_pred HHHHHHHHhh-cccCCCcEEEEec
Q 009753 113 AIREALCFLL-DEKREHEIAFVQH 135 (526)
Q Consensus 113 ~L~~~v~~f~-d~~~~~~va~VQ~ 135 (526)
+|.+++..+. +| ++++|.+
T Consensus 197 ~L~~l~~~l~~~p----~~d~v~G 216 (387)
T 3f1y_A 197 LAYGVLGPVLEVP----GVRFVKA 216 (387)
T ss_dssp HHHTTHHHHHHST----TCCEEEE
T ss_pred HHHHHHHHHHHCC----CceEEEE
Confidence 9999998885 33 4566654
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=98.46 E-value=8.2e-07 Score=86.89 Aligned_cols=53 Identities=4% Similarity=-0.040 Sum_probs=42.5
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcc-cCCCcEEEEe
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDE-KREHEIAFVQ 134 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~-~~~~~va~VQ 134 (526)
.+.|.|+|.|++. ++|||++++|+|.++ +|++|.+++.++.+. ..+++++.|.
T Consensus 60 ~g~a~a~N~Gi~~----A~g~yl~fln~D~~~-~~~~l~~l~~~~~~~~~~~~~vg~vg 113 (249)
T 2nxv_A 60 FHGFSWHKQMLPR----CKGRYVIFCHEDVEL-VDRGYDDLVAAIEALEEADPKWLVAG 113 (249)
T ss_dssp CCTTTHHHHHGGG----CCSSEEEEEETTEEC-SSCCHHHHHHHHHHHHHHCTTEEEEE
T ss_pred ccHHHHHHHHHHh----cCCCEEEEECCCccc-CccHHHHHHHHHHhcccCCCCeeEEe
Confidence 4568899999998 899999999999999 799999999988740 0012677663
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.10 E-value=1.5e-05 Score=83.71 Aligned_cols=78 Identities=14% Similarity=-0.004 Sum_probs=54.3
Q ss_pred ceEEEEeCCCChHHHHHhc---cC-----CCcEEEEEccCCCCCCCCCcHHHHHHHH----HHccccCCCcEEEEeCCCC
Q 009753 39 SIVQIIVDGRDTNAVDKEG---CQ-----LPTLVYMAREKRPGCPHNFKAGAMNALI----RVSSVISNGPVILNLDCDM 106 (526)
Q Consensus 39 ~~v~VldD~~~~~~~~~~~---~~-----~p~v~yv~R~~~p~~~~~~KAGaLN~~l----~~~~~~s~~~~i~ilDaD~ 106 (526)
.+|.|+||||+|.+.+... .+ -.+++.+.. ++++....||++|++.|+ +. ++||+|+++|||.
T Consensus 29 ~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~-~r~~~~n~GkG~Al~~G~~~Al~~----a~gd~vv~mDADl 103 (397)
T 2bo4_A 29 VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQ-ERLGTLRPGKGDGMNTALRYFLEE----TQWERIHFYDADI 103 (397)
T ss_dssp CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEEC-CCCSSSSSSHHHHHHHHHHHHHHH----CCCSEEEECCTTC
T ss_pred eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEec-ccCCCCCCCHHHHHHHHHHHHHHh----CCCCEEEEEcCCC
Confidence 5799999999998544332 11 123333321 111101368999999999 66 8899999999999
Q ss_pred C-CCcHHHHHHHHHHhh
Q 009753 107 Y-ANDGDAIREALCFLL 122 (526)
Q Consensus 107 ~-~~~p~~L~~~v~~f~ 122 (526)
. . +|+.+.+++..+.
T Consensus 104 q~~-~P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 104 TSF-GPDWITKAEEAAD 119 (397)
T ss_dssp SSC-CHHHHHHHHHHHH
T ss_pred CCC-CHHHHHHHHHHHH
Confidence 6 5 5999999887764
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=95.83 E-value=0.0096 Score=62.01 Aligned_cols=38 Identities=18% Similarity=0.119 Sum_probs=32.5
Q ss_pred CCCcHHHHHHHHHHccccC---CCcEEEEeCCCCCCCcHHHHHHHHH
Q 009753 76 HNFKAGAMNALIRVSSVIS---NGPVILNLDCDMYANDGDAIREALC 119 (526)
Q Consensus 76 ~~~KAGaLN~~l~~~~~~s---~~~~i~ilDaD~~~~~p~~L~~~v~ 119 (526)
++||+.||-.++.. + ++|+|+++|||-+ .|.++.+.+.
T Consensus 142 r~GKG~Am~aGl~~----A~~~~gd~Vv~~DaDl~--iP~~v~~~~k 182 (394)
T 2zu9_A 142 RSGKGEGMLVGLLL----AKAIGAEYVGFVDADNY--IPGAVNEYVK 182 (394)
T ss_dssp CCSHHHHHHHHHHH----HHHTTCSEEEECCSCBS--CHHHHHHHHH
T ss_pred cCChHHHHHHHHHH----HhhCCCCEEEEEeCCCC--CHHHHHHHHH
Confidence 35999999999998 5 8999999999995 4888877654
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=94.83 E-value=0.08 Score=54.30 Aligned_cols=84 Identities=14% Similarity=0.138 Sum_probs=55.3
Q ss_pred cCCCCceEEEEeCCCChHH---HH---Hhcc-CCCcEEEEEccCC--------C---------CCCCCCcHHHHHHHHHH
Q 009753 34 KQDHQSIVQIIVDGRDTNA---VD---KEGC-QLPTLVYMAREKR--------P---------GCPHNFKAGAMNALIRV 89 (526)
Q Consensus 34 ~~~~~~~v~VldD~~~~~~---~~---~~~~-~~p~v~yv~R~~~--------p---------~~~~~~KAGaLN~~l~~ 89 (526)
...|...|.|+||||.|.. ++ ...+ .-.++..++-++. - +..+.+|+++|=.|+..
T Consensus 75 qi~~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viHQkn~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~ 154 (391)
T 2wvl_A 75 GIPHEALILVASNSSPDRFQMERDLLEEFAHLTERPALIFHQKDPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVF 154 (391)
T ss_dssp TSCTTSEEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEETTCHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHH
T ss_pred cCCCCceEEEEECCCCCChHhHHHHHHHHHhhcccceEEEeccChHHHHHHHhcCcchhhcccccccccchHHHHHHHHH
Confidence 4456778999999998774 33 2222 2345777763210 0 22357999999999987
Q ss_pred ccccCCCcEEEEeCCCCCCCcHHHHHHHHHH
Q 009753 90 SSVISNGPVILNLDCDMYANDGDAIREALCF 120 (526)
Q Consensus 90 ~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~ 120 (526)
+. +..++||..+|||.++ ..+ +.+.+..
T Consensus 155 Ak-~~~geYVgFvDADdyi-~~~-v~Eyvk~ 182 (391)
T 2wvl_A 155 AA-LSGRRYVGFIDADNYF-PGA-VWEYVRA 182 (391)
T ss_dssp HH-HTTCSEEEECCSCBSC-HHH-HHHHHHH
T ss_pred HH-hcCCCEEEEEcCcCCC-ccC-HHHHHHH
Confidence 21 1389999999999999 344 4444433
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=93.96 E-value=0.15 Score=52.23 Aligned_cols=91 Identities=11% Similarity=0.035 Sum_probs=53.9
Q ss_pred CCceEEEEeCCCChHHHHHhccCCCcEEEEEccCC---CCCCCCCcH-----------HHHHHHHHHccccCCCcEEEEe
Q 009753 37 HQSIVQIIVDGRDTNAVDKEGCQLPTLVYMAREKR---PGCPHNFKA-----------GAMNALIRVSSVISNGPVILNL 102 (526)
Q Consensus 37 ~~~~v~VldD~~~~~~~~~~~~~~p~v~yv~R~~~---p~~~~~~KA-----------GaLN~~l~~~~~~s~~~~i~il 102 (526)
.+..|.|.||++.+++.+....-...+.++.-++. +-.+++.|. .++|.++.. .++++++++
T Consensus 31 ~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~~y~~ia~h~~~al~~vf~~----~~~~~vIiL 106 (343)
T 1fo8_A 31 ELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQGYYKIARHYRWALGQIFHN----FNYPAAVVV 106 (343)
T ss_dssp TTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHHHHHHHHHHHHHHHHHHTT----SCCSEEEEE
T ss_pred CCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhcCcccchhHhHHHHHHHHHHHHh----ccCCEEEEE
Confidence 35569999999988754433210012455421110 111223343 355555544 589999999
Q ss_pred CCCCCCCcHHHHHH---HHHHhhcccCCCcEEEEec
Q 009753 103 DCDMYANDGDAIRE---ALCFLLDEKREHEIAFVQH 135 (526)
Q Consensus 103 DaD~~~~~p~~L~~---~v~~f~d~~~~~~va~VQ~ 135 (526)
|.|+++ .|||++- ++..+.+ ++.+..|.+
T Consensus 107 EDDl~~-spdF~~y~~~~l~~y~~---D~~I~~ISa 138 (343)
T 1fo8_A 107 EDDLEV-APDFFEYFQATYPLLKA---DPSLWCVSA 138 (343)
T ss_dssp ETTEEE-CTTHHHHHHHHHHHHHH---CTTEEEEES
T ss_pred cCCCeE-CHHHHHHHHHHHHHhhc---CCcEEEEec
Confidence 999999 7999954 4444542 337887753
No 19
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=75.58 E-value=15 Score=34.26 Aligned_cols=24 Identities=17% Similarity=0.149 Sum_probs=21.0
Q ss_pred CCCcEEEEeCCC---CCCCcHHHHHHHH
Q 009753 94 SNGPVILNLDCD---MYANDGDAIREAL 118 (526)
Q Consensus 94 s~~~~i~ilDaD---~~~~~p~~L~~~v 118 (526)
+++++++.+||| .-- +|+.+.+.+
T Consensus 52 ~~~dhllfIDAD~~~I~F-dPe~V~rLl 78 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEI-DFQKVEAKF 78 (203)
T ss_dssp TTCCEEEEECTTEEEEEC-CHHHHHHHH
T ss_pred CCCCEEEEEeCCCCcccc-CHHHHHHHH
Confidence 678999999999 877 698888876
No 20
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=75.19 E-value=7.1 Score=38.55 Aligned_cols=153 Identities=14% Similarity=0.065 Sum_probs=87.5
Q ss_pred CCCcEEEEEc-cCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcccCCCcEEEEecCc
Q 009753 59 QLPTLVYMAR-EKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQ 137 (526)
Q Consensus 59 ~~p~v~yv~R-~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~~~~~va~VQ~pq 137 (526)
.+..-+||.- .++ ...-||..||.|...+ +.+.|+++.-|.|.+|.| |-. .|--++. ..|.
T Consensus 81 ~l~y~I~VieQ~~~---~~FNRa~LlNvGf~ea--~~~~d~~ifHDVDLlP~d-d~n----~Y~c~~~--------~~P~ 142 (287)
T 3lw6_A 81 GVAHHIFVLNQVDR---FRFNRASLINVGFQFA--SDVYDYIAMHDVDLLPLN-DNL----LYEYPSS--------LGPL 142 (287)
T ss_dssp TCEEEEEEEEECSS---SCCCHHHHHHHHHHHS--CTTCCEEEEECTTEEECC-TTS----CCCCCCT--------TCCE
T ss_pred CCceEEEEEecCCC---CccchhheecccHHHH--hccCCEEEEecccccccC-CCc----cccCCCC--------CCce
Confidence 3444445443 332 3467999999999884 256799999999999943 311 1111110 0122
Q ss_pred ccccCCccccchhhHHHHHHHHHHHHhhcCCeeeeccceeEehhhhcCCCCCccccccccccCCCCcChHHHHHhhchhc
Q 009753 138 RFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLA 217 (526)
Q Consensus 138 ~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~ 217 (526)
.+. .++.. + .+....+.|....++|+.+..+
T Consensus 143 Hls-~~~~~-~----------------~~~Y~~~~GGv~a~~re~f~kV------------------------------- 173 (287)
T 3lw6_A 143 HIA-GPKLH-P----------------KYHYDNFVGGILLVRREHFKQM------------------------------- 173 (287)
T ss_dssp ESS-CTTTC-S----------------SCCCTTCCCSEEEEEHHHHHHT-------------------------------
T ss_pred EEe-ecccc-C----------------CCCcCCccccEEeccHHHHHHc-------------------------------
Confidence 221 11110 0 0111235677777888877543
Q ss_pred cccccccCccccccCCCCCCc---cchHHHHHHHHhCCCeEEEeCCC---C-Ccee---------eccCCCHHHHHHHHh
Q 009753 218 SCSYEKNTHWGKEMGLVYGCA---AEDVVTGLTIQCRGWKSMYFKPN---K-PAFL---------GVAPVTLDIALVQMK 281 (526)
Q Consensus 218 ~c~ye~~t~wg~~gG~~~~sv---tED~~t~~rl~~~Gwrs~y~~~~---~-~~~~---------g~aP~~l~~~~~Qr~ 281 (526)
+||+..-. -||.+...|+...|.++...... + .++. ...|..+...-.+++
T Consensus 174 -------------NGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~ 240 (287)
T 3lw6_A 174 -------------NGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRK 240 (287)
T ss_dssp -------------TSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTS
T ss_pred -------------CCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcE
Confidence 23332111 49999999999999987654321 0 1122 123556667788999
Q ss_pred hhhhhhHHHH
Q 009753 282 RWSEGMFQIF 291 (526)
Q Consensus 282 RWa~G~lqi~ 291 (526)
||..+.+.-+
T Consensus 241 r~~~dGLnsl 250 (287)
T 3lw6_A 241 RDHKTGLDNV 250 (287)
T ss_dssp CCSSCSGGGC
T ss_pred EccCCCCeee
Confidence 9988887654
No 21
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=52.90 E-value=32 Score=33.55 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=24.3
Q ss_pred CCCcEEEEeCCCCCCCcHHHHHHHHHHhhccc
Q 009753 94 SNGPVILNLDCDMYANDGDAIREALCFLLDEK 125 (526)
Q Consensus 94 s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~~ 125 (526)
.+.+.++..|.|+++ +.+-|.+.+..+ ||.
T Consensus 92 ~~~~Wf~~~DDDtyv-~~~nL~~~L~~~-d~~ 121 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYV-NPKALLQLLKTF-PQD 121 (280)
T ss_dssp HTCSEEEEEETTEEE-CHHHHHHHHTTS-CTT
T ss_pred CCCcEEEEeCCCcEE-cHHHHHHHHHhC-CCC
Confidence 589999999999999 588888877655 553
No 22
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=50.84 E-value=34 Score=32.21 Aligned_cols=45 Identities=16% Similarity=0.111 Sum_probs=32.1
Q ss_pred cHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhc
Q 009753 79 KAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLD 123 (526)
Q Consensus 79 KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d 123 (526)
....+-+||+......+.++++++|||+=.-.++.+++++..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 356777788763211125899999999754479999999988864
No 23
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=47.78 E-value=36 Score=30.73 Aligned_cols=40 Identities=10% Similarity=0.103 Sum_probs=31.9
Q ss_pred CcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHh
Q 009753 78 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFL 121 (526)
Q Consensus 78 ~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f 121 (526)
+-++++-.|++.. .+.+.+++++||+ .+ +++.+++++..+
T Consensus 72 G~~~si~~al~~~---~~~~~vlv~~~D~P~i-~~~~i~~l~~~~ 112 (197)
T 3d5n_A 72 GISTSLKLGLRFF---KDYDAVLVALGDMPFV-TKEDVNKIINTF 112 (197)
T ss_dssp CHHHHHHHHHHHT---TTSSEEEEEETTCCCS-CHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhh---ccCCcEEEEeCCcccc-CHHHHHHHHHHh
Confidence 5678888888873 2348999999999 56 689999988766
No 24
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=46.50 E-value=47 Score=29.41 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=31.7
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHH
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCF 120 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~ 120 (526)
.+-++++-.+++... .+.+.+++++||+ .+ +++.+++++..
T Consensus 79 ~g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~-~~~~i~~l~~~ 120 (197)
T 2wee_A 79 RGCAASLRVALARVH--PRATGIVLMLGDQPQV-APATLRRIIDV 120 (197)
T ss_dssp -CCHHHHHHHHTTSC--TTEEEEEEEETTCTTC-CHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhc--ccCCeEEEEeCCcCCC-CHHHHHHHHhh
Confidence 367888999988621 2568999999999 56 68999988876
No 25
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=40.39 E-value=73 Score=30.26 Aligned_cols=43 Identities=5% Similarity=-0.109 Sum_probs=34.4
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHH----HHHHHHHHhhcc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGD----AIREALCFLLDE 124 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~----~L~~~v~~f~d~ 124 (526)
.+-++++-.++... +.+.++++.||++. +++ .+++++.++.+.
T Consensus 106 ~Gt~~al~~a~~~l----~~~~~lv~~~D~~~-~~~~~~~~l~~l~~~~~~~ 152 (281)
T 3juk_A 106 KGLGHAILTGEALI----GNEPFAVILADDLC-ISHDHPSVLKQMTSLYQKY 152 (281)
T ss_dssp CCHHHHHHHTHHHH----CSSCEEEECTTEEE-ECTTSCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHc----CCCCEEEEeCCeec-cCccchHHHHHHHHHHHHc
Confidence 57789999998873 34678889999988 688 899999888643
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=40.39 E-value=67 Score=29.36 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=32.1
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+.+++++ +++. .+.|.+++++||+ .. +++.+++++..+.+
T Consensus 72 ~g~~~~~~-~~~~----~~~~~vlv~~~D~P~~-~~~~i~~l~~~~~~ 113 (234)
T 2y6p_A 72 SGSDRVLY-VVRD----LDVDLIINYQGDEPFV-YEEDIKLIFRELEK 113 (234)
T ss_dssp SHHHHHHH-HHTT----CCCSEEEECCTTCCCC-CHHHHHHHHHHHHH
T ss_pred cchHHHHH-HHHh----CCCCEEEEecCCcCcC-CHHHHHHHHHHHHh
Confidence 56777774 5554 4578999999999 87 68999999987764
No 27
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=40.30 E-value=1.1e+02 Score=29.23 Aligned_cols=44 Identities=18% Similarity=0.107 Sum_probs=32.3
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+.++ +..+++... ..+.|.++++++|+ .. +++.+++++..+.+
T Consensus 81 ~Gt~~-i~~a~~~l~-~~~~d~vlv~~gD~Pli-~~~~i~~li~~~~~ 125 (256)
T 3tqd_A 81 SGTER-IAEAAVALG-FEDDEIIVCLQGDEPLI-PPDAIRKLAEDLDE 125 (256)
T ss_dssp SHHHH-HHHHHHHTT-CCTTCEEEEECTTCCCC-CHHHHHHHHHHHHH
T ss_pred CcHHH-HHHHHHHhC-cCCCCEEEEEeCCcccC-CHHHHHHHHHHHHh
Confidence 45554 666777631 12578999999999 45 69999999988864
No 28
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=39.25 E-value=1.3e+02 Score=28.86 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=33.1
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhcc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDE 124 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d~ 124 (526)
.+.++ +..+++... ..+.+.++++++|+-.-+++.+++++..+.++
T Consensus 90 ~Gt~~-i~~~~~~l~-~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~ 135 (264)
T 3k8d_A 90 SGTER-LAEVVEKCA-FSDDTVIVNVQGDEPMIPATIIRQVADNLAQR 135 (264)
T ss_dssp SHHHH-HHHHHHHHT-CCTTCEEEEECTTCTTCCHHHHHHHHHHHHTS
T ss_pred CCHHH-HHHHHHHhc-cCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc
Confidence 45555 666666532 13679999999999332699999999988754
No 29
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=35.96 E-value=80 Score=28.81 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=33.1
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLD 123 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d 123 (526)
.+.+.++-.+++... .+.|.+++++||+-.-+++.+++++..+.+
T Consensus 80 ~g~~~sv~~~l~~~~--~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~ 124 (228)
T 1ezi_A 80 ASSISGVIHALETIG--SNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (228)
T ss_dssp CHHHHHHHHHHHHHT--CCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred CChHHHHHHHHHHhC--CCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 345777888888732 246899999999843368899998877653
No 30
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=35.73 E-value=1.1e+02 Score=26.95 Aligned_cols=42 Identities=7% Similarity=-0.052 Sum_probs=32.3
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHH
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCF 120 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~ 120 (526)
.+-++++..+++... .+.+.+++++||+-.-+++.+++++..
T Consensus 79 ~g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 79 LGCSSSLKSALTWVD--PTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp TTCCCHHHHHHHTSC--TTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhhh--ccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 456788999998731 256899999999964358889888876
No 31
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=35.11 E-value=1.2e+02 Score=27.51 Aligned_cols=44 Identities=7% Similarity=0.011 Sum_probs=33.4
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+..+++-.+++... .+.++++++|+|+ .. +++.+++++..+.+
T Consensus 81 ~~~~~sv~~al~~~~--~~~~~vl~~d~d~P~~-~~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 81 KERQDSVYSGLQEID--VNSELVCIHDSARPLV-NTEDVEKVLKDGSA 125 (228)
T ss_dssp SSHHHHHHHHHTTSC--TTCSEEEEEETTCTTC-CHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhc--cCCCEEEEecCCCccC-CHHHHHHHHHHHHh
Confidence 356788888887632 2358999999997 56 68999999987754
No 32
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=34.39 E-value=85 Score=31.99 Aligned_cols=53 Identities=17% Similarity=0.123 Sum_probs=38.0
Q ss_pred cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 62 TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 62 ~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+.++..+. ..+-++++-.+++.. .+.+.+++++||+ .. .++.+++++..+.+
T Consensus 73 ~~~~v~~~~-----~~g~~~~i~~~~~~~---~~~~~~lv~~~D~P~i-~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 73 SLNWVLQAE-----QLGTGHAMQQAAPHF---ADDEDILMLYGDVPLI-SVDTLQRLLAAKPE 126 (459)
T ss_dssp --CEEECSS-----CCCHHHHHHHHGGGS---CTTSEEEEEETTCTTC-CHHHHHHHHHHCCT
T ss_pred CcEEEeCCC-----CCCcHHHHHHHHHhc---CCCCcEEEEeCCcccC-CHHHHHHHHHHHhh
Confidence 356665332 356788999998872 3468999999999 45 58999999888754
No 33
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=32.96 E-value=82 Score=28.42 Aligned_cols=40 Identities=10% Similarity=0.135 Sum_probs=32.4
Q ss_pred CcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHh
Q 009753 78 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFL 121 (526)
Q Consensus 78 ~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f 121 (526)
..++++..|++.. .+.+.+++++||+ .. +++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~-~~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALT-PPALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTC-CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccC-CHHHHHHHHHHH
Confidence 3588888888872 2678999999999 56 688999999877
No 34
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=30.96 E-value=1.8e+02 Score=27.07 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=31.3
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+.++ +-.+++... ..+.+.++++++|+ .. .++.+++++..+.+
T Consensus 74 ~Gt~~-~~~~~~~l~-~~~~d~vlv~~gD~Pli-~~~~i~~l~~~~~~ 118 (252)
T 3oam_A 74 SGTER-LAEVVAKMA-IPADHIVVNVQGDEPLI-PPAIIRQVADNLAA 118 (252)
T ss_dssp SHHHH-HHHHHHHTT-CCTTSEEEECCTTCTTC-CHHHHHHHHHHHHH
T ss_pred CcHHH-HHHHHHhcC-cCCCCEEEEEeCCeeec-CHHHHHHHHHHHHh
Confidence 45666 444555421 12578999999999 55 68999999988864
No 35
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=28.91 E-value=1.6e+02 Score=26.85 Aligned_cols=41 Identities=5% Similarity=0.090 Sum_probs=31.6
Q ss_pred HHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHHHHHHhhc
Q 009753 80 AGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLD 123 (526)
Q Consensus 80 AGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~~v~~f~d 123 (526)
.+++-.+++.. .+.|.+++++||+-.-+++.+++++..+.+
T Consensus 82 ~~~v~~al~~~---~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~ 122 (229)
T 1qwj_A 82 LDAIVEFLNYH---NEVDIVGNIQATSPCLHPTDLQKVAEMIRE 122 (229)
T ss_dssp HHHHHHHHTTC---TTCSEEEEECTTCTTCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhc---CCCCEEEEecCCCCcCCHHHHHHHHHHHHh
Confidence 46777777762 367899999999953368999999988764
No 36
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=27.00 E-value=26 Score=31.39 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=29.4
Q ss_pred CcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 78 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 78 ~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
+-++++..+++. . .+.+++++||+ .+ +++.+++++..+.+
T Consensus 79 g~~~si~~al~~----~-~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 79 GYIEDLNECIGY----F-SEPFLVVSSDLINL-KSKIINSIVDYFYC 119 (196)
T ss_dssp --CCCCCTTTTT----C-SSCEEEEETTEESC-CHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHh----C-CCCEEEEeCCcccC-CHHHHHHHHHHHHh
Confidence 344556666665 3 78999999999 44 58999999998864
No 37
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=25.53 E-value=1.5e+02 Score=28.08 Aligned_cols=53 Identities=13% Similarity=0.302 Sum_probs=36.1
Q ss_pred HHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhcccCCCcEEEEecC
Q 009753 81 GAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLDEKREHEIAFVQHP 136 (526)
Q Consensus 81 GaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d~~~~~~va~VQ~p 136 (526)
+++..+++.... .+.|.+++++||+ .+ +|+.+++++..+.+. .+..++.+-+|
T Consensus 77 ~~i~~a~~~~~~-~~~d~vlv~~gD~Pli-~~~~i~~li~~~~~~-~~~~~at~~~~ 130 (253)
T 4fcu_A 77 DRLSEVARIKGW-DADDIIVNVQGDEPLL-PAQLVQQVAKLLVDK-PNCSMSTLCEP 130 (253)
T ss_dssp HHHHHHHHHHTC-CTTCEEEECCTTCTTC-CHHHHHHHHHHHHHC-TTCSEEEEEEE
T ss_pred HHHHHHHHhcCc-CCCCEEEEEeCCcccC-CHHHHHHHHHHHHhC-CCCCEEEEeEE
Confidence 467777776321 2568999999999 56 699999999888642 12245544443
No 38
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=24.05 E-value=74 Score=28.77 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=32.0
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHH
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCF 120 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~ 120 (526)
.+-++++-.+++. .+.+.+++++||+ .+ +++.+++++..
T Consensus 77 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~ 116 (201)
T 1e5k_A 77 PGPLAGMLSVMQQ----EAGEWFLFCPCDTPYI-PPDLAARLNHQ 116 (201)
T ss_dssp CSHHHHHHHHHHH----CCSSEEEEEETTCTTC-CTTHHHHHHHT
T ss_pred CCHHHHHHHHHHh----CCCCcEEEEeCCcCcC-CHHHHHHHHhh
Confidence 4678889999988 4679999999999 56 58888888765
No 39
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=22.80 E-value=1.7e+02 Score=29.53 Aligned_cols=43 Identities=12% Similarity=-0.005 Sum_probs=33.2
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
.+-++++-.+++.. .+.+.+++++||+ .. .++.+++++..+.+
T Consensus 80 ~g~~~~~~~~~~~~---~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 80 LGTAHAVQQAAPFF---KDNENIVVLYGDAPLI-TKETLEKLIEAKPE 123 (456)
T ss_dssp CCHHHHHHHHGGGC---CTTSEEEEEETTCTTC-CHHHHHHHHHHCCT
T ss_pred CCcHHHHHHHHHhc---CCCCeEEEEcCCccee-CHHHHHHHHHHHhc
Confidence 46788888888762 2378999999999 45 57889998887753
No 40
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=21.71 E-value=1.1e+02 Score=27.89 Aligned_cols=45 Identities=7% Similarity=0.148 Sum_probs=33.1
Q ss_pred CcHHHHHHHHHHcccc-C--CCcEEEEeCCCC-CCCcHHHHHHHHHHhhc
Q 009753 78 FKAGAMNALIRVSSVI-S--NGPVILNLDCDM-YANDGDAIREALCFLLD 123 (526)
Q Consensus 78 ~KAGaLN~~l~~~~~~-s--~~~~i~ilDaD~-~~~~p~~L~~~v~~f~d 123 (526)
+.+.++-.+++..... . +.+++++++||+ .. +++.+++++..+.+
T Consensus 85 ~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~-~~~~i~~l~~~~~~ 133 (236)
T 2vsh_A 85 DRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFI-TLRMIQDNIQLAQN 133 (236)
T ss_dssp SHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTC-CHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhccCCCCCEEEEecCCcccC-CHHHHHHHHHHHHh
Confidence 4677788888763100 2 458999999999 66 68999999988764
No 41
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=21.68 E-value=2.9e+02 Score=26.56 Aligned_cols=74 Identities=14% Similarity=0.056 Sum_probs=45.7
Q ss_pred ceEEE-EeCCCChHHHHHhcc--CCCcEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHH
Q 009753 39 SIVQI-IVDGRDTNAVDKEGC--QLPTLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIR 115 (526)
Q Consensus 39 ~~v~V-ldD~~~~~~~~~~~~--~~p~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~ 115 (526)
..|.| .++...+.+.+..+. ..+.+.|+. ++. ..+-++++-.++... ...++++++.||+...+++.++
T Consensus 52 ~~i~vv~~~~~~~~i~~~~~~~~~~~~~~~i~-~~~----~~gt~~al~~a~~~l---~~~~~~lv~~~D~~~~~~~~~~ 123 (308)
T 2qh5_A 52 DETLIVCNEKHYFLALEEIKNEIKNKSVGFLL-ESL----SKNTANAIALSALMS---DKEDLLIVTPSDHLIKDLQAYE 123 (308)
T ss_dssp SEEEEEEEGGGHHHHHHHTTTTCSSCEEEEEE-ESS----CCCHHHHHHHHHHTS---CTTSEEEEEESSCBCCCHHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHhhCCCccEEEe-CCC----CCChHHHHHHHHHHh---CCCCeEEEEcCCccccCHHHHH
Confidence 34444 444323334444432 224556664 433 257899998888762 2356899999999873578788
Q ss_pred HHHHH
Q 009753 116 EALCF 120 (526)
Q Consensus 116 ~~v~~ 120 (526)
+++..
T Consensus 124 ~~~~~ 128 (308)
T 2qh5_A 124 NAIKK 128 (308)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88876
No 42
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=20.40 E-value=1.8e+02 Score=27.82 Aligned_cols=52 Identities=8% Similarity=-0.017 Sum_probs=38.4
Q ss_pred cEEEEEccCCCCCCCCCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCc--HHHHHHHHHHhhc
Q 009753 62 TLVYMAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYAND--GDAIREALCFLLD 123 (526)
Q Consensus 62 ~v~yv~R~~~p~~~~~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~--p~~L~~~v~~f~d 123 (526)
.+.|+. +.. ..+-++++-.++.. .+.+.++++.||+.. + +..+++++..+.+
T Consensus 107 ~i~~~~-~~~----~~Gt~~al~~a~~~----~~~~~~lv~~~D~~~-~~~~~~l~~l~~~~~~ 160 (297)
T 2ux8_A 107 NIAYVR-QQE----PMGLGHAVWCARDI----VGDEPFAVLLPDDFM-FGQPGCLKQMVDAYNK 160 (297)
T ss_dssp SEEEEE-CCS----CCCHHHHHHTTHHH----HCSSCEEEECTTEEE-ESSSCHHHHHHHHHHH
T ss_pred ceEEEe-CCC----CCChHHHHHHHHHH----cCCCcEEEEeCCeec-CCChHHHHHHHHHHHh
Confidence 466664 332 35788999888887 235788899999997 6 6789999888764
No 43
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=20.35 E-value=3e+02 Score=24.49 Aligned_cols=38 Identities=5% Similarity=0.002 Sum_probs=30.7
Q ss_pred CCcHHHHHHHHHHccccCCCcEEEEeCCCCCCCcHHHHHH-HH
Q 009753 77 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIRE-AL 118 (526)
Q Consensus 77 ~~KAGaLN~~l~~~~~~s~~~~i~ilDaD~~~~~p~~L~~-~v 118 (526)
.+-++++-.|++. .+.+.+++++||+-.-+++.+++ ++
T Consensus 82 ~g~~~~i~~al~~----~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 82 SASIIGLYTALKH----AKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp CCHHHHHHHHHHH----CSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred CCcHHHHHHHHHH----cCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 5788999999987 45789999999995326888888 76
Done!