Query 009755
Match_columns 526
No_of_seqs 188 out of 1734
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 16:56:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009755.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009755hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1292 Xanthine/uracil transp 100.0 2E-92 4.3E-97 728.8 36.5 499 21-525 1-507 (510)
2 COG2233 UraA Xanthine/uracil p 100.0 1.5E-79 3.3E-84 642.4 36.5 409 21-486 5-436 (451)
3 PRK11412 putative uracil/xanth 100.0 1.1E-74 2.3E-79 613.5 42.2 403 32-486 8-430 (433)
4 TIGR03616 RutG pyrimidine util 100.0 1.8E-67 4E-72 561.0 43.4 402 19-486 17-428 (429)
5 PRK10720 uracil transporter; P 100.0 1.1E-67 2.4E-72 562.8 41.1 395 20-493 2-413 (428)
6 TIGR00801 ncs2 uracil-xanthine 100.0 2.1E-65 4.6E-70 544.5 40.1 392 28-482 1-415 (415)
7 TIGR03173 pbuX xanthine permea 100.0 5.7E-65 1.2E-69 540.7 39.4 388 38-484 1-406 (406)
8 PF00860 Xan_ur_permease: Perm 100.0 5.3E-61 1.2E-65 507.4 25.8 371 32-437 1-386 (389)
9 COG2252 Xanthine/uracil/vitami 100.0 6.6E-29 1.4E-33 259.3 33.3 383 18-484 5-412 (436)
10 TIGR00843 benE benzoate transp 99.9 1.3E-24 2.8E-29 226.5 33.9 314 33-405 22-348 (395)
11 COG0659 SUL1 Sulfate permease 99.9 1.3E-22 2.7E-27 222.3 32.4 318 31-410 21-371 (554)
12 PF03594 BenE: Benzoate membra 99.9 1.1E-21 2.3E-26 201.4 31.8 310 33-404 6-331 (378)
13 COG3135 BenE Uncharacterized p 99.9 3.6E-20 7.8E-25 186.1 30.5 312 33-406 21-348 (402)
14 PRK11660 putative transporter; 99.9 7.3E-19 1.6E-23 194.7 33.5 313 30-398 28-389 (568)
15 TIGR00815 sulP high affinity s 99.9 1.2E-18 2.6E-23 192.9 34.4 319 31-398 14-369 (563)
16 PF00916 Sulfate_transp: Sulfa 99.5 4.9E-14 1.1E-18 142.6 12.5 241 146-415 1-275 (280)
17 KOG0236 Sulfate/bicarbonate/ox 99.5 2.9E-12 6.2E-17 143.9 25.9 314 48-400 91-440 (665)
18 TIGR00834 ae anion exchange pr 98.4 0.00049 1.1E-08 79.4 32.3 316 71-411 403-797 (900)
19 KOG1172 Na+-independent Cl/HCO 98.2 0.00055 1.2E-08 77.4 26.0 315 69-410 392-772 (876)
20 PF11840 DUF3360: Protein of u 98.1 0.0021 4.5E-08 66.4 24.9 343 18-416 52-419 (492)
21 PF00955 HCO3_cotransp: HCO3- 96.0 0.0057 1.2E-07 67.0 3.8 182 213-411 277-478 (510)
22 COG0659 SUL1 Sulfate permease 90.4 4 8.7E-05 45.7 13.4 122 283-416 24-156 (554)
23 TIGR00815 sulP high affinity s 85.9 8.5 0.00018 43.2 12.4 119 284-413 18-152 (563)
24 PRK11660 putative transporter; 79.6 22 0.00048 39.9 12.5 117 283-410 32-155 (568)
25 TIGR00843 benE benzoate transp 71.4 75 0.0016 34.1 13.2 131 71-233 256-393 (395)
26 PF13792 Sulfate_tra_GLY: Sulf 70.9 11 0.00024 31.2 5.5 60 30-102 15-76 (84)
27 PF03594 BenE: Benzoate membra 62.0 49 0.0011 35.2 9.4 115 278-396 2-127 (378)
28 PRK15034 nitrate/nitrite trans 54.1 3.3E+02 0.0072 29.9 15.4 126 31-168 32-165 (462)
29 PLN00028 nitrate transmembrane 52.2 3.4E+02 0.0073 29.4 14.5 39 57-95 63-105 (476)
30 TIGR03173 pbuX xanthine permea 50.8 1.5E+02 0.0032 31.7 11.2 76 70-167 254-329 (406)
31 COG4129 Predicted membrane pro 49.7 2.1E+02 0.0045 30.1 11.6 78 72-170 14-91 (332)
32 PF00860 Xan_ur_permease: Perm 44.9 1.7E+02 0.0036 31.2 10.4 103 55-181 254-357 (389)
33 TIGR00801 ncs2 uracil-xanthine 42.0 1.4E+02 0.003 32.2 9.3 49 363-411 97-148 (415)
34 PRK11412 putative uracil/xanth 37.3 5.3E+02 0.011 28.1 12.8 77 70-168 276-352 (433)
35 TIGR00834 ae anion exchange pr 32.9 6.2E+02 0.014 30.3 13.1 114 279-398 367-497 (900)
36 PRK05122 major facilitator sup 28.6 6E+02 0.013 26.1 11.4 61 37-97 20-87 (399)
37 TIGR00883 2A0106 metabolite-pr 28.1 5.5E+02 0.012 25.7 10.8 36 51-86 241-276 (394)
38 KOG2325 Predicted transporter/ 27.9 45 0.00099 36.8 2.8 78 26-103 28-114 (488)
39 PRK10489 enterobactin exporter 27.1 7.3E+02 0.016 25.8 12.3 49 48-97 36-88 (417)
40 COG3817 Predicted membrane pro 26.8 6.8E+02 0.015 25.4 11.3 95 279-377 164-262 (313)
41 PTZ00207 hypothetical protein; 26.5 9.9E+02 0.021 27.1 14.7 80 17-98 13-98 (591)
42 KOG4085 Uncharacterized conser 22.5 1.6E+02 0.0035 27.0 4.7 44 356-403 29-72 (175)
43 TIGR00822 EII-Sor PTS system, 22.2 4E+02 0.0087 27.0 8.1 39 377-416 164-202 (265)
44 PRK09556 uhpT sugar phosphate 22.1 2.7E+02 0.0058 29.9 7.5 145 4-161 5-153 (467)
45 TIGR01299 synapt_SV2 synaptic 21.9 1.3E+03 0.028 26.9 13.7 39 59-97 196-238 (742)
46 PF05216 UNC-50: UNC-50 family 21.7 86 0.0019 31.1 3.1 54 460-525 90-143 (231)
47 COG3135 BenE Uncharacterized p 21.2 2.9E+02 0.0064 29.3 6.9 50 363-415 109-158 (402)
No 1
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=100.00 E-value=2e-92 Score=728.83 Aligned_cols=499 Identities=60% Similarity=1.030 Sum_probs=472.6
Q ss_pred cccccCCCCCHHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHH-HHHHHHHHHHHHHHHHHHHHhCCCcceEEech
Q 009755 21 FQMFLSAGFGKAETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDK-ARVIQTLLFVSGINTLLQALFGTRLPAVVGGS 99 (526)
Q Consensus 21 ~~y~~~d~~p~~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~-~~li~a~ll~sGi~tllq~~~G~rlPiv~g~s 99 (526)
+.|+++|.|||...+++|+||++.|+++++++|.+++.+++.+++|. +++||+.++++||.|++|++||.|||+++|+|
T Consensus 1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S 80 (510)
T KOG1292|consen 1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS 80 (510)
T ss_pred CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence 36899999999999999999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhccccccCcch----hhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHh
Q 009755 100 FAYVIPIAYIINDSSLQRITDDH----ERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGL 175 (526)
Q Consensus 100 fa~i~~~~~i~~~~~~~~~~~~~----~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l 175 (526)
|+|+++..++.....+.+..+++ +.|++.+++++|+.++++.+++++|++|+.+.+.|++.|+.+.+.+.++|+++
T Consensus 81 fafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l 160 (510)
T KOG1292|consen 81 FAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGL 160 (510)
T ss_pred eehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhh
Confidence 99999999998865565544333 47899999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccchhhHHHHHHHHHHHHHh--hhccC-CCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCcccccc
Q 009755 176 FQRGFPLLGNCVEIGIPMLLLVIGLSQY--LKHVR-PFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISC 252 (526)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~l~~ii~l~~~--~~~~~-~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~ 252 (526)
++.+.+..+.||+++++.++++++++.| +++.. ...++++++++++++++.+.|++|.+++..|.||.++..++.++
T Consensus 161 ~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t~~~~ 240 (510)
T KOG1292|consen 161 FQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTTQSSC 240 (510)
T ss_pred HHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCccccCCcc
Confidence 9999999999999999999999999999 53332 23446789999999999999999999999999999888889999
Q ss_pred ccCccCcCCCCCccccCccccccCCcccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHH
Q 009755 253 RTDRANLISTAPWFKFPYPLQWGPPTFSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILL 332 (526)
Q Consensus 253 ~~d~~~~v~~a~~~~lP~~~~~g~P~F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~il 332 (526)
|+|.+..++++||+.+|+|++||.|.||++....++...+++++||+|++.+++|.+.+++++++.+|||+..||+++++
T Consensus 241 RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL 320 (510)
T KOG1292|consen 241 RTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLL 320 (510)
T ss_pred cccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHH
Confidence 99988778999999999999999999999999999999999999999999999999998888889999999999999999
Q ss_pred hhhcCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhhhc
Q 009755 333 DGLFGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGLSFLQF 412 (526)
Q Consensus 333 aglfG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l~~ 412 (526)
+|+||+..++|.++||+|+++.||++||++.+++|.+|+++|++.||+|++++||.|++||+++++|+++...|+++++.
T Consensus 321 ~gl~G~gtG~Tt~~ENigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSnLQf 400 (510)
T KOG1292|consen 321 AGLFGTGTGSTTSVENIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSNLQF 400 (510)
T ss_pred HHhhCCCccceeeccceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhhhee
Confidence 99999999999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccEEeehhHHHhhhhhhhhhhcccCCCCCCcccccccchhHHHHHHhcchhHHHHHHHHHHhhcCCCCCccccc
Q 009755 413 TNMNCMRNLVITGLSLFLGISIPQFFNEYWNPQHHGLVHTNAGWFNAFLNTIFSSPPTVGLIVAVFLDNTLEVEKSKKDR 492 (526)
Q Consensus 413 v~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~~gi~~g~l~ai~Ln~~~~~~~~~~~~ 492 (526)
+|+++.||.+|+|+|+++|+.+|++|+++ ++|.++++++++++++.++++.+.+|+++|++||+..|+. +||||
T Consensus 401 ~dlns~RNl~IlG~Sif~gLsip~yF~~~-----~~~v~Tg~~~~d~ilnvll~~~m~Vggi~A~~LDnt~~ga-tr~~R 474 (510)
T KOG1292|consen 401 VDLNSSRNLFILGFSIFLGLSIPQYFEQY-----PGPVHTGNGWFDDILNVLLSSRMLVGGILAFILDNTLPGA-TREQR 474 (510)
T ss_pred eccccccchhhhhHHHHHhccHHHHHHhC-----CCccccCcHHHHHHHHHHhhHHHHHHHHHhhhccccCCCC-ChHhc
Confidence 99999999999999999999999999986 6689999999999999999999999999999999999954 79999
Q ss_pred CCcccccccccCCCCCCCccccCCcccccCCCC
Q 009755 493 GMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFPP 525 (526)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 525 (526)
|+++|+|+.+.+.|++++++|+||+++||+||+
T Consensus 475 G~~~w~~~~~~~~d~~~~e~Y~lP~~~n~~f~~ 507 (510)
T KOG1292|consen 475 GLRWWDKFETFNGDVRNEEFYSLPFNLNRFFPR 507 (510)
T ss_pred CCcchhccccccCCccccccccCcHHHHhhccc
Confidence 999999999999999999999999999999996
No 2
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.5e-79 Score=642.40 Aligned_cols=409 Identities=31% Similarity=0.539 Sum_probs=380.1
Q ss_pred cccccCCCCCHHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHH----hCCCcceEE
Q 009755 21 FQMFLSAGFGKAETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQAL----FGTRLPAVV 96 (526)
Q Consensus 21 ~~y~~~d~~p~~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~----~G~rlPiv~ 96 (526)
..+..||++|++|.+++|+||+++|+++++++|++++++.|+++||+++++|+++++||++|++|.+ +|.|+|+++
T Consensus 5 ~~~~~~~~~~~~~~~~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~l 84 (451)
T COG2233 5 IYVLVDERLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYL 84 (451)
T ss_pred ccCcccccCChHHHHHHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeE
Confidence 3445788889999999999999999999999999999999999999999999999999999999997 567999999
Q ss_pred echhhhHHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhh-hHhhhcCcccHHHHHHHHHHHh
Q 009755 97 GGSFAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWG-LFSRFFSPLGIAPVVGLVGLGL 175 (526)
Q Consensus 97 g~sfa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~-~l~~~fPp~V~G~~i~lIGl~l 175 (526)
|+||++++++..+..+++ ++.+.++|+++++|+++++++.. ++ |++|+|||+|+|.++++||++|
T Consensus 85 G~sFafi~p~i~~~~~~g------------~~~~~~~G~ii~ag~~~~li~~~--~~~~l~rlfPPvVtG~Vi~~IGlsL 150 (451)
T COG2233 85 GSSFAFVAPMIAIGGTTG------------DGIAALLGGIIAAGLVYFLISPI--VKIRLARLFPPVVTGPVVLVIGLSL 150 (451)
T ss_pred echHHHHHHHHHHHhccC------------CchHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCCceEEeEeeeehhhh
Confidence 999999999988876542 35999999999999999999975 56 9999999999999999999999
Q ss_pred HHhhhccccc--------------chhhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCC
Q 009755 176 FQRGFPLLGN--------------CVEIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAY 241 (526)
Q Consensus 176 ~~~~~~~~~~--------------~~~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~ 241 (526)
.+++++++++ +..+++.+++++++++++.|++ +|+.++|+|+++||++++.+|.
T Consensus 151 ~~vai~~~~G~~~~~~~~~~~~~~~l~la~~tl~~il~~~~f~~g~--------~~~i~ILiGlv~G~~la~~~G~---- 218 (451)
T COG2233 151 APVAINMAGGGPGAAGNPDFGSLENLGLALVTLLIILLINRFGKGF--------LRRIPILIGLVVGYLLALFMGM---- 218 (451)
T ss_pred HHHHHHHhhCCCCCCCCcccCchhHHHHHHHHHHHHHHHHHHhhhH--------HHHHHHHHHHHHHHHHHHHhCC----
Confidence 9999987541 3467888888888888888765 7999999999999999999873
Q ss_pred CCCCCccccccccCccCcCCCCCccccCccccccCCcccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCc
Q 009755 242 RGKPYTTQISCRTDRANLISTAPWFKFPYPLQWGPPTFSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSR 321 (526)
Q Consensus 242 ~~~~~~~~~~~~~d~~~~v~~a~~~~lP~~~~~g~P~F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r 321 (526)
+|++. +.++|||++|.+++|+. +|||.++++++++++++++|++||+.|+++.++++.+++++++|
T Consensus 219 ------------vdf~~-v~~a~w~~~P~~~~fg~-~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~r 284 (451)
T COG2233 219 ------------VDFSG-VAEAPWFALPTPFYFGM-AFDWGAILTMLPVAIVTIVEHTGDITATGEITGRDLDGKPRLRR 284 (451)
T ss_pred ------------cCccc-cccCceeeCCcccCCCe-eecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCCcCccCccccc
Confidence 57776 89999999999999998 99999999999999999999999999999999987766799999
Q ss_pred chhhHhHHHHHhhhcCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHH
Q 009755 322 GIGWQGIGILLDGLFGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGL 401 (526)
Q Consensus 322 ~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~ 401 (526)
++++||++++++|+||++|+|||+ ||+|+++.||++||++..+++++++++|++||+++++++||.||+||+.+++||+
T Consensus 285 g~~aDGlat~iag~fg~~p~Ttfa-qNiGvv~lT~v~Sr~V~~~aavili~lgl~pk~~al~~sIP~pVlGGa~ivmFG~ 363 (451)
T COG2233 285 GLLADGLATLIAGLFGGFPNTTFA-QNIGVVALTGVYSRYVIAGAAVILILLGLFPKFGALIQSIPSPVLGGAMLVLFGM 363 (451)
T ss_pred ceeeccHHHHHHHhcCCCCCCchh-hceeeeeeccCChhHHHHHHHHHHHHHHhhHHHHHHHHhCChhhhhHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccCCCc-cEEeehhHHHhhhhh---hhhhhcccCCCCCCcccccccchhHHHHHHhcchhHHHHHHHH
Q 009755 402 VASVGLSFLQFTNMNCMR-NLVITGLSLFLGISI---PQFFNEYWNPQHHGLVHTNAGWFNAFLNTIFSSPPTVGLIVAV 477 (526)
Q Consensus 402 i~~~Gi~~l~~v~~~~~r-n~~ivg~sl~~Gl~~---p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~~gi~~g~l~ai 477 (526)
+..+|+|++.+.|+|++| |.+|+++|+.+|++. |+++++ +|++++.+++||++.|+++|+
T Consensus 364 Ia~sGir~l~~~~~~~~~~Nl~IvAvsl~~Gig~~~~p~~~~~----------------~p~~~~~l~~sGia~g~i~AI 427 (451)
T COG2233 364 IAASGIRILIRNKVDRSRRNLLIVAVSLGLGIGVGAVPEVFLQ----------------LPAWLRPLLSSGIALGTLTAI 427 (451)
T ss_pred HHHHHHHHHHhcccccCccceeeehHHHHhCcchhcCchhhhh----------------CcHHHHHHHhccHHHHHHHHH
Confidence 999999999999998756 999999999999994 888887 699999999999999999999
Q ss_pred HHhhcCCCC
Q 009755 478 FLDNTLEVE 486 (526)
Q Consensus 478 ~Ln~~~~~~ 486 (526)
+||+++|++
T Consensus 428 vLNlll~~~ 436 (451)
T COG2233 428 VLNLLLPGE 436 (451)
T ss_pred HHHHhcccc
Confidence 999999954
No 3
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=100.00 E-value=1.1e-74 Score=613.52 Aligned_cols=403 Identities=19% Similarity=0.290 Sum_probs=353.9
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHHHHh
Q 009755 32 AETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAYIIN 111 (526)
Q Consensus 32 ~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~i~~ 111 (526)
++++++|+||+++|+++++++|+++++++|+|++|+.+++|++++++|++|++|+.+|+|||++||+||+++++++++..
T Consensus 8 ~~~~~lglQhvl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~~~~~~i~~ 87 (433)
T PRK11412 8 RESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITL 87 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHHHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999988863
Q ss_pred hccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhccccc------
Q 009755 112 DSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPLLGN------ 185 (526)
Q Consensus 112 ~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~~~~------ 185 (526)
... ..+ ..++.-++..+|+.+++|++++++|++++++|++|+|||+|+|+++++||++|++.+++++.+
T Consensus 88 ~~~--~~g---~~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~~ 162 (433)
T PRK11412 88 GEA--SRG---TPINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGIA 162 (433)
T ss_pred ccc--ccC---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccCc
Confidence 210 000 001123445566799999999999999999999999999999999999999999999885421
Q ss_pred ---------chhhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCccccccccCc
Q 009755 186 ---------CVEIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISCRTDR 256 (526)
Q Consensus 186 ---------~~~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~~~d~ 256 (526)
++.+++.++++++.++++.|+ ++|++++|+|+++||+++.... + .|+
T Consensus 163 ~~~~~~~~~~~~~a~~~l~~il~~~~~~~g--------~~~~~svLiGiv~G~v~a~~~~--g--------------~d~ 218 (433)
T PRK11412 163 DPNGKIQLPPFGLSVAVMCLVLAMIIFLPQ--------RIARYSLLVGTIVGWILWAFCF--P--------------SSH 218 (433)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHHHHHHHHHHHh--C--------------CCc
Confidence 123555666666666666554 4899999999999999865331 1 144
Q ss_pred cCcCCCCCccccCccccccCCc-ccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhh
Q 009755 257 ANLISTAPWFKFPYPLQWGPPT-FSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGL 335 (526)
Q Consensus 257 ~~~v~~a~~~~lP~~~~~g~P~-F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilagl 335 (526)
+. +.+++|. +++||.|. ||+.+++++++++++.++|++||++|+++..+++.+++++++|++++||++|+++|+
T Consensus 219 ~~-v~~a~w~----~~pfG~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~lagl 293 (433)
T PRK11412 219 SL-SGELHWQ----WFPLGSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVP 293 (433)
T ss_pred ch-hccCCce----eecCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHHHHh
Confidence 43 5778884 34589995 999999999999999999999999999999876655578999999999999999999
Q ss_pred cCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009755 336 FGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGLSFLQFTNM 415 (526)
Q Consensus 336 fG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l~~v~~ 415 (526)
||++|+|+|+ ||+|+++.||++||++..++|++++++|++||+++++++||.||+||+++++|+++..+|+|+++++|+
T Consensus 294 fg~~p~tt~s-qNvGvi~~TgV~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~~Gi~~l~~~~~ 372 (433)
T PRK11412 294 LAVIPFSPFV-SSIGLLTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLGSALVFSQQITF 372 (433)
T ss_pred cCCCCCCchh-hhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEeehhHHHhhhhh---h-hhhhcccCCCCCCcccccccchhHHHHHHhcchhHHHHHHHHHHhhcCCCC
Q 009755 416 NCMRNLVITGLSLFLGISI---P-QFFNEYWNPQHHGLVHTNAGWFNAFLNTIFSSPPTVGLIVAVFLDNTLEVE 486 (526)
Q Consensus 416 ~~~rn~~ivg~sl~~Gl~~---p-~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~~gi~~g~l~ai~Ln~~~~~~ 486 (526)
| +||.+|+|+|+.+|++. | +++++ +|++++++++||+++|+++|++||+++|++
T Consensus 373 ~-~rn~~ivg~sl~~Glg~~~~p~~~~~~----------------~P~~~~~~l~sgi~~g~l~AilLn~~~~~~ 430 (433)
T PRK11412 373 T-ARNIYRLALPLFVGIFLMALPPVYLQD----------------LPLTLRPLLSNGLLVGILLAVLMENLIPWE 430 (433)
T ss_pred C-cccchhhHHHHHHHhhHHhCCHHHHHH----------------ChHHHHHHHcCcHHHHHHHHHHHHhhcCcc
Confidence 8 79999999999999996 6 58887 699999999999999999999999999963
No 4
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=100.00 E-value=1.8e-67 Score=560.97 Aligned_cols=402 Identities=22% Similarity=0.367 Sum_probs=348.2
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHH-HhCCCcceEEe
Q 009755 19 QVFQMFLSAGFGKAETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQA-LFGTRLPAVVG 97 (526)
Q Consensus 19 ~~~~y~~~d~~p~~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~-~~G~rlPiv~g 97 (526)
++..|++|||||+++++++|+||+++|+++++++|+++ |+|++ ++++++|++|++|+ .+|+|+|+++|
T Consensus 17 ~~~~~~~d~~~p~~~~~~~GlQh~lam~~~~v~~Plil----gl~~~-------~tl~~sGi~TllQ~~~~G~rlP~v~G 85 (429)
T TIGR03616 17 EHHPVAPDERLPAAQTIVMGLQHAVAMFGATVLMPLLM----GFDPN-------LTILMSGIGTLLFFLITGGRVPSYLG 85 (429)
T ss_pred cCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCHh-------HHHHHHHHHHHHHHHHhCCCceeEEc
Confidence 34779999999999999999999999999999999995 68875 57999999999997 47999999999
Q ss_pred chhhhHHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhh---hhHhhhcCcccHHHHHHHHHHH
Q 009755 98 GSFAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVW---GLFSRFFSPLGIAPVVGLVGLG 174 (526)
Q Consensus 98 ~sfa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~---~~l~~~fPp~V~G~~i~lIGl~ 174 (526)
+||+|++++..+.... .. ++ .+++++++|+++++|++++++++++.+ ++++|+|||+|+|.++++||++
T Consensus 86 ~sf~f~~~~~~~~~~~---~~-~~----~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGls 157 (429)
T TIGR03616 86 SSAAFVGAVIAATGYN---GQ-GT----NPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLN 157 (429)
T ss_pred CcHHHHHHHHHHHhhc---cc-CC----cchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHH
Confidence 9999999887653211 00 01 136899999999999999999998654 8899999999999999999999
Q ss_pred hHHhhhccccc----chhhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCcccc
Q 009755 175 LFQRGFPLLGN----CVEIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQI 250 (526)
Q Consensus 175 l~~~~~~~~~~----~~~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~ 250 (526)
+++.++++.+. +| .++++++.++++.++.|+. +|++++|+|+++||++|+.++.. ++.
T Consensus 158 L~~vg~~~~~~~~~~~~-~al~tl~~i~l~~l~~~~~--------l~~~avLiGivvG~iva~~l~~~--~g~------- 219 (429)
T TIGR03616 158 LAPIAVKSVSASGFDSW-MAVLTILCIGAVAVFTRGM--------LQRLLILVGLIAAYLAYFILTNV--FGL------- 219 (429)
T ss_pred HHHHHHHhccccccccH-HHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhhh--cCC-------
Confidence 99999987542 33 4666666666667777655 79999999999999999876421 110
Q ss_pred ccccCccCcCCCCCccccCccccccCCcccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHH
Q 009755 251 SCRTDRANLISTAPWFKFPYPLQWGPPTFSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGI 330 (526)
Q Consensus 251 ~~~~d~~~~v~~a~~~~lP~~~~~g~P~F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ 330 (526)
.+++|++. +.+++|+++| +|+.|+||++.++++++.+++.++|++||+.++++..+++. +++++|++++||++|
T Consensus 220 ~~~vd~s~-v~~a~~~~lP---~~~~p~f~~~~il~~~~~~lv~~~esiG~~~a~~~~~~~~~--~~~i~r~l~adGl~t 293 (429)
T TIGR03616 220 GKAVDFSP-ISQAAWFGLP---NFHTPVFNANAMLLIAPVALILVAENLGHFKAVAGMTGRNL--DPYMGRAFVGDGLAT 293 (429)
T ss_pred CccccCcc-cccCccccCC---cCCCceEcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCCC--CchhccchhhhhHHH
Confidence 11357764 7789999999 46779999999999999999999999999999999887442 346999999999999
Q ss_pred HHhhhcCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhh
Q 009755 331 LLDGLFGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGLSFL 410 (526)
Q Consensus 331 ilaglfG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l 410 (526)
+++|++|+.|.|+|+ ||+|+++.||++||++...+++++++++++||++++++.||.||+||+++++|+++..+|+|++
T Consensus 294 ~~agl~g~~p~tt~~-en~g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~Gi~~l 372 (429)
T TIGR03616 294 MLSGSVGGTGVTTYA-ENIGVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVAGARIW 372 (429)
T ss_pred HHHHhcCCCCCccee-eeeeeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 9999999999999999999999999999999999999999999999999999999999999988
Q ss_pred --hccccCCCccEEeehhHHHhhhhhhhhhhcccCCCCCCcccccccchhHHHHHHhcchhHHHHHHHHHHhhcCCCC
Q 009755 411 --QFTNMNCMRNLVITGLSLFLGISIPQFFNEYWNPQHHGLVHTNAGWFNAFLNTIFSSPPTVGLIVAVFLDNTLEVE 486 (526)
Q Consensus 411 --~~v~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~~gi~~g~l~ai~Ln~~~~~~ 486 (526)
+++|++++||.+|+|+|+.+|++.- +.+++.+++||++.|+++|++||+++|++
T Consensus 373 ~~~~~d~~~~rn~~ivg~sl~~g~g~~----------------------~~~~~~~~~s~i~~~~~~ai~Ln~~l~~~ 428 (429)
T TIGR03616 373 VQNKVDLTQNGNLIMVAVTLVLGAGDF----------------------ALTIGAFTLGGIGTATFGAIVLNALLNRD 428 (429)
T ss_pred HhccCCcCccceeehhHHHHHHHhHHH----------------------HHHHHHHhhCcHHHHHHHHHHHHHhcCCC
Confidence 6889988889999999999999752 34567899999999999999999999943
No 5
>PRK10720 uracil transporter; Provisional
Probab=100.00 E-value=1.1e-67 Score=562.83 Aligned_cols=395 Identities=24% Similarity=0.413 Sum_probs=346.7
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHh-CCCcceEEec
Q 009755 20 VFQMFLSAGFGKAETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQALF-GTRLPAVVGG 98 (526)
Q Consensus 20 ~~~y~~~d~~p~~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~~-G~rlPiv~g~ 98 (526)
+..|++|||||+++++++|+||+++|+++++++|+++ |+|+++ +++++|++|++|++. |.|+|+++|+
T Consensus 2 ~~~~~~~~~~p~~~~~~lglQhvl~m~~~~i~~Pli~----gl~~~~-------~l~~sGi~TliQ~~~~g~rlP~~~G~ 70 (428)
T PRK10720 2 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPILF----HINPAT-------VLLFNGIGTLLYLFICKGKIPAYLGS 70 (428)
T ss_pred CcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCHHH-------HHHHHHHHHHHHHHhccCccceEEeC
Confidence 4679999999999999999999999999999999985 888754 789999999999976 4699999999
Q ss_pred hhhhHHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhh--h-hhhHhhhcCcccHHHHHHHHHHHh
Q 009755 99 SFAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQ--V-WGLFSRFFSPLGIAPVVGLVGLGL 175 (526)
Q Consensus 99 sfa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g--~-~~~l~~~fPp~V~G~~i~lIGl~l 175 (526)
||+|++++..+.. ++|++++|+++++|+++++++++. . ++|++|+|||.|+|.++++||+++
T Consensus 71 sfa~i~~~~~~~~---------------~~~~~~lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L 135 (428)
T PRK10720 71 SFAFISPVLLLLP---------------LGYEVALGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLEL 135 (428)
T ss_pred cHHHHHHHHHHHH---------------ccHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHh
Confidence 9999998877642 369999999999999999999872 1 578999999999999999999999
Q ss_pred HHhhhccccc-----------chhhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCC
Q 009755 176 FQRGFPLLGN-----------CVEIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGK 244 (526)
Q Consensus 176 ~~~~~~~~~~-----------~~~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~ 244 (526)
.+.++++.+. ++.+++++++++++++++.|+ ++|++++++|+++||++++.+|.
T Consensus 136 ~~~~~~~~g~~~~~~~~~~~~~~~lalv~l~iil~~~~~~kg--------~~~~~~iLigIvvG~ila~~lG~------- 200 (428)
T PRK10720 136 AGVAAGMAGLLPAEGQTPDSKTIIISMVTLAVTVLGSVLFRG--------FLAIIPILIGVLVGYALSFAMGM------- 200 (428)
T ss_pred HHHHHhhccccCCCCcccchHHHHHHHHHHHHHHHHHHHhcc--------HHHHhHHHHHHHHHHHHHHHhcC-------
Confidence 9998865431 345677777776666666654 47999999999999999998864
Q ss_pred CCccccccccCccCcCCCCCccccCccccccCCcccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchh
Q 009755 245 PYTTQISCRTDRANLISTAPWFKFPYPLQWGPPTFSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIG 324 (526)
Q Consensus 245 ~~~~~~~~~~d~~~~v~~a~~~~lP~~~~~g~P~F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~ 324 (526)
.|++. +.+++|+++|. |+.|+||+..++.+++.+++.++|++|++.++++..+++..++++.||++.
T Consensus 201 ---------~d~~~-v~~a~~~~lP~---~~~P~fd~~~il~l~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~ 267 (428)
T PRK10720 201 ---------VDTTP-IIEAHWFALPT---FYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMF 267 (428)
T ss_pred ---------CCHHH-hhcCccccCCC---CCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHh
Confidence 24443 66789999994 567899999999999999999999999999999988755435679999999
Q ss_pred hHhHHHHHhhhcCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHH
Q 009755 325 WQGIGILLDGLFGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVAS 404 (526)
Q Consensus 325 ~dGl~~ilaglfG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~ 404 (526)
+||++|+++|+||++|.|+|+ ||+|+++.||++||+++.++++++++++++||+++++++||.||+||+.+++|+++..
T Consensus 268 adGlatii~glfG~~p~tty~-en~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~ 346 (428)
T PRK10720 268 ANGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGA 346 (428)
T ss_pred hhhHHHHHHHhcCCCCccccc-cccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh--hccccCCCccEEeehhHHHhhhhhhhhhhcccCCCCCCcccccccchhHHHHHHhcchhHHHHHHHHHHhhc
Q 009755 405 VGLSFL--QFTNMNCMRNLVITGLSLFLGISIPQFFNEYWNPQHHGLVHTNAGWFNAFLNTIFSSPPTVGLIVAVFLDNT 482 (526)
Q Consensus 405 ~Gi~~l--~~v~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~~gi~~g~l~ai~Ln~~ 482 (526)
+|+|.+ +++|++++||.+|+|+|+.+|++.... + ++.++.+|+..|+++|++||++
T Consensus 347 ~Gi~~l~~~~~~~~~~~n~~i~~~~l~~g~~~~~~--------------------~--~~~~~~~gi~~g~~~ai~Lnll 404 (428)
T PRK10720 347 SGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKV--------------------N--IGAAELKGMALATIVGIGLSLI 404 (428)
T ss_pred HHHHHHHHccCCCCcccchhHHHHHHHHHHHHHHH--------------------H--HHHHhcCcHHHHHHHHHHHHHH
Confidence 999999 789998888999999999999986421 1 5778889999999999999999
Q ss_pred CCCCCcccccC
Q 009755 483 LEVEKSKKDRG 493 (526)
Q Consensus 483 ~~~~~~~~~~~ 493 (526)
+|.+ ||.|+
T Consensus 405 l~~~--~~~~~ 413 (428)
T PRK10720 405 FKLI--SKLRP 413 (428)
T ss_pred hccc--ccccC
Confidence 9943 44444
No 6
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=100.00 E-value=2.1e-65 Score=544.50 Aligned_cols=392 Identities=30% Similarity=0.483 Sum_probs=352.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHhCC---CcceEEechhhhHH
Q 009755 28 GFGKAETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQALFGT---RLPAVVGGSFAYVI 104 (526)
Q Consensus 28 ~~p~~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~~G~---rlPiv~g~sfa~i~ 104 (526)
|||+++++++|+||+++|+++++++|++++++. +|+||+.+++|++++++|++|++|++..+ |+|.++|+||++++
T Consensus 1 ~~~~~~~~~lglQh~l~~~~~~i~~p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~ 79 (415)
T TIGR00801 1 RPPFLQTLVLGLQHLLAMFGGTVLVPLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVS 79 (415)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHH
Confidence 689999999999999999999999999999999 99999999999999999999999997533 36999999999999
Q ss_pred HHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhh--h-hhhhHhhhcCcccHHHHHHHHHHHhHHhhhc
Q 009755 105 PIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYS--Q-VWGLFSRFFSPLGIAPVVGLVGLGLFQRGFP 181 (526)
Q Consensus 105 ~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~--g-~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~ 181 (526)
+...+..+ +++++++|+++++|+++++++++ + .++|++|+|||.|+|.++++||+++.+.+++
T Consensus 80 ~~~~~~~~--------------~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~ 145 (415)
T TIGR00801 80 PMIAIGSG--------------LGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVK 145 (415)
T ss_pred HHHHHHhc--------------cCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHH
Confidence 87766432 47999999999999999999985 3 3578899999999999999999999999988
Q ss_pred cccc--------------chhhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 009755 182 LLGN--------------CVEIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYT 247 (526)
Q Consensus 182 ~~~~--------------~~~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~ 247 (526)
+.+. ++.+++.++++++++.++.|+. +|++++++|+++||++++.+|.
T Consensus 146 ~~~g~~~~~~~~~~~~~~~~~vg~~~l~~~vl~~~~~~g~--------~~~~aiLigiv~g~i~a~~lg~---------- 207 (415)
T TIGR00801 146 MAAGGEAAMSSATYGSLENLGVAFVVLALIILLNRFGKGF--------LKSISILIGILVGYILALFMGI---------- 207 (415)
T ss_pred HhccCCCcccccccCchhhHHHHHHHHHHHHHHHHHHhhH--------HHHHHHHHHHHHHHHHHHHcCC----------
Confidence 7531 2456777777776666666544 7999999999999999998864
Q ss_pred cccccccCccCcCCCCCccccCccccccCCcccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHh
Q 009755 248 TQISCRTDRANLISTAPWFKFPYPLQWGPPTFSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQG 327 (526)
Q Consensus 248 ~~~~~~~d~~~~v~~a~~~~lP~~~~~g~P~F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dG 327 (526)
+|+++ +.++||+++|.+++|+ |+||+..+.+++++++++++|++|+++++++.+++++++++++||++.+||
T Consensus 208 ------~~~~~-v~~~~~~~lP~~~~~g-~~f~~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adG 279 (415)
T TIGR00801 208 ------VDFSP-VIDAPWFSLPTPFTFG-PSFEWPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADG 279 (415)
T ss_pred ------ccchh-hccCcccccCCccCCC-ceecHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhh
Confidence 34443 6678999999888888 799999999999999999999999999999998875544688999999999
Q ss_pred HHHHHhhhcCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHH
Q 009755 328 IGILLDGLFGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGL 407 (526)
Q Consensus 328 l~~ilaglfG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi 407 (526)
++|+++|+||++|.++|+ ||+|+++.||++||++.+.+|+++++++++||++++++.||.||+||+++++|+++..+|+
T Consensus 280 l~~i~aglfG~~p~t~~s-en~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi 358 (415)
T TIGR00801 280 LATLLAGLFGGFPNTTFA-QNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPSPVLGGASIVMFGMIAASGI 358 (415)
T ss_pred HHHHHHHhcCCCCCcchh-hhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccccCCCccEEeehhHHHhhhhh---hhhhhcccCCCCCCcccccccchhHHHHHHhcchhHHHHHHHHHHhhc
Q 009755 408 SFLQFTNMNCMRNLVITGLSLFLGISI---PQFFNEYWNPQHHGLVHTNAGWFNAFLNTIFSSPPTVGLIVAVFLDNT 482 (526)
Q Consensus 408 ~~l~~v~~~~~rn~~ivg~sl~~Gl~~---p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~~gi~~g~l~ai~Ln~~ 482 (526)
|.+.+.|+|++||++++|+|+.+|+++ |+++++ +| +++||+++|+++|++||++
T Consensus 359 ~~l~~~~~~~~r~~~i~~~s~~~g~~~~~~p~~~~~----------------~p-----~~~~g~~~g~~~ai~Ln~~ 415 (415)
T TIGR00801 359 RILIRNKLDNRRNRNIIAASVGLGLGVTGVPDIFGN----------------FP-----LLLSGIALAGIVAILLNLI 415 (415)
T ss_pred HHHHhCccCcccceehHHHHHHHHHHHhccHHHHhh----------------Cc-----hhcccHHHHHHHHHHHhcC
Confidence 999999998789999999999999997 877765 46 7899999999999999975
No 7
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=100.00 E-value=5.7e-65 Score=540.65 Aligned_cols=388 Identities=34% Similarity=0.535 Sum_probs=349.6
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHH----HhCCCcceEEechhhhHHHHHHHHhhc
Q 009755 38 AFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQA----LFGTRLPAVVGGSFAYVIPIAYIINDS 113 (526)
Q Consensus 38 GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~----~~G~rlPiv~g~sfa~i~~~~~i~~~~ 113 (526)
|+||+++|+++++++|++++++.|+|+||+.++++++++++|++|++|+ .+|+|+|+++|||++++++......+
T Consensus 1 ~~Qh~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~- 79 (406)
T TIGR03173 1 GLQHVLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAG- 79 (406)
T ss_pred CccchHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhh-
Confidence 6899999999999999999999999999999999999999999999998 46899999999999999887665432
Q ss_pred cccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhcccc---------
Q 009755 114 SLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPLLG--------- 184 (526)
Q Consensus 114 ~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~~~--------- 184 (526)
+++++++|+++++|++++++| +.++|++|+|||+++|.++++||+++.+.++++..
T Consensus 80 -------------~~~~~~~ga~~v~Gii~illg--~~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~~~~~ 144 (406)
T TIGR03173 80 -------------GGLGAIFGAVIVAGLFVILLA--PFFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGAPDFG 144 (406)
T ss_pred -------------hhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCccccc
Confidence 579999999999999999999 46799999999999999999999999998886542
Q ss_pred --cchhhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCccccccccCccCcCCC
Q 009755 185 --NCVEIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISCRTDRANLIST 262 (526)
Q Consensus 185 --~~~~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~~~d~~~~v~~ 262 (526)
.++.+++.++++++++.++.| +++|++++++++++||++++.+|. .|++. +.+
T Consensus 145 ~~~~~~l~l~~l~~~il~~~~~~--------~~~~~~aiLi~ivvg~iva~~~g~----------------~~~~~-i~~ 199 (406)
T TIGR03173 145 SPQNLGLALLTLVIILLLNRFGK--------GFLRSIAVLLGLVVGTIVAAALGM----------------VDFSG-VAE 199 (406)
T ss_pred chHHHHHHHHHHHHHHHHHHHhh--------hHHHHhHHHHHHHHHHHHHHHhcC----------------CCchh-hcc
Confidence 124566677666655555544 347899999999999999998864 24433 566
Q ss_pred CCccccCccccccCCcccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCC
Q 009755 263 APWFKFPYPLQWGPPTFSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGS 342 (526)
Q Consensus 263 a~~~~lP~~~~~g~P~F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~t 342 (526)
+||+++|.+++|+.|+||+..+.+++.+++++++|++|+++++++..+++ .+++++||++.+||++|+++|+||++|.|
T Consensus 200 ~~~~~~P~~~~~~~P~f~~~~~~~~~~~~lv~~~esig~~~a~~~~~g~~-~~~~~~~~~l~~~Gi~~i~aglfG~~p~t 278 (406)
T TIGR03173 200 APWFALPTPFHFGAPTFDLVAILTMIIVYLVSMVETTGDFLALGEITGRP-ITEKDLAGGLRADGLGSALGGLFNTFPYT 278 (406)
T ss_pred CCeeeCCCCCcCCCCeeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CCchhccchHHhccHHHHHHHHhCCCCCc
Confidence 89999998888999999999999999999999999999999999987754 35678999999999999999999999999
Q ss_pred cccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhhhccccCCCccEE
Q 009755 343 TVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGLSFLQFTNMNCMRNLV 422 (526)
Q Consensus 343 t~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l~~v~~~~~rn~~ 422 (526)
+|+ ||+|++..||++||++.+++|+++++++++||++++++.||.||+||+++++|+++..+|+|.+++.|+||+||.+
T Consensus 279 ~~~-~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l~~~~~i~~~g~~~l~~~~~~~~rn~~ 357 (406)
T TIGR03173 279 SFS-QNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGLVMFGMVAASGIRILSKVDFDRRRNLL 357 (406)
T ss_pred chh-hhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCcccCcceeh
Confidence 998 9999999999999999999999999999999999999999999999999999999999999999999999878999
Q ss_pred eehhHHHhhhhh---hhhhhcccCCCCCCcccccccchhHHHHHHhcchhHHHHHHHHHHhhcCC
Q 009755 423 ITGLSLFLGISI---PQFFNEYWNPQHHGLVHTNAGWFNAFLNTIFSSPPTVGLIVAVFLDNTLE 484 (526)
Q Consensus 423 ivg~sl~~Gl~~---p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~~gi~~g~l~ai~Ln~~~~ 484 (526)
|+|+++.+|++. |+++++ +|++++++++||+++|+++|++||+++|
T Consensus 358 i~g~~~~~g~~~~~~p~~~~~----------------~p~~~~~~~~~~~~~g~~~ai~l~~~~p 406 (406)
T TIGR03173 358 IVAVSLGLGLGPTVVPEFFSQ----------------LPAWAQTLFSSGIAVGAISAILLNLLFN 406 (406)
T ss_pred hhHHHHHHHHHHHhhHHHHHH----------------ChHHHHHHHhCcHHHHHHHHHHHHhhcC
Confidence 999999999974 888887 6999999999999999999999999986
No 8
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=100.00 E-value=5.3e-61 Score=507.44 Aligned_cols=371 Identities=35% Similarity=0.566 Sum_probs=281.7
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHH-hCCCcceEEechhhhHHHHHHHH
Q 009755 32 AETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQAL-FGTRLPAVVGGSFAYVIPIAYII 110 (526)
Q Consensus 32 ~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~-~G~rlPiv~g~sfa~i~~~~~i~ 110 (526)
+|++++|+||+++|+++++++|.++++++|+ ++++.++++++++++|++|++|++ +|+|+|+++|+|+.+++......
T Consensus 1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~-~~~~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~~~~~~~ 79 (389)
T PF00860_consen 1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGL-DADTAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIFAFMIVI 79 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTS------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHGGG
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHhhcccc-cchhhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhhhhhccc
Confidence 5899999999999999999999999998899 778889999999999999999999 89999999999999997332221
Q ss_pred hhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhcccccch---
Q 009755 111 NDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPLLGNCV--- 187 (526)
Q Consensus 111 ~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~~~~~~--- 187 (526)
... .+++++++.++|+++++|++++++++++.++|++|+|||.|.|.++++||+++.+.++++.+.++
T Consensus 80 g~~---------~~~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~ 150 (389)
T PF00860_consen 80 GMA---------ESGGYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNP 150 (389)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---B
T ss_pred ccc---------cchhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhccccccccc
Confidence 100 12347899999999999999999999999999999999999999999999999999998764322
Q ss_pred -----------hhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCccccccccCc
Q 009755 188 -----------EIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISCRTDR 256 (526)
Q Consensus 188 -----------~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~~~d~ 256 (526)
..+..+++..+.++.+. ++++|++++++|+++||++++.++.. |+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ailigi~~g~i~~~~~g~~----------------~~ 206 (389)
T PF00860_consen 151 DGLLVGDGKNLGLAVLTLLFILLLSLFL--------KGFLRKGAILIGIIAGWIVAAILGVV----------------DF 206 (389)
T ss_dssp TT-B---HHHHHHHHHHHHHHHHHHHSS--------STTTTTHHHHHHHHHHHHHHHHHHHT----------------TS
T ss_pred cccccccccccccccccchhhhhhhhhh--------hhhcccccchhhhhhhhhhhhccccc----------------cc
Confidence 23444444444444444 44579999999999999999999853 44
Q ss_pred cCcCCCCCccccCccccccCCcccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhc
Q 009755 257 ANLISTAPWFKFPYPLQWGPPTFSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLF 336 (526)
Q Consensus 257 ~~~v~~a~~~~lP~~~~~g~P~F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglf 336 (526)
++.+.++||+++|.+++|++|+|++.++++++..+++.++|++||+.++++..+++++++++++|++.+||++|+++|+|
T Consensus 207 ~~~~~~~~~~~~p~~~~~g~p~f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~ 286 (389)
T PF00860_consen 207 SPSVSSAPWFSLPSPFPFGWPSFDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLF 286 (389)
T ss_dssp SH-HHHS-SS--------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccccccccccccccccccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhh
Confidence 32256789999999999999999999999999999999999999999999999977766899999999999999999999
Q ss_pred CCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhhhccccC
Q 009755 337 GTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGLSFLQFTNMN 416 (526)
Q Consensus 337 G~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l~~v~~~ 416 (526)
|++|.|+|+ ||+|.++.||++|||++..+++++++++++||+++++++||.||++|++++++|+++.+|+|++++.|+|
T Consensus 287 G~~~~t~~~-en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~~ 365 (389)
T PF00860_consen 287 GTSPTTTYS-ENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRNIDWVDLD 365 (389)
T ss_dssp T---EEE-H-HHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS-
T ss_pred cCCCCcccc-ccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHhHhheecccC
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEeehhHHHhhhhhhhh
Q 009755 417 CMRNLVITGLSLFLGISIPQF 437 (526)
Q Consensus 417 ~~rn~~ivg~sl~~Gl~~p~~ 437 (526)
|+||.+++++++.+|++++.+
T Consensus 366 ~~r~~~iv~~~l~~g~~i~~~ 386 (389)
T PF00860_consen 366 SARNAFIVGLSLPLGLSIAFG 386 (389)
T ss_dssp SHHHHHHHHHHHHHHHH----
T ss_pred ccccHHHHHHhHHHHHHHhcc
Confidence 899999999999999988644
No 9
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=99.97 E-value=6.6e-29 Score=259.30 Aligned_cols=383 Identities=17% Similarity=0.181 Sum_probs=282.7
Q ss_pred ccccccccCCCC-CHHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEE
Q 009755 18 FQVFQMFLSAGF-GKAETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVV 96 (526)
Q Consensus 18 ~~~~~y~~~d~~-p~~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~ 96 (526)
.-|.+|+++|+. ..++|+++|++++++|.+...++|.+++++ |.| ...+..+++++++++|++++++ +|+|+.+
T Consensus 5 ~~~~~F~l~~~~t~vrtEiiAGlTTFltM~YIl~VnP~IL~~a-g~~---~~av~~AT~l~a~~gs~~mgl~-An~P~al 79 (436)
T COG2252 5 DLDRFFKLKEHGTTVRTEVIAGLTTFLTMAYIVFVNPQILGAA-GMP---VGAVFVATCLAAAIGSIAMGLY-ANLPIAL 79 (436)
T ss_pred HHHHHhCccccCchHHHHHHHHHHHHHHHHHhheecHHHHHhc-CCC---chhHHHHHHHHHHHHHHHHHHH-HcCchhh
Confidence 346678899987 499999999999999999999999999874 677 4778899999999999999998 9999999
Q ss_pred ech---hhhHHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcc-------cHHH
Q 009755 97 GGS---FAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPL-------GIAP 166 (526)
Q Consensus 97 g~s---fa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~-------V~G~ 166 (526)
+|. -+|.. .+++..++ ..||+++++++++|+++++++++|.++|++|.+|.. .+|.
T Consensus 80 apgmglnAfFa--ftvv~~~g------------i~wq~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIGl 145 (436)
T COG2252 80 APGMGLNAFFA--FTVVLGMG------------LSWQVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIGL 145 (436)
T ss_pred cchhhHHHHHH--HHHHHhcC------------CcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 994 23332 22333332 469999999999999999999999999999999974 4677
Q ss_pred HHHHHHHHhHHhhhcc------cc---c-chhhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHH
Q 009755 167 VVGLVGLGLFQRGFPL------LG---N-CVEIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILT 236 (526)
Q Consensus 167 ~i~lIGl~l~~~~~~~------~~---~-~~~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg 236 (526)
++.+||+........+ .+ + ...++++++++++.+ +.||. ..+++++++..+++++++|
T Consensus 146 Fia~IgL~~~Givv~~~~tlv~LG~~~~p~vll~i~G~~l~~~L--~~~~i----------~Gaili~i~~~t~~g~~~g 213 (436)
T COG2252 146 FIALIGLKNAGIVVANPATLVALGDFTSPGVLLAILGLLLIIVL--VSRKI----------KGAILIGILVTTILGIILG 213 (436)
T ss_pred HHHHHHHhhCCeEEecCcceEEeecCCCchHHHHHHHHHHHHHH--HHhhc----------cHhhhHHHHHHHHHHHHhc
Confidence 7777776533332211 11 1 233455566555554 44443 6789999999999999887
Q ss_pred hhcCCCCCCCccccccccCccCcCCCCCccccCccccccCC--cccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCC
Q 009755 237 ASGAYRGKPYTTQISCRTDRANLISTAPWFKFPYPLQWGPP--TFSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPP 314 (526)
Q Consensus 237 ~~g~~~~~~~~~~~~~~~d~~~~v~~a~~~~lP~~~~~g~P--~F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~ 314 (526)
.... . .+.....|... |...+.... ...+..+...+...++..+|++|++.++++.++..++
T Consensus 214 ~~~~--~-------------~~~~~~~p~~~-~~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~ 277 (436)
T COG2252 214 IDVH--F-------------GGLVGAPPSLS-PIFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDK 277 (436)
T ss_pred cccc--c-------------cccccCCCCcc-chhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCC
Confidence 4210 0 00001001000 111111111 1124556677889999999999999999998875432
Q ss_pred --CCcCCCcchhhHhHHHHHhhhcCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHH
Q 009755 315 --PAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFA 392 (526)
Q Consensus 315 --~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlg 392 (526)
+.++.+|.+.+|++++++++++|+.|.|+|. |+...++..|.+.-.+..++.++++.+-+.| +...+|..+.+
T Consensus 278 ~g~~~~~~~al~~D~v~t~~ga~~GtS~~t~yI-ESaaGva~GgrTGltavv~g~lFl~~lf~~P----l~~~vP~~Ata 352 (436)
T COG2252 278 NGKMPRIGKALLADSVATVVGALFGTSTVTAYI-ESAAGVAAGGRTGLTAVVTGLLFLLSLFFSP----LAALVPGYATA 352 (436)
T ss_pred CCCccccchHHHHhHHHHHHHHhcCCcchhhhh-hcccccccccccccHHHHHHHHHHHHHHHHH----HHHhCcHhhhh
Confidence 2468999999999999999999999999999 9998887777666667777777777765555 89999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCccEEeehhHHHhhhhhhhhhhcccCCCCCCcccccccchhHHHHHHhcchhHHH
Q 009755 393 ALYCVLFGLVASVGLSFLQFTNMNCMRNLVITGLSLFLGISIPQFFNEYWNPQHHGLVHTNAGWFNAFLNTIFSSPPTVG 472 (526)
Q Consensus 393 g~ll~~fg~i~~~Gi~~l~~v~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~~gi~~g 472 (526)
+++++. |.++ ++.++++||+|..+ .+|.++... .+| +++...+|++.|
T Consensus 353 paLi~v-G~lM---~~~v~~id~~d~~e------------a~PaF~tiv--------------~mp--lTySIa~Gia~G 400 (436)
T COG2252 353 PALIIV-GALM---LSSVKQIDWSDFTE------------AVPAFLTIV--------------MMP--LTYSIADGIAFG 400 (436)
T ss_pred HHHHHH-HHHH---HhhhccCCchhhhh------------hhHHHHHHH--------------HHH--HHHHHHhhHHHH
Confidence 999875 4444 46777899987555 347766654 245 788899999999
Q ss_pred HHHHHHHhhcCC
Q 009755 473 LIVAVFLDNTLE 484 (526)
Q Consensus 473 ~l~ai~Ln~~~~ 484 (526)
.+++.+++....
T Consensus 401 fi~y~i~k~~~g 412 (436)
T COG2252 401 FISYVILKVFTG 412 (436)
T ss_pred HHHHHHHHHHhh
Confidence 999999998654
No 10
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.94 E-value=1.3e-24 Score=226.51 Aligned_cols=314 Identities=17% Similarity=0.187 Sum_probs=232.6
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHHHHhh
Q 009755 33 ETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAYIIND 112 (526)
Q Consensus 33 ~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~i~~~ 112 (526)
..+..|+-.++.-+++.+++-+..+++.|+|++|+++|+++.++.+|++|++|++. +|+|+++++| ..+.++.+...
T Consensus 22 s~~~aG~va~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti~lS~~-~r~Pi~~awS--tPGaAll~~~~ 98 (395)
T TIGR00843 22 PTLIAGFLAVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGIFLSIR-FKTPVLTAWS--APGAALLVTGF 98 (395)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCeeeecC--chHHHHHHHhc
Confidence 57889999999999999888888888899999999999999999999999999986 7999999998 22222222211
Q ss_pred ccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhcccccchhhHHH
Q 009755 113 SSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPLLGNCVEIGIP 192 (526)
Q Consensus 113 ~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~~~~~~~v~~~ 192 (526)
.+ .+++++.|+.+++|++.+++|++|+++|++|++|+.+.+.++..+.+...-..++...+.+.++..
T Consensus 99 ~~------------~~~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f~l~~~~a~~~~pll~~~ 166 (395)
T TIGR00843 99 PG------------ISLNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQFGLGAFAALDGLFLICFS 166 (395)
T ss_pred CC------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 11 479999999999999999999999999999999999999998755444322222233334444322
Q ss_pred HHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCccccccccCccCcCCCCCccccCccc
Q 009755 193 MLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISCRTDRANLISTAPWFKFPYPL 272 (526)
Q Consensus 193 ~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~~~d~~~~v~~a~~~~lP~~~ 272 (526)
.++.. ...| ++.+++++++++++|.++++..|.. |.++ +. .+ +..|
T Consensus 167 mll~~----l~~~--------r~~Pr~avl~aLlvG~iva~~~G~~----------------~~~~-~~-~~-l~~p--- 212 (395)
T TIGR00843 167 MLLCW----LASK--------AFAPRYAMIAALICGIAFSFALGDM----------------NPTD-LD-FK-IALP--- 212 (395)
T ss_pred HHHHH----HHHH--------HhcchHHHHHHHHHHHHHHHHhcCC----------------Cccc-cc-cc-cccc---
Confidence 22111 1223 3357899999999999999877632 1111 11 01 1223
Q ss_pred cccCCcccHHHHHHH-HHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccchhh
Q 009755 273 QWGPPTFSAGHSFAM-MSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVENVGL 351 (526)
Q Consensus 273 ~~g~P~F~~~~i~~~-~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g~ 351 (526)
.|..|+||+...+.. ++.+++.+....-.-.++.|.++++ .+.|+-+.++|++|++++.||+.+ -|.+.
T Consensus 213 ~~~~P~fs~~a~~~l~lPl~~vtm~~qnlpgiavl~aaGy~----~p~~~~~~~tGl~sll~ApfGg~~------~nlaa 282 (395)
T TIGR00843 213 QFIAPDFSFAHSLNLALPLFLVSLAGQFAPGIAALKAAGYN----APAKPIIAAAGLAALFAAFAGGIS------IGIAA 282 (395)
T ss_pred eeeCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHcCCC----CCchHHHHHHHHHHHHHhccCCch------hhhhH
Confidence 566789998877766 6788888876654445666766654 346899999999999999999997 34433
Q ss_pred hhhccc---------Ccch-HHHHHHHHHHHHHhh-hHHHHHHHhCChhHHHH-HHHHHHHHHHHH
Q 009755 352 LGLTRV---------GSRR-VVQISAGFMIFFSCL-GKFGAVFASIPIPIFAA-LYCVLFGLVASV 405 (526)
Q Consensus 352 i~~Tg~---------~SR~-~~~~~g~~lillgl~-pk~~al~a~IP~~Vlgg-~ll~~fg~i~~~ 405 (526)
|..+=| ..|| +.+.+|++++++|++ +.+..+++.+|.+.+.. +.+.+++.+..+
T Consensus 283 itaAic~G~~ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~laGlAll~~~~~~ 348 (395)
T TIGR00843 283 ITAAICMGKDAHEDKDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELIAALAGLALLGAIAGN 348 (395)
T ss_pred HhHHHhcCcccccCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 332222 3354 588899999999999 78999999999999998 577788887643
No 11
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.92 E-value=1.3e-22 Score=222.26 Aligned_cols=318 Identities=19% Similarity=0.224 Sum_probs=232.5
Q ss_pred HHHHHHHHHHHHHHHHhhHhHHHHHHHH--hcCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHH
Q 009755 31 KAETILLAFQNYILMLGTSVMIPTLLVH--AMGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAY 108 (526)
Q Consensus 31 ~~~~i~~GlQh~lam~~~~i~vPlil~~--a~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~ 108 (526)
++..+++|+.-.+ +++|.-++. +.|+|+ .+.++++-++.++-+++|.+--.+.||.-++......
T Consensus 21 l~~Dl~AGltva~------valP~ama~a~~aGv~p-------~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~ 87 (554)
T COG0659 21 LRGDLLAGLTVAA------VALPLAMAFAIAAGVPP-------EAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAA 87 (554)
T ss_pred hHHHHHHHHHHHH------HHhHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHH
Confidence 6789999997654 445655554 379997 8999999999999999987777899997666655555
Q ss_pred HHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhccc-c---
Q 009755 109 IINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPLL-G--- 184 (526)
Q Consensus 109 i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~~-~--- 184 (526)
+..... .++++.++-+++++|++++++|++|+ +++.+++|+.|+-.++..||+.++..+++.+ +
T Consensus 88 ~i~~~~-----------~~g~~~~~~~tllaGv~~i~~G~lRL-G~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~ 155 (554)
T COG0659 88 VIASLV-----------ETGLALAFLATLLAGVFQILLGLLRL-GRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLAS 155 (554)
T ss_pred HHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 554210 15899999999999999999999998 9999999977766688888887776555431 1
Q ss_pred ------------------cch---hhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCC
Q 009755 185 ------------------NCV---EIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRG 243 (526)
Q Consensus 185 ------------------~~~---~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~ 243 (526)
.+| .++..++++++ +.++.. .|.++.++++++++.+++.++... .
T Consensus 156 ~~~~~~~~~~~l~~~~~~~~~~~~~lg~~~l~il~----~~~~~~-------~~~P~~liaiv~~t~i~~~~~~~~---~ 221 (554)
T COG0659 156 KVSGFWAKVSALFTVLLTINLATLLLGLLTLAILL----FLPRLT-------PRIPSPLIALVLGTLIVWIFPLDS---L 221 (554)
T ss_pred cccchHHHHHHHHHhcccccHHHHHHHHHHHHHHH----Hccchh-------hhCCcHHHHHHHHHHHHHHhcCCc---h
Confidence 011 22333333332 233321 356678999999999988875421 0
Q ss_pred CCCccccccccCccCcCCCCCccccCcc-ccccCCcccH----HHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcC
Q 009755 244 KPYTTQISCRTDRANLISTAPWFKFPYP-LQWGPPTFSA----GHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYV 318 (526)
Q Consensus 244 ~~~~~~~~~~~d~~~~v~~a~~~~lP~~-~~~g~P~F~~----~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~ 318 (526)
+.+ +... ++|.. .+|+.|.+++ ..+...+.++++..+|++.+.++.+++.++ +.+
T Consensus 222 ---------~~G--~i~~-----~lp~~~~~~~~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~----~~d 281 (554)
T COG0659 222 ---------RYG--EIPG-----SLPSGLPHFRLPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT----KHD 281 (554)
T ss_pred ---------hcc--cCcc-----cCCcCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCC
Confidence 011 0011 12221 1445566654 445556789999999999999999888763 478
Q ss_pred CCcchhhHhHHHHHhhhcCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHH-
Q 009755 319 LSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCV- 397 (526)
Q Consensus 319 ~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~- 397 (526)
.||++.++|++|+.+|+||++|.+... .+......+|.+||.++++++++++++-++ ++.++..||.+++++++++
T Consensus 282 ~nrELiaqGiaNi~sglfgg~p~~g~~-srS~~nv~sGarT~lsgi~~a~~lll~l~~--~~~~~~~IP~a~Laavli~v 358 (554)
T COG0659 282 SNRELIAQGIANIASGLFGGIPATGSI-SRSAINIKSGARTRLSGIIHAALLLLLLLF--LAPLVSYIPLAALAAVLILV 358 (554)
T ss_pred CCHHHHHhhHHHHHHHHhCCccccchh-HHHHHHHHhCCcChHHHHHHHHHHHHHHHH--HHHHHHhCcHHHHHHHHHHH
Confidence 899999999999999999999999998 666666679999999999999887666554 6789999999999998775
Q ss_pred HHHHHHHHHHHhh
Q 009755 398 LFGLVASVGLSFL 410 (526)
Q Consensus 398 ~fg~i~~~Gi~~l 410 (526)
.++++-...++.+
T Consensus 359 ~~~l~~~~~~~~~ 371 (554)
T COG0659 359 GWGLLDWSLLKPL 371 (554)
T ss_pred HHHhccHHHHHHH
Confidence 4666665555543
No 12
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.91 E-value=1.1e-21 Score=201.39 Aligned_cols=310 Identities=20% Similarity=0.237 Sum_probs=236.9
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHHHHhh
Q 009755 33 ETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAYIIND 112 (526)
Q Consensus 33 ~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~i~~~ 112 (526)
.++..|+-.++.-+.+.+++-+-.+++.|++++|+..|+.+..+.+|+.|+..++. +|+|++.+.|- .+.++.+...
T Consensus 6 s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s~~q~~SWl~al~~~~Gl~~i~lSl~-yR~Pi~~AWSt--PGaAlL~~~~ 82 (378)
T PF03594_consen 6 SAVSAGFVAVLVGYTGPVAIVLQAAQAAGASPAQIASWLFALYLGMGLTSILLSLR-YRMPIVTAWST--PGAALLATSL 82 (378)
T ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCchhhcch--HHHHHHHHhc
Confidence 57889999999999999888888888899999999999999999999999999985 99999888763 3333323221
Q ss_pred ccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhcc---cccchhh
Q 009755 113 SSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPL---LGNCVEI 189 (526)
Q Consensus 113 ~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~---~~~~~~v 189 (526)
.+ ++++++.|+.+++|++.++.|++|+++|+.|.+|+.+...++..+ +++.+++. ...++.+
T Consensus 83 ~~------------~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGv---Ll~f~l~~f~a~~~~P~l 147 (378)
T PF03594_consen 83 PG------------YSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGV---LLPFGLAAFTALQADPLL 147 (378)
T ss_pred cC------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH---HHHHHHHHHHHHHhHHHH
Confidence 12 579999999999999999999999999999999998888887644 55555543 3345555
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCccccccccCccCcCCCCCccccC
Q 009755 190 GIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISCRTDRANLISTAPWFKFP 269 (526)
Q Consensus 190 ~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~~~d~~~~v~~a~~~~lP 269 (526)
....++.-++. |++ .++++++.++++|.+++...+.. +... .+ ..++
T Consensus 148 ~~~ml~~~l~~----~r~--------~pr~av~~al~~g~~~a~~~g~~----------------~~~~----~~-~~~~ 194 (378)
T PF03594_consen 148 VGPMLAVFLLA----RRF--------SPRYAVLAALVAGVAVAALTGQL----------------HPSA----LQ-LSLA 194 (378)
T ss_pred HHHHHHHHHHH----HHH--------cchhHHHHHHHHHHHHHHhcCCC----------------Cccc----cc-cccc
Confidence 55444433322 332 46789999999999988765432 1111 11 1233
Q ss_pred ccccccCCcccHHHHHHH-HHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccc
Q 009755 270 YPLQWGPPTFSAGHSFAM-MSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVEN 348 (526)
Q Consensus 270 ~~~~~g~P~F~~~~i~~~-~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n 348 (526)
.| .|-.|+||+..++.+ ++++++++......-.++-|..++ +.+.|+-+...|+++++.+.||+.+ .|
T Consensus 195 ~p-~~~~P~Fs~~a~v~lalPL~ivtmasQnlpG~aVL~a~GY----~~p~~~~~~~tGl~s~l~ApfGg~~------~n 263 (378)
T PF03594_consen 195 HP-VFTTPEFSWSALVSLALPLFIVTMASQNLPGIAVLRAAGY----QPPVNPLITVTGLASLLAAPFGGHA------VN 263 (378)
T ss_pred ee-EEECCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHHcCC----CCCchHHHHHHHHHHHHHhhhchhh------hH
Confidence 22 567799999999888 689999998655555667676664 3577899999999999999999996 66
Q ss_pred hhhhhhccc---------Ccch-HHHHHHHHHHHHHhhh-HHHHHHHhCChhHHHH-HHHHHHHHHHH
Q 009755 349 VGLLGLTRV---------GSRR-VVQISAGFMIFFSCLG-KFGAVFASIPIPIFAA-LYCVLFGLVAS 404 (526)
Q Consensus 349 ~g~i~~Tg~---------~SR~-~~~~~g~~lillgl~p-k~~al~a~IP~~Vlgg-~ll~~fg~i~~ 404 (526)
.+.+...-| ..|| +.+.+|++++++|++. .+.+++...|.+.+.. +.+.+++.+..
T Consensus 264 lAaitaAIc~g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg~l~~ 331 (378)
T PF03594_consen 264 LAAITAAICAGPEAHPDPSRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALIAALAGLALLGTLGG 331 (378)
T ss_pred HHHHHHHHHcCCccCCCcccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 655543333 2366 5889999999999996 7999999999999988 56777787764
No 13
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.88 E-value=3.6e-20 Score=186.12 Aligned_cols=312 Identities=21% Similarity=0.243 Sum_probs=238.1
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHHHHhh
Q 009755 33 ETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAYIIND 112 (526)
Q Consensus 33 ~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~i~~~ 112 (526)
.++..|++.+++-+++.+++-+-.+++.|.+++|++.|+.+-.+.+|+.|+.-++. +|+|++.+.|--.. ++.+.+.
T Consensus 21 ~~l~ag~va~~vG~~~s~aii~~aa~a~gas~aq~aSwl~al~l~mGv~ti~Ls~~-yR~Pv~~aWSTPG~--all~asl 97 (402)
T COG3135 21 QTLLAGFVAVLVGYASSLAIIIQAAQAAGASPAQIASWLTALGLAMGVSTLTLSLR-YRVPVLTAWSTPGA--ALLVASL 97 (402)
T ss_pred hhhhhhhHHheeccCccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhh-hccceeeeecCccH--HHHHhcc
Confidence 68999999999999999888878788899999999999999999999999999985 99999998763322 2222211
Q ss_pred ccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhcc---cccchhh
Q 009755 113 SSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPL---LGNCVEI 189 (526)
Q Consensus 113 ~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~---~~~~~~v 189 (526)
.+ .++.++.|+.+++|.+.++.|.+|.++|+.+.+||.+...++..| +.+.+++. ...++.+
T Consensus 98 ~g------------~s~~eaVGAfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlAGI---LL~F~l~a~~a~~~~p~l 162 (402)
T COG3135 98 GG------------LSFAEAVGAFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLAGI---LLRFGLKAFKALPTQPLL 162 (402)
T ss_pred CC------------CCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHHHH---HHHHHHHHHhccCCChHH
Confidence 11 579999999999999999999999999999999998877776644 56666554 3456655
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCccccccccCccCcCCCCCccccC
Q 009755 190 GIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISCRTDRANLISTAPWFKFP 269 (526)
Q Consensus 190 ~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~~~d~~~~v~~a~~~~lP 269 (526)
.+..++.-++. |.+ -..++++..+++|.+++...|... . ....+-.+.|
T Consensus 163 ~lpmv~~~ll~----r~f--------~pr~aV~aalvvgv~va~~~G~~~---~----------------~~~~~~~~~p 211 (402)
T COG3135 163 VLPMVLAYLLA----RVF--------APRYAVIAALVVGVLVAALLGDLH---T----------------ALVALEISTP 211 (402)
T ss_pred HHHHHHHHHHH----HHc--------CchHHHHHHHHHHHHHHHHhCccc---c----------------cccccccCcc
Confidence 55544333222 332 368999999999999998876421 1 0112223334
Q ss_pred ccccccCCcccHHHHHHH-HHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccc
Q 009755 270 YPLQWGPPTFSAGHSFAM-MSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVEN 348 (526)
Q Consensus 270 ~~~~~g~P~F~~~~i~~~-~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n 348 (526)
.|-.|+||+.+++.+ ++++++.+...-..-.|+-|.++++ ++.+--+.+.|+.+++++.||+.. -|
T Consensus 212 ---~~v~P~Fs~~A~l~lalPL~lvtmasQN~pGiAvLka~gY~----pp~~pl~~~TGl~sll~ApfG~~t------~n 278 (402)
T COG3135 212 ---TWVTPEFSFAAMLSLALPLFLVTMASQNLPGIAVLKAAGYQ----PPPSPLIVATGLASLLSAPFGGHT------VN 278 (402)
T ss_pred ---eeeCCcccHHHHHHHhHHHHHHHHHhccCccceeehhcCCC----CCCchHHHHhHHHHHHhcccccce------ec
Confidence 677899999999988 6899999986655556666666543 456778999999999999999985 66
Q ss_pred hhhhhhcccCc---------ch-HHHHHHHHHHHHHhhh-HHHHHHHhCChhHHHH-HHHHHHHHHHHHH
Q 009755 349 VGLLGLTRVGS---------RR-VVQISAGFMIFFSCLG-KFGAVFASIPIPIFAA-LYCVLFGLVASVG 406 (526)
Q Consensus 349 ~g~i~~Tg~~S---------R~-~~~~~g~~lillgl~p-k~~al~a~IP~~Vlgg-~ll~~fg~i~~~G 406 (526)
.+.|...-|.+ || +..++|++.+++|+|. .+.+++...|.+.+.. +.+.+.+.+..+-
T Consensus 279 LaAItAAic~gpdaHpD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li~~lAGLALlg~~~~~l 348 (402)
T COG3135 279 LAAITAAICTGPDAHPDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLIAALAGLALLGTLGNSL 348 (402)
T ss_pred HHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHH
Confidence 66665544443 55 5889999999999996 7999999999998887 4666667665433
No 14
>PRK11660 putative transporter; Provisional
Probab=99.85 E-value=7.3e-19 Score=194.74 Aligned_cols=313 Identities=17% Similarity=0.144 Sum_probs=207.9
Q ss_pred CHHHHHHHHHHHHHHHHhhHhHHHHHHHHh--cCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHH
Q 009755 30 GKAETILLAFQNYILMLGTSVMIPTLLVHA--MGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIA 107 (526)
Q Consensus 30 p~~~~i~~GlQh~lam~~~~i~vPlil~~a--~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~ 107 (526)
.+...+++|+.-.+. .+|.-++.+ .|+++ +..++++.+++++-+++|+.--++.||+.+......
T Consensus 28 ~l~~D~iAGltv~~~------~iPq~mayA~lag~pp-------~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~ 94 (568)
T PRK11660 28 RFTRDLIAGITVGII------AIPLAMALAIASGVPP-------QYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILY 94 (568)
T ss_pred hhhHHHHHHHHHHHH------HHHHHHHHHHHcCCCh-------HHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHH
Confidence 467899999987654 455555543 79997 668999999999999998888899999765443322
Q ss_pred HHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhccc-c--
Q 009755 108 YIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPLL-G-- 184 (526)
Q Consensus 108 ~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~~-~-- 184 (526)
.+..+ .+++.+..+.+++|++++++|++|+ +++.+++|..|+..++..+|+.++..+++.. |
T Consensus 95 ~~~~~--------------~~~~~~~~~~~l~Gii~~l~gllrl-G~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~ 159 (568)
T PRK11660 95 PVSQQ--------------FGLAGLLVATLMSGIILILMGLARL-GRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQ 159 (568)
T ss_pred HHHHH--------------hhHHHHHHHHHHHHHHHHHHHHHhh-hHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 22222 3566677789999999999999997 9999999987777788877876554443221 1
Q ss_pred ---------------------cch---hhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcC
Q 009755 185 ---------------------NCV---EIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGA 240 (526)
Q Consensus 185 ---------------------~~~---~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~ 240 (526)
.+| .+++.+++++++ .+++. .|....++++++++++++.++..+
T Consensus 160 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~l~lll~----~~~~~-------~~iP~~li~iiv~t~~~~~~~~~~- 227 (568)
T PRK11660 160 MAHVPEHYLEKVGALFQALPTINWGDALIGIVTLGVLIL----WPRLK-------IRLPGHLPALLAGTAVMGVLNLLG- 227 (568)
T ss_pred CCCCCccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHH----HHhhc-------ccCchHHHHHHHHHHHHHHHhccC-
Confidence 012 133333333322 23321 244566889999999888776421
Q ss_pred CCCCCCccccccccC--ccCcC--CCCCccccCccc-cccCC-----------cccHHH----HHHHHHHHHHHHhhhhh
Q 009755 241 YRGKPYTTQISCRTD--RANLI--STAPWFKFPYPL-QWGPP-----------TFSAGH----SFAMMSAVLVSMVESTG 300 (526)
Q Consensus 241 ~~~~~~~~~~~~~~d--~~~~v--~~a~~~~lP~~~-~~g~P-----------~F~~~~----i~~~~~~~lv~~~esig 300 (526)
.+.+ .+. +...+ .... ..+|..+ ++..| .++|+. +...+.++++..+|++.
T Consensus 228 ~~v~--------~vg~~~~~~~~~g~~~-~~ip~~~p~~~~p~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~ 298 (568)
T PRK11660 228 GHVA--------TIGSRFHYVLADGSQG-NGIPPLLPQFVLPWNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLL 298 (568)
T ss_pred CCce--------eecccccccccccccc-cCCCCCCCCCCCCccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000 00000 0000 0112100 11112 135544 44456788899999998
Q ss_pred HHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHH
Q 009755 301 AYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFG 380 (526)
Q Consensus 301 ~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~ 380 (526)
..++.++..++ +.+.||++.++|++|+++|+||++|.+++. ....+...+|.++|.+.+++++++++.-++ ++
T Consensus 299 ~~~~~~~~~~~----~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~-srSa~n~~aGarT~la~iv~a~~~ll~ll~--l~ 371 (568)
T PRK11660 299 CAVVLDGMTGT----KHSANSELVGQGLGNIVAPFFGGITATAAI-ARSAANVRAGATSPISAVIHALLVLLALLV--LA 371 (568)
T ss_pred HHHHHHHhcCC----CCCCcHHHHHHhHHHHHHHHhCcccccchH-HHHHHHHhcCCCcHHHHHHHHHHHHHHHHH--HH
Confidence 77777776543 457899999999999999999999999986 444566679999999988888766544322 44
Q ss_pred HHHHhCChhHHHHHHHHH
Q 009755 381 AVFASIPIPIFAALYCVL 398 (526)
Q Consensus 381 al~a~IP~~Vlgg~ll~~ 398 (526)
.++..||.+++++++++.
T Consensus 372 ~ll~~iP~~vLa~ili~~ 389 (568)
T PRK11660 372 PLLSYLPLSAMAALLLMV 389 (568)
T ss_pred HHHHhCcHHHHHHHHHHH
Confidence 599999999999988863
No 15
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.85 E-value=1.2e-18 Score=192.92 Aligned_cols=319 Identities=17% Similarity=0.190 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHHHHhhHhHHHHHHHHh--cCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHH
Q 009755 31 KAETILLAFQNYILMLGTSVMIPTLLVHA--MGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAY 108 (526)
Q Consensus 31 ~~~~i~~GlQh~lam~~~~i~vPlil~~a--~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~ 108 (526)
+...+++|+.-.+ +.+|.-++.+ .|+++ ...++++.+..++-+++|+.--++.||..+.-.....
T Consensus 14 l~~Di~aGltv~~------~~iP~~~ayA~laglpp-------~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~ 80 (563)
T TIGR00815 14 FKGDLMAGLTVGI------LLIPQAMAYAILAGLSP-------IYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGS 80 (563)
T ss_pred hhhHHHHHHHHHH------HHHHHHHHHHHHcCCCc-------hhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHH
Confidence 6789999997654 4456555543 79997 7789999999999999998888999996544433333
Q ss_pred HHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhccc-----
Q 009755 109 IINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPLL----- 183 (526)
Q Consensus 109 i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~~----- 183 (526)
+..+++.... ++ ......+....+++|++++++|++|+ +++.+++|..|+..++..+|+.++..+++.+
T Consensus 81 ~v~~~~~~~~--~~---~~~~~~a~~l~~l~Gi~~~~~g~lrl-G~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~ 154 (563)
T TIGR00815 81 VIARVGLQYL--FD---CDAIRLAFTLTLLAGIFQVILGLLRL-GFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISI 154 (563)
T ss_pred HHHHhcCCCC--cc---cHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4433321111 00 02356667889999999999999997 9999999988877788888887664433221
Q ss_pred ------------------c-c---chh---hHHHHHHHHHHHHHhhhccCCCCCCCc-cchhhHHHHHHHHHHHHHHHHh
Q 009755 184 ------------------G-N---CVE---IGIPMLLLVIGLSQYLKHVRPFRDLPI-FERFPVLISVTIIWIYSVILTA 237 (526)
Q Consensus 184 ------------------~-~---~~~---v~~~~l~~ii~l~~~~~~~~~~~~~~~-~r~~~vLigiivG~l~a~~lg~ 237 (526)
. . ||. ++..+++++. ..|++.+..++++ ......++.+++++++...+..
T Consensus 155 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~l~----~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~~ 230 (563)
T TIGR00815 155 FNTRTDTLGVVISTWAGLPNTHNWNWCTLVIGLVLLLFLL----YTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLH 230 (563)
T ss_pred CCCCCChHHHHHHHHHHhhhccccchHHHHHHHHHHHHHH----HHHHhhhhccchhcccccHHHHHHHHHHHHHHHHcc
Confidence 0 0 222 2222222222 2232210011111 1234678888888887665532
Q ss_pred hcCCCCCCCccccccccCccCcCCCCCccccCccccccCCcccHH----HHHHHHHHHHHHHhhhhhHHHHHHhhhcCCC
Q 009755 238 SGAYRGKPYTTQISCRTDRANLISTAPWFKFPYPLQWGPPTFSAG----HSFAMMSAVLVSMVESTGAYKAASRLAIATP 313 (526)
Q Consensus 238 ~g~~~~~~~~~~~~~~~d~~~~v~~a~~~~lP~~~~~g~P~F~~~----~i~~~~~~~lv~~~esig~~~av~~~~~~~~ 313 (526)
. .++ +.. +.+.|- .+| .+..|.+|+. .+...+.+++++++|++...++.++..++
T Consensus 231 ~-~~~-----------~~~---~g~ip~-g~p---~~~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~-- 289 (563)
T TIGR00815 231 K-KQG-----------VSI---LGHIPS-GLS---FFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGY-- 289 (563)
T ss_pred C-CCC-----------eEE---EeecCC-CCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 1 000 111 111111 122 2334556654 34445789999999999999888876543
Q ss_pred CCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHH
Q 009755 314 PPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAA 393 (526)
Q Consensus 314 ~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg 393 (526)
+.+.||++.++|++|+++|+||++|.+... ....+...+|.++|.+.++++++++++.++ ++.++..+|.+++++
T Consensus 290 --~~d~n~El~a~G~~N~~~~~fg~~p~~~s~-srs~~~~~~G~~t~~a~i~~~~~~l~~~l~--~~~~l~~iP~~~la~ 364 (563)
T TIGR00815 290 --KIDANQELVAQGIANIVGSFFSCYPATGSL-SRTAVNAKAGCRTQLSGVVTAIVVLLVLLV--LTPLFYYIPQAALAA 364 (563)
T ss_pred --CCCCcHHHHHhhHHHHHHHHhCccCCCCcc-hHHHHHHhcCCcchHHHHHHHHHHHHHHHH--HHHHHHhChHHHHHH
Confidence 467899999999999999999999999887 556666789999999999999887776555 567999999999999
Q ss_pred HHHHH
Q 009755 394 LYCVL 398 (526)
Q Consensus 394 ~ll~~ 398 (526)
++++.
T Consensus 365 ili~~ 369 (563)
T TIGR00815 365 IIISA 369 (563)
T ss_pred HHHHH
Confidence 98863
No 16
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.53 E-value=4.9e-14 Score=142.64 Aligned_cols=241 Identities=19% Similarity=0.166 Sum_probs=154.9
Q ss_pred HhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhcccc-----------------------c--chh---hHHHHHHHH
Q 009755 146 LGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPLLG-----------------------N--CVE---IGIPMLLLV 197 (526)
Q Consensus 146 lg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~~~-----------------------~--~~~---v~~~~l~~i 197 (526)
+|++|+ +++.+++|..|+..++..+|+.++..+++.+- + +|. ++..+++++
T Consensus 1 lGllrl-G~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 79 (280)
T PF00916_consen 1 LGLLRL-GFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLFSFIRALFQLISTITNWPTLAIGLVALVFL 79 (280)
T ss_pred Cccccc-cHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhhhhhccchhhhhhhhHHHHHH
Confidence 467786 99999999888888888888877665553210 0 111 111222222
Q ss_pred HHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCccccccccCccCcCC-CCCccccCccccccC
Q 009755 198 IGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISCRTDRANLIS-TAPWFKFPYPLQWGP 276 (526)
Q Consensus 198 i~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~~~d~~~~v~-~a~~~~lP~~~~~g~ 276 (526)
.+.++.++. ...+...+....++.++++.++++.+.... . .++..+.+. ..|.+.+|. .
T Consensus 80 -~~~~~~~~~--~~~~~~~~~p~~li~vv~~~~~~~~~~~~~-~-----------~v~~~~~i~~~lp~~~~p~-~---- 139 (280)
T PF00916_consen 80 -LIIRLLPKR--LPSRFWPPIPAPLIVVVLGTLLSWLFLLDK-Y-----------GVAIVGEIPSGLPPPSLPS-F---- 139 (280)
T ss_pred -hhhhhhhhh--ccccccccccccceeeehhhhhhhhhhhcc-c-----------cccccccccccCccccCcc-c----
Confidence 111222211 011222344567888888888776653210 0 011111111 123333332 0
Q ss_pred CcccH----HHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccchhhh
Q 009755 277 PTFSA----GHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLL 352 (526)
Q Consensus 277 P~F~~----~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i 352 (526)
.+++ ..+...+.+++++.+|++.+.+++++..+ ++.+.||++.++|++|+++|+||++|.+... .+..+.
T Consensus 140 -~~~~~~~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~~----~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~-srs~~~ 213 (280)
T PF00916_consen 140 -DISWSLILDLLPTALAIAIVGFIESLLIAKSIAKKTG----YRIDPNQELIALGLANIVSGLFGGMPGSGSF-SRSAVN 213 (280)
T ss_pred -ccccccccccchhHHHHHHHHHHHHHHhhhhhccccc----ccCCcHHHHHHhhhccccchhhccccccccc-ccchHH
Confidence 3333 34455678999999999998888776554 3458899999999999999999999998888 666666
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHH-HHHHHHHHHHHhhhcccc
Q 009755 353 GLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCV-LFGLVASVGLSFLQFTNM 415 (526)
Q Consensus 353 ~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~-~fg~i~~~Gi~~l~~v~~ 415 (526)
..+|.+||.+.++++++++++-++ +..++.-+|.+++++++++ .+.++-...++.+.+.+.
T Consensus 214 ~~~Ga~t~~s~~~~~~~~l~~l~~--~~~~l~~iP~~~La~ili~~~~~l~~~~~~~~~~~~~~ 275 (280)
T PF00916_consen 214 YRAGARTRLSGLISALFVLLVLLF--LAPLLAYIPKAVLAAILIVVGISLIDWSSLRRLWRVSK 275 (280)
T ss_pred HhcCcceeehhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhcCCh
Confidence 779999999999988876655443 4569999999999998875 466666666666655533
No 17
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=99.51 E-value=2.9e-12 Score=143.88 Aligned_cols=314 Identities=19% Similarity=0.206 Sum_probs=200.8
Q ss_pred hHhHHHHHHHHh--cCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHHHHhhccccccCcchhhH
Q 009755 48 TSVMIPTLLVHA--MGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAYIINDSSLQRITDDHERF 125 (526)
Q Consensus 48 ~~i~vPlil~~a--~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~i~~~~~~~~~~~~~~~~ 125 (526)
+++.+|--++.+ +|+++ ...++.+.++.++.++||+--++..|| |+.+..+..-+.+...+... +....
T Consensus 91 g~l~VPQ~iaYa~la~lpp-------iyGLYssf~~~~iY~~fGtsr~isiG~-~av~sLmv~~~v~~~v~~~~-~~~~~ 161 (665)
T KOG0236|consen 91 GSLSVPQGLAYALLAGLPP-------IYGLYSSFFPPLIYAIFGTSRHVSIGP-FAVVSLMVGTVVSQVVLSEA-PSNDI 161 (665)
T ss_pred eeeecchHHHHHHHcCCCh-------HHHHHHHHHHHHHheeccCCCcccccH-HHHHHHHHHHHHHHHHhccC-CCcCc
Confidence 456678777655 68886 789999999999999999999999888 33332222210000000000 00001
Q ss_pred HhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhcc------cc---------------
Q 009755 126 IQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPL------LG--------------- 184 (526)
Q Consensus 126 ~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~------~~--------------- 184 (526)
...++.+...++++|++|+++|++|+ |.+.+++|..++..++...++.+.-.+++. ..
T Consensus 162 ~~~i~va~~lt~l~Giiq~~mG~lrL-Gfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~ 240 (665)
T KOG0236|consen 162 ATTIQVATTLTFLTGIIQLILGLLRL-GFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDL 240 (665)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHh
Confidence 14678888999999999999999998 999999996554445555555444433322 11
Q ss_pred --c------chhhHHHHHHHHHHHHHhhhccCCCCCCCc--cchhhHHHHHHHHHHHHHHHHhhcCCCCCCCcccccccc
Q 009755 185 --N------CVEIGIPMLLLVIGLSQYLKHVRPFRDLPI--FERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISCRT 254 (526)
Q Consensus 185 --~------~~~v~~~~l~~ii~l~~~~~~~~~~~~~~~--~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~~~ 254 (526)
. ++.+++..++++++...+.++. ++++ .....-++.+++++++++.+.....+.. ..+
T Consensus 241 ~~~~~~~~~~~~~~l~~l~~L~~~k~~~~~~----~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~~--------~~~ 308 (665)
T KOG0236|consen 241 LANLPKTLATLVLSLIFLVVLLLTKELNPKF----KKKLFSVPIPFELIVVIIGTLISYIFRLEGRYGP--------IIV 308 (665)
T ss_pred hhcccccchhhhhHHHHHHHHHHHHHhhhhh----cccceeecccHHHHHHHHHHHHHHHhccccccCC--------eee
Confidence 0 1222333333222221122221 1221 2334578999999998887764321100 011
Q ss_pred CccCcCCCCCccccCccccccCCccc--HHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHH
Q 009755 255 DRANLISTAPWFKFPYPLQWGPPTFS--AGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILL 332 (526)
Q Consensus 255 d~~~~v~~a~~~~lP~~~~~g~P~F~--~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~il 332 (526)
+ + + .+++ | +...|.++ ...+...+.+++++.+|+++-.++.++..++ +-+.||++.|-|++|++
T Consensus 309 ~--~-i--~~g~--~---~~~lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y----~vd~nqELiAlG~~Ni~ 374 (665)
T KOG0236|consen 309 G--E-I--PRGF--P---PPSLPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHGY----KVDSNQELIALGISNIL 374 (665)
T ss_pred c--c-C--CCCC--C---CCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----eeCCChHHHHHHHHHHh
Confidence 1 0 1 1111 2 12223332 3456668899999999998877777766543 35779999999999999
Q ss_pred hhhcCCCCCCcccccchhhhhhcccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHH-HHH
Q 009755 333 DGLFGTGTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCV-LFG 400 (526)
Q Consensus 333 aglfG~~p~tt~s~~n~g~i~~Tg~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~-~fg 400 (526)
+++|++.|.+... .+..+-..+|+.++.+.++.++..++.=+ .++.++..+|.++++++.+. +.+
T Consensus 375 sSff~~~p~tgs~-sRSav~~~sG~~T~~s~i~~~~~vl~~l~--~l~p~f~~iP~~vLaaIIi~a~~~ 440 (665)
T KOG0236|consen 375 SSFFGCYPTTGSF-SRSAVNIKSGGRTQVAGIVSAALVLLALL--FLGPLFYYIPKCVLAAIIISALIG 440 (665)
T ss_pred hhhhceEcccchh-hHHHHHhhcCCcchHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHhhH
Confidence 9999999999988 88888889999999997777665433322 35679999999999998775 344
No 18
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=98.42 E-value=0.00049 Score=79.36 Aligned_cols=316 Identities=17% Similarity=0.180 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEechhhhH---HHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHh
Q 009755 71 IQTLLFVSGINTLLQALFGTRLPAVVGGSFAYV---IPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILG 147 (526)
Q Consensus 71 i~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i---~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg 147 (526)
++=+++.++++.++.++++..--++.|++.-.. -.+..+...++. +-++...=..+.++++.++++
T Consensus 403 v~E~Llstai~Giifslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~~-----------~yl~~~~WigiW~~~~~~lla 471 (900)
T TIGR00834 403 VSELLISTAVQGVLFALLAAQPLLVVGFSGPLLVFEEAFFSFCESNGL-----------EYLVGRVWIGLWLVLLVLLLV 471 (900)
T ss_pred HHHHHHHHHHHHHHHhhhcCCceEEecCcccHHHHHHHHHHHHhhcCC-----------chHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999766666777753222 112222222110 113333334678888999999
Q ss_pred hhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhcccc-------------------------------------------
Q 009755 148 YSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPLLG------------------------------------------- 184 (526)
Q Consensus 148 ~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~~~------------------------------------------- 184 (526)
.+.. ..+.|+++.-.--.+-++|++.-+..+++..-
T Consensus 472 ~~~~-s~lvryiTRFTeEiFa~lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (900)
T TIGR00834 472 ATEG-SFLVRYISRFTQEIFSFLISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLG 550 (900)
T ss_pred HHhH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccccccccccccccc
Confidence 8876 78889998766555555666544444332110
Q ss_pred --cc---hhhHHHHHHH---HHHHHHhhhccCC-----CCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCccccc
Q 009755 185 --NC---VEIGIPMLLL---VIGLSQYLKHVRP-----FRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQIS 251 (526)
Q Consensus 185 --~~---~~v~~~~l~~---ii~l~~~~~~~~~-----~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~ 251 (526)
+| +..++..+++ ++.++.+++++.. .+.++++.=+++.+++++.+.+.+.++.. +-+.-
T Consensus 551 ~~~c~~~~~~~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~~v--~~~kl------ 622 (900)
T TIGR00834 551 GNNCRFQPNTALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIGDT--YTQKL------ 622 (900)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhccC--ccccc------
Confidence 00 2233333322 3344555655431 12234455578999999988888765421 10000
Q ss_pred ccc-CccCcC-CCCCccccCccccccCCccc-HHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhH
Q 009755 252 CRT-DRANLI-STAPWFKFPYPLQWGPPTFS-AGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGI 328 (526)
Q Consensus 252 ~~~-d~~~~v-~~a~~~~lP~~~~~g~P~F~-~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl 328 (526)
... .+...- ..-.|+--|.......|.|. ..++++.+.+++.-++|+-=+..-+++- +++-++....+=.++.-|+
T Consensus 623 ~Vp~~f~pt~p~~R~W~i~p~~~~~~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~-e~kLkKgsgyH~Dllllg~ 701 (900)
T TIGR00834 623 SVPSGLKVTNPSARGWFIPPLGENRPFPWWMMFAAALPALLVFILIFMEQQITTLIVSKK-ERKLKKGSGFHLDLLLVVG 701 (900)
T ss_pred CCCCCcCCCCCCCCCeEEccccccccccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCc-cccCCCCcccchHHHHHHH
Confidence 000 011000 01245532211011113333 5677778888888888854333223221 1222334456668899999
Q ss_pred HHHHhhhcCCCCCCcccccchhhh-hh---------------cccCc-chHHHHHHHHHHHHHhhhHHHHHHHhCChhHH
Q 009755 329 GILLDGLFGTGTGSTVSVENVGLL-GL---------------TRVGS-RRVVQISAGFMIFFSCLGKFGAVFASIPIPIF 391 (526)
Q Consensus 329 ~~ilaglfG~~p~tt~s~~n~g~i-~~---------------Tg~~S-R~~~~~~g~~lillgl~pk~~al~a~IP~~Vl 391 (526)
-+.++|++|=.+.+....++.--+ ++ .+|.. |.+....+++. .++++ ...++..||.+|+
T Consensus 702 ~~~v~sllGLPw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~lLi-glsv~--~~PvL~~IP~aVL 778 (900)
T TIGR00834 702 MGGVAALFGLPWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAVLV-GLSIL--MEPILKRIPLAVL 778 (900)
T ss_pred HHHHHHhcCCCcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHHHH-HHHHH--HHHHHhhccHHHH
Confidence 999999998776555422222110 11 12332 55666656532 22222 3448999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 009755 392 AALYCVLFGLVASVGLSFLQ 411 (526)
Q Consensus 392 gg~ll~~fg~i~~~Gi~~l~ 411 (526)
.|++++| |.-...|.+...
T Consensus 779 ~GvFlYM-Gv~SL~GnQ~~~ 797 (900)
T TIGR00834 779 FGIFLYM-GVTSLSGIQLFD 797 (900)
T ss_pred HHHHHHH-HHhhcccCHHHH
Confidence 9999986 545555555543
No 19
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=98.21 E-value=0.00055 Score=77.39 Aligned_cols=315 Identities=12% Similarity=0.121 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcceEEechhhhH---HHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHH
Q 009755 69 RVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYV---IPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQII 145 (526)
Q Consensus 69 ~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i---~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~il 145 (526)
.-++=+++...++.++.+++|..-.++.|++.-.+ -.+..+..+.+. +-++...=..+.+.++.++
T Consensus 392 ~~v~E~L~stal~GiifslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~~-----------dyl~~r~wVglW~~~l~il 460 (876)
T KOG1172|consen 392 IGVVETLLSTALCGIIFSLFGGQPLLILGVTGPLLVFEKALFKFCKDNGL-----------DYLAFRAWVGLWTAFLLIL 460 (876)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHHHHhhCCC-----------chhhHHHHHHHHHHHHHHH
Confidence 34567889999999999999888778888763222 112223322211 1233444456788889999
Q ss_pred HhhhhhhhhHhhhcCcccHHHHHHHHHHHhHHhhhcc-----------c------------cc-------------chhh
Q 009755 146 LGYSQVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPL-----------L------------GN-------------CVEI 189 (526)
Q Consensus 146 lg~~g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~-----------~------------~~-------------~~~v 189 (526)
++.+.. ..+.++|+...-=.+-++|.+..+..++.. . .. .+..
T Consensus 461 laa~~a-s~lv~~~TRfteEiF~~LIs~iFi~eai~kl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 539 (876)
T KOG1172|consen 461 LAATNA-SSLVKYITRFTEEIFGLLISLIFIYEAIKKLIKIFKGLPIEFDSKPNPGADWSGPECESVSGTLLGSSCRPDT 539 (876)
T ss_pred HHHhhh-hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCcccccccccccccCcccCCCcCCcch
Confidence 998886 888888887554444445544444443320 0 00 1233
Q ss_pred HHHHHHH---HHHHHHhhhccCC-----CCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCccccccccCccCcCC
Q 009755 190 GIPMLLL---VIGLSQYLKHVRP-----FRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISCRTDRANLIS 261 (526)
Q Consensus 190 ~~~~l~~---ii~l~~~~~~~~~-----~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~~~d~~~~v~ 261 (526)
++..+++ .+.++.++|++.. .+.+.+..=+++.+.+++-+.+.+..+.. .+.+- ..+..+...-.
T Consensus 540 ~llslil~~gt~~~a~~lr~fr~s~yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~--~~~kl-----~vp~~~~~t~~ 612 (876)
T KOG1172|consen 540 ALLSLILMFGTLFLALTLRKFKSSRYFPRKVRSLISDFGVPLSILVFSLIDYFGGSV--ETPKL-----PVPSVFPPTWP 612 (876)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHhhhhHHHHHHHHHHHhhcccc--CCCcc-----ccCcCCCCCCc
Confidence 3333333 4445566666531 11233444567899998888887766421 11100 00000111011
Q ss_pred C-CCccccCccccccCCccc-HHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCC
Q 009755 262 T-APWFKFPYPLQWGPPTFS-AGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTG 339 (526)
Q Consensus 262 ~-a~~~~lP~~~~~g~P~F~-~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~ 339 (526)
. -.|+-.|.- ..|.+. ..++++.+.+++.-++|+-=+..-+++. +++-++....+=.++.-|+-+.++|++|=.
T Consensus 613 ~~rgw~v~~~~---~~P~~~~~~A~ipalll~iLiFmDqqIts~iv~rk-e~kLKKgsgyH~DLlllgil~~icsllGLP 688 (876)
T KOG1172|consen 613 FDRGWFVPPFG---KNPWWYVFAALIPALLLTILIFMDQQITAVIVNRK-ENKLKKGSGYHLDLLLLGILTLICSLLGLP 688 (876)
T ss_pred ccCCeeeCCCC---CCCHHHHHHHHHHHHHHHHHHHhcchHHHHHhhcc-cccCCCCcchhHHHHHHHHHHHHHHhcCCC
Confidence 1 245443311 123222 4566777778888888754222222221 122233445566899999999999999887
Q ss_pred CCCcccccchhhhhh----c------------ccCc-chHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHH
Q 009755 340 TGSTVSVENVGLLGL----T------------RVGS-RRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLV 402 (526)
Q Consensus 340 p~tt~s~~n~g~i~~----T------------g~~S-R~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i 402 (526)
+.++...++.--+.. + +|.. |.+....+++.. +.-....++..||.||+.|+.++| |.=
T Consensus 689 w~~~a~p~S~~H~~SL~v~~~~~apge~~~i~~V~EQRvtgll~~llvg---ls~~~~pvL~~IP~~VL~GvFlYM-gv~ 764 (876)
T KOG1172|consen 689 WSNAATVQSPMHTKSLAVESETSAPGEQPQIVGVREQRVTGLLQFLLVG---LSVLLLPVLKLIPMPVLYGVFLYM-GVS 764 (876)
T ss_pred ccccccccCHHHHHHHHHhhcccCCCCccccccchhhhhHHHHHHHHHH---HHHHHHHHHhhccHHHHHHHHHHH-hhc
Confidence 766665455432211 1 1222 444555555433 222355689999999999999985 333
Q ss_pred HHHHHHhh
Q 009755 403 ASVGLSFL 410 (526)
Q Consensus 403 ~~~Gi~~l 410 (526)
...|.|..
T Consensus 765 SL~Gnqf~ 772 (876)
T KOG1172|consen 765 SLPGNQFF 772 (876)
T ss_pred cCCccHHH
Confidence 33444433
No 20
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=98.09 E-value=0.0021 Score=66.39 Aligned_cols=343 Identities=13% Similarity=0.159 Sum_probs=177.5
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHH------HHHHHHHHHHHHHHHHHHHhCCC
Q 009755 18 FQVFQMFLSAGFGKAETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKA------RVIQTLLFVSGINTLLQALFGTR 91 (526)
Q Consensus 18 ~~~~~y~~~d~~p~~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~------~li~a~ll~sGi~tllq~~~G~r 91 (526)
.+|..|+.+|-.|.. +|.---.+|+++. ....++.+|++++-.. -++.+.+|+.=+.+++.- .++
T Consensus 52 ~rD~rfE~ED~vPAl----AgtIGkivMvsAv---~aafA~~lgL~~~Fv~envR~EllI~a~lFvil~Sgfl~P--~an 122 (492)
T PF11840_consen 52 FRDYRFEWEDLVPAL----AGTIGKIVMVSAV---AAAFAAPLGLSPEFVIENVRYELLIAALLFVILFSGFLNP--RAN 122 (492)
T ss_pred CcccccchHHhhHHH----HhhhhHHHHHHHH---HHHHhhccCCChhHhhhhhhhhhhHHHHHHHHHHHhccCc--ccc
Confidence 346667777766543 3333334454332 1223344788875322 334444444444444332 456
Q ss_pred cceEEechhhhHHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHHHHH
Q 009755 92 LPAVVGGSFAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVVGLV 171 (526)
Q Consensus 92 lPiv~g~sfa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i~lI 171 (526)
++=-.||---.+|.+ ++. .+.+.++| ++-|++-++++++|--.++.++=..-|.|..+..+
T Consensus 123 LAGthgPmIpLIp~i---vaa--------------GgHPLalg--ilvg~fGlil~~~kggS~L~~LTs~gv~ggLllyl 183 (492)
T PF11840_consen 123 LAGTHGPMIPLIPLI---VAA--------------GGHPLALG--ILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYL 183 (492)
T ss_pred ccCCCCCcchhhHHH---HHc--------------CCCcHHHH--HHHHHHHHHHHHhcchhHHHhhhcCccccceeeee
Confidence 666666654444432 221 13455555 45578888999988778899998888888776666
Q ss_pred HHH----hHHhhhcccc--cchhhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHhhcCCCCCC
Q 009755 172 GLG----LFQRGFPLLG--NCVEIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLISVTIIWIYSVILTASGAYRGKP 245 (526)
Q Consensus 172 Gl~----l~~~~~~~~~--~~~~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~ 245 (526)
|+. .+..-..+.. +...++++.++..+++-.|+.+. .| |..++-++-+++-++++.+|+. ++...
T Consensus 184 G~~G~~~qi~kl~~wa~~~~~~~i~fvvi~~tiv~Ya~L~k~----~K---rWLaIPl~~~~a~~~a~~lGa~--f~f~t 254 (492)
T PF11840_consen 184 GFVGLIGQIKKLFAWANGFDMGYIAFVVIIVTIVLYAYLAKI----EK---RWLAIPLCSILAGVLAFALGAP--FEFTT 254 (492)
T ss_pred hhhhHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHh----cc---chhhhhHHHHHHHHHHHHcCCC--ceeec
Confidence 652 2222111111 13346666666555555555544 23 3456666666666677777642 11000
Q ss_pred CccccccccCccCcCCCCCccccCccccccCCcccHHHHHHHHHHHHHHH----hhhhhHHHHHHhhhcCCCC---CCcC
Q 009755 246 YTTQISCRTDRANLISTAPWFKFPYPLQWGPPTFSAGHSFAMMSAVLVSM----VESTGAYKAASRLAIATPP---PAYV 318 (526)
Q Consensus 246 ~~~~~~~~~d~~~~v~~a~~~~lP~~~~~g~P~F~~~~i~~~~~~~lv~~----~esig~~~av~~~~~~~~~---~~~~ 318 (526)
+ ....+++ ..=|-.=-+-++.|+|.+ .-++..++.++... -|.+|+- .-++.+- +++ ..-+
T Consensus 255 ~----pglp~ln----P~YWWge~tGw~LglP~~--~hfiav~PFAiLAVaMWSpDflghr-vFqelny-pk~~~kvlMn 322 (492)
T PF11840_consen 255 E----PGLPNLN----PMYWWGEETGWQLGLPTL--EHFIAVLPFAILAVAMWSPDFLGHR-VFQELNY-PKETKKVLMN 322 (492)
T ss_pred C----CCCCCCC----CcccccCCcccccCCCcH--HHHHHhccHHHHHHHHhCchHHHHH-HHHHhcC-chhhcceeec
Confidence 0 0000111 000111011235566764 33444433333332 2555543 3455442 222 2237
Q ss_pred CCcchhhHhHHHHHhhhcCCCCCCcccccchhhhh--hcccCcchHHHHHHHHHHHHHhhh---HHHHHHHhCChhHHHH
Q 009755 319 LSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLLG--LTRVGSRRVVQISAGFMIFFSCLG---KFGAVFASIPIPIFAA 393 (526)
Q Consensus 319 ~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i~--~Tg~~SR~~~~~~g~~lillgl~p---k~~al~a~IP~~Vlgg 393 (526)
++.....-.+=+++++.+|+-..+++- ..- .+- +.|.-=|--.+..++++++.++.+ +++ +=.||+--
T Consensus 323 vDDTm~~~siRQ~vGs~lGGgN~~SsW-gTy-mIPaaIaKRPIpggAiLtg~~Ci~~av~GyPMdla-----vw~Pvl~v 395 (492)
T PF11840_consen 323 VDDTMTMCSIRQIVGSILGGGNIASSW-GTY-MIPAAIAKRPIPGGAILTGLLCIVAAVWGYPMDLA-----VWPPVLRV 395 (492)
T ss_pred ccchhHHHHHHHHHhhcccCCcccccc-hhh-hhhHHHhcCCCCchHHHHHHHHHHHHHhcCcchhh-----hcccHHHH
Confidence 888999999999999999988543332 111 111 112111223567788888877764 222 22456666
Q ss_pred HHHH-HHHHHHHHHHHhhhccccC
Q 009755 394 LYCV-LFGLVASVGLSFLQFTNMN 416 (526)
Q Consensus 394 ~ll~-~fg~i~~~Gi~~l~~v~~~ 416 (526)
++++ +|--+.-+|+++.++-+-+
T Consensus 396 ALlvGVflPLleAGmqm~r~~k~s 419 (492)
T PF11840_consen 396 ALLVGVFLPLLEAGMQMTRKGKTS 419 (492)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcc
Confidence 6555 5666677899988755443
No 21
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=95.97 E-value=0.0057 Score=67.00 Aligned_cols=182 Identities=14% Similarity=0.143 Sum_probs=0.8
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCccccccc-cCccCcCCC-CCccccCccccccCCccc-HHHHHHHHH
Q 009755 213 LPIFERFPVLISVTIIWIYSVILTASGAYRGKPYTTQISCR-TDRANLIST-APWFKFPYPLQWGPPTFS-AGHSFAMMS 289 (526)
Q Consensus 213 ~~~~r~~~vLigiivG~l~a~~lg~~g~~~~~~~~~~~~~~-~d~~~~v~~-a~~~~lP~~~~~g~P~F~-~~~i~~~~~ 289 (526)
|+++.=+++.+++++-+.+...++.. . ++ ... .++...-.+ -+|+--|. ...|.|. ..++++.+.
T Consensus 277 R~~isDf~v~iaI~~~~~~~~~~~~~--~-~k------L~vp~~f~pt~~~~r~W~v~p~---~~~p~w~~~aA~~pall 344 (510)
T PF00955_consen 277 REIISDFGVPIAILIMTLVDYLFGVD--T-PK------LNVPSSFKPTSPGKRGWFVNPF---GSLPWWAIFAAIIPALL 344 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhHHhhHHHHHHHHHHHHHHHhccc--c-cc------cCCCCCCCCCCCCCCCeecCcc---cCCCHHHHHHHHHHHHH
Confidence 44455577888988887776655410 0 00 000 012110111 24554332 1223333 356666677
Q ss_pred HHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccchhhh-h---------------
Q 009755 290 AVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLL-G--------------- 353 (526)
Q Consensus 290 ~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i-~--------------- 353 (526)
+++.-.+|+-=+..-+++. +++-++....+=.+..-|+-+.++|++|=...++...++.--+ +
T Consensus 345 l~iL~F~DqnIts~ivn~~-e~kLkKg~gyH~DL~llgi~~~v~sllGLPw~~aa~~~S~~Hv~sL~~~~~~~~pGe~~~ 423 (510)
T PF00955_consen 345 LTILFFMDQNITSLIVNRP-ENKLKKGSGYHLDLFLLGIITLVCSLLGLPWMNAATPQSPMHVRSLAVESETSAPGEKPK 423 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhHhHHHhCCh-hhccCCCCcccHHHHHHHHHHHHHHHcCCCCcccCccCCHHHhCcccEEeccccCCCCCe
Confidence 7777777743222212221 1122333455667899999999999998665554322222111 1
Q ss_pred hcccCc-chHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhhh
Q 009755 354 LTRVGS-RRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGLSFLQ 411 (526)
Q Consensus 354 ~Tg~~S-R~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l~ 411 (526)
..+++. |.......++ .|+..-+..++..||.||+.|+.+++ |.-...|.|...
T Consensus 424 i~~V~EqRvT~l~~~~L---igls~~l~pvL~~IP~~VL~GvFlym-G~~sL~gnq~~~ 478 (510)
T PF00955_consen 424 IVGVREQRVTGLLVHLL---IGLSLFLLPVLKLIPMPVLYGVFLYM-GVTSLSGNQFFE 478 (510)
T ss_dssp ---------------------------------------------------------TT
T ss_pred eCeEEEecccHHHHHHH---HHHHHHHHHHHHHhhHHHHHHHHHhh-eeeeecCccHHH
Confidence 112222 4555555442 23333456689999999999999985 333444444443
No 22
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=90.42 E-value=4 Score=45.68 Aligned_cols=122 Identities=15% Similarity=0.147 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccchh--hhhhcccC--
Q 009755 283 HSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVENVG--LLGLTRVG-- 358 (526)
Q Consensus 283 ~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g--~i~~Tg~~-- 358 (526)
=++.-+.++++..=|+++- +..++-+ ...|+.+.=++.++.++||+.+..... ...+ ++...-++
T Consensus 24 Dl~AGltva~valP~ama~----a~~aGv~------p~~GLyas~i~~~v~alfGgs~~~i~G-Pt~a~~~v~a~~i~~~ 92 (554)
T COG0659 24 DLLAGLTVAAVALPLAMAF----AIAAGVP------PEAGLYASIVAGIIYALFGGSRGLISG-PTGAFAVVLAAVIASL 92 (554)
T ss_pred HHHHHHHHHHHHhHHHHHH----HHHcCCC------HHHHHHHHHHHHHHHHHHcCCccceec-cchhhHHHHHHHHHHH
Confidence 3556667777777777753 3344422 247899999999999999999977554 3322 22122222
Q ss_pred -c------chHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhhhccccC
Q 009755 359 -S------RRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGLSFLQFTNMN 416 (526)
Q Consensus 359 -S------R~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l~~v~~~ 416 (526)
. -.+...+|++.+++|++ |++.++..||.||+-|.+--+--.|+..-+..+...+..
T Consensus 93 ~~~g~~~~~~~tllaGv~~i~~G~l-RLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~~ 156 (554)
T COG0659 93 VETGLALAFLATLLAGVFQILLGLL-RLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLASK 156 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 1 12467788999999988 899999999999999987765555666666666555554
No 23
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=85.85 E-value=8.5 Score=43.16 Aligned_cols=119 Identities=13% Similarity=0.077 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccchh-hhh-----hccc
Q 009755 284 SFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVENVG-LLG-----LTRV 357 (526)
Q Consensus 284 i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g-~i~-----~Tg~ 357 (526)
++.-+.++++.+-|+++- +..++-+ ..-|+.+.-+..++.++||+.+.......+.- ++. .-+.
T Consensus 18 i~aGltv~~~~iP~~~ay----A~laglp------p~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~~ 87 (563)
T TIGR00815 18 LMAGLTVGILLIPQAMAY----AILAGLS------PIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVGL 87 (563)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHcCCC------chhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhcC
Confidence 556667777888787753 3344432 23579999999999999999998877633321 111 1111
Q ss_pred Ccc----------hHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhhhcc
Q 009755 358 GSR----------RVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGLSFLQFT 413 (526)
Q Consensus 358 ~SR----------~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l~~v 413 (526)
... .....+|++++++|++ |++.+...+|.||+.|.+.-+.-.+..+-++.+...
T Consensus 88 ~~~~~~~~~~~a~~l~~l~Gi~~~~~g~l-rlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~ 152 (563)
T TIGR00815 88 QYLFDCDAIRLAFTLTLLAGIFQVILGLL-RLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGI 152 (563)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 111 4567788999999988 899999999999999987766555665555555433
No 24
>PRK11660 putative transporter; Provisional
Probab=79.56 E-value=22 Score=39.93 Aligned_cols=117 Identities=11% Similarity=0.100 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccchhhhhhc------c
Q 009755 283 HSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLLGLT------R 356 (526)
Q Consensus 283 ~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i~~T------g 356 (526)
=++.-+.++++.+-|+++ .+..++.++ .-|+.+.=+++++.++||+.+......++....... +
T Consensus 32 D~iAGltv~~~~iPq~ma----yA~lag~pp------~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~~~~~~~ 101 (568)
T PRK11660 32 DLIAGITVGIIAIPLAMA----LAIASGVPP------QYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFG 101 (568)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHcCCCh------HHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHHHHHHhh
Confidence 355666788888888775 334555331 237999999999999999999887763332111111 1
Q ss_pred cC-cchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhh
Q 009755 357 VG-SRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGLSFL 410 (526)
Q Consensus 357 ~~-SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l 410 (526)
.. .-.....+|++++++|++ +++.+...||.||+.|.+.-+--.+....++.+
T Consensus 102 ~~~~~~~~~l~Gii~~l~gll-rlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~ 155 (568)
T PRK11660 102 LAGLLVATLMSGIILILMGLA-RLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDF 155 (568)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 012366788888999988 689999999999999977654334444444444
No 25
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=71.36 E-value=75 Score=34.13 Aligned_cols=131 Identities=13% Similarity=0.049 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhh-
Q 009755 71 IQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYS- 149 (526)
Q Consensus 71 i~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~- 149 (526)
+...+...|++|++-+.|| ..++..+ -++ .++... .+... + ...=.++.+.+|++++++|++
T Consensus 256 ~~~~~~~tGl~sll~ApfG-g~~~nla----ait--aAic~G--~~ah~-------d-~~rR~~a~i~~Gv~yll~glfa 318 (395)
T TIGR00843 256 AKPIIAAAGLAALFAAFAG-GISIGIA----AIT--AAICMG--KDAHE-------D-KDKRWIAAAAAGIFYLLAGLFA 318 (395)
T ss_pred chHHHHHHHHHHHHHhccC-Cchhhhh----HHh--HHHhcC--ccccc-------C-cCccchHHHHHHHHHHHHHHHH
Confidence 4777889999999999986 3333222 122 122211 11111 1 122237888999999999998
Q ss_pred hhhhhHhhhcCcccHHHHHHHHHHHhHHhhhcccc------cchhhHHHHHHHHHHHHHhhhccCCCCCCCccchhhHHH
Q 009755 150 QVWGLFSRFFSPLGIAPVVGLVGLGLFQRGFPLLG------NCVEIGIPMLLLVIGLSQYLKHVRPFRDLPIFERFPVLI 223 (526)
Q Consensus 150 g~~~~l~~~fPp~V~G~~i~lIGl~l~~~~~~~~~------~~~~v~~~~l~~ii~l~~~~~~~~~~~~~~~~r~~~vLi 223 (526)
+.+..+...+|+..+.. +-|+.++..-.+++. .+-+-+++++++. ..+ -.++...+-++
T Consensus 319 g~i~~l~~~~P~~li~~---laGlAll~~~~~~l~~a~~~~~~r~~a~~tflvt------aSg------~~~~gigaafW 383 (395)
T TIGR00843 319 GAITALFAALPKELIAA---LAGLALLGAIAGNIKIALHEDQERDAALIAFLAT------ASG------LHFLGIGSAFW 383 (395)
T ss_pred HHHHHHHHHCCHHHHHH---HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH------Hhc------CCcccccHHHH
Confidence 77788899999877553 345555544332211 1223344444332 122 23467889999
Q ss_pred HHHHHHHHHH
Q 009755 224 SVTIIWIYSV 233 (526)
Q Consensus 224 giivG~l~a~ 233 (526)
|+++|.+...
T Consensus 384 gl~~G~~~~~ 393 (395)
T TIGR00843 384 GLCAGGLAYF 393 (395)
T ss_pred HHHHHHHHHH
Confidence 9999976543
No 26
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=70.89 E-value=11 Score=31.25 Aligned_cols=60 Identities=25% Similarity=0.296 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHHHHHHHhhHhHHHHHHHHh--cCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEechhhh
Q 009755 30 GKAETILLAFQNYILMLGTSVMIPTLLVHA--MGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAY 102 (526)
Q Consensus 30 p~~~~i~~GlQh~lam~~~~i~vPlil~~a--~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~ 102 (526)
.+++.+++|+.-.+. .+|.-++.+ .|+++ +..+.++.+..++-++||.+.-++.||+.+.
T Consensus 15 ~~~~D~~aGltva~~------~iPq~~a~A~lAg~pp-------~~GLy~a~~~~liyalfG~s~~~~~Gp~a~~ 76 (84)
T PF13792_consen 15 NLRGDLLAGLTVALV------AIPQGMAYALLAGVPP-------IYGLYAAIIPPLIYALFGSSRHMIVGPTAAM 76 (84)
T ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHcCCCC-------CeeeHHHHHHHHHHhhccCCCccccChHHHH
Confidence 467899999987554 455555543 79996 7889999999999999998888999986433
No 27
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=61.95 E-value=49 Score=35.20 Aligned_cols=115 Identities=22% Similarity=0.171 Sum_probs=72.7
Q ss_pred cccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCc----chhhHhHHHHHhhhcCCCCCCcccccchhhhh
Q 009755 278 TFSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSR----GIGWQGIGILLDGLFGTGTGSTVSVENVGLLG 353 (526)
Q Consensus 278 ~F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r----~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i~ 353 (526)
+|+++.+..-++..+++..-+..-+....+..+. ++.+... -.++.|+.++.-++.==.|..+.- +.-|..-
T Consensus 2 d~~~s~~~aG~va~lvg~tg~~aiv~qaa~a~g~---s~~q~~SWl~al~~~~Gl~~i~lSl~yR~Pi~~AW-StPGaAl 77 (378)
T PF03594_consen 2 DFSLSAVSAGFVAVLVGYTGPVAIVLQAAQAAGA---SPAQIASWLFALYLGMGLTSILLSLRYRMPIVTAW-STPGAAL 77 (378)
T ss_pred CCcHHHHHHHHHHHHhhccchHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhc-chHHHHH
Confidence 3556666666677777776666655555544443 2233333 345566677777776667766654 3333221
Q ss_pred hcccC---c--c--hHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHH
Q 009755 354 LTRVG---S--R--RVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYC 396 (526)
Q Consensus 354 ~Tg~~---S--R--~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll 396 (526)
..... + - =++++++++++++|+.+.+..++..||.++..+++-
T Consensus 78 L~~~~~~~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLA 127 (378)
T PF03594_consen 78 LATSLPGYSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLA 127 (378)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 11111 1 1 136788999999999999999999999999888764
No 28
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=54.15 E-value=3.3e+02 Score=29.86 Aligned_cols=126 Identities=8% Similarity=0.040 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHhhHhHH-HHHH---HHhcCCChhHHHHHHHHHHHHHHHHHHHHHH----hCCCcceEEechhhh
Q 009755 31 KAETILLAFQNYILMLGTSVMI-PTLL---VHAMGGSNGDKARVIQTLLFVSGINTLLQAL----FGTRLPAVVGGSFAY 102 (526)
Q Consensus 31 ~~~~i~~GlQh~lam~~~~i~v-Plil---~~a~gl~~~~~~~li~a~ll~sGi~tllq~~----~G~rlPiv~g~sfa~ 102 (526)
.++.+....--+...|..-... |+.. ...+|++++|...+.+.-.+..++.-+..+. +|.|.....+.....
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 3456665554455554433333 2222 2248999999888887777777777565554 688876544443322
Q ss_pred HHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhcCcccHHHHH
Q 009755 103 VIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGIAPVV 168 (526)
Q Consensus 103 i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~fPp~V~G~~i 168 (526)
++......... +. . .++...+..-++.|+--... ....+.+.++||+.--|...
T Consensus 112 i~~~~~~~a~~---~~-~------~s~~~lli~r~l~Gigg~~f--~~~~~~vs~wfp~~~rG~A~ 165 (462)
T PRK15034 112 IPCVWLGIAVQ---NP-N------TPFGIFIVIALLCGFAGANF--ASSMGNISFFFPKAKQGSAL 165 (462)
T ss_pred HHHHHHHHHHc---cc-C------CCHHHHHHHHHHHHHHHHhH--HHHHHHHHHHCCHhHhHHHH
Confidence 22221111000 00 0 13444444445555432222 22347789999987666543
No 29
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=52.16 E-value=3.4e+02 Score=29.37 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=26.0
Q ss_pred HHhcCCChhHHHHHHHHHHHHHHHHHHHHHH----hCCCcceE
Q 009755 57 VHAMGGSNGDKARVIQTLLFVSGINTLLQAL----FGTRLPAV 95 (526)
Q Consensus 57 ~~a~gl~~~~~~~li~a~ll~sGi~tllq~~----~G~rlPiv 95 (526)
.+..|++..+........++...++.++.+. +|.|..+.
T Consensus 63 ~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~ 105 (476)
T PLN00028 63 RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSA 105 (476)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 3458999888766655555666667777764 57775543
No 30
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=50.81 E-value=1.5e+02 Score=31.69 Aligned_cols=76 Identities=16% Similarity=0.201 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhh
Q 009755 70 VIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYS 149 (526)
Q Consensus 70 li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~ 149 (526)
=++..+.+-|+++++-+++| ..|.. ++ ..-...+..+ +.. .. -..+++|++.++++++
T Consensus 254 ~~~~~l~~~Gi~~i~aglfG-~~p~t---~~--~~~~~~~~~t-g~~----------sr-----~~~~~~~~~lil~~l~ 311 (406)
T TIGR03173 254 DLAGGLRADGLGSALGGLFN-TFPYT---SF--SQNVGLVQLT-GVK----------SR-----YVVAAAGVILVLLGLF 311 (406)
T ss_pred hccchHHhccHHHHHHHHhC-CCCCc---ch--hhhHHHHHHh-CCC----------ch-----HhHHHHHHHHHHHHHH
Confidence 35788999999999999997 57742 21 1110001111 100 11 2236788888888888
Q ss_pred hhhhhHhhhcCcccHHHH
Q 009755 150 QVWGLFSRFFSPLGIAPV 167 (526)
Q Consensus 150 g~~~~l~~~fPp~V~G~~ 167 (526)
+.+..+...+|..|.|.+
T Consensus 312 ~~~~~l~~~iP~~vlgg~ 329 (406)
T TIGR03173 312 PKLAALVASIPQPVLGGA 329 (406)
T ss_pred HHHHHHHHhCCHHHHHHH
Confidence 777999999998877764
No 31
>COG4129 Predicted membrane protein [Function unknown]
Probab=49.75 E-value=2.1e+02 Score=30.08 Aligned_cols=78 Identities=15% Similarity=0.223 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhh
Q 009755 72 QTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQV 151 (526)
Q Consensus 72 ~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~ 151 (526)
.-|-++.+++.++-.++|+..|. ||.+.+++.+..+ -..+.+.+++-++|.++-+++-.+.+.++|
T Consensus 14 lKt~ia~~La~~ia~~l~~~~~~-----~A~i~AV~~l~~t--------~~~s~~~~~~r~~g~~iG~~~a~l~~~l~g- 79 (332)
T COG4129 14 LKTGLAAGLALLIAHLLGLPQPA-----FAGISAVLCLSPT--------IKRSLKRALQRLLGNALGAILAVLFFLLFG- 79 (332)
T ss_pred HHHHHHHHHHHHHHHHhCCCchH-----HHHHHHhhcccCc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 34557777777777777777654 6666554444211 123455677888888776666666555443
Q ss_pred hhhHhhhcCcccHHHHHHH
Q 009755 152 WGLFSRFFSPLGIAPVVGL 170 (526)
Q Consensus 152 ~~~l~~~fPp~V~G~~i~l 170 (526)
..|+..|+++++
T Consensus 80 -------~~~~~~~v~~~i 91 (332)
T COG4129 80 -------QNPIAFGVVLLI 91 (332)
T ss_pred -------ccHHHHHHHHHH
Confidence 345666665543
No 32
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=44.86 E-value=1.7e+02 Score=31.16 Aligned_cols=103 Identities=19% Similarity=0.246 Sum_probs=57.5
Q ss_pred HHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHHHHhhccccccCcchhhHHhhHHHHHH
Q 009755 55 LLVHAMGGSNGDKARVIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQG 134 (526)
Q Consensus 55 il~~a~gl~~~~~~~li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~g 134 (526)
.+++..|.+.++ ..-+..++.+-|++|++-+++|. .|...-.. -.+ ........ .+ =
T Consensus 254 a~~~~~~~~~~~-~~~~~r~l~~dg~~~~l~gl~G~-~~~t~~~e--n~g-~i~~t~v~-------------Sr-----~ 310 (389)
T PF00860_consen 254 AVARIAGKDDPR-PPRIRRGLLADGLGTILAGLFGT-SPTTTYSE--NAG-GIAATGVA-------------SR-----R 310 (389)
T ss_dssp HHHHHHTS-TCC-CCCHHHHHHHHHHHHHHHHHHT----EEE-HH--HHH-HHHHHTB---------------H-----H
T ss_pred HHHHHhCCCCcc-chhhcccceeeeeeeeechhhcC-CCCccccc--cch-hhhhhccc-------------cc-----e
Confidence 334445555443 34478999999999999999987 65522211 111 11111100 01 2
Q ss_pred HHHHHHHHHHHHhhhhhhhhHhhhcCccc-HHHHHHHHHHHhHHhhhc
Q 009755 135 ALIVASSIQIILGYSQVWGLFSRFFSPLG-IAPVVGLVGLGLFQRGFP 181 (526)
Q Consensus 135 a~ivaGvi~illg~~g~~~~l~~~fPp~V-~G~~i~lIGl~l~~~~~~ 181 (526)
..+.++++.+++++++.+..+...+|..| .|..+.+.|. ++-.+++
T Consensus 311 ~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~-i~~~gi~ 357 (389)
T PF00860_consen 311 VGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGM-IMMSGIR 357 (389)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHH-HHHHHHH
T ss_pred eeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHH-HHHHHhH
Confidence 45677888899999888899999999877 5555555554 3444443
No 33
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=42.02 E-value=1.4e+02 Score=32.20 Aligned_cols=49 Identities=10% Similarity=0.078 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhh-hHH--HHHHHhCChhHHHHHHHHHHHHHHHHHHHhhh
Q 009755 363 VQISAGFMIFFSCL-GKF--GAVFASIPIPIFAALYCVLFGLVASVGLSFLQ 411 (526)
Q Consensus 363 ~~~~g~~lillgl~-pk~--~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l~ 411 (526)
.+++|++.++++++ .|. ..+...+|..|.|++.+.+--.+...|++...
T Consensus 97 ~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~ 148 (415)
T TIGR00801 97 LIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAA 148 (415)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhc
Confidence 56677777788775 333 24588999999999887766667778888764
No 34
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=37.31 E-value=5.3e+02 Score=28.10 Aligned_cols=77 Identities=12% Similarity=0.102 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcceEEechhhhHHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhh
Q 009755 70 VIQTLLFVSGINTLLQALFGTRLPAVVGGSFAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYS 149 (526)
Q Consensus 70 li~a~ll~sGi~tllq~~~G~rlPiv~g~sfa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~ 149 (526)
-+.+++.+-|++|++-+++| ..|. .+++-=....... +.. .. -....+|++.+++|++
T Consensus 276 ~l~rgi~~dGi~s~laglfg-~~p~---tt~sqNvGvi~~T---gV~----------SR-----~v~~~aa~ilillgl~ 333 (433)
T PRK11412 276 RYRRSFVATGFMTLITVPLA-VIPF---SPFVSSIGLLTQT---GDY----------RR-----RSFIYGSVMCLLVALI 333 (433)
T ss_pred ccccchhhccHHHHHHHhcC-CCCC---Cchhhhhhhhhhc---CCc----------hh-----HHHHHHHHHHHHHHHH
Confidence 46889999999999999986 5654 2221111111111 100 01 2345778899999999
Q ss_pred hhhhhHhhhcCcccHHHHH
Q 009755 150 QVWGLFSRFFSPLGIAPVV 168 (526)
Q Consensus 150 g~~~~l~~~fPp~V~G~~i 168 (526)
+.+..+..-+|..|.|.+.
T Consensus 334 PK~~alia~IP~pVlGg~~ 352 (433)
T PRK11412 334 PALTRLFCSIPLPVSSAVM 352 (433)
T ss_pred HHHHHHHHhCCHHHHHHHH
Confidence 8889999999988777664
No 35
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=32.88 E-value=6.2e+02 Score=30.32 Aligned_cols=114 Identities=10% Similarity=-0.020 Sum_probs=73.5
Q ss_pred ccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCCcCCCcchhhHhHHHHHhhhcCCCCCCcccccchhhhh--hc-
Q 009755 279 FSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLLG--LT- 355 (526)
Q Consensus 279 F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfG~~p~tt~s~~n~g~i~--~T- 355 (526)
|+...+.+.+.+++.++.-++. -+...+++.+..-..+..+++++++.++=++||+-|.+--. ..|-+. .+
T Consensus 367 ~~~q~laa~ifiyFA~L~PaIa----FG~ll~~~T~g~~gv~E~Llstai~Giifslf~GQPL~IlG--~TGPilvF~~~ 440 (900)
T TIGR00834 367 LNPQCLAAVIFIYFAALSPAIT----FGGLLGEKTRNMMGVSELLISTAVQGVLFALLAAQPLLVVG--FSGPLLVFEEA 440 (900)
T ss_pred hcchhHHHHHHHHHHHhhHHhh----HHHHHHHhhCCcchHHHHHHHHHHHHHHHhhhcCCceEEec--CcccHHHHHHH
Confidence 5667777778888888877653 22222222223456788999999999999999999865543 122110 00
Q ss_pred --c-cC---------cchHHHHHHHHHHHHHhhh--HHHHHHHhCChhHHHHHHHHH
Q 009755 356 --R-VG---------SRRVVQISAGFMIFFSCLG--KFGAVFASIPIPIFAALYCVL 398 (526)
Q Consensus 356 --g-~~---------SR~~~~~~g~~lillgl~p--k~~al~a~IP~~Vlgg~ll~~ 398 (526)
+ |. .-|++++.++++++++.+- .+..+++-....+.+...-++
T Consensus 441 ly~~c~~~~~~yl~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~lIs~I 497 (900)
T TIGR00834 441 FFSFCESNGLEYLVGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSFLISLI 497 (900)
T ss_pred HHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHH
Confidence 0 11 1367888888888888775 455667777777777644443
No 36
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=28.59 E-value=6e+02 Score=26.12 Aligned_cols=61 Identities=16% Similarity=0.201 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhhHhHH---HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHH----hCCCcceEEe
Q 009755 37 LAFQNYILMLGTSVMI---PTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQAL----FGTRLPAVVG 97 (526)
Q Consensus 37 ~GlQh~lam~~~~i~v---Plil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~----~G~rlPiv~g 97 (526)
+-+.+++..++..+.. |..+.+..|.++.+.........+...++..+-+. +|.|..++.+
T Consensus 20 l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~ 87 (399)
T PRK05122 20 IVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFG 87 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHH
Confidence 4444455555444433 44455668999988888888888877887777765 5766655443
No 37
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=28.05 E-value=5.5e+02 Score=25.72 Aligned_cols=36 Identities=25% Similarity=0.274 Sum_probs=21.0
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 009755 51 MIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQA 86 (526)
Q Consensus 51 ~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~ 86 (526)
..|..+.+..|.++++...+.....+...++..+-.
T Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 276 (394)
T TIGR00883 241 YLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSG 276 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 346666566788877666555544455555554444
No 38
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=27.89 E-value=45 Score=36.77 Aligned_cols=78 Identities=13% Similarity=0.165 Sum_probs=46.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHH---H-HHHHHHHHHHHHHHHHHh----C-CCcceEE
Q 009755 26 SAGFGKAETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKAR---V-IQTLLFVSGINTLLQALF----G-TRLPAVV 96 (526)
Q Consensus 26 ~d~~p~~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~---l-i~a~ll~sGi~tllq~~~----G-~rlPiv~ 96 (526)
|++++|+...+.++-.++.+....+..|..-....++|++.+.. + +.+.-++..+..++.+++ + .|.|++.
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~ 107 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIV 107 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHH
Confidence 44678999999999999999888888876666556666533222 2 222223333333333332 2 2777776
Q ss_pred echhhhH
Q 009755 97 GGSFAYV 103 (526)
Q Consensus 97 g~sfa~i 103 (526)
|...+.+
T Consensus 108 s~ii~~~ 114 (488)
T KOG2325|consen 108 SFLIAII 114 (488)
T ss_pred HHHHHHH
Confidence 6543333
No 39
>PRK10489 enterobactin exporter EntS; Provisional
Probab=27.09 E-value=7.3e+02 Score=25.79 Aligned_cols=49 Identities=12% Similarity=0.108 Sum_probs=33.4
Q ss_pred hHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHH----hCCCcceEEe
Q 009755 48 TSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQAL----FGTRLPAVVG 97 (526)
Q Consensus 48 ~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~----~G~rlPiv~g 97 (526)
..+..|..+.+ .+.++.+...+.....+...+++++.+. +|.|..++.+
T Consensus 36 ~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~ 88 (417)
T PRK10489 36 LGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLA 88 (417)
T ss_pred HHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEeh
Confidence 34456766554 5778888777777777777888877764 5666655544
No 40
>COG3817 Predicted membrane protein [Function unknown]
Probab=26.83 E-value=6.8e+02 Score=25.38 Aligned_cols=95 Identities=16% Similarity=0.088 Sum_probs=48.2
Q ss_pred ccHHHHHHHHHHHHHHHhhhhhHHHHHHhhhcCCCCCC-cCCCcchhhHhHH--HH-HhhhcCCCCCCcccccchhhhhh
Q 009755 279 FSAGHSFAMMSAVLVSMVESTGAYKAASRLAIATPPPA-YVLSRGIGWQGIG--IL-LDGLFGTGTGSTVSVENVGLLGL 354 (526)
Q Consensus 279 F~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~-~~~~r~l~~dGl~--~i-laglfG~~p~tt~s~~n~g~i~~ 354 (526)
.+|..++|=+..++-..+-+.|--.++++...+-.+.+ +-+.-...+-|.+ ++ .+-.|..+|..|.. +|+-..
T Consensus 164 v~wa~iLPQ~LaaLG~vFa~aGvG~~ia~L~~~~i~~DsrfiaV~~Y~vgMalfTmiMGNaFAAFpViTag---IgvPil 240 (313)
T COG3817 164 VSWAAILPQMLAALGAVFASAGVGDVIAHLISEIIPADSRFIAVAAYCVGMALFTMIMGNAFAAFPVITAG---IGVPIL 240 (313)
T ss_pred hhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHcccchhceeeecc---ccccee
Confidence 45777887776666666655555556666654322221 2222223333332 33 34467788877765 554433
Q ss_pred cccCcchHHHHHHHHHHHHHhhh
Q 009755 355 TRVGSRRVVQISAGFMIFFSCLG 377 (526)
Q Consensus 355 Tg~~SR~~~~~~g~~lillgl~p 377 (526)
-+...--..+.+++- ..-|+|+
T Consensus 241 v~q~ganPaV~~Aig-M~sGfCG 262 (313)
T COG3817 241 VGQLGANPAVAGAIG-MLSGFCG 262 (313)
T ss_pred eeccCCChHHHHHHH-HHhhhhh
Confidence 333333334444443 3556665
No 41
>PTZ00207 hypothetical protein; Provisional
Probab=26.51 E-value=9.9e+02 Score=27.14 Aligned_cols=80 Identities=14% Similarity=0.009 Sum_probs=40.9
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHHH--HhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHH----hCC
Q 009755 17 TFQVFQMFLSAGFGKAETILLAFQNYILM--LGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTLLQAL----FGT 90 (526)
Q Consensus 17 ~~~~~~y~~~d~~p~~~~i~~GlQh~lam--~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tllq~~----~G~ 90 (526)
........+||..+|...+..-+-+...- +...+..|.+ .+..|.++.|...+.... ...|+..+.-++ +|.
T Consensus 13 ~~~~~~~~~~e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L-~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~ 90 (591)
T PTZ00207 13 LSTANQKPINEPRRFALLVLGAFCSICTSFMYAFNLISGAM-QARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGP 90 (591)
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCc
Confidence 34455667888878764443333222221 1222333433 455899998877665442 334444433333 566
Q ss_pred CcceEEec
Q 009755 91 RLPAVVGG 98 (526)
Q Consensus 91 rlPiv~g~ 98 (526)
|.-+..|.
T Consensus 91 R~vllig~ 98 (591)
T PTZ00207 91 RPIFVLSM 98 (591)
T ss_pred HHHHHHHH
Confidence 65554443
No 42
>KOG4085 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.52 E-value=1.6e+02 Score=27.01 Aligned_cols=44 Identities=18% Similarity=0.199 Sum_probs=34.4
Q ss_pred ccCcchHHHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHH
Q 009755 356 RVGSRRVVQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVA 403 (526)
Q Consensus 356 g~~SR~~~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~ 403 (526)
+-.+|.+++.++++.+++|++. .+..=|....++++.++-|.+.
T Consensus 29 r~l~rl~gilgaf~~~~fGvf~----~ITls~~c~vAgvlqm~agfiv 72 (175)
T KOG4085|consen 29 RWLCRLSGILGAFSCAIFGVFN----CITLSPLCIVAGVLQMMAGFIV 72 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh----HHhhhHHHHHHHHHHHHHHHHH
Confidence 4457888999999999988765 7778888888888877666554
No 43
>TIGR00822 EII-Sor PTS system, mannose/fructose/sorbose family, IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Man (PTS splinter group) family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine,N-acetylglucosamine, and other sugars. Other members of this family can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the sorbose-specific IIC subunits of this family of PTS transporters.
Probab=22.24 E-value=4e+02 Score=27.04 Aligned_cols=39 Identities=18% Similarity=0.262 Sum_probs=32.1
Q ss_pred hHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhhhccccC
Q 009755 377 GKFGAVFASIPIPIFAALYCVLFGLVASVGLSFLQFTNMN 416 (526)
Q Consensus 377 pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l~~v~~~ 416 (526)
+.+.+++..+|.-++.|..+. -+++=..|+.++.+.-++
T Consensus 164 ~~v~~il~~iP~~v~~Gl~va-ggmLPAvGfAmLl~~m~~ 202 (265)
T TIGR00822 164 SAVQAMLKAIPEVVTHGLQIA-GGIIVVVGYAMVLRMMFK 202 (265)
T ss_pred HHHHHHHHHCHHHHHHHHHHH-HhhHHHHHHHHHHHHHhh
Confidence 468889999999999887765 478888899888877775
No 44
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=22.12 E-value=2.7e+02 Score=29.85 Aligned_cols=145 Identities=8% Similarity=-0.076 Sum_probs=0.0
Q ss_pred ccccccCCCCCcccccccccccCCCCCHHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHH
Q 009755 4 QKTLKSLVPFDTATFQVFQMFLSAGFGKAETILLAFQNYILMLGTSVMIPTLLVHAMGGSNGDKARVIQTLLFVSGINTL 83 (526)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~y~~~d~~p~~~~i~~GlQh~lam~~~~i~vPlil~~a~gl~~~~~~~li~a~ll~sGi~tl 83 (526)
+..+|..-..|.++.+....+.+-+-=....+...++++.-...+....+ +.+.+|++..+...+.+.-.+..+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~--i~~~~~~s~~~~g~~~s~~~~~~~~~~~ 82 (467)
T PRK09556 5 NQVRKPTLDLPLEVQRKMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQND--MISTYGLSTTELGMIGLGFSITYGVGKT 82 (467)
T ss_pred cccCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHH--HHHhcCCCHHHHHHHHHHHHHHHHHHHh
Q ss_pred HHHH----hCCCcceEEechhhhHHHHHHHHhhccccccCcchhhHHhhHHHHHHHHHHHHHHHHHHhhhhhhhhHhhhc
Q 009755 84 LQAL----FGTRLPAVVGGSFAYVIPIAYIINDSSLQRITDDHERFIQTMRAIQGALIVASSIQIILGYSQVWGLFSRFF 159 (526)
Q Consensus 84 lq~~----~G~rlPiv~g~sfa~i~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~ga~ivaGvi~illg~~g~~~~l~~~f 159 (526)
+-+. +|.|.-+..+-..+.+............. ..+..+...-++.|+.+-....... ..+.+++
T Consensus 83 ~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l~G~~~~~~~~~~~-~~i~~~~ 151 (467)
T PRK09556 83 LVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGS----------VSLGLMIALWALSGFFQSTGGPCSY-STITRWT 151 (467)
T ss_pred hhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhccc----------chHHHHHHHHHHHHHHHhccchHHH-HHHHHHc
Q ss_pred Cc
Q 009755 160 SP 161 (526)
Q Consensus 160 Pp 161 (526)
|+
T Consensus 152 ~~ 153 (467)
T PRK09556 152 PR 153 (467)
T ss_pred Cc
No 45
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=21.90 E-value=1.3e+03 Score=26.94 Aligned_cols=39 Identities=5% Similarity=0.014 Sum_probs=29.9
Q ss_pred hcCCChhHHHHHHHHHHHHHHHHHHHHHH----hCCCcceEEe
Q 009755 59 AMGGSNGDKARVIQTLLFVSGINTLLQAL----FGTRLPAVVG 97 (526)
Q Consensus 59 a~gl~~~~~~~li~a~ll~sGi~tllq~~----~G~rlPiv~g 97 (526)
..|++.++...+.+..++...+++++.++ +|.|..++.+
T Consensus 196 ~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~ 238 (742)
T TIGR01299 196 DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLIC 238 (742)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 37899988888888888888999988875 5766555443
No 46
>PF05216 UNC-50: UNC-50 family; InterPro: IPR007881 This family contains several eukaryotic transmembrane proteins which are related to the Caenorhabditis elegans protein UNC-50 Q10045 from SWISSPROT. A mammalian homologue, UNCL is a novel inner nuclear membrane protein that associates with RNA and is involved in the cell-surface expression of neuronal nicotinic receptors. UNCL plays a broader role because UNCL homologues are present in two yeast and a plant species, none of which express nicotinic receptors and it is also found in tissues that lack nicotinic receptors.
Probab=21.68 E-value=86 Score=31.09 Aligned_cols=54 Identities=15% Similarity=0.137 Sum_probs=38.4
Q ss_pred HHHHHhcchhHHHHHHHHHHhhcCCCCCcccccCCcccccccccCCCCCCCccccCCcccccCCCC
Q 009755 460 FLNTIFSSPPTVGLIVAVFLDNTLEVEKSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFPP 525 (526)
Q Consensus 460 ~~~~~l~~gi~~g~l~ai~Ln~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 525 (526)
.+-..+..|++++++.-.+.|..++.+ .+++...|++-|=-|.|=.|.|-|||.
T Consensus 90 v~vdfl~~G~~iAT~~w~~~Nr~l~~~------------~~~~~~~~~~VEW~Y~FDVHcNaFfp~ 143 (231)
T PF05216_consen 90 VFVDFLLVGLIIATIFWFVANRFLRPS------------SSHSHSVEQDVEWGYCFDVHCNAFFPL 143 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC------------cCCCCCcCCceEEEEeeecchhhHHHH
Confidence 345567889999999999999988732 112234444555559999999999883
No 47
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.22 E-value=2.9e+02 Score=29.33 Aligned_cols=50 Identities=18% Similarity=0.355 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009755 363 VQISAGFMIFFSCLGKFGAVFASIPIPIFAALYCVLFGLVASVGLSFLQFTNM 415 (526)
Q Consensus 363 ~~~~g~~lillgl~pk~~al~a~IP~~Vlgg~ll~~fg~i~~~Gi~~l~~v~~ 415 (526)
+++++..++++|++..++.+.+.||.++..+++- |.+.--+++.++..+.
T Consensus 109 fiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlA---GILL~F~l~a~~a~~~ 158 (402)
T COG3135 109 FIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLA---GILLRFGLKAFKALPT 158 (402)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHH---HHHHHHHHHHHhccCC
Confidence 6788899999999999999999999998777654 3344445566555544
Done!