Query 009757
Match_columns 526
No_of_seqs 605 out of 2728
Neff 10.8
Searched_HMMs 46136
Date Thu Mar 28 16:58:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009757.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009757hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 1.5E-43 3.3E-48 324.4 30.3 412 90-513 20-438 (448)
2 COG2814 AraJ Arabinose efflux 100.0 7.4E-41 1.6E-45 312.0 39.5 380 96-513 10-390 (394)
3 TIGR00894 2A0114euk Na(+)-depe 100.0 9.8E-40 2.1E-44 328.6 42.2 423 93-521 13-462 (465)
4 PRK09556 uhpT sugar phosphate 100.0 1.4E-40 3.1E-45 334.1 34.3 402 93-508 23-448 (467)
5 PRK03545 putative arabinose tr 100.0 2.3E-39 5E-44 318.4 41.6 375 96-510 6-381 (390)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2E-39 4.2E-44 320.0 37.7 394 94-498 3-410 (412)
7 KOG2532 Permease of the major 100.0 4.8E-39 1E-43 313.8 38.7 389 126-520 65-458 (466)
8 PRK11663 regulatory protein Uh 100.0 9.1E-39 2E-43 317.9 39.5 404 95-511 19-426 (434)
9 TIGR01299 synapt_SV2 synaptic 100.0 3.1E-37 6.7E-42 316.3 43.5 405 94-512 162-737 (742)
10 TIGR00893 2A0114 d-galactonate 100.0 2E-37 4.3E-42 306.3 39.1 394 108-507 3-397 (399)
11 PRK11551 putative 3-hydroxyphe 100.0 4.5E-37 9.8E-42 304.4 41.0 381 95-508 11-395 (406)
12 PLN00028 nitrate transmembrane 100.0 7E-37 1.5E-41 306.9 41.4 391 97-509 34-433 (476)
13 PRK11273 glpT sn-glycerol-3-ph 100.0 4.9E-37 1.1E-41 307.1 39.8 414 93-517 23-443 (452)
14 PRK09705 cynX putative cyanate 100.0 7.7E-37 1.7E-41 300.0 38.5 357 116-513 26-385 (393)
15 PRK10213 nepI ribonucleoside t 100.0 7.6E-36 1.6E-40 292.6 43.5 367 97-502 18-384 (394)
16 TIGR00903 2A0129 major facilit 100.0 1.3E-36 2.8E-41 293.5 37.0 359 111-506 3-362 (368)
17 COG2223 NarK Nitrate/nitrite t 100.0 6.1E-37 1.3E-41 281.9 31.1 387 93-512 8-404 (417)
18 PRK03699 putative transporter; 100.0 4.2E-36 9E-41 295.4 38.8 379 96-513 4-384 (394)
19 PRK10642 proline/glycine betai 100.0 6.9E-36 1.5E-40 301.6 40.9 394 98-513 15-434 (490)
20 PRK15034 nitrate/nitrite trans 100.0 1E-35 2.2E-40 288.2 39.9 383 93-513 28-458 (462)
21 TIGR00892 2A0113 monocarboxyla 100.0 2.9E-36 6.3E-41 300.9 36.3 395 95-504 15-416 (455)
22 PRK10406 alpha-ketoglutarate t 100.0 1.8E-35 3.9E-40 294.2 41.3 377 96-508 19-423 (432)
23 PRK15402 multidrug efflux syst 100.0 5.1E-35 1.1E-39 289.4 42.5 365 94-491 8-378 (406)
24 PRK10091 MFS transport protein 100.0 1.6E-35 3.4E-40 290.1 38.5 372 101-512 5-379 (382)
25 PRK12307 putative sialic acid 100.0 1.2E-35 2.6E-40 296.2 37.9 369 95-489 14-388 (426)
26 TIGR00890 2A0111 Oxalate/Forma 100.0 5.8E-36 1.2E-40 293.8 34.3 364 105-502 9-375 (377)
27 PRK14995 methyl viologen resis 100.0 2E-35 4.4E-40 298.3 37.2 375 96-482 3-412 (495)
28 TIGR00891 2A0112 putative sial 100.0 2.5E-35 5.5E-40 292.2 36.1 388 93-493 6-400 (405)
29 PRK09952 shikimate transporter 100.0 1E-33 2.2E-38 281.6 42.5 385 94-509 17-433 (438)
30 PRK10504 putative transporter; 100.0 6.4E-34 1.4E-38 287.2 40.8 373 100-485 11-417 (471)
31 PRK05122 major facilitator sup 100.0 5.6E-34 1.2E-38 281.5 39.6 371 98-513 14-393 (399)
32 TIGR00897 2A0118 polyol permea 100.0 9E-34 2E-38 279.5 40.5 375 104-508 18-400 (402)
33 TIGR00712 glpT glycerol-3-phos 100.0 2.1E-34 4.5E-39 287.2 36.1 402 97-511 25-435 (438)
34 PRK10489 enterobactin exporter 100.0 9.3E-35 2E-39 288.4 32.4 384 107-522 25-413 (417)
35 TIGR00881 2A0104 phosphoglycer 100.0 3E-35 6.5E-40 288.9 28.3 372 106-489 2-377 (379)
36 TIGR00710 efflux_Bcr_CflA drug 100.0 1.3E-33 2.9E-38 277.8 39.8 353 100-483 6-361 (385)
37 PRK15403 multidrug efflux syst 100.0 1.3E-33 2.8E-38 278.4 39.1 395 101-525 18-412 (413)
38 TIGR00899 2A0120 sugar efflux 100.0 1.5E-33 3.3E-38 276.4 38.7 366 106-508 4-373 (375)
39 TIGR00887 2A0109 phosphate:H+ 100.0 8.9E-34 1.9E-38 287.3 37.7 410 93-515 10-495 (502)
40 PRK15075 citrate-proton sympor 100.0 3.2E-33 7E-38 278.3 40.6 357 97-486 13-397 (434)
41 TIGR00900 2A0121 H+ Antiporter 100.0 5.9E-34 1.3E-38 278.2 34.3 354 104-485 4-365 (365)
42 PRK10133 L-fucose transporter; 100.0 5.4E-33 1.2E-37 275.3 40.5 370 97-500 24-424 (438)
43 PRK03893 putative sialic acid 100.0 2.6E-33 5.7E-38 284.9 39.1 386 95-498 16-442 (496)
44 TIGR00879 SP MFS transporter, 100.0 2.4E-34 5.3E-39 291.7 30.7 400 97-508 26-469 (481)
45 TIGR00711 efflux_EmrB drug res 100.0 1E-33 2.2E-38 287.3 35.1 373 100-484 3-411 (485)
46 PRK03633 putative MFS family t 100.0 9.6E-33 2.1E-37 270.5 39.5 360 100-504 7-367 (381)
47 PRK10473 multidrug efflux syst 100.0 1.8E-32 3.9E-37 270.0 40.5 355 103-498 7-363 (392)
48 PRK10077 xylE D-xylose transpo 100.0 5.5E-33 1.2E-37 281.4 36.0 396 95-508 8-456 (479)
49 PRK09874 drug efflux system pr 100.0 2.9E-32 6.3E-37 270.4 40.3 372 102-509 17-398 (408)
50 PRK11043 putative transporter; 100.0 6.5E-32 1.4E-36 266.8 42.0 350 101-485 8-359 (401)
51 PRK11652 emrD multidrug resist 100.0 1E-31 2.2E-36 264.8 42.6 354 97-484 6-361 (394)
52 PRK11102 bicyclomycin/multidru 100.0 5E-32 1.1E-36 265.6 38.9 363 114-508 6-371 (377)
53 TIGR00895 2A0115 benzoate tran 100.0 1.8E-32 4E-37 271.0 36.1 374 95-480 13-397 (398)
54 PRK12382 putative transporter; 100.0 4.2E-32 9.2E-37 267.3 38.4 364 101-508 17-388 (392)
55 PF07690 MFS_1: Major Facilita 100.0 2.7E-33 5.8E-38 272.2 28.5 346 105-474 2-352 (352)
56 PRK11646 multidrug resistance 100.0 1E-31 2.2E-36 264.0 38.3 353 116-506 27-385 (400)
57 PRK11195 lysophospholipid tran 100.0 8.2E-32 1.8E-36 264.1 36.9 373 104-511 8-382 (393)
58 KOG2504 Monocarboxylate transp 100.0 9E-33 2E-37 273.2 29.6 405 93-509 40-476 (509)
59 PRK15011 sugar efflux transpor 100.0 5E-31 1.1E-35 259.2 41.3 362 107-508 23-390 (393)
60 TIGR00902 2A0127 phenyl propri 100.0 2.3E-31 4.9E-36 260.5 38.5 361 104-504 9-374 (382)
61 PRK11010 ampG muropeptide tran 100.0 5.1E-31 1.1E-35 264.9 41.5 379 101-510 14-404 (491)
62 TIGR00886 2A0108 nitrite extru 100.0 2.8E-32 6E-37 266.4 31.3 347 102-469 4-365 (366)
63 TIGR00898 2A0119 cation transp 100.0 3.3E-32 7.3E-37 277.2 33.0 373 120-514 110-500 (505)
64 KOG2533 Permease of the major 100.0 4.2E-32 9.1E-37 265.4 30.6 293 91-387 37-336 (495)
65 cd06174 MFS The Major Facilita 100.0 3E-31 6.6E-36 257.6 36.6 346 103-506 3-349 (352)
66 TIGR00885 fucP L-fucose:H+ sym 100.0 4.9E-31 1.1E-35 259.0 38.0 365 101-499 5-402 (410)
67 KOG1330 Sugar transporter/spin 100.0 1.3E-33 2.7E-38 261.7 17.0 380 94-488 28-417 (493)
68 TIGR00896 CynX cyanate transpo 100.0 5.6E-31 1.2E-35 255.7 32.8 334 115-488 16-353 (355)
69 PRK10054 putative transporter; 100.0 9.5E-31 2.1E-35 256.7 34.3 360 106-503 14-378 (395)
70 PRK11128 putative 3-phenylprop 100.0 4.2E-30 9.2E-35 251.7 38.8 357 108-504 13-374 (382)
71 PF05977 MFS_3: Transmembrane 100.0 3.4E-30 7.3E-35 256.3 36.7 378 101-508 12-393 (524)
72 TIGR00883 2A0106 metabolite-pr 100.0 2.5E-30 5.4E-35 255.4 32.6 358 109-498 3-390 (394)
73 PRK11902 ampG muropeptide tran 100.0 2.9E-29 6.3E-34 247.6 40.0 374 104-508 4-389 (402)
74 PRK09528 lacY galactoside perm 100.0 9.2E-30 2E-34 252.8 33.3 379 106-513 17-407 (420)
75 COG2807 CynX Cyanate permease 100.0 6.7E-29 1.4E-33 223.6 34.6 372 98-508 11-384 (395)
76 COG0738 FucP Fucose permease [ 100.0 8.8E-29 1.9E-33 226.4 34.9 359 99-492 13-392 (422)
77 TIGR00882 2A0105 oligosacchari 100.0 2.1E-28 4.5E-33 241.2 37.1 376 102-506 5-392 (396)
78 KOG3764 Vesicular amine transp 100.0 2.1E-30 4.6E-35 234.9 20.1 345 129-508 101-453 (464)
79 TIGR00889 2A0110 nucleoside tr 100.0 2.9E-28 6.2E-33 240.5 35.8 370 104-512 7-405 (418)
80 PRK06814 acylglycerophosphoeth 100.0 6.3E-29 1.4E-33 276.6 33.2 370 104-499 20-412 (1140)
81 TIGR00805 oat sodium-independe 100.0 5.1E-29 1.1E-33 255.7 24.1 289 102-390 36-397 (633)
82 PRK08633 2-acyl-glycerophospho 100.0 1.1E-27 2.4E-32 267.9 36.2 356 116-497 27-398 (1146)
83 TIGR00901 2A0125 AmpG-related 100.0 1E-27 2.2E-32 233.0 30.8 320 116-467 5-355 (356)
84 TIGR00924 yjdL_sub1_fam amino 100.0 1.9E-26 4.1E-31 230.6 39.8 402 102-508 13-467 (475)
85 KOG0569 Permease of the major 100.0 3.7E-27 8.1E-32 227.3 32.6 405 99-516 11-462 (485)
86 TIGR02718 sider_RhtX_FptX side 100.0 2.6E-26 5.7E-31 225.8 38.7 371 101-504 3-386 (390)
87 TIGR00806 rfc RFC reduced fola 100.0 1.1E-26 2.4E-31 220.3 34.1 380 113-503 40-442 (511)
88 KOG0253 Synaptic vesicle trans 100.0 2.5E-27 5.4E-32 212.2 26.6 401 93-510 72-520 (528)
89 PRK10207 dipeptide/tripeptide 100.0 6.3E-26 1.4E-30 226.8 39.9 398 101-508 16-475 (489)
90 TIGR00792 gph sugar (Glycoside 100.0 2.9E-27 6.2E-32 236.7 29.3 335 121-485 22-382 (437)
91 KOG0254 Predicted transporter 100.0 8.1E-27 1.8E-31 236.5 30.6 408 98-519 44-494 (513)
92 KOG2615 Permease of the major 100.0 1.8E-26 3.9E-31 208.2 23.9 355 129-501 63-432 (451)
93 KOG0252 Inorganic phosphate tr 100.0 7.3E-28 1.6E-32 222.4 14.3 416 91-519 33-508 (538)
94 PTZ00207 hypothetical protein; 100.0 1.3E-24 2.8E-29 216.8 36.8 410 93-508 22-551 (591)
95 PF06609 TRI12: Fungal trichot 99.9 1.5E-24 3.3E-29 214.7 36.3 366 103-481 48-465 (599)
96 KOG4686 Predicted sugar transp 99.9 6.4E-27 1.4E-31 202.0 16.1 394 95-515 40-449 (459)
97 PF03825 Nuc_H_symport: Nucleo 99.9 1.4E-23 3.1E-28 203.1 37.4 370 105-508 8-394 (400)
98 KOG0255 Synaptic vesicle trans 99.9 2.1E-24 4.5E-29 220.3 30.6 368 126-514 110-498 (521)
99 PRK09584 tppB putative tripept 99.9 4.3E-23 9.3E-28 207.7 37.3 396 104-507 26-477 (500)
100 PF01306 LacY_symp: LacY proto 99.9 3.1E-23 6.8E-28 196.4 32.9 377 105-510 13-401 (412)
101 TIGR01301 GPH_sucrose GPH fami 99.9 4.1E-22 8.9E-27 195.1 35.6 379 108-510 13-472 (477)
102 PF11700 ATG22: Vacuole efflux 99.9 1.6E-21 3.5E-26 192.4 39.5 357 134-511 70-470 (477)
103 PRK09669 putative symporter Ya 99.9 2.4E-22 5.1E-27 200.9 32.3 334 121-485 32-390 (444)
104 KOG2563 Permease of the major 99.9 7.4E-23 1.6E-27 189.9 24.8 368 92-485 38-423 (480)
105 PF00083 Sugar_tr: Sugar (and 99.9 2E-29 4.3E-34 253.2 -22.0 402 105-521 6-449 (451)
106 PRK15462 dipeptide/tripeptide 99.9 2.1E-20 4.7E-25 183.8 39.4 391 103-501 13-469 (493)
107 TIGR00788 fbt folate/biopterin 99.9 2.2E-22 4.8E-27 200.8 25.2 382 98-499 25-433 (468)
108 TIGR01272 gluP glucose/galacto 99.9 4.2E-21 9.1E-26 181.0 29.6 277 187-496 8-302 (310)
109 PRK10429 melibiose:sodium symp 99.9 5.8E-21 1.3E-25 192.0 30.9 354 106-485 13-395 (473)
110 PRK09848 glucuronide transport 99.9 6.9E-21 1.5E-25 190.7 31.3 347 106-485 15-390 (448)
111 PF13347 MFS_2: MFS/sugar tran 99.9 6.1E-21 1.3E-25 189.8 25.1 335 120-485 23-386 (428)
112 COG2270 Permeases of the major 99.9 7.9E-20 1.7E-24 169.1 28.8 355 133-511 57-431 (438)
113 PRK11462 putative transporter; 99.9 6.9E-19 1.5E-23 175.7 35.4 332 121-485 32-389 (460)
114 COG2211 MelB Na+/melibiose sym 99.9 4.5E-19 9.8E-24 169.8 31.1 352 106-485 19-398 (467)
115 COG3104 PTR2 Dipeptide/tripept 99.8 5.1E-18 1.1E-22 160.9 29.9 402 102-508 24-486 (498)
116 KOG2325 Predicted transporter/ 99.8 6E-19 1.3E-23 169.2 23.1 392 95-508 30-474 (488)
117 PF03209 PUCC: PUCC protein; 99.8 5.7E-17 1.2E-21 151.0 32.8 355 125-508 6-397 (403)
118 KOG3626 Organic anion transpor 99.8 1.6E-18 3.5E-23 172.9 23.1 292 99-390 97-459 (735)
119 PF03137 OATP: Organic Anion T 99.8 8.2E-21 1.8E-25 190.0 -0.1 380 102-484 6-515 (539)
120 KOG2816 Predicted transporter 99.8 6.5E-16 1.4E-20 150.8 26.4 363 98-483 21-392 (463)
121 PF05631 DUF791: Protein of un 99.7 1.4E-14 3.1E-19 132.9 25.8 263 95-386 34-304 (354)
122 PF03092 BT1: BT1 family; Int 99.7 7.5E-15 1.6E-19 144.7 22.4 378 119-513 10-417 (433)
123 TIGR00880 2_A_01_02 Multidrug 99.6 2E-15 4.4E-20 125.3 11.7 138 139-278 3-140 (141)
124 TIGR00889 2A0110 nucleoside tr 99.6 6.5E-15 1.4E-19 145.6 17.1 160 120-279 229-405 (418)
125 PRK05122 major facilitator sup 99.6 9.4E-14 2E-18 137.3 20.7 157 120-280 237-393 (399)
126 TIGR00890 2A0111 Oxalate/Forma 99.6 2.3E-14 5.1E-19 140.4 16.0 149 120-268 226-374 (377)
127 PF01770 Folate_carrier: Reduc 99.6 1.3E-11 2.9E-16 116.8 33.1 343 119-472 24-391 (412)
128 PRK09528 lacY galactoside perm 99.6 2.3E-14 5E-19 142.5 14.4 150 128-279 256-406 (420)
129 PRK15011 sugar efflux transpor 99.6 2.1E-13 4.6E-18 134.2 19.6 153 120-275 237-390 (393)
130 TIGR00902 2A0127 phenyl propri 99.6 2.1E-13 4.5E-18 133.7 19.2 153 115-271 221-374 (382)
131 PRK11551 putative 3-hydroxyphe 99.6 1.4E-13 3.1E-18 136.4 18.2 157 117-275 238-395 (406)
132 TIGR01299 synapt_SV2 synaptic 99.6 2.5E-13 5.5E-18 140.6 19.6 138 138-279 599-736 (742)
133 PRK12382 putative transporter; 99.5 3.3E-13 7.1E-18 133.1 19.3 153 119-275 236-388 (392)
134 PRK10642 proline/glycine betai 99.5 8.9E-13 1.9E-17 133.5 22.2 168 114-282 265-435 (490)
135 PRK10489 enterobactin exporter 99.5 2.7E-13 5.9E-18 134.7 17.7 161 118-280 242-403 (417)
136 cd06174 MFS The Major Facilita 99.5 3.6E-13 7.7E-18 130.6 18.0 164 108-273 184-349 (352)
137 PRK09874 drug efflux system pr 99.5 1.6E-13 3.4E-18 136.2 15.5 159 117-277 237-399 (408)
138 TIGR00899 2A0120 sugar efflux 99.5 6.7E-13 1.5E-17 130.1 18.8 147 125-274 226-372 (375)
139 PRK10054 putative transporter; 99.5 1.2E-12 2.6E-17 128.7 20.0 173 324-507 7-180 (395)
140 PRK03633 putative MFS family t 99.5 1.5E-12 3.2E-17 127.8 20.2 150 120-274 221-370 (381)
141 PRK03545 putative arabinose tr 99.5 1.6E-12 3.4E-17 128.0 19.5 152 122-277 229-381 (390)
142 PRK09705 cynX putative cyanate 99.5 2.3E-12 5.1E-17 126.7 20.3 164 115-281 221-386 (393)
143 PRK09556 uhpT sugar phosphate 99.5 9E-13 1.9E-17 132.8 17.1 174 102-275 261-448 (467)
144 PRK03893 putative sialic acid 99.5 5.9E-13 1.3E-17 135.6 15.6 150 118-267 294-444 (496)
145 PRK03699 putative transporter; 99.5 1.4E-12 3E-17 128.5 17.4 156 116-274 222-378 (394)
146 TIGR00893 2A0114 d-galactonate 99.5 1.5E-12 3.3E-17 128.4 17.8 165 106-273 222-396 (399)
147 TIGR00892 2A0113 monocarboxyla 99.5 6E-13 1.3E-17 133.3 14.8 152 117-270 259-415 (455)
148 TIGR00883 2A0106 metabolite-pr 99.5 6.7E-13 1.5E-17 130.9 13.7 161 106-266 226-391 (394)
149 TIGR00879 SP MFS transporter, 99.5 2.3E-12 4.9E-17 130.7 17.7 182 99-280 284-474 (481)
150 TIGR00897 2A0118 polyol permea 99.5 4E-12 8.6E-17 125.6 18.5 165 109-275 232-400 (402)
151 KOG3762 Predicted transporter 99.4 1.7E-11 3.6E-16 117.1 21.0 182 316-508 363-546 (618)
152 PRK11663 regulatory protein Uh 99.4 6.3E-12 1.4E-16 125.4 19.1 170 109-278 253-426 (434)
153 TIGR00924 yjdL_sub1_fam amino 99.4 6.7E-12 1.5E-16 126.0 18.8 174 325-508 11-191 (475)
154 PRK11128 putative 3-phenylprop 99.4 8.9E-12 1.9E-16 122.3 19.0 146 120-269 226-372 (382)
155 PRK11010 ampG muropeptide tran 99.4 1.3E-10 2.8E-15 117.3 27.3 154 122-276 246-403 (491)
156 PRK11273 glpT sn-glycerol-3-ph 99.4 5.3E-12 1.1E-16 126.7 16.9 160 116-275 270-434 (452)
157 COG2814 AraJ Arabinose efflux 99.4 1.5E-11 3.3E-16 116.0 18.6 164 110-276 223-386 (394)
158 PRK11646 multidrug resistance 99.4 2E-11 4.3E-16 120.3 20.3 169 327-506 13-182 (400)
159 TIGR00891 2A0112 putative sial 99.4 3.3E-12 7.1E-17 126.6 14.4 138 121-260 260-400 (405)
160 PRK12307 putative sialic acid 99.4 6.7E-12 1.5E-16 125.2 16.4 143 118-260 250-392 (426)
161 COG2271 UhpC Sugar phosphate p 99.4 4.7E-12 1E-16 117.8 13.8 176 326-512 31-209 (448)
162 PRK15462 dipeptide/tripeptide 99.4 2.1E-11 4.6E-16 120.6 19.4 174 324-507 9-187 (493)
163 TIGR00769 AAA ADP/ATP carrier 99.4 9.4E-09 2E-13 100.8 37.5 275 99-390 7-333 (472)
164 PF07690 MFS_1: Major Facilita 99.4 1.4E-11 3.1E-16 119.5 17.8 164 331-504 3-167 (352)
165 TIGR00900 2A0121 H+ Antiporter 99.4 2.4E-11 5.3E-16 118.5 18.6 170 328-508 3-178 (365)
166 PF05977 MFS_3: Transmembrane 99.4 2.4E-11 5.3E-16 121.8 17.9 154 118-273 237-391 (524)
167 PRK10504 putative transporter; 99.4 6.2E-11 1.4E-15 119.9 21.1 174 324-508 10-184 (471)
168 PRK09584 tppB putative tripept 99.4 7.1E-11 1.5E-15 119.4 21.2 179 319-507 15-199 (500)
169 PRK10077 xylE D-xylose transpo 99.4 1.8E-11 3.9E-16 124.2 16.9 164 117-280 289-461 (479)
170 PF06813 Nodulin-like: Nodulin 99.4 2.1E-10 4.6E-15 102.4 21.2 175 97-275 1-181 (250)
171 TIGR00882 2A0105 oligosacchari 99.3 2.3E-11 4.9E-16 120.1 16.3 143 130-274 250-393 (396)
172 TIGR00710 efflux_Bcr_CflA drug 99.3 4.5E-11 9.6E-16 117.6 18.3 165 333-508 14-179 (385)
173 TIGR02718 sider_RhtX_FptX side 99.3 3.4E-11 7.4E-16 118.5 17.4 150 121-270 230-385 (390)
174 TIGR00895 2A0115 benzoate tran 99.3 8.7E-12 1.9E-16 123.2 13.3 140 107-248 258-397 (398)
175 PRK09952 shikimate transporter 99.3 5.9E-11 1.3E-15 118.5 19.1 152 124-275 276-432 (438)
176 PRK10091 MFS transport protein 99.3 7.5E-11 1.6E-15 115.7 19.4 171 324-505 3-174 (382)
177 PRK10213 nepI ribonucleoside t 99.3 1.2E-10 2.6E-15 114.5 20.5 155 338-503 34-189 (394)
178 PF11700 ATG22: Vacuole efflux 99.3 1.1E-10 2.5E-15 115.7 19.0 175 99-275 281-467 (477)
179 KOG2504 Monocarboxylate transp 99.3 1.5E-11 3.3E-16 122.6 12.6 176 99-276 298-476 (509)
180 TIGR00711 efflux_EmrB drug res 99.3 1.4E-10 3.1E-15 117.9 19.9 170 328-508 6-176 (485)
181 PRK14995 methyl viologen resis 99.3 3.6E-10 7.7E-15 114.7 22.3 170 327-508 9-181 (495)
182 PRK10473 multidrug efflux syst 99.3 3.1E-10 6.8E-15 111.9 21.1 170 328-508 7-177 (392)
183 TIGR00887 2A0109 phosphate:H+ 99.3 4.2E-11 9.1E-16 121.8 15.3 163 117-280 306-492 (502)
184 PRK10207 dipeptide/tripeptide 99.3 1.4E-10 2.9E-15 116.7 18.7 175 324-508 14-193 (489)
185 KOG3098 Uncharacterized conser 99.3 2.4E-09 5.3E-14 103.4 26.0 316 140-480 56-411 (461)
186 PF01306 LacY_symp: LacY proto 99.3 1.1E-10 2.4E-15 111.4 16.8 168 111-281 237-405 (412)
187 TIGR00712 glpT glycerol-3-phos 99.3 7.1E-11 1.5E-15 118.1 16.3 163 117-279 269-436 (438)
188 TIGR00792 gph sugar (Glycoside 99.3 6.1E-11 1.3E-15 118.8 15.8 123 132-255 255-384 (437)
189 PRK11043 putative transporter; 99.3 2.8E-10 6E-15 112.6 20.2 163 337-509 16-181 (401)
190 TIGR00886 2A0108 nitrite extru 99.3 2E-10 4.3E-15 112.2 18.8 148 325-482 2-151 (366)
191 TIGR01272 gluP glucose/galacto 99.3 2.6E-10 5.7E-15 107.7 18.8 157 103-264 144-303 (310)
192 TIGR02332 HpaX 4-hydroxyphenyl 99.3 3E-10 6.5E-15 112.4 20.1 167 329-506 13-186 (412)
193 PRK15075 citrate-proton sympor 99.3 1.7E-10 3.6E-15 115.2 18.5 144 112-255 251-398 (434)
194 TIGR00903 2A0129 major facilit 99.3 2.5E-10 5.3E-15 110.7 19.0 160 338-508 5-164 (368)
195 PF06963 FPN1: Ferroportin1 (F 99.3 4.6E-09 1E-13 101.7 27.2 371 101-476 4-411 (432)
196 TIGR00881 2A0104 phosphoglycer 99.3 7.8E-11 1.7E-15 115.5 14.9 150 109-258 226-379 (379)
197 TIGR00926 2A1704 Peptide:H+ sy 99.3 8.7E-09 1.9E-13 105.9 30.0 158 119-276 8-182 (654)
198 PRK15402 multidrug efflux syst 99.3 1.8E-10 3.9E-15 114.1 17.2 154 122-276 238-395 (406)
199 PRK11102 bicyclomycin/multidru 99.3 2.7E-10 5.9E-15 111.7 17.6 157 340-507 7-164 (377)
200 PRK11195 lysophospholipid tran 99.2 3.7E-10 8E-15 111.0 18.4 171 323-508 2-173 (393)
201 PLN00028 nitrate transmembrane 99.2 9.8E-10 2.1E-14 110.8 21.4 163 334-509 46-219 (476)
202 PRK11902 ampG muropeptide tran 99.2 4.5E-10 9.8E-15 111.0 18.0 148 122-274 233-388 (402)
203 PRK11652 emrD multidrug resist 99.2 9.5E-10 2.1E-14 108.5 19.8 165 329-504 13-178 (394)
204 PF03825 Nuc_H_symport: Nucleo 99.2 7.2E-10 1.6E-14 107.9 18.3 167 110-277 218-396 (400)
205 KOG3574 Acetyl-CoA transporter 99.2 2.7E-09 5.9E-14 97.5 20.2 363 97-485 29-433 (510)
206 TIGR00896 CynX cyanate transpo 99.2 4.4E-10 9.5E-15 109.2 16.4 134 117-253 215-350 (355)
207 COG2223 NarK Nitrate/nitrite t 99.2 2.7E-10 5.9E-15 106.4 13.9 174 101-275 220-400 (417)
208 PRK10406 alpha-ketoglutarate t 99.2 9.7E-10 2.1E-14 109.7 19.0 156 118-274 262-422 (432)
209 PRK15403 multidrug efflux syst 99.2 1.5E-09 3.2E-14 107.4 20.0 155 341-506 33-188 (413)
210 KOG0637 Sucrose transporter an 99.2 3.4E-10 7.4E-15 106.3 14.0 271 108-390 41-362 (498)
211 PF02487 CLN3: CLN3 protein; 99.2 3.3E-08 7.2E-13 94.0 27.4 324 136-479 61-393 (402)
212 PRK15034 nitrate/nitrite trans 99.2 1.8E-09 3.8E-14 105.9 19.3 146 323-479 33-185 (462)
213 TIGR00898 2A0119 cation transp 99.2 2E-10 4.3E-15 117.3 13.3 137 140-279 361-497 (505)
214 KOG4332 Predicted sugar transp 99.2 1.1E-09 2.3E-14 95.3 15.1 357 115-504 53-426 (454)
215 PRK09848 glucuronide transport 99.2 1.1E-09 2.3E-14 110.0 16.7 136 119-254 248-391 (448)
216 KOG0569 Permease of the major 99.1 7.6E-10 1.7E-14 107.9 14.6 185 98-283 269-461 (485)
217 TIGR00885 fucP L-fucose:H+ sym 99.1 8E-09 1.7E-13 101.9 21.5 146 326-481 5-154 (410)
218 COG2270 Permeases of the major 99.1 1.3E-09 2.8E-14 102.0 14.3 147 123-271 277-424 (438)
219 PRK08633 2-acyl-glycerophospho 99.1 1.4E-09 3E-14 122.6 16.5 143 123-267 257-401 (1146)
220 TIGR00806 rfc RFC reduced fola 99.1 1.1E-08 2.4E-13 98.6 19.7 158 343-511 44-205 (511)
221 TIGR00894 2A0114euk Na(+)-depe 99.1 1.3E-09 2.8E-14 110.0 13.7 173 101-275 263-449 (465)
222 KOG3810 Micronutrient transpor 99.1 5.2E-09 1.1E-13 94.6 15.3 365 129-511 36-423 (433)
223 PRK10133 L-fucose transporter; 99.1 2E-08 4.4E-13 100.0 21.3 146 326-481 28-177 (438)
224 PRK10429 melibiose:sodium symp 99.1 5.9E-09 1.3E-13 105.2 17.5 139 116-254 248-396 (473)
225 KOG1330 Sugar transporter/spin 99.1 2E-10 4.2E-15 108.3 5.6 174 328-511 37-211 (493)
226 PF13347 MFS_2: MFS/sugar tran 99.0 4.6E-09 1E-13 104.7 15.8 151 105-255 231-388 (428)
227 KOG0253 Synaptic vesicle trans 99.0 1.8E-09 3.9E-14 98.4 11.3 131 143-279 390-522 (528)
228 KOG4686 Predicted sugar transp 99.0 6.7E-09 1.5E-13 91.3 14.4 172 98-275 266-441 (459)
229 KOG3764 Vesicular amine transp 99.0 1.3E-09 2.9E-14 100.6 10.4 149 355-513 101-251 (464)
230 PRK09669 putative symporter Ya 99.0 5.2E-09 1.1E-13 104.9 15.1 122 133-254 263-391 (444)
231 TIGR00880 2_A_01_02 Multidrug 99.0 8.8E-09 1.9E-13 85.0 13.5 133 366-508 4-137 (141)
232 PTZ00207 hypothetical protein; 99.0 4.5E-08 9.7E-13 98.9 20.8 157 339-508 42-204 (591)
233 PRK06814 acylglycerophosphoeth 99.0 1.9E-08 4.1E-13 113.1 20.1 183 319-508 6-194 (1140)
234 TIGR01301 GPH_sucrose GPH fami 99.0 1.9E-08 4.1E-13 99.4 17.3 176 326-510 6-219 (477)
235 COG3104 PTR2 Dipeptide/tripept 99.0 9.9E-09 2.1E-13 98.4 13.8 182 320-511 16-208 (498)
236 COG2807 CynX Cyanate permease 99.0 5.4E-08 1.2E-12 89.3 17.2 177 93-276 206-385 (395)
237 KOG2615 Permease of the major 98.9 6.9E-09 1.5E-13 95.3 10.9 126 356-491 64-193 (451)
238 COG0477 ProP Permeases of the 98.9 4.1E-08 8.9E-13 93.2 16.8 158 109-268 12-177 (338)
239 TIGR00901 2A0125 AmpG-related 98.9 8.4E-08 1.8E-12 93.3 18.0 156 342-508 6-177 (356)
240 TIGR00805 oat sodium-independe 98.9 1.3E-08 2.7E-13 105.6 12.6 155 345-509 54-281 (633)
241 KOG3762 Predicted transporter 98.9 8.1E-09 1.8E-13 99.1 8.8 152 123-276 395-547 (618)
242 COG2211 MelB Na+/melibiose sym 98.8 3E-07 6.4E-12 89.2 19.1 158 94-254 234-399 (467)
243 PF03219 TLC: TLC ATP/ADP tran 98.8 2.8E-05 6.1E-10 77.1 32.5 280 97-390 22-349 (491)
244 TIGR00788 fbt folate/biopterin 98.8 8.1E-08 1.8E-12 96.4 15.1 127 127-253 281-415 (468)
245 PRK11462 putative transporter; 98.8 2.1E-07 4.6E-12 93.3 17.9 123 132-254 261-390 (460)
246 PF06609 TRI12: Fungal trichot 98.8 4.9E-07 1.1E-11 91.0 20.0 176 322-510 38-218 (599)
247 PF13000 Acatn: Acetyl-coenzym 98.8 4E-06 8.6E-11 80.6 24.2 282 102-390 3-339 (544)
248 COG3202 ATP/ADP translocase [E 98.8 0.00019 4.1E-09 69.3 34.5 279 97-390 25-352 (509)
249 PF03209 PUCC: PUCC protein; 98.7 1E-06 2.2E-11 83.1 17.3 155 119-273 228-395 (403)
250 COG0738 FucP Fucose permease [ 98.7 4.5E-07 9.7E-12 84.7 14.6 164 101-269 238-402 (422)
251 KOG2532 Permease of the major 98.7 1.5E-07 3.2E-12 93.0 11.3 176 99-276 258-447 (466)
252 PF06779 DUF1228: Protein of u 98.6 1.5E-07 3.2E-12 67.8 6.7 80 111-192 4-83 (85)
253 KOG1237 H+/oligopeptide sympor 98.6 6.9E-05 1.5E-09 76.0 27.5 158 117-274 56-243 (571)
254 PF06813 Nodulin-like: Nodulin 98.6 2.7E-06 5.8E-11 76.3 15.2 159 338-509 16-182 (250)
255 PF05978 UNC-93: Ion channel r 98.5 4.4E-06 9.6E-11 69.0 14.7 109 138-249 41-149 (156)
256 KOG0252 Inorganic phosphate tr 98.5 3.9E-07 8.4E-12 86.2 9.1 178 97-280 302-501 (538)
257 PF00083 Sugar_tr: Sugar (and 98.5 1.6E-09 3.4E-14 109.1 -7.6 164 116-281 270-441 (451)
258 KOG0254 Predicted transporter 98.4 1.3E-05 2.8E-10 81.9 18.2 182 99-281 295-488 (513)
259 PF12832 MFS_1_like: MFS_1 lik 98.4 1.6E-06 3.5E-11 62.1 7.7 71 104-174 5-75 (77)
260 KOG0255 Synaptic vesicle trans 98.4 2.3E-06 4.9E-11 87.8 11.1 144 355-511 113-257 (521)
261 KOG2533 Permease of the major 98.3 2.6E-06 5.7E-11 84.6 8.5 162 98-261 272-441 (495)
262 PF00854 PTR2: POT family; In 98.2 1.3E-05 2.8E-10 78.2 12.1 111 165-275 2-122 (372)
263 PF05631 DUF791: Protein of un 98.2 0.00026 5.6E-09 66.0 19.0 148 350-508 60-215 (354)
264 KOG3880 Predicted small molecu 98.1 4E-05 8.7E-10 68.7 11.8 326 136-479 64-400 (409)
265 KOG2816 Predicted transporter 98.1 0.00019 4.1E-09 71.0 17.0 126 122-250 265-391 (463)
266 PF12832 MFS_1_like: MFS_1 lik 98.0 4.1E-05 8.9E-10 54.9 8.5 62 328-390 4-65 (77)
267 PF07672 MFS_Mycoplasma: Mycop 98.0 0.00029 6.2E-09 62.4 14.6 101 221-337 2-107 (267)
268 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.0003 6.6E-09 72.9 16.1 162 339-508 2-181 (654)
269 KOG1479 Nucleoside transporter 97.9 0.00079 1.7E-08 64.1 17.3 120 100-222 19-149 (406)
270 TIGR00939 2a57 Equilibrative N 97.8 0.0032 7E-08 62.2 19.3 52 188-244 105-156 (437)
271 PF03092 BT1: BT1 family; Int 97.7 0.00084 1.8E-08 66.7 14.2 157 345-510 10-176 (433)
272 PF02487 CLN3: CLN3 protein; 97.6 0.0012 2.7E-08 63.3 13.6 139 103-248 251-394 (402)
273 PRK03612 spermidine synthase; 97.6 0.0075 1.6E-07 61.1 19.9 166 330-501 20-190 (521)
274 KOG3097 Predicted membrane pro 97.6 0.03 6.5E-07 51.4 20.8 70 146-218 70-139 (390)
275 KOG2325 Predicted transporter/ 97.5 0.0008 1.7E-08 66.0 11.2 175 327-508 37-228 (488)
276 PRK03612 spermidine synthase; 97.5 0.0052 1.1E-07 62.3 17.3 142 127-270 43-191 (521)
277 PF05978 UNC-93: Ion channel r 97.2 0.035 7.6E-07 46.0 15.6 107 364-480 41-148 (156)
278 KOG2563 Permease of the major 97.2 0.00074 1.6E-08 64.6 6.0 175 104-278 271-452 (480)
279 PF06963 FPN1: Ferroportin1 (F 97.2 0.0042 9.1E-08 60.8 11.4 148 101-248 260-415 (432)
280 PF01770 Folate_carrier: Reduc 97.1 0.032 6.8E-07 53.9 16.4 159 343-511 22-184 (412)
281 TIGR00769 AAA ADP/ATP carrier 97.0 0.1 2.2E-06 52.0 19.5 145 325-481 8-189 (472)
282 KOG4830 Predicted sugar transp 96.8 0.0007 1.5E-08 59.3 2.4 65 316-380 193-257 (412)
283 KOG3626 Organic anion transpor 96.6 0.01 2.2E-07 61.2 9.5 164 341-513 113-347 (735)
284 PF06779 DUF1228: Protein of u 96.6 0.014 3E-07 42.3 7.5 76 337-422 5-80 (85)
285 TIGR00939 2a57 Equilibrative N 96.6 0.08 1.7E-06 52.5 15.0 111 137-248 310-431 (437)
286 KOG3098 Uncharacterized conser 96.5 0.13 2.7E-06 50.8 15.8 106 141-247 286-410 (461)
287 COG0477 ProP Permeases of the 96.4 0.28 6.1E-06 45.8 17.9 138 338-483 16-158 (338)
288 PF03137 OATP: Organic Anion T 96.4 0.00052 1.1E-08 69.7 -1.6 165 338-511 16-252 (539)
289 KOG2601 Iron transporter [Inor 95.1 0.27 5.8E-06 46.3 10.4 166 102-267 30-217 (503)
290 KOG1479 Nucleoside transporter 94.9 1.4 3E-05 42.5 15.3 178 327-508 21-203 (406)
291 PF00854 PTR2: POT family; In 94.1 0.47 1E-05 46.3 10.7 71 437-508 48-122 (372)
292 PF01733 Nucleoside_tran: Nucl 94.0 0.018 3.9E-07 54.4 0.5 110 138-247 186-306 (309)
293 KOG0637 Sucrose transporter an 93.8 0.2 4.4E-06 48.5 7.0 144 327-479 35-201 (498)
294 PF01733 Nucleoside_tran: Nucl 93.7 0.021 4.6E-07 53.9 0.4 42 197-243 5-46 (309)
295 PF13000 Acatn: Acetyl-coenzym 93.0 1 2.2E-05 44.5 10.4 66 191-256 407-472 (544)
296 KOG3880 Predicted small molecu 92.6 0.73 1.6E-05 42.3 8.2 144 102-248 254-401 (409)
297 KOG4332 Predicted sugar transp 91.9 3.3 7.2E-05 37.4 11.3 136 136-271 284-426 (454)
298 KOG3574 Acetyl-CoA transporter 91.6 6.7 0.00015 37.6 13.4 66 324-393 31-101 (510)
299 COG4262 Predicted spermidine s 90.6 15 0.00033 34.6 18.0 143 130-274 39-189 (508)
300 KOG1237 H+/oligopeptide sympor 90.4 5.8 0.00013 40.9 13.2 169 331-508 44-244 (571)
301 KOG2601 Iron transporter [Inor 88.6 5.1 0.00011 38.1 10.1 159 325-485 28-203 (503)
302 COG3202 ATP/ADP translocase [E 87.0 35 0.00076 34.1 18.5 43 442-484 168-211 (509)
303 PF06912 DUF1275: Protein of u 85.5 25 0.00053 30.9 16.3 43 221-264 158-200 (209)
304 COG4262 Predicted spermidine s 84.0 39 0.00086 32.1 15.6 37 349-385 32-68 (508)
305 KOG3810 Micronutrient transpor 83.0 11 0.00024 35.7 9.3 94 137-232 274-369 (433)
306 PF07857 DUF1632: CEO family ( 82.5 16 0.00035 33.1 10.0 25 330-354 184-208 (254)
307 COG5336 Uncharacterized protei 80.8 6.5 0.00014 29.6 5.6 33 453-485 38-70 (116)
308 PF00909 Ammonium_transp: Ammo 80.1 64 0.0014 31.8 14.9 30 221-250 107-136 (399)
309 COG5336 Uncharacterized protei 79.5 7.7 0.00017 29.2 5.7 36 140-175 48-84 (116)
310 TIGR00844 c_cpa1 na(+)/h(+) an 78.2 1E+02 0.0022 33.1 26.4 36 230-265 106-141 (810)
311 PF02990 EMP70: Endomembrane p 78.0 45 0.00097 34.2 12.9 68 318-387 252-320 (521)
312 PF07672 MFS_Mycoplasma: Mycop 77.7 19 0.0004 32.7 8.7 104 137-241 144-258 (267)
313 PRK10263 DNA translocase FtsK; 77.2 50 0.0011 37.4 13.3 23 368-390 60-82 (1355)
314 PRK00293 dipZ thiol:disulfide 74.1 1.2E+02 0.0025 31.7 21.1 31 358-388 323-353 (571)
315 PF02990 EMP70: Endomembrane p 63.7 81 0.0017 32.4 11.0 34 360-393 297-330 (521)
316 PF03219 TLC: TLC ATP/ADP tran 63.6 1.8E+02 0.0038 29.7 27.0 38 350-389 168-205 (491)
317 PF05255 UPF0220: Uncharacteri 63.3 76 0.0016 26.7 8.8 58 217-274 14-77 (166)
318 PF02694 UPF0060: Uncharacteri 61.5 18 0.00039 27.4 4.3 52 133-184 53-104 (107)
319 KOG3814 Signaling protein van 60.5 1.1E+02 0.0025 29.1 10.0 13 187-199 203-215 (531)
320 PF11947 DUF3464: Protein of u 60.0 49 0.0011 27.2 6.9 28 445-472 118-145 (153)
321 PTZ00370 STEVOR; Provisional 60.0 8.4 0.00018 34.9 2.8 38 483-520 253-290 (296)
322 PRK13629 threonine/serine tran 59.8 1.9E+02 0.0041 28.8 17.3 40 220-264 19-58 (443)
323 PRK10263 DNA translocase FtsK; 58.9 1.2E+02 0.0026 34.6 11.5 19 236-254 142-160 (1355)
324 KOG2765 Predicted membrane pro 57.0 1.6E+02 0.0034 28.4 10.4 34 136-171 188-221 (416)
325 PRK02237 hypothetical protein; 56.0 30 0.00066 26.3 4.7 51 134-184 56-106 (109)
326 TIGR00836 amt ammonium transpo 55.9 2.1E+02 0.0046 28.2 15.4 19 373-391 235-253 (403)
327 PF12805 FUSC-like: FUSC-like 54.2 66 0.0014 29.9 8.0 35 169-204 4-38 (284)
328 PF02535 Zip: ZIP Zinc transpo 53.9 2E+02 0.0042 27.1 14.1 30 190-219 261-291 (317)
329 PF03596 Cad: Cadmium resistan 52.7 92 0.002 26.9 7.8 11 343-353 113-123 (191)
330 KOG2881 Predicted membrane pro 51.3 1.9E+02 0.0041 26.2 13.4 21 371-391 251-271 (294)
331 PF07760 DUF1616: Protein of u 49.2 1.8E+02 0.004 27.0 10.0 82 192-275 22-107 (287)
332 PF11947 DUF3464: Protein of u 48.4 96 0.0021 25.6 6.9 32 133-164 95-126 (153)
333 PRK00187 multidrug efflux prot 48.4 3E+02 0.0066 27.7 31.5 12 153-164 69-80 (464)
334 COG1230 CzcD Co/Zn/Cd efflux s 47.6 2.4E+02 0.0052 26.3 13.8 81 95-181 21-104 (296)
335 PF11299 DUF3100: Protein of u 47.2 46 0.001 29.4 5.1 53 195-248 177-229 (241)
336 COG3619 Predicted membrane pro 45.5 2.2E+02 0.0048 25.3 19.6 31 133-163 54-84 (226)
337 PF03547 Mem_trans: Membrane t 45.1 3E+02 0.0066 26.8 20.5 18 318-335 239-256 (385)
338 TIGR01666 YCCS hypothetical me 44.6 1.2E+02 0.0027 32.3 8.9 50 155-205 44-97 (704)
339 TIGR01667 YCCS_YHJK integral m 43.9 1.1E+02 0.0023 32.9 8.3 51 154-205 43-97 (701)
340 TIGR03644 marine_trans_1 proba 43.7 3.3E+02 0.0072 26.9 17.8 18 373-390 249-266 (404)
341 COG1268 BioY Uncharacterized c 42.3 84 0.0018 26.9 5.9 24 141-164 89-112 (184)
342 PF02632 BioY: BioY family; I 41.8 98 0.0021 25.5 6.1 41 141-181 60-100 (148)
343 COG1457 CodB Purine-cytosine p 41.4 3.8E+02 0.0082 26.8 23.2 147 215-390 11-158 (442)
344 PF03547 Mem_trans: Membrane t 40.0 2.9E+02 0.0063 26.9 10.5 17 371-387 6-22 (385)
345 TIGR01478 STEVOR variant surfa 39.9 38 0.00083 30.8 3.7 33 485-517 259-291 (295)
346 PRK10995 inner membrane protei 38.1 2.7E+02 0.006 24.7 8.9 65 441-505 26-90 (221)
347 COG2962 RarD Predicted permeas 36.0 3.6E+02 0.0078 25.0 11.5 33 316-348 61-93 (293)
348 PF11299 DUF3100: Protein of u 36.0 96 0.0021 27.5 5.4 34 352-385 131-164 (241)
349 PF01914 MarC: MarC family int 36.0 3E+02 0.0065 24.1 9.6 63 441-503 22-84 (203)
350 PF06645 SPC12: Microsomal sig 35.0 53 0.0012 23.4 3.1 31 471-504 21-51 (76)
351 COG2274 SunT ABC-type bacterio 34.9 6.1E+02 0.013 27.3 12.6 20 487-506 293-312 (709)
352 PF09527 ATPase_gene1: Putativ 31.5 1.5E+02 0.0032 19.3 5.8 36 142-177 8-44 (55)
353 COG4769 Predicted membrane pro 30.7 89 0.0019 25.9 4.0 51 144-202 83-133 (181)
354 PF05297 Herpes_LMP1: Herpesvi 29.5 18 0.00039 32.6 0.0 12 498-509 175-186 (381)
355 PF10183 ESSS: ESSS subunit of 28.9 79 0.0017 24.2 3.4 31 250-280 55-85 (105)
356 PF13386 DsbD_2: Cytochrome C 28.6 3.9E+02 0.0084 23.1 17.1 35 356-390 146-180 (199)
357 PF11023 DUF2614: Protein of u 28.5 2.8E+02 0.006 21.4 6.8 35 398-432 12-46 (114)
358 KOG1307 K+-dependent Ca2+/Na+ 28.1 90 0.0019 30.8 4.3 37 125-163 450-486 (588)
359 PF11872 DUF3392: Protein of u 27.1 2.9E+02 0.0063 21.2 6.3 37 319-355 43-80 (106)
360 PRK10599 calcium/sodium:proton 26.8 4.5E+02 0.0097 25.5 8.7 26 115-140 238-263 (366)
361 TIGR02230 ATPase_gene1 F0F1-AT 26.5 2.8E+02 0.006 21.1 5.8 29 148-176 56-85 (100)
362 COG1742 Uncharacterized conser 26.0 73 0.0016 24.0 2.6 53 132-184 53-105 (109)
363 PF12670 DUF3792: Protein of u 25.7 3.2E+02 0.007 21.2 9.3 44 125-171 28-71 (116)
364 COG1811 Uncharacterized membra 25.7 2.8E+02 0.0062 24.3 6.4 55 373-436 16-70 (228)
365 PRK02935 hypothetical protein; 25.1 3.1E+02 0.0067 20.8 7.2 36 398-433 13-48 (110)
366 PF03596 Cad: Cadmium resistan 24.7 2.7E+02 0.0059 24.1 6.3 47 116-165 111-166 (191)
367 PF04226 Transgly_assoc: Trans 24.1 2E+02 0.0043 18.3 5.2 32 240-271 6-41 (48)
368 PRK10712 PTS system fructose-s 23.5 7.1E+02 0.015 25.9 10.0 23 247-269 229-251 (563)
369 COG0786 GltS Na+/glutamate sym 23.4 5.9E+02 0.013 24.9 8.6 106 135-253 280-389 (404)
370 KOG3097 Predicted membrane pro 23.1 6.8E+02 0.015 24.1 10.5 60 324-390 29-88 (390)
371 PF11833 DUF3353: Protein of u 23.1 5E+02 0.011 22.5 8.6 31 220-250 136-166 (194)
372 PF00909 Ammonium_transp: Ammo 22.5 7.5E+02 0.016 24.4 11.6 48 197-244 278-325 (399)
373 PF10225 DUF2215: Uncharacteri 22.5 5.8E+02 0.013 23.2 8.3 53 187-243 32-84 (249)
374 PF04281 Tom22: Mitochondrial 22.2 3.2E+02 0.007 22.1 5.8 25 213-237 59-83 (137)
375 COG2095 MarC Multiple antibiot 22.2 3.7E+02 0.0081 23.5 6.7 68 441-508 25-92 (203)
376 PF11151 DUF2929: Protein of u 22.1 2.5E+02 0.0054 18.7 5.6 39 235-273 12-50 (57)
377 PRK11111 hypothetical protein; 21.9 5.6E+02 0.012 22.6 9.0 64 441-504 28-91 (214)
378 PF04474 DUF554: Protein of un 21.8 3.7E+02 0.008 24.0 6.6 57 371-436 13-69 (226)
379 KOG1278 Endosomal membrane pro 21.8 1E+02 0.0022 31.2 3.5 33 357-389 356-388 (628)
380 COG0387 ChaA Ca2+/H+ antiporte 21.7 6.4E+02 0.014 24.4 8.5 25 117-141 239-263 (368)
381 KOG2887 Membrane protein invol 21.5 5E+02 0.011 21.9 9.9 63 155-225 100-163 (175)
382 COG0534 NorM Na+-driven multid 21.5 8.4E+02 0.018 24.5 34.1 21 144-164 67-87 (455)
383 PF12273 RCR: Chitin synthesis 21.3 49 0.0011 26.5 1.1 13 255-267 1-13 (130)
384 PF06027 DUF914: Eukaryotic pr 21.2 6.1E+02 0.013 24.3 8.5 32 475-507 274-305 (334)
385 COG4721 ABC-type cobalt transp 21.0 5E+02 0.011 21.7 13.7 99 100-208 12-110 (192)
386 TIGR00814 stp serine transport 20.3 8.4E+02 0.018 24.0 19.2 26 220-245 3-28 (397)
387 PF06638 Strabismus: Strabismu 20.2 4.3E+02 0.0093 26.7 7.2 12 187-198 179-190 (505)
388 KOG2262 Sexual differentiation 20.2 4.5E+02 0.0096 27.7 7.5 14 193-206 187-200 (761)
389 PF04341 DUF485: Protein of un 20.1 3.7E+02 0.008 19.8 7.7 52 316-367 6-59 (91)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-43 Score=324.38 Aligned_cols=412 Identities=20% Similarity=0.248 Sum_probs=333.8
Q ss_pred cccccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHH
Q 009757 90 LEFITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW 169 (526)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 169 (526)
++..+++|++++..+++++...++.+..++.+.|.+.++.++|.+|+|++.+++.+.+.++.++.|.++||.++|+.+.+
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 34456778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHH--HH
Q 009757 170 GVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS--PI 247 (526)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~--~~ 247 (526)
++++.++..++++++ ++.+.+.++.++.|..+|.-+|++...+..|+++++||+..++++++-++|..+.|++. ++
T Consensus 100 gLilsai~nil~Gfs--~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 100 GLILSAIVNILFGFS--PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred HHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999999999999999999999999 88
Q ss_pred HHhhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCC-CCCCCchHHHHHcCchH
Q 009757 248 LMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHK-PATVIPPFRRLLSKMPT 326 (526)
Q Consensus 248 l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 326 (526)
+..+.+||..|++.++++++..+..++..+|+|++..-.+-+|-.....+..+ ++++.+ ......-++.+++||.+
T Consensus 178 ~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~---~~~~~~~ls~~~i~~~YVL~Nk~i 254 (448)
T COG2271 178 FAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYE---EEKENEGLTAWQIFVKYVLKNKLI 254 (448)
T ss_pred HHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhh---hhccCCCccHHHHHHHHHHcChHH
Confidence 88888999999999999999999999999999987654333322110000000 011111 11112234678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHH
Q 009757 327 WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF 406 (526)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 406 (526)
|.+++..++.+..-+++..|.|.|+.|..|+|...+++..+.+-.+++.|++++||++||+.+.+ |.....+.+
T Consensus 255 W~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~ 328 (448)
T COG2271 255 WLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFM 328 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999986331 223444444
Q ss_pred HHHHHHHHhhccCchh-HHHHHHHHHHHHHHhhhhh-hHHHHHHhhcc-cchhhHHHHHHHHHhH-HHHHHHHHHhhhcc
Q 009757 407 IAPGIALIGLTAAKSP-VMASAWLTLAIGMKSFSHS-GFLVNLQEIAP-QYSGVLHGISNTAGTF-AAILGTVGAGFFVE 482 (526)
Q Consensus 407 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~l-g~~~~~~~~g~l~~ 482 (526)
++..+++..+...++. ......+++..++...++. ..-....|+.| +..|++.|+...+.++ |...+....|++.|
T Consensus 329 ~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d 408 (448)
T COG2271 329 LLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408 (448)
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe
Confidence 4444444444433322 2222223333333333333 33455667778 5899999999999999 99999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhcCce
Q 009757 483 LVGSFQGFLLLTSLLYFLSALFYIIFSTGER 513 (526)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (526)
.+| |...|++..+.++++.++++...+.++
T Consensus 409 ~~g-W~g~Fi~~~~~a~l~~lll~~~~~~~~ 438 (448)
T COG2271 409 TWG-WDGGFIVLSIAALLAILLLLPVWNAEE 438 (448)
T ss_pred cCC-CcchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 987 888888888888887777766654433
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.4e-41 Score=312.03 Aligned_cols=380 Identities=21% Similarity=0.254 Sum_probs=316.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHH
Q 009757 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (526)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 175 (526)
..+..++.+.++.|............+|++.+|+|+|..+.|++.++|.++..++.++...+.||+.||++++..+.++.
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 34666777888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCch
Q 009757 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (526)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~ 255 (526)
++.++++++ +||+.++++|++.|+..|.+++...++..+..|+++|++++++...+.+++.++|.+++.++.+.+|||
T Consensus 90 ~~n~l~alA--p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR 167 (394)
T COG2814 90 VSNLLSALA--PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWR 167 (394)
T ss_pred HHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHH
Confidence 999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHH
Q 009757 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAM 335 (526)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (526)
..|+..++++++..+..+...| |++.+ +++.....+..+++|+|+++...+..++
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP--~~~~~-----------------------~~~~~~~~~~~~~l~~p~v~~~l~~t~l 222 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP--PSEIS-----------------------GSLPGPLRTLLRLLRRPGVLLGLLATFL 222 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--CccCC-----------------------CCCCcchhHHHHHhcCchHHHHHHHHHH
Confidence 9999999999998888888887 21111 1111222334588999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHh
Q 009757 336 HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (526)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (526)
...+.+..++|+.+++++..|++....++....++++..+|+.++|++.|| +.+ ...........+.++.
T Consensus 223 ~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~---------~~l~~~~~l~a~~~l~ 292 (394)
T COG2814 223 FMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR---------RALIAALLLLALALLA 292 (394)
T ss_pred HHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch---------hHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 554 1222222222232332
Q ss_pred hc-cCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHH
Q 009757 416 LT-AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLT 494 (526)
Q Consensus 416 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~ 494 (526)
+. ..++.+.......+.................+..|+.++.+.+++....++|..+|..++|.+.|+.| +....++.
T Consensus 293 l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~~ 371 (394)
T COG2814 293 LTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWVG 371 (394)
T ss_pred HHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHH
Confidence 32 33334444444433222222333334444555667999999999999999999999999999999977 88899998
Q ss_pred HHHHHHHHHHHHHHhcCce
Q 009757 495 SLLYFLSALFYIIFSTGER 513 (526)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~ 513 (526)
+.+.+++.++.+...+.++
T Consensus 372 a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 372 AALLLLALLLALLSARKDR 390 (394)
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 8888888877766544433
No 3
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=9.8e-40 Score=328.64 Aligned_cols=423 Identities=26% Similarity=0.491 Sum_probs=330.4
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhh----------------------hcCCccchhhHHHHHHHHHHHHh
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSL----------------------AHGWSRSFSGIVQSSFLWGYLVS 150 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~~~~s~~~~g~~~s~~~~~~~~~ 150 (526)
..+.|+.+..+++++..+++.++..++...+.+.+ +++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 45567888899999999999999999999988877 78999999999999999999999
Q ss_pred hhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHH
Q 009757 151 PIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIA 230 (526)
Q Consensus 151 ~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~ 230 (526)
+++.|+++||+|||+++.++.++.+++.+++.++...+++.+++.|+++|++.+...+....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999988875542256888999999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCC
Q 009757 231 MGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHK 309 (526)
Q Consensus 231 ~~~~~~G~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (526)
..+..+|.++++++++.+.+. .|||+.|++.+++.++..++++...+|+|+..+..+++|++...+... ++.+
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~------~~~~ 246 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQ------GQKG 246 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcc------cccC
Confidence 999999999999999999988 499999999999888877777777777776555444444433322111 1111
Q ss_pred CCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHh
Q 009757 310 PATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (526)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (526)
+.+...+++++++++.+|...+..++.....+.+..|+|.|+++.+|++..+.++..++..++..++.++.|++.||+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~ 326 (465)
T TIGR00894 247 STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKS 326 (465)
T ss_pred CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11223468899999999999999999999999999999999999899999999999999999999999999999999987
Q ss_pred hcCccch-hHHHHHHHHHHHHHHHHHhhcc-CchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHh
Q 009757 390 RGTSVTL-TRKILQSIGFIAPGIALIGLTA-AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGT 467 (526)
Q Consensus 390 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 467 (526)
|+..... .++.....+..+.++..+.... ....+..+..+.+..+..+...+.......+..|+..|.+.|+.+..+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 406 (465)
T TIGR00894 327 SKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGF 406 (465)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHH
Confidence 6543322 1222222222222222222222 2233333333444444333334445555667788899999999999999
Q ss_pred HHHHHHHHHHhhhcccc--chhHHHHHHHHHHHHHHHHHHHHHhcCceeccccccc
Q 009757 468 FAAILGTVGAGFFVELV--GSFQGFLLLTSLLYFLSALFYIIFSTGERVNFDEAGE 521 (526)
Q Consensus 468 lg~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (526)
+++.++|.+.|++.+.. +.|...|.+.+++.+++.++.....+.++++++++++
T Consensus 407 l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~~~~~ 462 (465)
T TIGR00894 407 IGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSAERQDWAKEEK 462 (465)
T ss_pred HHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecceecCCCCCcc
Confidence 99999999999998754 4588888888888888877776665665555554443
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.4e-40 Score=334.09 Aligned_cols=402 Identities=17% Similarity=0.116 Sum_probs=300.5
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHH
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
..+..+.++.++++.+++.+.++..+++..|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|||+++.++.+
T Consensus 23 ~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 23 WFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 34456778888899999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHhhhhh-----ccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHH
Q 009757 173 LWSLATFLTPW-----AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (526)
Q Consensus 173 ~~~~~~~~~~~-----~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~ 247 (526)
+.+++.++.++ + ++++.++++|+++|++.+...+...++++||+|+++|++++++...+.++|.++++++..+
T Consensus 103 ~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~ 180 (467)
T PRK09556 103 LSAICMLGFGASLGSGS--VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALW 180 (467)
T ss_pred HHHHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHH
Confidence 87777665544 5 7999999999999999999999999999999999999999999999999999999999877
Q ss_pred HHhhc---CchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCch-HHHHHcC
Q 009757 248 LMSQA---GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP-FRRLLSK 323 (526)
Q Consensus 248 l~~~~---gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 323 (526)
+.+.. +||..|.+.+++.++..++.+++.++.|++.+..++++.. .+..... ....+.++....+. .+..+++
T Consensus 181 ~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 257 (467)
T PRK09556 181 GANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIF--GEPISEE-DKETESTDMTKWQIFVEYVLKN 257 (467)
T ss_pred HHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcc--cCccchh-hhccccccCcHHHHHHHHHHcC
Confidence 76653 6999999888888777777777667766554332222210 0000000 00000000011111 2347899
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHH
Q 009757 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (526)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (526)
|.+|...+..++.+....+...|+|.|+++.+|++..++++..+...++..++.++.|+++||+++|+. ....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~-------~~~~ 330 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA-------LVAC 330 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch-------HHHH
Confidence 999999999888888888899999999998899999999999999999999999999999999998832 2211
Q ss_pred HHHHHHHHHHHhhccCchhHHH-HHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhH-HHHHHHHHHhhh
Q 009757 404 IGFIAPGIALIGLTAAKSPVMA-SAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTF-AAILGTVGAGFF 480 (526)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l-g~~~~~~~~g~l 480 (526)
.........++.+...++.+.. ...++++.+..+.. ........+..| +.+|++.|+.+...++ |.+++|.+.|++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i 409 (467)
T PRK09556 331 IALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQ-LLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMI 409 (467)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHH-HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHH
Confidence 1111112112222222333322 22222222221111 122234446666 6999999999999997 779999999999
Q ss_pred cc------------ccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 481 VE------------LVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 481 ~~------------~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
.| ..| |...|.+..++.+++.+..+.+
T Consensus 410 ~~~~~~g~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 410 ADPTKNGTPIFGYTLTG-WAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred hcccccccccccccccC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 99 455 8999988888888877666655
No 5
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.3e-39 Score=318.43 Aligned_cols=375 Identities=15% Similarity=0.124 Sum_probs=293.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHH
Q 009757 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (526)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 175 (526)
++|..+..+.+..+..........+.+|.+.+++|.|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34544555555444444444455667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCch
Q 009757 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (526)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~ 255 (526)
+++++++++ ++++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..++|++++.+.+..|||
T Consensus 86 ~~~~~~~~~--~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~ 163 (390)
T PRK03545 86 ASHVLSALA--WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWR 163 (390)
T ss_pred HHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHH
Confidence 999999999 999999999999999999989999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHH
Q 009757 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAM 335 (526)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (526)
+.|++.+++.++..+..+...|+.+++++ ...++.++.+|+|.++...+..++
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 216 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPSEHS---------------------------GSLKSLPLLFRRPALVSLYLLTVV 216 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCc---------------------------chHHHHHHHHhCcHHHHHHHHHHH
Confidence 99999998877766665555554332110 011245678899988877666666
Q ss_pred HHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHh
Q 009757 336 HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (526)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (526)
.....+....+.+.++++.+|++..+++.+.+...++.++++++.+++.||+++| .......+........
T Consensus 217 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~---------~~~~~~~~~~~~~~~l 287 (390)
T PRK03545 217 VVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG---------FLLIAIALLLVCLLLL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh---------HHHHHHHHHHHHHHHH
Confidence 6666666778888898887899999999999999999999999999999999876 2222212111111122
Q ss_pred hccCchhHHHHHHH-HHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHH
Q 009757 416 LTAAKSPVMASAWL-TLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLT 494 (526)
Q Consensus 416 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~ 494 (526)
....++.+...... +.+.+. ....+.......+..|+.+++++|+++...++|..+||.+.|.+.|+.| ++..+...
T Consensus 288 ~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~ 365 (390)
T PRK03545 288 LPAANSEWHLSVLSIFWGIAI-MCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVG 365 (390)
T ss_pred HHHhchHHHHHHHHHHHHHHH-hcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHH
Confidence 22233333333332 233332 2333444556667778899999999999999999999999999999998 88899888
Q ss_pred HHHHHHHHHHHHHHhc
Q 009757 495 SLLYFLSALFYIIFST 510 (526)
Q Consensus 495 ~~~~~~~~~~~~~~~~ 510 (526)
+.+.+++++......+
T Consensus 366 ~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 366 AALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHcc
Confidence 8888887777666544
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=2e-39 Score=319.96 Aligned_cols=394 Identities=18% Similarity=0.215 Sum_probs=297.2
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHH
Q 009757 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (526)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (526)
++.+|+.+..+++.++++++++...+...|.+.+|+|++..++|++.+++.+++.+++++.|++.||+|||+++..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 3 KKLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred eeehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 34578889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh---
Q 009757 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS--- 250 (526)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--- 250 (526)
.+++.++++++ ++++.+++.|+++|++.+...+....++.|++|+++|++++++++.+.++|..+++++++++.+
T Consensus 83 ~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 160 (412)
T TIGR02332 83 WGIASTATMFA--TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG 160 (412)
T ss_pred HHHHHHHHHHh--cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999998864
Q ss_pred ---hcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccc---cccCCCC--CCC-CCCchHHHHH
Q 009757 251 ---QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKP---LLMGNKH--KPA-TVIPPFRRLL 321 (526)
Q Consensus 251 ---~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~-~~~~~~~~~~ 321 (526)
..|||+.|++.++..++..++.+++.||+|++.+...+++++...+..+.. .+..++. ++. .....+++++
T Consensus 161 ~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T TIGR02332 161 LMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF 240 (412)
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc
Confidence 369999999998888777777777778887664443333332221111100 0000000 000 1112344444
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHH
Q 009757 322 SKMPTWSIIVANAMHSWGFFVILSWMPIYFNFV-YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKI 400 (526)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~ 400 (526)
+|.+|...+..++.....+.+.+|+|.++++. .|++..+++.+.....++..++.++.|+++||+++|+ ..
T Consensus 241 -~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~-------~~ 312 (412)
T TIGR02332 241 -TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK-------HH 312 (412)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH-------HH
Confidence 67888888888888888899999999999883 3678888899999999999999999999999998762 11
Q ss_pred HHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhh
Q 009757 401 LQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGF 479 (526)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~ 479 (526)
.. ...+...+.+...............+++.........+.......+..| ++|+++.|+.+...++|++++|.+.|.
T Consensus 313 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~ 391 (412)
T TIGR02332 313 TA-LPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGI 391 (412)
T ss_pred HH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccc
Confidence 11 1111222222211112222222212221111111112222333344444 799999999999999999999999999
Q ss_pred hccccchhHHHHHHHHHHH
Q 009757 480 FVELVGSFQGFLLLTSLLY 498 (526)
Q Consensus 480 l~~~~g~~~~~~~~~~~~~ 498 (526)
+.|..|+|...+.+++++.
T Consensus 392 i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 392 LKDATGSFNSGLWFVAALL 410 (412)
T ss_pred ccccCCCCchhHHHHHHHH
Confidence 9999888888887766544
No 7
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-39 Score=313.79 Aligned_cols=389 Identities=32% Similarity=0.625 Sum_probs=346.1
Q ss_pred hhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccc
Q 009757 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (526)
Q Consensus 126 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~ 205 (526)
..++++|..+.|++.+.+..|+.+++++.|+++||+|.|+++..+.++.++++++..++...+++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 34688999999999999999999999999999999999999999999999999999998667778889999999999999
Q ss_pred hhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 009757 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP 284 (526)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (526)
.+|+...+.++|.|++||++..++...+..+|.+++.+++|++.+. +||+.+|++.++++++..++++.+..|+|.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhh
Q 009757 285 QISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW 364 (526)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 364 (526)
...++|++++.+..... ..++....|++++++++.+|.+.+..++...+.+.+..|+|.|+++++|++..+.|+
T Consensus 225 ~is~~El~~I~~~k~~~------~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~ 298 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEA------HVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGF 298 (466)
T ss_pred CCCHHHHHHHHhccccc------ccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhH
Confidence 99999988887654322 111115679999999999999999999999999999999999999999999999999
Q ss_pred HhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCc--hhHHHHHHHHHHHHHHhhhhhh
Q 009757 365 FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK--SPVMASAWLTLAIGMKSFSHSG 442 (526)
Q Consensus 365 ~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 442 (526)
+.++..+...+..+++|.++||+.+|....+..|+..-.++..+.++.++.+...+ ..+..+.++.+..+..+...+.
T Consensus 299 ~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~G 378 (466)
T KOG2532|consen 299 LSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISG 378 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhh
Confidence 99999999999999999999999887666777788999999999999888887766 3445666666667777777777
Q ss_pred HHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhcc-c-cchhHHHHHHHHHHHHHHHHHHHHHhcCceecccccc
Q 009757 443 FLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVE-L-VGSFQGFLLLTSLLYFLSALFYIIFSTGERVNFDEAG 520 (526)
Q Consensus 443 ~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~-~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (526)
...-..+..|++.+..+|+.+.+..+.++++|.+.|.+.. . ...|+..|++.+++.+++.+++.++.+.+++++.+.+
T Consensus 379 f~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~~ 458 (466)
T KOG2532|consen 379 FYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTKSE 458 (466)
T ss_pred hHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCcccCccCCc
Confidence 7777777789999999999999999999999999999994 1 2369999999999999998888777667676666543
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=9.1e-39 Score=317.89 Aligned_cols=404 Identities=18% Similarity=0.168 Sum_probs=299.3
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (526)
+.++.......+.++..+++...++..+|.+.+++|.+..+.|++.+.+.+++.+++++.|++.||+|||+++.++.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 19 YWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 34556677777888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
+++.++++++ ++++.+++.|++.|++.|...+...+++.+++|+++|++++++.+.+.++|..+++.+++++.+.+||
T Consensus 99 ~~~~~~~~~~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw 176 (434)
T PRK11663 99 GIINILFGFS--SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGW 176 (434)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence 9999999998 99999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChh-HHHHHHHhcccccccCCCCCCCCCCchH-HHHHcCchHHHHHHH
Q 009757 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKY-ELEYILREKQKPLLMGNKHKPATVIPPF-RRLLSKMPTWSIIVA 332 (526)
Q Consensus 255 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 332 (526)
|+.|++.+++.++..++..+..+|+|++....... +.+...+..+ +.+.++.+..+.+ +..+++|.+|.+.+.
T Consensus 177 ~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (434)
T PRK11663 177 RYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQ-----QQEGAGLSRKEILTKYVLLNPYIWLLSFS 251 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccch-----hccccCCChhhhHHHHHhcChHHHHHHHH
Confidence 99999988877665555555556655432111100 0000000000 0000001111112 236778999988888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHH
Q 009757 333 NAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIA 412 (526)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (526)
.++.......+..|+|.|+++.+|++..+++...+...+++.+++++.|++.||+.+++... .......+.......
T Consensus 252 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~---~~~~~~~~~~~~~~~ 328 (434)
T PRK11663 252 YVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGP---MNLIFAAGILLSVGS 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccH---HHHHHHHHHHHHHHH
Confidence 88777788888899999998778999999999999999999999999999999994331100 011112222222222
Q ss_pred HHhhccCchhHHHHHHHHHHHHHHhhhh-hhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHH
Q 009757 413 LIGLTAAKSPVMASAWLTLAIGMKSFSH-SGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGF 490 (526)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~ 490 (526)
+..... .+..... ..++..++..... ........+..| +++|++.|+.++..++|.+++|.+.|++.|+.| +...
T Consensus 329 ~~~~~~-~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~~ 405 (434)
T PRK11663 329 LWLMPF-ASYVMQA-ACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTGF 405 (434)
T ss_pred HHHccc-ccHHHHH-HHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHHH
Confidence 222222 2222221 2222222222221 222344566665 799999999999999999999999999999988 8899
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q 009757 491 LLLTSLLYFLSALFYIIFSTG 511 (526)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~ 511 (526)
|...+++.+++++..+...+.
T Consensus 406 f~~~~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 406 FVVISIAAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 988888877776665554333
No 9
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=3.1e-37 Score=316.30 Aligned_cols=405 Identities=16% Similarity=0.146 Sum_probs=296.9
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHH
Q 009757 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (526)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (526)
.+.+|.++++++++.+..+++...++..+|.+.++++++..+.+++.+++.++.+++++++|+++||+|||++++++.++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45678888888888898899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc-
Q 009757 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA- 252 (526)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~- 252 (526)
.+++.++++++ ++++.++++|++.|++.|+..+...+++.|++|+++|++.++++..+..+|.++++.++..+...+
T Consensus 242 ~~i~~ll~afa--~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 242 NGFFAFFSSFV--QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999998 899999999999999999999999999999999999999999999999999999999887776533
Q ss_pred ------------CchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCC-ChhHHHHHHHhccccc-----------------
Q 009757 253 ------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQI-SKYELEYILREKQKPL----------------- 302 (526)
Q Consensus 253 ------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------------- 302 (526)
+||+.+++.++..++. ++..++.||+|+..... +.++.....++.....
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~ 398 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIK 398 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHH
Confidence 5888888877765554 44556678887642111 1111111111110000
Q ss_pred ---ccC---C-CCCCC---------------CCCchHHHHHcCc---hHHHHHHHHHHHHHHHHHHHHhHHHHHHHH---
Q 009757 303 ---LMG---N-KHKPA---------------TVIPPFRRLLSKM---PTWSIIVANAMHSWGFFVILSWMPIYFNFV--- 354 (526)
Q Consensus 303 ---~~~---~-~~~~~---------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 354 (526)
... + +.... ..+.+++.+++.+ +.+.+++.+++..++++++..|+|.++++.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 399 TIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred HhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00000 0011344555443 356677888888899999999999886541
Q ss_pred -h-------------------------------------cC-----C----------------c----------------
Q 009757 355 -Y-------------------------------------HI-----D----------------L---------------- 359 (526)
Q Consensus 355 -~-------------------------------------g~-----s----------------~---------------- 359 (526)
+ |+ + .
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence 0 00 0 0
Q ss_pred ------------------------------------chhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHH
Q 009757 360 ------------------------------------RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (526)
Q Consensus 360 ------------------------------------~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (526)
....+...+..++.+++.++.++++||+||| ..+.
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr---------~~l~ 629 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL---------RMLA 629 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHH
Confidence 0012334556688899999999999999998 3444
Q ss_pred HHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcc
Q 009757 404 IGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (526)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~ 482 (526)
+++++.+++.+++...++....++..++..++.....+....++.++.| +.|++++|+.++...+|.+++|.+.|.+.+
T Consensus 630 ~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 630 GSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555544444444333333334344444556667788889888 699999999999999999999999998887
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhcCc
Q 009757 483 LVGSFQGFLLLTSLLYFLSALFYIIFSTGE 512 (526)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (526)
. + ...+|++.+++.++++++.+++++++
T Consensus 710 ~-~-~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 710 I-T-KAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred h-h-hHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 5 2 56677777777777776666664433
No 10
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=2e-37 Score=306.34 Aligned_cols=394 Identities=26% Similarity=0.418 Sum_probs=306.1
Q ss_pred HHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhcccc
Q 009757 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADT 187 (526)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 187 (526)
+++.+++...++...|.+.+++|.++.+.|++.+++.++..++.++.|+++||+|||+++.++.++.+++.++++++ +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA--G 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH--c
Confidence 45667777888999999999999999999999999999999999999999999999999999999999999999998 8
Q ss_pred chHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 009757 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (526)
Q Consensus 188 ~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 267 (526)
+++.++++|++.|++.+...+....++.|++|+++|++++++.....++|.++++.+++.+.+..+||+.|++.+++.++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888877
Q ss_pred HHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhH
Q 009757 268 WVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWM 347 (526)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (526)
..+..++..++++++.+..++++++...+....+ .+.+++++......++.+++|+++...+..++.......+..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAE--QQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWF 238 (399)
T ss_pred HHHHhhheecCCCCccccCCHHHHhhcchhhccc--cccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 7776666666665544333333222111111100 01112223344567788999999999999999899999999999
Q ss_pred HHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHH
Q 009757 348 PIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASA 427 (526)
Q Consensus 348 ~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (526)
|.|+++.+|.+..+.+++.+...++..++.++.+++.||+++|+....... .......+...+........+..+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (399)
T TIGR00893 239 PTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFAR-KTAIIAGLVLSLLMFATNYVNIPYAALA 317 (399)
T ss_pred HHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH-HHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 999998889999999999999999999999999999999999842111110 1111111112222222222223333333
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHH
Q 009757 428 WLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYI 506 (526)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 506 (526)
...++.+..+ ..+....+..+..| ++|+++.|+.+.+.++|..++|.+.|.+.|..|++...+.+.+++.+++.+..+
T Consensus 318 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 318 LVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 3333333333 45566666777766 699999999999999999999999999999987788888888777777666554
Q ss_pred H
Q 009757 507 I 507 (526)
Q Consensus 507 ~ 507 (526)
.
T Consensus 397 ~ 397 (399)
T TIGR00893 397 L 397 (399)
T ss_pred H
Confidence 3
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=4.5e-37 Score=304.37 Aligned_cols=381 Identities=21% Similarity=0.187 Sum_probs=292.8
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (526)
+++|..+.++++..+..+++....++..|.+.+++|.++.+.|++.+.+.++..+++++.|+++||+|||+++.++.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 46788888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
.++.+++.+. ++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..+|
T Consensus 91 ~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 168 (406)
T PRK11551 91 GLFSLATAQA--WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW 168 (406)
T ss_pred HHHHHHHHHh--ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 9999888888 99999999999999999999999999999999999999999999999999999999999888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcC---chHHHHHH
Q 009757 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSK---MPTWSIIV 331 (526)
Q Consensus 255 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 331 (526)
|+.|++.+++.++..++..+..||+++..+...++ ++ .....+..+++ +..+...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~---~~~~~~~~~~~~~~~~~~~~~~ 227 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAG------------------KQ---RAPVLRALFGEGRATATLLLWI 227 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcc------------------hh---hhhhHHHHhhhhhhhHHHHHHH
Confidence 99999988776666665556666654321110000 00 00011122221 23333444
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHH
Q 009757 332 ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI 411 (526)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (526)
..++.....+....|.|.|+++ .|++..+.+.+.+...++..+++++.|++.||+++|+ ......+...+
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~---------~~~~~~~~~~~ 297 (406)
T PRK11551 228 SYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRR---------VVLLIYAGILA 297 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH---------HHHHHHHHHHH
Confidence 4455555666777889999988 7999999999999999999999999999999999882 22223333333
Q ss_pred HHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHH
Q 009757 412 ALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGF 490 (526)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~ 490 (526)
.++.+...++.+......++.........+.......+..| ++|+++.|+.+....++..++|.+.|.+.++.+++...
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~ 377 (406)
T PRK11551 298 SLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGV 377 (406)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHH
Confidence 33333333344333322222222222334455556666666 79999999999999999999999999999987767777
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009757 491 LLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~ 508 (526)
+.....+.+++.++.+..
T Consensus 378 ~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 378 IGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777766666666555544
No 12
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=7e-37 Score=306.91 Aligned_cols=391 Identities=17% Similarity=0.142 Sum_probs=286.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 176 (526)
+++.+...+...+........+.+..|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 34555566666677777777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh------
Q 009757 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS------ 250 (526)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~------ 250 (526)
+.++++++ ++++.++++|++.|++.+.. .....+++|++|+++|++++++.....++|..+++.+.+.+..
T Consensus 114 ~~~~~~~~--~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 114 AVFCMSLV--SSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred HHHHHHHh--cCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99989988 89999999999999998864 4456789999999999999999988888888877766655432
Q ss_pred ---hcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHH
Q 009757 251 ---QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW 327 (526)
Q Consensus 251 ---~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (526)
..|||+.|++.+++.++..++.+++.++.|+... ++.+ + +.+.++......+++.++++++|
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~----~~~~---~--------~~~~~~~~~~~~~~~~~~~~~~~ 255 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNY----RELK---K--------SGTMPKDSFSKVLRYGVTNYRTW 255 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCch----hhHH---h--------cCccccccHHHHHHHHHcCchhH
Confidence 2489999999999888777666666555443210 0000 0 00001111223456778899998
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 009757 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (526)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (526)
.+.+..++.......+..++|.|+.+.+|++..+++.+.++..++..++++++|+++||+++|.... .|+........
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~--~r~~~~~~~~~ 333 (476)
T PLN00028 256 ILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMR--GRLWALWIVQT 333 (476)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcc--hhHHHHHHHHH
Confidence 8888777766667778889999998878999999999999999999999999999999999873211 12233333333
Q ss_pred HHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchh
Q 009757 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSF 487 (526)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~ 487 (526)
+.++..+.+....+.+.....+++.........+....+..+..|+++|++.|+.+..+.+|+.++|.+.+ .+..++|
T Consensus 334 l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y 411 (476)
T PLN00028 334 LGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYST 411 (476)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH--hcCCccH
Confidence 33333333333333333332222222222233344455566777889999999998888888888877664 2223458
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 009757 488 QGFLLLTSLLYFLSALFYIIFS 509 (526)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~ 509 (526)
...|++.+++.+++.++.++.+
T Consensus 412 ~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 412 ETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHhee
Confidence 8899998888888877776654
No 13
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=4.9e-37 Score=307.15 Aligned_cols=414 Identities=18% Similarity=0.246 Sum_probs=290.8
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHH
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
.++++|.++...++.....+.++..++...|.+.++ |++..+.|++.+.+.+++.+++++.|+++||+|||++++++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~ 101 (452)
T PRK11273 23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLI 101 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHH
Confidence 344556666666677777777777788888999888 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcc--ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHH-HHHHHHHHHH
Q 009757 173 LWSLATFLTPWAA--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNA-IGLVLSPILM 249 (526)
Q Consensus 173 ~~~~~~~~~~~~~--~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-ig~~l~~~l~ 249 (526)
+.+++.+++++.. ..+++.+++.|++.|++.+...+.....+.+++|+++|+++++++..+.++|.. .+++++..+.
T Consensus 102 ~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 181 (452)
T PRK11273 102 LAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA 181 (452)
T ss_pred HHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 9999988887751 136888999999999999998888888999999999999999999999999864 4555544443
Q ss_pred hhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchH-HHHHcCchHHH
Q 009757 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF-RRLLSKMPTWS 328 (526)
Q Consensus 250 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 328 (526)
...+||+.|++.+++.++..++.+++.+|+|++....++++.+ .+..... .+++.++.+..+.+ +.++|++.+|.
T Consensus 182 ~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK---NDYPDDY-NEKHEQELTAKQIFMQYVLPNKLLWY 257 (452)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh---hcccccc-ccccCCCccHHHHHHHHHHcChHHHH
Confidence 4459999999998887777666666667766543222111110 0000000 00000111111111 34678899999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHH
Q 009757 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (526)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (526)
..+..++.+...+....|+|.|+++..|++..+++.......++..++.++.|+++||+++++... .......+..
T Consensus 258 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~----~~~~~~~l~~ 333 (452)
T PRK11273 258 IAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA----TGVFFMTLVT 333 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcch----HHHHHHHHHH
Confidence 888888888888888999999999988999899999888888999999999999999995431110 0111111111
Q ss_pred HHHHHHhhccCchhHHHHHHHHHHHHHHhhh-hhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHH-HHHHHhhhccccc
Q 009757 409 PGIALIGLTAAKSPVMASAWLTLAIGMKSFS-HSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAIL-GTVGAGFFVELVG 485 (526)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~-~~~~~g~l~~~~g 485 (526)
.+...+......+.+..... .+..+..... .........+..| +.+|+++|+.+...++|+.+ +|.+.|++.|+.|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g 412 (452)
T PRK11273 334 IATIVYWLNPAGNPTVDMAC-MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 412 (452)
T ss_pred HHHHHHHHhcccChHHHHHH-HHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc
Confidence 22222222222222222221 1222221111 1222334445555 79999999999999998765 7999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCceeccc
Q 009757 486 SFQGFLLLTSLLYFLSALFYIIFSTGERVNFD 517 (526)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (526)
|...|.+++++.+++++....+.+.++++.+
T Consensus 413 -~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (452)
T PRK11273 413 -WDGGFMVMIGGSILAVILLIVVMIGEKRHHE 443 (452)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHhccccchHH
Confidence 8889988888888777776666555444433
No 14
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=7.7e-37 Score=299.98 Aligned_cols=357 Identities=13% Similarity=0.171 Sum_probs=274.4
Q ss_pred hhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHH
Q 009757 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (526)
Q Consensus 116 ~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (526)
...++.+|.+.+|+|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+++++.++++++ ++++.+++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a--~~~~~ll~~ 103 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY--PQSALLLSS 103 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC--cchHHHHHH
Confidence 577899999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CchhHHHHHHHHHHHHHHHHHh
Q 009757 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGFLWVLVWLS 274 (526)
Q Consensus 196 r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~ 274 (526)
|+++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +||..+.+.++..++..+..+.
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 182 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWW 182 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 88999999999999999999999999988875 8999887766655444333333
Q ss_pred hccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 009757 275 ATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFV 354 (526)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (526)
..++.|++++ ++ +. ..++.+++++.|...+..++....+.....|+|.|+++
T Consensus 183 ~~~~~~~~~~---------------------~~--~~----~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~- 234 (393)
T PRK09705 183 QSAREVASSH---------------------KT--TT----TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE- 234 (393)
T ss_pred HhcCCCcccc---------------------CC--Cc----CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 2222221100 00 00 11245567788877777777778888899999999998
Q ss_pred hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc-cCchhHHHHHHHHHHH
Q 009757 355 YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT-AAKSPVMASAWLTLAI 433 (526)
Q Consensus 355 ~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 433 (526)
+|.+..+++...+...++.++++++.+++.||+++|+ ....+..+..+....+. ........ ...+.+.
T Consensus 235 ~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~l~g~ 304 (393)
T PRK09705 235 IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRK---------LLMLALVLQLVGFCGFIWLPLQLPVL-WAMVCGL 304 (393)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchH---------HHHHHHHHHHHHHHHHHHccchHHHH-HHHHHHH
Confidence 7999999999999999999999999999999999872 22222222222222221 12222211 1222333
Q ss_pred HHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHhcCc
Q 009757 434 GMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTGE 512 (526)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (526)
+.....+...........| +++++..|+.+.+.+++..++|.+.|++.|..|++...|.+.+++.++..++...+..++
T Consensus 305 g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 305 GLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred hccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3333333333333444444 689999999999999999999999999999999888888888887777766655554443
Q ss_pred e
Q 009757 513 R 513 (526)
Q Consensus 513 ~ 513 (526)
+
T Consensus 385 ~ 385 (393)
T PRK09705 385 F 385 (393)
T ss_pred c
Confidence 3
No 15
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=7.6e-36 Score=292.65 Aligned_cols=367 Identities=15% Similarity=0.139 Sum_probs=278.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 176 (526)
.|+.+..+.+..+..........+.+|.+.+++|.++++.|+..+++.++..+++++.|+++||+|||+++..+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 45555555555555555555666678999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchh
Q 009757 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (526)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~ 256 (526)
+.+++.++ ++++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..++|++++.+.+.+|||+
T Consensus 98 ~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 175 (394)
T PRK10213 98 SCLLVSFA--NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRN 175 (394)
T ss_pred HHHHHHHH--ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 99999998 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHH
Q 009757 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (526)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (526)
.|++.+++.++..+......||.+++++ ...+..++.+++|.++...+..++.
T Consensus 176 ~f~~~~~l~~~~~l~~~~~~p~~~~~~~---------------------------~~~~~~~~~l~~~~~~~~~~~~~~~ 228 (394)
T PRK10213 176 VFNAAAVMGVLCIFWIIKSLPSLPGEPS---------------------------HQKQNTFRLLQRPGVMAGMIAIFMS 228 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcccc---------------------------cchhHHHHHhcCHHHHHHHHHHHHH
Confidence 9999887776655444444444321110 0112345778899988877766666
Q ss_pred HHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhh
Q 009757 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (526)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (526)
.........++++++.+.+|++....+......+++..++.++.+++.||.+++ .......+.....++..
T Consensus 229 ~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~---------~l~~~~~~~~~~~~~l~ 299 (394)
T PRK10213 229 FAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL---------ALAGAPLVLAVSALVLT 299 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh---------HHHHHHHHHHHHHHHHH
Confidence 666666667764444445799999999999999999999999999999985433 22222222222222222
Q ss_pred ccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHH
Q 009757 417 TAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSL 496 (526)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~ 496 (526)
...++.+......++.+...+...+......++..|++++...++.....++|..+|+.+.|++.|..| +...+...++
T Consensus 300 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~ 378 (394)
T PRK10213 300 LWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGT 378 (394)
T ss_pred HHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHH
Confidence 222334433333333333344555555656666667777888888888999999999999999999987 6677766665
Q ss_pred HHHHHH
Q 009757 497 LYFLSA 502 (526)
Q Consensus 497 ~~~~~~ 502 (526)
+.++..
T Consensus 379 ~~~~~~ 384 (394)
T PRK10213 379 LMLLTA 384 (394)
T ss_pred HHHHHH
Confidence 544443
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.3e-36 Score=293.46 Aligned_cols=359 Identities=12% Similarity=0.071 Sum_probs=267.7
Q ss_pred HhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchH
Q 009757 111 CNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL 190 (526)
Q Consensus 111 ~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (526)
+......+++.+|.+.+|+|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+..... ++++
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~ 80 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDP--FNYE 80 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh--ccHH
Confidence 34556688899999999999999999999999999999999999999999999988766655555544433444 6899
Q ss_pred HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 009757 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (526)
Q Consensus 191 ~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~ 270 (526)
.++++|+++|++.+. .+.....++|++|+++|++++++...+..+|.++++++++++.+.+|||+.|++.+++.++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 999999999999986 5566677799999999999999999999999999999999999999999999999988888777
Q ss_pred HHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 009757 271 VWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIY 350 (526)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (526)
+.++..||+|+++++.. + ..+..+++++++++|.+|...+..++....++++.+|+|.|
T Consensus 160 ~~~~~lp~~p~~~~~~~--~-------------------~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~ 218 (368)
T TIGR00903 160 LVLAALPALPFQAAEGF--G-------------------FKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAA 218 (368)
T ss_pred HHHHHcCCCCCCCCCCc--c-------------------hHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888765432100 0 00011256789999999999999999999999999999999
Q ss_pred HHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHH
Q 009757 351 FNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLT 430 (526)
Q Consensus 351 ~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (526)
+++ .|++.. .+.......+.+.++ .+++.||..|++.+ +..........++.+..+....+.+..+....
T Consensus 219 L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r-----~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 288 (368)
T TIGR00903 219 LRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLR-----SIYIRAAALLIAAFFLALAFELNRLALFAFIG 288 (368)
T ss_pred HHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhH-----HHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 987 688764 555555555555444 57888888765211 11111112222222223232333333333333
Q ss_pred HHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHH
Q 009757 431 LAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYI 506 (526)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 506 (526)
+...+.....+....+..|..| +.||++.|+.+..+++++..+|.+.+.+.. | ....|.+.++..+++.+...
T Consensus 289 l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~-~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 289 IAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S-AEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHHHHH
Confidence 3333333444556677888888 699999999999999999999999988884 4 66677777777777666654
No 17
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-37 Score=281.88 Aligned_cols=387 Identities=18% Similarity=0.221 Sum_probs=325.8
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHH
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
.++.+++.+.+..+...+++..+.+++++.+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~ 87 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML 87 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH
Confidence 44556778888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcc-ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 009757 173 LWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (526)
Q Consensus 173 ~~~~~~~~~~~~~-~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~ 251 (526)
+..+-++..+++. .+++|++++++++.|++. ....+....+++|+||+++|.++|++. ..|+|..+...++..+...
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~ 165 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA 165 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhccc-ceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH
Confidence 9999999888873 245679999999999994 457888999999999999999999999 9999999999999999998
Q ss_pred cC---chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCC-chHHHHHcCchHH
Q 009757 252 AG---IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVI-PPFRRLLSKMPTW 327 (526)
Q Consensus 252 ~g---w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 327 (526)
.+ |+....+..+..++..+..++...|.|+.+... ++.. .+++.++++++.|
T Consensus 166 ~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~------------------------~~~~~~~~~~v~~~~~~W 221 (417)
T COG2223 166 FGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV------------------------KPQLPAQLKAVFSNKDTW 221 (417)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc------------------------cccchhHHHHHhcCcchH
Confidence 89 999999999988888888888887777642211 0111 5677899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 009757 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (526)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (526)
.+.+.++..+.++.++..++|.|+++++|.++.+++.+.....+.+.+.++++|+++||+|.+ |.........
T Consensus 222 ~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-------rv~~~~f~~~ 294 (417)
T COG2223 222 LLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-------RVTLAVFVGM 294 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch-------hHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988 2233332222
Q ss_pred HHHHHHHhhccC-----chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhcc
Q 009757 408 APGIALIGLTAA-----KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (526)
Q Consensus 408 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~ 482 (526)
..+...+.+... .+.+..+..++....+.+.+....+..+....|++.|.+.|+...++.+|++.-|...|...+
T Consensus 295 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~ 374 (417)
T COG2223 295 ALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLD 374 (417)
T ss_pred HHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHH
Confidence 222222222221 234444444555556667778888888899999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhcCc
Q 009757 483 LVGSFQGFLLLTSLLYFLSALFYIIFSTGE 512 (526)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (526)
.+|++...|++...+.+++.+.......++
T Consensus 375 ~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 375 LTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999988888887766654443
No 18
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=4.2e-36 Score=295.44 Aligned_cols=379 Identities=16% Similarity=0.162 Sum_probs=288.7
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHH
Q 009757 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (526)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 175 (526)
++++.....++.+++.......+++.+|.+.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45677778888888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh-hcCc
Q 009757 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAGI 254 (526)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~~gw 254 (526)
++.++++++ ++++.++++|+++|++.+...+...+++.|++|+++|+++++.......+|..++|.+.+.+.. ..+|
T Consensus 84 i~~~l~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 84 LAVAGLMFS--HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHc--chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 999999998 8999999999999999998889999999999999999999999999999999999999888764 5799
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHH
Q 009757 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (526)
Q Consensus 255 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (526)
|+.|++.+++.++..++.++. +.|+..++.++ +.+ ...+ . ..++.++...+..+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~~~----------------~~~---~~~~----~-~~~~~~~~~~~~~~ 215 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLFS--EFPALGKHAPK----------------ADK---PVAK----E-KWGIGVLFLAIAAL 215 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCccccccCcc----------------ccC---cccc----c-cCChHHHHHHHHHH
Confidence 999999888776655444332 22221110000 000 0000 0 12456667777777
Q ss_pred HHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHH
Q 009757 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (526)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (526)
+....++.+..|+|.|+++.+|++..+.+.+.+...++..+++++.+++.||+++|+ ... ....+..+.+.
T Consensus 216 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-------~l~--~~~~~~~~~~~ 286 (394)
T PRK03699 216 LYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR-------ILT--VLAGLALVLMY 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh-------HHH--HHHHHHHHHHH
Confidence 777778888999999998888999999999999999999999999999999999882 122 22222222222
Q ss_pred hhccCchhHHH-HHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHH
Q 009757 415 GLTAAKSPVMA-SAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLL 493 (526)
Q Consensus 415 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~ 493 (526)
.+...++.+.. ...+..+. ..+...+.......+..|+.+++..|......++|..++|.+.|++.|..| +...++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~ 364 (394)
T PRK03699 287 LFVNTDDPSHLLYAILGLGF-FSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLT 364 (394)
T ss_pred HHHHcCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhh
Confidence 33223333322 22222332 223334444555666667777888899999999999999999999999988 7778777
Q ss_pred HHHHHHHHHHHHHHHhcCce
Q 009757 494 TSLLYFLSALFYIIFSTGER 513 (526)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~ 513 (526)
.+++.+++.+++....+..|
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~ 384 (394)
T PRK03699 365 ANGLYAVVFVMCILLGFVSK 384 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 77777776665555544333
No 19
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=6.9e-36 Score=301.59 Aligned_cols=394 Identities=16% Similarity=0.113 Sum_probs=269.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccch-hhH-----HHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHH
Q 009757 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSF-SGI-----VQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (526)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~-~g~-----~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 171 (526)
++.+....++.+++++|...++...|.+.++++.+.+. .++ +.++..+++.++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 45667778899999999999999999999998644322 222 247788999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccccchHH--------HHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHH
Q 009757 172 ALWSLATFLTPWAADTSLLA--------LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLV 243 (526)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~ 243 (526)
+++++++++++++ ++++. ++++|+++|++.|+.++...+++.|++|+++|+++.++...+..+|..+|+.
T Consensus 95 ~l~~i~~~~~a~~--~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 95 VIMSISTFCIGLI--PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 88864 8899999999999999999999999999999999999999988899888887
Q ss_pred HHHHHH--------hhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCc
Q 009757 244 LSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIP 315 (526)
Q Consensus 244 l~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (526)
+...+. ..+|||+.|++.+++.++. ++.....||+|+.... ++...+.. ++...+....
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~~~-----~~~~~~~~-------~~~~~~~~~~ 239 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQQH-----VDKLEQGD-------REGLQDGPKV 239 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHHHH-----HHhhhhhc-------cccccccccC
Confidence 765543 2579999999977655543 3333445665432110 00000000 0000011223
Q ss_pred hHHHHHcC-chHHH-HHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCc
Q 009757 316 PFRRLLSK-MPTWS-IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (526)
Q Consensus 316 ~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (526)
++++++++ ++.+. .....++....++.+..|+|.|+++.+|++..+.++......++..++.++.|+++||+|||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-- 317 (490)
T PRK10642 240 SFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRP-- 317 (490)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH--
Confidence 45566653 23222 223334455677888899999998878998888888878888889999999999999999982
Q ss_pred cchhHHHHHHHH-HHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHH
Q 009757 394 VTLTRKILQSIG-FIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAI 471 (526)
Q Consensus 394 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~ 471 (526)
....... ..+....++.....++........++.....+...+....+..+..| +.|+++.|+.+....+++.
T Consensus 318 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~ 392 (490)
T PRK10642 318 -----FVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAG 392 (490)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHH
Confidence 1111111 11111211222222223332222222222222333444555566676 7999999987777778889
Q ss_pred HHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHhcCce
Q 009757 472 LGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTGER 513 (526)
Q Consensus 472 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (526)
++|.+.|++.+..+++...+++..+..+++++..+++++.++
T Consensus 393 ~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 393 LTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccC
Confidence 999999999887654455554555555555555555555443
No 20
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1e-35 Score=288.21 Aligned_cols=383 Identities=12% Similarity=0.105 Sum_probs=290.6
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhh-hcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHH
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 171 (526)
.++-.++.+.+..+..++++....++++..+.+.+ ++|+|.+|.+++.+++.+++.++.++.|++.||+|.|+++.++.
T Consensus 28 ~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ 107 (462)
T PRK15034 28 GKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFST 107 (462)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 34445678888888999999999999999999877 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcc---ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q 009757 172 ALWSLATFLTPWAA---DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 172 ~~~~~~~~~~~~~~---~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 248 (526)
++.++.+++.+++. .++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+
T Consensus 108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999888641 26899999999999998 668899999999999999999999999877888887776666553
Q ss_pred H-----h-------------hcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCC
Q 009757 249 M-----S-------------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKP 310 (526)
Q Consensus 249 ~-----~-------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (526)
. . ..+||.++++..++.++..++.++..++.++.
T Consensus 187 i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~---------------------------- 238 (462)
T PRK15034 187 IFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS---------------------------- 238 (462)
T ss_pred HHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc----------------------------
Confidence 3 2 22377777787777777776666665443321
Q ss_pred CCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhh
Q 009757 311 ATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (526)
+...++.++.+|+|+.|.+.+.+++.+..+.++..++|.|+++.+ +.........+..+...+.++++|+++||+|++
T Consensus 239 ~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~ 316 (462)
T PRK15034 239 RASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV 316 (462)
T ss_pred ccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch
Confidence 112245668999999999999999999999999999999998854 333333334445677888999999999999988
Q ss_pred cCccchhHHHHHHHH-HHHHHHH-HHhhccC--chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhccc-------------
Q 009757 391 GTSVTLTRKILQSIG-FIAPGIA-LIGLTAA--KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ------------- 453 (526)
Q Consensus 391 ~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 453 (526)
+ ....... ..+.... ...+... .+.+.....++......+......+-.+...+|+
T Consensus 317 ~-------vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~ 389 (462)
T PRK15034 317 R-------VTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSD 389 (462)
T ss_pred H-------HHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccch
Confidence 2 1222211 1111111 1222211 1233333333333344555666666555555542
Q ss_pred ---------chhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHhcCce
Q 009757 454 ---------YSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTGER 513 (526)
Q Consensus 454 ---------~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (526)
+.|.+.|+....+.+|+++.|.+.|...+..|++...|+...+..++++++.+....++.
T Consensus 390 ~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 390 EQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 678899999999999999999999999999999999999999988888887776644433
No 21
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=2.9e-36 Score=300.91 Aligned_cols=395 Identities=16% Similarity=0.135 Sum_probs=288.8
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (526)
.++|.++..+++.....+.....++..+|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 44677777777777766767677888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHH-HHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Q 009757 175 SLATFLTPWAADTSLLALLA-MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (526)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~-~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g 253 (526)
+++.++++++ ++++.+++ .|+++|++.+...+...+++.++++ ++|+++.++...+..+|..++|++++.+.+.+|
T Consensus 95 ~~~~~~~~~~--~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 95 SLGMILASFS--SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred HHHHHHHHHh--hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 9999999998 89988865 5799999999877777888999995 899999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCC---CCCCCCCchHHHHHcCchHHHHH
Q 009757 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNK---HKPATVIPPFRRLLSKMPTWSII 330 (526)
Q Consensus 254 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 330 (526)
||++|++.+++.++..+..++..++.+.......+++ +. .+.......... .++.....++ +++++|.++...
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 247 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSK-EG--LPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYL 247 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccc-cc--CCCCCccccccccchhhhhhhhcch-HHhcCchHHHHH
Confidence 9999999998877665555554443221110000000 00 000000000000 0000011112 578899999888
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHH--hhcCccchhHHHHHHHHHHH
Q 009757 331 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI--QRGTSVTLTRKILQSIGFIA 408 (526)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~--~~~~~~~~~~~~~~~~~~~~ 408 (526)
+..++...+......++|.|+++ .|++..+++.+.++.+++.++++++.+++.||.. ++ +......+.+.
T Consensus 248 ~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-------~~~~~~~~~~~ 319 (455)
T TIGR00892 248 SGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-------VQYLFSFALLF 319 (455)
T ss_pred HHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-------HHHHHHHHHHH
Confidence 88888778888888899999987 7999999999999999999999999999999732 22 12223333333
Q ss_pred HHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhc-ccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchh
Q 009757 409 PGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSF 487 (526)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~ 487 (526)
.++.++.....++.+..+...++.+...+...+.......+.. +++++++.|+++...++|.+++|.+.|.+.|..|+|
T Consensus 320 ~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~ 399 (455)
T TIGR00892 320 NGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNY 399 (455)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCc
Confidence 3333333333344444333333322233334444555555554 478999999999999999999999999999988778
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009757 488 QGFLLLTSLLYFLSALF 504 (526)
Q Consensus 488 ~~~~~~~~~~~~~~~~~ 504 (526)
...|++.+++.+++.+.
T Consensus 400 ~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 400 KYIFYASGSIVVSAGLF 416 (455)
T ss_pred chHHHHhhHHHHHHHHH
Confidence 88888887776666553
No 22
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.8e-35 Score=294.23 Aligned_cols=377 Identities=16% Similarity=0.115 Sum_probs=268.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcC---CccchhhHH---HHHHHHHHHHhhhhhhHHHhHhcChHHHHH
Q 009757 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHG---WSRSFSGIV---QSSFLWGYLVSPIAGGTLVDYYGGKIIMAW 169 (526)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~s~~~~g~~---~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 169 (526)
+++..+...+++.++++++...++...|.+.++++ .+..+.+.. .+...++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 45566777788899999999999999999999984 455544444 444455555999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccccchH--------HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHH
Q 009757 170 GVALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (526)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig 241 (526)
+.+++++++++++++ +++. .++++|+++|++.|..++...+++.|++|+++|+++.++...+...|.+++
T Consensus 99 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 99 SVCMMCFGSLVIACL--PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHhhc--CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999998 7653 588999999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHH--------hhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCC
Q 009757 242 LVLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATV 313 (526)
Q Consensus 242 ~~l~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (526)
+.+...+. ..+|||++|++.+++.++... .....||+++. +.+ +.+ .
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~-------~~~------------~~~-----~ 231 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ-------ETR------------ALK-----E 231 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH-------HHh------------hhc-----c
Confidence 87765543 257999999987776655432 22223333211 000 000 1
Q ss_pred CchHHHHHcCchHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcC
Q 009757 314 IPPFRRLLSKMPTWSIIVANAM-HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGT 392 (526)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~ 392 (526)
..++++++++++.+...+...+ ....++.+..|+|.|+++.+|++..+.+....+..++..++.++.|+++||++||+
T Consensus 232 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~- 310 (432)
T PRK10406 232 AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRT- 310 (432)
T ss_pred cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH-
Confidence 1256788888888776665544 36677788899999998878999888888888888888889999999999999882
Q ss_pred ccchhHHHHHHHHHHH--HHHHHHh-hccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhH
Q 009757 393 SVTLTRKILQSIGFIA--PGIALIG-LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTF 468 (526)
Q Consensus 393 ~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l 468 (526)
.. .....+. ....... .......+.......+..+..+...+....+..|..| +.|+++.|+.+..+++
T Consensus 311 ------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~ 383 (432)
T PRK10406 311 ------SM-LCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANA 383 (432)
T ss_pred ------HH-HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHH
Confidence 12 1111111 1111111 1112222322222222222333333455667778887 6899999999988775
Q ss_pred -HHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 469 -AAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 469 -g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
.+...|.+.+.+ +..|.+...+++.+++.+++.+..++.
T Consensus 384 ~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 384 LFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 345577777744 556656666666666666666655544
No 23
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=5.1e-35 Score=289.36 Aligned_cols=365 Identities=13% Similarity=0.078 Sum_probs=282.7
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHH
Q 009757 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (526)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (526)
+++.+.....+.+..+...+....+.+.+|.+.+++|.+..+.++..+.+.+++.+++++.|+++||+|||+++.++..+
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 45567777777888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Q 009757 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (526)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g 253 (526)
.+++.+++.++ ++++.+++.|+++|++.+...+...+++.|++|+++|.++.++......+|..+||.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 88 FILTCLAILLA--QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHH--ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999998888 8999999999999999998889999999999999999999999998889999999999999999899
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHH
Q 009757 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (526)
Q Consensus 254 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (526)
||+.|++.+++.++..+..++..||++++.++. .+..+..++++.++++|.++...+..
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVGEK---------------------LSLKELGRDYKLVLKNRRFVAGALAL 224 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc---------------------ccHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 999999988887776665555555543221100 00011223566889999998887777
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHH--
Q 009757 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI-- 411 (526)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-- 411 (526)
++..........+.|.++.+.+|+++.+.+.......++..++.++.+++.||+++|+ ....+.+...+
T Consensus 225 ~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~---------~~~~~~~~~~~g~ 295 (406)
T PRK15402 225 GLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRS---------LIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHH
Confidence 7766666677778899988888999999898888778888999999999999998872 22222222222
Q ss_pred HHHhhc---cCchhHHHHHHHH-HHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchh
Q 009757 412 ALIGLT---AAKSPVMASAWLT-LAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSF 487 (526)
Q Consensus 412 ~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~ 487 (526)
..+... .....++.....+ .+.+. +...+..........++++|++.++.+....++..+|+.+.+.+.+..+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~g~g~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 374 (406)
T PRK15402 296 LLAALATVISSHAYLWLTAGLSLYAFGI-GLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNG 374 (406)
T ss_pred HHHHHHHHcccccHHHHHHHHHHHHHHH-HHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Confidence 222111 1222333222222 33332 233333334444455689999999999999999999999999999988744
Q ss_pred HHHH
Q 009757 488 QGFL 491 (526)
Q Consensus 488 ~~~~ 491 (526)
...+
T Consensus 375 ~~~~ 378 (406)
T PRK15402 375 LFNL 378 (406)
T ss_pred HHHH
Confidence 4333
No 24
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1.6e-35 Score=290.09 Aligned_cols=372 Identities=17% Similarity=0.165 Sum_probs=280.4
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhh
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 180 (526)
+....+..+..........+.+|.+.+++|.+..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 44556666777777778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHH
Q 009757 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (526)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~ 260 (526)
++++ ++++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++++++++.+..+||+.|++
T Consensus 85 ~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 85 FTLS--SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHh--CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 9999 99999999999999999998888899999999999999999999999999999999999999998999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHH
Q 009757 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (526)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (526)
.+++.++..+..++..||.+++.+. +..+. .+.++++..|...+..++.....
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~~~~~--------------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 215 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRDEAKG--------------------------GLREQ-FHFLRSPAPWLIFAATMFGNAGV 215 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccc--------------------------CHHHH-HHHhcChHHHHHHHHHHHHHHHH
Confidence 9887776666555555654321100 00011 24567777777666555555555
Q ss_pred HHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhh-ccC
Q 009757 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL-TAA 419 (526)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 419 (526)
+....++++++++.+|+++.+.+++.+...++..+++++.+++.||+++++ ....+..+..+..+.+ ...
T Consensus 216 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~---------~~~~~~~~~~i~~~~~~~~~ 286 (382)
T PRK10091 216 FAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLR---------IAAVTDFIIVLALLMLFFFG 286 (382)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchh---------HHHHHHHHHHHHHHHHHHHH
Confidence 566677788888778999999999999999999999999999999998872 2222223323322222 112
Q ss_pred chhHHHHH-HHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHH
Q 009757 420 KSPVMASA-WLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLL 497 (526)
Q Consensus 420 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (526)
+..+.... ..+.+.+..+...+......++..+ +.++.+ ..+...++|.++||.+.|.+.|..++|...+...+++
T Consensus 287 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~ 364 (382)
T PRK10091 287 GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALL 364 (382)
T ss_pred hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHH
Confidence 22222222 2223333333333333334444443 344443 3467788999999999999999766699999888777
Q ss_pred HHHHHHHHHHHhcCc
Q 009757 498 YFLSALFYIIFSTGE 512 (526)
Q Consensus 498 ~~~~~~~~~~~~~~~ 512 (526)
.++.+.......++|
T Consensus 365 ~~~~~~~~~~~~~~~ 379 (382)
T PRK10091 365 SFAAMSSLLLYGRYK 379 (382)
T ss_pred HHHHHHHHHHHhhhh
Confidence 776666555554443
No 25
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.2e-35 Score=296.18 Aligned_cols=369 Identities=15% Similarity=0.154 Sum_probs=270.0
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (526)
+.+++.+..+.+.++.+.++.....+..|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45566678888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
+++.++++++ ++++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.++++.+.+.+.+..+|
T Consensus 94 ~~~~~~~~~~--~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 94 SVGTGLSGLA--SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHH
Q 009757 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (526)
Q Consensus 255 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (526)
|+.|++.++..++ .+......||+++. ++.+ . ....+ ..+........++++++++|.++.......
T Consensus 172 ~~~f~i~~~~~~~-~~~~~~~~p~~~~~------~~~~-~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (426)
T PRK12307 172 RAAFFVGLLPVLL-VIYIRARAPESKEW------EEAK-L-SGKGK----HSQSAWSVFSLSMKGLFNRAQFPLTLCVFI 238 (426)
T ss_pred HHHHHHHHHHHHH-HHHHHHHCCCChHH------HHhh-h-hcccc----ccccchhhhhHHHHHHHhhchHHHHHHHHH
Confidence 9999875443322 21111111222110 0000 0 00000 000111112235678888888765443322
Q ss_pred ---HHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHH
Q 009757 335 ---MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI 411 (526)
Q Consensus 335 ---~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (526)
......+.+..++|.|+++ .|+++...+.+.+...++..+++++.+++.||+++|+ ....+.+...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~---------~~~~~~~~~~~ 308 (426)
T PRK12307 239 VLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK---------TFSIGLLMSFL 308 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH---------HHHHHHHHHHH
Confidence 2223334467889999988 6999999999999999999999999999999999882 22222222222
Q ss_pred HHHhhc-cCchhHHHHHHHHHHHHHHh-hhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhH
Q 009757 412 ALIGLT-AAKSPVMASAWLTLAIGMKS-FSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (526)
Q Consensus 412 ~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~ 488 (526)
..+.+. ........+....++.+... ...+.......+..| +.+|++.|+.+....+++.++|.+.|++.+..| +.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~ 387 (426)
T PRK12307 309 FIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LG 387 (426)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HH
Confidence 222211 11122222222222222221 112334455566666 689999999999999999999999999999887 44
Q ss_pred H
Q 009757 489 G 489 (526)
Q Consensus 489 ~ 489 (526)
.
T Consensus 388 ~ 388 (426)
T PRK12307 388 A 388 (426)
T ss_pred H
Confidence 3
No 26
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=5.8e-36 Score=293.76 Aligned_cols=364 Identities=18% Similarity=0.188 Sum_probs=277.7
Q ss_pred HHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhc
Q 009757 105 ALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (526)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 184 (526)
++...+.......+++..|.+.+++|+++.+.|++.+++.++..+++++.|+++||+|||+++.++.++.+++.++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~ 88 (377)
T TIGR00890 9 TVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA 88 (377)
T ss_pred HHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH
Confidence 33333444446678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 009757 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (526)
Q Consensus 185 ~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~ 264 (526)
++++.++++|++.|++.+..++.....+.+++| ++|+++.++...+.++|..+++++.+.+.+..+||+.|++.+++
T Consensus 89 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 89 --DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred --HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 999999999999999999888888889999996 68999999999999999988877777777888999999999988
Q ss_pred HHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHH
Q 009757 265 GFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (526)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (526)
.++..+..++..++++++..+. +++......+.++.+++|.++...+..++.........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQLIKT--------------------NIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLI 225 (377)
T ss_pred HHHHHHHHHHheecCchhcccc--------------------CcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHH
Confidence 8877776666655543321100 00001112245678889998887777777666666666
Q ss_pred HhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCc--hh
Q 009757 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK--SP 422 (526)
Q Consensus 345 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 422 (526)
.+.+.|.++ +|.+..+.+.+.+...++..+++++.|++.||++||+ ....+.....+..+.....+ ..
T Consensus 226 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 295 (377)
T TIGR00890 226 GLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK---------TMSIVFGISAVGMAAMLFIPMLND 295 (377)
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---------hhhHHHHHHHHHHHHHHHcccchh
Confidence 777878766 7888888999999999999999999999999999882 22223333333332222222 22
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHH
Q 009757 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLS 501 (526)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (526)
.......++.....+...+.......+..| ++++++.|+.+....+|..++|.+.|.+.+..| +...|.+.+++.+++
T Consensus 296 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 296 VLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHh
Confidence 222222222222222333344455666665 789999999999999999999999999999887 888888877766655
Q ss_pred H
Q 009757 502 A 502 (526)
Q Consensus 502 ~ 502 (526)
.
T Consensus 375 ~ 375 (377)
T TIGR00890 375 L 375 (377)
T ss_pred c
Confidence 4
No 27
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=2e-35 Score=298.32 Aligned_cols=375 Identities=18% Similarity=0.149 Sum_probs=289.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHH
Q 009757 96 ERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (526)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 175 (526)
++|..+..+++..++...+....+.++|.+.+++|.+..+.+|+.+.+.++..++.+++|+++||+|||++++++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 35778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhc-CcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
+++++++++ +|++.++++|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++++.++.||
T Consensus 83 ~~~~~~~~a--~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 83 LASLAAAFS--PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 999999999 99999999999999999998888888887776 678999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCCCCCCCC-CChhHHHH----------HHHhccccccc-------------------
Q 009757 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELEY----------ILREKQKPLLM------------------- 304 (526)
Q Consensus 255 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~~~------------------- 304 (526)
|+.|++...+.++..++..+..|+++++..+ .+..+... ...........
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999998888777776666666765443221 11111000 00000000000
Q ss_pred CCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHH
Q 009757 305 GNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLS 384 (526)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~ 384 (526)
..+...+.+..+ .+++|+|.++...+..++.....++...++|.|+++.+|+++.++++......++..++.++.|++.
T Consensus 241 ~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~ 319 (495)
T PRK14995 241 RTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILV 319 (495)
T ss_pred HHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111222223 3688999988888888888888888889999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccchhHHHHHHHHHHHHHHHHHhh---ccCchhHHHHH-HHHHHHHHHhhhhhhHHHHHHhhcccchhhHHH
Q 009757 385 DMLIQRGTSVTLTRKILQSIGFIAPGIALIGL---TAAKSPVMASA-WLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHG 460 (526)
Q Consensus 385 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 460 (526)
||+++| .....+.++..+....+ ...++.+.... .++.+.+.+....+.........++++++.+.+
T Consensus 320 ~r~g~~---------~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~ 390 (495)
T PRK14995 320 SRLGLR---------LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGA 390 (495)
T ss_pred HHcCch---------HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHH
Confidence 999987 22233333333222221 22233333332 333344444333334444455555689999999
Q ss_pred HHHHHHhHHHHHHHHHHhhhcc
Q 009757 461 ISNTAGTFAAILGTVGAGFFVE 482 (526)
Q Consensus 461 ~~~~~~~lg~~~~~~~~g~l~~ 482 (526)
+.++..++|+.+|+.+.|.+.+
T Consensus 391 ~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 391 IETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998865
No 28
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.5e-35 Score=292.18 Aligned_cols=388 Identities=14% Similarity=0.128 Sum_probs=276.8
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHH
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
.++++|+.+..+++.++.+.++....++..|.+.+++|.++.+.|++.+++.++..+++++.|+++||+|||+++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 34567888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc
Q 009757 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (526)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~ 252 (526)
+.+++.+++++. ++++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+..
T Consensus 86 ~~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 86 LFSAGTLACGFA--PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHHHh--ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999998 999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C--chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChh-HHHHHHHhcccccccCCCCCCCCCCchHHHHHcC-ch-HH
Q 009757 253 G--IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKY-ELEYILREKQKPLLMGNKHKPATVIPPFRRLLSK-MP-TW 327 (526)
Q Consensus 253 g--w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 327 (526)
+ ||+.|++.++..++..+ .....||+++..+..+++ +.....++..+... ..+...+......++..++ +. +.
T Consensus 164 ~~~w~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (405)
T TIGR00891 164 GDGWRALFFISILPIIFALW-LRKNIPEAEDWKEKHAGKALVRTMVDILYGGEH-RIANIVMTLAAAMVQSAGKRWPTFV 241 (405)
T ss_pred CccHHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHhhhhhhhhhHHHHHhccch-hhhhhhhhhhHHhhhhhhhhhHHHH
Confidence 6 99999886655544333 333445543211110000 00000000000000 0000000000111111111 11 22
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 009757 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (526)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (526)
.......+..........++|.|+.+.+|++..+.+.+.+...++..+++++.+++.||+++|+. ...+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~---------~~~~~~ 312 (405)
T TIGR00891 242 YLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKA---------YVCSLL 312 (405)
T ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhh---------hHHHHH
Confidence 23333334444555667889999988889999999999999999999999999999999998831 122222
Q ss_pred HH-HHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc
Q 009757 408 AP-GIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 408 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g 485 (526)
.. ......+....+.+......++.........+.......+..| ++|+++.|+.+.+.+++..++|.+.|++.|..|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 313 AGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22 1111122222333333333222222222333444555666666 799999999999999999999999999999988
Q ss_pred hhHHHHHH
Q 009757 486 SFQGFLLL 493 (526)
Q Consensus 486 ~~~~~~~~ 493 (526)
+|...+..
T Consensus 393 ~~~~~~~~ 400 (405)
T TIGR00891 393 EYGTALAS 400 (405)
T ss_pred ccchhHHh
Confidence 77665544
No 29
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1e-33 Score=281.64 Aligned_cols=385 Identities=14% Similarity=0.070 Sum_probs=269.5
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhcchhh-hhhhc--CCccchhhHHH-----HHHHHHHHHhhhhhhHHHhHhcChH
Q 009757 94 TSERVKVVSMLALALALCNADRVVMSVAIVP-LSLAH--GWSRSFSGIVQ-----SSFLWGYLVSPIAGGTLVDYYGGKI 165 (526)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~--~~s~~~~g~~~-----s~~~~~~~~~~~~~G~l~dr~Grr~ 165 (526)
..++++.+....++.++++++...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~ 95 (438)
T PRK09952 17 LSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKR 95 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHH
Confidence 3445667788888999999999999888775 45555 66665 46554 3455677899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhccccchH--------HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhH
Q 009757 166 IMAWGVALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSG 237 (526)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G 237 (526)
++.++.+++++++++++++ ++++ .++++|+++|++.|..++....++.|++|+++|++..+....+..+|
T Consensus 96 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G 173 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLL--PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVG 173 (438)
T ss_pred HHHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999 8876 58889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh--------hcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCC
Q 009757 238 NAIGLVLSPILMS--------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHK 309 (526)
Q Consensus 238 ~~ig~~l~~~l~~--------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (526)
.+++..+...+.. .+|||.+|++.+++.++.. ......||+|+.. +.+ .+ .++
T Consensus 174 ~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~-~l~~~~~es~~~~------~~~---~~-------~~~-- 234 (438)
T PRK09952 174 LLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL-WVRNGMEESAEFE------QQQ---HE-------QAA-- 234 (438)
T ss_pred HHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH-HHHHhCCCChhHH------HHH---hh-------ccc--
Confidence 9999887776653 4799999998877654422 2222233332210 000 00 000
Q ss_pred CCCCCchHHHHHcCchHHHHHH-HHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHH
Q 009757 310 PATVIPPFRRLLSKMPTWSIIV-ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (526)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (526)
.+......+.++++|+.+...+ ..++.....+....|.|.|+++.+|++...........++...++.++.|+++||++
T Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~g 314 (438)
T PRK09952 235 AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFG 314 (438)
T ss_pred ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0011122334667777666544 445556677778899999998888988776555555667777888999999999999
Q ss_pred hhcCccchhHHHHHHHHHHHHHHHH--H-h-hccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHH
Q 009757 389 QRGTSVTLTRKILQSIGFIAPGIAL--I-G-LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISN 463 (526)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~ 463 (526)
||+ ... .+.+...+.. + . ....+..+..+...++.....+...+....+..|..| +.|+++.|+.+
T Consensus 315 rr~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~ 385 (438)
T PRK09952 315 RRR-------VYI--TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGY 385 (438)
T ss_pred chH-------HHH--HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHH
Confidence 882 122 2222111111 1 1 1112223332323333333334445556777788877 68899999976
Q ss_pred HHHh-HHHHHHHHHHhhhcccc-chhHHHHHHHHHHHHHHHHHHHHHh
Q 009757 464 TAGT-FAAILGTVGAGFFVELV-GSFQGFLLLTSLLYFLSALFYIIFS 509 (526)
Q Consensus 464 ~~~~-lg~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (526)
.... +++.++|.+.+++.+.. |+|...+.+.+++.+++.+..+..+
T Consensus 386 ~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 386 QVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcc
Confidence 6654 89999999999999865 3477777777777777777666553
No 30
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=6.4e-34 Score=287.22 Aligned_cols=373 Identities=13% Similarity=0.090 Sum_probs=278.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh
Q 009757 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (526)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 179 (526)
.+.+++++.++..++...+.+.+|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 45566777888888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHH
Q 009757 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (526)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~ 259 (526)
++.++ ++++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.++.|||+.|+
T Consensus 91 ~~~~~--~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALS--GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHHh--CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 88888 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHH----------HHhccc-ccc------------------cCCCCCC
Q 009757 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYI----------LREKQK-PLL------------------MGNKHKP 310 (526)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~------------------~~~~~~~ 310 (526)
+......+..+......|+.+.+..+.+....... ...... ... ..+++..
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN 248 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98877766666666555554433322221111000 000000 000 0001111
Q ss_pred CCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhh
Q 009757 311 ATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (526)
.++..+. +++|||.++...+..++..........+.|.|++..+|.++.+.++......++..++.++.+++.||+++|
T Consensus 249 ~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~ 327 (471)
T PRK10504 249 NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR 327 (471)
T ss_pred CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 1222233 578999998888888888888777778899999987899999999999888888888889999999999988
Q ss_pred cCccchhHHHHHHHHHHHHHHHHHh--hcc-CchhHHHHH-HHHHHHHHHhhhhhhHHHHHHhh-cccchhhHHHHHHHH
Q 009757 391 GTSVTLTRKILQSIGFIAPGIALIG--LTA-AKSPVMASA-WLTLAIGMKSFSHSGFLVNLQEI-APQYSGVLHGISNTA 465 (526)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~ 465 (526)
+ ....+..+..+.... ... .+..+.... ..+.+.+. +...+.......+. +++.++.++|+.++.
T Consensus 328 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 397 (471)
T PRK10504 328 R---------VLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVN-STRFSSMNTLTLKDLPDNLASSGNSLLSMI 397 (471)
T ss_pred H---------HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCHHhccchHHHHHHH
Confidence 2 222222322222222 211 122222222 22222222 23333444444444 457999999999999
Q ss_pred HhHHHHHHHHHHhhhccccc
Q 009757 466 GTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 466 ~~lg~~~~~~~~g~l~~~~g 485 (526)
..+|..+|+.+.|.+.+..|
T Consensus 398 ~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 398 MQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999988776
No 31
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=5.6e-34 Score=281.48 Aligned_cols=371 Identities=20% Similarity=0.183 Sum_probs=264.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcchhh-hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHH
Q 009757 98 VKVVSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (526)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 176 (526)
++.+..+.+..++..++..+..+.+|. +.+++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++.++.++.++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCAL 93 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHH
Confidence 344555667777777778888888887 5688999999999999999999999999999999999999999999998888
Q ss_pred HHhhhhhcc------ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 009757 177 ATFLTPWAA------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (526)
Q Consensus 177 ~~~~~~~~~------~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~ 250 (526)
+.+++.++. ..+++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|.++|+.+++.+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 766654431 02567899999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHH
Q 009757 251 QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII 330 (526)
Q Consensus 251 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (526)
..||+..+++.++..++..+.. . +.|+..+. + + ...++++.++ +++...
T Consensus 174 ~~g~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~-~-~-----------------------~~~~~~~~~~--~~~~~~ 222 (399)
T PRK05122 174 WGGLAGLGLLIMLLALLGLLLA-R---PRPAVPPV-K-G-----------------------ERLPFRRVLG--RVWPYG 222 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHH-h---cCCCCCCC-C-c-----------------------cchhHHHHHH--HHHHHH
Confidence 9999998887666544333222 1 11111110 0 0 0012223333 222222
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHH
Q 009757 331 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPG 410 (526)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 410 (526)
....+....+.....+++.|+.+ .|. .+.+.......++..+++++.+++.||+++|+ ....+..+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~---------~~~~~~~~~~ 290 (399)
T PRK05122 223 MGLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLR---------VAIVSLLVEI 290 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHH---------HHHHHHHHHH
Confidence 33334445566677888888876 465 34566677778888999999999999998772 2223333333
Q ss_pred HHHHhhccCchhHHHHHHH-HHHHHHHhhhhhhHHHHH-HhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhH
Q 009757 411 IALIGLTAAKSPVMASAWL-TLAIGMKSFSHSGFLVNL-QEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (526)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~ 488 (526)
+....+...++.+...... +.+.+.. ...+...... ...+++++|++.|+++...++|..+++.+.|.+.+..| ++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~ 368 (399)
T PRK05122 291 LGLLLLWLAPSPWMALIGAALTGFGFS-LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YP 368 (399)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HH
Confidence 3333333333443333332 2333333 3333333333 34445799999999999999999999999999999887 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCce
Q 009757 489 GFLLLTSLLYFLSALFYIIFSTGER 513 (526)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (526)
..+.+.+++.+++.++....+++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 369 SIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccc
Confidence 8988888888877776666544433
No 32
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=9e-34 Score=279.48 Aligned_cols=375 Identities=14% Similarity=0.107 Sum_probs=271.1
Q ss_pred HHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhh
Q 009757 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (526)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 183 (526)
..++.++...........++.+.+++|.++.+.|++.+.+.++..+++++.|++.||+|||+++..+.++.+++.+++..
T Consensus 18 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~ 97 (402)
T TIGR00897 18 GYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIV 97 (402)
T ss_pred HHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444334444566777899999999999999999999999999999999999999999999999988765432
Q ss_pred -cc-ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHH-HHHHHHHHHHHhhcCchhHHHH
Q 009757 184 -AA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGN-AIGLVLSPILMSQAGIFGPFVI 260 (526)
Q Consensus 184 -~~-~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~ig~~l~~~l~~~~gw~~~f~~ 260 (526)
.. .++++.+++.|++.|++.+...+...+.+.+++|+++|++++|+...+.++|. .+++++++.+.+..||+..++.
T Consensus 98 ~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~ 177 (402)
T TIGR00897 98 FGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWS 177 (402)
T ss_pred HhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 11 15788899999999999988888888889999999999999999999999997 6899999999888897766665
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHH
Q 009757 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (526)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (526)
.....++..++.++..++.+++.+.. + +++..+..+.++.++++|.++...+..++.....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (402)
T TIGR00897 178 ALAFVLTGGVIALFSNKDIFTPQHMQ-T------------------REKFSELGKAATILFTNPNVLLGGMVRIINTIGL 238 (402)
T ss_pred HHHHHHHHHHHHHhccCCCCCccccc-C------------------CcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 54443333334444444432211100 0 0001111234667899999998888888888888
Q ss_pred HHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHH--HHHHHHHHHHHHhhc-
Q 009757 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQ--SIGFIAPGIALIGLT- 417 (526)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~- 417 (526)
+.+..+.|.|+++ +|++..+.+.+.....++..++.++.|++.||+++|+. ... .....+..+.+....
T Consensus 239 ~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~-------~~~~~~l~~~~~~~~l~~~~~ 310 (402)
T TIGR00897 239 FGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT-------VRWFGGVGCGIFTLALYYIPQ 310 (402)
T ss_pred HHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999977 89999999998888999999999999999999998731 111 111111111111111
Q ss_pred -cCchhHHH-HHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHH
Q 009757 418 -AAKSPVMA-SAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTS 495 (526)
Q Consensus 418 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~ 495 (526)
..++.+.. ...++.+.+.... .+ ......+..|++||++.|+.+...++++.++|.+.|.+.|..| +...+++.+
T Consensus 311 ~~~~~~~~~~~~~~~~G~~~~~~-~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a 387 (402)
T TIGR00897 311 HFGHSFAVALIIAIALGIFLAGY-VP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIFA 387 (402)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHH-HH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHH
Confidence 12233332 2233333333322 23 3345567788899999999999999999999999999999988 777888877
Q ss_pred HHHHHHHHHHHHH
Q 009757 496 LLYFLSALFYIIF 508 (526)
Q Consensus 496 ~~~~~~~~~~~~~ 508 (526)
++.+++.++..+.
T Consensus 388 ~~~~i~~~~~~~~ 400 (402)
T TIGR00897 388 ALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHh
Confidence 7777766665554
No 33
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=2.1e-34 Score=287.19 Aligned_cols=402 Identities=18% Similarity=0.250 Sum_probs=285.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 176 (526)
++..+....+.+...+.++..+....|.+.+ +|+++.+.+++.+++.++..++.++.|+++||+|||+.+.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4666677777778888877777878888776 599999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcc--ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh-hcC
Q 009757 177 ATFLTPWAA--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAG 253 (526)
Q Consensus 177 ~~~~~~~~~--~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~~g 253 (526)
+.+++++.. .++++.+.+.|++.|++.+..++.....+.|++|+++|++++++.+.+.++|..+++.+.+...+ ..+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 888776541 14677888999999999999899899999999999999999999999999999999888776544 578
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCch-HHHHHcCchHHHHHHH
Q 009757 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPP-FRRLLSKMPTWSIIVA 332 (526)
Q Consensus 254 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 332 (526)
||..|++.+++.++..+..++..||+|++.+..+.++.+ .+..... .++.+.+....+. .+.+++++.+|...+.
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYR---NDYPDDY-NEKAEQELTAKEIFMQYVLPNKLLWYIAIA 259 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcc---ccccccc-ccccccccchHHHHHHHHccCchHHHHHHH
Confidence 999999999888877666666667665432111111000 0000000 0000000011111 2346789999988888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHH--HH
Q 009757 333 NAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA--PG 410 (526)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~--~~ 410 (526)
.++.+...+++..++|.|+++..|+++.++++...+..+.+++++++.|++.||+++++.. ......... ..
T Consensus 260 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~------~~~~~~~~~~~~~ 333 (438)
T TIGR00712 260 NVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG------ATGVFFMTLVTIA 333 (438)
T ss_pred HHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc------HHHHHHHHHHHHH
Confidence 7777778888889999999998899999999999999999999999999999999654211 111111111 11
Q ss_pred HHHHhhccCchhHHHHHHHHHHHHHHhhhhh-hHHHHHHhhcc-cchhhHHHHHHHHHhHHH-HHHHHHHhhhccccchh
Q 009757 411 IALIGLTAAKSPVMASAWLTLAIGMKSFSHS-GFLVNLQEIAP-QYSGVLHGISNTAGTFAA-ILGTVGAGFFVELVGSF 487 (526)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~-~~~~~~~g~l~~~~g~~ 487 (526)
+..+......+.+..... .+..+....... .......+..| +.+|++.|+.+...++++ +++|.+.|.+.|+.| +
T Consensus 334 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~ 411 (438)
T TIGR00712 334 VIVYWMNPAGNPLVDMIC-MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-W 411 (438)
T ss_pred HHHHHhcCCCchHHHHHH-HHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-c
Confidence 111111112222322211 122222211111 11233445555 799999999999988875 689999999999987 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Q 009757 488 QGFLLLTSLLYFLSALFYIIFSTG 511 (526)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~ 511 (526)
...+.+..++.+++.+..+++.+.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 412 DGGFMVMIGGSILAVILLIVVMIG 435 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888888777777776666655443
No 34
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=9.3e-35 Score=288.43 Aligned_cols=384 Identities=16% Similarity=0.116 Sum_probs=277.4
Q ss_pred HHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhh---
Q 009757 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW--- 183 (526)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~--- 183 (526)
..++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++.++.++.+++.+..+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 34455556667788889999999999999999999999999999999999999999999999988887777655432
Q ss_pred ccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHH
Q 009757 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (526)
Q Consensus 184 ~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~ 263 (526)
...++++.+++.|+++|++.+...++..+++.|++|+++|+++.++.....++|..+||.+++.+.+..+|++.|++.++
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 11267899999999999999888899999999999999999999999999999999999999999998899999998877
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHH
Q 009757 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (526)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (526)
..++..+..+ ..|+.+++++. +++..++..+.++..+++|.++...+..++.. ....+
T Consensus 185 ~~~~~~~~~~-~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 242 (417)
T PRK10489 185 GTFITLLPLL-RLPALPPPPQP--------------------REHPLRSLLAGFRFLLASPVVGGIALLGGLLT-MASAV 242 (417)
T ss_pred HHHHHHHHHH-hCCCCCCCCcc--------------------cccchHHHHHHHHHHHcChHHHHHHHHHHHHH-HHHhH
Confidence 7665554443 33443221110 00001111234556778888766655544433 34567
Q ss_pred HHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhH
Q 009757 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (526)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (526)
..++|.|+++.+|.+....+++.+...++..++.++.+++.||.+++ ..+..+.++..+.+..+...++.+
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~ 313 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG---------LLMLLSTLGSFLAVGLFGLMPMWI 313 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc---------hHHHHHHHHHHHHHHHHHccchHH
Confidence 78899999998899999999999999999999999999999875443 122233333334444444444444
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHH-HHHHHH
Q 009757 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTS-LLYFLS 501 (526)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~-~~~~~~ 501 (526)
......++.+...+...+....+.++..| +.||+++|+++...++|..++|.+.|.+.|..| +...+...+ +..+++
T Consensus 314 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~ 392 (417)
T PRK10489 314 LAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIG 392 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHH
Confidence 33333333223333344455566677766 689999999999999999999999999999988 444554444 444455
Q ss_pred HHHHHHHhcCceecccccccc
Q 009757 502 ALFYIIFSTGERVNFDEAGEF 522 (526)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~ 522 (526)
++.....++.++++.+|.+++
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 393 VLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHHhcccccccccccccCC
Confidence 555555555555554444433
No 35
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=3e-35 Score=288.89 Aligned_cols=372 Identities=19% Similarity=0.216 Sum_probs=278.7
Q ss_pred HHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhcc
Q 009757 106 LALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA 185 (526)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 185 (526)
+.++..+.+...++...|.+.+++|.+..+.|++.+++.++..++.++.|+++||+|||+++.++.++.+++.++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~- 80 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS- 80 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-
Confidence 3466777888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHH-HHHHHHHhhcCchhHHHHHHHH
Q 009757 186 DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL-VLSPILMSQAGIFGPFVIFGLS 264 (526)
Q Consensus 186 ~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~-~l~~~l~~~~gw~~~f~~~~~~ 264 (526)
++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++ .++..+.+..+||+.|++.+++
T Consensus 81 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (379)
T TIGR00881 81 -TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGII 159 (379)
T ss_pred -hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999 5777777788999999998888
Q ss_pred HHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHH
Q 009757 265 GFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (526)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (526)
.++..++.++..++++++.+..+.++.+. ++.+.. ..+++++........++++++|.++...+..++.......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (379)
T TIGR00881 160 AIIVSLICFLLLRDSPQSCGLPPAEEMPN--EEPDGD-AEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGIL 236 (379)
T ss_pred HHHHHHHHheeeCCCccccccCccccCcc--cccccc-cccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 77766666666666554322111111000 000000 000111112223345678899999998888888888888899
Q ss_pred HhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhcc--Cchh
Q 009757 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA--AKSP 422 (526)
Q Consensus 345 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 422 (526)
.+.|.|+++.+|++..+.+...+...++..++.++.+++.||..+++. ..............+..... ..+.
T Consensus 237 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (379)
T TIGR00881 237 DWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRR------GPLAVFFMALIIVSLLVYWLNPAANP 310 (379)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc------hHHHHHHHHHHHHHHHHHhcCcchhH
Confidence 999999998889999999999999999999999999999998754421 11111111222222222111 2222
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHH
Q 009757 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQG 489 (526)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~ 489 (526)
+......+..................+..| ++|+++.|+.+....+|+.++|.+.|.+.|..| |..
T Consensus 311 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~ 377 (379)
T TIGR00881 311 LMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WAG 377 (379)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-ccc
Confidence 222222222111122222333445556665 799999999999999999999999999999877 554
No 36
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.3e-33 Score=277.79 Aligned_cols=353 Identities=16% Similarity=0.173 Sum_probs=270.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh
Q 009757 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (526)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 179 (526)
.+..+....+........+.+.+|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 85 (385)
T TIGR00710 6 FALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSL 85 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHH
Confidence 34444444566667778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHH
Q 009757 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (526)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~ 259 (526)
++.+. ++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+||+.|+
T Consensus 86 ~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 163 (385)
T TIGR00710 86 GLALS--NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFA 163 (385)
T ss_pred HHHHH--ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 99998 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHH
Q 009757 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (526)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (526)
+.++..++..+..++..||++++.++.+ .+...+.+++.+++|+++...+...+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR00710 164 FLSLAGILLSALIFFILPETLPYEARIQ----------------------ISTYFETFLLLLKSKMFWGYALIYGASFGG 221 (385)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcccCC----------------------HHHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 9888877766666665555433221100 011123456788899998887777777777
Q ss_pred HHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc-c
Q 009757 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT-A 418 (526)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 418 (526)
......+.|.++++.+|.++.+.+.+.....++..++.++.+++.||+++|+ ..............++... .
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 294 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS-------LLRMGLILFAVSAVLLEITAI 294 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 7788888999998889999999999999999999999999999999999882 2222211111111111111 1
Q ss_pred -C-chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccc
Q 009757 419 -A-KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVEL 483 (526)
Q Consensus 419 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~ 483 (526)
. ...........+.....+...+.......+..|++++++.++.+.....++.+.+.+.+.+.+.
T Consensus 295 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~ 361 (385)
T TIGR00710 295 LGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGN 361 (385)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1 1122222222222222333344445555666678899999999999887777777777755443
No 37
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.3e-33 Score=278.44 Aligned_cols=395 Identities=14% Similarity=0.043 Sum_probs=277.5
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhh
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 180 (526)
...+.+..+...+....+.+.+|.+.++++.+..+.++..+++.+++.++++++|+++||+|||++++.+.++.+++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 18 PMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 33445555667778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHH
Q 009757 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (526)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~ 260 (526)
+.++ ++++.++++|+++|++.+...+....++.|++|+++|++++++......+|..+||.+++.+.++.|||+.|++
T Consensus 98 ~~~a--~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~ 175 (413)
T PRK15403 98 TLFT--TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI 175 (413)
T ss_pred HHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 9999 99999999999999998877777888999999999999999999999999999999999999988999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHH
Q 009757 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (526)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (526)
.++..++..+..++..||+++++++ +.......+++++++|||.++...+..++.....
T Consensus 176 ~~~~~~i~~~~~~~~lp~~~~~~~~---------------------~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~ 234 (413)
T PRK15403 176 IAVMGLIAFVGLLLAMPETVKRGAV---------------------PFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPM 234 (413)
T ss_pred HHHHHHHHHHHHHHhCCCCccccCC---------------------CCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 9888777666555555664332110 0001112346678899999999888888888888
Q ss_pred HHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCc
Q 009757 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (526)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (526)
+.+..+.|.++++.+|+++.+.++.......+..++..+.+++.+|..+++... ....+..++.+....... . ..+
T Consensus 235 ~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~--~~~~~~~ig~~l~~~~~~-~-~~~ 310 (413)
T PRK15403 235 MSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIW--RAVPIQLVGLALLIVGNL-L-WPH 310 (413)
T ss_pred HHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHH--HHHHHHHHHHHHHHHHHH-H-ccc
Confidence 888889999999988999999999887777777777777776654433321100 000111111111111111 1 122
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHH
Q 009757 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFL 500 (526)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 500 (526)
..+......++.....+...+........-.+..+|++.++.+.....+..+++...|++.+.. -...|...+++..+
T Consensus 311 ~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~ 388 (413)
T PRK15403 311 VWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG--GRLPFHLLAVVAGV 388 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHHHH
Confidence 2222222222222222223333332222222235899999999999999999999999988773 34444444444333
Q ss_pred HHHHHHHHhcCceeccccccccccC
Q 009757 501 SALFYIIFSTGERVNFDEAGEFLLL 525 (526)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (526)
.... .+.+..++.+.++..+..|.
T Consensus 389 ~~~~-~~~~~~~~~~~~~~~~~~~~ 412 (413)
T PRK15403 389 IVVF-TLAGLLNRVRQHQAAELAEE 412 (413)
T ss_pred HHHH-HHHHHHhhhhhhhhhhHhhc
Confidence 2222 22233333344444444444
No 38
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=1.5e-33 Score=276.37 Aligned_cols=366 Identities=16% Similarity=0.115 Sum_probs=274.8
Q ss_pred HHHHHHhhhhhhhhcchhh-hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHH-HHHHHHHHHhhhhh
Q 009757 106 LALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW-GVALWSLATFLTPW 183 (526)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~-~~~~~~~~~~~~~~ 183 (526)
+.+++..+......+.+|. +.+++|.|+.+.|++.+++.+...+.+++.|+++||+||||.+++ +.++..++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3456666666777787776 567899999999999999999999999999999999999887654 55666677778888
Q ss_pred ccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHH--HHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHH
Q 009757 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARA--VAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (526)
Q Consensus 184 ~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~ 261 (526)
+ ++++.+++.|++.|.+.+...|...+++.|+.|+++|++. .++...+.++|..+|+.+++.+.+.+|||+.|++.
T Consensus 84 ~--~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~ 161 (375)
T TIGR00899 84 N--RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTA 161 (375)
T ss_pred c--chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHH
Confidence 8 8999999999999988888888888999999887777654 67888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHH
Q 009757 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (526)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (526)
+++.++..++.++..||.|++.+.. + ...+.++.+++|+++...+..++......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYPRGAPGA--------------------L-----TRLEVRGLLASRDTRLLFVACTLMWGCNI 216 (375)
T ss_pred HHHHHHHHHHHHHhCCCcccCcccc--------------------c-----CcchhhhhhcCcchHHHHHHHHHHHHHHH
Confidence 8887777666666666654322100 0 01123346677777766665555555556
Q ss_pred HHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCch
Q 009757 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS 421 (526)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (526)
....+.|.|+++.+|.++.+.+.+.....+...++.++.|++.||+++|+ ....+.+...+........++
T Consensus 217 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~---------~~~~~~~~~~~~~~~~~~~~~ 287 (375)
T TIGR00899 217 LYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR---------LMLLAALAGVAFYTGLAADNS 287 (375)
T ss_pred HHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh---------HHHHHHHHHHHHHHHHHHHHH
Confidence 66778899998888999999998888777778888999999999999882 222222222222222222334
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHH
Q 009757 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLS 501 (526)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (526)
.+.......+.....+...+.......+..|++++++.|+.+...++|..++|.+.|.+.+..| +...+.+.+++.+++
T Consensus 288 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~ 366 (375)
T TIGR00899 288 LWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVA 366 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHH
Confidence 4433333333233333444556667788888888899999999999999999999999999887 888888888877777
Q ss_pred HHHHHHH
Q 009757 502 ALFYIIF 508 (526)
Q Consensus 502 ~~~~~~~ 508 (526)
.++...+
T Consensus 367 ~~~~~~~ 373 (375)
T TIGR00899 367 LFCLLLI 373 (375)
T ss_pred HHHHhee
Confidence 7665443
No 39
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=8.9e-34 Score=287.34 Aligned_cols=410 Identities=15% Similarity=0.120 Sum_probs=275.4
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhc-----CCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHH
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAH-----GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIM 167 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l 167 (526)
..+.+++.+.++.++.+..+++....+...|.+.+++ +.+..+.+++.+.+.++..++.+++|+++||+|||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~ 89 (502)
T TIGR00887 10 FGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY 89 (502)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 3456777888889999999999999999988887653 34566789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccccc------hHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHH
Q 009757 168 AWGVALWSLATFLTPWAADTS------LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (526)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig 241 (526)
.++.++..++.++++++ ++ ++.++++|+++|++.|...+....++.|++|+++|+++.++......+|.+++
T Consensus 90 ~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g 167 (502)
T TIGR00887 90 GMELIIMIIATVASGLS--PGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAG 167 (502)
T ss_pred HHHHHHHHHHHHHHHHc--cCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988887 54 78899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-----------------------hcCchhHHHHHHHHHHHHHHHHHhhccCCCCCC---CCCChhHHHHHH
Q 009757 242 LVLSPILMS-----------------------QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRH---PQISKYELEYIL 295 (526)
Q Consensus 242 ~~l~~~l~~-----------------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 295 (526)
+.++..+.. .++||+.|.+.++..++..+ ..+..||+|+.. .+.+++.++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~ 246 (502)
T TIGR00887 168 AIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMS 246 (502)
T ss_pred HHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHH
Confidence 998876542 24799999877776655443 456678888742 221111121111
Q ss_pred Hhcc---cccccC-C--CCCCCCCCchHHHHHcC---chH----HHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchh
Q 009757 296 REKQ---KPLLMG-N--KHKPATVIPPFRRLLSK---MPT----WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQA 362 (526)
Q Consensus 296 ~~~~---~~~~~~-~--~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 362 (526)
+... .....+ + +++++....++++++++ ++. +......+...+.+++...|.|.++++ .|++....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~ 325 (502)
T TIGR00887 247 AVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAA 325 (502)
T ss_pred HHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCcc
Confidence 1111 000000 0 00011112356677653 222 112223344445566777888999977 68875432
Q ss_pred hh------------HhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc--cCc-hhHHHHH
Q 009757 363 SW------------FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT--AAK-SPVMASA 427 (526)
Q Consensus 363 ~~------------~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~ 427 (526)
+. ...+..++.+++.++.+++.||+|||+ ....+..+.++....+. ... .......
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~---------~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 396 (502)
T TIGR00887 326 TNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKP---------IQLMGFFILTVLFFVLGFAYNHLSTHGFLA 396 (502)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh---------HHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 21 123334556678899999999999992 22222222222222111 100 1111111
Q ss_pred HHHHHHHH-HhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc---------hhHHHHHHHHH
Q 009757 428 WLTLAIGM-KSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG---------SFQGFLLLTSL 496 (526)
Q Consensus 428 ~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g---------~~~~~~~~~~~ 496 (526)
..++...+ .....+..+.+..|..| +.|+++.|+.+.++.++++++|.+.+++.+..+ ++...+++.++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 476 (502)
T TIGR00887 397 IYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFAL 476 (502)
T ss_pred HHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHH
Confidence 11121222 22233455666788888 689999999999999999999999999988531 13456666666
Q ss_pred HHHHHHHHHHHHhcCceec
Q 009757 497 LYFLSALFYIIFSTGERVN 515 (526)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~ 515 (526)
+.+++.+..++++++++++
T Consensus 477 ~~~~~~i~~~~lpEt~~~~ 495 (502)
T TIGR00887 477 FMFLGILFTLLIPETKGKS 495 (502)
T ss_pred HHHHHHHHheEeccCCCCC
Confidence 6666655555455554443
No 40
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=3.2e-33 Score=278.29 Aligned_cols=357 Identities=15% Similarity=0.114 Sum_probs=249.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHH-HHH-----HHHHHHhhhhhhHHHhHhcChHHHHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQ-SSF-----LWGYLVSPIAGGTLVDYYGGKIIMAWG 170 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~-s~~-----~~~~~~~~~~~G~l~dr~Grr~~l~~~ 170 (526)
|++....++++.+++++|+..+++..|.+.++++.++.+.+.+. +.. .++..+++++.|+++||+|||+.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 45568888899999999999999999999999999888765443 322 223347889999999999999999999
Q ss_pred HHHHHHHHhhhhhccccchH--------HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHH
Q 009757 171 VALWSLATFLTPWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGL 242 (526)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~ 242 (526)
.+++.++.++++++ ++++ .++++|+++|++.+...+....++.|++|+++|++++++...+.++|..+++
T Consensus 93 ~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 93 LSIMASGTLLIAFV--PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 8876 4688999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHH--------hhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCC
Q 009757 243 VLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVI 314 (526)
Q Consensus 243 ~l~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (526)
.+++.+. +.+|||++|++.++...+ . ++.....|+.. +...+ ++ +.+..
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~---~~~~~~~~e~~----~~~~~------------~~---~~~~~ 227 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-I---FLIRRSLEETE----EFLAR------------KH---RPSMR 227 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH-H---HHHHHhcCCCH----HHHHh------------hh---ccccc
Confidence 8887763 467999999875443211 1 11111111110 00000 00 00112
Q ss_pred chHHHHHcCchHHHH-HHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCc
Q 009757 315 PPFRRLLSKMPTWSI-IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (526)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (526)
+.++...++++.+.. .+..++....++.+..|.|.|+++.+|++..+.++...+..++..++.++.|++.||++||+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~-- 305 (434)
T PRK15075 228 EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRP-- 305 (434)
T ss_pred cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH--
Confidence 234444555555543 33344455667778899999999888999999998888888999999999999999999882
Q ss_pred cchhHHHHHHHHHHHHHHHH--H-hhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhH-
Q 009757 394 VTLTRKILQSIGFIAPGIAL--I-GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTF- 468 (526)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l- 468 (526)
... ..........+ + .....+..........+.....+...+.......|..| +.|+++.|+.+.+...
T Consensus 306 -----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~ 379 (434)
T PRK15075 306 -----VLI-AFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAI 379 (434)
T ss_pred -----HHH-HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHH
Confidence 111 11111111111 1 11122222222221122222223333444456667766 6899999997666654
Q ss_pred HHHHHHHHHhhhccccch
Q 009757 469 AAILGTVGAGFFVELVGS 486 (526)
Q Consensus 469 g~~~~~~~~g~l~~~~g~ 486 (526)
++.++|.+.|++.|..|.
T Consensus 380 ~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 380 FGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HhhhHHHHHHHHHHhcCC
Confidence 588899999999998873
No 41
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=5.9e-34 Score=278.24 Aligned_cols=354 Identities=14% Similarity=0.100 Sum_probs=273.9
Q ss_pred HHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhh
Q 009757 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (526)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 183 (526)
+....++..+......+.+|.+..+++.++.+.|++.+++.++..++++++|+++||+|||++++++.++.+++.++..+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 34556666777778888889999999999999999999999999999999999999999999999999999888888777
Q ss_pred cccc-----chHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHH
Q 009757 184 AADT-----SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (526)
Q Consensus 184 ~~~~-----~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f 258 (526)
. + +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++||.+++.+.+..|||+.|
T Consensus 84 ~--~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~ 161 (365)
T TIGR00900 84 V--ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAI 161 (365)
T ss_pred H--HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 7 6 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHH
Q 009757 259 VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (526)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (526)
++.++..++..+..+...++++++.+..+.++. ..++..+.++..+++|.++...+..++...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (365)
T TIGR00900 162 WVDAVGFAISALLIVSVRIPELAASEIQALSNA-----------------VLRDTREGIKFVLKNPLLRTLLLLALLFNL 224 (365)
T ss_pred HHHHHHHHHHHHHHHhcccccCCCccccccchh-----------------HHHHHHhHHHHHHcCcHHHHHHHHHHHHHH
Confidence 988776665554444333222111111000000 000112345678889999888887777777
Q ss_pred HHHHHH-HhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc
Q 009757 339 GFFVIL-SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (526)
Q Consensus 339 ~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (526)
...... .+.|.|.++.+|.+..+.+.+.....++..++.++.+++.||.+++ .....+....++......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~ 295 (365)
T TIGR00900 225 VFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM---------ALMTGAIFVIGLAILVVG 295 (365)
T ss_pred HHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh---------HHHHHHHHHHHHHHHHHH
Confidence 776666 8889999887899999999999999999999999999999999887 223333333333333333
Q ss_pred cCch-hHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc
Q 009757 418 AAKS-PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 418 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g 485 (526)
..+. .+...+..++.....+...+....+..+..| ++|+++.|+.+...+++..++|.+.|.+.|..|
T Consensus 296 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 296 LTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3332 3333333333333334445555666666655 799999999999999999999999999998754
No 42
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=5.4e-33 Score=275.30 Aligned_cols=370 Identities=15% Similarity=0.109 Sum_probs=270.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 176 (526)
....+..+++..+...+......+..|.+.+++|+++.+.|++.+.+.+++.+++++.|++.||+|||+++.++.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 44556667777788888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhh---hhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh-h-
Q 009757 177 ATFLT---PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-Q- 251 (526)
Q Consensus 177 ~~~~~---~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~- 251 (526)
+.+++ .++ ++++.++++|+++|+|.|...+..+.++.|+.|+++|...+++.+..+.+|..+++.+++.+.. .
T Consensus 104 ~~~l~~~~~~a--~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 104 GAALFWPAAEI--MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99875 356 8999999999999999999999999999998877777778999999999999999999876541 0
Q ss_pred ------------------------cCchhHHHHHHHHHH-HHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCC
Q 009757 252 ------------------------AGIFGPFVIFGLSGF-LWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGN 306 (526)
Q Consensus 252 ------------------------~gw~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (526)
.+||++|+....+.. +..++.+...|+.+++++ .
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~---------------------~ 240 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH---------------------S 240 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc---------------------c
Confidence 256666654443332 322222222222111100 0
Q ss_pred CCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHH
Q 009757 307 KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYF-NFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (526)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (526)
+++..+..+..++++++|.++...+..++..........|.+.|+ ++.+|+++.++++......++..+++++++++.|
T Consensus 241 ~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~ 320 (438)
T PRK10133 241 DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLIS 320 (438)
T ss_pred cccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111234456888999988877777777788888888999885 5668999999999999999999999999999999
Q ss_pred HHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHH
Q 009757 386 MLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTA 465 (526)
Q Consensus 386 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 465 (526)
|+++|+ .. ..+..+....++.....+..+. ...+.+.+.+.+...|..+....+..|++.+++.++.. +
T Consensus 321 r~g~~~-------~l--~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~ 389 (438)
T PRK10133 321 RFAPHK-------VL--AAYALIAMALCLISAFAGGHVG-LIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-M 389 (438)
T ss_pred HcCHHH-------HH--HHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-H
Confidence 999882 12 2222222222222222222222 22333334444555666666666767777788888886 4
Q ss_pred HhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHH
Q 009757 466 GTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFL 500 (526)
Q Consensus 466 ~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 500 (526)
..+|+.++|.+.|.+.|..|+.+..|++...+.+.
T Consensus 390 ~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 390 TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV 424 (438)
T ss_pred HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 55789999999999999876456666654444433
No 43
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.6e-33 Score=284.89 Aligned_cols=386 Identities=15% Similarity=0.143 Sum_probs=266.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (526)
+.+++.+..+++.++++.++.....+.+|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||++++++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45677888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
+++.+++++. ++++.+++.|++.|++.+...+....++.|++|+++|++++++...+.++|..+++.+++.+.+.++|
T Consensus 96 ~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 96 SVGTLACGFA--PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 9999999998 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCC-hhHHHHHHHhcccccccCCCCCCCCCCc------hHHHHH------
Q 009757 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQIS-KYELEYILREKQKPLLMGNKHKPATVIP------PFRRLL------ 321 (526)
Q Consensus 255 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~------ 321 (526)
|+.|++.++..++ .+......|+.++..+..+ +++.+...+... ..++....... .....+
T Consensus 174 ~~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (496)
T PRK03893 174 RALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKAPVRTMVDILY-----RGEHRIINILLTLAAAAALWFCFAGNLQN 247 (496)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccccchhHHHHHh-----cchhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999875443332 2222223333321110000 000000000000 00000000000 000000
Q ss_pred ----------------------c--C-chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHH
Q 009757 322 ----------------------S--K-MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFT 376 (526)
Q Consensus 322 ----------------------~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~ 376 (526)
+ + +.........+...........++|.|+++.+|++..+++.+.+...++..++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g 327 (496)
T PRK03893 248 AAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVG 327 (496)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHH
Confidence 0 0 00000111111111111235578999998778999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHh--hccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-c
Q 009757 377 GYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG--LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-Q 453 (526)
Q Consensus 377 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 453 (526)
.++.|++.||+++|+ ....+..+..+..+. .......+......++..+...........+..+..| +
T Consensus 328 ~~~~g~l~dr~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (496)
T PRK03893 328 CCVGGFLGDWLGTRK---------AYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTE 398 (496)
T ss_pred HHHHHHHHHHhcchH---------HHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHH
Confidence 999999999999882 222222222222221 1112222222222222112222223344455666666 6
Q ss_pred chhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 009757 454 YSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLY 498 (526)
Q Consensus 454 ~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (526)
++|+++|+.+....+|+.++|.+.|.+.|..| +...+...+++.
T Consensus 399 ~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~~~ 442 (496)
T PRK03893 399 QRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLSFSL 442 (496)
T ss_pred HhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHHHH
Confidence 89999999999999999999999999999988 766665544433
No 44
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.4e-34 Score=291.73 Aligned_cols=400 Identities=19% Similarity=0.142 Sum_probs=272.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCc--------cchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWS--------RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA 168 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 168 (526)
.+....++.+..+...++...+.+..+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~ 105 (481)
T TIGR00879 26 VALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL 105 (481)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH
Confidence 344445555666777788888888999998888777 889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcc-ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHH--
Q 009757 169 WGVALWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS-- 245 (526)
Q Consensus 169 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~-- 245 (526)
++.++..++.+++.+.. ..+++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 185 (481)
T TIGR00879 106 IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSG 185 (481)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999998885541 145668999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHhhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCC-CCChhHHHHHHHhcccccccC-------------CCCCC
Q 009757 246 -PILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-QISKYELEYILREKQKPLLMG-------------NKHKP 310 (526)
Q Consensus 246 -~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 310 (526)
..+.+..+||+.|++.++..++..+ ..++.||+|.... +.+.++.+....+........ ...+.
T Consensus 186 ~~~~~~~~~w~~~f~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (481)
T TIGR00879 186 KVSLNNTLGWRIPLGLQLIPAGLLFL-GLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEK 264 (481)
T ss_pred hhcCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 6666678999999996665554443 4445566553211 011111111100000000000 00000
Q ss_pred CCCCchHHHHHc------CchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHH
Q 009757 311 ATVIPPFRRLLS------KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLS 384 (526)
Q Consensus 311 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~ 384 (526)
......+++.++ .+.++...+..+........+..+.|.++++ +|++..+.+.......++.+++.++.+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 343 (481)
T TIGR00879 265 RSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLV 343 (481)
T ss_pred hhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011223332 1223333333333333344456677777766 799998888998999999999999999999
Q ss_pred HHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc-----cCc------hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-
Q 009757 385 DMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT-----AAK------SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP- 452 (526)
Q Consensus 385 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 452 (526)
||+++|+ ....+.+..++..+.+. ... .........++..++.....+.......+..|
T Consensus 344 d~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 414 (481)
T TIGR00879 344 DRFGRRP---------LLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPL 414 (481)
T ss_pred HHhcchH---------HHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCCh
Confidence 9999882 22222222222222221 111 22222222223333333333555666677777
Q ss_pred cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 453 QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 453 ~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
+.|+++.|+.+...+++.+++|.+.+.+.+..| +...|++.+++.+++.++.+++
T Consensus 415 ~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 415 SLRPKGISIAVAANWLANFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHHhee
Confidence 689999999999999999999999999999877 7777777777777666665543
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=1e-33 Score=287.35 Aligned_cols=373 Identities=18% Similarity=0.158 Sum_probs=286.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh
Q 009757 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (526)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 179 (526)
.+..++++.++..++.....+.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45667788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHH
Q 009757 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (526)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~ 259 (526)
+++++ ++++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++++.++++||+.|+
T Consensus 83 ~~~~~--~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVA--PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCc--CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 99999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCC-CChhHHH----------HHHHhccc-ccccC-------------------CCC
Q 009757 260 IFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELE----------YILREKQK-PLLMG-------------------NKH 308 (526)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~-~~~~~-------------------~~~ 308 (526)
+.+.+.++..++.++..|++++.... .+..+.. ....+..+ ..... .+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 98888777666666666654332211 1111000 00000000 00000 000
Q ss_pred CCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHH
Q 009757 309 KPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (526)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (526)
.++++..+ .+++++|.++...+..++.....+....++|.|+++.+|+++.++++......++..++.++.|++.||++
T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~ 319 (485)
T TIGR00711 241 TDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKID 319 (485)
T ss_pred cCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 01111122 26788999988888888888888888999999999989999999999999999999999999999999999
Q ss_pred hhcCccchhHHHHHHHHHHHHHHHHHhhc--c--CchhHHHHH-HHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHH
Q 009757 389 QRGTSVTLTRKILQSIGFIAPGIALIGLT--A--AKSPVMASA-WLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISN 463 (526)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 463 (526)
+| .....+..+.++....+. . ....+.... ..+.+.+......+.........++++++++.|+.+
T Consensus 320 ~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 390 (485)
T TIGR00711 320 PR---------KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSN 390 (485)
T ss_pred cH---------HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHH
Confidence 88 223333333333333322 1 122222222 233334433333344444455566689999999999
Q ss_pred HHHhHHHHHHHHHHhhhcccc
Q 009757 464 TAGTFAAILGTVGAGFFVELV 484 (526)
Q Consensus 464 ~~~~lg~~~~~~~~g~l~~~~ 484 (526)
....+|+.+|+.+.|.+.++.
T Consensus 391 ~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 391 FTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998753
No 46
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=9.6e-33 Score=270.45 Aligned_cols=360 Identities=15% Similarity=0.099 Sum_probs=265.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh
Q 009757 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (526)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 179 (526)
.+..+.++.++.........+.+|.+.+++|.|..++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~ 86 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCA 86 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566677777888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHH
Q 009757 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (526)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~ 259 (526)
+++++ ++++.++++|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+|+.+++.+.+...|...+.
T Consensus 87 ~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 164 (381)
T PRK03633 87 GLGLM--VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV 164 (381)
T ss_pred HHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH
Confidence 99998 9999999999999999999889888888899999999999999999999999999999999876543433332
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHH
Q 009757 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (526)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (526)
.+........+ ++. +.++++. ++ + ...+.++.+++|.++......+.....
T Consensus 165 -~~~~~~~~~~~-~~~-~~~~~~~---------------------~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (381)
T PRK03633 165 -TGLVLAAILPL-LFT-RILNQQA---------------------EN--H---DSTSIWPMLKLRQARLGVNGCIISGIV 215 (381)
T ss_pred -HHHHHHHHHHH-HHh-cccCCCC---------------------CC--C---CCCCHHHHHHhcchHHHHHHHHHHHHH
Confidence 22222211111 111 1111110 00 0 112345678888877655545555555
Q ss_pred HHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccC
Q 009757 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (526)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (526)
......++|.|+++ .|.+....+.+.+...++.+++++..+++.||+++|+ ....+.....+....+.
T Consensus 216 ~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~---------~l~~~~~~~~~~~~~~~-- 283 (381)
T PRK03633 216 LGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL---------VLRVQVFVVILGSIAML-- 283 (381)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH---------HHHHHHHHHHHHHHHHh--
Confidence 66677889999988 6999999999999999999999999999999999882 22222233222222222
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 009757 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLY 498 (526)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (526)
..........+++.+.. ...+.......+..| ++++...+..+...++|..++|.+.|++.|+.| +...|.+.+.+.
T Consensus 284 ~~~~~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~ 361 (381)
T PRK03633 284 SQAAMAPALFILGAAGF-TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVS 361 (381)
T ss_pred hhHHHHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHH
Confidence 11122222222333222 334455555555554 577778888888899999999999999999987 777887777666
Q ss_pred HHHHHH
Q 009757 499 FLSALF 504 (526)
Q Consensus 499 ~~~~~~ 504 (526)
++..+.
T Consensus 362 l~~~~~ 367 (381)
T PRK03633 362 FIYLLM 367 (381)
T ss_pred HHHHHH
Confidence 655443
No 47
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.8e-32 Score=269.97 Aligned_cols=355 Identities=16% Similarity=0.128 Sum_probs=256.1
Q ss_pred HHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhh
Q 009757 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (526)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 182 (526)
......+........+.+.+|.+.+++|.++.+.++..+.+.++..+++++.|+++||+|||+.+.++.++.+++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 34444455555666677889999999999999999999999999999999999999999999999999999999999998
Q ss_pred hccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHH
Q 009757 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (526)
Q Consensus 183 ~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~ 262 (526)
+. ++++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+.+..+||+.|++.+
T Consensus 87 ~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~ 164 (392)
T PRK10473 87 LA--ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMA 164 (392)
T ss_pred Hh--CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHH
Confidence 88 8999999999999999999999999999999999999999999999999999999999999888889999999998
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHH
Q 009757 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (526)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (526)
++.++..++.+...+|+++++++ ++....+..++.+++++++...+...+.......
T Consensus 165 ~~~~i~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (392)
T PRK10473 165 AMGILVLLLSLFILKETRPARAP-----------------------AASSKPRENSESLLNRFFLSRLVITTLSVTVILT 221 (392)
T ss_pred HHHHHHHHHHHHHcCCCCCcccC-----------------------CccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 88777766666666654322110 0001122345677888877666655555555556
Q ss_pred HHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchh
Q 009757 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP 422 (526)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (526)
+..+.|.++++.+|++..+.+.+.+...++.+++.++.+++.||+++|+ ....+.....+....+......
T Consensus 222 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~---------~~~~~~~~~~~~~~~~~~~~~~ 292 (392)
T PRK10473 222 FVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRT---------LMLTSQVLFLAAGITLALSPSH 292 (392)
T ss_pred HHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 6677788888878999999999999999999999999999999999882 2223333322222222222222
Q ss_pred HHHHH-HHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 009757 423 VMASA-WLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLY 498 (526)
Q Consensus 423 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (526)
+.... ..++..+... .. ......+..| ++++ |.......++..+++.+.+++.+..| +.......+.+.
T Consensus 293 ~~~~~~~~l~~~g~~~-~~--~~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g-~~~~~~~~~~~~ 363 (392)
T PRK10473 293 AVSLFGITLICAGFSV-GF--GVAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG-ISAWNMLIGILI 363 (392)
T ss_pred HHHHHHHHHHHHHHHH-Hh--HHHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHH
Confidence 22221 1222222221 11 1223344444 3332 44444455677777777777777776 443333434333
No 48
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=5.5e-33 Score=281.37 Aligned_cols=396 Identities=17% Similarity=0.156 Sum_probs=265.3
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhc--------CCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAH--------GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII 166 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~ 166 (526)
+..++...+..++.+..+++...+++..|.+.+++ +.++.+.+++.+.+.++..++++++|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 44567777788888999999999999999888877 8889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcc----------ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhh
Q 009757 167 MAWGVALWSLATFLTPWAA----------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS 236 (526)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 236 (526)
++++.+++.++.+++++.. .+.++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 9999999998888776520 123567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH--------hhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCC-CChhHHHHHHHhcccccccCCC
Q 009757 237 GNAIGLVLSPILM--------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ-ISKYELEYILREKQKPLLMGNK 307 (526)
Q Consensus 237 G~~ig~~l~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 307 (526)
|.++++.++..+. +.+|||+.|++.++..++..+. .++.||+|+.... .+.++.+...++....
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~------ 240 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGN------ 240 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCC------
Confidence 9999988876553 3568999999988877776544 4556776643111 1111111111111000
Q ss_pred CCCCCCCchHHHHHc-----CchHH-----HH----HHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHH
Q 009757 308 HKPATVIPPFRRLLS-----KMPTW-----SI----IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (526)
Q Consensus 308 ~~~~~~~~~~~~~~~-----~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 373 (526)
.+......+.++.++ .+..+ .. ....+......+....+.|.+.++ .|.+.....+.....++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~ 319 (479)
T PRK10077 241 TLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVIN 319 (479)
T ss_pred hhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHH
Confidence 000000001111111 00100 00 011111122233445566777766 7888877777777888889
Q ss_pred HHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc---cCchh-HHHHHHH-HHHHHHHhhhhhhHHHHHH
Q 009757 374 AFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT---AAKSP-VMASAWL-TLAIGMKSFSHSGFLVNLQ 448 (526)
Q Consensus 374 ~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 448 (526)
+++.++.+++.||++|| .....+.++..+..+.+. ..+.. ......+ +.+.++.....+.......
T Consensus 320 ~i~~~~~g~l~dr~g~r---------~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (479)
T PRK10077 320 LTFTVLAIMTVDKFGRK---------PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLS 390 (479)
T ss_pred HHHHHHHHHHHHHhcCh---------HHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhH
Confidence 99999999999999988 223333333333222221 11111 1222222 2222222223355677788
Q ss_pred hhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhc------cccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 449 EIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFV------ELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 449 ~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
|..| ++|+++.|+.+...+++.++++.+.+.+. +..| +...|++.+++.++++++.+.+
T Consensus 391 e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 391 EIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred hhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHHHHHHHHHHhc
Confidence 8877 69999999999999999999877766444 4555 4566666666555555554443
No 49
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=2.9e-32 Score=270.37 Aligned_cols=372 Identities=17% Similarity=0.136 Sum_probs=270.2
Q ss_pred HHHHHHHHHHhhhhhhhhcchhhhhhhcCCccch-----hhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHH
Q 009757 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSF-----SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 176 (526)
..+++..++.........+.+|.+.+++|.+..+ .|++.+++.++..++++++|+++||+|||+++..+.++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 3445556666777778888999999999988655 48999999999999999999999999999999999999999
Q ss_pred HHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchh
Q 009757 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (526)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~ 256 (526)
+.+++.+. ++++.+++.|++.|++.+ ..+....++.+++|+++|++++++...+..+|..++|.+++.+.+..+||+
T Consensus 97 ~~~~~~~~--~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 173 (408)
T PRK09874 97 VMVLMGLA--QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRP 173 (408)
T ss_pred HHHHHHHH--hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 99888888 899999999999999865 467788899999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHH-HHHHH
Q 009757 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII-VANAM 335 (526)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 335 (526)
.|++.+++.++..+..++..++++++.++.++ ...++..+.+++++++... ...+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENFQPVSKKEM-----------------------LHMREVVTSLKNPKLVLSLFVTTLI 230 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccccchhh-----------------------hHHHHHHHhCcCCchHHHHHHHHHH
Confidence 99999888777666666666554322111000 0011223455666665433 33333
Q ss_pred HHHHHHHHHHhHHHHHHHHhcCCcc---hhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHH
Q 009757 336 HSWGFFVILSWMPIYFNFVYHIDLR---QASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIA 412 (526)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (526)
.......+..+++.|..+..+.... ..+.+..+.+++..++.+..|++.||+++|+ ....+.....+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~---------~~~~~~~~~~~~ 301 (408)
T PRK09874 231 IQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK---------ILITALIFSVLL 301 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch---------hHHHHHHHHHHH
Confidence 4445555667788888875332221 2345556667788888999999999999882 222333333333
Q ss_pred HHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHH
Q 009757 413 LIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFL 491 (526)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~ 491 (526)
.+.....++.+......++.+...+...+.......+..| +++|+.+|+.+....+|..+||.+.|.+.+..| +...|
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f 380 (408)
T PRK09874 302 LIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVF 380 (408)
T ss_pred HHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHH
Confidence 3333333344443333333233333334444444455544 789999999999999999999999999999887 88999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 009757 492 LLTSLLYFLSALFYIIFS 509 (526)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~ 509 (526)
.+.+++.+++.+..+...
T Consensus 381 ~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 381 LVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 988888887776665543
No 50
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=6.5e-32 Score=266.82 Aligned_cols=350 Identities=18% Similarity=0.121 Sum_probs=264.9
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhh
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 180 (526)
+....+...+..+....+.+.+|.+.+++|.++++.+++.+++.++..++++++|+++||+|||+++..+.++..++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 87 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLG 87 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHH
Confidence 33344445555666778888899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHH
Q 009757 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (526)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~ 260 (526)
+.+. ++++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++++.+.+|||+.|++
T Consensus 88 ~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~ 165 (401)
T PRK11043 88 MLWV--ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFAT 165 (401)
T ss_pred HHHh--cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Confidence 9888 89999999999999998888888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHH
Q 009757 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (526)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (526)
.+++.++..+..++..++++++ + +++...++++++++|+++...+...+.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (401)
T PRK11043 166 LFAITLLLILPTLRLKPSKKAR-K-------------------------QSQDALTFKQLLKSKTYLGNVLIFAACSAAF 219 (401)
T ss_pred HHHHHHHHHHHHHHcCCCCCcc-c-------------------------cchHHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 8888777666555443332211 0 0011235678888888877666666666666
Q ss_pred HHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHH--Hhhcc
Q 009757 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL--IGLTA 418 (526)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 418 (526)
..+..+.|.++++ +|++..+.++......++..++.++.+++.||+++++.. ........+....+ .....
T Consensus 220 ~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 292 (401)
T PRK11043 220 FAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL------PWLLVLFAVSVIAIWLASLLS 292 (401)
T ss_pred HHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH------HHHHHHHHHHHHHHHHHHHhc
Confidence 7777889998877 799999999888888888899999999999999877210 11111111111111 11111
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccc
Q 009757 419 AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g 485 (526)
.+..+.......+.....+...+.......+..|+++|++.|+.++....++..++.+.|.+.+...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 359 (401)
T PRK11043 293 HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTPL 359 (401)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCCh
Confidence 2233323222222233333444444445555567889999999999999999999999999988643
No 51
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=1e-31 Score=264.80 Aligned_cols=354 Identities=16% Similarity=0.136 Sum_probs=272.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 176 (526)
.++.+.+..+..++..+....+.+.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++.++.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 45556666666667777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchh
Q 009757 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (526)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~ 256 (526)
+.+++.+. ++++.+++.|++.|++.+...+....+..|+++++++++++++...+..+|..++|.+++.+.+..|||+
T Consensus 86 ~~~~~~~~--~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 86 GTLVALFA--HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHH--ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 99998888 8999999999999999998888888999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHH
Q 009757 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (526)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (526)
.|++.++..++..++..+..||+++..++ +.+..+++++.+++|+++...+..+..
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETRPADAR------------------------RTRVLASYRTLLSNRRFNCYLLMLIGT 219 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCccccc------------------------hhHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 99998877766655555555554322110 001234566788888888766666666
Q ss_pred HHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhh
Q 009757 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (526)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (526)
......+..+.+.++++.+|++..+.+++.....++..++..+.+++.||.+++ ............+.....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~ 291 (394)
T PRK11652 220 LAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL--------MWQSVICCLLAGLLMWIP 291 (394)
T ss_pred HHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH
Confidence 666666677788899988899999999988888888888888888888888743 111112222222222111
Q ss_pred c--cCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhcccc
Q 009757 417 T--AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELV 484 (526)
Q Consensus 417 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~ 484 (526)
. .....+......++.....+...+.......+..|+++|++.++.+....+|..+++.+.+.+.+..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 292 GWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 1 1223333333333333333445566666667777889999999999999999999999999887653
No 52
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=5e-32 Score=265.64 Aligned_cols=363 Identities=16% Similarity=0.180 Sum_probs=266.2
Q ss_pred hhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHH
Q 009757 114 DRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALL 193 (526)
Q Consensus 114 ~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 193 (526)
...++.+.+|.+.+++|+++.+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.+. ++++.++
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~ 83 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA--QTIDQLI 83 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH--ccHHHHH
Confidence 44567789999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q 009757 194 AMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (526)
Q Consensus 194 ~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 273 (526)
+.|+++|++.+...+...+++.|++|+++|++++++......+|..++|.+++.+.+..+||+.|++.+++.++..+...
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888777666665
Q ss_pred hhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009757 274 SATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNF 353 (526)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (526)
+..||++++.++. +.+.+...+++++.+++|.++...+..++.......+..+.|.++.+
T Consensus 164 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (377)
T PRK11102 164 FFIPETLPKERRQ--------------------PFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIE 223 (377)
T ss_pred HhCCccCcccccC--------------------CCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 5555543221100 00001112355678889988887777777777777777888888888
Q ss_pred HhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHH-HHHHHHHHhhcc-CchhHHHHHHHHH
Q 009757 354 VYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF-IAPGIALIGLTA-AKSPVMASAWLTL 431 (526)
Q Consensus 354 ~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~ 431 (526)
.+|+++.+.+.+.....++..++.++.+++.||+++|+ ........ ...++.+..... ....+.......+
T Consensus 224 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T PRK11102 224 LNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALN-------MLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAA 296 (377)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-------HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 88999999999999999999999999999999999882 12211111 111222222211 1222322222222
Q ss_pred HHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHh-HHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 432 AIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGT-FAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
..+..............+..|+.++++.++.+.... ++..+++.+.+. .+. + +...+...+++.+.+++..++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 371 (377)
T PRK11102 297 FVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLA-PFT-S-AWPMVWSMAFCSILSILFYLYA 371 (377)
T ss_pred HHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHhc-cCC-C-hHHHHHHHHHHHHHHHHHHHHh
Confidence 222223333334445566778899999999877654 566666655443 222 2 3334444444444444444433
No 53
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.8e-32 Score=271.00 Aligned_cols=374 Identities=21% Similarity=0.251 Sum_probs=272.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (526)
+++++.+....+..+...++.....+..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+.++.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 44566677777777888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
+++.++..+. ++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..||
T Consensus 93 ~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 93 SVFTLLCALA--TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHc--cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 9999998888 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHH----hcccccc--cCCCCCCCCCCch-HHHHHcC---c
Q 009757 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILR----EKQKPLL--MGNKHKPATVIPP-FRRLLSK---M 324 (526)
Q Consensus 255 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~-~~~~~~~---~ 324 (526)
+..|++.+++.++..++.+...|++++.....++++.....+ +...... ..+++.+....+. .+.++++ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHH
Confidence 999999876666666666666666554221111111111111 0000000 0000011111112 2223332 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHH
Q 009757 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (526)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (526)
..+...+..++..........+.|.+.++ +|.+..+.+.......++..++.++.+++.||+++| .....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~ 320 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR---------VTALL 320 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH---------HHHHH
Confidence 33444455556666677778888855555 799999999999999999999999999999999877 11112
Q ss_pred HHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhh
Q 009757 405 GFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFF 480 (526)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l 480 (526)
................+.+......++.....+...+.......+..| ++|+++.|+.+.+..+|..++|.+.|++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 321 LLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 222222222222112333333333333333334445556667777766 6999999999999999999999999876
No 54
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=4.2e-32 Score=267.31 Aligned_cols=364 Identities=17% Similarity=0.147 Sum_probs=252.4
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhh-hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh
Q 009757 101 VSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 179 (526)
+..+.+..++.........+.+|. +.+++|.|..++|++.+++.++..++++++|+++||+|||+++.++.+...++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 333444556666666777788886 5688999999999999999999999999999999999999999998887776554
Q ss_pred hh---hhc---cccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Q 009757 180 LT---PWA---ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (526)
Q Consensus 180 ~~---~~~---~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g 253 (526)
.+ ++. ..++++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+||++++++.+.+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 32 221 115788999999999999999889999999999999999999999999999999999999999999899
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHH
Q 009757 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (526)
Q Consensus 254 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (526)
|+..+.+..+..++.... ....|+.++++ +++ .+.++.++ .++...+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------------------------~~~----~~~~~~~~--~~~~~~~~~ 225 (392)
T PRK12382 177 FAALALTTMVLPLLAWAF-NGTVRKVPAHA------------------------GER----PSLWSVVG--LIWKPGLGL 225 (392)
T ss_pred hHHHHHHHHHHHHHHHHH-HHhccCCCCCc------------------------ccC----chHHHHHH--HHHHhHHHH
Confidence 998776655443332221 11112111100 000 01122221 122222222
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHH
Q 009757 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL 413 (526)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (526)
++.......+..+.|.|+++ .|++ ..+.......++..+++++.|++.||+++|+. .. .+.....+..
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-------~~--~~~~~~~~~~ 293 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV-------AI--VSLLVETVGL 293 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-------hH--HHHHHHHHHH
Confidence 33344555667788888877 4665 35566667777788899999999999998732 22 2222222222
Q ss_pred HhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHh-hcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHH
Q 009757 414 IGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQE-IAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLL 492 (526)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~ 492 (526)
..+...++.+......++.....+...+.......+ .++++||++.|+.++...+|..++|.+.|++.|+.| +...|.
T Consensus 294 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~ 372 (392)
T PRK12382 294 LLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFL 372 (392)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHH
Confidence 223233344333333333222223333444444444 445899999999999999999999999999999987 899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009757 493 LTSLLYFLSALFYIIF 508 (526)
Q Consensus 493 ~~~~~~~~~~~~~~~~ 508 (526)
+.+++.+++.++.+..
T Consensus 373 ~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 373 AGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 8888887777665544
No 55
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=2.7e-33 Score=272.16 Aligned_cols=346 Identities=26% Similarity=0.387 Sum_probs=264.8
Q ss_pred HHHHHHHhhhhhhhhcchh-hhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhh
Q 009757 105 ALALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (526)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 183 (526)
++..++..+......+.+| .+.+++|.++.+++++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4566777777888888889 899999999999999999999999999999999999999999999999999999776667
Q ss_pred ccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHH
Q 009757 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (526)
Q Consensus 184 ~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~ 263 (526)
+ ++++.++++|++.|++.+...+...+++.|++|+++|++++++.....++|.++++.+++.+.+..+||+.|++.++
T Consensus 82 ~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 A--SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred h--hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 6 77889999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCc-hHHHHHcCchHHHHHHHHHHHHHHHHH
Q 009757 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIP-PFRRLLSKMPTWSIIVANAMHSWGFFV 342 (526)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (526)
+.++..++...+.++++++++..++++.+ ++.+.... .++.++++|.+|...+..++.......
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE---------------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSG 224 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT-----------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc---------------cccccccccccccccccchhhhhhhhhhHHHHHHHH
Confidence 98887775444444444333221111100 00111222 366778888887566666666667888
Q ss_pred HHHhHHHHHHHHhcCC-cchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHH-HHHHHHHHHHHHhhccCc
Q 009757 343 ILSWMPIYFNFVYHID-LRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQ-SIGFIAPGIALIGLTAAK 420 (526)
Q Consensus 343 ~~~~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 420 (526)
...+.|.|+++.+|++ ..+.+.+.++..+...++.++.+++.||++++ +.... ........+.+.......
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-------RRLLIAILLLILGALGLLLLPFSS 297 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHCCSHHHC
T ss_pred hhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999988879999 78999999999999999999999999998876 12222 222222222222222222
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHH
Q 009757 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGT 474 (526)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~ 474 (526)
+..+.....++.....+...+.......+..| +++|++.|+.+...+++..++|
T Consensus 298 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 298 SPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 33333333333333455556677777777766 7999999999999999999987
No 56
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1e-31 Score=264.00 Aligned_cols=353 Identities=14% Similarity=0.105 Sum_probs=256.6
Q ss_pred hhhhcchh-hhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHH
Q 009757 116 VVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (526)
Q Consensus 116 ~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 194 (526)
....+.++ .+.+++|.+..++|++.+...++..+.+++.|+++||+|||+++.++.++.+++.+++.+. ++++.+++
T Consensus 27 ~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~--~~~~~l~~ 104 (400)
T PRK11646 27 FVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA--HEPWLLWL 104 (400)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--ccHHHHHH
Confidence 34444444 4678899999999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHh
Q 009757 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (526)
Q Consensus 195 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 274 (526)
.|+++|++.+...+...+++.|++|+++|++++++.....++|..+||.+++++. .+|||+.|++.++..++..++..+
T Consensus 105 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~ 183 (400)
T PRK11646 105 SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAW 183 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888999999999999999999999999999999999999999998 679999999988877666555444
Q ss_pred hccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 009757 275 ATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFV 354 (526)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (526)
..|+.++++ .+++..+++++.+++|+++...+..+...........++|.|+++.
T Consensus 184 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 238 (400)
T PRK11646 184 LLPAYKLST-------------------------VRTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI 238 (400)
T ss_pred hCCcccccc-------------------------cchhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh
Confidence 444321110 0001123566788899887766655555444445567889999885
Q ss_pred hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHH-HHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHH
Q 009757 355 YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAI 433 (526)
Q Consensus 355 ~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (526)
+.++.+.+.+.+...++...+....+++.|| ++.+ + ....+....++..+.+...++.+.......+..
T Consensus 239 -~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~-------~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 308 (400)
T PRK11646 239 -AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE-------H--RLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFY 308 (400)
T ss_pred -cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-------H--HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4477788888777777666555555555554 4333 1 122333333333333333344433333222222
Q ss_pred HHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccch---hHHHHHHHHHHHHHHHHHHH
Q 009757 434 GMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGS---FQGFLLLTSLLYFLSALFYI 506 (526)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~---~~~~~~~~~~~~~~~~~~~~ 506 (526)
...+...+.......+..| +++|+++|+.+....+|..+||.+.|.+.|+.++ ....+...+++.+++.+...
T Consensus 309 ~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 309 IGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence 2233444555566666655 7999999999999999999999999999998642 34556665555555554443
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=8.2e-32 Score=264.06 Aligned_cols=373 Identities=14% Similarity=0.111 Sum_probs=266.3
Q ss_pred HHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhh
Q 009757 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW 183 (526)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 183 (526)
++++.++..+.........+.+.++++.++.+.+++.+.+.+++.++.+++|+++||+|||++++++.++.+++.+++++
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~ 87 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF 87 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH
Confidence 45556666665555566666778999999999999999999999999999999999999999999999999998888777
Q ss_pred ccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHH
Q 009757 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (526)
Q Consensus 184 ~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~ 263 (526)
. .+. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++||.+++++.+. .|+..+.+.+.
T Consensus 88 ~--~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~ 161 (393)
T PRK11195 88 G--IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCAL 161 (393)
T ss_pred H--HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 6 553 77899999999999999999999999999999999999999999999999999999885 47777776665
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHH
Q 009757 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (526)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (526)
..++.. +..+..|+.+.+.+..+.++... .+ +....++.++++|.+....+..++........
T Consensus 162 ~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 224 (393)
T PRK11195 162 IYLLAA-LFNLFIPRLGARRPGQSWNPIAL-LR---------------DFFHACRVLWRDKLGRFSLAGTTLFWGAGATL 224 (393)
T ss_pred HHHHHH-HHHhcCCCCcccccccCCCHHHH-HH---------------HHHHHHHHHHhCchhHHHHHHHHHHHHHHHHH
Confidence 544333 33344555443221111110000 00 00123456788887766555555555555666
Q ss_pred HHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhH
Q 009757 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (526)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (526)
....|.|+++.+|.++.+.|++.+...++.+++.++.+++.||.++++ ....+.. .+...+.+...++.+
T Consensus 225 ~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~---------~~~~g~~-~~~~~~~~~~~~~~~ 294 (393)
T PRK11195 225 RFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR---------VLPAGIL-MGLVVLLMALQHSLL 294 (393)
T ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc---------hHHHHHH-HHHHHHHHHHHhHHH
Confidence 677788888889999999999999999999999999999988766551 1222222 222222223333444
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHhhccc-c-hhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHH
Q 009757 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-Y-SGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLS 501 (526)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (526)
......++.+...+...+......++..|+ . +|++.++.+...+++..++..+.+.+ +..| ....+.+.++..+++
T Consensus 295 ~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 372 (393)
T PRK11195 295 PAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLVA 372 (393)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHHH
Confidence 333333222222333334455556667765 3 69999999999999999999999865 5556 667777766666666
Q ss_pred HHHHHHHhcC
Q 009757 502 ALFYIIFSTG 511 (526)
Q Consensus 502 ~~~~~~~~~~ 511 (526)
..+.+.++.+
T Consensus 373 ~~~~~~~~~~ 382 (393)
T PRK11195 373 LAMALLWRWH 382 (393)
T ss_pred HHHHHHHHHH
Confidence 6666555443
No 58
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9e-33 Score=273.24 Aligned_cols=405 Identities=20% Similarity=0.195 Sum_probs=328.1
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHH
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
...+.|.+++..++...........++.+.+.++++++.+.++++|+.++......+..++.+.+.||+|.|.+.+.|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 45567888888888888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccccchHHHHHH-HHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 009757 173 LWSLATFLTPWAADTSLLALLAM-RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (526)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~-r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~ 251 (526)
+.+++.++.+++ +++|++++. -++.|+|.|+.+.....++..|| +++|+.+.|+...+.++|.++-|.+...+.+.
T Consensus 120 v~~~g~~lssF~--~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~ 196 (509)
T KOG2504|consen 120 VAALGLLLSSFA--TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK 196 (509)
T ss_pred HHHHHHHHHHHH--hhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH
Confidence 999999999999 999988776 78999999999999999999998 59999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHH------------Hhcccc--cc-----------c-C
Q 009757 252 AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL------------REKQKP--LL-----------M-G 305 (526)
Q Consensus 252 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~--~~-----------~-~ 305 (526)
+|||+.+++.+.+.+-..+......|..+...+. ..++.+... ....+. .. . +
T Consensus 197 ~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (509)
T KOG2504|consen 197 YGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGP 275 (509)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCC
Confidence 9999999999999887777777777744433222 000000000 000000 00 0 0
Q ss_pred CCCCCCCCCchH----HHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHH
Q 009757 306 NKHKPATVIPPF----RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGG 381 (526)
Q Consensus 306 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g 381 (526)
++.......... .+++++|.++.+.+...+...++.....++|.|.++ +|++..+++.+.++.++...+++++.|
T Consensus 276 ~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G 354 (509)
T KOG2504|consen 276 DKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILG 354 (509)
T ss_pred ccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhh
Confidence 000000111112 478999999999999999999999999999999997 899999999999999999999999999
Q ss_pred HHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHH
Q 009757 382 LLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHG 460 (526)
Q Consensus 382 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g 460 (526)
++.|+...+ +..+..++++..++..+..+...+.+..+...++.+...+...........+..+ ++-..++|
T Consensus 355 ~laD~~~~~-------~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~G 427 (509)
T KOG2504|consen 355 LLADKPGIR-------ALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYG 427 (509)
T ss_pred hhcCccccc-------hHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHH
Confidence 999998855 3466677777777777777777776655555444444444444555555666665 88999999
Q ss_pred HHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009757 461 ISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFS 509 (526)
Q Consensus 461 ~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (526)
+...+..++..+||++.|++.|..|+|...|++++++.+++.+++++.+
T Consensus 428 l~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 428 LLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999999999999888777665
No 59
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=5e-31 Score=259.17 Aligned_cols=362 Identities=14% Similarity=0.100 Sum_probs=249.6
Q ss_pred HHHHHhhhhhhhhcchhh-hhhhcCCccchhhHHHHHHHH-HHHHhhhhhhHHHhHhcChHHH-HHHHHHHHHHHhhhhh
Q 009757 107 ALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIM-AWGVALWSLATFLTPW 183 (526)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~ 183 (526)
..++.........+.+|. +.+++|.+++++|++.+...+ +..++.+++|+ .||+||||.+ ..+.++.+++..+.++
T Consensus 23 ~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~ 101 (393)
T PRK15011 23 VAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAW 101 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 345555555566666655 578899999999999876655 55555555555 9999999875 5556666677777788
Q ss_pred ccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchh--hHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHH
Q 009757 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTER--ARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF 261 (526)
Q Consensus 184 ~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~ 261 (526)
+ ++++.+++.+.+.|...+...+...+++.++.++++| +...++.+.+.++|.++||++++.+.+++|||..|++.
T Consensus 102 ~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~ 179 (393)
T PRK15011 102 N--RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSA 179 (393)
T ss_pred h--hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHH
Confidence 8 8898877666555555567788888888988876555 34567888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcC-chHHHHHHHHHHHHHHH
Q 009757 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSK-MPTWSIIVANAMHSWGF 340 (526)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 340 (526)
++..++..+..++..||.+++++... + +. +. ..++ +..+......+......
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~~--------~~---~~~~~~~~~~~~~~~~~~~~~~ 232 (393)
T PRK15011 180 AVAFIVCGVMVWLFLPSMRKELPLAT-G---------------TL--------EA---PRRNRRDTLLLFVICTLMWGTN 232 (393)
T ss_pred HHHHHHHHHHHHhhcCccCCCCcccc-c---------------cc--------cc---cccccccHHHHHHHHHHHHHHH
Confidence 88877777666666666543221100 0 00 00 0011 22233333334444455
Q ss_pred HHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCc
Q 009757 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (526)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (526)
..+..+.|.|+++.+|++..+.+.+.+...++.+++.++.|++.||+++|+ .. ..+.....+.+......+
T Consensus 233 ~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~-------~~--~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK15011 233 SLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF-------LM--RVAAVAGVCFYAGMLMAH 303 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-------HH--HHHHHHHHHHHHHHHHHh
Confidence 556678999998888999999998888877888889999999999999882 11 222222222222222223
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHH
Q 009757 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFL 500 (526)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 500 (526)
+.+......++.....+...+.......+..|+++|++.++++...++|..++|.+.|.+.|..| +...+.+.+++.++
T Consensus 304 ~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~ 382 (393)
T PRK15011 304 SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIA 382 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHH
Confidence 34433333333333333333444556678888889999999999999999999999999999887 88888887777777
Q ss_pred HHHHHHHH
Q 009757 501 SALFYIIF 508 (526)
Q Consensus 501 ~~~~~~~~ 508 (526)
+.+..+..
T Consensus 383 ~~~~~~~~ 390 (393)
T PRK15011 383 TLFCLLRI 390 (393)
T ss_pred HHHHHHhh
Confidence 76666554
No 60
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=2.3e-31 Score=260.54 Aligned_cols=361 Identities=14% Similarity=0.057 Sum_probs=275.4
Q ss_pred HHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHH----HHHHHHHHHHHh
Q 009757 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIM----AWGVALWSLATF 179 (526)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----~~~~~~~~~~~~ 179 (526)
+.+.++..+.......|.+|.+.+++|.|..++|++.+++.+...++++++|+++||+|||... .++..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 4455666667777888999999999999999999999999999999999999999999985433 222222222 2
Q ss_pred hhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHH
Q 009757 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (526)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~ 259 (526)
.+.++ ++++.+++.|+++|.+.+...|...++..++ +++|+++++....+.++|.+++|++++.+.+++|||..|+
T Consensus 87 ~~~~~--~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~ 162 (382)
T TIGR00902 87 FSAGA--HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILA 162 (382)
T ss_pred HHHhh--hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHH
Confidence 33456 8899999999999999888899988887765 4788999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHH
Q 009757 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (526)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (526)
+.++..++ .+..+...|+.+++++. + +++....+++++++|+|+++...+..++....
T Consensus 163 ~~~~~~~~-~~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~ 220 (382)
T TIGR00902 163 ILTAGLAF-MLIGFLIKPTIPPKDAI-P--------------------EDESQGDSAFIALLKNPMNLRFLAAVCLIQGA 220 (382)
T ss_pred HHHHHHHH-HHHHHHcCCCCCCCccc-c--------------------ccccccchhHHHHHcChHHHHHHHHHHHHHHH
Confidence 87665333 22333333322111110 0 00111233567899999999999888888888
Q ss_pred HHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccC
Q 009757 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (526)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (526)
...+..+.|.|+++ .|.+..+.|.+.....++.+++..+.+++.||++.| ..+..+.+...+....+...
T Consensus 221 ~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~---------~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 221 HAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR---------DLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH---------HHHHHHHHHHHHHHHHHHhH
Confidence 88999999999988 899999999999988888999999999999999888 34456666666666666666
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHH-HHhHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 009757 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNT-AGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLY 498 (526)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (526)
++.+..+...++-....+...+....++++.+++++++++++++. ...+|..++|.++|++.|+.| + ..|...+++.
T Consensus 291 ~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~ 368 (382)
T TIGR00902 291 EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIA 368 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHH
Confidence 666666655555555555556666666777755688999999874 567999999999999999987 5 5566666666
Q ss_pred HHHHHH
Q 009757 499 FLSALF 504 (526)
Q Consensus 499 ~~~~~~ 504 (526)
+++.++
T Consensus 369 ~~~~~~ 374 (382)
T TIGR00902 369 AAAFFL 374 (382)
T ss_pred HHHHHH
Confidence 655443
No 61
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=5.1e-31 Score=264.86 Aligned_cols=379 Identities=15% Similarity=0.140 Sum_probs=276.6
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh-----cChHH-HHHHHHHH
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKII-MAWGVALW 174 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~ 174 (526)
...+.+..+..+.........+|.+.++.|.+..++|.+ +.....+ ++.+++|+++||+ ||||. ++++.++.
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 344555556666667788888999999999999999997 4444444 6899999999999 99885 66777777
Q ss_pred HHHHhhhhhcc-ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh-hc
Q 009757 175 SLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QA 252 (526)
Q Consensus 175 ~~~~~~~~~~~-~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~~ 252 (526)
+++...+++.. .++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++.+ ..
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~ 171 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYL 171 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 77777766652 24788899999999999999999999999999999999999999999999999999999999988 57
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHH
Q 009757 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVA 332 (526)
Q Consensus 253 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (526)
|||..|++.+++.++..+..++ .||+++..+. ++ +.++....++++.++++..|...+.
T Consensus 172 GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~---~~-----------------~~~~~~~~~l~~~~~~~~~~~~ll~ 230 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIATLL-APEPTDTIPV---PK-----------------TLEQAVVAPLRDFFGRNNAWLILLL 230 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh-cCCCcccccc---cc-----------------chhhhHHHHHHHHHcCcCHHHHHHH
Confidence 9999999998877766554443 4554321110 00 0000112356778888888777666
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhh-HhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHH-HHHH
Q 009757 333 NAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSA-VPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF-IAPG 410 (526)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~-~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~-~~~~ 410 (526)
.++..........+.++|+.+.+|++..+.+.+.. ...++.+++.+++|++.||+++|+ ........ .+..
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~-------~l~i~~~l~~l~~ 303 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFR-------ALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-------HHHHHHHHHHHHH
Confidence 66666666677788888987778999999999874 555789999999999999999872 12211111 1111
Q ss_pred HHHHhhccC-chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhH
Q 009757 411 IALIGLTAA-KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (526)
Q Consensus 411 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~ 488 (526)
..+..+... ++.+......++.....+...+.......+..+ +.+++.+|+.+....+|..+++.+.|++.|..| |.
T Consensus 304 l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~ 382 (491)
T PRK11010 304 AGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WP 382 (491)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hH
Confidence 111112222 233322222333222233334445566666666 588999999999999999999999999999987 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc
Q 009757 489 GFLLLTSLLYFLSALFYIIFST 510 (526)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~ 510 (526)
..|.+.+++.+.+++.....++
T Consensus 383 ~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 383 TFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988888888777766644
No 62
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=2.8e-32 Score=266.44 Aligned_cols=347 Identities=18% Similarity=0.200 Sum_probs=259.0
Q ss_pred HHHHHHHHHHhhhhhhhhcchhh-hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhh
Q 009757 102 SMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 180 (526)
...++.++........+.+..|. +.+++|+|+.+.+++.+++.+++.+++++.|+++||+|||+.+.++.++..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34566666777777889999995 88999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccc-chHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh---------
Q 009757 181 TPWAADT-SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS--------- 250 (526)
Q Consensus 181 ~~~~~~~-~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--------- 250 (526)
++++ + +++.+++.|+++|++.+. .+....++.|++|+++|++++++.....++|..+++.+++.+..
T Consensus 84 ~~~~--~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 160 (366)
T TIGR00886 84 AGLA--VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLP 160 (366)
T ss_pred HHHH--hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9998 8 999999999999999664 56678999999999999999999998888888888888776654
Q ss_pred -hcCchhHH-HHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHH
Q 009757 251 -QAGIFGPF-VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWS 328 (526)
Q Consensus 251 -~~gw~~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (526)
..+||+.| +..+++.++..++.+...++.|++.++.++.+. .. .....++......++.+++|+++.
T Consensus 161 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T TIGR00886 161 AHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSF------KG-----ARWSVGTGALGDQLKVFRDRHTWI 229 (366)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhccc------cc-----ccccccchhHHHHHHHHhccchhh
Confidence 24899999 444555555555555555554432211100000 00 000001111125567888999988
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHH
Q 009757 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (526)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (526)
..+..++.......+..+.|.|+++.+|+++.+++.+.....+...+++++.|++.||+++|+ ..........
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-------~~~~~~~~~~ 302 (366)
T TIGR00886 230 LALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR-------KLLMSFLGVA 302 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch-------hHHHHHHHHH
Confidence 888888777778888899999999989999999999999999999999999999999999872 2333333333
Q ss_pred HHHHHHhhccCc--hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHH
Q 009757 409 PGIALIGLTAAK--SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFA 469 (526)
Q Consensus 409 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 469 (526)
.+..++.+...+ +.+.......+.....+...........+..|+++|+++|+.+...++|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 303 MGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 333333333332 3333333333344444555566677777888899999999999888765
No 63
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.3e-32 Score=277.19 Aligned_cols=373 Identities=16% Similarity=0.100 Sum_probs=261.0
Q ss_pred cchhhhhhhcCCc---cchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009757 120 VAIVPLSLAHGWS---RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (526)
Q Consensus 120 ~~~~~l~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 196 (526)
+..|.+.+|++++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++.+++ ++++.++++|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS--PNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc--ccHHHHHHHH
Confidence 5678899999999 8999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc
Q 009757 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (526)
Q Consensus 197 ~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 276 (526)
++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. ++.
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999998877643 9999999988877766655 556
Q ss_pred cCCCCCCCC-CChhHHHHHHHh----cccccc-----c--CCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHH
Q 009757 277 SSTPDRHPQ-ISKYELEYILRE----KQKPLL-----M--GNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (526)
Q Consensus 277 ~~~~~~~~~-~~~~~~~~~~~~----~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (526)
||+|+.... .+.++..+..++ ...... . +++..+......+++++++|.++...+...+..+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 777643211 111121111111 000000 0 0000011123467889999988777665555444433333
Q ss_pred HhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCch--h
Q 009757 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS--P 422 (526)
Q Consensus 345 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 422 (526)
..++.+..+ .+.+. .......++..+++.++.+++.||++|| .......++.++..+.+...+. .
T Consensus 344 ~~~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr---------~~~~~~~~~~~~~~l~~~~~~~~~~ 410 (505)
T TIGR00898 344 YGLVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRR---------YTMAASLLLAGVALLLLLFVPVDLY 410 (505)
T ss_pred HHHhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHcCCCch
Confidence 333333333 44442 2333455677788999999999999988 2333333333333333322222 2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHH
Q 009757 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLS 501 (526)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (526)
+......++..+......+....+..|..| +.|+++.|+.+++..+|++++|.+.+ +.+ .+ ....+.+.+++.+++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~ 487 (505)
T TIGR00898 411 FLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KW-LFLPLVLFGGLALLA 487 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHH
Confidence 333333334444444455666777888888 68999999999999999999999998 443 33 455666666666666
Q ss_pred HHHHHHHhcCcee
Q 009757 502 ALFYIIFSTGERV 514 (526)
Q Consensus 502 ~~~~~~~~~~~~~ 514 (526)
.++.+++++++++
T Consensus 488 ~~~~~~lpet~~~ 500 (505)
T TIGR00898 488 GILTLFLPETKGV 500 (505)
T ss_pred HHHHHcCcCCCCC
Confidence 6666665554443
No 64
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-32 Score=265.41 Aligned_cols=293 Identities=19% Similarity=0.246 Sum_probs=252.9
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhhhhhhc-chhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHH
Q 009757 91 EFITSERVKVVSMLALALALCNADRVVMSV-AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW 169 (526)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 169 (526)
...++..+.++..++..++..+.+...++- .+..+.+|.+....+.+++.++++++++++.+++|.+.||++..+.+..
T Consensus 37 ~l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~ 116 (495)
T KOG2533|consen 37 KLLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSV 116 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHH
Confidence 334455667777778888888887765543 3555778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHH
Q 009757 170 GVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (526)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 249 (526)
..+++++..++.... +|++.+++.|++.|+..+..+|....+++.|+.+++|+..++++.+..++|.++|.+++..+.
T Consensus 117 ~~~~w~~~~~~~~~~--~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~ 194 (495)
T KOG2533|consen 117 SGILWGLFGFLTAAV--HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVF 194 (495)
T ss_pred HHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhh
Confidence 888888888777777 999999999999999999999999999999999999999999999999999999999998864
Q ss_pred ------hhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcC
Q 009757 250 ------SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSK 323 (526)
Q Consensus 250 ------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (526)
...|||+.|++.++++++..++.++..|+.|.+....+++|+....++.++.. .....++.++..+++.+++
T Consensus 195 ~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~d 272 (495)
T KOG2533|consen 195 KLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESP--SGGIENKFKWKGFKEALKD 272 (495)
T ss_pred hhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhcc--CCCcccccCHHHHHHHHhc
Confidence 34689999999999999999999999999999877777777654433333221 1111122677889999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHH
Q 009757 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML 387 (526)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~ 387 (526)
|.+|...++.++.....+++.+|+|.|+++..|++..++..+.....++++++.++.|+++||.
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996679999999999999999999999999999995
No 65
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=3e-31 Score=257.61 Aligned_cols=346 Identities=30% Similarity=0.470 Sum_probs=293.1
Q ss_pred HHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhh
Q 009757 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (526)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 182 (526)
.+.+..+..........+..|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+.++.++..++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34566677778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHH
Q 009757 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (526)
Q Consensus 183 ~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~ 262 (526)
+. ++++.++++|++.|++.+...+...+++.|++|+++|++.+++.....++|..+++.+++.+.+..+||+.+++.+
T Consensus 83 ~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 83 FA--SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA 160 (352)
T ss_pred Hh--ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 98 8999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHH
Q 009757 263 LSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFV 342 (526)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (526)
+..++..+...+.. |.++...+..++.......
T Consensus 161 ~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~ 193 (352)
T cd06174 161 ILGLLLALLLLFLL-----------------------------------------------RLLLLLALAFFLLSFGYYG 193 (352)
T ss_pred HHHHHHHHHHHHHH-----------------------------------------------HHHHHHHHHHHHHHhHHHH
Confidence 88777666554431 4566777788888888899
Q ss_pred HHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchh
Q 009757 343 ILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSP 422 (526)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (526)
...+.|.+.++.+|.+..+.+.......++..++.++.+++.||+++|+ . ....+.....+........++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~i~~~~~~~~~~~ 265 (352)
T cd06174 194 LLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR-------L-LLLIGLLLAALGLLLLALAPSL 265 (352)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------H-HHHHHHHHHHHHHHHHHHhccH
Confidence 9999999999977999999999999999999999999999999999882 0 3344444444444444444444
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHH
Q 009757 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLS 501 (526)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (526)
+......++.....+...+.......+..| ++|++..|+.+...+++..+++.+.|.+.|..| +...+.+.+++.+++
T Consensus 266 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~ 344 (352)
T cd06174 266 ALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAALALLA 344 (352)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHH
Confidence 444444444444445556667777777777 799999999999999999999999999998876 888888888887777
Q ss_pred HHHHH
Q 009757 502 ALFYI 506 (526)
Q Consensus 502 ~~~~~ 506 (526)
.+...
T Consensus 345 ~i~~~ 349 (352)
T cd06174 345 ALLLL 349 (352)
T ss_pred HHHhe
Confidence 66544
No 66
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=4.9e-31 Score=259.00 Aligned_cols=365 Identities=15% Similarity=0.111 Sum_probs=267.3
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhh
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 180 (526)
+.+++...+..++..+..++.+|.+++++|.++.+.|++.+.+.+++.+++++.|++.||+|||+++.++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45666777777888888899999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhhcc-ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh--------
Q 009757 181 TPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-------- 251 (526)
Q Consensus 181 ~~~~~-~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~-------- 251 (526)
+..+. .++++.+++.|++.|+|.|...+..+.++.++.|+++|++.+++.+...++|..+|+.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 54431 268999999999999999999999999999999999999999999999999999999999877532
Q ss_pred ------------------cCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCC
Q 009757 252 ------------------AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATV 313 (526)
Q Consensus 252 ------------------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (526)
.+||++|++.+++.++..++..+. +. |+.++. ++ ++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~~-p~~~~~-------------------~~--~~~~~ 221 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLT-KM-PALNHS-------------------DA--KQISF 221 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-CCCCcc-------------------cc--ccccc
Confidence 369999999888776655443322 21 111100 00 00111
Q ss_pred CchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh-cCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcC
Q 009757 314 IPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVY-HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGT 392 (526)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~ 392 (526)
..+.++++|+|+++...+..+++........++++.|.++.. +.+...++...+....+..+|+++++++.||+++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~- 300 (410)
T TIGR00885 222 SASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK- 300 (410)
T ss_pred hhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-
Confidence 224557889999999888888888888888899999997632 344444455666667788999999999999998872
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHH
Q 009757 393 SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAIL 472 (526)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~ 472 (526)
...+..++..+..+.....++.........++++...+. +..+....+..+++..++.+...+. .+|+++
T Consensus 301 --------~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~f-p~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~ 370 (410)
T TIGR00885 301 --------VLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMF-PTIYGIALKGLGQDTKYGAAGLVMA-IIGGGI 370 (410)
T ss_pred --------HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhHHHHHHH-Hhccch
Confidence 233333333333333333334333444444454444444 6666666655565444433333332 399999
Q ss_pred HHHHHhhhcccc-----chhHHHHHHHHHHHH
Q 009757 473 GTVGAGFFVELV-----GSFQGFLLLTSLLYF 499 (526)
Q Consensus 473 ~~~~~g~l~~~~-----g~~~~~~~~~~~~~~ 499 (526)
+|++.|.+.|.. |++...|++...+.+
T Consensus 371 ~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 371 VPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 999999999954 346677766544443
No 67
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-33 Score=261.74 Aligned_cols=380 Identities=16% Similarity=0.177 Sum_probs=292.0
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHH
Q 009757 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (526)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (526)
.+..++.+.++++...+++++++.+....+.+.+.+|++++..|++.+.+.+.+.+++|+.|+++|||+||+++.+|..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 34457788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Q 009757 174 WSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (526)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g 253 (526)
+.++.++++++ ..||+++++|.+.|+|.+...|..+++++|.+|.++|++++++++.+..+|..+|.+.+..+.+..+
T Consensus 108 W~~Av~~~~fs--~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 108 WTLAVFASGFS--NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999887665
Q ss_pred -chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHH
Q 009757 254 -IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVA 332 (526)
Q Consensus 254 -w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (526)
||+.|++.+++++++.++.+++.+|+++...++.+.+. .........+++.+.+.|+|.+....+.
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~-------------~~~~~~ts~~kDl~~l~~~~v~v~~sl~ 252 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGEN-------------KMVKPFTSVWKDLKVLAKIKVFVLSSLG 252 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCC-------------cCCCCccchHHHHHHHHccCceeeehHH
Confidence 99999999999999999999988887653221111100 1112334456777778888888888888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHH---hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchh--HHHHHHHHHH
Q 009757 333 NAMHSWGFFVILSWMPIYFNFV---YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLT--RKILQSIGFI 407 (526)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~--~~~~~~~~~~ 407 (526)
+....+....+.-|.|.++... .|.+.....++..+...++.+|.+++|.++||+.++..+.... .......+..
T Consensus 253 ~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~ 332 (493)
T KOG1330|consen 253 IIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAP 332 (493)
T ss_pred HHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhh
Confidence 8877777777777777666543 3556667777788888899999999999999987753331111 1122233333
Q ss_pred HHHHHHHhhccC--chhHHHHHHHHHHHHHHhhhhhhHHHHHH-hhcccchhhHHHHHHHHHhHH-HHHHHHHHhhhccc
Q 009757 408 APGIALIGLTAA--KSPVMASAWLTLAIGMKSFSHSGFLVNLQ-EIAPQYSGVLHGISNTAGTFA-AILGTVGAGFFVEL 483 (526)
Q Consensus 408 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~~lg-~~~~~~~~g~l~~~ 483 (526)
.....+.++... .+.+..+++++++.......+....-+.. -++|++|.+++++...+..+. .+-+|.+.|.+.|+
T Consensus 333 ~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~ 412 (493)
T KOG1330|consen 333 LSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK 412 (493)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence 333333333322 22333344444444444444444433333 445689999999988887754 45555599999987
Q ss_pred cchhH
Q 009757 484 VGSFQ 488 (526)
Q Consensus 484 ~g~~~ 488 (526)
.-++.
T Consensus 413 l~g~~ 417 (493)
T KOG1330|consen 413 LRGYK 417 (493)
T ss_pred hhCCC
Confidence 54343
No 68
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=5.6e-31 Score=255.73 Aligned_cols=334 Identities=16% Similarity=0.164 Sum_probs=249.3
Q ss_pred hhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHH
Q 009757 115 RVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (526)
Q Consensus 115 ~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 194 (526)
...+++.+|.+.+++|.+.++.|++.+++.++..+++++.|+++||+|||+++.++.++..++.+.+ .. ++++.+++
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~--~~~~~l~~ 92 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA--PGTALLFA 92 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh--ccHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999888888777 66 78999999
Q ss_pred HHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc--CchhHHHHHHHHHHHHHHHH
Q 009757 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVW 272 (526)
Q Consensus 195 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~~~~~~~ 272 (526)
.|++.|++.+...+....++.|++| ++|++++++.+...++|..+++.+++.+.+.. +||+.|.+.+++.++....
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~- 170 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA- 170 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH-
Confidence 9999999999888888889999986 68999999999999999999999999887764 3999988777654443222
Q ss_pred HhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 009757 273 LSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFN 352 (526)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (526)
..++.+++++. ++ .......++.+|+|.++...+..++....++....++|.|++
T Consensus 171 --~~~~~~~~~~~-------------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 225 (355)
T TIGR00896 171 --WIPQVRRRVAA-------------------NQ----TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILI 225 (355)
T ss_pred --HhhhhccccCC-------------------CC----CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222111100 00 001123346788888888777777777788888899999998
Q ss_pred HHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHH
Q 009757 353 FVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLA 432 (526)
Q Consensus 353 ~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (526)
+ +|++..+.+.+.+...++.++++++.|++.||+++|+ .....+.+...++.+.+.............+.+
T Consensus 226 ~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 296 (355)
T TIGR00896 226 S-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR--------GIVAVLAVLQLVGLCGLLFAPMHGLWAWALVLG 296 (355)
T ss_pred H-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch--------HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 8 6999999999999999999999999999999996541 222222222222222222222222222223333
Q ss_pred HHHHhhhhhhHHHHH-Hhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhH
Q 009757 433 IGMKSFSHSGFLVNL-QEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (526)
Q Consensus 433 ~~~~~~~~~~~~~~~-~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~ 488 (526)
.+.+ ...+...... .+..+ ++++...++.+...+++..++|.+.|++.|+.|+|.
T Consensus 297 ~~~g-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 297 LGQG-GAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred Hhhh-hHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 3332 3233333333 34443 577899999999999999999999999999988654
No 69
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=9.5e-31 Score=256.70 Aligned_cols=360 Identities=14% Similarity=0.102 Sum_probs=259.1
Q ss_pred HHHHHHhhhhhhhhcchh-hhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhc
Q 009757 106 LALALCNADRVVMSVAIV-PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (526)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 184 (526)
...++.........+.+| .+.+++|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.++.++.
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 444445555556555555 4567899999999999999999999999999999999999999999999999999988888
Q ss_pred cccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 009757 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (526)
Q Consensus 185 ~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~ 264 (526)
++++.++++|++.|.+.+...+...++..|.+|+++|++++++.....++|.++||.+++++.+ .+|+..|++.+++
T Consensus 94 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~ 170 (395)
T PRK10054 94 --NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAIC 170 (395)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHH
Confidence 8999999999999988888888899999999999999999999999999999999999998875 7999999998887
Q ss_pred HHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHH
Q 009757 265 GFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (526)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (526)
.++..++..+..++.++++++ + ++ ...+.++.+|+|+++...+..++.........
T Consensus 171 ~~i~~i~~~~~~~~~~~~~~~----~---------------~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 226 (395)
T PRK10054 171 SAFPLVFIQIWVQRSEKAIAT----E---------------TG-----SVWSPSVLLQDKALLWFTCSGFLASFVSGAFA 226 (395)
T ss_pred HHHHHHHHHHHHhcccccccc----c---------------hh-----hhhhhhhhccCceehHHHHHHHHHHHHHHHhh
Confidence 776655554444433221110 0 00 00122577889998888777777777766666
Q ss_pred HhHHHHHHHH--hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhcc-Cch
Q 009757 345 SWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA-AKS 421 (526)
Q Consensus 345 ~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 421 (526)
.+.+.|.... .+.+....+.+.....+.........+++.||.++| .....++....+.+..+.. .++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~ 297 (395)
T PRK10054 227 SCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR---------PLMTAGTLCFVIGLVGFIFSGNS 297 (395)
T ss_pred hhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch---------hHHHHHHHHHHHHHHHHHHcchH
Confidence 6777777543 345555667777776666666777888889988777 2233333333333333322 233
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHH
Q 009757 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFL 500 (526)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 500 (526)
.+.......+.........+.....+.+..| +.++++.+..+ ...+|..+||.++|.+.|+.| +...|.+.+.+..+
T Consensus 298 ~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~ 375 (395)
T PRK10054 298 LLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALAIVA 375 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHHHHH
Confidence 3322222222222233334455566666666 68899988765 677999999999999999997 66677665555444
Q ss_pred HHH
Q 009757 501 SAL 503 (526)
Q Consensus 501 ~~~ 503 (526)
+.+
T Consensus 376 ~~~ 378 (395)
T PRK10054 376 AWL 378 (395)
T ss_pred HHH
Confidence 433
No 70
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=100.00 E-value=4.2e-30 Score=251.73 Aligned_cols=357 Identities=12% Similarity=0.044 Sum_probs=261.3
Q ss_pred HHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcCh----HHHHHHHHHHHHHHhhhhh
Q 009757 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK----IIMAWGVALWSLATFLTPW 183 (526)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr----~~l~~~~~~~~~~~~~~~~ 183 (526)
++........+.+.+|.+.+++|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 344445556888899999999999999999999999999999999999999999994 3333332222 2223334
Q ss_pred ccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHH
Q 009757 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGL 263 (526)
Q Consensus 184 ~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~ 263 (526)
. +++|.+++.|++.|++.+...+...+++.++ +++|+++.+......++|..+||++++++.+++|||..|++.++
T Consensus 91 ~--~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 91 A--HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred c--ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 4 7899999999999999998899888888877 46788889999999999999999999999999999999988776
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHH
Q 009757 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (526)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (526)
..++..+. .+..|+.+++.+ + + ++.++...++++++|+|.++...+..++........
T Consensus 167 ~~~~~~~~-~~~~~~~~~~~~----~----------------~-~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~ 224 (382)
T PRK11128 167 GVASMLLG-QLLRPTIMPQGE----S----------------R-QQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAY 224 (382)
T ss_pred HHHHHHHH-HHccCCCCCccc----c----------------c-cccccccchHHHHHcChhHHHHHHHHHHHHHHhHhH
Confidence 55444333 333333211100 0 0 001112346789999999998888788777777778
Q ss_pred HHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhH
Q 009757 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (526)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (526)
..+.|.|+++ .|.+..+.+.+.+...++..+..++.+++.||++++ ..+..+.+..++..+.+...++.+
T Consensus 225 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T PRK11128 225 YGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR---------DLLLLSAICGVVRWGLMGSTTALP 294 (382)
T ss_pred HHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHhhhhHH
Confidence 8889999977 799999999999988888899999999999999888 233444455555444455555666
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHH-HhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHH
Q 009757 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTA-GTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSA 502 (526)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 502 (526)
..+...++.....+...+....+..+..++++++..++.+.. ..+|..+||.+.|.+.|..| . ..++..+++.++++
T Consensus 295 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 295 WLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHH
Confidence 555444443333444455555666666666778889988744 56777999999999999988 4 35555555555544
Q ss_pred HH
Q 009757 503 LF 504 (526)
Q Consensus 503 ~~ 504 (526)
++
T Consensus 373 ~~ 374 (382)
T PRK11128 373 FI 374 (382)
T ss_pred HH
Confidence 33
No 71
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=3.4e-30 Score=256.30 Aligned_cols=378 Identities=20% Similarity=0.173 Sum_probs=294.1
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhh
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 180 (526)
+..++.+.+++.+...+.....+.+..+..-|+...+++.++..+...+.++++|.++||++||++++.+.++.++..++
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 34455666677777778888888888888889999999999999999999999999999999999999999887765544
Q ss_pred hhhc---cccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhH
Q 009757 181 TPWA---ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (526)
Q Consensus 181 ~~~~---~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~ 257 (526)
.++. ...+.|.+++.-++.|++.+...|+.++++.+..|+++...++++.+...++..++||.++|.++..+|-.+.
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~ 171 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAA 171 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 3332 2257889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHH
Q 009757 258 FVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (526)
Q Consensus 258 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (526)
|.+.++..++..+......++.+++.. . +++........++.+.++|.+...++..++.+
T Consensus 172 f~inalsfl~~i~~l~~~~~~~~~~~~--~------------------~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~ 231 (524)
T PF05977_consen 172 FLINALSFLISILALLRWKPPPPPSSL--P------------------RERFFSALREGLRYVRSSPPLRSVLLRSFLFN 231 (524)
T ss_pred HHHHHHHHHHHHHHHHHcccccccccc--c------------------hhhhhhhHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 999887766655444443332211110 0 11111223446667777888777766666666
Q ss_pred HHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc
Q 009757 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (526)
+....+...+|.+.++.+|.++...|++.+..+++.++|.++.+++.+|++++ .++..+.+..++.++.+.
T Consensus 232 l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~---------~lv~~~~~~~a~~~~~la 302 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR---------RLVLLASLLFALALLLLA 302 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc---------hhhHHHHHHHHHHHHHHh
Confidence 66666778899999999999999999999999999999999999988887765 234455556666666677
Q ss_pred cCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHH
Q 009757 418 AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSL 496 (526)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~ 496 (526)
..++.+.....+++.+...........+..+...| +.+|+++++++++...+..+|..+.|.+.+..| ....+.+.++
T Consensus 303 l~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~ 381 (524)
T PF05977_consen 303 LSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGA 381 (524)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHH
Confidence 77777766665555444444555555566666666 699999999999999999999999999999998 6777777777
Q ss_pred HHHHHHHHHHHH
Q 009757 497 LYFLSALFYIIF 508 (526)
Q Consensus 497 ~~~~~~~~~~~~ 508 (526)
+.+++.++....
T Consensus 382 ~lll~~~~~~~~ 393 (524)
T PF05977_consen 382 ALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHh
Confidence 666666655544
No 72
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=2.5e-30 Score=255.35 Aligned_cols=358 Identities=17% Similarity=0.127 Sum_probs=255.4
Q ss_pred HHHhhhhhhhhcchhhhhhhcC--CccchhhHHHHH-----HHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhh
Q 009757 109 ALCNADRVVMSVAIVPLSLAHG--WSRSFSGIVQSS-----FLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (526)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~--~s~~~~g~~~s~-----~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 181 (526)
+.++++...++...+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||+++.++.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4567777788888888877754 455666665543 333445788999999999999999999999999999999
Q ss_pred hhccccchH--------HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHH----
Q 009757 182 PWAADTSLL--------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM---- 249 (526)
Q Consensus 182 ~~~~~~~~~--------~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~---- 249 (526)
+++ ++++ .++++|+++|++.+...+....++.|++|+++|++..++...+..+|.++++.++..+.
T Consensus 83 ~~~--~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 83 GLL--PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred hhC--CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 998 7764 48889999999999999999999999999999999999999999999999998887654
Q ss_pred ----hhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCch
Q 009757 250 ----SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMP 325 (526)
Q Consensus 250 ----~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (526)
+.++||+.|++.+++.++..+. ....+|+++..+ ++ ++++....+.++.+++++
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~----------------~~~~~~~~~~~~~~~~~~ 218 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEK-----AQ----------------EKHKKKRGPIRETLTKHR 218 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHH-----HH----------------hccccccCCHHHHHHhch
Confidence 3568999998877665544333 222333321110 00 001112234566777765
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHH
Q 009757 326 --TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (526)
Q Consensus 326 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (526)
++...+..++..........++|.|+++.+|.+..+.+.......++..++.++.+++.||+++|+ ....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~--------~~~~ 290 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP--------VLII 290 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH--------HHHH
Confidence 677777777777778888899999998878999999999999999999999999999999999882 1221
Q ss_pred HHHHHHHHH---HHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHH-HHHHhHHHHHHHHHHh
Q 009757 404 IGFIAPGIA---LIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGIS-NTAGTFAAILGTVGAG 478 (526)
Q Consensus 404 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~-~~~~~lg~~~~~~~~g 478 (526)
......... .......++.+......++.....+...+.......+..| ++|+++.|+. +....+|..++|.+.|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g 370 (394)
T TIGR00883 291 FTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAA 370 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHH
Confidence 221111111 1112222333333333333333344455566677777777 6899999985 4455688889999999
Q ss_pred hhccccchhHHHHHHHHHHH
Q 009757 479 FFVELVGSFQGFLLLTSLLY 498 (526)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~ 498 (526)
.+.|+.|.+...++...++.
T Consensus 371 ~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 371 ALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHcCcchhHHHHHHHHH
Confidence 99998875555555544433
No 73
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=2.9e-29 Score=247.59 Aligned_cols=374 Identities=11% Similarity=0.094 Sum_probs=263.7
Q ss_pred HHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh-----cChH-HHHHHHHHHHHH
Q 009757 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKI-IMAWGVALWSLA 177 (526)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~-~l~~~~~~~~~~ 177 (526)
....++.++.........+|.+.++.|+|.+++|++..+... .+..+++|+++||+ |||| .+.++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 455677777888888899999999999999999999777665 58899999999999 8775 788888888887
Q ss_pred Hhhhhhcc-ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh-cCch
Q 009757 178 TFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIF 255 (526)
Q Consensus 178 ~~~~~~~~-~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~-~gw~ 255 (526)
..+.++.. ..+++.+++..++.++..+...++..+++.|++|+++|+++.++...+.++|.++++.+++.+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 77777662 235788888888889888999999999999999999999999999999999999999999999885 5999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHH
Q 009757 256 GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAM 335 (526)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (526)
..|++.+++.++..+.. +..||++++.++. ++ .+++..+++++++|+|.++..++..++
T Consensus 162 ~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~-~~-------------------~~~~~~~~~~~l~~~~~~~~~l~~~~l 220 (402)
T PRK11902 162 NTYLLMAGLMLAGALTT-LWAPEPEVPARPP-RS-------------------LGEAVVGPLRDFFSRRGAWALLLLIVL 220 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCccccccc-ch-------------------hHHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 99999888776654433 3445443221110 00 000123467789999998887777666
Q ss_pred HHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhH-HHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHH-HHHHHHH
Q 009757 336 HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPW-SVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF-IAPGIAL 413 (526)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 413 (526)
..........+.+.++.+.+|+++.+.+++....+ ++.+++.++++++.||+++|+ ........ ....+.+
T Consensus 221 ~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~-------~l~~~~~~~~l~~l~~ 293 (402)
T PRK11902 221 YKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYR-------SLMLFGVLQAVSNLGY 293 (402)
T ss_pred HHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH-------HHHHHHHHHHHHHHHH
Confidence 66554444455566677768999999999876655 457899999999999999872 22111111 1111222
Q ss_pred HhhccC-chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHH
Q 009757 414 IGLTAA-KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFL 491 (526)
Q Consensus 414 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~ 491 (526)
..+... ++.+.......+.....+..............+ +..++..++.+....++..+++.++|.+.|..| +...|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f 372 (402)
T PRK11902 294 WVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYG-WPGFY 372 (402)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHH
Confidence 222222 333433333322222333333333333333333 344556677777778888878889999999998 88888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009757 492 LLTSLLYFLSALFYIIF 508 (526)
Q Consensus 492 ~~~~~~~~~~~~~~~~~ 508 (526)
...+++.++++++....
T Consensus 373 ~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 373 LMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888877776655443
No 74
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.98 E-value=9.2e-30 Score=252.76 Aligned_cols=379 Identities=15% Similarity=0.079 Sum_probs=244.3
Q ss_pred HHHHHHhhhhhhhhcchhhh-hhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhh-
Q 009757 106 LALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW- 183 (526)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~- 183 (526)
...++.....+...+.+|.+ .+++|++..++|++.+++.++..++++++|+++||+|||++++++..+.+++......
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444555555554 5559999999999999999999999999999999999999998876666554332211
Q ss_pred cccc-----chHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHH
Q 009757 184 AADT-----SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (526)
Q Consensus 184 ~~~~-----~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f 258 (526)
...+ .+...++++++.|.+.....+....+..+. .+++++.++......++|..++|++++.+.+ .+|+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f 173 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINF 173 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhH
Confidence 1001 111123334444444444344444443322 3466778889999999999999999998876 5899999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHH
Q 009757 259 VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (526)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (526)
++.+++.++..++.++..++++++.+.. ++ ++++++....++.++.+|+|.++...+..++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~ 237 (420)
T PRK09528 174 WLGSGSALILLVLLFFAKPDAPSTAKVA-NA---------------LGANASAVSLKDALALLKLPKFWFLVLYVIGVAC 237 (420)
T ss_pred HHHHHHHHHHHHHHhcccccccchhhhc-cc---------------hhcccccccHHHHHHHccCCCeEeehHHHHHHHH
Confidence 9988887776666555544433221100 00 0000111223455678889988776665555555
Q ss_pred HHHHHHHhHHHHHHHHh---cCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHh
Q 009757 339 GFFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (526)
Q Consensus 339 ~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (526)
.+.....+.|.|+.+.+ +.+..+.+.+.++..++..++.++.|++.||+++|+ ....+.++.++....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~---------~~~~~~~l~~~~~~l 308 (420)
T PRK09528 238 FYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN---------ALLLAGTIMAVRIIG 308 (420)
T ss_pred HHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch---------hhHHHHHHHHHHHHH
Confidence 55556667788877643 455567788888888889999999999999999983 223333333333333
Q ss_pred hccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHH-HHHHHhHHHHHHHHHHhhhccccchhHHHHHH
Q 009757 416 LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGI-SNTAGTFAAILGTVGAGFFVELVGSFQGFLLL 493 (526)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~-~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~ 493 (526)
....++++..+....+..............+..+..| +.+++..+. .++...+|.+++|.+.|++.|..| +...|..
T Consensus 309 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~ 387 (420)
T PRK09528 309 SGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLI 387 (420)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHH
Confidence 4444455544433333222222333333445555444 678877765 677788999999999999999988 8888888
Q ss_pred HHHHHHHHHHHHHHHhcCce
Q 009757 494 TSLLYFLSALFYIIFSTGER 513 (526)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~ 513 (526)
.+++.++..++.+...++++
T Consensus 388 ~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 388 LGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHHHHHHHHhcCCc
Confidence 87777666655555444433
No 75
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.98 E-value=6.7e-29 Score=223.55 Aligned_cols=372 Identities=17% Similarity=0.221 Sum_probs=288.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHH
Q 009757 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (526)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 177 (526)
+..+..+.+..+----.....+|.++.+.+++|+|.+..|++.++..+...+.+++..+++.|+|.++.+..++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33333333333333345567889999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc-Cchh
Q 009757 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFG 256 (526)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~-gw~~ 256 (526)
.++-... +.+.++.+-.+.|.|.+......++++.+.|| |+-+..+++|....++|..+++.+...+.++. |||.
T Consensus 91 ~~iR~~~---~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 91 ILIRSLG---GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHhcc---cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 9998774 67889999999999999999999999999996 78899999999999999999999999988877 7999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHH
Q 009757 257 PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMH 336 (526)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (526)
...+.+.++++.++.++....+ +. .. ..+....+-..++|+|..|.+.+.+.++
T Consensus 167 aL~~WAl~allAl~~WlPq~~r-~~-~~------------------------~~~~~~~~~~~vw~~~~aW~vtLfmGlq 220 (395)
T COG2807 167 ALGFWALLALLALLIWLPQALR-EQ-AA------------------------SIATKLVSVRKVWRSPLAWQVTLFMGLQ 220 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhccc-cc-cc------------------------ccccccccccccccCchhHHHHHHHHhh
Confidence 9999999988887776654211 10 00 0001111223688999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhh
Q 009757 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (526)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (526)
+..+|....|+|.++.| .|+|+.++|.+.+...+.+.+..+....+.+|...++ ........+..++++.+
T Consensus 221 S~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r--------~~~~~~~~~~l~G~~G~ 291 (395)
T COG2807 221 SLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR--------PLVVLALLLMLVGLVGL 291 (395)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc--------hHHHHHHHHHHHHHHHH
Confidence 99999999999999999 6999999999999999999999999999999865552 23333333333333333
Q ss_pred ccCchhHHHHHHHHHHHHHHhhhhhhHHHHHH-hhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHH
Q 009757 417 TAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQ-EIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTS 495 (526)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~ 495 (526)
.+.+........++++.+.++..+.....+.. ...|+..+.-.|+.+.++++-.+.||.+.|++.|..|+|...+....
T Consensus 292 ~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~ 371 (395)
T COG2807 292 LLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLA 371 (395)
T ss_pred HHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHH
Confidence 23322222222344555544444333333333 33457889999999999999999999999999999999998888877
Q ss_pred HHHHHHHHHHHHH
Q 009757 496 LLYFLSALFYIIF 508 (526)
Q Consensus 496 ~~~~~~~~~~~~~ 508 (526)
.+.++..+.-+..
T Consensus 372 ~~~i~m~i~Gl~a 384 (395)
T COG2807 372 LATLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHHHhhc
Confidence 7666655554443
No 76
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.98 E-value=8.8e-29 Score=226.37 Aligned_cols=359 Identities=16% Similarity=0.131 Sum_probs=278.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHH
Q 009757 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (526)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 178 (526)
..+..++...++.++......+.+|.+.+.++++..+.+++..+++.++.+.+++.|++.+|+|+|+.+++|+.++++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 44556667777778888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhc-cccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh------
Q 009757 179 FLTPWA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ------ 251 (526)
Q Consensus 179 ~~~~~~-~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~------ 251 (526)
.++.-+ ...+|..++++-++.|.|.+...++.+.++....++++-.+.+++.+..+++|.+++|++++.++..
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 987422 2278899999999999999999999999999999998899999999999999999999999988762
Q ss_pred -------------cCchhHHHHHHHHHHHHHHHHHhhc-cCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchH
Q 009757 252 -------------AGIFGPFVIFGLSGFLWVLVWLSAT-SSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF 317 (526)
Q Consensus 252 -------------~gw~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (526)
-.|+.+|...+...+++.+.....+ |+.++..+ + ..+......
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~---------------------~--~~~~~~~~~ 229 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAP---------------------S--LGASGSAGL 229 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccc---------------------c--ccccccchH
Confidence 2478888888877766665544432 22211111 0 001111156
Q ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchh
Q 009757 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLT 397 (526)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~ 397 (526)
.+++++|+++...+..+++......+.+|++.|+.+..|.+..+++...+.++.+.++|++++.++.+|+...
T Consensus 230 ~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~------- 302 (422)
T COG0738 230 SSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE------- 302 (422)
T ss_pred HHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-------
Confidence 6899999999999999999999999999999999998899999999999999999999999999999998776
Q ss_pred HHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHH
Q 009757 398 RKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGA 477 (526)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~ 477 (526)
+.+...++... +.++.....++.+......+++.+. +...|...+...+..|++...+. ..-.+.-.|+++.|.+.
T Consensus 303 -k~Laf~a~~~i-ll~~~~~l~~g~v~~~~l~~ig~F~-simfPTIfslal~~l~~~ts~~s-~~l~maivGGAiiP~l~ 378 (422)
T COG0738 303 -KYLAFYALIAI-LLLLAVALIGGVVALYALFLIGLFN-SIMFPTIFSLALKNLGEHTSVGS-GLLVMAIVGGAIIPPLQ 378 (422)
T ss_pred -HHHHHHHHHHH-HHHHHHHHhcChHHHHHHHHHHHHh-HHHHHHHHHHHHhccCccccccc-eeeeeheecchHHHHHH
Confidence 23333332322 2333333445555455445454444 45555555555555555444443 44456778999999999
Q ss_pred hhhccccchhHHHHH
Q 009757 478 GFFVELVGSFQGFLL 492 (526)
Q Consensus 478 g~l~~~~g~~~~~~~ 492 (526)
|++.|..|. ...+.
T Consensus 379 G~i~d~~g~-~~~~~ 392 (422)
T COG0738 379 GVIADMFGI-QLTFL 392 (422)
T ss_pred HHHHHhhhh-HHHHH
Confidence 999999883 33333
No 77
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.97 E-value=2.1e-28 Score=241.20 Aligned_cols=376 Identities=15% Similarity=0.078 Sum_probs=258.0
Q ss_pred HHHHHHHHHHhhhhhhhhcchhhh-hhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhh
Q 009757 102 SMLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 180 (526)
+.+...+++.+.....+.+.+|.+ .+++|.++.+.|++.+++.++..++++++|+++||+|||+.++.+.+..+++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~ 84 (396)
T TIGR00882 5 WMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAP 84 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 344455566666666777777765 4568999999999999999999999999999999999999998877766554432
Q ss_pred h---hhcc---ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 181 T---PWAA---DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 181 ~---~~~~---~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
. .+.. .+.++.+++.+++.|++.+...+....+..+.. ++++..++......++|.++||.+++.+.+ .+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~ 161 (396)
T TIGR00882 85 FFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDP 161 (396)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCc
Confidence 2 1110 012344567789999998888888888877754 334567788888889999999999998865 599
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHH
Q 009757 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (526)
Q Consensus 255 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (526)
|.+|++.+++.++..++.+...+++|+++.. ++ . .+.++++...++.++++|+|.++...+..+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~------~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 225 (396)
T TIGR00882 162 QIVFWLGSGFALILMLLLMFAKPKAPSSATV---AN-------A------LGANASAFSLKLALELFRQRKFWMFVLYVV 225 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCchhhhh---hc-------c------cccccCCCCHHHHHHHHcCCcHHHHHHHHH
Confidence 9999999888877766555544443321100 00 0 000111223356788999999887777766
Q ss_pred HHHHHHHHHHHhHHHHHHHHh---cCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHH
Q 009757 335 MHSWGFFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI 411 (526)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (526)
+....+.....+.+.|+++.+ +.+....+.+.+...+...++.+..+++.||+++|+ ...++..+.++
T Consensus 226 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~---------~l~~~~~l~~l 296 (396)
T TIGR00882 226 GVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN---------ALLIAGTIMSV 296 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---------hHHHHHHHHHH
Confidence 666666667778888888754 445566788888888888999999999999999883 22333333333
Q ss_pred HHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHH-HHHHHhHHHHHHHHHHhhhccccchhHH
Q 009757 412 ALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGI-SNTAGTFAAILGTVGAGFFVELVGSFQG 489 (526)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~-~~~~~~lg~~~~~~~~g~l~~~~g~~~~ 489 (526)
........++.+......++..............+..+..+ +.+++..+. .+....+|+.+++.+.|++.|..| +..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~ 375 (396)
T TIGR00882 297 RIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQG 375 (396)
T ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHH
Confidence 33333334455544333332222222222222333444444 566776665 678889999999999999999987 888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009757 490 FLLLTSLLYFLSALFYI 506 (526)
Q Consensus 490 ~~~~~~~~~~~~~~~~~ 506 (526)
.|.+.+++.++..++..
T Consensus 376 ~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 376 AYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 98888887776665543
No 78
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.1e-30 Score=234.91 Aligned_cols=345 Identities=20% Similarity=0.171 Sum_probs=272.0
Q ss_pred cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhh
Q 009757 129 HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALP 208 (526)
Q Consensus 129 ~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~ 208 (526)
.+-+++++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|++++..+++++++. ++++.+++.|.+||+|.+...+
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg--~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG--NSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc--chhHHHHHHHHHhhhhHHHHHh
Confidence 44567889999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred hhHHHHhhhcCcc-hhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 009757 209 AMNNMVARWFPQT-ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQIS 287 (526)
Q Consensus 209 ~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (526)
+..++++|.+|++ +|++++|+.-.+.++|.++||++||.+++..|.+.+|++.+++.++-.++.++..+....+.+
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~--- 255 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD--- 255 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc---
Confidence 9999999999866 579999999999999999999999999999999999999999999888887777654322211
Q ss_pred hhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhh
Q 009757 288 KYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSA 367 (526)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 367 (526)
......++++++++|.++.........+.........++.+..|.+..+.-+.|+...
T Consensus 256 ----------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fL 313 (464)
T KOG3764|consen 256 ----------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFL 313 (464)
T ss_pred ----------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeec
Confidence 1222346779999999998877777777777777788889888888855558999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHH-HHHHHHhhhhh---hH
Q 009757 368 VPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLT-LAIGMKSFSHS---GF 443 (526)
Q Consensus 368 ~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~ 443 (526)
...+...++..+.|.+.||++.. |......+++..+.........++....++-.+ ++.+....... ..
T Consensus 314 p~~~~y~ig~~lfg~la~k~~~~-------~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l 386 (464)
T KOG3764|consen 314 PASLSYAIGTNLFGKLADKYPHL-------RWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTL 386 (464)
T ss_pred ccccchhccCchHHHHHHhcCch-------hHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999955 235556666666665555555554433222221 22222212111 12
Q ss_pred HHHHHhhccc---chhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 444 LVNLQEIAPQ---YSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 444 ~~~~~~~~~~---~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
...+.....+ ..|..+++......+|.++||.++|.+.+..| +.+.....++..++-.-++..+
T Consensus 387 ~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG-F~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 387 GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG-FEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh-HHHHHHHHHHHHHHHHHHHHHH
Confidence 2222211122 57899999999999999999999999999998 8877777777666555444444
No 79
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=2.9e-28 Score=240.47 Aligned_cols=370 Identities=13% Similarity=0.021 Sum_probs=251.2
Q ss_pred HHHHHHHHhhhhhhh-hcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcC-hHHHHHHHHHHHHHHhhh
Q 009757 104 LALALALCNADRVVM-SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVALWSLATFLT 181 (526)
Q Consensus 104 ~~~~~~~~~~~~~~~-~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~~~ 181 (526)
+++.+++.+.....+ ++..+.+.+++|++..++|++.+++.++..++++++|+++||+|+ |+++.++.++.+++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 345556666666666 444555667799999999999999999999999999999999965 778888888888888888
Q ss_pred hhccccchHHHHHHHHHhhhhccchhhhhHHHHhhh--------cCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Q 009757 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARW--------FPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (526)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g 253 (526)
.+. ++++.+++.|++.|++.+...+...++...+ .....|.+..| .+|.++|+.+++.+....+
T Consensus 87 ~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~ 158 (418)
T TIGR00889 87 AQV--TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELS 158 (418)
T ss_pred HHh--cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccch
Confidence 888 8999999999999998887777766654322 22223444444 4788899998887733323
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHH
Q 009757 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVAN 333 (526)
Q Consensus 254 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (526)
|+ +|++.++..++..+. .+..||.|+..++.+.+ .++....+.++++|+|+++.+.+..
T Consensus 159 ~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~-------------------~~~~~~~~~~~~~k~~~~~~~~~~~ 217 (418)
T TIGR00889 159 NI-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKMS-------------------IKVMLGLDAFILFKNKRMAIFFFFS 217 (418)
T ss_pred hH-HHHHHHHHHHHHHHH-HhcCCCCCCCccccccC-------------------HHHHhhhhHHHHhcCCCeeeHHHHH
Confidence 44 466666655555544 34455554321110000 0000111345688999988887777
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhcCCc--------chhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHH
Q 009757 334 AMHSWGFFVILSWMPIYFNFVYHIDL--------RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (526)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (526)
++..........+.+.|+++ .|.++ ...+...+...+..+++.+..+++.||+++| ..+..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r---------~~l~~~ 287 (418)
T TIGR00889 218 MLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK---------KVMLLS 287 (418)
T ss_pred HHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHH
Confidence 77766666677888888877 56554 4568888888899999999999999999988 333444
Q ss_pred HHHHHHHHHhhcc-Cch---hHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHH-HHHhHHHHHHHHHHhh
Q 009757 406 FIAPGIALIGLTA-AKS---PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISN-TAGTFAAILGTVGAGF 479 (526)
Q Consensus 406 ~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~-~~~~lg~~~~~~~~g~ 479 (526)
.++.++....+.. ... .+..+...++.....+...+....++.+..| ++|++++|+.+ ....+|.++||.+.|+
T Consensus 288 ~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~ 367 (418)
T TIGR00889 288 LVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGV 367 (418)
T ss_pred HHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4444443333222 111 1222222222222233444555566666666 79999999997 5678999999999999
Q ss_pred hccccch-----hHHHHHHHHHHHHHHHHHHHHHhcCc
Q 009757 480 FVELVGS-----FQGFLLLTSLLYFLSALFYIIFSTGE 512 (526)
Q Consensus 480 l~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (526)
+.|+.|+ |+..|.+.+++.+++.+++.++.+++
T Consensus 368 l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 368 MVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9998653 78888888777777666665554443
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=6.3e-29 Score=276.64 Aligned_cols=370 Identities=15% Similarity=0.060 Sum_probs=251.7
Q ss_pred HHHHHHHHhhhhhhhhcch-hhhhhhcCCcc-chhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHH---HHHHHHHHH
Q 009757 104 LALALALCNADRVVMSVAI-VPLSLAHGWSR-SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAW---GVALWSLAT 178 (526)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~---~~~~~~~~~ 178 (526)
.++..+.+.+....+.... ..+..+.+.+. ...++..+++.+++.++++++|+++||+|||+++.. +.++..+..
T Consensus 20 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~ 99 (1140)
T PRK06814 20 QFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALA 99 (1140)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHH
Confidence 3444444444443333332 23444444333 457888999999999999999999999999997643 222222223
Q ss_pred hhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHH
Q 009757 179 FLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (526)
Q Consensus 179 ~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f 258 (526)
+..... ++++.++++|+++|++.+...|+..+++.+++|+++|++++++.+++.++|.++||++++++....+|++.|
T Consensus 100 ~~~~~~--~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~ 177 (1140)
T PRK06814 100 IYGFHL--NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV 177 (1140)
T ss_pred HHHHHH--hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 333344 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHH
Q 009757 259 VIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSW 338 (526)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (526)
+..++..++..++ .+..++.+........+. .........++.+.++|.++...+..++.++
T Consensus 178 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1140)
T PRK06814 178 ALLMGIAVLGWLA-SLFIPKTGNAAPDLKIDR-----------------NIIRSTITLLKYAKADKRIWLAILGISWFWL 239 (1140)
T ss_pred HHHHHHHHHHHHH-HhhCCCCCCCCCCCeecc-----------------chHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 5554444444333 333444332211100000 0000112356788899999999888888888
Q ss_pred HHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhh--
Q 009757 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL-- 416 (526)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 416 (526)
....+..++|.|+++.+|.+....+++.+...++.++|.++.|++.++..+++.. ....+...+..+.+...
T Consensus 240 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~ 313 (1140)
T PRK06814 240 VGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYV------PIGALLMGLFGLDLAFASS 313 (1140)
T ss_pred HHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeee------hHHHHHHHHHHHHHHhccc
Confidence 8888889999999998999999999999999999999999999998876655211 11111111111111110
Q ss_pred ---------------ccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhh
Q 009757 417 ---------------TAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFF 480 (526)
Q Consensus 417 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l 480 (526)
....+.+...+..++.+.+.+...+...+..++..| +.+|+++|+.+++..++..+++.+.|.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 314 SVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred ccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 011333333333333333334444445556565555 7999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHH
Q 009757 481 VELVGSFQGFLLLTSLLYF 499 (526)
Q Consensus 481 ~~~~g~~~~~~~~~~~~~~ 499 (526)
.+...++...+++.+++.+
T Consensus 394 ~~~~~~~~~~~~~~~~~~~ 412 (1140)
T PRK06814 394 QALGFSIPWIILFIALANL 412 (1140)
T ss_pred HHhccCHHHHHHHHHHHHH
Confidence 8654446666555444433
No 81
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.97 E-value=5.1e-29 Score=255.71 Aligned_cols=289 Identities=16% Similarity=0.182 Sum_probs=226.4
Q ss_pred HHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhh
Q 009757 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 181 (526)
+..++..+.........+..++.+.++|+++..+.|++.+.+.++++++.++.|++.||+|||+.+.++.++++++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44455667777777888999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhcc-------------------------------------------------ccchHHHHHHHHHhhhhccchhhhhHH
Q 009757 182 PWAA-------------------------------------------------DTSLLALLAMRAVVGLAEGVALPAMNN 212 (526)
Q Consensus 182 ~~~~-------------------------------------------------~~~~~~l~~~r~l~Gig~g~~~~~~~~ 212 (526)
++.. ...+..++++|+++|+|.+..++...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 7751 002566789999999999999999999
Q ss_pred HHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc----------------------CchhHHHHHHHHHHHHHH
Q 009757 213 MVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA----------------------GIFGPFVIFGLSGFLWVL 270 (526)
Q Consensus 213 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~----------------------gw~~~f~~~~~~~~~~~~ 270 (526)
++.|++|+++|+++++++..+..+|.++|+++++++.+.+ +|+..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987643 267778888888777666
Q ss_pred HHHhhccCCCCCCCCCChhHHHHHH-HhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHH
Q 009757 271 VWLSATSSTPDRHPQISKYELEYIL-REKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPI 349 (526)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (526)
.++++.++.|+...+.+.++.+... ................+....++.+++||.++...+..++.....+++.+|+|.
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~ 355 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK 355 (633)
T ss_pred HHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555544444322111100000000 000000000000001112345678999999999999999999999999999999
Q ss_pred HHHHHhcCCcchhhhHhhHhHH-HHHHHHHHHHHHHHHHHhh
Q 009757 350 YFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 350 ~~~~~~g~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~~~~ 390 (526)
|+++.+|+++.+++++.....+ +.+++.+++|++.||++.+
T Consensus 356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 9999999999999999887776 5688999999999999855
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=1.1e-27 Score=267.87 Aligned_cols=356 Identities=18% Similarity=0.139 Sum_probs=248.3
Q ss_pred hhhhcchhhhhhhcCCcc--chhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhh---hhccccchH
Q 009757 116 VVMSVAIVPLSLAHGWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLL 190 (526)
Q Consensus 116 ~~~~~~~~~l~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~ 190 (526)
.....+.+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++.+++.++. ... ++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~ 104 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL--GWFW 104 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH--ccHH
Confidence 344455566666666654 447999999999999999999999999999999999887766555443 334 6799
Q ss_pred HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh--------c-CchhHHHHH
Q 009757 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--------A-GIFGPFVIF 261 (526)
Q Consensus 191 ~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~--------~-gw~~~f~~~ 261 (526)
.++++|+++|++.+...++..+++.|++|+++|++++++...+.++|.++|+++++++.+. + +|++.+.+.
T Consensus 105 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 184 (1146)
T PRK08633 105 LAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLV 184 (1146)
T ss_pred HHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 2 344444444
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHH
Q 009757 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (526)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (526)
++...+..++..+..|+.++......+. ............++.+++++.++...+..++......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (1146)
T PRK08633 185 LLAVAVLGLIFAYRLPKVPAAAPEVFDK---------------KKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQ 249 (1146)
T ss_pred HHHHHHHHHHHHhcCcCCCCCCcccccc---------------cccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 4333333333334445544332211000 0000011122356678888988888777777777777
Q ss_pred HHHHhHHHHHHHHhcCCcc-hhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCc
Q 009757 342 VILSWMPIYFNFVYHIDLR-QASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (526)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~-~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (526)
.+..++|.|+++.+|++.. ..+++.+...++.+++.++.+++.||+++++ ...++.++.++.++.+....
T Consensus 250 ~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~---------~~~~~~~~~~~~~~~~~~~~ 320 (1146)
T PRK08633 250 LAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG---------LVPLGALGLALSLFLLPTAP 320 (1146)
T ss_pred HHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc---------chhHHHHHHHHHHHHHHHhh
Confidence 7888999999998999998 8999999999999999999999999988762 22223333333333333333
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHH
Q 009757 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLL 497 (526)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (526)
+.+..++..++.+...+...+....+..+..| +.||+++|+.+++..++.++++.+.+.+......+...+++.+.+
T Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 321 SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 44443333333333333444455566666655 799999999999999999888877766644211233444444443
No 83
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=1e-27 Score=232.97 Aligned_cols=320 Identities=13% Similarity=0.092 Sum_probs=232.7
Q ss_pred hhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh-----cChHH-HHHHHHHHHHHHhhhhhcc-ccc
Q 009757 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-----GGKII-MAWGVALWSLATFLTPWAA-DTS 188 (526)
Q Consensus 116 ~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~~-~~~ 188 (526)
...++..|.+.+|+|+|.+++|++.+. .+...+ .+++|+++||+ ||||. ++.+.++.+++..+.++.. ..+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999766 555555 99999999998 89886 5677777777766666652 135
Q ss_pred hHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC--------chhHHHH
Q 009757 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG--------IFGPFVI 260 (526)
Q Consensus 189 ~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g--------w~~~f~~ 260 (526)
++.+....++.+++.+...++..+++.|++|+|+|+++.++...+.++|.++++.+++.+.+..+ ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 66677788888999899899999999999999999999999999999999999999999988888 9999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCch---HHHHHHHHHHHH
Q 009757 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMP---TWSIIVANAMHS 337 (526)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 337 (526)
.++..++..+..++..||+++..+. ++++. .+..+.+++++++|. ++...+..++..
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~-~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASV-PKPLT-------------------QAVLKPIREFFQRKNMIQALLLLLLIVLYK 222 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCccccc-chhHH-------------------HHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 9887777665555555553321111 00000 001235567777775 676777777777
Q ss_pred HHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhH-HHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHh-
Q 009757 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPW-SVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG- 415 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 415 (526)
...+....+.|.|+++ +|++..+.+.+....+ +..+++.++++++.||+++|+ ... .+.++.++....
T Consensus 223 ~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~-------~l~--~~~~~~~~~~~~~ 292 (356)
T TIGR00901 223 LGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY-------ALL--LFGIVQALTNAGF 292 (356)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH-------HHH--HHHHHHHHHHHHH
Confidence 8888888999999998 8999999998887666 567899999999999999872 222 222222222221
Q ss_pred -hc--cC-------chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHh
Q 009757 416 -LT--AA-------KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGT 467 (526)
Q Consensus 416 -~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ 467 (526)
+. .. +..+......++.....+...+....+..+..| +++|+.+|+.++..+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 293 VWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 11 11 223334434444444445566666777777766 799999999888764
No 84
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=1.9e-26 Score=230.63 Aligned_cols=402 Identities=13% Similarity=0.092 Sum_probs=267.7
Q ss_pred HHHHHHHHHHhhhhhhhhcchhhhh-hh--cCCccchhhHHHHHHHHHHHHhhhhhhHHHhH-hcChHHHHHHHHHHHHH
Q 009757 102 SMLALALALCNADRVVMSVAIVPLS-LA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLA 177 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~--~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~ 177 (526)
..+.+..+...+..+...+.+|.+. ++ +|.+..+.|++.+.+.++..++++++|+++|| +|||++++++.++.+++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 3344455555555555666666654 44 89999999999999999999999999999999 89999999999999999
Q ss_pred HhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcch---hhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE---RARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
.++.+++ ++++.+++.|++.|+|.|...+...++++|++|+++ |+++++++..+.++|.++||.+++++.++.||
T Consensus 93 ~~~~~~~--~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 93 HFMLAMS--IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred HHHHHhc--ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 9999988 888899999999999999999999999999998654 88899999999999999999999999998999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcc---CCCCCCCCCChhHHHHHHHhc----------ccccccCCCCC------------
Q 009757 255 FGPFVIFGLSGFLWVLVWLSATS---STPDRHPQISKYELEYILREK----------QKPLLMGNKHK------------ 309 (526)
Q Consensus 255 ~~~f~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~------------ 309 (526)
++.|++.++..++..+..+...+ +.|++.+..++++.+...... .......+...
T Consensus 171 ~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (475)
T TIGR00924 171 HVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAV 250 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999988655554433333222 112111111111111000000 00000000000
Q ss_pred -------CCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcch----hhhHhhHhHHHHHHHHH
Q 009757 310 -------PATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFSAVPWSVMAFTGY 378 (526)
Q Consensus 310 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~~~~~~~~~i~~~ 378 (526)
..++.....+..|...+..+.+...+....+....+.++.+.++..+.+... .+++.++..+..++..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p 330 (475)
T TIGR00924 251 IIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSP 330 (475)
T ss_pred HHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHH
Confidence 0000001011112223445555566666777777777888887754443222 66788888888888877
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc---------cCchhHHHHHHHHHHHHHHhhhhhhHHHHHHh
Q 009757 379 LGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT---------AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQE 449 (526)
Q Consensus 379 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (526)
+..++..|..+|+.......+ +.+++++.++++.... ...+.++.+...++.........+.......+
T Consensus 331 ~~~~~~~~l~~~~~~~~~~~k--~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~ 408 (475)
T TIGR00924 331 VLAMIWTRLGRKGKDPTTPLK--FTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTK 408 (475)
T ss_pred HHHHHHHHHHhCCCCCCcHHH--HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 777776777765332222222 2334444333333322 12345555555555555566667777777777
Q ss_pred hcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 450 IAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 450 ~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
..| +.||+++|+......+|..+++.+.+...+..| +...|...++..++..++.+..
T Consensus 409 ~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 409 IAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHHH
Confidence 766 699999999999999999999999887777655 6666766666666555554443
No 85
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3.7e-27 Score=227.29 Aligned_cols=405 Identities=16% Similarity=0.103 Sum_probs=275.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcchhhhh--------hhcC--Cccch----hhHHHHHHHHHHHHhhhhhhHHHhHhcCh
Q 009757 99 KVVSMLALALALCNADRVVMSVAIVPLS--------LAHG--WSRSF----SGIVQSSFLWGYLVSPIAGGTLVDYYGGK 164 (526)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~--~s~~~----~g~~~s~~~~~~~~~~~~~G~l~dr~Grr 164 (526)
.......++.+-.++....+++..+.+. +.+| .++.+ .+.+.+++.+|.++|++..|.++||+|||
T Consensus 11 ~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK 90 (485)
T KOG0569|consen 11 LAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRK 90 (485)
T ss_pred HHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 3334444444555555555555544333 3455 34333 47778899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcc-ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHH
Q 009757 165 IIMAWGVALWSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLV 243 (526)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~ 243 (526)
..+.++.++..++.++..++. .+++.+++++|++.|+..|.......-++.|..|++.||....+...+..+|.+++..
T Consensus 91 ~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~ 170 (485)
T KOG0569|consen 91 NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQV 170 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHH
Confidence 999999888888877655542 2788999999999999999999999999999999999999999999999999999977
Q ss_pred HHHH--HHhhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCC--CCChhHHHHHHHhc--ccc---------cccCCCC
Q 009757 244 LSPI--LMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP--QISKYELEYILREK--QKP---------LLMGNKH 308 (526)
Q Consensus 244 l~~~--l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~---------~~~~~~~ 308 (526)
++.- +-+...|++.+.+..+++++..+. +.+.||+|+..- +.+++|.++..+.. .++ .+.++++
T Consensus 171 ~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~-l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~ 249 (485)
T KOG0569|consen 171 LGLPSLLGTEDLWPYLLAFPLIPALLQLAL-LPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEE 249 (485)
T ss_pred HccHHhcCCCcchHHHHHHHHHHHHHHHHH-HhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhc
Confidence 7632 334456999998888877766554 455688887421 22233322222211 110 0011111
Q ss_pred CCCCCCchHHHHHcCchHHHH-----HHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHH
Q 009757 309 KPATVIPPFRRLLSKMPTWSI-----IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLL 383 (526)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l 383 (526)
..+....+++++++++....- .+.......+.+.+..|...++++ .|++..++.+.....+....+.++++.++
T Consensus 250 ~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~l 328 (485)
T KOG0569|consen 250 LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFL 328 (485)
T ss_pred cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222355678889988664442 222333334556667777777777 69999999999999999999999999999
Q ss_pred HHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc----c-Cch-hHH---HHHHHHHHHHHHhhh-hhhHHHHHHhhcc-
Q 009757 384 SDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT----A-AKS-PVM---ASAWLTLAIGMKSFS-HSGFLVNLQEIAP- 452 (526)
Q Consensus 384 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~-~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~- 452 (526)
.||+||| .++..+..++.+..+.+. . ... .|. .+++.++.......+ .+..+.+.+|+.|
T Consensus 329 id~~gRR---------pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~ 399 (485)
T KOG0569|consen 329 IDRLGRR---------PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQ 399 (485)
T ss_pred HHhcCCc---------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCc
Confidence 9999999 333333333332222211 1 111 222 233333334444444 4566788888888
Q ss_pred cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHH-HHHHHHHHHHHhcCceecc
Q 009757 453 QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLL-YFLSALFYIIFSTGERVNF 516 (526)
Q Consensus 453 ~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 516 (526)
+.|+.++++...+..+..++-...+..+.+..|. ..|+...+. .+..+.++..++++|.+..
T Consensus 400 ~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 400 SARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHhCcccCCCCH
Confidence 6999999999999999999999999999999985 344444444 4444444555566665543
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=2.6e-26 Score=225.81 Aligned_cols=371 Identities=12% Similarity=0.062 Sum_probs=262.3
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHH--HHHHHHHHHHhhhhhh-HHHhHhcChHHHHHHHHHH-HH
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIV--QSSFLWGYLVSPIAGG-TLVDYYGGKIIMAWGVALW-SL 176 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~--~s~~~~~~~~~~~~~G-~l~dr~Grr~~l~~~~~~~-~~ 176 (526)
+..+...++.++...+...+.+|.+.++.|.|.+++|++ .++..+...+.+++++ +..||+||||..++...+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 556777888899988999999999999999999999997 4667888888888884 4799999999875555332 21
Q ss_pred HHhhhh-hccccc-hHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 177 ATFLTP-WAADTS-LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 177 ~~~~~~-~~~~~~-~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
.....+ +....+ ...++...++.++..+...+...++..|..++++++...+....+..+|.++|+.+.+++.+++||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 222222 211122 334445556666777888888999999999888889999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHH
Q 009757 255 FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANA 334 (526)
Q Consensus 255 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (526)
|..|++.+++.++..+..++..|+++++.+. ++....++++.+|+|.++......+
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~l~~~~~~~~~~~~~ 218 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEA------------------------PLARRASLFRFFRRPLAWSLLALAL 218 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcccc------------------------chhhHHHHHHHHcCcCHHHHHHHHH
Confidence 9999999988877666655554443211100 0011235678899999888888888
Q ss_pred HHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHH-HHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH-HHHHH
Q 009757 335 MHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI-APGIA 412 (526)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~-~~~~~ 412 (526)
+..........+.+.|++| .|+++++.+.+....++ ...++.++.|++.||+++++ ......... .....
T Consensus 219 l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~-------~l~~~~~~~~~~~~~ 290 (390)
T TIGR02718 219 LSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR-------TFILGVGLAGSLALL 290 (390)
T ss_pred HHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH-------HHHHHHHHHHHHHHH
Confidence 8888788888899999998 69999999999887764 56677899999999999882 222111111 11111
Q ss_pred HHhhc---cCchhHHHHHHHHHHHHHHhhhhhhHHHH-HHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchh
Q 009757 413 LIGLT---AAKSPVMASAWLTLAIGMKSFSHSGFLVN-LQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSF 487 (526)
Q Consensus 413 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~ 487 (526)
.+... .............+.....+...+..... .....+ +.+++.+++.+...++|..++|.+.|.+.|..| +
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~ 369 (390)
T TIGR02718 291 WFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-Y 369 (390)
T ss_pred HHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-c
Confidence 11111 11222222222223222333443444333 445555 689999999999999999999999999999987 8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009757 488 QGFLLLTSLLYFLSALF 504 (526)
Q Consensus 488 ~~~~~~~~~~~~~~~~~ 504 (526)
...|...+++.+++.+.
T Consensus 370 ~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 370 AGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888877766665443
No 87
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.96 E-value=1.1e-26 Score=220.34 Aligned_cols=380 Identities=12% Similarity=0.069 Sum_probs=262.4
Q ss_pred hhhhhhhcchhhhhhhcCCccch-hhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHH
Q 009757 113 ADRVVMSVAIVPLSLAHGWSRSF-SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLA 191 (526)
Q Consensus 113 ~~~~~~~~~~~~l~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (526)
-.+...+.+.|.+.+++|+|+.+ .|.+.++++.+++++.++.|+++||+|.|+++.++.+.+++.+++.+++ ++++.
T Consensus 40 e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa--~Sl~~ 117 (511)
T TIGR00806 40 QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG--TSVWH 117 (511)
T ss_pred HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--HHHHH
Confidence 34677888899999999999999 9999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHH--HHHHHHHH
Q 009757 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIF--GLSGFLWV 269 (526)
Q Consensus 192 l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~--~~~~~~~~ 269 (526)
+.+.|++.|++.|... +...++..|+|+++|+++.++..++..+|.+++++++++ +..+|||..+.+. ...+....
T Consensus 118 L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a 195 (511)
T TIGR00806 118 MQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFS 195 (511)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999999 5568999865443 22223333
Q ss_pred HHHHhhccCCCCCCCCCChhHHH-HHHHhcccccccCC--CC--CC-------CCCCchHHHHHcCchHHHHHHHHHHHH
Q 009757 270 LVWLSATSSTPDRHPQISKYELE-YILREKQKPLLMGN--KH--KP-------ATVIPPFRRLLSKMPTWSIIVANAMHS 337 (526)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (526)
+++-+++|..++..-...+++.+ ....+.+.....+. .. .+ ...+..++...+||.++...+-+.+..
T Consensus 196 ~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~ 275 (511)
T TIGR00806 196 VFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNS 275 (511)
T ss_pred HHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHh
Confidence 33444455433311000000000 00000000000000 00 00 011234455678888888888888888
Q ss_pred HHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc
Q 009757 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (526)
.+++.+.+|....-++..+-....-|..-++..+.+.+..+..|++-.++.+. ....+.+..++.+..++++.
T Consensus 276 ~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~ 348 (511)
T TIGR00806 276 AGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMS 348 (511)
T ss_pred hHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhh
Confidence 88899989888888775332223567777777888888888888885544332 22445555556666677777
Q ss_pred cCchhHHHHHHHHHHHHHHhhhhhhH-HHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHH----hhhcc---ccchhHH
Q 009757 418 AAKSPVMASAWLTLAIGMKSFSHSGF-LVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGA----GFFVE---LVGSFQG 489 (526)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~----g~l~~---~~g~~~~ 489 (526)
..++.|...+..++..+...+..++. ..+...+..+..|-.+|+.+++..+-..+-..+. |.-.+ .+--|..
T Consensus 349 ~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~ 428 (511)
T TIGR00806 349 QSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYSV 428 (511)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehhh
Confidence 78888888777766655555554444 3444445556779999998887766655544432 22111 1112455
Q ss_pred HHHHHHHHHHHHHH
Q 009757 490 FLLLTSLLYFLSAL 503 (526)
Q Consensus 490 ~~~~~~~~~~~~~~ 503 (526)
.|.+.+++.++..+
T Consensus 429 yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 429 YFLVLSIICFFGAG 442 (511)
T ss_pred HHHHHHHHHHHHHH
Confidence 56555555554444
No 88
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2.5e-27 Score=212.16 Aligned_cols=401 Identities=15% Similarity=0.101 Sum_probs=285.5
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHH
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
..+.+|..............+.....+.+.|.+.+.+|.+..|..++......+..+++..+|.++|++|||+.+.+..+
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 34567888888888888888877777888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc
Q 009757 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (526)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~ 252 (526)
...+...+.+.+ +|+..+.+.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.++...++..++.++
T Consensus 152 ~t~v~~~is~~s--pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 152 VTGVFGVISGAS--PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHHHHHhhcCC--CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 9999999999999999999 999999999999999988777666 899999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhH-----HHHHHHhcccc--------------------cccCCC
Q 009757 253 GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYE-----LEYILREKQKP--------------------LLMGNK 307 (526)
Q Consensus 253 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--------------------~~~~~~ 307 (526)
||||..........+.+ ...+..+|+|+-.-...+++ .+++.+...+. ....+.
T Consensus 228 gwr~~l~~~~~pl~~~a-~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~ 306 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMFAA-RFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKS 306 (528)
T ss_pred hHHHHHHHHHhHHHHHH-HHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhh
Confidence 99998888775554444 44556677776332221111 11222111111 000011
Q ss_pred CCCCCCCchHHHHHc---CchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh--c-----------------CCcchhhhH
Q 009757 308 HKPATVIPPFRRLLS---KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVY--H-----------------IDLRQASWF 365 (526)
Q Consensus 308 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g-----------------~s~~~~~~~ 365 (526)
+..++...+...++. ++..+.+...++...+.+++.........+... + .+...--.=
T Consensus 307 ~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd 386 (528)
T KOG0253|consen 307 SAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD 386 (528)
T ss_pred ccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH
Confidence 112223333444432 133344455555556666665544444444311 1 111111112
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHH
Q 009757 366 SAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLV 445 (526)
Q Consensus 366 ~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (526)
..+..+....|.++.+++.||+||| ..+...++..+++++.+...........+.+.+-.+........+.
T Consensus 387 llitslaefPGlLIt~~iverlGRK---------kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYv 457 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRK---------KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYV 457 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcch---------hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEE
Confidence 3345677888999999999999999 4556666777777766665555555555666666666677788899
Q ss_pred HHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 009757 446 NLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFST 510 (526)
Q Consensus 446 ~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (526)
+..|++| ..|+++.|.+..+..+|+++.|.+. ...+.. ...+..+.+.+++++.++..+++.
T Consensus 458 YtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s--~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 458 YTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELS--TSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred ecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccc--eeehHHHHHHHHHHHHHHheeeee
Confidence 9999999 5999999999999999999999988 444442 233444445555556555555543
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=6.3e-26 Score=226.80 Aligned_cols=398 Identities=12% Similarity=0.080 Sum_probs=248.6
Q ss_pred HHHHHHHHHHHhhhhhhh-hcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhH-hcChHHHHHHHHHHHHHH
Q 009757 101 VSMLALALALCNADRVVM-SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLAT 178 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~ 178 (526)
+..+++..+...+..+.. .....++.+++|.+..+.+++.+.+.....+..+++|+++|| +||||+++++.++++++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 444444444454444444 344556678899999999999999998999999999999999 999999999999999999
Q ss_pred hhhhhccccchHH-HHHHHHHhhhhccchhhhhHHHHhhhcCcc--hhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCch
Q 009757 179 FLTPWAADTSLLA-LLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (526)
Q Consensus 179 ~~~~~~~~~~~~~-l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~ 255 (526)
++++++ .+... ++++|+++|+|.|...+...+++.|++|++ +|+++++++..+.++|..+||.+++++.+++|||
T Consensus 96 ~~~~~~--~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~ 173 (489)
T PRK10207 96 FMTGMS--LLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYS 173 (489)
T ss_pred HHHHHh--ccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChH
Confidence 999887 55444 558899999999999999999999999876 4578999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCCCCC----CCCCChhHHHHH------------HHhcccc-cc---------------
Q 009757 256 GPFVIFGLSGFLWVLVWLSATSSTPDR----HPQISKYELEYI------------LREKQKP-LL--------------- 303 (526)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------------~~~~~~~-~~--------------- 303 (526)
+.|++.++..++. ++.+...++..++ .+....+..... ....... ..
T Consensus 174 ~~F~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 252 (489)
T PRK10207 174 VTYNLCGAGLIIA-LLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTII 252 (489)
T ss_pred HHHHHHHHHHHHH-HHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 9999976543333 3333222221111 101001100000 0000000 00
Q ss_pred -cCCCCCCCCCCchHHHHHcCchHHHHHHH--HHHHHHHHHHHHHhHHHHHHHHhcCCc----chhhhHhhHhHHHHHHH
Q 009757 304 -MGNKHKPATVIPPFRRLLSKMPTWSIIVA--NAMHSWGFFVILSWMPIYFNFVYHIDL----RQASWFSAVPWSVMAFT 376 (526)
Q Consensus 304 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~s~----~~~~~~~~~~~~~~~i~ 376 (526)
..++. +. .+.+|+|.+....+. ..+....+....+.++.+.++..+.+. .....+.+...+..++.
T Consensus 253 f~~~~~-~~------~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~ 325 (489)
T PRK10207 253 FFREAF-KL------DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVA 325 (489)
T ss_pred HHHHHh-cC------CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHH
Confidence 00000 00 134555554433322 344445555565777778775333211 12234444455666678
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHH-----hhcc---CchhHHHHHHH-HHHHHHHhhhhhhHHHHH
Q 009757 377 GYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI-----GLTA---AKSPVMASAWL-TLAIGMKSFSHSGFLVNL 447 (526)
Q Consensus 377 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 447 (526)
.++.+++.||+++|+.......+......+...+...+ .... ..+.++.+... +.+.+.....++......
T Consensus 326 ~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~ 405 (489)
T PRK10207 326 SPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIA 405 (489)
T ss_pred HHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 88889999999988644333333333222222221111 1111 12234343333 344444444444445555
Q ss_pred HhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhcc---------ccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 448 QEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVE---------LVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 448 ~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
...+++.+|.++|+.+...++|+.++..+.+.... ..+.+...|...++..+++.++++..
T Consensus 406 ~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~ 475 (489)
T PRK10207 406 ALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALM 475 (489)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555899999999999999999999988865521 11125667777776666555555443
No 90
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=2.9e-27 Score=236.72 Aligned_cols=335 Identities=16% Similarity=0.124 Sum_probs=239.7
Q ss_pred chhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhH----hcCh-HHHHHHHHHHHHHHhhhhhcccc----chHH
Q 009757 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGK-IIMAWGVALWSLATFLTPWAADT----SLLA 191 (526)
Q Consensus 121 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~~----~~~~ 191 (526)
..+.+.+++|+++.++|++.++..+..++..++.|+++|| +||| +.++++....+++.+++.+.+.. .++.
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 4566777899999999999999999999999999999998 6774 46778888888888777665211 1456
Q ss_pred HHHHHHHhhhhccchhhhhHHHHhhhc-CcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh-------hcCchhHHHHHHH
Q 009757 192 LLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMS-------QAGIFGPFVIFGL 263 (526)
Q Consensus 192 l~~~r~l~Gig~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-------~~gw~~~f~~~~~ 263 (526)
+++.+++.+++.+...+...++..|.. ++++|++..++...+..+|..+++.+.+.+.. ..+||+.+.+.++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~ 181 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLAL 181 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHH
Confidence 777888899998888888888888887 46899999999999999998888777665543 4579999999998
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHH
Q 009757 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (526)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (526)
+.++..++.++..+|++++.+ .+++++.+..+.+++++++|.++..++..++........
T Consensus 182 l~~~~~~~~~~~~~e~~~~~~--------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (437)
T TIGR00792 182 IGVVSLIICFFGTKERYSEIP--------------------KNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIK 241 (437)
T ss_pred HHHHHHHHHHcCCEecCCCCC--------------------cccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 888777666666665542111 000111123446778889999998888888877777776
Q ss_pred HHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccC-chh
Q 009757 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA-KSP 422 (526)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 422 (526)
..+.+.|.+..++ +....+.+.....++.+++.++.+++.||+++|+ ....+..+..+..+.+... ++.
T Consensus 242 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 311 (437)
T TIGR00792 242 NGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI---------LFAGGILLMVLGYLIFFFAGSNL 311 (437)
T ss_pred cchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH---------HHHHHHHHHHHHHHHHHHcchhH
Confidence 6666777766555 4556677777778889999999999999999882 2222333322222222221 233
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHhhc--------ccchhhHHHHHHHHHhHHHHHHHHHHhhhccccc
Q 009757 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIA--------PQYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g 485 (526)
+......++.....+...+.......+.. ++.+|.+.|+.+.+..+|..+++.+.|.+.+..|
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 312 PLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33333333333333334455555555543 3467999999999999999999999999998765
No 91
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=8.1e-27 Score=236.47 Aligned_cols=408 Identities=17% Similarity=0.113 Sum_probs=267.8
Q ss_pred HHHHHHHHHHHHHHhhh--hhhhhcchhhhhhhcC-----Ccc--chhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHH
Q 009757 98 VKVVSMLALALALCNAD--RVVMSVAIVPLSLAHG-----WSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA 168 (526)
Q Consensus 98 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~-----~s~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 168 (526)
........+..+..+.+ ....+++...+.++.. .+. .+.+|+.+...++..+++++.|+++|++|||+.++
T Consensus 44 ~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~ 123 (513)
T KOG0254|consen 44 ILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL 123 (513)
T ss_pred HHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 33444444555555544 4455566666655321 122 34599999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q 009757 169 WGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 248 (526)
++.+.+.++.++++++ +|+++++++|+++|+|.|......+.+++|..|++.||...+..+....+|..++..++...
T Consensus 124 ~~~~~~~iG~ii~~~a--~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~ 201 (513)
T KOG0254|consen 124 LAVVLFLIGAIIIALA--PSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT 201 (513)
T ss_pred HHHHHHHHHHHHHHHh--hhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999 99999999999999999999999999999999999999999999999999999996665555
Q ss_pred Hhh-cCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCC-ChhHHHHHHHhccc--ccccC-----------CCCCCCCC
Q 009757 249 MSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQI-SKYELEYILREKQK--PLLMG-----------NKHKPATV 313 (526)
Q Consensus 249 ~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~-----------~~~~~~~~ 313 (526)
.+. .+||..+.+..+.+++..+. .++.||+|+..-+. ..++.+........ ....+ .+......
T Consensus 202 ~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (513)
T KOG0254|consen 202 SKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEG 280 (513)
T ss_pred ccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccc
Confidence 332 48999999998888888777 77788888643221 22222222111111 00000 00000001
Q ss_pred CchHHHHHc----CchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHh
Q 009757 314 IPPFRRLLS----KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (526)
Q Consensus 314 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (526)
...++++++ ++.++...+..+.+..+......|.+.+++. .|.+... .....+.++...++.++..++.||+||
T Consensus 281 ~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gR 358 (513)
T KOG0254|consen 281 KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGR 358 (513)
T ss_pred cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 112333332 2234445555566666667777888888877 5766443 555556677788888888999999999
Q ss_pred hcCccchhHHHHHHHHHHHHHHHHHhhc-------c-----CchhHHHHHHHHHHH-HHHhhhhhhHHHHHHhhcc-cch
Q 009757 390 RGTSVTLTRKILQSIGFIAPGIALIGLT-------A-----AKSPVMASAWLTLAI-GMKSFSHSGFLVNLQEIAP-QYS 455 (526)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~ 455 (526)
| .++..+...+.++...+. . ....+..+...++.. .+.....+..+.+..|..| +.|
T Consensus 359 r---------~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r 429 (513)
T KOG0254|consen 359 R---------KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLR 429 (513)
T ss_pred H---------HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHH
Confidence 9 333333333333333221 1 112233333333333 3333334555678889999 799
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHH-HHHHHHhcCceeccccc
Q 009757 456 GVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSA-LFYIIFSTGERVNFDEA 519 (526)
Q Consensus 456 g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 519 (526)
+++.++...++.+...+-......+.+..+.....+.+.+++.+... .+++.+++.+.+..++.
T Consensus 430 ~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei 494 (513)
T KOG0254|consen 430 SKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEI 494 (513)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHH
Confidence 99999999999988888777766666654312233333344444333 34555666666555443
No 92
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=1.8e-26 Score=208.23 Aligned_cols=355 Identities=15% Similarity=0.080 Sum_probs=236.8
Q ss_pred cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhh
Q 009757 129 HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALP 208 (526)
Q Consensus 129 ~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~ 208 (526)
.+.+....|.+.+.+.++..+.++.+|.++||+|||++++++.+..++...+.+++ .|+..+++.|++.|+..|. ..
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S--~~F~afv~aR~l~Gi~kgn-l~ 139 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS--RNFAAFVLARFLGGIFKGN-LS 139 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhhhhccCc-hH
Confidence 34455677999999999999999999999999999999999999999999999999 9997777779999999887 66
Q ss_pred hhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh---hcCchhHHHH----HHHHHHHHHHHHHhhccCCCC
Q 009757 209 AMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS---QAGIFGPFVI----FGLSGFLWVLVWLSATSSTPD 281 (526)
Q Consensus 209 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~---~~gw~~~f~~----~~~~~~~~~~~~~~~~~~~~~ 281 (526)
...++++|.+++|+|+++++.+...+++|.++||.+|+++.. ..| +.+|.. ..+....-.....++.||+-+
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 789999999999999999999999999999999999999987 333 222222 112222212233344566533
Q ss_pred CCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchH-------HHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 009757 282 RHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPT-------WSIIVANAMHSWGFFVILSWMPIYFNFV 354 (526)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (526)
.+++. ++.....+.... +++..+..+..--..+||+.. ..+.+..+++...+..+..+.+.+..+.
T Consensus 219 ~rk~~--~~~~~~~~~~~~-----~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~r 291 (451)
T KOG2615|consen 219 LRKRN--DEHSTLQEAADD-----RLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGR 291 (451)
T ss_pred chhhc--ccccchhhhhhh-----hhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCc
Confidence 32222 111000000000 000000000001123344322 2233444444455555555555555566
Q ss_pred hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHH
Q 009757 355 YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIG 434 (526)
Q Consensus 355 ~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (526)
+|+++.+.|-+.+..++.+.+.........+|.... .+......+..+.-.++.+.....+........+..+
T Consensus 292 fg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf 364 (451)
T KOG2615|consen 292 FGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSF 364 (451)
T ss_pred cCCChhhheeeeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHH
Confidence 899999999999988888877777666666665422 1133344444444444445555555555555555555
Q ss_pred HHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHH
Q 009757 435 MKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLS 501 (526)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 501 (526)
......+....++....| ++||+++|+..+.+.++.++||.+.|.+..+.-.-+..+...+.+.++.
T Consensus 365 ~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 365 STASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred HHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence 556666777778887777 6999999999999999999999999999987543444554444444444
No 93
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=7.3e-28 Score=222.45 Aligned_cols=416 Identities=14% Similarity=0.175 Sum_probs=293.5
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhc-C-------CccchhhHHHHHHHHHHHHhhhhhhHHHhHhc
Q 009757 91 EFITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAH-G-------WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG 162 (526)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-------~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G 162 (526)
+...+++.+.+.+..++.+.+.++...++...|.+...+ + .++...+.+..+..+|.++|++++|++.||+|
T Consensus 33 ~g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~G 112 (538)
T KOG0252|consen 33 EGLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFG 112 (538)
T ss_pred cchhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 335667788899999999999999999999988877654 2 34566789999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHhhhhhccc-----cchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhH
Q 009757 163 GKIIMAWGVALWSLATFLTPWAAD-----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSG 237 (526)
Q Consensus 163 rr~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G 237 (526)
||+++...++++.++++++++... .-.+++...|++.|+|.|+-+|.+.++.+|...+++||...+...+..+.|
T Consensus 113 RK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~G 192 (538)
T KOG0252|consen 113 RKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFG 192 (538)
T ss_pred chhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchh
Confidence 999999999999999998877631 125678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhc---------------CchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhccccc
Q 009757 238 NAIGLVLSPILMSQA---------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPL 302 (526)
Q Consensus 238 ~~ig~~l~~~l~~~~---------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (526)
.+.|.+++-.+...+ =||..|.+.+++.++.... ....||+++-.. ...++.+....+..+..
T Consensus 193 ilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~-Rl~M~Et~~Y~a-l~~~~~~~a~~d~~k~~ 270 (538)
T KOG0252|consen 193 ILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYF-RLKMPETARYTA-LVSKKLKQAAGDMKKVL 270 (538)
T ss_pred HhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh-hhcCCcchhHHH-HhhcCHhhhhhcccccc
Confidence 888888776654311 2998888877776554433 334455543220 00000000001111100
Q ss_pred c-----cCC-C---CCCCCCCchHHHHHcC---chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhh------
Q 009757 303 L-----MGN-K---HKPATVIPPFRRLLSK---MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW------ 364 (526)
Q Consensus 303 ~-----~~~-~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------ 364 (526)
. .+. + +.++.....+...+.. ++++..+..+|+.-.+++....+...++++ .|+.+.....
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~v 349 (538)
T KOG0252|consen 271 SVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKV 349 (538)
T ss_pred ccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHH
Confidence 0 000 0 0111111112222222 456667788888888999988888888887 5765554433
Q ss_pred --HhhHhHHH-HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCch----hHHHHHHHHHHHHHHh
Q 009757 365 --FSAVPWSV-MAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS----PVMASAWLTLAIGMKS 437 (526)
Q Consensus 365 --~~~~~~~~-~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 437 (526)
...+...+ .+.|..+...++|++||+ .....++.++.+..+.+....+ .....++..+..++..
T Consensus 350 A~~~~iia~~~~vPGyw~tv~~id~iGRk---------~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~N 420 (538)
T KOG0252|consen 350 AEGNLIIAVCSTVPGYWFTVYFIDIIGRK---------YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGN 420 (538)
T ss_pred HHHHHHHHHHccCCceeEEEEEeehhhhH---------HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHh
Confidence 11122222 233556677789999999 6667777777777766654433 1222333333344444
Q ss_pred hhhh-hHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcc-----ccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 009757 438 FSHS-GFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE-----LVGSFQGFLLLTSLLYFLSALFYIIFST 510 (526)
Q Consensus 438 ~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (526)
+++. ....+..|.+| +.|++..|+....+..|++++...+.++.+ ..| ....+++.+.+.+++.+..+++++
T Consensus 421 FGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pE 499 (538)
T KOG0252|consen 421 FGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIPE 499 (538)
T ss_pred cCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcccc-chHHHHHHHHHHHHhHheeEEeec
Confidence 4443 44677789999 799999999999999999999999999999 666 889999999999999998888887
Q ss_pred Cceeccccc
Q 009757 511 GERVNFDEA 519 (526)
Q Consensus 511 ~~~~~~~~~ 519 (526)
.+++..++.
T Consensus 500 tk~~~leei 508 (538)
T KOG0252|consen 500 TKGKSLEEI 508 (538)
T ss_pred ccccCHHHh
Confidence 766655444
No 94
>PTZ00207 hypothetical protein; Provisional
Probab=99.95 E-value=1.3e-24 Score=216.85 Aligned_cols=410 Identities=12% Similarity=0.026 Sum_probs=283.1
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHH
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
...+||..+.......... ...+.++...+.+.+++|+|..+++++.++. .....++++.|++.||+|+|+++.++.+
T Consensus 22 ~e~~Rw~~lva~~~~~~~~-g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~l 99 (591)
T PTZ00207 22 NEPRRFALLVLGAFCSICT-SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMT 99 (591)
T ss_pred cccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 3455666665555444443 3445677888999999999999999998874 3455678889999999999999999999
Q ss_pred HHHHHHhhhhhccc----cchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q 009757 173 LWSLATFLTPWAAD----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 173 ~~~~~~~~~~~~~~----~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 248 (526)
+++++.++++++.+ ++++.+++.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++.+.+...+
T Consensus 100 l~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 100 VFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888622 489999999999999999999999999999996 8899999999999999998655554444
Q ss_pred HhhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCC-----CCChhHHHHHH--Hh----ccc-c---------------
Q 009757 249 MSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-----QISKYELEYIL--RE----KQK-P--------------- 301 (526)
Q Consensus 249 ~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~----~~~-~--------------- 301 (526)
.. .+|+..|++.+++.++..++.+.+.+++|.... +.+++|+.... .. ++. .
T Consensus 179 ~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~ 257 (591)
T PTZ00207 179 FS-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIV 257 (591)
T ss_pred HH-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHH
Confidence 33 468899999999888887777777666553221 11222222000 00 000 0
Q ss_pred --------------------------------cc--------------c-C----C------------CC--------C-
Q 009757 302 --------------------------------LL--------------M-G----N------------KH--------K- 309 (526)
Q Consensus 302 --------------------------------~~--------------~-~----~------------~~--------~- 309 (526)
.+ . + + ++ +
T Consensus 258 yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (591)
T PTZ00207 258 FLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDY 337 (591)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccC
Confidence 00 0 0 0 00 0
Q ss_pred C-CCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcch--hhhHhhHhHHHHHHHHHHHHHHHHH
Q 009757 310 P-ATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ--ASWFSAVPWSVMAFTGYLGGLLSDM 386 (526)
Q Consensus 310 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~--~~~~~~~~~~~~~i~~~~~g~l~dr 386 (526)
. .....++.+.+++.++|.+.+..++.......+...+.++.+..-|.+... ...+.+..++++.+|++..|.+...
T Consensus 338 ~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~ 417 (591)
T PTZ00207 338 IAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIW 417 (591)
T ss_pred CCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHH
Confidence 0 111127788889999999999999998888888888888888832763322 3337888999999999999999844
Q ss_pred HHhhcCccchhHHHHHHHHHHHHHHHHHhhcc-CchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHH
Q 009757 387 LIQRGTSVTLTRKILQSIGFIAPGIALIGLTA-AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTA 465 (526)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 465 (526)
..+|+...+..|...+.+..+ +.+..+++.. .+...+.+ ..++.+...+...+......+|++.++.|+-+.+....
T Consensus 418 ~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~-~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a 495 (591)
T PTZ00207 418 SQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPL-PYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLG 495 (591)
T ss_pred HHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHH-HHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHH
Confidence 444432112233344444444 3332222222 22223333 33344444566677788888888889999988888888
Q ss_pred HhHHHHHH-HHHHhhhccccc----h--------hHHHHHHHHHHHHHHHHHHHHH
Q 009757 466 GTFAAILG-TVGAGFFVELVG----S--------FQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 466 ~~lg~~~~-~~~~g~l~~~~g----~--------~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
.-+|..+. ..+.|.++|+-. + +...|++.+++++++.++...+
T Consensus 496 ~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 496 SVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 88888776 668888887432 1 5678888888888777765543
No 95
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=1.5e-24 Score=214.66 Aligned_cols=366 Identities=16% Similarity=0.097 Sum_probs=246.4
Q ss_pred HHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhh
Q 009757 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP 182 (526)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 182 (526)
.+++.....++.....+..++.+..|+|-+ ....|+.+.+.++..+..++.|+++|.+|||..++.+.++..+|.++++
T Consensus 48 ~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~a 126 (599)
T PF06609_consen 48 AFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCA 126 (599)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhh
Confidence 344444445556666677789999999864 6779999999999999999999999999999999999999999999999
Q ss_pred hccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHH
Q 009757 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFG 262 (526)
Q Consensus 183 ~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~ 262 (526)
.+ +|...++.+..+.|+|.|... .....++|..|.|.|....++.....-+...+++.++..+..+.+|||.|++.+
T Consensus 127 tA--~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~ 203 (599)
T PF06609_consen 127 TA--QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFI 203 (599)
T ss_pred cC--CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHH
Confidence 99 999999999999999977755 456669999999999988887776666666678888877777779999999998
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCh-hHHHHHHHh----------------------cccccc----------------
Q 009757 263 LSGFLWVLVWLSATSSTPDRHPQISK-YELEYILRE----------------------KQKPLL---------------- 303 (526)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----------------------~~~~~~---------------- 303 (526)
+...+.+++.+++...++++..+.++ ..++...+- .....+
T Consensus 204 i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~ 283 (599)
T PF06609_consen 204 IWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVL 283 (599)
T ss_pred HHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHH
Confidence 87776655544433222221111111 111111100 000000
Q ss_pred ------cCCCCCCCCCCchHHHHHcCc-hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcc---hhhhHhhHhHHHH
Q 009757 304 ------MGNKHKPATVIPPFRRLLSKM-PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLR---QASWFSAVPWSVM 373 (526)
Q Consensus 304 ------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~ 373 (526)
.+.....+.+..+. +++|++ .+...+++.++....++....+.|......++-+.. ..++.....+++.
T Consensus 284 Lv~F~~wE~~~~~~~Pl~P~-~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~ 362 (599)
T PF06609_consen 284 LVAFVVWEWFGAPKDPLFPH-RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGS 362 (599)
T ss_pred HHHHHHhhhhccCCCCcCCH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHH
Confidence 01111112233333 677874 455556677777777888888999888887776653 5678888888888
Q ss_pred HHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHH--HHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhh-
Q 009757 374 AFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI--ALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEI- 450 (526)
Q Consensus 374 ~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 450 (526)
.+|.++.|.+..++++-| ..+.++.+.+.+ +.+.....++....+...++.....+..........+..
T Consensus 363 ~~g~~i~g~l~~~ir~~K--------w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~ 434 (599)
T PF06609_consen 363 CAGAVILGLLFSKIRHIK--------WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIV 434 (599)
T ss_pred HHHHHHHHHHHHHccchh--------HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeee
Confidence 999999999998876552 233333333322 233222223332233333333322222222333333334
Q ss_pred cccchhhHHHHHHHHHhHHHHHHHHHHhhhc
Q 009757 451 APQYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (526)
Q Consensus 451 ~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~ 481 (526)
++++-|++.|+..++..+|+.+|..+...+.
T Consensus 435 p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 435 PDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred CchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4479999999999999999999988876654
No 96
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=6.4e-27 Score=202.01 Aligned_cols=394 Identities=15% Similarity=0.184 Sum_probs=272.6
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhH-hcChHHHHHHHHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVAL 173 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~ 173 (526)
.+|...+..+|+..|-+++.....+....++..+.+++.++..++.+.|.....+..+++|++.|| +|.|..-++-+..
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~f 119 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIF 119 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHH
Confidence 456677778888888888888888888899999999999999999999999999999999999996 5888777776677
Q ss_pred HHHHHhhhhhcc-ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc
Q 009757 174 WSLATFLTPWAA-DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA 252 (526)
Q Consensus 174 ~~~~~~~~~~~~-~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~ 252 (526)
..++.++++... .+.+|.+..+|++.|+|.-...++-++++.-|+..|+.+.++|+......+|..+--.+.+++.+..
T Consensus 120 v~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 120 VFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred HHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 777777655431 2789999999999999988888999999999999999999999999999999998888888887654
Q ss_pred Cc------hhH---HHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcC
Q 009757 253 GI------FGP---FVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSK 323 (526)
Q Consensus 253 gw------~~~---f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (526)
+- +.. .+..+...+...+......--. ++..+.+....+ ....+.++..+.+. ..
T Consensus 200 ~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~--------D~rAerilh~e~------g~~Ge~pkLtdv~~--f~ 263 (459)
T KOG4686|consen 200 GRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLS--------DDRAERILHLEE------GFLGEEPKLTDVNT--FY 263 (459)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh--------hhHHHHHHhhhc------CcccCCcccccccc--cC
Confidence 31 111 1111222221111111110000 001111111000 00001111111111 15
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHH
Q 009757 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (526)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (526)
|.+|.+.++.++++.+.+-+....|.++++.+|+|+..++.+.+.....+.+..++.|.++||+|++-+ ++..
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~-------wv~~ 336 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW-------WVAS 336 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh-------hHHH
Confidence 789999999999999999999999999999999999999999999999999999999999999999821 1111
Q ss_pred -HHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhc
Q 009757 404 -IGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (526)
Q Consensus 404 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~ 481 (526)
....+.+-..+.+... +++.. ..+++.... ......+..+..+.| ++.|+++|.++.+.++|-++.|.+.|.+.
T Consensus 337 a~~~tl~~H~~l~Ft~l-sPy~~--m~~lGLsys-llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~ 412 (459)
T KOG4686|consen 337 ACILTLLGHSGLFFTFL-SPYTS--MTFLGLSYS-LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIA 412 (459)
T ss_pred HHHHHHHHhhhHHhhhc-cHHHH--HHHHhhhHH-HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheee
Confidence 1111111122222222 22221 222333332 222334555566666 58999999999999999999999999999
Q ss_pred cccchhH---HHHHHHHHHHHHHHHHHHHHhcCceec
Q 009757 482 ELVGSFQ---GFLLLTSLLYFLSALFYIIFSTGERVN 515 (526)
Q Consensus 482 ~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (526)
|.-|+|. ..|+..+.+++....+.+.+.++++.+
T Consensus 413 d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~gn 449 (459)
T KOG4686|consen 413 DGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQSGN 449 (459)
T ss_pred cCCCchhhHHHHHHHHHHHHHHHHHHHhheeccccCC
Confidence 9887553 445555556666665555554444433
No 97
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=1.4e-23 Score=203.15 Aligned_cols=370 Identities=14% Similarity=0.142 Sum_probs=264.2
Q ss_pred HHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhc-ChHHHHHHHHHHHHHHhhhhh
Q 009757 105 ALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-GKIIMAWGVALWSLATFLTPW 183 (526)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-rr~~l~~~~~~~~~~~~~~~~ 183 (526)
+..+++.++..+.+.|.++.+.++.|.|..|+|.+.++..+...+.++++|.++||++ +||.+.+..++.++.......
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666778888899999999999999999999999999999999999999986 577787777777777666666
Q ss_pred ccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHH-HHHHHhhcC---chhHHH
Q 009757 184 AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL-SPILMSQAG---IFGPFV 259 (526)
Q Consensus 184 ~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l-~~~l~~~~g---w~~~f~ 259 (526)
. ++++.+++..++..+......|...++..+... +++.-.|-.....++|.+++... +..+....+ ....++
T Consensus 88 ~--~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 88 S--SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred h--ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 6 889998888888888888889999999888874 45566777777788888777554 233333333 234556
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHH
Q 009757 260 IFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWG 339 (526)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (526)
+.+...++.....+ ..|+.|.+++ .++..++....+..+++|+|+++...+..++....
T Consensus 164 i~~~~~~ll~~~~l-~lp~~~~~~~--------------------~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~ 222 (400)
T PF03825_consen 164 IAAILSLLLAGFAL-FLPKTPPKRS--------------------AKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGIS 222 (400)
T ss_pred HHHHHHHHHHHHHH-hCCCCccccc--------------------cCCCcccccchHHHHHhcCccHHHHHHHHHHHHHH
Confidence 65555544443333 3455542211 11111122223445799999999999999998889
Q ss_pred HHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccC
Q 009757 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (526)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (526)
......+.+.|+++.-|.+....+.+.++..++.++.-...+++.+|++.+ .++.++.+..++=..++...
T Consensus 223 ~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~---------~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 223 HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK---------WLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHh
Confidence 999999999999994337778888888888888888888999999999887 55666666666666555554
Q ss_pred -chhHHHHHHHHH----HHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHH-hHHHHHHHHHHhhhccccch-----h
Q 009757 420 -KSPVMASAWLTL----AIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAG-TFAAILGTVGAGFFVELVGS-----F 487 (526)
Q Consensus 420 -~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~-~lg~~~~~~~~g~l~~~~g~-----~ 487 (526)
++.+.......+ -+...+........++++..| +.|++++|+++... .+|..+|..++|++.|+.|. +
T Consensus 294 ~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~ 373 (400)
T PF03825_consen 294 SDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDW 373 (400)
T ss_pred cCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhH
Confidence 333333322222 333344555666667777666 69999999998865 69999999999999998872 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 009757 488 QGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~ 508 (526)
...+.+.+++.++..+++.++
T Consensus 374 ~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 374 SAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 344555555555555444444
No 98
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=2.1e-24 Score=220.31 Aligned_cols=368 Identities=16% Similarity=0.088 Sum_probs=246.9
Q ss_pred hhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccc
Q 009757 126 SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (526)
Q Consensus 126 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~ 205 (526)
.+.+..+.....+..+++.+|..+|++++|.++||+|||++++++.++..++.++.+++ +|++.+++.|++.|++.++
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a--~~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA--PNYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhccc
Confidence 35567788889999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 009757 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ 285 (526)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (526)
.......++.|++++++|+.+..+ ......+..++++.++++.. +||+.+++..++.++.+++ +++.+|+|+....
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHH
Confidence 999999999999999999999999 77788888888888888877 8999999999988877666 5566677764322
Q ss_pred CCh-hHHHHHHHhcc-------cc-----cc---cCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHH
Q 009757 286 ISK-YELEYILREKQ-------KP-----LL---MGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPI 349 (526)
Q Consensus 286 ~~~-~~~~~~~~~~~-------~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (526)
..+ ++..+..++.. .. .. ...+....++...+.++++.|++....+...+..+.......-++.
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~ 343 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL 343 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh
Confidence 221 22222222110 00 00 0000111122234667788876554444444433222222222222
Q ss_pred HHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCc--hh-HHHH
Q 009757 350 YFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK--SP-VMAS 426 (526)
Q Consensus 350 ~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~ 426 (526)
.... +|.+ ........+.....+....+...|+.||| .....+.....++++...... .. +...
T Consensus 344 ~~~~-lg~~---~~~~~~~~~~~~~p~~~~~~~~~~~~gR~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (521)
T KOG0255|consen 344 NVSG-LGGN---IYLNFTLSGLVELPAYFRNGLLLPEFGRR---------PPLFLSLFLAGIGLLLFGWLPDDLGGWLHW 410 (521)
T ss_pred hhhh-cCch---HHHHHHHHHHHHhhHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHhhccchhHHHH
Confidence 2222 3433 23333344446666777778999999888 444444444444444433332 22 2344
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHH-HHHHH
Q 009757 427 AWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYF-LSALF 504 (526)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~-~~~~~ 504 (526)
....++.+...........+..|..| ..|+.+.+.......++.+++|.+.-...... ....+...+.+.. .+.+.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~ 488 (521)
T KOG0255|consen 411 ILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMF--PLLGLILFGWLALLLGLLS 488 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccchHHHHHHHHHHHHHHH
Confidence 45555566666666666888899999 49999999999999999999998875544422 1222222333333 33344
Q ss_pred HHHHhcCcee
Q 009757 505 YIIFSTGERV 514 (526)
Q Consensus 505 ~~~~~~~~~~ 514 (526)
..++++.+..
T Consensus 489 ~~~lpet~~~ 498 (521)
T KOG0255|consen 489 LLLLPETKGK 498 (521)
T ss_pred HhcCcccCCC
Confidence 3555555443
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=4.3e-23 Score=207.67 Aligned_cols=396 Identities=14% Similarity=0.093 Sum_probs=230.4
Q ss_pred HHHHHHHHhhhhhhhhcc-hhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhH-hcChHHHHHHHHHHHHHHhhh
Q 009757 104 LALALALCNADRVVMSVA-IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLATFLT 181 (526)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~-~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~ 181 (526)
+++..+...+..+.+... ..++.+++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.+++
T Consensus 26 ~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~ 105 (500)
T PRK09584 26 IFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALV 105 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444 445568899999999999888877777777899999999 599999999999999999888
Q ss_pred hhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcch--hhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHH
Q 009757 182 PWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE--RARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (526)
Q Consensus 182 ~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~ 259 (526)
+++. ++.+.++++|+++|+|.|...+...+++.|++|+++ |+.+++++..+.++|..+||.+++++.+++|||+.|+
T Consensus 106 ~~~~-~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~ 184 (500)
T PRK09584 106 AWSG-HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFA 184 (500)
T ss_pred HHhc-ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHH
Confidence 8761 345677788999999999989999999999998543 4568899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH---HhhccCCCCCCC--CCChhHHHHHH-----HhcccccccCCCCCCCC---------------CC
Q 009757 260 IFGLSGFLWVLVW---LSATSSTPDRHP--QISKYELEYIL-----REKQKPLLMGNKHKPAT---------------VI 314 (526)
Q Consensus 260 ~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---------------~~ 314 (526)
+.++..++..+.. ....++.+++.. +.+........ -...........+.... ..
T Consensus 185 i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (500)
T PRK09584 185 LSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEA 264 (500)
T ss_pred HHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 9876544433322 222233211111 01111000000 00000000000000000 00
Q ss_pred chHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHH--hcCCc------chhhhHhhHhHHHHHHHHHHHHHHHHH
Q 009757 315 PPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFV--YHIDL------RQASWFSAVPWSVMAFTGYLGGLLSDM 386 (526)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~------~~~~~~~~~~~~~~~i~~~~~g~l~dr 386 (526)
...++.-+ ++.+.. +..++....++......+.++... ...+. ...+++.++..+..++..++..++.+|
T Consensus 265 ~~~~~~~~-~~~~~~-~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~ 342 (500)
T PRK09584 265 FAMKGAAR-RKMIVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNK 342 (500)
T ss_pred hhcCHHHH-HHHHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 00001111 222222 222233444555555555554431 11221 125566666776777777777777777
Q ss_pred HHhhcCccchhHHHHHHHHHHHHHHHHHhhccCch---------hHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchh
Q 009757 387 LIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS---------PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSG 456 (526)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g 456 (526)
.++|.. .. ..+.+++++.+++++.+..... .++.+...++.........+....+..+..| +.||
T Consensus 343 l~~r~~---~~--~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg 417 (500)
T PRK09584 343 MGDRLP---MP--HKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMG 417 (500)
T ss_pred hCcCCC---cH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHH
Confidence 665521 12 2334444444444443322111 2333333334344444555555555666655 7999
Q ss_pred hHHHHHHHHHhHHHHHHHHHHhhhcc---------ccchhHHHHHHHHHHHHHHHHHHHH
Q 009757 457 VLHGISNTAGTFAAILGTVGAGFFVE---------LVGSFQGFLLLTSLLYFLSALFYII 507 (526)
Q Consensus 457 ~~~g~~~~~~~lg~~~~~~~~g~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (526)
+++|+......+|..++..+.+.... ..+.+...|...++..++..++++.
T Consensus 418 ~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 418 FIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99998877777777776666643221 1123667777777665544443333
No 100
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.93 E-value=3.1e-23 Score=196.38 Aligned_cols=377 Identities=16% Similarity=0.108 Sum_probs=254.8
Q ss_pred HHHHHHHhhhhhhhhcchhhhhhh-cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHH--HHHH-hh
Q 009757 105 ALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW--SLAT-FL 180 (526)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~--~~~~-~~ 180 (526)
.+.++..++..+...+..+...++ .|+|.+++|.+.++..+...+.+++.|.++||+|.||-++....+. ..+. +.
T Consensus 13 s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~ 92 (412)
T PF01306_consen 13 SLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFI 92 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 344444455566777777777765 8999999999999999999999999999999999766554433222 2222 22
Q ss_pred hhhcc--ccchH-HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhH
Q 009757 181 TPWAA--DTSLL-ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGP 257 (526)
Q Consensus 181 ~~~~~--~~~~~-~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~ 257 (526)
..+.+ ..|++ ..+++-+..|+......|+..+++.++. ++.+.-.|-....+++|.+++..++|.+.+ .+-+..
T Consensus 93 ~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~ 169 (412)
T PF01306_consen 93 YVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNII 169 (412)
T ss_dssp HTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHH
Confidence 22220 12322 3344444556666666777788777775 566777888899999999999999999987 355678
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHH
Q 009757 258 FVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (526)
Q Consensus 258 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (526)
||+..+..++..++.++..|+.+++....+. ...++++...++..+++|+|++|.+.+......
T Consensus 170 fwi~s~~~~il~lll~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~ 233 (412)
T PF01306_consen 170 FWIASAAAIILLLLLLLLKPDVPPQAEVADA----------------LGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVA 233 (412)
T ss_dssp HHHHHHHHHHHHHHHHSS---SSSSS-SSTT----------------SSS------HHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcCchhhhhhcc----------------cccCCCCCcHHHHHHHhcchhHHHHHHHHHHHH
Confidence 8877766666665555555554433221110 111122223455678999999999988888877
Q ss_pred HHHHHHHHhHHHHHHHHh---cCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHH
Q 009757 338 WGFFVILSWMPIYFNFVY---HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (526)
..+..+....+.|.+..+ +.+....|.+.+...+..++...+.+++.+|+|.| ..+.++..+..+=..
T Consensus 234 ~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k---------~~Lllag~i~~iRi~ 304 (412)
T PF01306_consen 234 AIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK---------NLLLLAGVIMAIRII 304 (412)
T ss_dssp HHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH---------hHHHHHHHHHHHHHH
Confidence 788888777888887632 34445688888888889999999999999999998 345555666777777
Q ss_pred hhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHH-HHHHhHHHHHHHHHHhhhccccchhHHHHH
Q 009757 415 GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGIS-NTAGTFAAILGTVGAGFFVELVGSFQGFLL 492 (526)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~-~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~ 492 (526)
.....++++.....-.+-..-.........-+..+..| +..++.+.+. +...+++..+.+.+.|.+.|+.| ++..|+
T Consensus 305 ~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tyl 383 (412)
T PF01306_consen 305 GSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYL 383 (412)
T ss_dssp HHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHH
Confidence 77777888877766666555555556666666666666 6778888885 57778999999999999999998 887887
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 009757 493 LTSLLYFLSALFYIIFST 510 (526)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~ 510 (526)
+.+.+.+...++..+..+
T Consensus 384 img~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 384 IMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHheeeec
Confidence 777776665555555433
No 101
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.92 E-value=4.1e-22 Score=195.09 Aligned_cols=379 Identities=16% Similarity=0.109 Sum_probs=247.8
Q ss_pred HHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHh----HhcChHHHHHH-HHHHHHHHhhhh
Q 009757 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGGKIIMAWG-VALWSLATFLTP 182 (526)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~l~~~-~~~~~~~~~~~~ 182 (526)
.+...+......+.++.+.+++|.+..+.+++..+..+...+.+++.|+++| |+||||.++++ .....++.++++
T Consensus 13 ~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~ 92 (477)
T TIGR01301 13 AAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIG 92 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 3333445556666677788999999999999999999999999999999999 59999988774 666666667777
Q ss_pred hccccchH-----------------HHHHHHHHhhhhccchhhhhHHHHhhhcCcchh--hHHHHHHHhhhhhHHHHHHH
Q 009757 183 WAADTSLL-----------------ALLAMRAVVGLAEGVALPAMNNMVARWFPQTER--ARAVAIAMGGFTSGNAIGLV 243 (526)
Q Consensus 183 ~~~~~~~~-----------------~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~ig~~ 243 (526)
++ ++++ .++++-.+..++.....+...++++|.+|+++| +.++++.+...++|.++|+.
T Consensus 93 ~~--~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~ 170 (477)
T TIGR01301 93 FA--ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYA 170 (477)
T ss_pred hC--chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 4432 233333445557777888899999999998765 58999999999999999999
Q ss_pred HHHHH--Hhhc-------------CchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCC
Q 009757 244 LSPIL--MSQA-------------GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKH 308 (526)
Q Consensus 244 l~~~l--~~~~-------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (526)
+++.. .+.+ +.|..|++.+++.++..++..+..+|.|...++..+++ + .++.
T Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~-~------------~~~~ 237 (477)
T TIGR01301 171 AGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS-E------------AAPP 237 (477)
T ss_pred HHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh-h------------cccc
Confidence 99875 2221 56889999888888887777777777654221111000 0 0000
Q ss_pred CCCCCCchHHHHHc-----CchHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HhcCCcch----------hhhHhhHhHHH
Q 009757 309 KPATVIPPFRRLLS-----KMPTWSIIVANAMHSWGFFVILSWMPIYFNF-VYHIDLRQ----------ASWFSAVPWSV 372 (526)
Q Consensus 309 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~----------~~~~~~~~~~~ 372 (526)
++......++++++ .|.++.+++..++..++.+.+..|.+.|+.+ .++-++.. ..+......+.
T Consensus 238 ~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~ 317 (477)
T TIGR01301 238 SKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVV 317 (477)
T ss_pred cccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 01111122333333 2568889999999999999999999988874 45543221 12333444455
Q ss_pred HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCc------------------h---hHHHHH-HHH
Q 009757 373 MAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK------------------S---PVMASA-WLT 430 (526)
Q Consensus 373 ~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~---~~~~~~-~~~ 430 (526)
..+.+++..++.+|+|+|+ ....++.++.++++....+.. + .+..+. ...
T Consensus 318 ~~i~s~~l~~l~~~~g~~k--------~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (477)
T TIGR01301 318 LGITSIGMEKLCRGWGAGK--------RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAI 389 (477)
T ss_pred HHHHHHHHHHHHHHhccch--------hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHH
Confidence 5566677788888887431 222333222222222211100 0 122222 233
Q ss_pred HHHHHHhhhhhhHHHHHHhhcc---cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc-hhHHHHHHHHHHHHHHHHHHH
Q 009757 431 LAIGMKSFSHSGFLVNLQEIAP---QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG-SFQGFLLLTSLLYFLSALFYI 506 (526)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 506 (526)
+|...... ....++++.+..+ +..|..+|+.|.+..+.+.+.....|.+.+..| +...++.+.++.++++.++.+
T Consensus 390 ~Gi~~A~~-~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 390 LGIPLAIT-YSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred hhHHHHHH-HHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 33333333 3444455554444 466999999999999999999999888777666 355677777777777777766
Q ss_pred HHhc
Q 009757 507 IFST 510 (526)
Q Consensus 507 ~~~~ 510 (526)
+..+
T Consensus 469 ~~~~ 472 (477)
T TIGR01301 469 ILLP 472 (477)
T ss_pred HhCC
Confidence 5533
No 102
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.92 E-value=1.6e-21 Score=192.37 Aligned_cols=357 Identities=18% Similarity=0.120 Sum_probs=260.9
Q ss_pred chhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHH-HHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHH
Q 009757 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA-WGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNN 212 (526)
Q Consensus 134 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~ 212 (526)
+..++..++..+..++..|+.|.++|+-|+||.++ +...+..+++.++.+....+++...+.-++.-++.+......++
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578888999999999999999999998776554 45555555666666654355655666666777788888899999
Q ss_pred HHhhhcCcchh--------------------------hHHHHHHHhhhhhHHHHHHHHHHHHHhh--------cCchhHH
Q 009757 213 MVARWFPQTER--------------------------ARAVAIAMGGFTSGNAIGLVLSPILMSQ--------AGIFGPF 258 (526)
Q Consensus 213 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~ig~~l~~~l~~~--------~gw~~~f 258 (526)
++.|..+++++ ++..+.-.....+|.++.-.+.-.+... .+.|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999998888 8999999999999998888777665432 2358888
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCC-ChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHH
Q 009757 259 VIFGLSGFLWVLVWLSATSSTPDRHPQI-SKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (526)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (526)
.+.++..++..+..++..|+.|..++.. ...-.... -++..+.+|++.|.|.+...++.++++.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g---------------~~~l~~t~k~~~~~~~~~~fLia~~l~~ 294 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFG---------------FKRLWRTFKEIRKLRQLFLFLIAYFLYS 294 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHH---------------HHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 8888888888888888888876532211 11100000 0112235667778899999999999999
Q ss_pred HHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc
Q 009757 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (526)
-+...+......|.++.+|++..+...+.....+.+++|.++.|++.||+|.|.. +.+.........+.+..+.
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~------~~l~~~l~~~~~i~~~g~~ 368 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK------RTLLISLILWIIIPLYGLF 368 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998821 1111111111122222211
Q ss_pred -------cCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHH
Q 009757 418 -------AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQG 489 (526)
Q Consensus 418 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~ 489 (526)
...+.+.+.+..++.+.+.+...+..-++..++.| ++.+..+|++...+...+.+||.+.|.+.+.+|+.+.
T Consensus 369 G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~ 448 (477)
T PF11700_consen 369 GFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRY 448 (477)
T ss_pred HhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 12334444444434333444444555555555555 6889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q 009757 490 FLLLTSLLYFLSALFYIIFSTG 511 (526)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~ 511 (526)
.+....++.+++.+++..+..+
T Consensus 449 g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 449 GFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHHHHHHHHHHHHHHHhhccch
Confidence 9999988888888887666443
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.92 E-value=2.4e-22 Score=200.91 Aligned_cols=334 Identities=15% Similarity=0.084 Sum_probs=222.5
Q ss_pred chhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhH----hcCh-HHHHHHHHHHHHHHhhhhhcc----ccchHH
Q 009757 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGK-IIMAWGVALWSLATFLTPWAA----DTSLLA 191 (526)
Q Consensus 121 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~----~~~~~~ 191 (526)
....+.+++|++..++|.+.++..+..++..|+.|+++|| +||| +.++++.+..+++.++....+ ...++.
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~ 111 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIY 111 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 4566778899999999999999999999999999999999 6774 566677777777766554441 122455
Q ss_pred HHHHHHHhhhhccchhhhhHHHHhhhc-CcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh-------hcCchhHHHHHHH
Q 009757 192 LLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMS-------QAGIFGPFVIFGL 263 (526)
Q Consensus 192 l~~~r~l~Gig~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-------~~gw~~~f~~~~~ 263 (526)
+++..++.+++.........++.+|+. ++++|++..++...+..+|..+++.+...+.. ..+|+..+.+.++
T Consensus 112 ~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~i 191 (444)
T PRK09669 112 ACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGL 191 (444)
T ss_pred HHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 666677777777777777889999998 56889999999988888888888776554443 2468888888887
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHH
Q 009757 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (526)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (526)
+.++..+..++..+|.+++.+ +++.+..++++.++|||.++.+++..++........
T Consensus 192 i~~v~~~~~~~~~~e~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~ 248 (444)
T PRK09669 192 LGVVLFFCCFFMTKERYTPEV-----------------------DNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTR 248 (444)
T ss_pred HHHHHHHHHhCCeEEecCCCC-----------------------cCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 777666655555444322110 011223456778899999988877777666666555
Q ss_pred HHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhH
Q 009757 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPV 423 (526)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (526)
....+.|.+...+ +....+.+.....+..+++.++.+++.||+++|+ ...............+.+...++.+
T Consensus 249 ~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (444)
T PRK09669 249 GGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR-------AFKWTIVAFVILSALIFFIPPSNVW 320 (444)
T ss_pred hhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-------HHHHHHHHHHHHHHHHHHhCcchHH
Confidence 5544444444333 2333444555556777888899999999999882 2222211111111111122223444
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHhhcc--------cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc
Q 009757 424 MASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g 485 (526)
...+..++.....+...+....+..|..+ +..|..+|..+.+..+|..+++.+.|.+.+..|
T Consensus 321 ~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 321 LIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33333333333344445666666666643 235778899999999999999999999998776
No 104
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.92 E-value=7.4e-23 Score=189.87 Aligned_cols=368 Identities=15% Similarity=0.150 Sum_probs=277.9
Q ss_pred cccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHH
Q 009757 92 FITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (526)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 171 (526)
+..++||.+++++++..+.+.+.+..+++...+....|| +....-|+.-+|.+.+....+++-|+.|++|-|...+++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 356788999999999999999999999999888888899 7778889999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccc----cchH--HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHH
Q 009757 172 ALWSLATFLTPWAAD----TSLL--ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLS 245 (526)
Q Consensus 172 ~~~~~~~~~~~~~~~----~~~~--~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~ 245 (526)
.+..+|..+-..+.. +.++ ....+..+.+.+.-........+..-||++++|..+..+-..+..+|.++|.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 999999998666532 3455 7778899999998888888888999999999999999999999999999999999
Q ss_pred HHHHhhc------Cchh--HHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchH
Q 009757 246 PILMSQA------GIFG--PFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPF 317 (526)
Q Consensus 246 ~~l~~~~------gw~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (526)
..+..+- .|.. .|+..+++..+.+++..+..+++|+.++...... ..+.+..+++
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~-----------------~~~~~f~~si 259 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAA-----------------LQDASFPKSI 259 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhh-----------------hhcCcHHHHH
Confidence 8887643 3544 4555555555555666666666555443221111 1123456788
Q ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchh
Q 009757 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLT 397 (526)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~ 397 (526)
++.++|+++..+.+++.+....+++..+.+..-+.. .|++...+|.......+++++++++.|.+.||.++.+.
T Consensus 260 ~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~----- 333 (480)
T KOG2563|consen 260 KSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKL----- 333 (480)
T ss_pred HHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHH-----
Confidence 899999999999999888888888888777766666 47888899999999999999999999999999887631
Q ss_pred HHHHHHHHHH-HHH-HHHHhhc--cCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHH
Q 009757 398 RKILQSIGFI-APG-IALIGLT--AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILG 473 (526)
Q Consensus 398 ~~~~~~~~~~-~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~ 473 (526)
........ ... ..+.... .....+....+..++.+..+..+...-..++..+|..-++..|+.+..+++-+.+-
T Consensus 334 --~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~ 411 (480)
T KOG2563|consen 334 --TTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVIL 411 (480)
T ss_pred --HHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHH
Confidence 11111111 111 1111111 12223333333444444444444333445666778888899999999999999999
Q ss_pred HHHHhhhccccc
Q 009757 474 TVGAGFFVELVG 485 (526)
Q Consensus 474 ~~~~g~l~~~~g 485 (526)
..+.+...+..+
T Consensus 412 ~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 412 VFIMGILAEDLG 423 (480)
T ss_pred HHHHHHHhhccC
Confidence 999999888766
No 105
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.91 E-value=2e-29 Score=253.24 Aligned_cols=402 Identities=18% Similarity=0.196 Sum_probs=258.4
Q ss_pred HHHHHHHhhhhhhhhcchhhhh--hhcCC---------ccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHH
Q 009757 105 ALALALCNADRVVMSVAIVPLS--LAHGW---------SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL 173 (526)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~--~~~~~---------s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 173 (526)
.++.+..+++....+...+... ..++. +..+.+++.+...+|..+|++++|.++||+|||+.+.++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3444666777666665554444 22222 123578999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccc---chHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 009757 174 WSLATFLTPWAADT---SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (526)
Q Consensus 174 ~~~~~~~~~~~~~~---~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~ 250 (526)
..++.++.+++ + +++.+.++|+++|++.|...+....++.|..|+++|++..++.+.+..+|.+++..++..+..
T Consensus 86 ~~i~~~~~~~~--~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 86 MIIGSILIAFA--PSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred ccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 8 999999999999999999999999999999999999999999999999999999888766544
Q ss_pred hc---CchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCh-hHHHHHHHhcc-----cc-cc--cCCCCCCCCCCchHH
Q 009757 251 QA---GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISK-YELEYILREKQ-----KP-LL--MGNKHKPATVIPPFR 318 (526)
Q Consensus 251 ~~---gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~-~~--~~~~~~~~~~~~~~~ 318 (526)
.. +||..+++.+++.++..+. ..+.||+|+.....++ +|.++..++.. +. .. .++.++..+....++
T Consensus 164 ~~~~~~Wr~~~~~~~~~~l~~~~~-~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (451)
T PF00083_consen 164 YSDNWGWRILLIFGAIPSLLVLLL-RFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWR 242 (451)
T ss_pred cccccccccccccccccccccccc-ccccccccceecccccccccccccccccccccccccccccccccccccccceeee
Confidence 33 4999999988887765544 4567888875322221 12222111110 00 00 000001111113455
Q ss_pred HHHcCch----HHHHHHHHHHHH-HHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCc
Q 009757 319 RLLSKMP----TWSIIVANAMHS-WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (526)
Q Consensus 319 ~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (526)
++++++. +...+....+.. .+......+.+.++++ .|.+.. -.......+...++.++..++.||+|||+.
T Consensus 243 ~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~- 318 (451)
T PF00083_consen 243 DLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKL- 318 (451)
T ss_pred eccccccccccccccccccccccccccccccccccccccc-cccccc--cccccccccccccccccccccccccccccc-
Confidence 6666533 223232333332 2334445555666555 576665 222334445566777788899999999943
Q ss_pred cchhHHHHHHHHHHHHHHHHHhh-----ccCch----hHHHHHHHHHH-HHHHhhhhhhHHHHHHhhcc-cchhhHHHHH
Q 009757 394 VTLTRKILQSIGFIAPGIALIGL-----TAAKS----PVMASAWLTLA-IGMKSFSHSGFLVNLQEIAP-QYSGVLHGIS 462 (526)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~ 462 (526)
...+....++....+ ...+. ....+....+. .++.....+..+.+..|.+| +.|+++.|+.
T Consensus 319 --------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~ 390 (451)
T PF00083_consen 319 --------LIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLS 390 (451)
T ss_pred --------cccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 222222222222211 11121 12222222222 22222333455677789988 7999999999
Q ss_pred HHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHhcCceeccccccc
Q 009757 463 NTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTGERVNFDEAGE 521 (526)
Q Consensus 463 ~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (526)
..++.+++++++.+...+.+..+.....+...+++.+..++.+.+++++++++.+|.++
T Consensus 391 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 391 YAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred cccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHh
Confidence 99999999999999999888876333333334444444444445566776666655543
No 106
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.91 E-value=2.1e-20 Score=183.82 Aligned_cols=391 Identities=12% Similarity=0.083 Sum_probs=233.9
Q ss_pred HHHHHHHHHhhhhhhhhcchhhh-hhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh-cChHHHHHHHHHHHHHHhh
Q 009757 103 MLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFL 180 (526)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~ 180 (526)
.++...+...+..+.+...+|.+ .+++|.++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++
T Consensus 13 ~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ll 92 (493)
T PRK15462 13 YVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVV 92 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHH
Confidence 33334444444444454455544 566899999999999999999999999999999999 9999999999999999877
Q ss_pred hhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcc--hhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHH
Q 009757 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (526)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f 258 (526)
+++.. .+...++++..+.++|.|...+...++++|.+|++ +|..++++...+.++|..++|.+.+++.+..||++.|
T Consensus 93 l~~~~-~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F 171 (493)
T PRK15462 93 LGASE-IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGF 171 (493)
T ss_pred HHHhh-cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHH
Confidence 76541 12233444445555677777788889999999875 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCC---CCCCChhHHHH----------------HHHh-ccccc---------------c
Q 009757 259 VIFGLSGFLWVLVWLSATSSTPDR---HPQISKYELEY----------------ILRE-KQKPL---------------L 303 (526)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------------~~~~-~~~~~---------------~ 303 (526)
.+.++..++..+..+...+..++. ++...++++.. .... ..... .
T Consensus 172 ~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (493)
T PRK15462 172 GLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVL 251 (493)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987765544444333322111110 01111111100 0000 00000 0
Q ss_pred cCCCCCCCCCCchHHHHHcCc--hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh-----cCCcchhhhHhhHhHHHHHHH
Q 009757 304 MGNKHKPATVIPPFRRLLSKM--PTWSIIVANAMHSWGFFVILSWMPIYFNFVY-----HIDLRQASWFSAVPWSVMAFT 376 (526)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~s~~~~~~~~~~~~~~~~i~ 376 (526)
......+ .... + |+| .+..+.+...+....+....+-+..|.++.. |++ ...++..++..+..++.
T Consensus 252 ~~~~~~~-~~~~---e--r~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l 324 (493)
T PRK15462 252 AKIYRKA-ENQK---Q--RKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLC 324 (493)
T ss_pred HHHHHhc-CCHH---H--HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHH
Confidence 0000000 0000 1 111 1223333333444444445555666665532 322 23667778888888888
Q ss_pred HHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc---cC----chhHHHHHHHHHHHHHHhhhhhhHHHHHHh
Q 009757 377 GYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT---AA----KSPVMASAWLTLAIGMKSFSHSGFLVNLQE 449 (526)
Q Consensus 377 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (526)
+++.+++-.|..+|+.......|......+...+...+.+. .. .+.++.+...++......+..|.-.+.+.+
T Consensus 325 ~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~ 404 (493)
T PRK15462 325 GVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITR 404 (493)
T ss_pred HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence 88888887777554332233334443333333333222211 01 233444444444444555666777787888
Q ss_pred hcc-cchhhHHHHHHHHH-hHHHHHHHHHHhhhccc-----------cchhHHHHHHHHHHHHHH
Q 009757 450 IAP-QYSGVLHGISNTAG-TFAAILGTVGAGFFVEL-----------VGSFQGFLLLTSLLYFLS 501 (526)
Q Consensus 450 ~~~-~~~g~~~g~~~~~~-~lg~~~~~~~~g~l~~~-----------~g~~~~~~~~~~~~~~~~ 501 (526)
+.| +.+|+.+|+..... .+|..++..+.+...+. ...|...|...+...+++
T Consensus 405 laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 405 IEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 888 69999999986643 56766666666655311 113556677666655544
No 107
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.91 E-value=2.2e-22 Score=200.78 Aligned_cols=382 Identities=12% Similarity=0.008 Sum_probs=241.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhc-----ChHHHHHHHH
Q 009757 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-----GKIIMAWGVA 172 (526)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~ 172 (526)
...+.++...++..+..........|.+.+++|++.++++...++..++..+-.+ +|.++||++ ||+.++++.+
T Consensus 25 ~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 25 RVVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred chHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHH
Confidence 3445566667777777733444556666678999999999999999999999666 999999997 7777788777
Q ss_pred HH-HHHHhhhhhccccchHHH-HHHHHHhhhhccchhhhhHHHHhhhcCcchhhHH---HHHHHhhhhhHHHHHHHHHHH
Q 009757 173 LW-SLATFLTPWAADTSLLAL-LAMRAVVGLAEGVALPAMNNMVARWFPQTERARA---VAIAMGGFTSGNAIGLVLSPI 247 (526)
Q Consensus 173 ~~-~~~~~~~~~~~~~~~~~l-~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~G~~ig~~l~~~ 247 (526)
+. +++....+.. ++.... .+..++.+++.+...++..+++.|..+ +++... .++.....++|.++|+.+++.
T Consensus 104 l~~~~~~~~l~~~--~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~ 180 (468)
T TIGR00788 104 LGSAILYGLLPGK--VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGP 180 (468)
T ss_pred HHHHHHHHhcccc--cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHH
Confidence 76 3444444443 454444 448899999999999999999999998 554443 334444456899999999999
Q ss_pred HHhhcCchhHHHHHHHHHHHHHHHHHhhccCCCC-CCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchH
Q 009757 248 LMSQAGIFGPFVIFGLSGFLWVLVWLSATSSTPD-RHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPT 326 (526)
Q Consensus 248 l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (526)
+.+.++|+..|++.+++.++..+.. .+.+|++. ..+...+++......... .......+.....++.+++|.+
T Consensus 181 l~~~~~~~~~f~~~a~l~ll~~~~~-~~~~E~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~~~i 254 (468)
T TIGR00788 181 LLDKTLTRILFLITAALLLLQLFVS-NLSKERRAFVRPRIGTYLEMNMALLTL-----GVLANVKVQILGLRGAIQLLEI 254 (468)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHHH-Hhcccccccccccccccchhhhhhhhh-----hHHHHHHHHHHHHHHHHhcHHH
Confidence 9999999999999988877764433 44455421 111100000000000000 0000000112245566788888
Q ss_pred HHHHHHHHH-HHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHH
Q 009757 327 WSIIVANAM-HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (526)
Q Consensus 327 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (526)
+...+..++ +.........+. .+..+..|+++.+.|.+....+++.+++..+.+++.+|++.| ..+.++
T Consensus 255 ~~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r---------~~l~~~ 324 (468)
T TIGR00788 255 AKPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR---------LLFGVT 324 (468)
T ss_pred HHHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH---------HHHHHH
Confidence 876665555 222211111110 122345899999999999999999999998888888887766 334444
Q ss_pred HHHHHHHHHhhc----c------CchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHH
Q 009757 406 FIAPGIALIGLT----A------AKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGT 474 (526)
Q Consensus 406 ~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~ 474 (526)
.++..+..+... . .+..+......++.....+........++.+..| +.+|+.+++.+++.++|..+++
T Consensus 325 ~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~ 404 (468)
T TIGR00788 325 TLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSG 404 (468)
T ss_pred HHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHH
Confidence 444443332211 0 0122222222233333333444444555555655 7999999999999999999999
Q ss_pred HHHhhhccccc----hhHHHHHHHHHHHH
Q 009757 475 VGAGFFVELVG----SFQGFLLLTSLLYF 499 (526)
Q Consensus 475 ~~~g~l~~~~g----~~~~~~~~~~~~~~ 499 (526)
.++|.+.++.| ++...+....++.+
T Consensus 405 ~~gg~l~~~~g~~~~~~~~~~~~i~i~~~ 433 (468)
T TIGR00788 405 FLGVLLMETIGITCDNSNNLWLLILGHSL 433 (468)
T ss_pred HHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence 99999998876 24444444333333
No 108
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.90 E-value=4.2e-21 Score=180.99 Aligned_cols=277 Identities=12% Similarity=0.064 Sum_probs=197.4
Q ss_pred cchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh---------------
Q 009757 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--------------- 251 (526)
Q Consensus 187 ~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~--------------- 251 (526)
.+|+.++++-++.|.|.+...+..+.++++..+++++++.+++.+..+++|.+++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~ 87 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAE 87 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHH
Confidence 78999999999999999999999999999999999999999999999999999999999988732
Q ss_pred -cCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHH
Q 009757 252 -AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII 330 (526)
Q Consensus 252 -~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (526)
.+|+++|++.+++.++..+++.+. + .|+.+++.+ ++ ..+ ++. ...+..+++|.++...
T Consensus 88 ~~~~~~~yl~ia~~~~~~~i~~~~~-~-~p~~~~~~~--~~-------------~~~-~~~---~~~~~~~~~~~~~l~~ 146 (310)
T TIGR01272 88 AAKVHTPYLLLAGALAVLAIIFAFL-P-LPELQEADV--AR-------------VSS-GDT---TQKTSAFQFTHLVLGA 146 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-c-CCCCCcccc--cc-------------ccc-ccc---cchhhHHhhHHHHHHH
Confidence 469999997777655555443332 1 111111000 00 000 000 1122467788888888
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHH--hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHH
Q 009757 331 VANAMHSWGFFVILSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (526)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (526)
+..+++.....++..|.+.|+++. +|+++.+++...+....+.++|+++.+++.||+++++ . +.++..+
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~--------~-l~~~~~l 217 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR--------Y-LAFNAFL 217 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH--------H-HHHHHHH
Confidence 888888889999999999999864 6899999999999999999999999999999999772 1 2222222
Q ss_pred HHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhH
Q 009757 409 PGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQ 488 (526)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~ 488 (526)
..+..++....+.....+...+++ .+.+...|.......+..|++.+++.++. .+..+|++++|++.|.+.|..| ..
T Consensus 218 ~~~~~~l~~~~~~~~~~~~~~l~g-~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~ 294 (310)
T TIGR01272 218 AVLLSIGAALTHGYVAMWFVLALG-LFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQ 294 (310)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-ch
Confidence 222222222222232223233333 33444455555555565666667777775 6778999999999999999887 66
Q ss_pred HHHHHHHH
Q 009757 489 GFLLLTSL 496 (526)
Q Consensus 489 ~~~~~~~~ 496 (526)
..+++...
T Consensus 295 ~a~~v~~~ 302 (310)
T TIGR01272 295 LAFALPVP 302 (310)
T ss_pred HHHHHHHH
Confidence 66664333
No 109
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.90 E-value=5.8e-21 Score=192.04 Aligned_cols=354 Identities=11% Similarity=-0.005 Sum_probs=229.4
Q ss_pred HHHHHHhhhhhhhhcc-hhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHh----HhcC-hHHHHHHHHHHHHHHh
Q 009757 106 LALALCNADRVVMSVA-IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGG-KIIMAWGVALWSLATF 179 (526)
Q Consensus 106 ~~~~~~~~~~~~~~~~-~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Gr-r~~l~~~~~~~~~~~~ 179 (526)
++.+...+......+. ...+.+.+|+++.++|.+..+..+..++..|+.|.++| |+|| |+.++++.+..+++.+
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 3334344444444443 44556667999999999999999999999999999999 5698 5677778888888766
Q ss_pred hhhhcc--cc--chHHHHHHHHHhhhhccchhhhhHHHHhhhc-CcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh---
Q 009757 180 LTPWAA--DT--SLLALLAMRAVVGLAEGVALPAMNNMVARWF-PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--- 251 (526)
Q Consensus 180 ~~~~~~--~~--~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~--- 251 (526)
++...+ .+ .++.+++..++.+++.....+...++..|.. ++++|.+..++...+.++|..+++.+...+.+.
T Consensus 93 llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~ 172 (473)
T PRK10429 93 LLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGG 172 (473)
T ss_pred HHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 654431 01 1345566667778888888888999999998 589999999997887888767666655443322
Q ss_pred ----cCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHH
Q 009757 252 ----AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW 327 (526)
Q Consensus 252 ----~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (526)
.+|+....+.+++.++..+..++..+|.+...... .+++++.+.++.++.+++||.++
T Consensus 173 ~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~------------------~~~~~~~~~~~~~~~~~~n~~~~ 234 (473)
T PRK10429 173 GDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV------------------SAEGSHLTLKDIVALIYKNDQLS 234 (473)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccc------------------cccccCCCHHHHHHHHhcCHHHH
Confidence 24666666666666655555555455543211100 01111223344566677899888
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 009757 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (526)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (526)
.+++..++..........+.+.|.+...+ +....+.+.....++.+++.++.+++.||+|+|+ .......+.
T Consensus 235 ~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~-------~~~~~~~~~ 306 (473)
T PRK10429 235 CLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI-------LWAGASIFP 306 (473)
T ss_pred HHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-------HHHHHHHHH
Confidence 88888887777777776777766665433 4555666767767888999999999999999882 222122111
Q ss_pred HHH-HHHHhh--ccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc--------cchhhHHHHHHHHHhHHHHHHHHH
Q 009757 408 APG-IALIGL--TAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVG 476 (526)
Q Consensus 408 ~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~lg~~~~~~~ 476 (526)
+.+ +.+... ....+.+..++..++.....+........+..|..+ +..|..+|....+..++..+++.+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i 386 (473)
T PRK10429 307 VLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFF 386 (473)
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 111 111111 122333333333333323333444555556666533 245669999999999999999999
Q ss_pred Hhhhccccc
Q 009757 477 AGFFVELVG 485 (526)
Q Consensus 477 ~g~l~~~~g 485 (526)
.|++.+..|
T Consensus 387 ~g~~l~~~G 395 (473)
T PRK10429 387 IGVVLGLIG 395 (473)
T ss_pred HHHHHHHcC
Confidence 999988665
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.90 E-value=6.9e-21 Score=190.69 Aligned_cols=347 Identities=12% Similarity=0.045 Sum_probs=211.2
Q ss_pred HHHHHHhhhhhhhhc-chhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh----cChHH-HHHHHHHHHHHHh
Q 009757 106 LALALCNADRVVMSV-AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY----GGKII-MAWGVALWSLATF 179 (526)
Q Consensus 106 ~~~~~~~~~~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~----Grr~~-l~~~~~~~~~~~~ 179 (526)
++.+..........+ ..+++.+.+|++..++|.+.++..+..++..++.|+++||. ||||. ++++.+...+..+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 333333333333333 34566677899999999999999999999999999999996 76664 4556555554444
Q ss_pred hhhhcc---cc--chHHHHHHHHHhhhhccchhhhhHHHHhhhcC-cchhhHHHHHHHhhhh-----hHHHHHHHHHHHH
Q 009757 180 LTPWAA---DT--SLLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFT-----SGNAIGLVLSPIL 248 (526)
Q Consensus 180 ~~~~~~---~~--~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~G~~ig~~l~~~l 248 (526)
+....+ .+ ..+.+++..++.+++.+...+...++..+..+ +++|.+..++-..+.+ ++..++|.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 95 LVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 322111 01 22334555667788888888777787777664 4678887776654433 4444555554432
Q ss_pred Hhhc--CchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchH
Q 009757 249 MSQA--GIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPT 326 (526)
Q Consensus 249 ~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (526)
.... +|.....+.+++.++..++.....+|+++++ .++......++.++|||.+
T Consensus 175 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~------------------------~~~~~~~~~~~~l~~n~~f 230 (448)
T PRK09848 175 PEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRI------------------------VAQPSLKISLQTLKRNRPL 230 (448)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCC------------------------ccCCCHHHHHHHHhCCchH
Confidence 1110 1211122233333333333333333332111 0111233457789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHH
Q 009757 327 WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF 406 (526)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 406 (526)
+...+..++...+........|.|+++.+|.+....++......++.+++.++.+++.||+++|+ ....+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~---------~~~~g~ 301 (448)
T PRK09848 231 FMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN---------TFLIGA 301 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH---------HHHHHH
Confidence 99888888888888888888888888888877665555555545677888999999999999872 222333
Q ss_pred HHHHHHHHh--hccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc--------cchhhHHHHHHHHHhHHHHHHHHH
Q 009757 407 IAPGIALIG--LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVG 476 (526)
Q Consensus 407 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~lg~~~~~~~ 476 (526)
++..+..+. +....+.+......++.....+...+.......+..+ ++.|..+|+.+....+|..+++.+
T Consensus 302 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i 381 (448)
T PRK09848 302 LLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSI 381 (448)
T ss_pred HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 332222222 2222233333332322222233334445555555544 245999999999999999999999
Q ss_pred Hhhhccccc
Q 009757 477 AGFFVELVG 485 (526)
Q Consensus 477 ~g~l~~~~g 485 (526)
.|.+.+..|
T Consensus 382 ~g~~l~~~G 390 (448)
T PRK09848 382 PAFILGLSG 390 (448)
T ss_pred HHHHHHHcC
Confidence 999887655
No 111
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.88 E-value=6.1e-21 Score=189.78 Aligned_cols=335 Identities=18% Similarity=0.190 Sum_probs=249.3
Q ss_pred cchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHh----HhcChH-HHHHHHHHHHHHHhhhhhc-c-c----cc
Q 009757 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD----YYGGKI-IMAWGVALWSLATFLTPWA-A-D----TS 188 (526)
Q Consensus 120 ~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~-~l~~~~~~~~~~~~~~~~~-~-~----~~ 188 (526)
...+.+.+.+|+++..+|.+..+..+..++..|+.|.++| |+|||| .++++....+++.+++... + . ..
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 3456677778999999999999999999999999999999 899765 5667888888887776654 1 0 12
Q ss_pred hHHHHHHHHHhhhhccchhhhhHHHHhhhcC-cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc-------CchhHHHH
Q 009757 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVI 260 (526)
Q Consensus 189 ~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~-------gw~~~f~~ 260 (526)
...+++..++..++.........++..|..+ +++|.+..++-..+..+|.++...+.+.+.+.. +|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 3345777777799999999999999999997 578999999999999999877777766665422 58888888
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHH
Q 009757 261 FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGF 340 (526)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (526)
.+++.++..++..+..+|.+++. ++++++.+..+.++.+++||.++.+.+..++...+.
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~---------------------~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~ 241 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEV---------------------TEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAF 241 (428)
T ss_pred HHHHHHHHhhhhhheeeeccccc---------------------cccccccccccchhhhcccchHHHHHHHHHHHHhhh
Confidence 88888888777777777621111 222333445667889999999999999999988888
Q ss_pred HHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccC-
Q 009757 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA- 419 (526)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 419 (526)
.......+.|.++..|.+ ...+.+.....++..++.++.+++.||+|+|+. ...+..+.++..+.+...
T Consensus 242 ~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~---------~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 242 ALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV---------YIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred hhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee---------hhhhHHHHHHHHHHHHHHH
Confidence 888888999999987776 566777778889999999999999999999832 222223222222222222
Q ss_pred -chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc--------cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc
Q 009757 420 -KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 420 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g 485 (526)
++.+...+..++.....+.......+...|+.+ +..|..+|+.+....++..+++.+.|.+.+..|
T Consensus 312 ~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 312 PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 345544444444443344444555555555543 346999999999999999999999999987665
No 112
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.88 E-value=7.9e-20 Score=169.14 Aligned_cols=355 Identities=14% Similarity=0.080 Sum_probs=261.2
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhHHHhHhcChH-HHHHHHHHHHHHHhhhhhccc-cchHHHHHHHHHhhhhccchhhhh
Q 009757 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI-IMAWGVALWSLATFLTPWAAD-TSLLALLAMRAVVGLAEGVALPAM 210 (526)
Q Consensus 133 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~Gig~g~~~~~~ 210 (526)
.+..|...++..+..++.+|+.|.++|+.|+|| .+-....+..++.++..+..+ ..++..++...+..++.....+..
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 345688888999999999999999999999665 555555666666666777643 245556667888899999999999
Q ss_pred HHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHH------------------hhcCchhHHHHHHHHHHHHHHHH
Q 009757 211 NNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM------------------SQAGIFGPFVIFGLSGFLWVLVW 272 (526)
Q Consensus 211 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~------------------~~~gw~~~f~~~~~~~~~~~~~~ 272 (526)
.+++.+..++++-++..++-.....+|+.+--+..-... +...-|..+.+.++..++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 999999999999899888888888888877666542221 12246778888888888888888
Q ss_pred HhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 009757 273 LSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFN 352 (526)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (526)
++..++.++......+.-.+. -++.+.++++..+++.+....+..+++.-+.+++......|..
T Consensus 217 ~~~v~~~~~~~~~~~~~l~~g----------------~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~ 280 (438)
T COG2270 217 ILNVHDAEKISSPPPTALRNG----------------FKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGA 280 (438)
T ss_pred HhcccccccccccchHHHHHH----------------HHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 887777664321111100000 1112346778888899999999999999999999999999999
Q ss_pred HHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHH
Q 009757 353 FVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLA 432 (526)
Q Consensus 353 ~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (526)
..+|++..+..++.....+..++|.++.|++.||++.|+. +.....+...+.+..+.........+..++++
T Consensus 281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~v--------l~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g 352 (438)
T COG2270 281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPV--------LMIGLVILSIAALYLIFLEGELDFWILGLLVG 352 (438)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcee--------ehHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 8899999999999999999999999999999999998832 22222222222333333333333334445555
Q ss_pred HHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 009757 433 IGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTG 511 (526)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (526)
...++.....-..+...++|++.++.+|+++..+..++.+||.+.+.+.+.+|+.+..+....++..++.+++...+.+
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 5555444444444455555579999999999999999999999999999999988888888888888887776655433
No 113
>PRK11462 putative transporter; Provisional
Probab=99.87 E-value=6.9e-19 Score=175.68 Aligned_cols=332 Identities=12% Similarity=0.082 Sum_probs=217.9
Q ss_pred chhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhH----hcChH-HHHHHHHHHHHHHhhhhhccccc----hHH
Q 009757 121 AIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKI-IMAWGVALWSLATFLTPWAADTS----LLA 191 (526)
Q Consensus 121 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~~~----~~~ 191 (526)
....+.+..|+++..+|.+..+.-+--++..|+.|.++|| +|||| .++++.+..+++.+++...+..+ +..
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y 111 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIY 111 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3445667789999999999999999999999999999996 68764 56677778888777665442111 345
Q ss_pred HHHHHHHhhhhccchhhhhHHHHhhhcC-cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc-------CchhHHHHHHH
Q 009757 192 LLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVIFGL 263 (526)
Q Consensus 192 l~~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~-------gw~~~f~~~~~ 263 (526)
+++..++..++.........++..|..+ +++|++..++...+..+|..+++.+...+.+.. +|+....+.++
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 6666777788888888888999999986 789999999999999999888888766555433 47777777777
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHH
Q 009757 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (526)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (526)
+.+++.++.+...+|.++..+ ++.+.++.++..++||.++.+....++........
T Consensus 192 i~~i~~~i~~~~~kE~~~~~~------------------------~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~ 247 (460)
T PRK11462 192 VAFMMLAFCFFTTKERVEAPP------------------------TTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVR 247 (460)
T ss_pred HHHHHHHHHHhcceeccCCCc------------------------cCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 666666555554444322110 11123345678888998887776666666655555
Q ss_pred HHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHH-HHHHHhhccCchh
Q 009757 344 LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAP-GIALIGLTAAKSP 422 (526)
Q Consensus 344 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 422 (526)
......|.+...|. ....+.+.....++.+++.++++++.||+++|+ ........... .+.+... ...+.
T Consensus 248 ~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~-------~~~~~~~~~~~~~~~~~~~-~~~~~ 318 (460)
T PRK11462 248 GGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVT-------IFWWTNALLAVISLAMFFV-PMQAS 318 (460)
T ss_pred HhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-------HHHHHHHHHHHHHHHHHHh-chhHH
Confidence 55555555554443 334455666777888899999999999998872 22211111111 1111111 12222
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHhhcc--------cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc
Q 009757 423 VMASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g 485 (526)
+......++.....+...+..+.+..|..+ +..|..++.......+|..+++.+.|.+.+..|
T Consensus 319 ~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 319 ITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 222222222222223333444555555543 233666677778899999999999999887654
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.87 E-value=4.5e-19 Score=169.76 Aligned_cols=352 Identities=16% Similarity=0.129 Sum_probs=260.6
Q ss_pred HHHHHHhhhhhhhhcch-hhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhH----hcC-hHHHHHHHHHHHHHHh
Q 009757 106 LALALCNADRVVMSVAI-VPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGG-KIIMAWGVALWSLATF 179 (526)
Q Consensus 106 ~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Gr-r~~l~~~~~~~~~~~~ 179 (526)
++-+............+ -.+.+.+|+++..+|.+..+.-+--++..|+.|.++|| +|| |+.++++.+..++.+.
T Consensus 19 ~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~ 98 (467)
T COG2211 19 LGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAV 98 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHH
Confidence 33344433333333333 34566789999999999999999999999999999996 576 4577788888888888
Q ss_pred hhhhccc----cchHHHHHHHHHhhhhccchhhhhHHHHhhhcC-cchhhHHHHHHHhhhhhHHHHHHHHHHHHHh----
Q 009757 180 LTPWAAD----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMS---- 250 (526)
Q Consensus 180 ~~~~~~~----~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~---- 250 (526)
++..+++ .+....++...+.+++.........++.+++.+ ++||.+..++-..+.++|..+...+...+..
T Consensus 99 l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~ 178 (467)
T COG2211 99 LLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG 178 (467)
T ss_pred HHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8777731 245556777888999999888888899999885 6899999999999999998887777766654
Q ss_pred ---hcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHH
Q 009757 251 ---QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTW 327 (526)
Q Consensus 251 ---~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (526)
..||+...++.+++.++..+.+++-.+|++.+... .++..+.+....+...++|+.++
T Consensus 179 ~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~-------------------~~~~~~~~~~~~~~~~~~Nrp~~ 239 (467)
T COG2211 179 GDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQP-------------------TKTGVKLKLKDSFLLIFKNRPLL 239 (467)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCcccc-------------------CcccccccHHHHHHHHHccchHH
Confidence 34788888888888888888888877776543221 11112233334555788999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 009757 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (526)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (526)
..++..++...+..........|.+..+|.+.............+.+++.++..++.+|+|+|+ +...+.+
T Consensus 240 ~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~---------~~~~~~~ 310 (467)
T COG2211 240 LLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKK---------LFLIGLL 310 (467)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH---------HHHHHHH
Confidence 9998888888888888888888888888888888888888878888888999999999999992 2333333
Q ss_pred HHHHHHHh--hccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc--------cchhhHHHHHHHHHhHHHHHHHHHH
Q 009757 408 APGIALIG--LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP--------QYSGVLHGISNTAGTFAAILGTVGA 477 (526)
Q Consensus 408 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~lg~~~~~~~~ 477 (526)
+..+.... +...++.++.++..++.....+...+..++++.|..+ +..|..+|....+..+|.+++..+.
T Consensus 311 ~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 311 LLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred HHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 33333332 2223445555555555555566666777777766543 3468899999999999999999999
Q ss_pred hhhccccc
Q 009757 478 GFFVELVG 485 (526)
Q Consensus 478 g~l~~~~g 485 (526)
|++.+..|
T Consensus 391 g~~L~~~G 398 (467)
T COG2211 391 GWILGAIG 398 (467)
T ss_pred HHHHHHcC
Confidence 99988776
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.84 E-value=5.1e-18 Score=160.90 Aligned_cols=402 Identities=14% Similarity=0.129 Sum_probs=247.6
Q ss_pred HHHHHHHHHHhhhhhhh-hcchhhhhhhcC----CccchhhHHHHHHHHHHHHhhhhhhHHHhHh-cChHHHHHHHHHHH
Q 009757 102 SMLALALALCNADRVVM-SVAIVPLSLAHG----WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWS 175 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~----~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~ 175 (526)
..++...+-..+..+.+ .+..-++..+++ +++++..-+.+.|..-..+..+++|+++||+ |+|+++++|.++++
T Consensus 24 ~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~ 103 (498)
T COG3104 24 YLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMA 103 (498)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 33344444444444333 334455555555 9999999999999998899999999999997 99999999999999
Q ss_pred HHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcc--hhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Q 009757 176 LATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQT--ERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (526)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g 253 (526)
+|.++.+.....+...++++-.+.++|.|..-+...+++.|.+|++ +|...++++.++.++|++++|++.+++.+.+|
T Consensus 104 iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g 183 (498)
T COG3104 104 IGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYG 183 (498)
T ss_pred HHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhC
Confidence 9999988871126778999999999999999999999999999854 47889999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCCCCC-----CCChhHHHH-----H---HHh------cccc-------------
Q 009757 254 IFGPFVIFGLSGFLWVLVWLSATSSTPDRHP-----QISKYELEY-----I---LRE------KQKP------------- 301 (526)
Q Consensus 254 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-----~---~~~------~~~~------------- 301 (526)
|+..|.+.++-..+.++..++..+....... .....+... . ... ..+.
T Consensus 184 ~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~ 263 (498)
T COG3104 184 WHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIA 263 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998877776666555432211110 011110000 0 000 0000
Q ss_pred --cccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCC----cchhhhHhhHhHHHHHH
Q 009757 302 --LLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHID----LRQASWFSAVPWSVMAF 375 (526)
Q Consensus 302 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s----~~~~~~~~~~~~~~~~i 375 (526)
...+..+.++.. ..-++++ ....+.+...+++..+....+.+..|..+....+ ....++..+...+.-++
T Consensus 264 ~~~~~~~~~~~~~~-~er~r~~---~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii 339 (498)
T COG3104 264 IIYFAEAFRSPKVF-DERRRLL---AAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIIL 339 (498)
T ss_pred HHHHHHHhccCccH-HHHHHHH---HHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHH
Confidence 000000000000 1111111 1222333333333333333444444544422111 23467778888888888
Q ss_pred HHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc---cC-----chhHHHHHHHHHHHHHHhhhhhhHHHHH
Q 009757 376 TGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT---AA-----KSPVMASAWLTLAIGMKSFSHSGFLVNL 447 (526)
Q Consensus 376 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (526)
..++..++..|.++++.......+..+...+..++..++... .. .+.++.+...++....-.+..+.-...+
T Consensus 340 ~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~ 419 (498)
T COG3104 340 FSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMV 419 (498)
T ss_pred HHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 999999999997766544444444444444444333333322 11 2344444444444444445555555555
Q ss_pred Hhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhh------hccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 448 QEIAP-QYSGVLHGISNTAGTFAAILGTVGAGF------FVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 448 ~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
....| ...+.+++........+..++..+.+. ..+.. .....|..++...++..+..+..
T Consensus 420 t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 420 TKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHHHHHHHHHHHHHHHh
Confidence 55555 578888888777777777777666663 22222 25566777766666555544433
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.84 E-value=6e-19 Score=169.21 Aligned_cols=392 Identities=14% Similarity=0.141 Sum_probs=250.8
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhh--cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcC-hHHHHHHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGV 171 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~ 171 (526)
+.+|+.+.+..+..++.....+.+.+..-++.++ .+.+.+..|++.++..++.+++++..|++..|.+. |+.++.+.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 4567888888888898888888777776555555 77888899999999999999999999999999997 88899999
Q ss_pred HHHHHHHhhh-hhcc--ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q 009757 172 ALWSLATFLT-PWAA--DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 172 ~~~~~~~~~~-~~~~--~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 248 (526)
++..++.+++ ++.. +..-+.++++|++.|+|.|. .....+|+++....++|.++++....+..+|.++||.++..+
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 9999999987 4332 23678899999999999877 667789999988889999999999999999999999988776
Q ss_pred Hhh--cC-----------chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCc
Q 009757 249 MSQ--AG-----------IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIP 315 (526)
Q Consensus 249 ~~~--~g-----------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (526)
..- -| +..+-|+.+++.++..+...+..+|.++...+.+.+..+.. . .++++.+..+.
T Consensus 189 ~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~ 259 (488)
T KOG2325|consen 189 TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEE----K-----SDIEKVKKPKL 259 (488)
T ss_pred hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhh----c-----cchhhhccCCh
Confidence 531 11 33466778888887777777777776554432211110000 0 00000111111
Q ss_pred hHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHH-HHH-HHHHHHHHHHHhhcCc
Q 009757 316 PFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMA-FTG-YLGGLLSDMLIQRGTS 393 (526)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~-i~~-~~~g~l~dr~~~~~~~ 393 (526)
++ +..+.+.+..+...+.+....+..+.+....++++..++....+....... +.. +......-|+++...
T Consensus 260 d~------~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~- 332 (488)
T KOG2325|consen 260 DW------VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDK- 332 (488)
T ss_pred hH------HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcc-
Confidence 11 123445555566666666667777777777788887776555444332222 211 222223333333100
Q ss_pred cchhHHHHHHHHHHHHHHHH---HhhccCch---------------------------hHHHHHH--HHHHHHHHhhhhh
Q 009757 394 VTLTRKILQSIGFIAPGIAL---IGLTAAKS---------------------------PVMASAW--LTLAIGMKSFSHS 441 (526)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---------------------------~~~~~~~--~~~~~~~~~~~~~ 441 (526)
|..+...++....... ..+.+... .+..+.. ++++.++-.....
T Consensus 333 ----r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~ 408 (488)
T KOG2325|consen 333 ----RRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTA 408 (488)
T ss_pred ----ceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccch
Confidence 0111111111111111 11111110 0011111 1111222212223
Q ss_pred hHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 442 GFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 442 ~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
....+..-+.|++++++.|++......+..++|.+...+....| ++..+.+..+..++...++...
T Consensus 409 ~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~~~~l~~~~ 474 (488)
T KOG2325|consen 409 LDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLVVAALWIVF 474 (488)
T ss_pred HHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHHHHHHHHHH
Confidence 44556666778999999999999999999999999999999988 7777777666666555554444
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.83 E-value=5.7e-17 Score=150.99 Aligned_cols=355 Identities=15% Similarity=0.143 Sum_probs=243.0
Q ss_pred hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhc-----ChHH-HHHHHHHHHHHHhhhhhcc----c-------c
Q 009757 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-----GKII-MAWGVALWSLATFLTPWAA----D-------T 187 (526)
Q Consensus 125 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~-l~~~~~~~~~~~~~~~~~~----~-------~ 187 (526)
+..|++++....+.+.++..+... ..+.+|+.+|+.+ ||.. +..|.+....+..+.+++. . +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567899999999999998888765 5888999999998 7754 4455666555555444331 1 1
Q ss_pred c-hH--HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHH---H
Q 009757 188 S-LL--ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI---F 261 (526)
Q Consensus 188 ~-~~--~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~---~ 261 (526)
. .+ ...+.-.+.|+|.+...++..+++.|..|+++|+++.++.....-+|.+++..+.+.+.+.+.-.-...+ .
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 1 22 2445567889999999999999999999999999999999999999999999999998887663333222 2
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHH
Q 009757 262 GLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFF 341 (526)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (526)
+++.++..++..+ ..|++.++.. ...++++.+..+.++++..+|+...+....++...+++
T Consensus 165 a~i~~~l~~ia~w-g~E~r~~~~~------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~ 225 (403)
T PF03209_consen 165 ALIALLLNLIALW-GQEPRRSRRA------------------AAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFF 225 (403)
T ss_pred HHHHHHHHHHHHH-hcccCCcccc------------------cCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHH
Confidence 2222222222222 2222222111 01233344455677888899999888888888888888
Q ss_pred HHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHH-HHhhcCccchhHHHHHHHHHHHHHH---HHHhhc
Q 009757 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKILQSIGFIAPGI---ALIGLT 417 (526)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 417 (526)
.-...+-+|--+++|++..+..-+......+..+|....+++..| .+++ + ....+...... .+....
T Consensus 226 ~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-------~--~a~~G~~~~~~~f~lii~a~ 296 (403)
T PF03209_consen 226 MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-------R--TAALGCLLGALAFALIILAG 296 (403)
T ss_pred hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-------H--HHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999988764 3332 1 11122222211 122223
Q ss_pred cCchhHHHHHHHH-HHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhcccc----c-----hh
Q 009757 418 AAKSPVMASAWLT-LAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELV----G-----SF 487 (526)
Q Consensus 418 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~----g-----~~ 487 (526)
...+.+.+....+ ++++.+.+........+....+++.|..+|.....+.++..++..++|.+.|.. + .|
T Consensus 297 ~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY 376 (403)
T PF03209_consen 297 PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAY 376 (403)
T ss_pred hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHH
Confidence 3344555444444 444444444444445555555689999999999999999999999999988732 2 36
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 009757 488 QGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~ 508 (526)
...|.+=++..++++++...+
T Consensus 377 ~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 377 GVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 666766666666666555444
No 118
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.82 E-value=1.6e-18 Score=172.94 Aligned_cols=292 Identities=16% Similarity=0.150 Sum_probs=229.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHH
Q 009757 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (526)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 178 (526)
..+.++++..+...+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|..|-|.+-+|.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 44556667777777777888888999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcc------------------cc-----------------------------c--hH-HHHHHHHHhhhhccchhh
Q 009757 179 FLTPWAA------------------DT-----------------------------S--LL-ALLAMRAVVGLAEGVALP 208 (526)
Q Consensus 179 ~~~~~~~------------------~~-----------------------------~--~~-~l~~~r~l~Gig~g~~~~ 208 (526)
+++++-. .+ + ++ .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 9987630 00 0 23 567789999999999999
Q ss_pred hhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc------------------C-chhHHHHHHHHHHHHH
Q 009757 209 AMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA------------------G-IFGPFVIFGLSGFLWV 269 (526)
Q Consensus 209 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~------------------g-w~~~f~~~~~~~~~~~ 269 (526)
...+|+-|...+++-...+|+......+|.++|.++++++...+ | |..-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986521 1 6667888888888888
Q ss_pred HHHHhhccCCCCCCCCCChhHHHHHHHhcc-cccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHH
Q 009757 270 LVWLSATSSTPDRHPQISKYELEYILREKQ-KPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMP 348 (526)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (526)
+.++++.++.|+..++....+.+....+.. .+......++-++....++.+++||.+...++...+....+.++.+|+|
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlP 416 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLP 416 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhH
Confidence 888888777665544311111111100000 0000000001123345667889999999999999999999999999999
Q ss_pred HHHHHHhcCCcchhhhHhhHhHHH-HHHHHHHHHHHHHHHHhh
Q 009757 349 IYFNFVYHIDLRQASWFSAVPWSV-MAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 349 ~~~~~~~g~s~~~~~~~~~~~~~~-~~i~~~~~g~l~dr~~~~ 390 (526)
-|++.++|.++..+..++....+. ..+|.+++|++.+|+.-+
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 999999999999999998766654 577889999999988644
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.79 E-value=8.2e-21 Score=190.01 Aligned_cols=380 Identities=15% Similarity=0.137 Sum_probs=3.0
Q ss_pred HHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhh
Q 009757 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 181 (526)
+.+++..+...+........+..+.++|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++++++++++
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHH
Confidence 34445555556666677888999999999999999999999999999999999999999888899999999999999987
Q ss_pred hhcc------------------------c------------------------cchHHHHHHHHHhhhhccchhhhhHHH
Q 009757 182 PWAA------------------------D------------------------TSLLALLAMRAVVGLAEGVALPAMNNM 213 (526)
Q Consensus 182 ~~~~------------------------~------------------------~~~~~l~~~r~l~Gig~g~~~~~~~~~ 213 (526)
++-. . .-++.++++.++.|+|....++...+|
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 6531 0 013568889999999999999999999
Q ss_pred HhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc---------------------C-chhHHHHHHHHHHHHHHH
Q 009757 214 VARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA---------------------G-IFGPFVIFGLSGFLWVLV 271 (526)
Q Consensus 214 i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~---------------------g-w~~~f~~~~~~~~~~~~~ 271 (526)
+-|..++++-+..+|++.+...+|.++|.++++.+.+.+ | |..-|++.+++.++..+.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998776421 2 666777788887777777
Q ss_pred HHhhccCCCCCCCCCChhHHHHHHH-hcccccccCC------CCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHH
Q 009757 272 WLSATSSTPDRHPQISKYELEYILR-EKQKPLLMGN------KHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVIL 344 (526)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (526)
.+.+.++-|...+..++++.+.... +.......+. ....++....++.+++||.+....+..........++.
T Consensus 246 l~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~ 325 (539)
T PF03137_consen 246 LFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFA 325 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 7777666665522111111110000 0000000000 12234456677889999999999999999999999999
Q ss_pred HhHHHHHHHHhcCCcchhhhHhhHhHH-HHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHH--HHHhhc----
Q 009757 345 SWMPIYFNFVYHIDLRQASWFSAVPWS-VMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGI--ALIGLT---- 417 (526)
Q Consensus 345 ~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---- 417 (526)
++.|-|++.+++.++.+++++.....+ +.++|.+++|++.+|++-+.... .+......++.... ..+.+.
T Consensus 326 tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~---~~~~~v~~~v~~~~~~~~~~~~C~~~ 402 (539)
T PF03137_consen 326 TFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGA---AKFCIVVSIVSVILYSPLFFLGCPNP 402 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHH---HHHHHHHHHHHHHHHHHHHeecCCCC
Confidence 999999999999999999998876665 56788899999999986542111 11111222211111 011110
Q ss_pred --------c---------------------------Cc---------hhHHHHHHHHHH-HHHHhhhhhhHHHHHHhhcc
Q 009757 418 --------A---------------------------AK---------SPVMASAWLTLA-IGMKSFSHSGFLVNLQEIAP 452 (526)
Q Consensus 418 --------~---------------------------~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 452 (526)
. .. ....+.+..++. +..+....+........+.+
T Consensus 403 ~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~ 482 (539)
T PF03137_consen 403 PIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPP 482 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCCh
Confidence 0 00 001111111222 22222333445555666677
Q ss_pred cchhhHHHHHHHHHh-HHHHHHHHHHhhhcccc
Q 009757 453 QYSGVLHGISNTAGT-FAAILGTVGAGFFVELV 484 (526)
Q Consensus 453 ~~~g~~~g~~~~~~~-lg~~~~~~~~g~l~~~~ 484 (526)
++|+.+.|+...+.. +|.+-+|+++|.+.|..
T Consensus 483 ~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 483 EQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ---------------------------------
T ss_pred hhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 899999999987766 77788999999999963
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.75 E-value=6.5e-16 Score=150.84 Aligned_cols=363 Identities=18% Similarity=0.131 Sum_probs=248.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccc-hhhHHHHH----HHHHHHHhhhhhhHHHhHhcChHHHHHHHH
Q 009757 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRS-FSGIVQSS----FLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~-~~g~~~s~----~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
+.......+-.+...+.........+.....++.+.. ..+..... ..+...+.++..|.++||+|||..+.+..+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 4445555555555555555555556666655543322 22333333 367778899999999999999999999999
Q ss_pred HHHHHHhhhhhccccchHHHHHHHHHhhhhc--cchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 009757 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAE--GVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (526)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~--g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~ 250 (526)
...+..+...+. . +|.++ +.|+.. +.......++++|....++|....++.......+..++|.+++.+..
T Consensus 101 ~~~l~~~~~~~~--~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~ 173 (463)
T KOG2816|consen 101 GTILPALCLLFQ--G-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK 173 (463)
T ss_pred HHHHhHHHHHHH--H-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999988888776 3 44444 444443 34567788999999999999999999999999999999999999999
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHH
Q 009757 251 QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSII 330 (526)
Q Consensus 251 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (526)
..|.-..|.+.++..++..+..++..||+..++...+....+ .... ........+..+..+..-.+|..+.++
T Consensus 174 ~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~r~~l~l~ 246 (463)
T KOG2816|consen 174 FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE-----LTPG--SLDSSHVADAFQSLTKVGPDRLLLLLL 246 (463)
T ss_pred hcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc-----cCCC--cccchhhhhhhhhhcccCCCccchHHH
Confidence 999999999999999888888888888875544332100000 0000 000000111111111222234455545
Q ss_pred HHHHHHHHHHHHHHH-hHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHH-HHHHHHHhhcCccchhHHHHHHHHHHH
Q 009757 331 VANAMHSWGFFVILS-WMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGG-LLSDMLIQRGTSVTLTRKILQSIGFIA 408 (526)
Q Consensus 331 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g-~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (526)
+..++......+-.. ..+.|++..+|++..+.+.+.+.......++.++.. .+...++.+ ..+..++..
T Consensus 247 l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~---------~~i~lGl~~ 317 (463)
T KOG2816|consen 247 LVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK---------RLISLGLLS 317 (463)
T ss_pred HHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------hHhhHHHHH
Confidence 544444443332222 447788888999999999999999999999987777 666667766 356677777
Q ss_pred HHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccc
Q 009757 409 PGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVEL 483 (526)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~ 483 (526)
-.+..+.+.+....|..+....+........+...........++++|+++++...+..+...++|.+.+.+...
T Consensus 318 ~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 318 EFLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred HHHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 777777777777777766665554444434333444444455568999999999999999999999999988654
No 121
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.70 E-value=1.4e-14 Score=132.92 Aligned_cols=263 Identities=15% Similarity=0.076 Sum_probs=181.9
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (526)
+.++..+.+-.+....++ ..+|..-.+.+++|.+..|++.+.........+...+.|.++||+|||+..++.+++.
T Consensus 34 ~Fqr~yl~vY~La~~aDW----LQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily 109 (354)
T PF05631_consen 34 RFQRKYLLVYLLAMAADW----LQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILY 109 (354)
T ss_pred HHHHHHHHHHHHHHHHHH----hhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 334444444444444433 4555555666789999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhc-----CcchhhHHHHHHH-hhhhhHHHHHHHHHHHH
Q 009757 175 SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF-----PQTERARAVAIAM-GGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 175 ~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~-----~~~~r~~~~~~~~-~~~~~G~~ig~~l~~~l 248 (526)
+++++.. .. ++++.++++|++.|++......+-.+++..-. |++..+..++... ...++-.+++.+++.++
T Consensus 110 ~~scl~k-~~--~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 110 SLSCLTK-HS--SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHHHHHH-hc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 9998754 34 79999999999999999998888887664332 2233333333333 23334445555666666
Q ss_pred HhhcCc--hhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchH
Q 009757 249 MSQAGI--FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPT 326 (526)
Q Consensus 249 ~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (526)
.+..+. ..+|....++.++..++.....+|...+..... +..+...+.++.+++||++
T Consensus 187 ~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~--------------------~~~~~~~~a~~~i~~d~ri 246 (354)
T PF05631_consen 187 ADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSS--------------------SLSGSFREAWRAILSDPRI 246 (354)
T ss_pred HHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCccccc--------------------chHHHHHHHHHHHHcCchh
Confidence 665554 788988888777777766655555443221100 0011122355678889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHH
Q 009757 327 WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM 386 (526)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr 386 (526)
+.+.++..+.-...+.+.....+-++. +-...-.|++++.+.++.++|+.+..++..+
T Consensus 247 l~LG~~qslFE~smy~FVflWtPaL~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 247 LLLGLIQSLFEGSMYLFVFLWTPALDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHHHHHHHHHheeeeeceecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999988888887766444444442 1123457899999889999998888766543
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.68 E-value=7.5e-15 Score=144.74 Aligned_cols=378 Identities=15% Similarity=0.094 Sum_probs=226.9
Q ss_pred hcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhc-----ChHHHHHHHHHHHHHHhhhhhccc--cchHH
Q 009757 119 SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG-----GKIIMAWGVALWSLATFLTPWAAD--TSLLA 191 (526)
Q Consensus 119 ~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 191 (526)
....|.+.+++|+++++...+.+...++..+ .++.|.++|.+. ||+-++++.++.+++.+.++.... .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 4456788899999999999999999988866 667799999872 556677777777666665555421 35666
Q ss_pred HHHHHHHhhhhccchhhhhHHHHhhhcC--cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q 009757 192 LLAMRAVVGLAEGVALPAMNNMVARWFP--QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWV 269 (526)
Q Consensus 192 l~~~r~l~Gig~g~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~ 269 (526)
..++-++..+|.+....++.+++.|... ++.|+...+.......+|.+++..++|.+.+..+++..|.+.+++..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 6777788899999999999999999883 34478889999999999999999999999999999999999888877777
Q ss_pred HHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHH-HHHHHHHHHHHHHHhHH
Q 009757 270 LVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIV-ANAMHSWGFFVILSWMP 348 (526)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 348 (526)
+..++..+|.+++... +..... ++... ......++....+++.++.|.+|...+ ..++.......-....-
T Consensus 169 ~~~~~~~~e~~~~~~~-~~~~~~---~~~~~----~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~f 240 (433)
T PF03092_consen 169 IVALFLLEERKVRPAD-EVFSFG---KEEVP----CLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSF 240 (433)
T ss_pred HHHHHhhhhccccccc-hhhccc---ccccc----hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEE
Confidence 6666666652222111 000000 00000 000001122334556777777776665 22222221111101000
Q ss_pred HHHHHHhc---CCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccC------
Q 009757 349 IYFNFVYH---IDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA------ 419 (526)
Q Consensus 349 ~~~~~~~g---~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 419 (526)
.+..+..+ +++...+.+..+..++.++|..+..+...+..- |+......++.....+.-+...
T Consensus 241 y~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~--------R~~~~~t~~~~~~~~l~~~~lv~~~n~~ 312 (433)
T PF03092_consen 241 YFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSW--------RRIFVVTTLVSVLASLFDLLLVTRWNLD 312 (433)
T ss_pred EEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH--------HHHHHHHHHHHHHHhcccEEEEEEEeee
Confidence 11223344 676666666655555555554444433322222 2233333322222222111110
Q ss_pred ---chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc-------hhH
Q 009757 420 ---KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG-------SFQ 488 (526)
Q Consensus 420 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g-------~~~ 488 (526)
+..+..+.--++.-....+..........+..| ...|+.+++..++.++|..++..++..+.+..| +..
T Consensus 313 ~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~ 392 (433)
T PF03092_consen 313 LGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLW 392 (433)
T ss_pred eCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchH
Confidence 111222222233333334444445555666666 599999999999999999999999999887665 134
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCce
Q 009757 489 GFLLLTSLLYFLSALFYIIFSTGER 513 (526)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (526)
...+++.++.++.+.+..++++.++
T Consensus 393 ~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 393 LLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCch
Confidence 4455555555555555545555444
No 123
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.64 E-value=2e-15 Score=125.33 Aligned_cols=138 Identities=21% Similarity=0.367 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhc
Q 009757 139 VQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF 218 (526)
Q Consensus 139 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~ 218 (526)
+.+.+.++..++.++.|++.||+|||+.+..+..+..++.+...+. ++++.+.+.+++.|++.+...+....++.|.+
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS--SNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 3456678889999999999999999999999999999998888888 89999999999999999999999999999999
Q ss_pred CcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhccC
Q 009757 219 PQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSS 278 (526)
Q Consensus 219 ~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 278 (526)
|+++|++..++......+|..+++.+.+.+.+..+|++.+++.++..++..+..++..||
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999999998999999999888877776666665543
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.64 E-value=6.5e-15 Score=145.62 Aligned_cols=160 Identities=14% Similarity=0.083 Sum_probs=134.5
Q ss_pred cchhhhhhhcCCcc--------chhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccc--cch
Q 009757 120 VAIVPLSLAHGWSR--------SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD--TSL 189 (526)
Q Consensus 120 ~~~~~l~~~~~~s~--------~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~ 189 (526)
...+...++.|.++ +..+...++..++..++.++.|++.||+|+|+++.++.++.+++..+...... .++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 44455566666543 56799999999999999999999999999999999999999888776665311 134
Q ss_pred HHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHH-hhhhhHHHHHHHHHHHHHhh------cCchhHHHHHH
Q 009757 190 LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQ------AGIFGPFVIFG 262 (526)
Q Consensus 190 ~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~ig~~l~~~l~~~------~gw~~~f~~~~ 262 (526)
+.+++.+++.|++.+...+....++.|++|+++|+++.++.+ ...++|..+||+++|++.++ +||+..|++.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 667788999999999888999999999999999999999997 67889999999999999987 46999999998
Q ss_pred HHHHHHHHHHHhhccCC
Q 009757 263 LSGFLWVLVWLSATSST 279 (526)
Q Consensus 263 ~~~~~~~~~~~~~~~~~ 279 (526)
++.++..++.+++.+|+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 88888888777777765
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.60 E-value=9.4e-14 Score=137.29 Aligned_cols=157 Identities=18% Similarity=0.174 Sum_probs=132.6
Q ss_pred cchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHh
Q 009757 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (526)
Q Consensus 120 ~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 199 (526)
..++.+.++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+. ++.+.+++..++.
T Consensus 237 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 312 (399)
T PRK05122 237 TFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA--PSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence 344555555565 345677788889999999999999999999999999988888888887777 7888888899999
Q ss_pred hhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhccCC
Q 009757 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (526)
Q Consensus 200 Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 279 (526)
|++.+...+.....+.|.+|+++|+++.++++....+|..+++.+.+.+.+..||+..|++.+++.++..+..++..+++
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999888888888889999999999999999999999999999999999999999999998888777766666554443
Q ss_pred C
Q 009757 280 P 280 (526)
Q Consensus 280 ~ 280 (526)
+
T Consensus 393 ~ 393 (399)
T PRK05122 393 P 393 (399)
T ss_pred c
Confidence 3
No 126
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.59 E-value=2.3e-14 Score=140.42 Aligned_cols=149 Identities=15% Similarity=0.077 Sum_probs=128.2
Q ss_pred cchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHh
Q 009757 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (526)
Q Consensus 120 ~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 199 (526)
...+.+.++++.++.+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.+++.++..+....+...++...++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 34555677889999899999999999999999999999999999999999999998888877776211233455667888
Q ss_pred hhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q 009757 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLW 268 (526)
Q Consensus 200 Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~ 268 (526)
|++.+...+....++.|.+|+++|+++.++......+|..++|.+.+.+.+..||+..|++.+++.++.
T Consensus 306 g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 306 FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 888888888888999999999999999999999999999999999999999999999999888776654
No 127
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.59 E-value=1.3e-11 Score=116.84 Aligned_cols=343 Identities=13% Similarity=0.075 Sum_probs=229.5
Q ss_pred hcchhhhhhh-cCCccchhh-HHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009757 119 SVAIVPLSLA-HGWSRSFSG-IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (526)
Q Consensus 119 ~~~~~~l~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 196 (526)
+...|.+.+. .|++..|+. -+.-...-.+....++...+.|..|.|++++++.+...+...+..+. ++.+.+-+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~--~sv~~mq~~q 101 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG--TSVLAMQLMQ 101 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--CcHHHHHHHH
Confidence 3445556655 788888764 55556667778888899999999999999999999999999999898 9999999999
Q ss_pred HHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh--cCchhHHHHHHHHHHHHHHHHHh
Q 009757 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ--AGIFGPFVIFGLSGFLWVLVWLS 274 (526)
Q Consensus 197 ~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~ 274 (526)
++.|++.+. ..+..+++-...|+++-.++.+...+..-+|..++.++|..+... .+++...++......+..+..++
T Consensus 102 ~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f 180 (412)
T PF01770_consen 102 FFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF 180 (412)
T ss_pred HHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999877 778889999999999999999999999999999999999988763 34555555554444444444444
Q ss_pred hccCCCCCC---CCC-ChhHHHHHHHhc-cccccc------CCCCCCC-------CCCchHHHHHcCchHHHHHHHHHHH
Q 009757 275 ATSSTPDRH---PQI-SKYELEYILREK-QKPLLM------GNKHKPA-------TVIPPFRRLLSKMPTWSIIVANAMH 336 (526)
Q Consensus 275 ~~~~~~~~~---~~~-~~~~~~~~~~~~-~~~~~~------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (526)
.|..++.. +.. .+++.+....+. .+.... ..+..+. ..++.+++..++|.++...+-+.+.
T Consensus 181 -LP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~a 259 (412)
T PF01770_consen 181 -LPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFA 259 (412)
T ss_pred -cCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 44433221 110 000000000000 000000 0000001 1123455666789998888888888
Q ss_pred HHHHHHHHHhHHHHHHHH--hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHH
Q 009757 337 SWGFFVILSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (526)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (526)
..+++.+.+|......+. -+-....-|.+-+...+.+.++.+..|++-.++.+. ....+....+..+..++
T Consensus 260 tcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~ 332 (412)
T PF01770_consen 260 TCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLF 332 (412)
T ss_pred HhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHH
Confidence 889999988888888774 133344467788888888888889999985555544 22444445555566666
Q ss_pred hhccCchhHHHHHHHHHHHHHHhhhhhh-HHHHHHhhcccchhhHHHHHHHHHhHHHHH
Q 009757 415 GLTAAKSPVMASAWLTLAIGMKSFSHSG-FLVNLQEIAPQYSGVLHGISNTAGTFAAIL 472 (526)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~ 472 (526)
.+...++.|...+..++..+...+..+. ..-+...+..+.-|-.+|+.+.+..+-..+
T Consensus 333 lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 333 LMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence 6677778887777666555544443333 344444555577788888877665544443
No 128
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=2.3e-14 Score=142.47 Aligned_cols=150 Identities=13% Similarity=0.097 Sum_probs=130.7
Q ss_pred hcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchh
Q 009757 128 AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVAL 207 (526)
Q Consensus 128 ~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~ 207 (526)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+.++.++.+++.++.++. ++.+.+++.+++.|++.+...
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~--~~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA--TGPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHH
Confidence 346677788999999999999999999999999999999999999999988888888 889999999999999988888
Q ss_pred hhhHHHHhhhcCcchhhHHHHH-HHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhccCC
Q 009757 208 PAMNNMVARWFPQTERARAVAI-AMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (526)
Q Consensus 208 ~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 279 (526)
+....++.+.+|++.|+...+. ++....+|.++++.+.|++.+..||+..|++.+++.++..++.++..+++
T Consensus 334 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 334 VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8888999999999988887665 67778899999999999999999999999998888777666665554443
No 129
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.56 E-value=2.1e-13 Score=134.22 Aligned_cols=153 Identities=11% Similarity=0.014 Sum_probs=126.3
Q ss_pred cchhh-hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHH
Q 009757 120 VAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAV 198 (526)
Q Consensus 120 ~~~~~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 198 (526)
...|. +.+++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+......+. ++.+.+++.+++
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA--HSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHH
Confidence 34554 456789999999999888888888899999999999999998887776666555555555 677888888999
Q ss_pred hhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh
Q 009757 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (526)
Q Consensus 199 ~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 275 (526)
.+++.|...+....+..|.+| ++|+++.++++...++|..+++.+++.+.+.+||+..|++.+++.++..+..++.
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 988888777777888899987 5699999999999999999999999999999999999998887777766555543
No 130
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.56 E-value=2.1e-13 Score=133.71 Aligned_cols=153 Identities=12% Similarity=0.022 Sum_probs=134.9
Q ss_pred hhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHH
Q 009757 115 RVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (526)
Q Consensus 115 ~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 194 (526)
...+....|.+.+++|.++.++|++.+...++..+..++.|++.||+|+|+.+.++.++..+..++.++. ++.+.+++
T Consensus 221 ~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~ 298 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI--EAFPLIFL 298 (382)
T ss_pred HHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH--hhHHHHHH
Confidence 3344445566667899999999999999999999999999999999999999999999999999999888 99999999
Q ss_pred HHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHH-hhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 009757 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (526)
Q Consensus 195 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~ 271 (526)
.++++|+..+...+....++.+. |+++|++..++++ ...++|..+|+.++|++.+++|+ ..|++.+++.++..++
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 9999999999986 57789999999999999999986 6677777776655443
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.56 E-value=1.4e-13 Score=136.35 Aligned_cols=157 Identities=19% Similarity=0.133 Sum_probs=130.5
Q ss_pred hhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009757 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (526)
Q Consensus 117 ~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 196 (526)
......|.+.++.|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.+...++.++..+. ++.+.+.+..
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 315 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA--PSFAGMLLAG 315 (406)
T ss_pred HHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc--CcHHHHHHHH
Confidence 33445677788889999999999999999999999999999999999999988777777777766666 7777788888
Q ss_pred HHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHHHhh
Q 009757 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVWLSA 275 (526)
Q Consensus 197 ~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~ 275 (526)
++.|++.+...+...+++.|.+|+++|+++.++.+....+|..+||.+++.+.++.+ |...+++.+...++..+..+..
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 889998888888999999999999999999999999999999999999999988654 5556666555555544444443
No 132
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.55 E-value=2.5e-13 Score=140.59 Aligned_cols=138 Identities=17% Similarity=0.180 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhh
Q 009757 138 IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARW 217 (526)
Q Consensus 138 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~ 217 (526)
+...+..++..++.++.|+++||+|||++++++.++.+++.++.++. ++.+.+++.+++.|++.++.++...++++|+
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~--~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG--NSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556678889999999999999999999999999999999998888 7778888888999998888899999999999
Q ss_pred cCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhccCC
Q 009757 218 FPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (526)
Q Consensus 218 ~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 279 (526)
+|.++|++++|+..+...+|.++||.+++.+.+. +...+|++.+++.++..++.++ +||+
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET 736 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDT 736 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCC
Confidence 9999999999999999999999999999988764 4567788877777665555554 3554
No 133
>PRK12382 putative transporter; Provisional
Probab=99.55 E-value=3.3e-13 Score=133.06 Aligned_cols=153 Identities=18% Similarity=0.222 Sum_probs=131.2
Q ss_pred hcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHH
Q 009757 119 SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAV 198 (526)
Q Consensus 119 ~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 198 (526)
....|.+.++.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+.++..+.+++.++..+. ++.+.++++.++
T Consensus 236 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 311 (392)
T PRK12382 236 GTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA--PTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc--ccHHHHHHHHHH
Confidence 33445555666654 35666777888889999999999999999999999999998888887777 788888889999
Q ss_pred hhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh
Q 009757 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (526)
Q Consensus 199 ~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 275 (526)
.|++.+...+...+.+.+.+|+++|+++.++++....+|..+||.+.+.+.++.||+..|.+.+++.++..++.++.
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999988888888999999999999999999999999999999999999999999999999988877766665544
No 134
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.54 E-value=8.9e-13 Score=133.53 Aligned_cols=168 Identities=13% Similarity=0.117 Sum_probs=124.1
Q ss_pred hhhhhhcchhhhh-hhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhh-hhhccccchHH
Q 009757 114 DRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL-TPWAADTSLLA 191 (526)
Q Consensus 114 ~~~~~~~~~~~l~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~-~~~~~~~~~~~ 191 (526)
..+.....+|.+. +++|.+..+.++..+...++..++.++.|+++||+|||+.+.++.++..++... ......++...
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGL 344 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 3334444566655 567988888888888889999999999999999999999988887654433322 22211156777
Q ss_pred HHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CchhHHHHHHHHHHHHHH
Q 009757 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGFLWVL 270 (526)
Q Consensus 192 l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~ 270 (526)
+++++++.|++.+........++.|.+|++.|+.++++......++..++|.+.+++.+.. +|+.++++..+..++..+
T Consensus 345 ~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~ 424 (490)
T PRK10642 345 IFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLI 424 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 8889999998877777778888999999999999999855555666788899988887754 478777766666655555
Q ss_pred HHHhhccCCCCC
Q 009757 271 VWLSATSSTPDR 282 (526)
Q Consensus 271 ~~~~~~~~~~~~ 282 (526)
..+ +.||+|..
T Consensus 425 ~~~-~~pes~~~ 435 (490)
T PRK10642 425 TGV-TMKETANR 435 (490)
T ss_pred HHH-HhccccCC
Confidence 444 44777654
No 135
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.53 E-value=2.7e-13 Score=134.70 Aligned_cols=161 Identities=14% Similarity=0.064 Sum_probs=139.0
Q ss_pred hhcchhhhhhh-cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009757 118 MSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (526)
Q Consensus 118 ~~~~~~~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 196 (526)
+....|.+.++ +|.++.+.|++.+...++..++.++.|++.||.++++.+..+.++.+++.++..+. ++.+.+.++.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 319 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM--PMWILAVLCL 319 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc--chHHHHHHHH
Confidence 34456666666 89999999999999999999999999999999888888888888888888877777 7888888889
Q ss_pred HHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc
Q 009757 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (526)
Q Consensus 197 ~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 276 (526)
++.|++.+...+...+++.|..|++.|+++++++.....+|..+|+.+.+.+.+.+|++..+++.+++.++..++.....
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 99999988877888899999999999999999999999999999999999999999999999888887777666666655
Q ss_pred cCCC
Q 009757 277 SSTP 280 (526)
Q Consensus 277 ~~~~ 280 (526)
++.+
T Consensus 400 ~~~~ 403 (417)
T PRK10489 400 GELR 403 (417)
T ss_pred cccc
Confidence 5543
No 136
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.53 E-value=3.6e-13 Score=130.60 Aligned_cols=164 Identities=25% Similarity=0.329 Sum_probs=146.0
Q ss_pred HHHHhhhhhhhhcchhhhhhhc-CCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChH-HHHHHHHHHHHHHhhhhhcc
Q 009757 108 LALCNADRVVMSVAIVPLSLAH-GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI-IMAWGVALWSLATFLTPWAA 185 (526)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~ 185 (526)
.+.............|.+.++. |.++.+.++..+...++..++.++.|++.||+|||+ .+.++..+..++.+...+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 262 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA- 262 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-
Confidence 3344444455555666666665 899999999999999999999999999999999999 9999999999999998888
Q ss_pred ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 009757 186 DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSG 265 (526)
Q Consensus 186 ~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~ 265 (526)
++.+.+++..++.|++.+...+...+++.|..|+++|++.+++.+...++|..+++.+.+.+.+..+|+..+++.+++.
T Consensus 263 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~ 341 (352)
T cd06174 263 -PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALA 341 (352)
T ss_pred -ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHH
Confidence 8889999999999999999999999999999999999999999999999999999999999999899999999999888
Q ss_pred HHHHHHHH
Q 009757 266 FLWVLVWL 273 (526)
Q Consensus 266 ~~~~~~~~ 273 (526)
++..+..+
T Consensus 342 ~i~~i~~~ 349 (352)
T cd06174 342 LLAALLLL 349 (352)
T ss_pred HHHHHHhe
Confidence 77666544
No 137
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.53 E-value=1.6e-13 Score=136.21 Aligned_cols=159 Identities=17% Similarity=0.149 Sum_probs=132.3
Q ss_pred hhhcchhhhhhhcCCccc----hhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHH
Q 009757 117 VMSVAIVPLSLAHGWSRS----FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLAL 192 (526)
Q Consensus 117 ~~~~~~~~l~~~~~~s~~----~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l 192 (526)
...+.++.+..+.+.+.. ..+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+...+. ++.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 314 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV--QTPLQL 314 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh--ccHHHH
Confidence 334445555555433332 34666677788888999999999999999999999988888887777777 788888
Q ss_pred HHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHH
Q 009757 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVW 272 (526)
Q Consensus 193 ~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 272 (526)
++.+++.|++.+...+...+++.+..|+++|++.++++.....+|..+||.+++.+.+..||+..|++.+++.++..+..
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999998888777666
Q ss_pred Hhhcc
Q 009757 273 LSATS 277 (526)
Q Consensus 273 ~~~~~ 277 (526)
++..+
T Consensus 395 ~~~~~ 399 (408)
T PRK09874 395 WNSLR 399 (408)
T ss_pred HHHHH
Confidence 55443
No 138
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.52 E-value=6.7e-13 Score=130.09 Aligned_cols=147 Identities=13% Similarity=0.053 Sum_probs=125.6
Q ss_pred hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhcc
Q 009757 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEG 204 (526)
Q Consensus 125 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g 204 (526)
+.+++|.++.+.+++.+...+...++.++.|++.||+|||+.+.++.++..+......+. ++.+.+++.+++.|++.+
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~g 303 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD--NSLWALLMLQLLNAIFIG 303 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 456789999999999888887888889999999999999999988877766666655566 778888888999999999
Q ss_pred chhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHh
Q 009757 205 VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (526)
Q Consensus 205 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 274 (526)
...+....++.|..|+ +++++.+++....++|..++|.+++.+.+..||+..|++.+++.++..+...+
T Consensus 304 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 304 ILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 8888888999999874 66799999999999999999999999999999999999988877766655443
No 139
>PRK10054 putative transporter; Provisional
Probab=99.51 E-value=1.2e-12 Score=128.69 Aligned_cols=173 Identities=12% Similarity=0.126 Sum_probs=127.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHH
Q 009757 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (526)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (526)
+.++.+.+..++...+......++|.|+++.+|++..+.++..+...++..++.++.|+++||+++|+ .+.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~---------~~~ 77 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKR---------YML 77 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch---------hHH
Confidence 44667777888888888889999999998889999999999999999999999999999999999982 233
Q ss_pred HHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcc
Q 009757 404 IGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (526)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~ 482 (526)
.+.+...+..+.+...++.+..+....+.........+....+..+..| ++|+++.|+.+...++|..++|.+.+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 78 LAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444555444433333222223334445566566655 789999999999999999999999999885
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHH
Q 009757 483 LVGSFQGFLLLTSLLYFLSALFYII 507 (526)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (526)
.| ++..|.+.+++.+++.+....
T Consensus 158 -~g-~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 158 -QS-INLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred -hc-cCcHHHHHHHHHHHHHHHHHH
Confidence 45 788888877777666544433
No 140
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.51 E-value=1.5e-12 Score=127.78 Aligned_cols=150 Identities=15% Similarity=0.166 Sum_probs=124.8
Q ss_pred cchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHh
Q 009757 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (526)
Q Consensus 120 ~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 199 (526)
..+|.+.++.|.++.+.|++.+...++..+++++.|++.||+|+|+.+..+..+..++.+... . ........++.
T Consensus 221 ~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~----~~~~~~~~~l~ 295 (381)
T PRK03633 221 GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-S----QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-h----hHHHHHHHHHH
Confidence 346777778899999999999999999999999999999999999999888888777665432 1 12334566778
Q ss_pred hhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHh
Q 009757 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (526)
Q Consensus 200 Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 274 (526)
|++.....|...+.+.|..|+++++...+......++|..+||.+++++.++.||++.|.+.+.+.++..+..++
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 887777789999999999988888888888888999999999999999999999999999988877765554443
No 141
>PRK03545 putative arabinose transporter; Provisional
Probab=99.50 E-value=1.6e-12 Score=128.00 Aligned_cols=152 Identities=17% Similarity=0.100 Sum_probs=125.3
Q ss_pred hhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh-hhhhccccchHHHHHHHHHhh
Q 009757 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LTPWAADTSLLALLAMRAVVG 200 (526)
Q Consensus 122 ~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~~r~l~G 200 (526)
.|.+.+++|.+..+.+++.+...++..++.++.|++.||+|+|+.. .+..+..++.. +.... ++.+.++++.++.|
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~--~~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA--NSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh--chHHHHHHHHHHHH
Confidence 3445566899999999999999999999999999999999988754 44444444433 33445 67888888999999
Q ss_pred hhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc
Q 009757 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATS 277 (526)
Q Consensus 201 ig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 277 (526)
++.+...+...+.+.+..| ++|++++++++....+|..+||+++|.+.+++|++..|++.+++.++..+...+..+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9988777778888888876 688999999999999999999999999999999999999999888877776666554
No 142
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.49 E-value=2.3e-12 Score=126.70 Aligned_cols=164 Identities=15% Similarity=0.099 Sum_probs=129.4
Q ss_pred hhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHH
Q 009757 115 RVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (526)
Q Consensus 115 ~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 194 (526)
........|.+.+++|.+..+.|.+.+.+.++..++.++.|++.||+|||+.+.++..+..++.++..... ++...+.
T Consensus 221 ~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~- 298 (393)
T PRK09705 221 YASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP-LQLPVLW- 298 (393)
T ss_pred HHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc-chHHHHH-
Confidence 33444556676777899999999999999999999999999999999999999998888777776554431 2222222
Q ss_pred HHHHhhhhccchhhhhHHHHhhhcC-cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHH
Q 009757 195 MRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVW 272 (526)
Q Consensus 195 ~r~l~Gig~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~ 272 (526)
-++.|++.+...+.......+..+ ++++++..++.+....++..++|.+.+++.+..| |...|++.++..++..+..
T Consensus 299 -~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK09705 299 -AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIIT 377 (393)
T ss_pred -HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 345688888888877777777775 5789999999999999999999999999999876 7888888887777766666
Q ss_pred HhhccCCCC
Q 009757 273 LSATSSTPD 281 (526)
Q Consensus 273 ~~~~~~~~~ 281 (526)
..+.||++.
T Consensus 378 ~~~~~~~~~ 386 (393)
T PRK09705 378 LRFAPARFP 386 (393)
T ss_pred HHhcccccc
Confidence 666666544
No 143
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.49 E-value=9e-13 Score=132.80 Aligned_cols=174 Identities=17% Similarity=0.078 Sum_probs=127.3
Q ss_pred HHHHHHHHHHhhhhhhhhcchhhh-hhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhh
Q 009757 102 SMLALALALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 180 (526)
..+++..++.+..........|.+ .+++|.+..+.++..+...++..++.+++|+++||+|||+.+.....+..++..+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~ 340 (467)
T PRK09556 261 WLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTL 340 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHH
Confidence 334444444444444455556654 4678999999999999999999999999999999999998776655444443322
Q ss_pred hhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhh-HHHHHHHHHHHHHh---------
Q 009757 181 TPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMS--------- 250 (526)
Q Consensus 181 ~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~ig~~l~~~l~~--------- 250 (526)
..+...++.+.+.+.+++.|++...........+.|.+|++.|+.+.|+.+...++ |..++|.+.|.+.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~ 420 (467)
T PRK09556 341 GVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIF 420 (467)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccc
Confidence 22221156667778888888654443434446777999999999999999998886 77999999999999
Q ss_pred ---hcCchhHHHHHHHHHHHHHHHHHhh
Q 009757 251 ---QAGIFGPFVIFGLSGFLWVLVWLSA 275 (526)
Q Consensus 251 ---~~gw~~~f~~~~~~~~~~~~~~~~~ 275 (526)
..||+..|++.++..++..+..++.
T Consensus 421 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 421 GYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred cccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999877777665554433
No 144
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.48 E-value=5.9e-13 Score=135.62 Aligned_cols=150 Identities=12% Similarity=0.108 Sum_probs=118.2
Q ss_pred hhcchhhhh-hhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009757 118 MSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (526)
Q Consensus 118 ~~~~~~~l~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 196 (526)
....+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++.++.++..++.++.......+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 345567766 5889999999999999999999999999999999999999988877766665544333223444454555
Q ss_pred HHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 009757 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (526)
Q Consensus 197 ~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 267 (526)
++.+.......+....++.|.+|+++|++++++......+|..+||.+++.+.+.+||+..+...+....+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 55544433445677788999999999999999999999999999999999999999999888665544433
No 145
>PRK03699 putative transporter; Provisional
Probab=99.48 E-value=1.4e-12 Score=128.48 Aligned_cols=156 Identities=12% Similarity=0.094 Sum_probs=129.0
Q ss_pred hhhhcchhhhh-hhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHH
Q 009757 116 VVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (526)
Q Consensus 116 ~~~~~~~~~l~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 194 (526)
..+....|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+++|+.+.....+..+...+.... ++.+.+.+
T Consensus 222 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~ 299 (394)
T PRK03699 222 LTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT--DDPSHLLY 299 (394)
T ss_pred HHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc--CCchHHHH
Confidence 34445566666 5689999999999999999999999999999999999999988887777766666666 67777777
Q ss_pred HHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHh
Q 009757 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (526)
Q Consensus 195 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 274 (526)
..++.|++.+..++...++..+..| +++++..+.......+|..++|.+.+++.+..||+..+++.+++.++..+....
T Consensus 300 ~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 300 AILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 7888999888888888888888775 556788888888999999999999999999999999999888777766554443
No 146
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.48 E-value=1.5e-12 Score=128.44 Aligned_cols=165 Identities=18% Similarity=0.110 Sum_probs=119.6
Q ss_pred HHHHHHhhhhhhhhcchhhhh-hhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChH--HHH------HHHHHHHH
Q 009757 106 LALALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKI--IMA------WGVALWSL 176 (526)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~--~l~------~~~~~~~~ 176 (526)
+..+.............|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+ ... .+.++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
T TIGR00893 222 LGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSL 301 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Confidence 333444444445555556554 568999999999999999999999999999999999996 111 11111111
Q ss_pred HHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-ch
Q 009757 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IF 255 (526)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g-w~ 255 (526)
........ ++.+..+...++.+.+.+ ..+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..| |+
T Consensus 302 ~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~ 378 (399)
T TIGR00893 302 LMFATNYV--NIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFA 378 (399)
T ss_pred HHHHhccc--hhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchh
Confidence 11122222 344444444455555544 788999999999999999999999999999999999999999999888 99
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 009757 256 GPFVIFGLSGFLWVLVWL 273 (526)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~ 273 (526)
..|++.++..++..+..+
T Consensus 379 ~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 379 GALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999988887776655544
No 147
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.47 E-value=6e-13 Score=133.27 Aligned_cols=152 Identities=14% Similarity=0.061 Sum_probs=125.2
Q ss_pred hhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh--cChHHHHH--HHHHHHHHHhhhhhccccchHHH
Q 009757 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIMAW--GVALWSLATFLTPWAADTSLLAL 192 (526)
Q Consensus 117 ~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~l 192 (526)
.....+|.+.+++|.+..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.+++.+. ++++.+
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~--~~~~~~ 336 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA--GDYTGL 336 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh--chHHHH
Confidence 444456667778899999999999999999999999999999984 34443333 334444445555566 788889
Q ss_pred HHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CchhHHHHHHHHHHHHHH
Q 009757 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA-GIFGPFVIFGLSGFLWVL 270 (526)
Q Consensus 193 ~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~ 270 (526)
++.+++.|++.+...+...+++.|.+|++++++.+++++...++|..+||.+++.+.+.. +|+..|++.+++.++..+
T Consensus 337 ~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 337 VIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998877 599999998877665544
No 148
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.46 E-value=6.7e-13 Score=130.92 Aligned_cols=161 Identities=12% Similarity=0.097 Sum_probs=123.3
Q ss_pred HHHHHHhhhhhhhhcchhhhh-hhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHH--hhhh
Q 009757 106 LALALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT--FLTP 182 (526)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~--~~~~ 182 (526)
...+.............|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.. ++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 305 (394)
T TIGR00883 226 GLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA 305 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444555566665 6789999999999999999999999999999999999998776554444333 2222
Q ss_pred hccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHH-HHhhhhhHHHHHHHHHHHHHhhcC-chhHHHH
Q 009757 183 WAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAI-AMGGFTSGNAIGLVLSPILMSQAG-IFGPFVI 260 (526)
Q Consensus 183 ~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~ig~~l~~~l~~~~g-w~~~f~~ 260 (526)
+...++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++ ......+|..++|.+++++.++.| |+..++.
T Consensus 306 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 306 LLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYY 385 (394)
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHH
Confidence 22124667777888899999888899999999999999999999998 456667899999999999999888 8887776
Q ss_pred HHHHHH
Q 009757 261 FGLSGF 266 (526)
Q Consensus 261 ~~~~~~ 266 (526)
.++..+
T Consensus 386 ~~~~~l 391 (394)
T TIGR00883 386 LAALAL 391 (394)
T ss_pred HHHHHH
Confidence 665443
No 149
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.46 E-value=2.3e-12 Score=130.74 Aligned_cols=182 Identities=17% Similarity=0.112 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHH
Q 009757 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (526)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 178 (526)
..+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33444444444444444455556788888899999888999999999999999999999999999999999988888877
Q ss_pred hhhhh---cccc------chHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHH
Q 009757 179 FLTPW---AADT------SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (526)
Q Consensus 179 ~~~~~---~~~~------~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 249 (526)
++.++ ...+ +...+....++.+.......+....++.|.+|+++|++++++.....++|.++++.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76652 1112 22233333333333223334666778899999999999999999999999999999999999
Q ss_pred hhcCchhHHHHHHHHHHHHHHHHHhhccCCC
Q 009757 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (526)
Q Consensus 250 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (526)
++.+|++.|++.++++++..++.+++.||++
T Consensus 444 ~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 444 ESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 9899999999998888887777766665543
No 150
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.45 E-value=4e-12 Score=125.61 Aligned_cols=165 Identities=12% Similarity=0.089 Sum_probs=126.0
Q ss_pred HHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHH-HHHHHHHHHHhhhhhc---
Q 009757 109 ALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA-WGVALWSLATFLTPWA--- 184 (526)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~--- 184 (526)
++............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.+.+.
T Consensus 232 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~ 311 (402)
T TIGR00897 232 IINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH 311 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 333333444555678888889999999999999999999999999999999999988764 3333333333332221
Q ss_pred cccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 009757 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (526)
Q Consensus 185 ~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~ 264 (526)
..++.+.+++..++.|++.+...+ ....+.+.. +++|+++.|+.+....+|..++|.+++.+.+..||+..+++.+++
T Consensus 312 ~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~ 389 (402)
T TIGR00897 312 FGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL 389 (402)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 114667777888899998887554 455667765 468999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhh
Q 009757 265 GFLWVLVWLSA 275 (526)
Q Consensus 265 ~~~~~~~~~~~ 275 (526)
.++..++..+.
T Consensus 390 ~~i~~~~~~~~ 400 (402)
T TIGR00897 390 YVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHh
Confidence 77766655543
No 151
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.44 E-value=1.7e-11 Score=117.06 Aligned_cols=182 Identities=10% Similarity=0.071 Sum_probs=141.3
Q ss_pred hHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccc
Q 009757 316 PFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVT 395 (526)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~ 395 (526)
...+++.+++...+.+...+..++...+.+++=-++++ ++..+..-|........+.++.-++.+++.+|+|+-
T Consensus 363 ~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv----- 436 (618)
T KOG3762|consen 363 DVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV----- 436 (618)
T ss_pred HHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc-----
Confidence 34467788887777777777777777788888778888 576777778777777778888889999999999987
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHh-HHHHHH
Q 009757 396 LTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGT-FAAILG 473 (526)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~-lg~~~~ 473 (526)
-++..++.+...-++.+....++|..+..=++-....+..+....++++...| +.++++.|+...... +|-.+|
T Consensus 437 ----~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~G 512 (618)
T KOG3762|consen 437 ----NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLG 512 (618)
T ss_pred ----ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchh
Confidence 34556667777777777777888888877777777777777777778777766 799999999877664 899999
Q ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 474 TVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 474 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
.+++|.+.+.+| -...|..+++.+++.+++...+
T Consensus 513 slIGG~~v~~fg-~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 513 SLIGGFVVERFG-ARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hhhhhhhheeeh-hHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998 6777777777666666555554
No 152
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.44 E-value=6.3e-12 Score=125.38 Aligned_cols=170 Identities=14% Similarity=-0.051 Sum_probs=115.4
Q ss_pred HHHhhhhhhhhcchhhhh-hhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh--cChHHH-HHHHHHHHHHHhhhhhc
Q 009757 109 ALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIM-AWGVALWSLATFLTPWA 184 (526)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~~ 184 (526)
+........+....|.+. +++|.+..+.++..+.+.++..++.++.|+++||+ ++|+.. ....+...+........
T Consensus 253 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~ 332 (434)
T PRK11663 253 VLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM 332 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHc
Confidence 333333334444556555 67899999999999999999999999999999999 333322 22111111111111111
Q ss_pred cccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 009757 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (526)
Q Consensus 185 ~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~ 264 (526)
...+...+.+..+..|++...........+.|.+|+++|+.+.|+.+....+|..++|.+.+++.+..||+..|++.+++
T Consensus 333 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~ 412 (434)
T PRK11663 333 PFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIA 412 (434)
T ss_pred ccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHH
Confidence 11333344444445555433223334456789999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhhccC
Q 009757 265 GFLWVLVWLSATSS 278 (526)
Q Consensus 265 ~~~~~~~~~~~~~~ 278 (526)
.++..+..++..++
T Consensus 413 ~~~~~~~~~~~~~~ 426 (434)
T PRK11663 413 AGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHhh
Confidence 87776666554433
No 153
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.43 E-value=6.7e-12 Score=126.01 Aligned_cols=174 Identities=10% Similarity=0.047 Sum_probs=129.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHH--hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHH-HHhhcCccchhHHHH
Q 009757 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFV--YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKIL 401 (526)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~~~~~~ 401 (526)
.++.+.+..++..++++++..++|.|+++. +|++..+++.+.+...++..++.+++|+++|| +||| ..
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~---------~~ 81 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK---------KT 81 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH---------HH
Confidence 355666677777889999999999999987 89999999999999999999999999999999 7988 33
Q ss_pred HHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-c---chhhHHHHHHHHHhHHHHHHHHHH
Q 009757 402 QSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-Q---YSGVLHGISNTAGTFAAILGTVGA 477 (526)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~g~~~g~~~~~~~lg~~~~~~~~ 477 (526)
+..+.++.+++.+.+...++.+.......+.....+...+.......+..| + +|+++.++.+...++|..+||.+.
T Consensus 82 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~ 161 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLA 161 (475)
T ss_pred HHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHH
Confidence 444555555555555444444433333333222233444556666666665 2 388899999999999999999999
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 478 GFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 478 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
|++.+..| |+..|...++..+++.+.+...
T Consensus 162 g~l~~~~g-~~~~f~~~~~~~~~~~l~~~~~ 191 (475)
T TIGR00924 162 GVIAENYG-YHVGFNLAAVGMVIGLLTFFAG 191 (475)
T ss_pred HHHHHhcC-hHHHHHHHHHHHHHHHHHHHHc
Confidence 99999887 8889888777666665554443
No 154
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.43 E-value=8.9e-12 Score=122.25 Aligned_cols=146 Identities=19% Similarity=0.073 Sum_probs=123.8
Q ss_pred cchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHh
Q 009757 120 VAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVV 199 (526)
Q Consensus 120 ~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 199 (526)
...|.+.++.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+.++.++.+++.++.++. ++.+.+++..++.
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 303 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST--TALPWLIVIQILH 303 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHH
Confidence 34455657789999999999999999999999999999999999999999999999988888877 8999999999999
Q ss_pred hhhccchhhhhHHHHhhhcCcchhhHHHHHHH-hhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q 009757 200 GLAEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWV 269 (526)
Q Consensus 200 Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~ 269 (526)
|++.+...+....++.+. +++++++..+++. ...++|..+||.++|.+.+.+|+ ..|+..+++.++.+
T Consensus 304 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 304 CGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 999998899999998887 5667788888876 55678889999999999999887 46666666555443
No 155
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.42 E-value=1.3e-10 Score=117.35 Aligned_cols=154 Identities=14% Similarity=0.059 Sum_probs=121.6
Q ss_pred hhhhhhhcCCccchhhHHHH-HHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhh---hhccccchHHHHHHHH
Q 009757 122 IVPLSLAHGWSRSFSGIVQS-SFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLALLAMRA 197 (526)
Q Consensus 122 ~~~l~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~l~~~r~ 197 (526)
.|.+.+++|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.+++ +.. .++.+.+.+.-+
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~-~~~~~~l~~~~~ 324 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT-DKNLYSMGAAVF 324 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHH
Confidence 44556778999999999974 6678999999999999999999998877666555544332 222 135555555666
Q ss_pred HhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc
Q 009757 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (526)
Q Consensus 198 l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 276 (526)
++.++.|...+...++..+..+++.+++..++.+...++|..+++.+.|.+.+..||+..|.+.++++++..+...+.+
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666777888999999999999999999999999999999999999999999999998888887766665553
No 156
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=5.3e-12 Score=126.66 Aligned_cols=160 Identities=11% Similarity=0.011 Sum_probs=112.6
Q ss_pred hhhhcchhhhhhh-cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh--cChHHH-HHHHHHHHHHHhhhhhccccchHH
Q 009757 116 VVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY--GGKIIM-AWGVALWSLATFLTPWAADTSLLA 191 (526)
Q Consensus 116 ~~~~~~~~~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~ 191 (526)
......+|.+.++ .|.+..+.+++...+.++..++.+++|+++||+ |||+.. .....+..++.++..+....+.+.
T Consensus 270 ~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 349 (452)
T PRK11273 270 YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTV 349 (452)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHH
Confidence 3445566776654 789999999999999999999999999999999 555432 222333333333322221134455
Q ss_pred HHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHH-HHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 009757 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAI-GLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (526)
Q Consensus 192 l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i-g~~l~~~l~~~~gw~~~f~~~~~~~~~~~~ 270 (526)
.+++.++.|.+..........++.|.+|+++|+++.|+.+....+|..+ +|.+.+.+.++.||+..|++.++.+++.++
T Consensus 350 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~ 429 (452)
T PRK11273 350 DMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVI 429 (452)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 5555555565433333344456789999999999999999888887654 799999999999999999988887777666
Q ss_pred HHHhh
Q 009757 271 VWLSA 275 (526)
Q Consensus 271 ~~~~~ 275 (526)
....+
T Consensus 430 ~~~~~ 434 (452)
T PRK11273 430 LLIVV 434 (452)
T ss_pred HHHHH
Confidence 55544
No 157
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.5e-11 Score=115.99 Aligned_cols=164 Identities=20% Similarity=0.212 Sum_probs=135.9
Q ss_pred HHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccch
Q 009757 110 LCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSL 189 (526)
Q Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 189 (526)
........+...-|.+.+..|.+.+.++++.-+|.++..+++.+.|+++|| +.|+.+.....+.++..+.+.+.. ++.
T Consensus 223 ~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~-~~~ 300 (394)
T COG2814 223 FMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG-ASP 300 (394)
T ss_pred HHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc-chH
Confidence 333444566667788888899999999999999999999999999999999 999999988888877777665552 556
Q ss_pred HHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q 009757 190 LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWV 269 (526)
Q Consensus 190 ~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~ 269 (526)
+..++.-++.|++.+.........+++ .-++.++.+.+++....++|..+|..++|.+.+++|+....++.+++.++..
T Consensus 301 ~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~ 379 (394)
T COG2814 301 ALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLAL 379 (394)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Confidence 667777777888777766666666666 3368999999999999999999999999999999999999999999888877
Q ss_pred HHHHhhc
Q 009757 270 LVWLSAT 276 (526)
Q Consensus 270 ~~~~~~~ 276 (526)
++.+...
T Consensus 380 ~~~~~~~ 386 (394)
T COG2814 380 LLALLSA 386 (394)
T ss_pred HHHHHHH
Confidence 7665543
No 158
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.41 E-value=2e-11 Score=120.34 Aligned_cols=169 Identities=14% Similarity=0.178 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHH
Q 009757 327 WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF 406 (526)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 406 (526)
+.+....++...+.+.+..+++.|+++.+|++..+.|+..+...+...+..++.|+++||+++| ..+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k---------~~l~~~~ 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK---------PMIVTGM 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch---------HHHHHHH
Confidence 4555777777888888899999999888999999999999999999999999999999999988 3344444
Q ss_pred HHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc
Q 009757 407 IAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g 485 (526)
....+..+.....++.+......++.....+...+.......+..| ++|+++.|+.+...++|..+||.+.|++. ..|
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g 162 (400)
T PRK11646 84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD 162 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 4444444444444555544444333333334444555566666654 79999999999999999999999999998 455
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 009757 486 SFQGFLLLTSLLYFLSALFYI 506 (526)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~ 506 (526)
++..|++.+++.++..++..
T Consensus 163 -~~~~f~~~~~~~~~~~i~~~ 182 (400)
T PRK11646 163 -FRLVCATGAVLFVLAAAFNA 182 (400)
T ss_pred -HHHHHHHHHHHHHHHHHHHH
Confidence 88888887766665554433
No 159
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.40 E-value=3.3e-12 Score=126.60 Aligned_cols=138 Identities=13% Similarity=0.083 Sum_probs=115.2
Q ss_pred chhh-hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh-hhhhccccchHHHHHHHHH
Q 009757 121 AIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LTPWAADTSLLALLAMRAV 198 (526)
Q Consensus 121 ~~~~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~~r~l 198 (526)
..|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++..+... +.... ++.+.+.+..++
T Consensus 260 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 337 (405)
T TIGR00891 260 LLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG--ANVAVLGLGLFF 337 (405)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC--CchHHHHHHHHH
Confidence 3444 4567899999999999999999999999999999999999998888776543333 33333 566777777788
Q ss_pred hhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-chhHHHH
Q 009757 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVI 260 (526)
Q Consensus 199 ~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g-w~~~f~~ 260 (526)
.|++.+...+....++.|.+|+++|++++|+.+....+|..++|++++.+.++.| |+..+..
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 338 QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 8877777788888999999999999999999999999999999999999999888 8776654
No 160
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.40 E-value=6.7e-12 Score=125.25 Aligned_cols=143 Identities=13% Similarity=0.080 Sum_probs=108.2
Q ss_pred hhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHH
Q 009757 118 MSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (526)
Q Consensus 118 ~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 197 (526)
+...+|.+.++.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.++..++.+.......++...+.+..+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 34456777777899999999999999999999999999999999999999988877776655544331122322222222
Q ss_pred HhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHH
Q 009757 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVI 260 (526)
Q Consensus 198 l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~ 260 (526)
..+.+..+..+....++.|.+|+++|++++|+......+|..++|.+.+++.++.|+....++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 233333334456677889999999999999999999999999999999999998886654333
No 161
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=4.7e-12 Score=117.85 Aligned_cols=176 Identities=16% Similarity=0.141 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHH
Q 009757 326 TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (526)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (526)
+....+.+..+++.--.+..-.|...++ .|+|..+.|.+.+.+.+...++..+.|.++||.+.| ..+..+
T Consensus 31 f~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr---------~fm~~g 100 (448)
T COG2271 31 FLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR---------YFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc---------eeehHH
Confidence 4444555555666666666667766666 789999999999999999999999999999999988 567788
Q ss_pred HHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHH--hhhcc
Q 009757 406 FIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGA--GFFVE 482 (526)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~--g~l~~ 482 (526)
+++.++..+++.+.++.+.+.++..+...+.+.+.+.....+....+ ++||+..++-|+..++|+.+.|++. +++.+
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~ 180 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF 180 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh
Confidence 88888888888888888888878888777888888888777777777 6999999999999999999999999 88888
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhcCc
Q 009757 483 LVGSFQGFLLLTSLLYFLSALFYIIFSTGE 512 (526)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (526)
+.+ ++..|++.++++++..++.+...+++
T Consensus 181 ~~~-w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 181 HGG-WRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred ccc-hhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 875 99999999988887777666654443
No 162
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.40 E-value=2.1e-11 Score=120.59 Aligned_cols=174 Identities=16% Similarity=0.196 Sum_probs=125.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHH-HhhcCccchhHHHHH
Q 009757 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML-IQRGTSVTLTRKILQ 402 (526)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-~~~~~~~~~~~~~~~ 402 (526)
+.++.++...+...+.++++..++|.|+++.+|++..+++.+...+.....++.+++|+++||+ ||| ..+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr---------r~i 79 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR---------MAV 79 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH---------HHH
Confidence 3466667777777889999999999999988999999999999999999999999999999999 888 233
Q ss_pred HHHHHHHHHHHHhhccCc-hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-c--chhhHHHHHHHHHhHHHHHHHHHHh
Q 009757 403 SIGFIAPGIALIGLTAAK-SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-Q--YSGVLHGISNTAGTFAAILGTVGAG 478 (526)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~g~~~g~~~~~~~lg~~~~~~~~g 478 (526)
..+.+...++.+.+.... ........+.+.....+...+....+..+..| + +|+++.++.+...++|+.++|.+.|
T Consensus 80 liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g 159 (493)
T PRK15462 80 MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACG 159 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHH
Confidence 344444443333332211 11212222222212223333555667778776 3 6999999999999999999999999
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHHHH
Q 009757 479 FFVELVGSFQGFLLLTSLLYFLSALFYII 507 (526)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (526)
++.+..| |+..|..+++..+++++.++.
T Consensus 160 ~L~~~~G-w~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 160 YAQEEYS-WAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHhhhC-hHHHHHHHHHHHHHHHHHHHH
Confidence 9999887 888888877766666655544
No 163
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.40 E-value=9.4e-09 Score=100.81 Aligned_cols=275 Identities=11% Similarity=-0.028 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCC-----ccchhhHHHHHHHHHHHHh-hhhhhHHHhHhcChHHHHHHHH
Q 009757 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGW-----SRSFSGIVQSSFLWGYLVS-PIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----s~~~~g~~~s~~~~~~~~~-~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
+.+..+.+..|+..+..+..- ++.+.+.+ ..+.+.++-+...+...+. .++.+++++|++|++++-+...
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR----~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILR----DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 344445555555555444443 34555444 4468899999888887777 8899999999999999888777
Q ss_pred HHHHHHhhhhhcccc-----------------------------chHHHHHHHHHhhhhccchhh-hhHHHHhhhcCcch
Q 009757 173 LWSLATFLTPWAADT-----------------------------SLLALLAMRAVVGLAEGVALP-AMNNMVARWFPQTE 222 (526)
Q Consensus 173 ~~~~~~~~~~~~~~~-----------------------------~~~~l~~~r~l~Gig~g~~~~-~~~~~i~~~~~~~~ 222 (526)
.+....+++++..-+ +.|...+..+...+-...... .-.++++|.+..+|
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 777766665554100 123333444444454444444 67889999999999
Q ss_pred hhHHHHHHHhhhhhHHHHHHHHHHHHHhh--------cCch----hHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhH
Q 009757 223 RARAVAIAMGGFTSGNAIGLVLSPILMSQ--------AGIF----GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYE 290 (526)
Q Consensus 223 r~~~~~~~~~~~~~G~~ig~~l~~~l~~~--------~gw~----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (526)
-.|..+++..+.++|.++++.+..++.+. ..|. ..+.+.++..++...+...+.+.. ...+...+.+
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~ 241 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNV-LTDPRSYNPA 241 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCccccchh
Confidence 99999999999999999999998887631 1242 233333333333333333332222 1111111111
Q ss_pred HHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcch----hhhHh
Q 009757 291 LEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFS 366 (526)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~ 366 (526)
. ..++++++....++++.++++|.++.+.+...++....+.+....-..+++.+ -++.+ .|.+.
T Consensus 242 ~-----------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g~~~ 309 (472)
T TIGR00769 242 L-----------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMGDFS 309 (472)
T ss_pred h-----------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH
Confidence 0 00222234455678889999999888888888887777777665666666644 23322 23334
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhh
Q 009757 367 AVPWSVMAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 367 ~~~~~~~~i~~~~~g~l~dr~~~~ 390 (526)
...++..++..++.+++.+|+|-+
T Consensus 310 ~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 310 TWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHH
Confidence 444555555666668888888876
No 164
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.39 E-value=1.4e-11 Score=119.46 Aligned_cols=164 Identities=20% Similarity=0.250 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHH
Q 009757 331 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPG 410 (526)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 410 (526)
+..++...........+|.++.+.+|.+..+.+++.+...++..++.++.|++.||+|+| ..+..+.++.+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~l~~~~~~~~ 73 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR---------RVLIIGLLLFA 73 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH---------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe---------eeEeehhhhhh
Confidence 455566666666777778566666899999999999999999999999999999999998 23344444444
Q ss_pred HHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHH
Q 009757 411 IALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQG 489 (526)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~ 489 (526)
+..+.....++.+..+...++.....+...+....+..+..| ++|+++.|+.+....+|..++|.+.+.+.+..| ++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~ 152 (352)
T PF07690_consen 74 LGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRW 152 (352)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCC
T ss_pred hHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-ccc
Confidence 442222222444444444444444445666777777788777 599999999999999999999999999998877 888
Q ss_pred HHHHHHHHHHHHHHH
Q 009757 490 FLLLTSLLYFLSALF 504 (526)
Q Consensus 490 ~~~~~~~~~~~~~~~ 504 (526)
.|++.+++.+++.++
T Consensus 153 ~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 153 AFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhh
Confidence 888888888777664
No 165
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.38 E-value=2.4e-11 Score=118.46 Aligned_cols=170 Identities=12% Similarity=0.101 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 009757 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (526)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (526)
.+.+..++...+.......+|.|..+ .+.+..+.+++.+...++..++.++.|++.||+|||+ .+..+.+
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~---------~~~~~~~ 72 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKK---------VMIGADL 72 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhH---------HHHHHHH
Confidence 34556666667777777888888888 7999999999999999999999999999999999982 2222222
Q ss_pred HHHHHHHhhccCc-----hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhc
Q 009757 408 APGIALIGLTAAK-----SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (526)
Q Consensus 408 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~ 481 (526)
+..+......... +.+...+..++.....+...+....+..+..| ++|+++.|+.+....+|..++|.+.+.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 73 IRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222211111 44544444444444455556667777777776 69999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 482 ELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 482 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
+..| ++..+++.++..+++.+.....
T Consensus 153 ~~~g-~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 153 ATLG-IKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHhh-HHHHHHHHHHHHHHHHHHHHhc
Confidence 8887 8888877776666555544443
No 166
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.37 E-value=2.4e-11 Score=121.76 Aligned_cols=154 Identities=21% Similarity=0.209 Sum_probs=138.3
Q ss_pred hhcchhhhhh-hcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHH
Q 009757 118 MSVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMR 196 (526)
Q Consensus 118 ~~~~~~~l~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 196 (526)
+...+|.+.+ ++|.++...|++.+++.+|..++++..+++.+|+++++.+..+.++.+++.+..++. ++.+..++..
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~--~~~~~~~~~l 314 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS--PSFWLALIAL 314 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc--hHHHHHHHHH
Confidence 3445677664 589999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred HHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q 009757 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (526)
Q Consensus 197 ~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 273 (526)
++.|++.....+...+.+.+..|++.|||.++++.+....+..+|..+.|.+.+.+|.+..+.+.++..++..++.+
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988999999999999999999999999999999999999999999999999998887776555554443
No 167
>PRK10504 putative transporter; Provisional
Probab=99.37 E-value=6.2e-11 Score=119.88 Aligned_cols=174 Identities=11% Similarity=0.045 Sum_probs=126.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHH
Q 009757 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (526)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (526)
+.+|.+.+..++.......+..++|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+ ...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~---------~~~ 79 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRN---------IFF 79 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH---------HHH
Confidence 356777777888777888888999999987 8999999999999989999999999999999999982 222
Q ss_pred HHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcc
Q 009757 404 IGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (526)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~ 482 (526)
.+..+.++..+.....++.+..+...++.+...+...+.......+..| ++++++.|+.+....+|..++|.+.|.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~ 159 (471)
T PRK10504 80 TAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE 159 (471)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 3333333333333333444444444333333333444555666666666 689999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 483 LVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
..| |+..|.+...+..++.+.....
T Consensus 160 ~~g-w~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 160 YAS-WHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred hcc-HHHHHHHHHHHHHHHHHHHHHh
Confidence 887 8888888776666555554444
No 168
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.36 E-value=7.1e-11 Score=119.36 Aligned_cols=179 Identities=8% Similarity=0.058 Sum_probs=124.5
Q ss_pred HHHcCch-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHH-HHhhcCccch
Q 009757 319 RLLSKMP-TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTL 396 (526)
Q Consensus 319 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~ 396 (526)
+.+++|+ ++..++..++..++++.+..+++.|+++.+|++..+++..............+++|++.|| +|+|
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r------ 88 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK------ 88 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH------
Confidence 4556764 7788888888889999999999999988899999988888777665555556789999999 5988
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCc-hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhccc---chhhHHHHHHHHHhHHHHH
Q 009757 397 TRKILQSIGFIAPGIALIGLTAAK-SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ---YSGVLHGISNTAGTFAAIL 472 (526)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~lg~~~ 472 (526)
..+..+.++..++........ ..+.......+.....+...+....+..+..|+ +++.+.++.+...++|..+
T Consensus 89 ---~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~ 165 (500)
T PRK09584 89 ---RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF 165 (500)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH
Confidence 233344444444444333322 222222222222223333445555667777653 3456788999999999999
Q ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHH
Q 009757 473 GTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYII 507 (526)
Q Consensus 473 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (526)
+|.+.|++.+..| |+..|.+.++..+++.+.++.
T Consensus 166 gp~i~g~l~~~~g-~~~~F~i~~i~~~i~~i~~~~ 199 (500)
T PRK09584 166 SMLATPWLAAKYG-WSVAFALSVVGMLITVVNFAF 199 (500)
T ss_pred HHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887 999998877666665544433
No 169
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.36 E-value=1.8e-11 Score=124.17 Aligned_cols=164 Identities=18% Similarity=0.060 Sum_probs=124.1
Q ss_pred hhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccc-h-HHHHH
Q 009757 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS-L-LALLA 194 (526)
Q Consensus 117 ~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~-~-~~l~~ 194 (526)
......|.+.++.|.+....++......+...++.++.|+++||+|||+.++.+.++.+++.++++.....+ . .....
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 334456888888999888778887888888999999999999999999999999999988877765431111 1 12233
Q ss_pred HHHHhhhhccc-hhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHH------hhcCchhHHHHHHHHHHH
Q 009757 195 MRAVVGLAEGV-ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM------SQAGIFGPFVIFGLSGFL 267 (526)
Q Consensus 195 ~r~l~Gig~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~------~~~gw~~~f~~~~~~~~~ 267 (526)
+.++.+++.+. ..+....++.|.+|+++|+.++++......+|.++++.+.+.+. +..+|+..|++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 33444444443 34677899999999999999999999999999998876665443 578899999998888777
Q ss_pred HHHHHHhhccCCC
Q 009757 268 WVLVWLSATSSTP 280 (526)
Q Consensus 268 ~~~~~~~~~~~~~ 280 (526)
..++.+++.||++
T Consensus 449 ~~~~~~~~~~e~~ 461 (479)
T PRK10077 449 AALFMWKFVPETK 461 (479)
T ss_pred HHHHHHhccccCC
Confidence 7776666666543
No 170
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.36 E-value=2.1e-10 Score=102.39 Aligned_cols=175 Identities=17% Similarity=0.108 Sum_probs=134.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSL 176 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 176 (526)
||..+........ .....+.++..-|++++.+|+|.+|...+.++..+|..+ +++.|.+.|++|++.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~~-~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQL-CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHH-hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 3555444444443 444667888899999999999999999999999999987 58889999999999999999999999
Q ss_pred HHhhhhhcc-----ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 009757 177 ATFLTPWAA-----DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ 251 (526)
Q Consensus 177 ~~~~~~~~~-----~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~ 251 (526)
|..+..++. ..++|.+.+..++.|.+.+....+......+.|| ++||.+.|+.-...+++..+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 998876653 2467888888888888888777777777778897 6899999999999999998888877777654
Q ss_pred cCchhHHHHHHHH-HHHHHHHHHhh
Q 009757 252 AGIFGPFVIFGLS-GFLWVLVWLSA 275 (526)
Q Consensus 252 ~gw~~~f~~~~~~-~~~~~~~~~~~ 275 (526)
..-+. +++.+.. .++.++..++.
T Consensus 158 ~~~~f-ll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 158 DPSSF-LLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred ChHHH-HHHHHHHHHHHHHHHhhhe
Confidence 22333 3333433 33333333333
No 171
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.35 E-value=2.3e-11 Score=120.08 Aligned_cols=143 Identities=13% Similarity=0.091 Sum_probs=122.2
Q ss_pred CCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhh
Q 009757 130 GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPA 209 (526)
Q Consensus 130 ~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~ 209 (526)
+.+....|++.++..+...++.+..|++.||+|+|+.+.++.++.+++..+.... ++.+.+++.++++|++.+.....
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA--TTALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHH
Confidence 5566678999999999999999999999999999999999999988888877777 88888899999999998776667
Q ss_pred hHHHHhhhcCcchhhHHHHH-HHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHh
Q 009757 210 MNNMVARWFPQTERARAVAI-AMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (526)
Q Consensus 210 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 274 (526)
...++.+..+++.++...+. .+....+|..+++.++|++.+..||+..|.+.+++.++..++..+
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 77778888887777776666 678899999999999999999999999999998887776655443
No 172
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.35 E-value=4.5e-11 Score=117.63 Aligned_cols=165 Identities=13% Similarity=0.066 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHH
Q 009757 333 NAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIA 412 (526)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (526)
.+............+|.+.++ +|.+..+.+++.+...++..++.++.|++.||++|| ..+..+.+...+.
T Consensus 14 ~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r---------~~~~~~~~~~~~~ 83 (385)
T TIGR00710 14 SILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR---------PVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh---------HHHHHHHHHHHHH
Confidence 333444555555667766666 899999999999999999999999999999999988 2333344444444
Q ss_pred HHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHH
Q 009757 413 LIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFL 491 (526)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~ 491 (526)
.+.....++.+......++.....+...+....+..+..| ++|+++.|+.+....++..+++.+.+.+.+..| ++..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~ 162 (385)
T TIGR00710 84 SLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAIF 162 (385)
T ss_pred HHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHH
Confidence 4444444555554444444333344445556666777766 689999999999999999999999999998877 88888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009757 492 LLTSLLYFLSALFYIIF 508 (526)
Q Consensus 492 ~~~~~~~~~~~~~~~~~ 508 (526)
++.+++.++..+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 163 AFLSLAGILLSALIFFI 179 (385)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 87777666655554443
No 173
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.35 E-value=3.4e-11 Score=118.55 Aligned_cols=150 Identities=18% Similarity=0.119 Sum_probs=115.7
Q ss_pred chhhhhhhcCCccchhhHHHHHHHH-HHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhh-c---cccchHHHHHH
Q 009757 121 AIVPLSLAHGWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW-A---ADTSLLALLAM 195 (526)
Q Consensus 121 ~~~~l~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~---~~~~~~~l~~~ 195 (526)
..+.+.+|.|.+++++|++...... ...++.++.|++.||+|+|+.+.++.++.++..+.... . ..++.+.++..
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 3455666789999999999888764 66677899999999999999988877665333332211 1 01334445555
Q ss_pred HHHhhhhccchhhhhHHHHhhhcCc-chhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 009757 196 RAVVGLAEGVALPAMNNMVARWFPQ-TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVL 270 (526)
Q Consensus 196 r~l~Gig~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~ 270 (526)
..+.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..||+..|++.+++.++..+
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 5666777787778888888788776 78999999999999999999999999999999999999988776665443
No 174
>TIGR00895 2A0115 benzoate transport.
Probab=99.35 E-value=8.7e-12 Score=123.18 Aligned_cols=140 Identities=21% Similarity=0.212 Sum_probs=113.1
Q ss_pred HHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccc
Q 009757 107 ALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD 186 (526)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 186 (526)
..++............|.+.+++|.+..+.+++.+...++..++.++.|++.||+|+|+.+....+......++....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 335 (398)
T TIGR00895 258 LYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTL-- 335 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh--
Confidence 333333444445555678888899999999999999999999999999999999999955544444333333333324
Q ss_pred cchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q 009757 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 187 ~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 248 (526)
.+.+.+++..++.|++.+...+...+++.|.+|+++|+++.|+......+|..+||.++|++
T Consensus 336 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 336 FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 67777888889999999999999999999999999999999999999999999999999875
No 175
>PRK09952 shikimate transporter; Provisional
Probab=99.34 E-value=5.9e-11 Score=118.46 Aligned_cols=152 Identities=11% Similarity=0.042 Sum_probs=113.0
Q ss_pred hhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhc--cccchHHHHHHHHHhhh
Q 009757 124 PLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA--ADTSLLALLAMRAVVGL 201 (526)
Q Consensus 124 ~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~Gi 201 (526)
.+.+++|.+......+..+..+...++.++.|+++||+|||+++..+.++..++.+.+... ..++.+.+++..++.|+
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 3456788888766666666677778888999999999999999888877665554333221 11334555556677788
Q ss_pred hccchhhhhHHHHhhhcCcchhhHHHHHHH-hhhhhHHHHHHHHHHHHHhhc--CchhHHHHHHHHHHHHHHHHHhh
Q 009757 202 AEGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQA--GIFGPFVIFGLSGFLWVLVWLSA 275 (526)
Q Consensus 202 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~ 275 (526)
+.+...+...+++.|.+|.+.|+.+.++.. .+..+|..++|.+.+++.+.. +|+..+...++..++..+..+..
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 888888888999999999999998988854 445589999999999998743 48888887777776666555443
No 176
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.34 E-value=7.5e-11 Score=115.71 Aligned_cols=171 Identities=11% Similarity=-0.068 Sum_probs=128.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHH
Q 009757 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQS 403 (526)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 403 (526)
+.++.+.+..++...........+|.+.++ +|.+..+.++..+...++..++.++.|++.||+|+| ..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~~~ 72 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK---------HILL 72 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH---------HHHH
Confidence 456667777777777777888888887776 899999999999999999999999999999999988 3344
Q ss_pred HHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcc
Q 009757 404 IGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (526)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~ 482 (526)
.+....++..+.....++.+..++.-++.+...+...+.......+..+ ++|+++.|+......++..++|.+.+++.+
T Consensus 73 ~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 73 FLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 4555555555555555666655555444333333334455556667766 589999999999999999999999999998
Q ss_pred ccchhHHHHHHHHHHHHHHHHHH
Q 009757 483 LVGSFQGFLLLTSLLYFLSALFY 505 (526)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~ 505 (526)
..| ++..|.+.+++.++..+..
T Consensus 153 ~~g-wr~~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 153 EFS-WRYTFLLIAVFNIAVLASI 174 (382)
T ss_pred hcc-HHHHHHHHHHHHHHHHHHH
Confidence 877 8888888777665554443
No 177
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.34 E-value=1.2e-10 Score=114.52 Aligned_cols=155 Identities=12% Similarity=-0.040 Sum_probs=114.9
Q ss_pred HHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc
Q 009757 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (526)
...+.....+|.+.++ +|.++.+.++..+...++..+++++.|++.||+||| ..+..+.++.++..+...
T Consensus 34 ~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr---------~~~~~~~~~~~~~~~~~~ 103 (394)
T PRK10213 34 IVEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR---------YVVILFAVLLTLSCLLVS 103 (394)
T ss_pred HHHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH---------HHHHHHHHHHHHHHHHHH
Confidence 3344445567777766 899999999999999999999999999999999998 333444444444444444
Q ss_pred cCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHH
Q 009757 418 AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSL 496 (526)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~ 496 (526)
..++.+..+..-++.+...+...+....+..+..| ++|+++.++.....+++..++|.+.+.+.+..| |+..|++.++
T Consensus 104 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~ 182 (394)
T PRK10213 104 FANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WRNVFNAAAV 182 (394)
T ss_pred HHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HHHHHHHHHH
Confidence 45566655555444444444455666666777776 689999999999999999999999999999887 8888888776
Q ss_pred HHHHHHH
Q 009757 497 LYFLSAL 503 (526)
Q Consensus 497 ~~~~~~~ 503 (526)
+.+++.+
T Consensus 183 l~~~~~l 189 (394)
T PRK10213 183 MGVLCIF 189 (394)
T ss_pred HHHHHHH
Confidence 6555443
No 178
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.32 E-value=1.1e-10 Score=115.69 Aligned_cols=175 Identities=14% Similarity=0.166 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHHhhh-hhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcCh--HHHHHHHHHHH
Q 009757 99 KVVSMLALALALCNAD-RVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK--IIMAWGVALWS 175 (526)
Q Consensus 99 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~ 175 (526)
+.+....+++++..-. ..........-.+++|++..+...+.-+..+...++++++|++.||+|.| +++.++.+++.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~ 360 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWI 360 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 3344444444433322 23334445555668999999999999999999999999999999999999 88888888775
Q ss_pred HHHhhhhh--------ccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHH
Q 009757 176 LATFLTPW--------AADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (526)
Q Consensus 176 ~~~~~~~~--------~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~ 247 (526)
+..+...+ . ++-+.+++.-++.|+..|..++...++.++..|+++.+..+|++....-....+||++.+.
T Consensus 361 ~i~~~g~~G~~~~~~g~--~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~ 438 (477)
T PF11700_consen 361 IIPLYGLFGFWPSFFGL--KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGL 438 (477)
T ss_pred HHHHHHHHHhhhcccCc--ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55544333 3 6788899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcC-chhHHHHHHHHHHHHHHHHHhh
Q 009757 248 LMSQAG-IFGPFVIFGLSGFLWVLVWLSA 275 (526)
Q Consensus 248 l~~~~g-w~~~f~~~~~~~~~~~~~~~~~ 275 (526)
+.+..| -|..+....++.++.+++.++.
T Consensus 439 i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 439 ITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 998776 8888888877777666655443
No 179
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.5e-11 Score=122.60 Aligned_cols=176 Identities=18% Similarity=0.177 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhc--ChHHHHHHHHHHHH
Q 009757 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYG--GKIIMAWGVALWSL 176 (526)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~~ 176 (526)
+.+....+...+...........+|.+.++.+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..++.++.++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 3455556666666677777788899999999999999999999999999999999999999988 45677788888888
Q ss_pred HHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-ch
Q 009757 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IF 255 (526)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g-w~ 255 (526)
+.+.+++. ++++.++..-.+.|++.|.........+.|..+.++-..+.|+.....+++.++||++++++.+..| |.
T Consensus 378 ~~~~~p~~--~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 378 ARLFLPFA--TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 88889999 9999999999999999999888888899999999999999999999999999999999999988777 99
Q ss_pred hHHHHHHHHHHHHHHHHHhhc
Q 009757 256 GPFVIFGLSGFLWVLVWLSAT 276 (526)
Q Consensus 256 ~~f~~~~~~~~~~~~~~~~~~ 276 (526)
..|+..++..++..+.+++..
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eehhhcChHHHHHHHHHHHhH
Confidence 999999988887776655543
No 180
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.31 E-value=1.4e-10 Score=117.86 Aligned_cols=170 Identities=15% Similarity=0.074 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 009757 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (526)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (526)
.+++..++............|.+.++ +|.+..+.+++.+...++..++.++.|++.||+||| ..+..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~ 75 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR---------RLFLISTF 75 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH---------HHHHHHHH
Confidence 44455555555666667778877777 899999999999999999999999999999999998 33444445
Q ss_pred HHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccch
Q 009757 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGS 486 (526)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~ 486 (526)
+..+..+.....++.+..+...++.+...+...+....+..+..| ++|+++.++......+|..++|.+.|++.++.|
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~- 154 (485)
T TIGR00711 76 AFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH- 154 (485)
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-
Confidence 555555555555555555555444444444455666667777766 799999999999999999999999999999887
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 009757 487 FQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
|+..|++.+.+.++..++....
T Consensus 155 w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 155 WRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred ceehhhhhhHHHHHHHHHHHHH
Confidence 8888887776666555544443
No 181
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.30 E-value=3.6e-10 Score=114.71 Aligned_cols=170 Identities=16% Similarity=0.094 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHH
Q 009757 327 WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF 406 (526)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 406 (526)
..+++..++...-...+..-+|.+.++ +|.+..+.++..+.+.++..++.+..|+++||+||| ..+..+.
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk---------~~l~~~~ 78 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK---------RLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHHH
Confidence 344555566556666677778888777 899999999999999999999999999999999999 3444455
Q ss_pred HHHHHHHHhhccCchhHHHHHHHHH-HHHHHhhhhhhHH-HHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccc
Q 009757 407 IAPGIALIGLTAAKSPVMASAWLTL-AIGMKSFSHSGFL-VNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVEL 483 (526)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~ 483 (526)
....+..+.....++.+..++.-.+ +.+.. ...+... ....+..| ++|+++.|+......+|..+||.+.|.+.++
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~-~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAA-MIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5555555555555666655555333 44333 3333333 34455544 7999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 484 VGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 484 ~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
.| |++.|++...+.++.+++....
T Consensus 158 ~g-wr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 158 FY-WGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred CC-hHHHHHHHHHHHHHHHHHHHHh
Confidence 87 9999888776666655554444
No 182
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.30 E-value=3.1e-10 Score=111.86 Aligned_cols=170 Identities=13% Similarity=-0.006 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 009757 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (526)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (526)
......+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|++.||+||| ..+..+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r---------~~l~~~~~ 76 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK---------PVAIPGAA 76 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh---------HHHHHHHH
Confidence 33444444455555666778887777 899999999999999999999999999999999988 23334444
Q ss_pred HHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccch
Q 009757 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGS 486 (526)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~ 486 (526)
...+........++.+......++.....+...+....+..+..| ++|+++.|+.+....++..++|.+.+.+.+..|
T Consensus 77 ~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g- 155 (392)
T PRK10473 77 LFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP- 155 (392)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-
Confidence 444444444444444443333333222233334455566666665 799999999999999999999999998888776
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 009757 487 FQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
|+..+++.+++.++..++.+..
T Consensus 156 ~~~~~~~~~~~~~i~~~~~~~~ 177 (392)
T PRK10473 156 WQSLFYTMAAMGILVLLLSLFI 177 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888777666555554333
No 183
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.30 E-value=4.2e-11 Score=121.84 Aligned_cols=163 Identities=20% Similarity=0.066 Sum_probs=109.4
Q ss_pred hhhcchhhhhhhcCCccchhhH------------HHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhc
Q 009757 117 VMSVAIVPLSLAHGWSRSFSGI------------VQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (526)
Q Consensus 117 ~~~~~~~~l~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 184 (526)
......|.+.++.|.+....+. ...+..++..++.++.++++||+|||++++++.++.+++.++.++.
T Consensus 306 ~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 306 GVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred ccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 4444577777888876543221 1233445666788899999999999999998888877776655543
Q ss_pred cc--cchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh----------c
Q 009757 185 AD--TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ----------A 252 (526)
Q Consensus 185 ~~--~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~----------~ 252 (526)
.. ++...+...-+...++..+..+....+.+|.+|.+.|+++.++......+|.++++.+.+.+.+. .
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 465 (502)
T TIGR00887 386 YNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGI 465 (502)
T ss_pred HHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccc
Confidence 10 11111111111122222233456677789999999999999999999999999999999988773 3
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhccCCC
Q 009757 253 GIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (526)
Q Consensus 253 gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (526)
++...|++.+++.++..+.. ++.||++
T Consensus 466 ~~~~~~~i~~~~~~~~~i~~-~~lpEt~ 492 (502)
T TIGR00887 466 WMGHVLEIFALFMFLGILFT-LLIPETK 492 (502)
T ss_pred cchHHHHHHHHHHHHHHHHh-eEeccCC
Confidence 45667888877776665544 4556654
No 184
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.30 E-value=1.4e-10 Score=116.68 Aligned_cols=175 Identities=13% Similarity=0.083 Sum_probs=124.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHH-HHhhcCccchhHHHHH
Q 009757 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM-LIQRGTSVTLTRKILQ 402 (526)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~~~~~~~~~~~~~~~~ 402 (526)
+.++.++...+...++++++..+++.|+++.+|++..+++++...+.....+..+++|+++|| +||| ..+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r---------~~~ 84 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK---------RTI 84 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH---------HHH
Confidence 346666777778889999999999999999899999999998888888888888899999999 9999 233
Q ss_pred HHHHHHHHHHHHhhccCch-hHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-c--chhhHHHHHHHHHhHHHHHHHHHHh
Q 009757 403 SIGFIAPGIALIGLTAAKS-PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-Q--YSGVLHGISNTAGTFAAILGTVGAG 478 (526)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~g~~~g~~~~~~~lg~~~~~~~~g 478 (526)
..+.++..++.+....... .....+...+.....+...+.......+..| + +|+.++++.+...++|..++|.+.|
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 3444444443333333222 2222222333233334444555667777765 3 4577899999999999999999999
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 479 FFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 479 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
++.++.| |+..|++.++..+++++.+...
T Consensus 165 ~l~~~~g-w~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 165 VIADKFG-YSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHHhhC-hHHHHHHHHHHHHHHHHHHHHc
Confidence 9999987 8888888766555555444443
No 185
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.29 E-value=2.4e-09 Score=103.40 Aligned_cols=316 Identities=14% Similarity=0.039 Sum_probs=185.9
Q ss_pred HHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcC
Q 009757 140 QSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP 219 (526)
Q Consensus 140 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~ 219 (526)
.++-+....+..++.+.+.|+.|.|+.++++...+....+.+.+ +|-+.++++..+.|+|.+..+..--.++++..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~---~N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF---PNSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh---cchHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 67777888899999999999999999999999999998887766 467888999999999999999999999999999
Q ss_pred cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc--------Cch-h----------HHHHHHHHHHHHHHHHHhhccCCC
Q 009757 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--------GIF-G----------PFVIFGLSGFLWVLVWLSATSSTP 280 (526)
Q Consensus 220 ~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~--------gw~-~----------~f~~~~~~~~~~~~~~~~~~~~~~ 280 (526)
++++.+..++.......+.++|..+...+...- +-+ . ...+.+++..+..+...-.... |
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~-p 211 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL-P 211 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec-C
Confidence 999999999999999999988877654442211 111 0 1111111111111111111111 1
Q ss_pred CCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHH--hcCC
Q 009757 281 DRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFV--YHID 358 (526)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s 358 (526)
.+.. ..+++ ..+....+..+..-+++++|+.+.+....+..+.....+....|..+.-. .+.+
T Consensus 212 ~~~~---~~~~~------------~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n 276 (461)
T KOG3098|consen 212 SKDV---VNCKS------------SSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSN 276 (461)
T ss_pred ccch---hhhhh------------hccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCc
Confidence 1000 00000 00000001112223456777777776666665555555555566555432 2222
Q ss_pred c-chhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhh-ccC-----------------
Q 009757 359 L-RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL-TAA----------------- 419 (526)
Q Consensus 359 ~-~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------------- 419 (526)
. ...++.....+++..++.+..+.+.+|..+.+.. ..+.++..+..+..++. ...
T Consensus 277 ~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~------~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~ 350 (461)
T KOG3098|consen 277 TTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK------PTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFT 350 (461)
T ss_pred chhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC------cchhHHHHHHHHHHHHHhccccccCCCCCCcccccccc
Confidence 2 2234444455566666667777777776555322 22223332222222211 100
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhh
Q 009757 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFF 480 (526)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l 480 (526)
+......+..++.+..-.......+.......|++|.++.++.-.-..++..++-......
T Consensus 351 ~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 351 PSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred cchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 0112222222233333445556667778888899999999988888888877766655543
No 186
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.29 E-value=1.1e-10 Score=111.40 Aligned_cols=168 Identities=14% Similarity=0.107 Sum_probs=139.7
Q ss_pred HhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchH
Q 009757 111 CNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL 190 (526)
Q Consensus 111 ~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (526)
+.++++ +......+-++-+.++..+|.+.+...+.-++...+..++.+|+|.|+.++++.+++++=.++++++ ++.+
T Consensus 237 ~vfdqq-f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~--~~~~ 313 (412)
T PF01306_consen 237 DVFDQQ-FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA--TNPW 313 (412)
T ss_dssp HHHHHH-HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHH
T ss_pred HHHHHH-HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh--cchH
Confidence 334443 4444444444445566789999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHH-HhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q 009757 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIA-MGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWV 269 (526)
Q Consensus 191 ~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~ 269 (526)
.+.+.+.+.|+-.+....+...|+++.+|+|..++...+. +...++|..+.+.++|.+.++.|.+..|++.+.+.++..
T Consensus 314 ~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~ 393 (412)
T PF01306_consen 314 VISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFT 393 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988888888884 788999999999999999999999999999999888877
Q ss_pred HHHHhhccCCCC
Q 009757 270 LVWLSATSSTPD 281 (526)
Q Consensus 270 ~~~~~~~~~~~~ 281 (526)
++..+..+++++
T Consensus 394 li~~f~l~~~~~ 405 (412)
T PF01306_consen 394 LISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHS--SSS
T ss_pred HHheeeecCCCc
Confidence 777777655443
No 187
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.29 E-value=7.1e-11 Score=118.08 Aligned_cols=163 Identities=11% Similarity=-0.033 Sum_probs=112.4
Q ss_pred hhhcchhhhhhh-cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHH---HHHhhhhhccccchHHH
Q 009757 117 VMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS---LATFLTPWAADTSLLAL 192 (526)
Q Consensus 117 ~~~~~~~~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~~~~~~~~l 192 (526)
......|.+.++ .|.++.+.++....+.++..++.++.|+++||+++++....+..... ++.+.+......+.+..
T Consensus 269 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T TIGR00712 269 GVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVD 348 (438)
T ss_pred HHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 334455666554 68999999999999999999999999999999975432222322221 22222222211234444
Q ss_pred HHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhH-HHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 009757 193 LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSG-NAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (526)
Q Consensus 193 ~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G-~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~ 271 (526)
.+..++.|++.............|.+|+++|+.+.|+.+....+| .+++|.+.+.+.++.||...|++.++..++..+.
T Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 428 (438)
T TIGR00712 349 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 428 (438)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 444555555433323333456789999999999999998887776 5789999999999999999999888877777776
Q ss_pred HHhhccCC
Q 009757 272 WLSATSST 279 (526)
Q Consensus 272 ~~~~~~~~ 279 (526)
.++..+|+
T Consensus 429 ~~~~~~~~ 436 (438)
T TIGR00712 429 LIVVMIGE 436 (438)
T ss_pred HHHHHhhc
Confidence 66666554
No 188
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.29 E-value=6.1e-11 Score=118.79 Aligned_cols=123 Identities=17% Similarity=0.184 Sum_probs=106.3
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhH
Q 009757 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMN 211 (526)
Q Consensus 132 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~ 211 (526)
+..+.+++.++..++..++.+++|+++||+|+|+++.++.++.+++.++..+.. ++.+.+++..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG-SNLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566778888888999999999999999999999999999988888877766652 4567777888899999999899999
Q ss_pred HHHhhhcC-------cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCch
Q 009757 212 NMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (526)
Q Consensus 212 ~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~ 255 (526)
++++|..| ++++|.+.++.+....+|..+++.+.+.+.+..||.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99998865 456799999999999999999999999998877763
No 189
>PRK11043 putative transporter; Provisional
Probab=99.29 E-value=2.8e-10 Score=112.62 Aligned_cols=163 Identities=12% Similarity=0.082 Sum_probs=108.9
Q ss_pred HHHHHHHHHhHHHH--HHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHH
Q 009757 337 SWGFFVILSWMPIY--FNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALI 414 (526)
Q Consensus 337 ~~~~~~~~~~~~~~--~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (526)
...+.....+.|.+ +++.+|.+..+.++..+...++..++.++.|++.||++||+ .+..+.....+..+
T Consensus 16 ~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~---------~~~~~~~~~~~~~~ 86 (401)
T PRK11043 16 MLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKP---------VLLAGLSLFALGSL 86 (401)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcH---------HHHHHHHHHHHHHH
Confidence 33344444444543 44458999999999999999999999999999999999982 33333333334343
Q ss_pred hhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHH
Q 009757 415 GLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLL 493 (526)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~ 493 (526)
.....++.+...+..++.....+...+.......+..+ ++++...+..+....++..++|.+.+++.+..| ++..|++
T Consensus 87 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~~ 165 (401)
T PRK11043 87 GMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFAT 165 (401)
T ss_pred HHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHH
Confidence 33344444444433332222222223334455556665 578888899888899999999999999999887 8888887
Q ss_pred HHHHHHHHHHHHHHHh
Q 009757 494 TSLLYFLSALFYIIFS 509 (526)
Q Consensus 494 ~~~~~~~~~~~~~~~~ 509 (526)
.+++.++..++.+..+
T Consensus 166 ~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 166 LFAITLLLILPTLRLK 181 (401)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 7777666655554443
No 190
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.29 E-value=2e-10 Score=112.18 Aligned_cols=148 Identities=11% Similarity=0.000 Sum_probs=104.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHH
Q 009757 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (526)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (526)
.++..++..++.+.....+..+.|.++++.+|++..+.+++.+...++..++.++.|++.||+|+| ..+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~ 72 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR---------YTTTL 72 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch---------HHHHH
Confidence 356666777777777788888899777777999999999999999999999999999999999998 23334
Q ss_pred HHHHHHHHHHhhccCc-hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcc
Q 009757 405 GFIAPGIALIGLTAAK-SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE 482 (526)
Q Consensus 405 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~ 482 (526)
+.+...+..+.....+ +.+......++.+...+. ......+..+..| ++|+++.++.....++|..+++.+.+.+.+
T Consensus 73 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 73 SLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4444444444444444 444443333332222222 2334455666666 689999999998888888888877776664
No 191
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.29 E-value=2.6e-10 Score=107.71 Aligned_cols=157 Identities=16% Similarity=0.139 Sum_probs=120.0
Q ss_pred HHHHHHHHHhhhhhhhhcchhhhhh---hcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh
Q 009757 103 MLALALALCNADRVVMSVAIVPLSL---AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (526)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 179 (526)
+..+..++............+.+.+ .+|.++.+.++..+.+..+..++.+..+++.||+|+|+.+.++..+..++.+
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~ 223 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSI 223 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 3344444444344444444455443 3689999999999999999999999999999999999999888888888776
Q ss_pred hhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHH
Q 009757 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (526)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~ 259 (526)
+.... ++...+ .+-++.|++.+..+|...+...+..|+ +.+.+.++. ....+|..++|++.|.+.+..|.+..|+
T Consensus 224 l~~~~--~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 224 GAALT--HGYVAM-WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHHHc--CCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 66555 443333 355688999999999999999998864 456667775 5677999999999999999999998887
Q ss_pred HHHHH
Q 009757 260 IFGLS 264 (526)
Q Consensus 260 ~~~~~ 264 (526)
+..+.
T Consensus 299 v~~~~ 303 (310)
T TIGR01272 299 LPVPC 303 (310)
T ss_pred HHHHH
Confidence 55443
No 192
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.29 E-value=3e-10 Score=112.44 Aligned_cols=167 Identities=13% Similarity=0.057 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHH
Q 009757 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (526)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (526)
..+.+++.+.-...+....| .+++.+|++..+.+++.+...++..++.++.|++.||+||| ..+..++++
T Consensus 13 ~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r---------~~~~~~~~~ 82 (412)
T TIGR02332 13 LFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR---------RWIAGIMVL 82 (412)
T ss_pred HHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH---------HHHHHHHHH
Confidence 33444444444444555555 56666999999999999999999999999999999999999 334445555
Q ss_pred HHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccc----
Q 009757 409 PGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVEL---- 483 (526)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~---- 483 (526)
.++..+.....++.+..+..-++.+...+...+....+..+..| ++|+++.|+.+....+|..+++.+.+++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 55555544455555544444433333333444555666777776 6899999999999999999999999988742
Q ss_pred --cchhHHHHHHHHHHHHHHHHHHH
Q 009757 484 --VGSFQGFLLLTSLLYFLSALFYI 506 (526)
Q Consensus 484 --~g~~~~~~~~~~~~~~~~~~~~~ 506 (526)
.| |+..|.+.++..++..++..
T Consensus 163 ~~~g-wr~~f~~~~~~~l~~~~~~~ 186 (412)
T TIGR02332 163 ALKG-WQWLFLLEGFPSVILGVMTW 186 (412)
T ss_pred Cccc-hhHHHHHHHHHHHHHHHHHh
Confidence 34 89999887776655444443
No 193
>PRK15075 citrate-proton symporter; Provisional
Probab=99.29 E-value=1.7e-10 Score=115.24 Aligned_cols=144 Identities=17% Similarity=0.093 Sum_probs=104.2
Q ss_pred hhhhhhhhcchhhhhhh-cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh-hh-hhccccc
Q 009757 112 NADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF-LT-PWAADTS 188 (526)
Q Consensus 112 ~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~-~~-~~~~~~~ 188 (526)
...........|.+.++ +|.+..+.++....+.++..++.+++|+++||+|||+.+.++.++..+... .. .....++
T Consensus 251 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (434)
T PRK15075 251 TVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPS 330 (434)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 33333445556776654 799999999999999999999999999999999999988876554433221 11 1111144
Q ss_pred hHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHh-hhhhHHHHHHHHHHHHHhhcCch
Q 009757 189 LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMG-GFTSGNAIGLVLSPILMSQAGIF 255 (526)
Q Consensus 189 ~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~ig~~l~~~l~~~~gw~ 255 (526)
+..+.+..++.|++.+...+....++.|.+|+++|+.+.++... +..++..++|.+.+++.++.|++
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 331 FARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 44444555666677776667777889999999999999998644 44456788999999999988864
No 194
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.29 E-value=2.5e-10 Score=110.72 Aligned_cols=160 Identities=11% Similarity=-0.012 Sum_probs=107.8
Q ss_pred HHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc
Q 009757 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (526)
.....+...+|.+.+| +|.+..+.+++.+.+.++..++++..|++.||+||| .+....+...........
T Consensus 5 ~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr---------~~~~~~~~~~~~~~~~~~ 74 (368)
T TIGR00903 5 AIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR---------WFLFGSLATFAAAAGRLL 74 (368)
T ss_pred HHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch---------HHHHHHHHHHHHHHHHHH
Confidence 3445566677777776 899999999999999999999999999999999977 122222222222221112
Q ss_pred cCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHH
Q 009757 418 AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLL 497 (526)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 497 (526)
...+.+..+..-++.+...+...+......+..++++|+++.++.+....+|..+++.+.+++.+..| |+..|++.+++
T Consensus 75 ~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~l 153 (368)
T TIGR00903 75 DPFNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAAV 153 (368)
T ss_pred HhccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHH
Confidence 21234333333333222222333333334444455899999999999999999999999999998887 99999887777
Q ss_pred HHHHHHHHHHH
Q 009757 498 YFLSALFYIIF 508 (526)
Q Consensus 498 ~~~~~~~~~~~ 508 (526)
.++..+++...
T Consensus 154 ~~~~~~~~~~~ 164 (368)
T TIGR00903 154 AAAGIILVLAA 164 (368)
T ss_pred HHHHHHHHHHH
Confidence 66655544443
No 195
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.28 E-value=4.6e-09 Score=101.71 Aligned_cols=371 Identities=14% Similarity=0.016 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhhhhcCC-ccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLSLAHGW-SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 179 (526)
...+...+++.....-++....+.+..+..- +---.+...-.-.+..++.++..|.+.||..|.++...+.+.--++..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 3456777888888888888888887776632 333344444455667788889999999999999887766544332222
Q ss_pred ----hhh--hcccc-----c--hHHHHHHHHHhhhhccc-hhhhhHHHHhhhc------CcchhhHHHHHHHhhhhhHHH
Q 009757 180 ----LTP--WAADT-----S--LLALLAMRAVVGLAEGV-ALPAMNNMVARWF------PQTERARAVAIAMGGFTSGNA 239 (526)
Q Consensus 180 ----~~~--~~~~~-----~--~~~l~~~r~l~Gig~g~-~~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~ 239 (526)
+.. +.... + .+.+++.-.+.|.-.-. ......++=.||. +++.+.+.++.+.-.-.+..+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 211 11101 1 11222222222221111 1112222223442 456678888888888889999
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc----cCCCCCCCCCChhHHHHHHHhcccccccCC-------CC
Q 009757 240 IGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT----SSTPDRHPQISKYELEYILREKQKPLLMGN-------KH 308 (526)
Q Consensus 240 ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 308 (526)
++|++.|.+.+..+.+....+.++..++..++=+++. +..|+-..+.++++.+.............. .+
T Consensus 164 laPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (432)
T PF06963_consen 164 LAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWN 243 (432)
T ss_pred HHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHH
Confidence 9999999999988988888888877776655433322 122211111111000000000000000000 00
Q ss_pred CCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHH
Q 009757 309 KPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (526)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (526)
.-.....+|+..++.|.++. .+...+.++...++......|+... |+++...|.+-+...+.++.+.++..++.+|+|
T Consensus 244 ~~~~~~~~w~~Y~~q~vfla-s~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riG 321 (432)
T PF06963_consen 244 PLRTIIRGWRTYFRQPVFLA-SFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIG 321 (432)
T ss_pred HHHHHhccHHHHHhCHHHHH-HHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00112344556666665544 4444444555666778888999994 999999999999999999999999999999998
Q ss_pred hhcCccchhHHHHHHHHHHHHHHHHHhhccCc----hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHH
Q 009757 389 QRGTSVTLTRKILQSIGFIAPGIALIGLTAAK----SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISN 463 (526)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~ 463 (526)
..+.-.... .....++ ..++..+.....+ +...++..+.+.-.+.-..-.....+++|..| ++||...|+.+
T Consensus 322 lvr~G~~~l--~~q~~~L-~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~ 398 (432)
T PF06963_consen 322 LVRAGLWSL--WWQWVCL-ALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQN 398 (432)
T ss_pred chhhHHHHH--HHHHHHH-HHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHH
Confidence 763211100 1111111 1111111111111 11111111222111111222333444555444 69999999999
Q ss_pred HHHhHHHHHHHHH
Q 009757 464 TAGTFAAILGTVG 476 (526)
Q Consensus 464 ~~~~lg~~~~~~~ 476 (526)
...++...+.-.+
T Consensus 399 sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 399 SLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHH
Confidence 9998887765544
No 196
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.27 E-value=7.8e-11 Score=115.50 Aligned_cols=150 Identities=14% Similarity=0.011 Sum_probs=107.7
Q ss_pred HHHhhhhhhhhcchhhh-hhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcC-hHHHH-HH-HHHHHHHHhhhhhc
Q 009757 109 ALCNADRVVMSVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMA-WG-VALWSLATFLTPWA 184 (526)
Q Consensus 109 ~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~-~~-~~~~~~~~~~~~~~ 184 (526)
+.............|.+ .+++|.+..+.+++.+...++..++.++.|++.||.++ |+... .. .....++.......
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (379)
T TIGR00881 226 VFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLN 305 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcC
Confidence 33333333444445554 45679999999999999999999999999999998643 33222 21 12222222222221
Q ss_pred cccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHH
Q 009757 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPF 258 (526)
Q Consensus 185 ~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f 258 (526)
...+.+..+++.++.|+......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||++.|
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 306 PAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred cchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 11455566677777887666666667788999999999999999999999999999999999999999998754
No 197
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.27 E-value=8.7e-09 Score=105.88 Aligned_cols=158 Identities=18% Similarity=0.244 Sum_probs=128.7
Q ss_pred hcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhH-hcChHHHHHHHHHHHHHHhhhhhcccc------chHH
Q 009757 119 SVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLATFLTPWAADT------SLLA 191 (526)
Q Consensus 119 ~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~------~~~~ 191 (526)
..+...+.+.+|.+.+....+...+.....+.++++|+++|+ +|++++++++.++..++.++.++...+ ....
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 334455566789999999999999999999999999999997 599999999999999999887765211 1234
Q ss_pred HHHHHHHhhhhccchhhhhHHHHhhhcCcc---hhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc-------CchhHHHHH
Q 009757 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQT---ERARAVAIAMGGFTSGNAIGLVLSPILMSQA-------GIFGPFVIF 261 (526)
Q Consensus 192 l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~-------gw~~~f~~~ 261 (526)
.+++-.+.++|.|++-+...+...|.++++ +|...+.++..+.++|+++++.+.+++.+.. +|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 667788889999999999999999999754 4778899999999999999999999886443 699999999
Q ss_pred HHHHHHHHHHHHhhc
Q 009757 262 GLSGFLWVLVWLSAT 276 (526)
Q Consensus 262 ~~~~~~~~~~~~~~~ 276 (526)
+++.++..++.....
T Consensus 168 ~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 168 AILMILALIVFMAGS 182 (654)
T ss_pred HHHHHHHHHHHHHhc
Confidence 888887776655443
No 198
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.26 E-value=1.8e-10 Score=114.09 Aligned_cols=154 Identities=14% Similarity=0.032 Sum_probs=120.0
Q ss_pred hhhh-hhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhcc---ccchHHHHHHHH
Q 009757 122 IVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA---DTSLLALLAMRA 197 (526)
Q Consensus 122 ~~~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~ 197 (526)
.|.+ .+++|.++.+.++......++..++.++.|++.||+|+|+.+.++.++.+++.++..+.. .++++.+++..+
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS 317 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 4544 566899999999988888889999999999999999999999998888877777665431 135667778889
Q ss_pred HhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc
Q 009757 198 VVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (526)
Q Consensus 198 l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 276 (526)
+.|++.+...+......... ++++|++..+.++....+|..+|+.+++.+.+..++....+..++..++..+......
T Consensus 318 ~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK15402 318 LYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIFL 395 (406)
T ss_pred HHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999888777666655444 4589999999999999999999999999998888877666665555555444443333
No 199
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.25 E-value=2.7e-10 Score=111.70 Aligned_cols=157 Identities=11% Similarity=0.073 Sum_probs=114.5
Q ss_pred HHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccC
Q 009757 340 FFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA 419 (526)
Q Consensus 340 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (526)
.......+|.+.++ +|.+..+.+++.+...++..++.++.|++.||++|| ..+..+.+...+........
T Consensus 7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~i~~~~~~~~ 76 (377)
T PRK11102 7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK---------PVILGGTLVFALAAVACALA 76 (377)
T ss_pred HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh---------HHHHHHHHHHHHHHHHHHHH
Confidence 34455777888877 899999999999999999999999999999999988 33344444444444444444
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Q 009757 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLY 498 (526)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 498 (526)
++.+......++.....+...+....+..+..| ++|+++.++.+....+|..++|.+.+.+.+..| ++..|++.+++.
T Consensus 77 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 155 (377)
T PRK11102 77 QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAA 155 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHH
Confidence 444444444444333344444555666667766 689999999999999999999999999999877 888888777766
Q ss_pred HHHHHHHHH
Q 009757 499 FLSALFYII 507 (526)
Q Consensus 499 ~~~~~~~~~ 507 (526)
++..++...
T Consensus 156 ~~~~~~~~~ 164 (377)
T PRK11102 156 ILAAALVFF 164 (377)
T ss_pred HHHHHHHHH
Confidence 665554433
No 200
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.25 E-value=3.7e-10 Score=111.04 Aligned_cols=171 Identities=15% Similarity=0.065 Sum_probs=116.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHH
Q 009757 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQ 402 (526)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~ 402 (526)
+|+++.+.+..++..++........+.+.++ ++.+..+.+++.+.+.+...+..++.|++.||++||+ ++
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~---------vl 71 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGR---------VM 71 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCch---------hh
Confidence 4567777777777777666666666666665 7888889999999999999999999999999999993 22
Q ss_pred HHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhc
Q 009757 403 SIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (526)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~ 481 (526)
..+..+.++..+......+. +...++.+...+...+....++.+..| ++|++++|+.+....++..+||.++|.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 72 FIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222221112222 222223333445556677777777776 69999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 482 ELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 482 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
+.. +...+.+.+.+.+++.+....+
T Consensus 149 ~~~--~~~~~~i~~~~~~~~~~~~~~l 173 (393)
T PRK11195 149 DPH--AEAALAVCALIYLLAALFNLFI 173 (393)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHhcC
Confidence 863 5555555555444444433333
No 201
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.24 E-value=9.8e-10 Score=110.80 Aligned_cols=163 Identities=10% Similarity=0.071 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHH
Q 009757 334 AMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL 413 (526)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (526)
++.....+....+.|.+.++ +|++..+.+++.+...++..++.++.|++.||+|+| ..+..+.+..++..
T Consensus 46 ~~~~~~~~~~~~~~~~l~~~-~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r---------~~~~~~~~~~~~~~ 115 (476)
T PLN00028 46 FTCFVSTFAAAPLLPIIRDN-LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR---------YGSAFLLMLTAPAV 115 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHHHHHHHHHHHHH
Confidence 33333444455555666555 899999999998888899999999999999999998 23333444444444
Q ss_pred HhhccCchhHHHHHHH-HHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcc----c----
Q 009757 414 IGLTAAKSPVMASAWL-TLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE----L---- 483 (526)
Q Consensus 414 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~----~---- 483 (526)
+.....++.+...+.. +.+.+.. ... ....++.+..| ++||.+.|+.+...++|..+++.+.+.+.+ .
T Consensus 116 ~~~~~~~s~~~l~~~r~l~G~~~~-~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 193 (476)
T PLN00028 116 FCMSLVSSATGFIAVRFFIGFSLA-TFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPS 193 (476)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHH-hhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 4444444444443332 2333322 222 23344566666 699999999998888888888776665532 1
Q ss_pred -cchhHHHHHHHHHHHHHHHHHHHHHh
Q 009757 484 -VGSFQGFLLLTSLLYFLSALFYIIFS 509 (526)
Q Consensus 484 -~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (526)
.| |+..|++.+++.++..++.+++.
T Consensus 194 ~~g-Wr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 194 FTA-WRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred hhh-hHHHHHHHHHHHHHHHHHHHHHc
Confidence 24 88999988887766665555543
No 202
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.23 E-value=4.5e-10 Score=111.00 Aligned_cols=148 Identities=17% Similarity=0.110 Sum_probs=107.8
Q ss_pred hhhhhhhcCCccchhhHHHHHHH-HHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhh---hhccccchHHHHHHH-
Q 009757 122 IVPLSLAHGWSRSFSGIVQSSFL-WGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT---PWAADTSLLALLAMR- 196 (526)
Q Consensus 122 ~~~l~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~l~~~r- 196 (526)
.+.+.+++|.++.+++++.+... ++..++.+++|++.||+|+|+.+.++.++..+..+.+ ++.. ++.+.+++.-
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~ 311 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP-KHLWTMALAIG 311 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHH
Confidence 34566778999999999986654 5688999999999999999998887777666554433 3331 3556555554
Q ss_pred ---HHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q 009757 197 ---AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (526)
Q Consensus 197 ---~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 273 (526)
+..|++.+...+....++.+.+|.++ .++.+...++|..+++.++|.+.+.+||+..|.+.++++++..++..
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 34556666667777777777776554 45555566778877778899999999999999998888777655544
Q ss_pred h
Q 009757 274 S 274 (526)
Q Consensus 274 ~ 274 (526)
.
T Consensus 388 ~ 388 (402)
T PRK11902 388 L 388 (402)
T ss_pred H
Confidence 3
No 203
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.22 E-value=9.5e-10 Score=108.51 Aligned_cols=165 Identities=12% Similarity=0.003 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHH
Q 009757 329 IIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIA 408 (526)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 408 (526)
..+..++...........+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+ .+..+...
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~---------~~~~~~~~ 82 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP---------VILVGMSI 82 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH---------HHHHHHHH
Confidence 3344444444445555567777766 8999999999999999999999999999999999982 23333333
Q ss_pred HHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchh
Q 009757 409 PGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSF 487 (526)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~ 487 (526)
..+..+.....++.+......++.....+...+.......+..+ ++++.+.+..+....++..++|.+.+.+.+..| |
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~ 161 (394)
T PRK11652 83 FILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-W 161 (394)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-h
Confidence 33333333334444444433333222222333344445556555 688999999999999999999999999998877 8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009757 488 QGFLLLTSLLYFLSALF 504 (526)
Q Consensus 488 ~~~~~~~~~~~~~~~~~ 504 (526)
+..|.+.+++.++..+.
T Consensus 162 ~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 162 RACYLFLLLLGAGVTFS 178 (394)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888776655544433
No 204
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.22 E-value=7.2e-10 Score=107.89 Aligned_cols=167 Identities=17% Similarity=0.215 Sum_probs=129.1
Q ss_pred HHhhhhhhhhcchhhhhhhcC-CccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccc
Q 009757 110 LCNADRVVMSVAIVPLSLAHG-WSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTS 188 (526)
Q Consensus 110 ~~~~~~~~~~~~~~~l~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 188 (526)
+.......+....+.+.++.| .+....|.+.++..+.-.+.-...+++..|+|.|+++.++.+..++=..+++... ++
T Consensus 218 l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~-~~ 296 (400)
T PF03825_consen 218 LIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS-DP 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 334444445555566677777 6777788888888888889999999999999999999999999999888877762 23
Q ss_pred hHHH----HHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHh-hhhhHHHHHHHHHHHHHhhcCch------hH
Q 009757 189 LLAL----LAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMG-GFTSGNAIGLVLSPILMSQAGIF------GP 257 (526)
Q Consensus 189 ~~~l----~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~ig~~l~~~l~~~~gw~------~~ 257 (526)
.+.. ++...++|+..+..+.+...++.+..|++.|+++.++++. ..++|..+|..++|++.+++|-+ ..
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~ 376 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV 376 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 3332 3335679999999999999999999999999999999876 46899999999999999987644 45
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 009757 258 FVIFGLSGFLWVLVWLSATS 277 (526)
Q Consensus 258 f~~~~~~~~~~~~~~~~~~~ 277 (526)
+.+.+++.++..++..++.+
T Consensus 377 ~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 377 FLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHHHHHHHHHhhcc
Confidence 55566655555555444433
No 205
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.21 E-value=2.7e-09 Score=97.52 Aligned_cols=363 Identities=12% Similarity=0.031 Sum_probs=210.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHh-----HhcChHHHHH-H
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-----YYGGKIIMAW-G 170 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~~-~ 170 (526)
....+..+.+.+.+++...+... .+|.+.+.-|.|.++.+...-+ +..+ ..-++|.++.| |+||||.-++ +
T Consensus 29 d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~a-y~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFA-YWPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhh-hhHH-HHHHHHHhhhHHHHHHhhccccceeeeh
Confidence 34456666778888888888888 8999999888888887654332 2232 33678899999 9999985432 2
Q ss_pred HHHHHHHHhhhhhcc---------ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHH
Q 009757 171 VALWSLATFLTPWAA---------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIG 241 (526)
Q Consensus 171 ~~~~~~~~~~~~~~~---------~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig 241 (526)
..+.+..+.+.+.-. .++...+...-++.-+..+....+...+.-....+++.|.+......+.+.|.++|
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 222222222222211 13334444455667777888889999999999999999999988888888888887
Q ss_pred HHHHHHHHh-------hcCch---------hHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccC
Q 009757 242 LVLSPILMS-------QAGIF---------GPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMG 305 (526)
Q Consensus 242 ~~l~~~l~~-------~~gw~---------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (526)
..+.-.+-. ..+|. ..+++.+.+.++...+..+..+|.+++.. + +
T Consensus 186 ~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~----~---------------e 246 (510)
T KOG3574|consen 186 NVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVD----E---------------E 246 (510)
T ss_pred cceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhh----h---------------h
Confidence 765433322 11222 23455566666665555555555443311 0 0
Q ss_pred CCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHH
Q 009757 306 NKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (526)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (526)
.+...+...+-++++++-|.+..+.......-.++.+-....+.-+.| +|.+..+.+++..+..-.+++.....|++..
T Consensus 247 ~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta 325 (510)
T KOG3574|consen 247 LELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTA 325 (510)
T ss_pred hhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecC
Confidence 111111223356678888888888888787788888888888888888 7999999887765444444444444443322
Q ss_pred HHHhhcCccchhHHHHHHHHHHHHHHHH-HhhccCch-----h-HHHHHHH---HHHHHHHhhhhhhHHHHHHhhc-ccc
Q 009757 386 MLIQRGTSVTLTRKILQSIGFIAPGIAL-IGLTAAKS-----P-VMASAWL---TLAIGMKSFSHSGFLVNLQEIA-PQY 454 (526)
Q Consensus 386 r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~ 454 (526)
. ++...+..+....-+........+ ........ + ...+..+ .+..++.........+.-+.+. |..
T Consensus 326 ~---~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~i 402 (510)
T KOG3574|consen 326 G---PRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAI 402 (510)
T ss_pred C---CCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccc
Confidence 1 111111111111111111111111 11111111 1 1111111 1111221111222223333444 478
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHhhhccccc
Q 009757 455 SGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 455 ~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g 485 (526)
.|+.+.+.|+..++|+-.-..+..++.|..+
T Consensus 403 ggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 403 GGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred CccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 9999999999999999988888889988543
No 206
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.21 E-value=4.4e-10 Score=109.19 Aligned_cols=134 Identities=17% Similarity=0.083 Sum_probs=108.2
Q ss_pred hhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh-cChHHHHHHHHHHHHHHhhhhhccccchHHHHHH
Q 009757 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFLTPWAADTSLLALLAM 195 (526)
Q Consensus 117 ~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (526)
.....+|.+.++.|.+..+.+.+.+...++..++.++.|++.||+ +||+.+.++.++.+++.+++.+. ++.+... .
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~ 291 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFA--PMHGLWA-W 291 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHh--hhhHHHH-H
Confidence 344456777778899999999999999999999999999999999 56777778888888877776665 3333222 4
Q ss_pred HHHhhhhccchhhhhHHHHhhhcC-cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Q 009757 196 RAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (526)
Q Consensus 196 r~l~Gig~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g 253 (526)
-++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+++.++.|
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 567899999988888777766554 5667889999998899999999999999998776
No 207
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.20 E-value=2.7e-10 Score=106.43 Aligned_cols=174 Identities=17% Similarity=0.114 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhh-hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh
Q 009757 101 VSMLALALALCNADRVVMSVAIVP-LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 179 (526)
.+.+++.|+..+.....++..+|. +.++|+.++.+.|...+.+.+...+..+.+|+++||+|.+|++.+....++++..
T Consensus 220 ~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~ 299 (417)
T COG2223 220 TWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAA 299 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHH
Confidence 344555566555555566666665 4567999999999999999999999999999999999999999999999998888
Q ss_pred hhhhccc-----cchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-
Q 009757 180 LTPWAAD-----TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG- 253 (526)
Q Consensus 180 ~~~~~~~-----~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g- 253 (526)
+..+..+ .+....++.-+..++..|.-......++..++| ++-|.+.|+.....++|...-|..-+...+..|
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 7766531 233443333333444444444456777888885 588999999999999999999999888888777
Q ss_pred chhHHHHHHHHHHHHHHHHHhh
Q 009757 254 IFGPFVIFGLSGFLWVLVWLSA 275 (526)
Q Consensus 254 w~~~f~~~~~~~~~~~~~~~~~ 275 (526)
+...|++.....+++.+..+..
T Consensus 379 ~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 379 YTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999988888877765544
No 208
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.20 E-value=9.7e-10 Score=109.68 Aligned_cols=156 Identities=17% Similarity=0.079 Sum_probs=100.7
Q ss_pred hhcchhhhh-hhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhh--hccccchHHHHH
Q 009757 118 MSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP--WAADTSLLALLA 194 (526)
Q Consensus 118 ~~~~~~~l~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 194 (526)
+...+|.+. +++|.+..+.++..++..+...++.++.|+++||+|||+.+.++.++.++...... ....++.+..+.
T Consensus 262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 262 FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 344456554 56899998999999988888899999999999999999988776665443332111 111123332222
Q ss_pred HHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhh-HHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHH
Q 009757 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTS-GNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLVW 272 (526)
Q Consensus 195 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~ 272 (526)
.-.+.+++.+...+....++.|++|++.|+.+.|+.....++ +....|.+.+.+ +..| |...++..++..++..+..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~ 420 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVS 420 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHH
Confidence 222233333444456678899999999999999998766554 344477777755 4445 5555665555555554444
Q ss_pred Hh
Q 009757 273 LS 274 (526)
Q Consensus 273 ~~ 274 (526)
++
T Consensus 421 ~~ 422 (432)
T PRK10406 421 LM 422 (432)
T ss_pred HH
Confidence 43
No 209
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.20 E-value=1.5e-09 Score=107.44 Aligned_cols=155 Identities=14% Similarity=0.032 Sum_probs=110.1
Q ss_pred HHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCc
Q 009757 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (526)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (526)
.....-+|.+.++ +|.+....++..+.+.++..++.++.|+++||+||| ..+..+..+..+..+.....+
T Consensus 33 ~~~~p~l~~i~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr---------~~l~~~~~~~~~~~~~~~~a~ 102 (413)
T PRK15403 33 DLIQPGIINVVRD-FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR---------PVLITGALIFTLACAATLFTT 102 (413)
T ss_pred HhhccCHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch---------HHHHHHHHHHHHHHHHHHHcC
Confidence 3334445554444 899999999999999999999999999999999999 233334444444444444455
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHH
Q 009757 421 SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYF 499 (526)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 499 (526)
+.+..++.-++.+...+...+.......+..| ++++++.++.+....++..++|.+++.+.++.| |+..|++.+++.+
T Consensus 103 ~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f~~~~~~~~ 181 (413)
T PRK15403 103 SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLFAIIAVMGL 181 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHH
Confidence 55544444333222223334444566777776 578999999999999999999999999988877 8999988887776
Q ss_pred HHHHHHH
Q 009757 500 LSALFYI 506 (526)
Q Consensus 500 ~~~~~~~ 506 (526)
++.+..+
T Consensus 182 i~~~~~~ 188 (413)
T PRK15403 182 IAFVGLL 188 (413)
T ss_pred HHHHHHH
Confidence 6655433
No 210
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.19 E-value=3.4e-10 Score=106.33 Aligned_cols=271 Identities=15% Similarity=0.117 Sum_probs=159.4
Q ss_pred HHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhH----hcChHHH-HHHHHHHHHHHhhhh
Q 009757 108 LALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKIIM-AWGVALWSLATFLTP 182 (526)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~l-~~~~~~~~~~~~~~~ 182 (526)
.+...+.+..-....+++.++.|++....+.+-....+...+.+++.|..+|| |||||.+ ..+.+..+++.++..
T Consensus 41 a~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig 120 (498)
T KOG0637|consen 41 AAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIG 120 (498)
T ss_pred HHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhh
Confidence 33333444445556788889999999999999999999999999999999995 7887754 456666677777777
Q ss_pred hccccc-----------------hHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhH-HHHHHHhhhhhHHHHHHHH
Q 009757 183 WAADTS-----------------LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERAR-AVAIAMGGFTSGNAIGLVL 244 (526)
Q Consensus 183 ~~~~~~-----------------~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~ig~~l 244 (526)
++ .+ ...++++--+.=++.-.....+.+++.|...++++.+ +++++....++|..+|..+
T Consensus 121 ~a--aDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~ 198 (498)
T KOG0637|consen 121 YA--ADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYAL 198 (498)
T ss_pred hH--hhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeec
Confidence 66 22 2234444445555666778889999999998777666 9999999999999999988
Q ss_pred HHHHHhhcCchhH--HHH-------HHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCC-
Q 009757 245 SPILMSQAGIFGP--FVI-------FGLSGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVI- 314 (526)
Q Consensus 245 ~~~l~~~~gw~~~--f~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 314 (526)
++++ +|+-. |.. ++..-...+.-.-+...++-.......+.+......+ .+.+..+....
T Consensus 199 g~y~----~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~------~~~~~~~~~~~~ 268 (498)
T KOG0637|consen 199 GSYL----GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTT------ARSKSSKLPFLL 268 (498)
T ss_pred cccc----CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCccc------ccccccCcchHH
Confidence 8743 44322 222 2211111111111111111110000000000000000 00000000000
Q ss_pred chHHHHHc-CchHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HhcCCcch----------------hhhHhhHhHHHHHHH
Q 009757 315 PPFRRLLS-KMPTWSIIVANAMHSWGFFVILSWMPIYFNF-VYHIDLRQ----------------ASWFSAVPWSVMAFT 376 (526)
Q Consensus 315 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~----------------~~~~~~~~~~~~~i~ 376 (526)
+....+.+ .+..+.+++...+...+.+.+..|...++-+ .++-++.. -.+=+.+..+...+-
T Consensus 269 e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~ 348 (498)
T KOG0637|consen 269 EIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIY 348 (498)
T ss_pred HHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHH
Confidence 11112222 3567888888888888888887777777644 34433322 123344555666777
Q ss_pred HHHHHHHHHHHHhh
Q 009757 377 GYLGGLLSDMLIQR 390 (526)
Q Consensus 377 ~~~~g~l~dr~~~~ 390 (526)
+...-++.+|+|.|
T Consensus 349 S~~~~~l~~~~g~r 362 (498)
T KOG0637|consen 349 SLLVEKLSRKFGTR 362 (498)
T ss_pred HHHHHHHHHhcCcc
Confidence 78888888888855
No 211
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.19 E-value=3.3e-08 Score=94.05 Aligned_cols=324 Identities=12% Similarity=0.086 Sum_probs=178.6
Q ss_pred hhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHh
Q 009757 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVA 215 (526)
Q Consensus 136 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~ 215 (526)
.+.+.-+-.+...+..+.+-++.+|+..+.=..+..++..++.++.+++ ++.+.=+++-++.+++.|........+..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~--~~v~~~l~Gv~las~ssg~GE~tfL~lt~ 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS--PSVWVRLLGVVLASLSSGLGEVTFLSLTH 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec--cchhHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 3456667777888888888999999987766677777888899999998 89999889999999999987777777644
Q ss_pred hhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc--hhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHH
Q 009757 216 RWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI--FGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEY 293 (526)
Q Consensus 216 ~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (526)
.+++ ...+-++++.+.++++|+..-..+.+ .|+ |..+++...+.++..+..++..+.++...+..+.++...
T Consensus 139 -~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~ 212 (402)
T PF02487_consen 139 -FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDE 212 (402)
T ss_pred -hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCc
Confidence 5543 35788889999999999888776665 554 777888777776666666666654433222111111000
Q ss_pred HHHhcccccccCCCCCCCCCCchHHHHHc-CchHHHHHHHHHHHHHHHHHHHH-hHHHHHH-HHhcCCcchhhhHhhHhH
Q 009757 294 ILREKQKPLLMGNKHKPATVIPPFRRLLS-KMPTWSIIVANAMHSWGFFVILS-WMPIYFN-FVYHIDLRQASWFSAVPW 370 (526)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~ 370 (526)
..++.... +....+.+......+++-++ -|..+..++-.+..++..+.++. ..+...- ....-...+..+....+.
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ 291 (402)
T PF02487_consen 213 AEDDLLES-ETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQ 291 (402)
T ss_pred cccccccc-ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHH
Confidence 00000000 00011111112222322222 12222233333444444444332 2222221 111111233445555555
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHH---HhhccCchhHHHHHHHHH-HHHHHhhhhhhHHHH
Q 009757 371 SVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIAL---IGLTAAKSPVMASAWLTL-AIGMKSFSHSGFLVN 446 (526)
Q Consensus 371 ~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 446 (526)
++..+++--...+ |+ | +.++..+.-.+-.+.+ ..+.+.++.|..++.++. |...+..+......+
T Consensus 292 ~GVFISRSS~~~~--ri--r-------~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I 360 (402)
T PF02487_consen 292 LGVFISRSSLPFF--RI--R-------RLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRI 360 (402)
T ss_pred HHHhhhhcceeee--eh--h-------hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 6655555332222 22 1 1111111111111111 112233455555444444 444444444555666
Q ss_pred HHhhcccchhhHHHHHHHHHhHHHHHHHHHHhh
Q 009757 447 LQEIAPQYSGVLHGISNTAGTFAAILGTVGAGF 479 (526)
Q Consensus 447 ~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~ 479 (526)
..+..+++|..++|.......+|..++..++-.
T Consensus 361 ~~~~~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 361 SEEVPPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred HhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 667777899999999998888888877766543
No 212
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.19 E-value=1.8e-09 Score=105.85 Aligned_cols=146 Identities=12% Similarity=0.047 Sum_probs=97.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHH
Q 009757 323 KMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQ 402 (526)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~ 402 (526)
+|.++...+...+.+...+.+....+.+-++.+|+|..+.+++.++..++..+.++..|++.||+|.| ...
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R---------~v~ 103 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR---------RWT 103 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHH
Confidence 34566666666666666666666666666645999999999999999999999999999999999998 233
Q ss_pred HHHHHHHHHHHHhhccC-----chhHHHHHH-HHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHH
Q 009757 403 SIGFIAPGIALIGLTAA-----KSPVMASAW-LTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTV 475 (526)
Q Consensus 403 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~ 475 (526)
..+.+...+..+..... ++.+..++. ++.+.+ +...+.....+++.+| ++||++.|+....+++|..++++
T Consensus 104 ~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig--g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 104 VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA--GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH--HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHH
Confidence 33333333333333322 344433333 333332 4455556666777777 68999999997777777766655
Q ss_pred HHhh
Q 009757 476 GAGF 479 (526)
Q Consensus 476 ~~g~ 479 (526)
+...
T Consensus 182 l~p~ 185 (462)
T PRK15034 182 VAPL 185 (462)
T ss_pred HHHH
Confidence 5544
No 213
>TIGR00898 2A0119 cation transport protein.
Probab=99.19 E-value=2e-10 Score=117.35 Aligned_cols=137 Identities=20% Similarity=0.142 Sum_probs=108.5
Q ss_pred HHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcC
Q 009757 140 QSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP 219 (526)
Q Consensus 140 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~ 219 (526)
..+..+...++.++.+++.||+|||+.+.++.++.+++.++..+....+.+..++.-++.+++.+...+....+..|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 34455667788889999999999999999999999988887777622222555566677777777778888999999999
Q ss_pred cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhccCC
Q 009757 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (526)
Q Consensus 220 ~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 279 (526)
++.|+.++|+.+....+|.+++|.+.+ + ...++..++++.++..++..++.++ .||+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet 497 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPET 497 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCC
Confidence 999999999999999999999999988 4 4456777888888777776665544 4544
No 214
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.18 E-value=1.1e-09 Score=95.31 Aligned_cols=357 Identities=13% Similarity=0.069 Sum_probs=186.4
Q ss_pred hhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHH
Q 009757 115 RVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLA 194 (526)
Q Consensus 115 ~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 194 (526)
...-+|..-.+.+.+|....++|.+.-+..-..++...+.|.++|+-|||+.-+.-++.+.++++- -.+ +.|-.+++
T Consensus 53 DWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhS--pqYkVLmV 129 (454)
T KOG4332|consen 53 DWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHS--PQYKVLMV 129 (454)
T ss_pred hhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcC--CceEEEee
Confidence 345667777788889999999999998888888999999999999999999877666666665543 344 88999999
Q ss_pred HHHHhhhhccchhhhhHHHH-hhhcCcchhhHHHHHHHh--------hhhhHHHHHHHHHHHHHhhc--CchhHHHHHHH
Q 009757 195 MRAVVGLAEGVALPAMNNMV-ARWFPQTERARAVAIAMG--------GFTSGNAIGLVLSPILMSQA--GIFGPFVIFGL 263 (526)
Q Consensus 195 ~r~l~Gig~g~~~~~~~~~i-~~~~~~~~r~~~~~~~~~--------~~~~G~~ig~~l~~~l~~~~--gw~~~f~~~~~ 263 (526)
+|.+-|+..+..+.+..++. .|.- ++|+.-.-|... +..+-.+++.+.+..+.+.+ |.-.+|-..+.
T Consensus 130 GR~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAac 207 (454)
T KOG4332|consen 130 GRVLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAAC 207 (454)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHH
Confidence 99999999998888777754 4443 344333222222 22233344444445555544 44556655544
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCChhHHHHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHH
Q 009757 264 SGFLWVLVWLSATSSTPDRHPQISKYELEYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVI 343 (526)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (526)
+..+...+.+.-..|.-.+ +.|.+.... ......+.+..++++.++..+..+.-...+.+
T Consensus 208 fLaigmAvil~~W~ENygd-----ps~~kdllt---------------qf~gaa~aiaSD~ki~LLG~iqsLFE~smytF 267 (454)
T KOG4332|consen 208 FLAIGMAVILSSWSENYGD-----PSENKDLLT---------------QFKGAARAIASDEKIALLGAIQSLFEGSMYTF 267 (454)
T ss_pred HHHHHHHHHHhhhhhccCC-----hhhhHHHHH---------------HhhHhHHHHhcchHHHHHHHHHHHHhhhhhee
Confidence 4433333332222221111 111111110 01122335566677666655555544444433
Q ss_pred -HHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccC---
Q 009757 344 -LSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA--- 419 (526)
Q Consensus 344 -~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 419 (526)
..|.|..--+..+ .--|++++.+.+++++|+-+..++..|-..+ .-....+...+......+.++.....
T Consensus 268 VFLWTPaLspn~e~---iPhGfiFatFMlASmLGSSla~Rl~s~s~~~---ve~ymqivf~vs~a~l~Lpilt~~vsP~k 341 (454)
T KOG4332|consen 268 VFLWTPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLLSRSSPK---VESYMQIVFLVSIAALLLPILTSSVSPSK 341 (454)
T ss_pred eeeecccCCCCccc---CCchhHHHHHHHHHHHhhHHHHHHHhcCCcc---cchHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 3344432211112 2246777777777777776665555543322 11111111111111111111111111
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc-hhHHHHHHHHHH
Q 009757 420 KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG-SFQGFLLLTSLL 497 (526)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g-~~~~~~~~~~~~ 497 (526)
.++...+..++..-...+..+|...-+-....| +.|++.+..+..--++-..++-... =.+... .-+..|-++...
T Consensus 342 es~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynl--h~~~~p~~tr~mf~icS~~ 419 (454)
T KOG4332|consen 342 ESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL--HVDAFPTTTRNMFGICSAF 419 (454)
T ss_pred CCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec--ccccCccccchhhhhhHHH
Confidence 122333333444334455556666655556666 5788766665444343333322110 011110 134566666666
Q ss_pred HHHHHHH
Q 009757 498 YFLSALF 504 (526)
Q Consensus 498 ~~~~~~~ 504 (526)
..++.+.
T Consensus 420 ~~~a~i~ 426 (454)
T KOG4332|consen 420 LFVASIL 426 (454)
T ss_pred HHHHHHH
Confidence 6555443
No 215
>PRK09848 glucuronide transporter; Provisional
Probab=99.15 E-value=1.1e-09 Score=110.00 Aligned_cols=136 Identities=19% Similarity=0.144 Sum_probs=108.3
Q ss_pred hcchhhhhh-hcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHH
Q 009757 119 SVAIVPLSL-AHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRA 197 (526)
Q Consensus 119 ~~~~~~l~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 197 (526)
....|.+.+ .+|.++...++......++..++.++++++.||+|+|+++.++.++.+++.++..+....+++.+++..+
T Consensus 248 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 327 (448)
T PRK09848 248 SASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALA 327 (448)
T ss_pred hhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHH
Confidence 334454443 4676655555555555677888999999999999999999999999888887776653346777778888
Q ss_pred HhhhhccchhhhhHHHHhhhcCcc-------hhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 198 VVGLAEGVALPAMNNMVARWFPQT-------ERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 198 l~Gig~g~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
+.|+|.+...+...++..|..|.+ ++|...++.+....+|..+|+.+.+.+.+..|+
T Consensus 328 l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 328 IASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999988754 358999999999999999999999988876665
No 216
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.15 E-value=7.6e-10 Score=107.91 Aligned_cols=185 Identities=16% Similarity=0.113 Sum_probs=139.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHH
Q 009757 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLA 177 (526)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 177 (526)
+.....+.+......-+.+........+.++-|++..+..+......+...+..+++..+.||+|||+.++++..++.+.
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 33333333333333444455566667788889999999999999999999999999999999999999999999999988
Q ss_pred Hhhhhhcc--ccch--HH---HHHHHHHhhhhcc-chhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHH
Q 009757 178 TFLTPWAA--DTSL--LA---LLAMRAVVGLAEG-VALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (526)
Q Consensus 178 ~~~~~~~~--~~~~--~~---l~~~r~l~Gig~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 249 (526)
.+++.... .... |. .+++.++..++.+ +..|...-+.+|.+|++.|..+.++......+...+-......+.
T Consensus 349 ~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~ 428 (485)
T KOG0569|consen 349 LLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQ 428 (485)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87765541 0111 11 2333333333333 236788899999999999999999999999999888888888887
Q ss_pred hhcCchhHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 009757 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRH 283 (526)
Q Consensus 250 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (526)
+.+|- ..|++..+.+++..+..++..||++.+.
T Consensus 429 ~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 429 NVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 77776 7888888888888888999998876443
No 217
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.13 E-value=8e-09 Score=101.92 Aligned_cols=146 Identities=10% Similarity=0.063 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHH
Q 009757 326 TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (526)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (526)
++.+++..+...+........+|.+ ++.+|.+..+.+++.+...++..++++..|++.||+|+| ..+..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r---------~~~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK---------AGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHH
Confidence 4455566666666665556777766 455899999999999999999999999999999999998 334444
Q ss_pred HHHHHHHHHhhc---cCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhc
Q 009757 406 FIAPGIALIGLT---AAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (526)
Q Consensus 406 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~ 481 (526)
.++.++..+... ..++.+..+...++.....+...+....+..+..| +++++..++.+....+|..++|.+.+.+.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444443322 12344444444333333334444444555555555 68999999999999999999999998875
No 218
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.13 E-value=1.3e-09 Score=102.04 Aligned_cols=147 Identities=16% Similarity=0.176 Sum_probs=127.3
Q ss_pred hhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhh
Q 009757 123 VPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLA 202 (526)
Q Consensus 123 ~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig 202 (526)
..-..++|++..++..+.-...+..+++++++|+|.||+|.|+++.++.++..+.++...+. ..-..+.++-.+.|..
T Consensus 277 ~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~--~~~~~f~i~gll~g~s 354 (438)
T COG2270 277 VFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL--EGELDFWILGLLVGTS 354 (438)
T ss_pred HHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc--cccHHHHHHHHHHHHh
Confidence 34455899999999999999999999999999999999999999999999999988877776 6666777888999999
Q ss_pred ccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHH
Q 009757 203 EGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG-IFGPFVIFGLSGFLWVLV 271 (526)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~ 271 (526)
.|..+..+.++..+..|+++-++.+|+++.....+..+||.+.+.+.+..| -|..+....++..+.+++
T Consensus 355 ~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 355 LGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred cchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 999999999999999999999999999999999999999999999887554 666666655554444433
No 219
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.10 E-value=1.4e-09 Score=122.59 Aligned_cols=143 Identities=17% Similarity=0.193 Sum_probs=121.7
Q ss_pred hhhhhhcCCccc-hhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhh
Q 009757 123 VPLSLAHGWSRS-FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGL 201 (526)
Q Consensus 123 ~~l~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gi 201 (526)
+.+.+.+|.+.. +.|++.+...++.+++.++.|++.||+++|+.+.++.++.+++.++..+. .+.+.++++.++.|+
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--PSLASVLVLFFLFGF 334 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHH
Confidence 344566899998 99999999999999999999999999999999999988888888888877 788888899999999
Q ss_pred hccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh-hcCchhHHHHHHHHHHH
Q 009757 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS-QAGIFGPFVIFGLSGFL 267 (526)
Q Consensus 202 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~~gw~~~f~~~~~~~~~ 267 (526)
+.+...+...+++.+..|+++|++++++.+....+|.++++.+++.+.. .+++...|++.+.+.++
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 9999899999999999999999999999999999999888888876654 23455566655554433
No 220
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.10 E-value=1.1e-08 Score=98.63 Aligned_cols=158 Identities=12% Similarity=0.028 Sum_probs=111.7
Q ss_pred HHHhHHHHHHHHhcCCcch-hhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCch
Q 009757 343 ILSWMPIYFNFVYHIDLRQ-ASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKS 421 (526)
Q Consensus 343 ~~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (526)
...+...++.+.+|++..+ .|.+.+.+..+..+..+.+|++.||+|.| .++..+.+.-++...+..+.++
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K---------~vL~l~~l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK---------PVLVLQALSFVCVWLLLLLGTS 114 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666669999999 99999999999999999999999999998 4455555555555555555555
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc--hhHHHHHHHHHHH
Q 009757 422 PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG--SFQGFLLLTSLLY 498 (526)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~ 498 (526)
...+.+.-++.+...+... ....++....| ++|+++.|+.++...+|.++++++.+++. ..| .|....++.....
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~ 192 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHH
Confidence 5554444444444444444 55555665555 79999999999999999999999999944 444 3444555555555
Q ss_pred HHHHHHHHHHhcC
Q 009757 499 FLSALFYIIFSTG 511 (526)
Q Consensus 499 ~~~~~~~~~~~~~ 511 (526)
.+++++.+++++.
T Consensus 193 ~~a~~~a~~LP~~ 205 (511)
T TIGR00806 193 TFSVFLALFLKRP 205 (511)
T ss_pred HHHHHHHHhCCCC
Confidence 6666666666543
No 221
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.08 E-value=1.3e-09 Score=110.01 Aligned_cols=173 Identities=14% Similarity=0.074 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhh-hhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHH--------HHHHH
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLS-LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKII--------MAWGV 171 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~--------l~~~~ 171 (526)
+....+..+........+...+|.+. +.+|.+..+.|++.++..++..++.++.|+++||+++|+. +..+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 342 (465)
T TIGR00894 263 VWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGI 342 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 33444444444444445555566654 5689999999999999999999999999999999875421 11111
Q ss_pred HHH--HHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHH
Q 009757 172 ALW--SLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (526)
Q Consensus 172 ~~~--~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 249 (526)
... ++..+..... ..+.+..+++-.+.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.+.
T Consensus 343 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~ 420 (465)
T TIGR00894 343 GGLGPGIFAYALPYL-SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNIL 420 (465)
T ss_pred HHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 111 1111111121 1344444445555555555555555555667775 58999999999999999999999999887
Q ss_pred hhc---CchhHHHHHHHHHHHHHHHHHhh
Q 009757 250 SQA---GIFGPFVIFGLSGFLWVLVWLSA 275 (526)
Q Consensus 250 ~~~---gw~~~f~~~~~~~~~~~~~~~~~ 275 (526)
+.. +|+..|.+.++..++..++..+.
T Consensus 421 ~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 421 SQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 643 38888988887777766555443
No 222
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=99.07 E-value=5.2e-09 Score=94.57 Aligned_cols=365 Identities=12% Similarity=0.074 Sum_probs=226.2
Q ss_pred cCCccchhh-HHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchh
Q 009757 129 HGWSRSFSG-IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVAL 207 (526)
Q Consensus 129 ~~~s~~~~g-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~ 207 (526)
.+++..++. -+.=...-.+.+.-++.=.+.|-.-.|+++++-.+.......+.-+. ++.+.+=+.-++.|...+. .
T Consensus 36 ~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g--~sV~~mQvlE~FyG~~tAa-E 112 (433)
T KOG3810|consen 36 KNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFG--PSVKAMQVLEFFYGPATAA-E 112 (433)
T ss_pred CCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhc--CCchheeeehhhcChHHHH-H
Confidence 355554432 22223334445555566678999999999988877777778888888 8999998999999998665 7
Q ss_pred hhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC--chhHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 009757 208 PAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG--IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQ 285 (526)
Q Consensus 208 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (526)
.+.++++-...+++++.++.+...+..-.|...|..++..+++... +...=.+.-....+.. ..-.++|..+++.-.
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~-~~A~fLP~v~rSl~f 191 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAV-LLALFLPRVKRSLYF 191 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHH-HHHhhCCCCchhhhh
Confidence 7889999999999999999999999999999999999999876433 3322222222222222 233334444422111
Q ss_pred CChhHHHHHHHhcccccccCCCCCCC--------CCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh-c
Q 009757 286 ISKYELEYILREKQKPLLMGNKHKPA--------TVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVY-H 356 (526)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g 356 (526)
..+++ +....+.++. ..+.+.. ..+.++++..+||+++...+-+.+...+++.+..+....-++.. .
T Consensus 192 ~~~~~-~~~v~~~e~~---~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~ 267 (433)
T KOG3810|consen 192 HRLED-KISVGDLEEM---NPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPN 267 (433)
T ss_pred hcccc-cceeccchhc---CccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCC
Confidence 11111 0000111000 0000000 11224455667898888888888888888888888888777742 1
Q ss_pred CCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHH
Q 009757 357 IDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMK 436 (526)
Q Consensus 357 ~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (526)
-....-|..=++..+.++++.+..|.+.-.+.|. +..++.++.+..+..++.+....+.|+..+..++.....
T Consensus 268 ~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y 340 (433)
T KOG3810|consen 268 PANVYNGAVEAVSTLLGAIAALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIY 340 (433)
T ss_pred chhhhcCHHHHHHHHHHHHHHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhH
Confidence 1112234555666677778888888886555554 345666666677767777777777777777666554444
Q ss_pred hhhhh-hHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccc----------hhHHHHHHHHHHHHHHHHHH
Q 009757 437 SFSHS-GFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVG----------SFQGFLLLTSLLYFLSALFY 505 (526)
Q Consensus 437 ~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g----------~~~~~~~~~~~~~~~~~~~~ 505 (526)
.+..+ ....+..++..|.-|-.+|+...+.-+-..+ +.-...|..| -|..-|++.+++.+++..+.
T Consensus 341 ~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsi---lT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~ 417 (433)
T KOG3810|consen 341 QLTITIATFQIARNLSSELFGLVFGINTFVALILQSI---LTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIE 417 (433)
T ss_pred hhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHh---heEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHH
Confidence 44333 3344555666678888888877665544443 3333445322 24556777777777776654
Q ss_pred HHHhcC
Q 009757 506 IIFSTG 511 (526)
Q Consensus 506 ~~~~~~ 511 (526)
....++
T Consensus 418 ~~~~~~ 423 (433)
T KOG3810|consen 418 YLMCRR 423 (433)
T ss_pred HHHhhc
Confidence 444333
No 223
>PRK10133 L-fucose transporter; Provisional
Probab=99.07 E-value=2e-08 Score=99.99 Aligned_cols=146 Identities=10% Similarity=0.002 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHH
Q 009757 326 TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (526)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (526)
+..+.+.++...+.........|.+ ++.+|.+..+.++..+...++..++.++.|++.||+|+| ..+..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r---------~~l~~g 97 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK---------AGIITG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHH
Confidence 4555666666677777777888887 666999999999999999999999999999999999999 334444
Q ss_pred HHHHHHHHHhh---ccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhccc-chhhHHHHHHHHHhHHHHHHHHHHhhhc
Q 009757 406 FIAPGIALIGL---TAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ-YSGVLHGISNTAGTFAAILGTVGAGFFV 481 (526)
Q Consensus 406 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~lg~~~~~~~~g~l~ 481 (526)
.....+..+.. ...++.+......++.+...+...........+..|+ +++...++.+....+|..+++.+++.+.
T Consensus 98 ~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 98 LFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444332 2344555554444443434444555555556677775 5556789999999999999998877654
No 224
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.06 E-value=5.9e-09 Score=105.17 Aligned_cols=139 Identities=14% Similarity=-0.010 Sum_probs=107.7
Q ss_pred hhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhh---ccccchHHH
Q 009757 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPW---AADTSLLAL 192 (526)
Q Consensus 116 ~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~l 192 (526)
.......+.+.+....+....+++.+...++..++.+++++++||+|+|+.+.++.++..++.+...+ ...++.+.+
T Consensus 248 ~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (473)
T PRK10429 248 NIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLI 327 (473)
T ss_pred HHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHH
Confidence 34444445555554445667778888878899999999999999999999999888876666554432 222567777
Q ss_pred HHHHHHhhhhccchhhhhHHHHhhhcC-------cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 193 LAMRAVVGLAEGVALPAMNNMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 193 ~~~r~l~Gig~g~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
++.-++.|++.+...+...++++|..| .++.|..++.......+|..+++.+.+++.+..|+
T Consensus 328 ~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 328 VIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 788889999999999999999999965 33456689999999999999999999999876665
No 225
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.05 E-value=2e-10 Score=108.30 Aligned_cols=174 Identities=13% Similarity=0.041 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHH
Q 009757 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFI 407 (526)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 407 (526)
.+++...+...-.+.+...++.. ++.++.+....|++.....+...+.++++|++.||+.|+ .++.++..
T Consensus 37 il~~vnlmny~Dr~~iagv~~~v-~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~---------~v~~vG~~ 106 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKEV-QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK---------RVIAVGIF 106 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHHH-HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc---------eEEeeHHH
Confidence 34444444444444444433333 344899999999999999999999999999999999998 33444444
Q ss_pred HHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccch
Q 009757 408 APGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGS 486 (526)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~ 486 (526)
+-.+..+.-.+....|.+.++=.+.+..-....+....++++.+| ++|++++++.+.....|..+|-..++.+.++.+.
T Consensus 107 iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 107 IWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 444444444444666666666555555556667888888999998 5999999999999999999999999999999888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC
Q 009757 487 FQGFLLLTSLLYFLSALFYIIFSTG 511 (526)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (526)
|++.|...+++.++..++.+++.+.
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccC
Confidence 9999999999988877776665443
No 226
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.05 E-value=4.6e-09 Score=104.69 Aligned_cols=151 Identities=16% Similarity=0.095 Sum_probs=123.5
Q ss_pred HHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhc
Q 009757 105 ALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (526)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 184 (526)
.+..++............+++.++.--++...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~ 310 (428)
T PF13347_consen 231 LLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFL 310 (428)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHH
Confidence 33344444444455555666666543344678888899999999999999999999999999999999999999998888
Q ss_pred cccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCc-------chhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCch
Q 009757 185 ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIF 255 (526)
Q Consensus 185 ~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~ 255 (526)
..++.+.+++.-++.|++.+..++...++++|..+. ++.|..++..+....+|..+++.+.+.+.+..|+.
T Consensus 311 ~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 311 GPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 323899999999999999999999999999999873 34588999999999999999999999887766543
No 227
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.05 E-value=1.8e-09 Score=98.44 Aligned_cols=131 Identities=18% Similarity=0.189 Sum_probs=100.8
Q ss_pred HHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHH--HHHHHHHhhhhccchhhhhHHHHhhhcCc
Q 009757 143 FLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLA--LLAMRAVVGLAEGVALPAMNNMVARWFPQ 220 (526)
Q Consensus 143 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~--l~~~r~l~Gig~g~~~~~~~~~i~~~~~~ 220 (526)
..+.-..|.++.+++.||+|||++|..+.+++++..++.....++|... ++.+|++.. +.+.+.+.|..|.+|.
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis----g~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS----GAFQVAYVYTPEVYPT 465 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh----chheEEEEecCcccch
Confidence 3455677889999999999999999999999999988877764344332 444565543 3466778899999999
Q ss_pred chhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhccCC
Q 009757 221 TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSATSST 279 (526)
Q Consensus 221 ~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 279 (526)
.-|+...|..+....+|.++.|.++ +....+-..+..+.+.+.++..+...++.-|+
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999999999999999999999998 43334455566677777777777666665444
No 228
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.04 E-value=6.7e-09 Score=91.26 Aligned_cols=172 Identities=14% Similarity=0.064 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHH-H
Q 009757 98 VKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWS-L 176 (526)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~-~ 176 (526)
.+++.++++.+....+.....+ ...+.+.+|+|+...+-+.+......++.+++.|.++||+|++...+.+..+.. +
T Consensus 266 fw~~~iicv~yyva~fPFi~lg--~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~ 343 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWFPFITLG--PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLL 343 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhhh--HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHH
Confidence 4555666666655554433333 235678899999999999999888899999999999999999987766555444 4
Q ss_pred HHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC---
Q 009757 177 ATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG--- 253 (526)
Q Consensus 177 ~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g--- 253 (526)
+-....|+ ++.=+.+..+.|+............++...|+++.|.+.+..+...++|..+.|++++.+.+.-|
T Consensus 344 ~H~~l~Ft----~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~ 419 (459)
T KOG4686|consen 344 GHSGLFFT----FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYD 419 (459)
T ss_pred HhhhHHhh----hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchh
Confidence 44444443 33334556677887776666667778888899999999999999999999999999999988644
Q ss_pred chhHHHHHHHHHHHHHHHHHhh
Q 009757 254 IFGPFVIFGLSGFLWVLVWLSA 275 (526)
Q Consensus 254 w~~~f~~~~~~~~~~~~~~~~~ 275 (526)
|--.|.+......+..+..++.
T Consensus 420 ~le~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 420 NLEAFFLIIGLMALTSVGILFY 441 (459)
T ss_pred hHHHHHHHHHHHHHHHHHHHhh
Confidence 5445544443333333333333
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.04 E-value=1.3e-09 Score=100.55 Aligned_cols=149 Identities=17% Similarity=0.140 Sum_probs=120.3
Q ss_pred hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHH
Q 009757 355 YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIG 434 (526)
Q Consensus 355 ~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (526)
.+-+..+.|++++...+.+++.+++.|.+.||+|+| ..+.+++..+.....++.+.+..+..++.=.+-+.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~---------ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYK---------IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGV 171 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccc---------cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhh
Confidence 345667899999999999999999999999999999 66777888887777888888887766666555444
Q ss_pred HHhhhhhhHHHHHHhhcc-c-chhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHhcCc
Q 009757 435 MKSFSHSGFLVNLQEIAP-Q-YSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTGE 512 (526)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~-~-~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (526)
........-..+..+.+| + +|++++|+.-.+..+|..+||+++|.++|..| +...|++.++++++...+-+++.+..
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 445555555666677776 3 68999999999999999999999999999998 89999999988888777766654443
Q ss_pred e
Q 009757 513 R 513 (526)
Q Consensus 513 ~ 513 (526)
+
T Consensus 251 ~ 251 (464)
T KOG3764|consen 251 E 251 (464)
T ss_pred c
Confidence 3
No 230
>PRK09669 putative symporter YagG; Provisional
Probab=99.03 E-value=5.2e-09 Score=104.90 Aligned_cols=122 Identities=9% Similarity=0.148 Sum_probs=97.0
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHH
Q 009757 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNN 212 (526)
Q Consensus 133 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~ 212 (526)
+...+.+.....+...++.+++++++||+|+|+.+.++.++.+++.+...+...++.+.+++..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566677788888899999999999999999988876665444333332257777888889999999999999999
Q ss_pred HHhhhcCc-------chhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 213 MVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 213 ~i~~~~~~-------~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
+++|..+. ++.|...+..+....+|..+|+.+++.+.+..|+
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99998862 2346678899999999999999999999887776
No 231
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.01 E-value=8.8e-09 Score=85.05 Aligned_cols=133 Identities=15% Similarity=0.155 Sum_probs=90.5
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHH
Q 009757 366 SAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLV 445 (526)
Q Consensus 366 ~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (526)
.+...++..++.++.+++.||++||+ ....+.....+..+.....++.+......++.....+...+....
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKP---------VLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhH---------HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 44566778899999999999999882 223333333333333333344444444444433334444556666
Q ss_pred HHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 446 NLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 446 ~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
...+..| ++|+++.++.+....++..++|.+.+.+.+..+ +...+.+.+.+.+++.+.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhc
Confidence 6777776 689999999999999999999999999998876 7777777776666665554443
No 232
>PTZ00207 hypothetical protein; Provisional
Probab=99.01 E-value=4.5e-08 Score=98.91 Aligned_cols=157 Identities=13% Similarity=0.089 Sum_probs=97.3
Q ss_pred HHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhcc
Q 009757 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA 418 (526)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (526)
..+.+..+.+.+ ++.+|++..+.+.+..... ...+..++.|++.||+|+| .++.++.+...++.+....
T Consensus 42 ~~y~fsv~s~~L-~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R---------~vllig~ll~~iG~ll~al 110 (591)
T PTZ00207 42 FMYAFNLISGAM-QARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPR---------PIFVLSMTVFCLGTLLFAL 110 (591)
T ss_pred HHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHH
Confidence 344555566655 5558999999998877633 3345667889999999999 3444555554444444333
Q ss_pred C------chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHH
Q 009757 419 A------KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLL 492 (526)
Q Consensus 419 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~ 492 (526)
. .+.+.+.+..++.+...+...+.......+.+|++||.+.|+......+|+++.+.+...+... ++...|+
T Consensus 111 a~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl 188 (591)
T PTZ00207 111 TFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFF 188 (591)
T ss_pred HhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHH
Confidence 2 3444443333333333333334444555667899999999999999999998655555444432 3556666
Q ss_pred HHHHHHHHHHHHHHHH
Q 009757 493 LTSLLYFLSALFYIIF 508 (526)
Q Consensus 493 ~~~~~~~~~~~~~~~~ 508 (526)
+.+++.++..++...+
T Consensus 189 ~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 189 FLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 6666655554444443
No 233
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.00 E-value=1.9e-08 Score=113.12 Aligned_cols=183 Identities=15% Similarity=0.018 Sum_probs=113.6
Q ss_pred HHHcCchHHHHHHHHHHHHHHHHHHHHhHHHH----HHHHhcC-CcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCc
Q 009757 319 RLLSKMPTWSIIVANAMHSWGFFVILSWMPIY----FNFVYHI-DLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (526)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~-s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (526)
.++++++++.+.+..++..++.+.....++.+ +.+..+. +....++..+++.+..++..++.|+++||++||+..
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 56777777777776666665544332222222 2111111 113467777788888999999999999999998310
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHH
Q 009757 394 VTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAIL 472 (526)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~ 472 (526)
..+....++.....++.. ..++.+.++++.++.....++..+....++.+..+ ++++.++|+.++...+|..+
T Consensus 86 -----~~~~~~~~~~~~~~~~~~-~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~i 159 (1140)
T PRK06814 86 -----KILKFAEIGIAALAIYGF-HLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILL 159 (1140)
T ss_pred -----HHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHH
Confidence 011112222222222222 22445555555555444555566677777777766 68999999999999999999
Q ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 473 GTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 473 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
||.++|++.+..| +...|+..+++.+++.++.+.+
T Consensus 160 gp~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 194 (1140)
T PRK06814 160 GTIIGGLATISGN-FVILVALLMGIAVLGWLASLFI 194 (1140)
T ss_pred HHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999876 7777755444444444444444
No 234
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.99 E-value=1.9e-08 Score=99.36 Aligned_cols=176 Identities=13% Similarity=0.077 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHH----HHhhcCccchhHHHH
Q 009757 326 TWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDM----LIQRGTSVTLTRKIL 401 (526)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~~~~~~~~~~~~~~~ 401 (526)
+..+....+...+++.....+++.|+++ +|.+....+.+..+..+...+..++.|+++|| +|||+ ..
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr--------p~ 76 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR--------PF 76 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH--------HH
Confidence 3445555666677777778888998877 89999999999999999999999999999995 88883 23
Q ss_pred HHHHHHHHHHHHHhhccCchh-----------------HHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cc--hhhHHHH
Q 009757 402 QSIGFIAPGIALIGLTAAKSP-----------------VMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QY--SGVLHGI 461 (526)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~g~~~g~ 461 (526)
+..+.....+.+..+...... +..+..+.+.-.......+...+++.|..| ++ ++.+.++
T Consensus 77 il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~ 156 (477)
T TIGR01301 77 IAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAY 156 (477)
T ss_pred HHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHH
Confidence 333333333333333332221 111222222223333444555677778777 33 3689999
Q ss_pred HHHHHhHHHHHHHHHHhhh--cccc------------chhHHHHHHHHHHHHHHHHHHHHHhc
Q 009757 462 SNTAGTFAAILGTVGAGFF--VELV------------GSFQGFLLLTSLLYFLSALFYIIFST 510 (526)
Q Consensus 462 ~~~~~~lg~~~~~~~~g~l--~~~~------------g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (526)
.+.+.++|+.+++.+++.. .+.. .+++..|++.+++++++.++..+..+
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~ 219 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVK 219 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 9999999999999988865 2211 14678888888877777776655433
No 235
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.97 E-value=9.9e-09 Score=98.41 Aligned_cols=182 Identities=14% Similarity=0.159 Sum_probs=135.5
Q ss_pred HHcCc-hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhc----CCcchhhhHhhHhHHHHHHHHHHHHHHHHHH-HhhcCc
Q 009757 320 LLSKM-PTWSIIVANAMHSWGFFVILSWMPIYFNFVYH----IDLRQASWFSAVPWSVMAFTGYLGGLLSDML-IQRGTS 393 (526)
Q Consensus 320 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-~~~~~~ 393 (526)
.+++| .++.+...-+.-.+++|++...+..|+....+ ++.+++.-+++.+....-+..+++||++||+ |+|
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~--- 92 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR--- 92 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh---
Confidence 34444 46677777788889999999999999998888 9999998888888888888889999999997 555
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhccCc--hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc--c-chhhHHHHHHHHHhH
Q 009757 394 VTLTRKILQSIGFIAPGIALIGLTAAK--SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP--Q-YSGVLHGISNTAGTF 468 (526)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~g~~~g~~~~~~~l 468 (526)
..+..+.++..++.+.+...+ ....+.+.+.+.....+..=+....++.+..| + +|-.++++.++..++
T Consensus 93 ------~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi 166 (498)
T COG3104 93 ------RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI 166 (498)
T ss_pred ------HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh
Confidence 234455555555555555442 33333333333233344445566666666665 2 578888999999999
Q ss_pred HHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 009757 469 AAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTG 511 (526)
Q Consensus 469 g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (526)
|+.++|.+.+++.+..| |...|..+++-..++++.++..++.
T Consensus 167 Gsl~~p~i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 167 GSLIAPIITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHccch
Confidence 99999999999999998 9999999999999988888776544
No 236
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.95 E-value=5.4e-08 Score=89.31 Aligned_cols=177 Identities=16% Similarity=0.108 Sum_probs=136.9
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh-cChHHHHHHH
Q 009757 93 ITSERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGV 171 (526)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~ 171 (526)
..+..|.+...+.+. .+..+....-+|.+..|.|+|..+.|++.+...+.....++..-.+++|. ++|+..+...
T Consensus 206 ~~~~aW~vtLfmGlq----S~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 206 RSPLAWQVTLFMGLQ----SLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred cCchhHHHHHHHHhh----HHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 334455554444433 33334555568999999999999999999999999999999999999965 6788888888
Q ss_pred HHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcC-cchhhHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 009757 172 ALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFP-QTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (526)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~ 250 (526)
+++.++.+.+.+.+.++++.. -++.|+|.|..++.....+.+..+ +++-++..+..+....+=..+||.+.|++.|
T Consensus 282 ~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhD 358 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHD 358 (395)
T ss_pred HHHHHHHHHHHHhhhhHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHH
Confidence 888888888877733333322 489999999999999999998885 4455666777777777778889999999998
Q ss_pred hc-CchhHHHHHHHHHHHHHHHHHhhc
Q 009757 251 QA-GIFGPFVIFGLSGFLWVLVWLSAT 276 (526)
Q Consensus 251 ~~-gw~~~f~~~~~~~~~~~~~~~~~~ 276 (526)
.. +|+..+...+...++..+..+..-
T Consensus 359 a~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 359 ATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 65 599999888888877777666553
No 237
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.94 E-value=6.9e-09 Score=95.33 Aligned_cols=126 Identities=16% Similarity=0.114 Sum_probs=97.3
Q ss_pred cCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHH
Q 009757 356 HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGM 435 (526)
Q Consensus 356 g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (526)
+.+...+|++.+.+.++..+.++.+|.++||+||| ..+.++++..++..+.+....+...++..=++ ++.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk---------pvll~c~~~va~s~ll~~~S~~F~afv~aR~l-~Gi 133 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRK---------PVLLACLIGVALSYLLWALSRNFAAFVLARFL-GGI 133 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCch---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhh
Confidence 34556789999999999999999999999999999 66677777777777777766666333222223 333
Q ss_pred HhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcc---ccchhHHHH
Q 009757 436 KSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE---LVGSFQGFL 491 (526)
Q Consensus 436 ~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~---~~g~~~~~~ 491 (526)
.-.......+++.|+.+ |+|+.+++.+++...+|-++||.++|++.. ..|.|..++
T Consensus 134 ~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~al 193 (451)
T KOG2615|consen 134 FKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFAL 193 (451)
T ss_pred ccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHH
Confidence 33444566777788877 799999999999999999999999999988 566665555
No 238
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.93 E-value=4.1e-08 Score=93.23 Aligned_cols=158 Identities=31% Similarity=0.493 Sum_probs=128.4
Q ss_pred HHHhhhhhhhhcchhhhhhhcCCcc--chhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccc
Q 009757 109 ALCNADRVVMSVAIVPLSLAHGWSR--SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAAD 186 (526)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 186 (526)
+....+........+.+..+++.+. .+.++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++..+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-- 89 (338)
T COG0477 12 LLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA-- 89 (338)
T ss_pred HHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC--
Confidence 3333555566677788888877766 588999999999999999999999999999988888887766666666666
Q ss_pred cc--hHHHHHHHHHhhhhccchhhhhHHHHhhhcCc-chhhHHHHHHHh-hhhhHHHHHHHHHHHHHhh--cCchhHHHH
Q 009757 187 TS--LLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-TERARAVAIAMG-GFTSGNAIGLVLSPILMSQ--AGIFGPFVI 260 (526)
Q Consensus 187 ~~--~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~ig~~l~~~l~~~--~gw~~~f~~ 260 (526)
.+ .+.+++.|+++|++.+...+...+++.++.|+ ++|+...+.... ...+|..+++.+++.+... .+||..|.+
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLL 169 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 44 89999999999999999999999999999987 688999998888 5888999999887777654 579987766
Q ss_pred HHHHHHHH
Q 009757 261 FGLSGFLW 268 (526)
Q Consensus 261 ~~~~~~~~ 268 (526)
........
T Consensus 170 ~~~~~~~~ 177 (338)
T COG0477 170 AALLGLLL 177 (338)
T ss_pred HHHHHHHH
Confidence 66555433
No 239
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.90 E-value=8.4e-08 Score=93.26 Aligned_cols=156 Identities=14% Similarity=0.066 Sum_probs=101.2
Q ss_pred HHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHH-----HhhcCccchhHHHHHHHHHHHHHHHHHhh
Q 009757 342 VILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML-----IQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (526)
Q Consensus 342 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (526)
.+...+|.++++ .|+|..+.++.... .+...+ .++.|.+.||+ ||| +..+..+.+..++....+
T Consensus 6 ~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr--------~~~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 6 LVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRR--------RSWLVLTQVLLLSLLLIL 74 (356)
T ss_pred hHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCcc--------HHHHHHHHHHHHHHHHHH
Confidence 345567888887 79999999998655 444444 88999999998 555 222233333333332222
Q ss_pred ccC---chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccch------
Q 009757 417 TAA---KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGS------ 486 (526)
Q Consensus 417 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~------ 486 (526)
... ...+......++.........+....++.|..| |+|+.+.|+......+|..+++.+.+.+.+..|.
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~ 154 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLIT 154 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 222 222222222222233334444556666777765 7999999999999999999999999999887652
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHH
Q 009757 487 -FQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 487 -~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
|+..|++.+++.+++.+..++.
T Consensus 155 ~wr~~f~i~ai~~l~~~~~~~~~ 177 (356)
T TIGR00901 155 LWGYIFFWTALLILPGLLVTLFL 177 (356)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHh
Confidence 7888888877766655554433
No 240
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.90 E-value=1.3e-08 Score=105.58 Aligned_cols=155 Identities=12% Similarity=0.073 Sum_probs=101.1
Q ss_pred HhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCc----
Q 009757 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK---- 420 (526)
Q Consensus 345 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 420 (526)
..++. +++.++++..+.|++.+.+.++..++.++.+++.||.+|+++.. ++.++.+++.++....+
T Consensus 54 ~~l~~-iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~---------~g~ll~~lg~ll~alphf~~~ 123 (633)
T TIGR00805 54 SSLTT-IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIG---------IGCAIMGLGSFLLSLPHFLSG 123 (633)
T ss_pred hhchh-hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEE---------ecHHHHHHHHHHHhChHHhcC
Confidence 34444 45559999999999999999999999999999999999884322 22222222222211110
Q ss_pred ---------------------------------------------h--hHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-
Q 009757 421 ---------------------------------------------S--PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP- 452 (526)
Q Consensus 421 ---------------------------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 452 (526)
+ ...+++.-++.+...+...+....++.|..|
T Consensus 124 ~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~ 203 (633)
T TIGR00805 124 RYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKS 203 (633)
T ss_pred CccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCc
Confidence 0 1122222222222233334555677777776
Q ss_pred cchhhHHHHHHHHHhHHHHHHHHHHhhhcccc---------------------chhHHHHHHHHHHHHHHHHHHHHHh
Q 009757 453 QYSGVLHGISNTAGTFAAILGTVGAGFFVELV---------------------GSFQGFLLLTSLLYFLSALFYIIFS 509 (526)
Q Consensus 453 ~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~---------------------g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (526)
++|+...|+.+....+|..+|+.++|++.+.. |.|+..|++.+++.++..+.++.++
T Consensus 204 ~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 204 KNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 69999999999999999999999999887543 2356667777766666555554444
No 241
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.86 E-value=8.1e-09 Score=99.09 Aligned_cols=152 Identities=16% Similarity=0.180 Sum_probs=135.7
Q ss_pred hhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhh
Q 009757 123 VPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLA 202 (526)
Q Consensus 123 ~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig 202 (526)
=--.+|.+..+...|........+-++.-++.+++..|+|+-+++.+++.+..+=.+.+... +|.|+.+..-+++|+.
T Consensus 395 fWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L--~n~W~vLPieilqgit 472 (618)
T KOG3762|consen 395 FWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL--QNPWMVLPIEILQGIT 472 (618)
T ss_pred HHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh--cCchheeeHHHHHHHH
Confidence 33457778788888988888888889999999999999999999999999999999988888 9999999999999999
Q ss_pred ccchhhhhHHHHhhhcCcchhhHHHHHHH-hhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc
Q 009757 203 EGVALPAMNNMVARWFPQTERARAVAIAM-GGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSAT 276 (526)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 276 (526)
.+..+.+..+|++...||+-|+.+.++.+ ...++|--+|.++||.+.+.+|-|..|.+.++.+++.+++.....
T Consensus 473 ~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 473 HALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999875 456799999999999999999999999999988877766655443
No 242
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.85 E-value=3e-07 Score=89.17 Aligned_cols=158 Identities=16% Similarity=0.113 Sum_probs=122.5
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhh-cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHH
Q 009757 94 TSERVKVVSMLALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
+.++++...+ ..++.....+..+....++.+. +|.++.+..+.......+..++.+++.++.+|+|+|+++.++.+
T Consensus 234 ~Nrp~~~~l~---~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~ 310 (467)
T COG2211 234 KNRPLLLLLL---MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLL 310 (467)
T ss_pred ccchHHHHHH---HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHH
Confidence 3344444433 3334444444455554554443 56677777788888888888889999999999999999999999
Q ss_pred HHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCc-------chhhHHHHHHHhhhhhHHHHHHHHH
Q 009757 173 LWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQ-------TERARAVAIAMGGFTSGNAIGLVLS 245 (526)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~ig~~l~ 245 (526)
+..++.++..+.+.++.+.+++..++.++|.+...+...++++|..+- +.-|...+......-+|..++..+.
T Consensus 311 ~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 311 LLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred HHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888656889999999999999999999999999988752 3447788888888889999999888
Q ss_pred HHHHhhcCc
Q 009757 246 PILMSQAGI 254 (526)
Q Consensus 246 ~~l~~~~gw 254 (526)
++.....|+
T Consensus 391 g~~L~~~Gy 399 (467)
T COG2211 391 GWILGAIGY 399 (467)
T ss_pred HHHHHHcCC
Confidence 888776653
No 243
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.82 E-value=2.8e-05 Score=77.07 Aligned_cols=280 Identities=11% Similarity=0.007 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHH-HHHhhhhhhHHHhHhcChHHHHHHHHHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWG-YLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~-~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 175 (526)
.+..+..+.+..|+..+.....-..-..+.-.- ..++.+.++-....+. ..+...+..++++++++.+++-+....+.
T Consensus 22 E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~-~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~ 100 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYTILRDLKDTLVVTA-QGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFL 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEec-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 345556666666666665555444333222211 1566677776655553 35557778999999999998887777766
Q ss_pred HHHhhhhhcc-------ccc----------------------hHHHHHHHHHhhhhccchhh-hhHHHHhhhcCcchhhH
Q 009757 176 LATFLTPWAA-------DTS----------------------LLALLAMRAVVGLAEGVALP-AMNNMVARWFPQTERAR 225 (526)
Q Consensus 176 ~~~~~~~~~~-------~~~----------------------~~~l~~~r~l~Gig~g~~~~-~~~~~i~~~~~~~~r~~ 225 (526)
....++++.. +++ .|...+..++.-+-...... .-..+++|.++.+|-.|
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKR 180 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKR 180 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 6666655531 011 12222333333333233233 45788999999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHh---------hcCchhHHHHHH----HHHHHHHHHHHhhccCCCCCCCCCChhHHH
Q 009757 226 AVAIAMGGFTSGNAIGLVLSPILMS---------QAGIFGPFVIFG----LSGFLWVLVWLSATSSTPDRHPQISKYELE 292 (526)
Q Consensus 226 ~~~~~~~~~~~G~~ig~~l~~~l~~---------~~gw~~~f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (526)
..+++..+.++|.+++..+..++.+ ...|...+.... +.+++...+.... .+...+.+...+...
T Consensus 181 fYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~-~~~vl~~~~~~~~~~- 258 (491)
T PF03219_consen 181 FYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYM-NKNVLTDPRFYPSAK- 258 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCccccchhhh-
Confidence 9999999999999999998888877 123554332221 1222222222222 211111111000000
Q ss_pred HHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcch----hhhHhhH
Q 009757 293 YILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQ----ASWFSAV 368 (526)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~~~ 368 (526)
..++++.+....++++.++++|.+..+++...+++.....+....-..+++.+- ++.+ .|.....
T Consensus 259 ----------~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~ 327 (491)
T PF03219_consen 259 ----------KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSW 327 (491)
T ss_pred ----------cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHH
Confidence 002333444556778888999998888888888888877777766666666443 3332 2334445
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh
Q 009757 369 PWSVMAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 369 ~~~~~~i~~~~~g~l~dr~~~~ 390 (526)
.++...+..++++.+.+|+|-+
T Consensus 328 tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 328 TGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhhHH
Confidence 5555666667778888888876
No 244
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.82 E-value=8.1e-08 Score=96.38 Aligned_cols=127 Identities=14% Similarity=0.163 Sum_probs=111.2
Q ss_pred hhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhcc--------ccchHHHHHHHHH
Q 009757 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAA--------DTSLLALLAMRAV 198 (526)
Q Consensus 127 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~l 198 (526)
+.+|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+...+.. .++.+.++..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 56899999999999999999999999999999999999999999999998876543210 0233455666788
Q ss_pred hhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Q 009757 199 VGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (526)
Q Consensus 199 ~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g 253 (526)
.+++.+....+...++.+..|+++++...++..+..++|..+++.+++.+.++.|
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999998899999999999999999999999999999999999999999998777
No 245
>PRK11462 putative transporter; Provisional
Probab=98.82 E-value=2.1e-07 Score=93.31 Aligned_cols=123 Identities=15% Similarity=0.171 Sum_probs=87.8
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhH
Q 009757 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMN 211 (526)
Q Consensus 132 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~ 211 (526)
++...+.+.+.+.++..++.+++++++||+|+|+.+..+..+.++..++..+....+.+.+++.-++.|++.+...+...
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455677788888999999999999999999998776555544434433333212333445555677888777777777
Q ss_pred HHHhhhcC-------cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCc
Q 009757 212 NMVARWFP-------QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 212 ~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw 254 (526)
++++|..+ +++.|..++.......+|..+++.+++.+.+..|+
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 78888776 33345556777788999999999999998876555
No 246
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.81 E-value=4.9e-07 Score=90.96 Aligned_cols=176 Identities=15% Similarity=0.077 Sum_probs=114.0
Q ss_pred cCchHHHHHHHHHHHHH----HHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchh
Q 009757 322 SKMPTWSIIVANAMHSW----GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLT 397 (526)
Q Consensus 322 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~ 397 (526)
++++++..+....+... ........++...++ .|-+ ....++.....++..++.++.|+++|.+|||
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr------- 108 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRR------- 108 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcch-------
Confidence 44555554433333222 222223445555555 6755 5667787888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHH
Q 009757 398 RKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVG 476 (526)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~ 476 (526)
.....+.++..++.......++...+++...+.....+.. ......+.|..| +.|+...++.....-.....++.+
T Consensus 109 --~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~-~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~i 185 (599)
T PF06609_consen 109 --YFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQ-ELAALAISELVPNKWRGLGLAIASIPFIITTWISPLI 185 (599)
T ss_pred --HHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHH-HHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHH
Confidence 5666777777777777666676666666555433333333 234445677777 688877776665555555567777
Q ss_pred HhhhccccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 009757 477 AGFFVELVGSFQGFLLLTSLLYFLSALFYIIFST 510 (526)
Q Consensus 477 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (526)
...+.... +|++.|++..+...++++..+++.+
T Consensus 186 a~~~~~~~-~WRw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 186 AQLFAAHS-GWRWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred HHHhccCC-CcchHHHHHHHHHHHHHHHHHHHhC
Confidence 76665554 5999999988877777666555433
No 247
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.79 E-value=4e-06 Score=80.62 Aligned_cols=282 Identities=10% Similarity=0.007 Sum_probs=158.8
Q ss_pred HHHHHHHHHHhhhhhhhhcchhhhhhh--cCCccchhhHHHHHHHHHHHHhhhhhhHHHh-----HhcChHHHHHH-HHH
Q 009757 102 SMLALALALCNADRVVMSVAIVPLSLA--HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-----YYGGKIIMAWG-VAL 173 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~~~-~~~ 173 (526)
.++.+.+++++.-.+.....+|.+.++ -+.|.+|.|... +....+. .-++|.++.| |+||||.-++= -.+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fS-la~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l 80 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFS-LASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYL 80 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeee-eeechhH-HHHhhhhhhhhhcccccCCcchhhhHHHHH
Confidence 356677888888777766678998888 688888877543 2222222 2455666666 78999865432 222
Q ss_pred HHHHHhhhhhcc-----------------c---cc--hHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHH
Q 009757 174 WSLATFLTPWAA-----------------D---TS--LLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAM 231 (526)
Q Consensus 174 ~~~~~~~~~~~~-----------------~---~~--~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~ 231 (526)
.++..+..+... . ++ ...+...-++.=+-.+....++..+.-....+++++.|.....
T Consensus 81 ~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqt 160 (544)
T PF13000_consen 81 SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQT 160 (544)
T ss_pred HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHH
Confidence 222222222110 0 11 1123333334445557777888888888888899998888888
Q ss_pred hhhhhHHHHHHHHHHHHHh-----hc--------C---chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHH
Q 009757 232 GGFTSGNAIGLVLSPILMS-----QA--------G---IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL 295 (526)
Q Consensus 232 ~~~~~G~~ig~~l~~~l~~-----~~--------g---w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (526)
.+.+.|..++..+.-.+-+ .+ | -..-..+.+.+.++..+...++.+|.|......+.+..+...
T Consensus 161 vG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~ 240 (544)
T PF13000_consen 161 VGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSD 240 (544)
T ss_pred hHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCcccccccccc
Confidence 8888888887766555432 11 1 112234455555555566666666665432211111000000
Q ss_pred Hhcccc-cccCCCC-CCC----CCC---chHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHh
Q 009757 296 REKQKP-LLMGNKH-KPA----TVI---PPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFS 366 (526)
Q Consensus 296 ~~~~~~-~~~~~~~-~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~ 366 (526)
.+.+.. .+.++++ ... ... +.+.+++|-|++..+++.....-.++..-......-+.| .|++.++.+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~ 319 (544)
T PF13000_consen 241 GKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLV 319 (544)
T ss_pred ccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHH
Confidence 000000 0000000 001 111 223456778888888888887777777777777777778 699999887775
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhh
Q 009757 367 AVPWSVMAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 367 ~~~~~~~~i~~~~~g~l~dr~~~~ 390 (526)
.+ .+...++.|+++.|+.+.
T Consensus 320 li----~~P~qii~~~~~~Kws~g 339 (544)
T PF13000_consen 320 LI----DFPFQIILPYYIGKWSAG 339 (544)
T ss_pred HH----hhhHHHHHHHHhhhhhcC
Confidence 44 555566666666666443
No 248
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.76 E-value=0.00019 Score=69.29 Aligned_cols=279 Identities=10% Similarity=-0.004 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhc---CCccchhhHHHHHHHH-HHHHhhhhhhHHHhHhcChHHHHHHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAH---GWSRSFSGIVQSSFLW-GYLVSPIAGGTLVDYYGGKIIMAWGVA 172 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~ 172 (526)
.+..+..+.+..++..+..+..-. +.+.+ ...++.+.++-+..-+ +..+..++.+++.+++.+.+++-+...
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR~----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~ 100 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLRS----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 455555555555655555544443 33333 3456778888888888 667888899999999999999888888
Q ss_pred HHHHHHhhhhhcc-------ccc-----------------------hHHHHHHHHHhhhhccchhh-hhHHHHhhhcCcc
Q 009757 173 LWSLATFLTPWAA-------DTS-----------------------LLALLAMRAVVGLAEGVALP-AMNNMVARWFPQT 221 (526)
Q Consensus 173 ~~~~~~~~~~~~~-------~~~-----------------------~~~l~~~r~l~Gig~g~~~~-~~~~~i~~~~~~~ 221 (526)
.+....+++++.. +++ .|..-+...+.-+-...... .-.....|.+..+
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ 180 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIE 180 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 7777777776652 111 12222222222222222222 4567788999989
Q ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC----------chhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHH
Q 009757 222 ERARAVAIAMGGFTSGNAIGLVLSPILMSQAG----------IFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYEL 291 (526)
Q Consensus 222 ~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g----------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (526)
|-.|..++++.+.+++..++..+..++..+-. .+..+.+.++.++++..+..+.-+...+.+....+..+
T Consensus 181 eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~ 260 (509)
T COG3202 181 EAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKK 260 (509)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhc
Confidence 99999999999999999999998888865211 23344444444444444444433332222211100000
Q ss_pred HHHHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhh---HhhH
Q 009757 292 EYILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASW---FSAV 368 (526)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~---~~~~ 368 (526)
+ .++++.+.....+++.++++|-++.+.+...+++.+.+.+....-.-.++.+-...+..++ +...
T Consensus 261 --------k---k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~ 329 (509)
T COG3202 261 --------K---KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIW 329 (509)
T ss_pred --------c---cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHH
Confidence 0 0122233344567778888898888888888888777776655444444433333222222 2333
Q ss_pred hHHH-HHHHHHHHHHHHHHHHhh
Q 009757 369 PWSV-MAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 369 ~~~~-~~i~~~~~g~l~dr~~~~ 390 (526)
.++. .++...+++.+.+|.|-.
T Consensus 330 tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 330 TGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHHHHHHhhhHHHHHHhhHH
Confidence 3333 334445667777776654
No 249
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.71 E-value=1e-06 Score=83.09 Aligned_cols=155 Identities=16% Similarity=0.069 Sum_probs=125.6
Q ss_pred hcchhhh-hhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHh-HhcChHHHHHHHHHHHHHHhhhhhc-cccchHHHHHH
Q 009757 119 SVAIVPL-SLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVD-YYGGKIIMAWGVALWSLATFLTPWA-ADTSLLALLAM 195 (526)
Q Consensus 119 ~~~~~~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 195 (526)
-+.+.++ .+-||.+..+...+.+....|..++....|++.. |.++|++..+++.+.+++..+..++ ...+.+.+...
T Consensus 228 D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~ 307 (403)
T PF03209_consen 228 DVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPG 307 (403)
T ss_pred HHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 3344333 4558999999999999999999999999999887 6788888888888888877654443 12678899999
Q ss_pred HHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh----------cCchhHHHHHHHHH
Q 009757 196 RAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ----------AGIFGPFVIFGLSG 265 (526)
Q Consensus 196 r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~----------~gw~~~f~~~~~~~ 265 (526)
-++.|++.|.+.....+.+.+...+++.|..+|.+.....++..+|..+++.+.|. .+|-..|.+.++..
T Consensus 308 ~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll 387 (403)
T PF03209_consen 308 VFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLL 387 (403)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988662 23556677776666
Q ss_pred HHHHHHHH
Q 009757 266 FLWVLVWL 273 (526)
Q Consensus 266 ~~~~~~~~ 273 (526)
++.+++..
T Consensus 388 ~~a~~ll~ 395 (403)
T PF03209_consen 388 LAALVLLG 395 (403)
T ss_pred HHHHHHHH
Confidence 55554443
No 250
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.70 E-value=4.5e-07 Score=84.71 Aligned_cols=164 Identities=19% Similarity=0.220 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhhhh-cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 179 (526)
+....++.|+...........++.+..+ .|.+..+.+...+.+..+.++|.+++.++..|+...|.+.+..++..+.++
T Consensus 238 ~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~ 317 (422)
T COG0738 238 LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLL 317 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 3344455555555666677777777766 788999999999999999999999999999999999999998888888888
Q ss_pred hhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHH
Q 009757 180 LTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFV 259 (526)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~ 259 (526)
..++. ++.+.++ +-++.|+..+..+|...+...+..| +.....|..-....+|+++-|.+.|++.+..|-...+.
T Consensus 318 ~~~l~--~g~v~~~-~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 318 AVALI--GGVVALY-ALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred HHHHh--cChHHHH-HHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 88888 7755544 4578899999999999999999997 33455556666678999999999999999999888777
Q ss_pred HHHHHHHHHH
Q 009757 260 IFGLSGFLWV 269 (526)
Q Consensus 260 ~~~~~~~~~~ 269 (526)
+...++.+..
T Consensus 393 ~~pllc~lyV 402 (422)
T COG0738 393 IVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHH
Confidence 5444444433
No 251
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.67 E-value=1.5e-07 Score=93.04 Aligned_cols=176 Identities=13% Similarity=0.058 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcchhhhhhh-cCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcC---------hHHHH
Q 009757 99 KVVSMLALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG---------KIIMA 168 (526)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr---------r~~l~ 168 (526)
..++.+.+..+........+...+|.+.++ +|.+..+.|++.++..+...+..+++|.++||.-+ |..-.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 445666666777777677777777876664 89999999999999999999999999999998855 33344
Q ss_pred HHHHHHHHHHhhhhhccccch-HHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHH
Q 009757 169 WGVALWSLATFLTPWAADTSL-LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (526)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~ 247 (526)
++....+++.++.++....+. ..+.+.-+..++. |...+....-..|.. +++-+..+|+.+....+..+++|.+.+.
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~-g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~ 415 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLS-GFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGI 415 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHc-ccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheee
Confidence 566666666666666632122 2222222222222 333333333344434 5888999999999999999999999999
Q ss_pred HHh---hcCchhHHHHHHHHHHHHHHHHHhhc
Q 009757 248 LMS---QAGIFGPFVIFGLSGFLWVLVWLSAT 276 (526)
Q Consensus 248 l~~---~~gw~~~f~~~~~~~~~~~~~~~~~~ 276 (526)
+.. ...|+..|++.+++.++..++..++-
T Consensus 416 ~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 416 IVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 984 34699999999998888776655553
No 252
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.61 E-value=1.5e-07 Score=67.81 Aligned_cols=80 Identities=20% Similarity=0.196 Sum_probs=73.6
Q ss_pred HhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchH
Q 009757 111 CNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLL 190 (526)
Q Consensus 111 ~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (526)
.++.+..+.+.+|.+.+|.++|.++.|++.+..++|+.+|.+...++.++..+++.+..+.+...+..+.+++. ++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~--~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT--HSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH--hchH
Confidence 35677899999999999999999999999999999999999999999999888999999999999999999998 7766
Q ss_pred HH
Q 009757 191 AL 192 (526)
Q Consensus 191 ~l 192 (526)
.+
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 54
No 253
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.58 E-value=6.9e-05 Score=76.02 Aligned_cols=158 Identities=18% Similarity=0.135 Sum_probs=125.2
Q ss_pred hhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHh-cChHHHHHHHHHHHHHHhhhhhcc-----c----
Q 009757 117 VMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWSLATFLTPWAA-----D---- 186 (526)
Q Consensus 117 ~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-----~---- 186 (526)
.....+.++.++++.+...+.-..+.+.-......+.++.++|-| ||-+++.++.++..++..+..+.. .
T Consensus 56 ~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~ 135 (571)
T KOG1237|consen 56 LVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC 135 (571)
T ss_pred chhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Confidence 346667888889998888888888899888999999999999986 899999999999888865543331 0
Q ss_pred -----------cc---hHHHHHHHHHhhhhccchhhhhHHHHhhhcC---cc---hhhHHHHHHHhhhhhHHHHHHHHHH
Q 009757 187 -----------TS---LLALLAMRAVVGLAEGVALPAMNNMVARWFP---QT---ERARAVAIAMGGFTSGNAIGLVLSP 246 (526)
Q Consensus 187 -----------~~---~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~ig~~l~~ 246 (526)
++ ...++...-+..+|.|+.-+...++-+|-++ ++ .+...+.++....++|..++..+..
T Consensus 136 ~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~v 215 (571)
T KOG1237|consen 136 KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLV 215 (571)
T ss_pred cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHH
Confidence 01 2356777788889999999999999999998 22 2236788889999999999888887
Q ss_pred HHHhhcCchhHHHHHHHHHHHHHHHHHh
Q 009757 247 ILMSQAGIFGPFVIFGLSGFLWVLVWLS 274 (526)
Q Consensus 247 ~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 274 (526)
+.-+..+|.+.|.+..+..++..++++.
T Consensus 216 yiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 216 YIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred hhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 7777889999999988877766655443
No 254
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.57 E-value=2.7e-06 Score=76.31 Aligned_cols=159 Identities=17% Similarity=0.086 Sum_probs=97.0
Q ss_pred HHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc
Q 009757 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (526)
...+.+..|.|.. ++.+|+|..+...+.....++..+| ++.|.+.|+++.+ ....++.+...+++..+.
T Consensus 16 Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~---------~~l~iG~~~~~~GY~~~~ 84 (250)
T PF06813_consen 16 GTTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW---------VVLLIGAVLGFVGYGLLW 84 (250)
T ss_pred CcccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH---------HHHHHHHHHHHHHHHHHH
Confidence 3445555665554 5569999999999999988888775 8899999999988 444444444444443322
Q ss_pred --cC-----chhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHH
Q 009757 418 --AA-----KSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGF 490 (526)
Q Consensus 418 --~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~ 490 (526)
.. .+.|......+++................+.+|++||++.|+.-....+++++-..+...+.+. +....
T Consensus 85 l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~--~~~~f 162 (250)
T PF06813_consen 85 LAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD--DPSSF 162 (250)
T ss_pred HHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC--ChHHH
Confidence 11 1223332222222222222223333334466789999999999999999999988888777765 23333
Q ss_pred HHHHHHH-HHHHHHHHHHHh
Q 009757 491 LLLTSLL-YFLSALFYIIFS 509 (526)
Q Consensus 491 ~~~~~~~-~~~~~~~~~~~~ 509 (526)
+.+.+.. .+++++...+++
T Consensus 163 ll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 163 LLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHHHHHHHHHHHHHHhhhee
Confidence 4444433 333444444443
No 255
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.54 E-value=4.4e-06 Score=68.97 Aligned_cols=109 Identities=14% Similarity=0.168 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhh
Q 009757 138 IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARW 217 (526)
Q Consensus 138 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~ 217 (526)
.-.++......+..++.+.+.+++|.|+.++++.+.+.+-.... +- ++.+.++.+-++.|++.+..+++...++.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~--~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FY--PNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hh--hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 33455666677888888999999999999999999998766554 34 6788999999999999999999999999999
Q ss_pred cCcchhhHHHHHHHhhhhhHHHHHHHHHHHHH
Q 009757 218 FPQTERARAVAIAMGGFTSGNAIGLVLSPILM 249 (526)
Q Consensus 218 ~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 249 (526)
.+++++++..++.......+.++|.++.-.+.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888766553
No 256
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.53 E-value=3.9e-07 Score=86.19 Aligned_cols=178 Identities=15% Similarity=0.027 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhH--------HHHH-HHHHHHHhhhhhhHHHhHhcChHHH
Q 009757 97 RVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGI--------VQSS-FLWGYLVSPIAGGTLVDYYGGKIIM 167 (526)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~--------~~s~-~~~~~~~~~~~~G~l~dr~Grr~~l 167 (526)
+-+.+...+..+|+.-...+..+.....+.+..|+.+.+... ...+ ...++..+-.+...++|++|||++.
T Consensus 302 hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq 381 (538)
T KOG0252|consen 302 HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHH
Confidence 336677777888877777777777788888888776654433 1111 1222333556677899999999999
Q ss_pred HHHHHHHHHHHhhhhhccccc----h----HHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHH
Q 009757 168 AWGVALWSLATFLTPWAADTS----L----LALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNA 239 (526)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~----~----~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 239 (526)
+-+.+++.+..+..+.. .| - ....+..++.-+|= ......+-+|.+|.+-|+...|+.....-.|.+
T Consensus 382 ~~GF~~~~i~~~~~~~~--y~~~~~~~Gf~v~y~l~~ff~NFGP---n~ttfivpaE~FParvR~t~hGIsAA~GK~GAi 456 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGP--YNQLENTIGFVVLYSLTFFFGNFGP---NATTFIVPAEIFPARVRSTCHGISAASGKAGAI 456 (538)
T ss_pred HhhHHHHHHHHHHHcCC--cccccccCceeehHHHHHHHHhcCC---CceeEEeehhhchHHHhhhhhhHHHHhccchHH
Confidence 99999999999988887 44 1 11222333333332 234455678999999999999999999999999
Q ss_pred HHHHHHHHHHh-----hcCchhHHHHHHHHHHHHHHHHHhhccCCC
Q 009757 240 IGLVLSPILMS-----QAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (526)
Q Consensus 240 ig~~l~~~l~~-----~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (526)
+|.....++.+ ..+.|+.+++.+.++++..+..+++ ||+.
T Consensus 457 vg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk 501 (538)
T KOG0252|consen 457 VGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETK 501 (538)
T ss_pred HHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-eccc
Confidence 99999999988 7789999999999888776665554 4543
No 257
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.52 E-value=1.6e-09 Score=109.10 Aligned_cols=164 Identities=16% Similarity=0.166 Sum_probs=111.7
Q ss_pred hhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhh--h-cccc-----
Q 009757 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTP--W-AADT----- 187 (526)
Q Consensus 116 ~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~--~-~~~~----- 187 (526)
.......+.+.++.+.++. -.......+...++.++...+.||+|||++++.+..+.+++.+..+ + ...+
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3444556777777777776 1222233345556677777999999999999999998888877664 1 1111
Q ss_pred chHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 009757 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (526)
Q Consensus 188 ~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 267 (526)
++..+............+..+....+..|.+|.+.|+++.++......++..+++.+...+.+..+-...+++.+++.++
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 22222222221111122335666788899999999999999999999999999998888877766635566666666777
Q ss_pred HHHHHHhhccCCCC
Q 009757 268 WVLVWLSATSSTPD 281 (526)
Q Consensus 268 ~~~~~~~~~~~~~~ 281 (526)
..+..+++.||+..
T Consensus 428 ~~i~~~~~lpET~g 441 (451)
T PF00083_consen 428 AIIFVYFFLPETKG 441 (451)
T ss_pred HHhheeEEEeeCCC
Confidence 77777788888754
No 258
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.43 E-value=1.3e-05 Score=81.86 Aligned_cols=182 Identities=16% Similarity=0.094 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHH
Q 009757 99 KVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT 178 (526)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 178 (526)
+....+.+..+......+......+.+.+..|.+... .+...+..+...++..++..+.||+|||+.++.+...+.++.
T Consensus 295 ~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~ 373 (513)
T KOG0254|consen 295 RLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICL 373 (513)
T ss_pred HHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHH
Confidence 3444455555555555566677788888888877554 455556666667777777999999999999999999999998
Q ss_pred hhhhhcccc-----------chHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHH
Q 009757 179 FLTPWAADT-----------SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (526)
Q Consensus 179 ~~~~~~~~~-----------~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~ 247 (526)
++++..... ....+...-+.......+..+....+.+|.+|.+-|+++.++......+...+-......
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~ 453 (513)
T KOG0254|consen 374 VILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPF 453 (513)
T ss_pred HHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 877655200 112222222233333333456666789999999999999999877776666555444444
Q ss_pred HHhhcCchhHHHHHHHHHHHHHH-HHHhhccCCCC
Q 009757 248 LMSQAGIFGPFVIFGLSGFLWVL-VWLSATSSTPD 281 (526)
Q Consensus 248 l~~~~gw~~~f~~~~~~~~~~~~-~~~~~~~~~~~ 281 (526)
+.+..++...|...+..+.+..+ ..++..||+..
T Consensus 454 ~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 454 ITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred HHHhccccchHHHHHHHHHHHHHHHheEEcccCCC
Confidence 44444456667777666666666 56666666543
No 259
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.40 E-value=1.6e-06 Score=62.10 Aligned_cols=71 Identities=18% Similarity=0.108 Sum_probs=61.3
Q ss_pred HHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHH
Q 009757 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW 174 (526)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 174 (526)
+...+++.+...+.+.|.+|...++.|+|+.++|.+.++..+...++++++|.++||+++++.++....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34556666777778888899999999999999999999999999999999999999999998877766544
No 260
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.37 E-value=2.3e-06 Score=87.81 Aligned_cols=144 Identities=13% Similarity=-0.004 Sum_probs=112.1
Q ss_pred hcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHH
Q 009757 355 YHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIG 434 (526)
Q Consensus 355 ~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (526)
...+.....+..+++.++..+|.++.|.++||+||| .+...++++..++-+.....++.+...+.=++.+.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk---------~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRK---------PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccH---------HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 456677788888999999999999999999999999 56666666666666777777888877777666555
Q ss_pred HHhhhhhhHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 009757 435 MKSFSHSGFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIFSTG 511 (526)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (526)
+..........+..|..+ ++|+.+..+ ......++.+++...+++.. +|+..+++..+..++.++..++.++.
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es 257 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPES 257 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHccCcC
Confidence 555555666666666665 899999999 88889999999999999988 48888888888877766664444333
No 261
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.27 E-value=2.6e-06 Score=84.58 Aligned_cols=162 Identities=14% Similarity=0.069 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcchhhhhhh-cCCccchhhHHHHHHHHHHHHhhhhhhHHHhH----hcChHHHHHHHH
Q 009757 98 VKVVSMLALALALCNADRVVMSVAIVPLSLA-HGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY----YGGKIIMAWGVA 172 (526)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~l~~~~~ 172 (526)
-..++..++.+++.....+.+...+|.+.++ .|.+..+.+.+...+.++.+++.+++|.++|| ..+|........
T Consensus 272 dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~ 351 (495)
T KOG2533|consen 272 DPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLC 351 (495)
T ss_pred chhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3445666777788888888888889998888 56899999999999999999999999999999 667776666666
Q ss_pred HHHHHH-hhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchh-hHHHHHHHhhhhhHHHHHHHHH-HHHH
Q 009757 173 LWSLAT-FLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTER-ARAVAIAMGGFTSGNAIGLVLS-PILM 249 (526)
Q Consensus 173 ~~~~~~-~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~G~~ig~~l~-~~l~ 249 (526)
++.+.. ...... .+.......-+....+.....+......++...+..| -...+....+.+.+..+++.+- +...
T Consensus 352 ~~~~~g~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~a 429 (495)
T KOG2533|consen 352 LYAIIGAISLLAA--AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDA 429 (495)
T ss_pred HHHHHHHHHHHhh--ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccC
Confidence 555544 433333 3344444444444555566677777888877755443 3344444555555544444433 3334
Q ss_pred hhcCchhHHHHH
Q 009757 250 SQAGIFGPFVIF 261 (526)
Q Consensus 250 ~~~gw~~~f~~~ 261 (526)
..++|-..|...
T Consensus 430 p~y~~~~~f~~~ 441 (495)
T KOG2533|consen 430 PRYGWGAVFYML 441 (495)
T ss_pred cchhhhhHHHHH
Confidence 457888888443
No 262
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.22 E-value=1.3e-05 Score=78.24 Aligned_cols=111 Identities=21% Similarity=0.240 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHhhhhhcccc-c------hHHHHHHHHHhhhhccchhhhhHHHHhhhcCcc---hhhHHHHHHHhhh
Q 009757 165 IIMAWGVALWSLATFLTPWAADT-S------LLALLAMRAVVGLAEGVALPAMNNMVARWFPQT---ERARAVAIAMGGF 234 (526)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~~-~------~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 234 (526)
|+++++.+++.+|.++..++..+ . .+.++++.++.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57788889999998884444212 2 367899999999999999999999999999765 5778889999999
Q ss_pred hhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh
Q 009757 235 TSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWLSA 275 (526)
Q Consensus 235 ~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 275 (526)
++|..++..+.+++-++.||.+.|.+.++..++..+..+.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998887776655543
No 263
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.19 E-value=0.00026 Score=66.05 Aligned_cols=148 Identities=14% Similarity=0.066 Sum_probs=87.5
Q ss_pred HHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHH
Q 009757 350 YFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWL 429 (526)
Q Consensus 350 ~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (526)
..++ +|++..+++.++....+.+.+...+.|.+.||+||| .......+...+..+.- ..++.+.+++.=
T Consensus 60 LY~~-yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk---------~~cl~~cily~~scl~k-~~~~~~~L~~GR 128 (354)
T PF05631_consen 60 LYES-YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK---------KACLLFCILYSLSCLTK-HSSNYPVLLLGR 128 (354)
T ss_pred HHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch---------HHHHHHHHHHHHHHHHH-hccccHHHHHHH
Confidence 3344 899999999999999999999999999999999998 22333333333333332 234444444443
Q ss_pred HHHHHHHhhhhhhHH-HHHHhhc----c-cchhhHHHHHH-HHHhHHHHHHHHHHhhhccccch-hHHHHHHHHHHHHHH
Q 009757 430 TLAIGMKSFSHSGFL-VNLQEIA----P-QYSGVLHGISN-TAGTFAAILGTVGAGFFVELVGS-FQGFLLLTSLLYFLS 501 (526)
Q Consensus 430 ~~~~~~~~~~~~~~~-~~~~~~~----~-~~~g~~~g~~~-~~~~lg~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~ 501 (526)
++++..........- -++.|.. | +..+...+... ..+.+..+++..+..++.+..|. ...+|.....+++++
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 333333333333332 2222322 2 33455555554 23344556666666677776652 467788877777777
Q ss_pred HHHHHHH
Q 009757 502 ALFYIIF 508 (526)
Q Consensus 502 ~~~~~~~ 508 (526)
.++....
T Consensus 209 ~~~I~~~ 215 (354)
T PF05631_consen 209 AVLILKT 215 (354)
T ss_pred HHHHHhc
Confidence 6655443
No 264
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=98.13 E-value=4e-05 Score=68.71 Aligned_cols=326 Identities=13% Similarity=0.076 Sum_probs=169.5
Q ss_pred hhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHh
Q 009757 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVA 215 (526)
Q Consensus 136 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~ 215 (526)
.|.+.-+-.+...+..+.+..+.||+..-.=..+..++.+.+.++.+++ ++.++-+.+-.+..++.|.....-.++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs--~s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFS--NSVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEec--cchhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 4666667777888888888889998754444445556777788888888 88999888888888888875555444433
Q ss_pred hhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh--hcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHH
Q 009757 216 RWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS--QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEY 293 (526)
Q Consensus 216 ~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (526)
. ++ ....+.++.+.+.++++|..--..+.+ ...-|...++...+.++.+...++.+++++.......+++.+
T Consensus 142 ~-Y~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~- 215 (409)
T KOG3880|consen 142 R-YP----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTE- 215 (409)
T ss_pred c-CC----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccce-
Confidence 3 32 235566777777777888776666655 345777888877777777777777666554433211111111
Q ss_pred HHHhcccccccCCCCCCCCCCchHHHHHc-CchHHHHHHHHHHHHHHHHHHHHhHHHHH-HH-HhcCCcch---hhhHhh
Q 009757 294 ILREKQKPLLMGNKHKPATVIPPFRRLLS-KMPTWSIIVANAMHSWGFFVILSWMPIYF-NF-VYHIDLRQ---ASWFSA 367 (526)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~s~~~---~~~~~~ 367 (526)
...+.....+..+++.........++-++ -++++..++-.+..++..+.++.-+...+ -+ ..|.+... .-+...
T Consensus 216 ~~~~~~~~~~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqv 295 (409)
T KOG3880|consen 216 IIPSQYLPFEAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQV 295 (409)
T ss_pred eccCCCCcccccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhhe
Confidence 11000000000111101111222333222 22333333434444444444432222111 10 12332221 223333
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHH--HHHHHHHHhhccCchhHHHHHHHHHHHHHHhhh-hhhHH
Q 009757 368 VPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF--IAPGIALIGLTAAKSPVMASAWLTLAIGMKSFS-HSGFL 444 (526)
Q Consensus 368 ~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 444 (526)
.+.++..+++- .-+-..++.. +.+...-+ ++..+.-..+.+.++.+...+.++.-+..++.. .....
T Consensus 296 lYQlGVFiSRS---------S~~~~~~p~l-~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~ 365 (409)
T KOG3880|consen 296 LYQLGVFISRS---------SINLFTMPYL-WLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFH 365 (409)
T ss_pred eeeeeEEEEec---------cceEEechHH-HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHH
Confidence 33333322221 1110000000 01111111 111122223445667776666666644444443 44556
Q ss_pred HHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhh
Q 009757 445 VNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGF 479 (526)
Q Consensus 445 ~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~ 479 (526)
.+..+..|++|-.+++.......+|..++..+.=.
T Consensus 366 ~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 366 NIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 66778999999999999888888887777766533
No 265
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.09 E-value=0.00019 Score=71.03 Aligned_cols=126 Identities=20% Similarity=0.230 Sum_probs=112.2
Q ss_pred hhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhh-HHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhh
Q 009757 122 IVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGG-TLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVG 200 (526)
Q Consensus 122 ~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 200 (526)
.-.+...+++++.+.+.+.+...+...+++++.. .+...+|-|++..+|++...+...+.+++ ++.|+++....+.+
T Consensus 265 ~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~--~~~w~~~~~~v~~~ 342 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA--TETWMMFAAGVVVA 342 (463)
T ss_pred EEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh--ccchhhhHHHHHHH
Confidence 4455667899999999999988888888888877 77888899999999999999999999999 99999999988887
Q ss_pred hhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 009757 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (526)
Q Consensus 201 ig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~ 250 (526)
+. +...|+..+.++.+.+++++|+++++.+....+..+++|.+-+.+..
T Consensus 343 ~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 343 LA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hh-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 76 56699999999999999999999999999999999999998877654
No 266
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.04 E-value=4.1e-05 Score=54.87 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhh
Q 009757 328 SIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (526)
.+-..+++.+.+...+..++|.|+++ .|+++.++|.+.++..+...++.+++|+++||.+++
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 34566777888888999999999998 799999999999999999999999999999999988
No 267
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=98.00 E-value=0.00029 Score=62.39 Aligned_cols=101 Identities=16% Similarity=0.193 Sum_probs=60.0
Q ss_pred chhhHHHHHHHhhhhhHHHHHHHHHHHH---Hh--hcCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHHHH
Q 009757 221 TERARAVAIAMGGFTSGNAIGLVLSPIL---MS--QAGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEYIL 295 (526)
Q Consensus 221 ~~r~~~~~~~~~~~~~G~~ig~~l~~~l---~~--~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (526)
|+|+....+...+.++|.++....--.- .+ .-.|++.+.+.+++.++.+++..++-.+-....+. +++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~------ 74 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQ------ 74 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-ccc------
Confidence 5666666677777888877765442111 11 23599999999888877777666653332221111 011
Q ss_pred HhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHH
Q 009757 296 REKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHS 337 (526)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (526)
++++..........+.+|++..|...+.+...-
T Consensus 75 ---------~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 75 ---------EKENSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ---------ccccccccccchHHHHHccchHHHHHHHHHHHh
Confidence 111222233467889999999998877665543
No 268
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.94 E-value=0.0003 Score=72.86 Aligned_cols=162 Identities=10% Similarity=0.040 Sum_probs=103.8
Q ss_pred HHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhcc
Q 009757 339 GFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTA 418 (526)
Q Consensus 339 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (526)
.++++...+..|+.+.+|++...+..+...+....-+..+++|+++|++-.+ ++.+ .++.++..++..++..
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~-------~~tI-l~~~ii~~lG~~llai 73 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK-------FKTI-LYLSIVYVVGHALLSF 73 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------HHHH-HHHHHHHHHHHHHHHh
Confidence 3556677778888888899999888888888888888889999999986444 1222 2222222222222221
Q ss_pred C--ch------hHHHHHHHHHHHHHHhhhhhhHHHHHHhhcc-c---chhhHHHHHHHHHhHHHHHHHHHHhhhcccc--
Q 009757 419 A--KS------PVMASAWLTLAIGMKSFSHSGFLVNLQEIAP-Q---YSGVLHGISNTAGTFAAILGTVGAGFFVELV-- 484 (526)
Q Consensus 419 ~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~-- 484 (526)
. +. ....+..+.+..++.+..-+.......+..+ + .+-..+.+++...++|+.+++.+.+++.+..
T Consensus 74 ~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~ 153 (654)
T TIGR00926 74 GAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC 153 (654)
T ss_pred ccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1 10 1112222333333333444555555555443 2 4677889999999999999999999987543
Q ss_pred -c---hhHHHHHHHHHHHHHHHHHHHHH
Q 009757 485 -G---SFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 485 -g---~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
| +|...|.+.+++.+++.+++...
T Consensus 154 fg~~~~~~~aF~i~~i~m~ia~lvf~~g 181 (654)
T TIGR00926 154 FGCQDCYPLAFGVPAILMILALIVFMAG 181 (654)
T ss_pred cccCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 1 37788888888888777766554
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.93 E-value=0.00079 Score=64.07 Aligned_cols=120 Identities=13% Similarity=0.002 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHH----HHHHhhhhhhHHHhHhcChHHHHHHHHHHH
Q 009757 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLW----GYLVSPIAGGTLVDYYGGKIIMAWGVALWS 175 (526)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~----~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 175 (526)
...+.++..+-....++++..+.+++.+++-.+.. .-.....+.+ ...+....-.++.-|..+| +.........
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~-~~~~l~~~~i 96 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTR-VGYLLSLIAI 96 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 34444455555566777888888888877644333 2233333333 3344444444444452211 1111111111
Q ss_pred HHHhhhhhcc-------ccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcch
Q 009757 176 LATFLTPWAA-------DTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTE 222 (526)
Q Consensus 176 ~~~~~~~~~~-------~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~ 222 (526)
+....+.++. ...++..++.-.+.+.+.|..+.......++. |++.
T Consensus 97 l~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~y 149 (406)
T KOG1479|consen 97 LFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEY 149 (406)
T ss_pred HHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHH
Confidence 1111222221 13466677778888999888888877766654 4443
No 270
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.76 E-value=0.0032 Score=62.22 Aligned_cols=52 Identities=12% Similarity=0.171 Sum_probs=36.8
Q ss_pred chHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHH
Q 009757 188 SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL 244 (526)
Q Consensus 188 ~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l 244 (526)
.++..++.-++.|++.+.......++.+ .+|++ .++.+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 4677777888899999988888888776 45533 4555666666666666554
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.69 E-value=0.00084 Score=66.68 Aligned_cols=157 Identities=21% Similarity=0.223 Sum_probs=95.8
Q ss_pred HhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHH---hhcCccchhHHHHHHHHHHHHHHHHHhhccCc-
Q 009757 345 SWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLI---QRGTSVTLTRKILQSIGFIAPGIALIGLTAAK- 420 (526)
Q Consensus 345 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 420 (526)
.-...++++.+|+++.+...+.....+-.. ..++.|.++|-+. .| |+..+.++.++..+..+.+...+
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~r-------r~~Y~~i~~~~~~~~~~~~~~~~~ 81 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYR-------RKPYMIIGWLLGAVSALVLALLPA 81 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCc-------chHHHHHHHHHHHHHHHHHHhccc
Confidence 344567788899999988877666555444 5578999999874 33 34555555554433333222221
Q ss_pred ---hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhc---ccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHH
Q 009757 421 ---SPVMASAWLTLAIGMKSFSHSGFLVNLQEIA---PQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLT 494 (526)
Q Consensus 421 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~ 494 (526)
+.....+++++........-...-....|.. |+.+|...+....+..+|+.++..+.|.+.+..+ ++..|.+.
T Consensus 82 ~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~ 160 (433)
T PF03092_consen 82 SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLIS 160 (433)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHH
Confidence 2222222222222222233333333333433 4458888999999999999999999999999876 77777777
Q ss_pred HHHHHHHHHHHHHHhc
Q 009757 495 SLLYFLSALFYIIFST 510 (526)
Q Consensus 495 ~~~~~~~~~~~~~~~~ 510 (526)
+.+..+..+..+++.+
T Consensus 161 ~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 161 AALPLLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 6666655555444444
No 272
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.63 E-value=0.0012 Score=63.32 Aligned_cols=139 Identities=12% Similarity=0.005 Sum_probs=93.2
Q ss_pred HHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHH-----HHHH
Q 009757 103 MLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL-----WSLA 177 (526)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~-----~~~~ 177 (526)
-+.+.++..+...+.+.+.+.. -.++.-...+..+...+|.+|..++.--...+ |+ |++.+.+.+- ..+.
T Consensus 251 PL~lVY~aEY~InqGv~~tl~f-p~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l 325 (402)
T PF02487_consen 251 PLFLVYFAEYFINQGVAPTLLF-PNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLL 325 (402)
T ss_pred HHHHHHHHHHHHHhchHHHhcC-CccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHH
Confidence 3455666666544443333211 11233335677788888888877765432221 23 3333332222 2222
Q ss_pred HhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q 009757 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 248 (526)
....-+. ++.|.+++.-+..|+..|..+......+.|-.++++|..+++..+.+-++|..++.+++-.+
T Consensus 326 ~s~~~fi--psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 326 QSWYRFI--PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHh--hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 2233444 78899999999999999999999999999999999999999999999999999999888665
No 273
>PRK03612 spermidine synthase; Provisional
Probab=97.62 E-value=0.0075 Score=61.15 Aligned_cols=166 Identities=14% Similarity=0.017 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHH
Q 009757 330 IVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAP 409 (526)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 409 (526)
.+..++..++...........+...+|-+....+.+.+.+.++..+|+.+++++.++..++. ...-+.++++..
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~------~~~e~~i~l~~~ 93 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF------VAVELLLALLGG 93 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH------HHHHHHHHHHHH
Confidence 34444555555556666666666667888888888989888888888888887764433330 001111111111
Q ss_pred HHHHHh---hccCchhHH-HHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhcc-cc
Q 009757 410 GIALIG---LTAAKSPVM-ASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVE-LV 484 (526)
Q Consensus 410 ~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~-~~ 484 (526)
....+. ......... .....++.....+...|...-+......+..|...|-.+....+|+++|+.+.+++.- ..
T Consensus 94 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l 173 (521)
T PRK03612 94 LSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRL 173 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhc
Confidence 111111 111000111 1111111122223333333333333223346777888999999999999999888764 67
Q ss_pred chhHHHHHHHHHHHHHH
Q 009757 485 GSFQGFLLLTSLLYFLS 501 (526)
Q Consensus 485 g~~~~~~~~~~~~~~~~ 501 (526)
|.....+.+..+..+++
T Consensus 174 G~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 174 GLIRTAALTGSLNLLAA 190 (521)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 74444444433333333
No 274
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.59 E-value=0.03 Score=51.42 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=53.4
Q ss_pred HHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhc
Q 009757 146 GYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWF 218 (526)
Q Consensus 146 ~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~ 218 (526)
..+..+++.+.+..++|.|++++++...+......-.. +.+..++-.....|+|.+..+..--+++++.-
T Consensus 70 ~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~---pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLE---PRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc---hhHHhhccHHHhhccccccccccCcceecHHH
Confidence 33445555568999999999999998888765544322 67888999999999999988877666666554
No 275
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.55 E-value=0.0008 Score=65.97 Aligned_cols=175 Identities=11% Similarity=0.072 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHH-HhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHH
Q 009757 327 WSIIVANAMHSWGFFVILSWMPIYFNF-VYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIG 405 (526)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 405 (526)
+...+..++.......+..-.-+|+++ ..+-+....|++.+...++.++++++.|+...|.+.-++ .++....
T Consensus 37 ~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~------Pli~s~i 110 (488)
T KOG2325|consen 37 YLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKK------PLIVSFL 110 (488)
T ss_pred HHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCccc------CHHHHHH
Confidence 344444444444443344444456665 246677788999999999999999999999999875311 1111111
Q ss_pred HHHHH-HHHHhhccCch--hHHHHHHHHHHHHHHhhhhhhHHHHHHhhc-ccchhhHHHHHHHHHhHHHHHHHHHHhhhc
Q 009757 406 FIAPG-IALIGLTAAKS--PVMASAWLTLAIGMKSFSHSGFLVNLQEIA-PQYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (526)
Q Consensus 406 ~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~ 481 (526)
+...+ +.++.+...++ .++.+.+= +..|.+.......-.+..+.. +++|.++++.......+|..+||.+...+.
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R-~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVAR-ILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHH-HHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 11122 22213333333 22222222 122222233334445555543 478888888877777777777776654433
Q ss_pred c------------ccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 482 E------------LVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 482 ~------------~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
. .++.|..+-++.+++.++..+...+.
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~ 228 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFF 228 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhh
Confidence 2 11236667777777777666655554
No 276
>PRK03612 spermidine synthase; Provisional
Probab=97.53 E-value=0.0052 Score=62.25 Aligned_cols=142 Identities=19% Similarity=0.207 Sum_probs=86.9
Q ss_pred hhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHH---HHHHHhhhhhcc--ccch-HHHHHHHHHhh
Q 009757 127 LAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVAL---WSLATFLTPWAA--DTSL-LALLAMRAVVG 200 (526)
Q Consensus 127 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~---~~~~~~~~~~~~--~~~~-~~l~~~r~l~G 200 (526)
.-+|.+..+.+.+.+++..|..+|+.++|++.++.-++.. .+-..+ ..++..+..... ...+ ..++...++.+
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468888899999999999999999999888744333322 111111 111111111110 0111 22334456677
Q ss_pred hhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHH-hhcCchhHHHHHHHHHHHHHH
Q 009757 201 LAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM-SQAGIFGPFVIFGLSGFLWVL 270 (526)
Q Consensus 201 ig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~~gw~~~f~~~~~~~~~~~~ 270 (526)
+..|+..|....+..+.. .++-++..|-......+|.++|.++.+++. ..+|-....++.+.+.++..+
T Consensus 122 ~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 888888887777665543 234567788888899999999999987765 467755555555555444443
No 277
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.22 E-value=0.035 Score=46.02 Aligned_cols=107 Identities=12% Similarity=0.010 Sum_probs=69.1
Q ss_pred hHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHhhhhhhH
Q 009757 364 WFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGF 443 (526)
Q Consensus 364 ~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (526)
.-.++......+..++.+.+.+++|.| +.+.++.+...+........ +.+..+..-.+.+...+..+...
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K---------~sm~lg~~~y~~y~~~~~~~-~~~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPK---------WSMILGSLGYAIYIASFFYP-NSYTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHhhhhHHhhHhh
Confidence 345555666778888899999999988 55666666665555444333 34444444433333444555555
Q ss_pred HHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhh
Q 009757 444 LVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFF 480 (526)
Q Consensus 444 ~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l 480 (526)
..++.+... +.+++..|+...+.+.+.++|..+.-.+
T Consensus 111 g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566555 6888888998888888888877665444
No 278
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.17 E-value=0.00074 Score=64.55 Aligned_cols=175 Identities=13% Similarity=0.076 Sum_probs=110.5
Q ss_pred HHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcC-hHHHHHHHHHHHHHHh-hh
Q 009757 104 LALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG-KIIMAWGVALWSLATF-LT 181 (526)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~-~~ 181 (526)
+...+.+.....+.....+......-|.+....|++.....++.++++...|.+.||... |.++++......++.. +.
T Consensus 271 l~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~ 350 (480)
T KOG2563|consen 271 LAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLL 350 (480)
T ss_pred HHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 333333333434444555554455557777889999999999999999999999999864 6666666666555532 11
Q ss_pred hhc-cccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC----chh
Q 009757 182 PWA-ADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG----IFG 256 (526)
Q Consensus 182 ~~~-~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g----w~~ 256 (526)
.+. .....+.++..-.+.|.+.....|...-+-.|..-|..-+.-.|+.....++-.++-..+-+.+.+..+ |..
T Consensus 351 ~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~ 430 (480)
T KOG2563|consen 351 TCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFP 430 (480)
T ss_pred HhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCcc
Confidence 111 112345566667788888888899888888887755555666777766666666666666666666554 333
Q ss_pred HHHHHHHHHHHHHHHHHhhccC
Q 009757 257 PFVIFGLSGFLWVLVWLSATSS 278 (526)
Q Consensus 257 ~f~~~~~~~~~~~~~~~~~~~~ 278 (526)
.-+......++.+++..+++|+
T Consensus 431 ~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 431 ANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred chhHhHHHHHHHHHHHhhhhhh
Confidence 3333444444444455555444
No 279
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.17 E-value=0.0042 Score=60.82 Aligned_cols=148 Identities=18% Similarity=0.082 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhh
Q 009757 101 VSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFL 180 (526)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 180 (526)
.+...++..+-++..-.++..+..+...-|+++..+|..-+...+....+.+...++.+|+|..|.-+++...-..+..+
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~ 339 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLAL 339 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH
Confidence 44444444444554445566666666667999999999999999999999999999999999988877776644433322
Q ss_pred hhh---cc-cc----chHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q 009757 181 TPW---AA-DT----SLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 181 ~~~---~~-~~----~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 248 (526)
+.. .+ .+ +...++.+-.+.=+|.=++..+..-++.|..|+++||...|.-....++-.++-..++-.+
T Consensus 340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 221 11 11 3334444445555565566788889999999999999999999999998888877766544
No 280
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.11 E-value=0.032 Score=53.93 Aligned_cols=159 Identities=9% Similarity=-0.029 Sum_probs=95.5
Q ss_pred HHHhHHHHHHHH-hcCCcchhhh-HhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCc
Q 009757 343 ILSWMPIYFNFV-YHIDLRQASW-FSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAK 420 (526)
Q Consensus 343 ~~~~~~~~~~~~-~g~s~~~~~~-~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (526)
...++..|+.+. .|++..+..- +.-+..-..++..+....+.|.++.| .++++..+...+...++....
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk---------pviil~~~~~i~t~~lll~~~ 92 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK---------PVIILQALSYIITWLLLLFGT 92 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHHHHHC
Confidence 457788888886 7888888654 33333344566667888899999888 444444444333344444445
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHHHH-HhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhcccc-chhHHHHHHHHHHH
Q 009757 421 SPVMASAWLTLAIGMKSFSHSGFLVNL-QEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELV-GSFQGFLLLTSLLY 498 (526)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~ 498 (526)
+....-+.-++.+... ..-....+++ ..+++++.-++.+...+...+|.+++..++-.+.... .+|.....+.....
T Consensus 93 sv~~mq~~q~~yg~~~-a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~ 171 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLAT-AAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASV 171 (412)
T ss_pred cHHHHHHHHHHHHHHH-HHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 5444333333222222 2222333332 3444567777888888888888888887777766632 25777766666666
Q ss_pred HHHHHHHHHHhcC
Q 009757 499 FLSALFYIIFSTG 511 (526)
Q Consensus 499 ~~~~~~~~~~~~~ 511 (526)
.++.+..+++++.
T Consensus 172 ~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 172 SLALLIALFLPMP 184 (412)
T ss_pred HHHHHHHHHcCCC
Confidence 6667666666543
No 281
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.02 E-value=0.1 Score=52.00 Aligned_cols=145 Identities=10% Similarity=-0.016 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcC-----CcchhhhHhhHhHHHHHHH-HHHHHHHHHHHHhhcCccchhH
Q 009757 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHI-----DLRQASWFSAVPWSVMAFT-GYLGGLLSDMLIQRGTSVTLTR 398 (526)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~~~~~~~~~~~~~~i~-~~~~g~l~dr~~~~~~~~~~~~ 398 (526)
+++...+..++..+.++.. --++|..+. +.+...++-....+...+. .++.+++++|++|++..
T Consensus 8 k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf----- 77 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALF----- 77 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhH-----
Confidence 3445555555544443332 334565555 3345666666555555555 78889999999988432
Q ss_pred HHHHHHHHHH--HHHHHHh-hccCch--------------------------hHHHHHHHHHHHHHHhhhhh-hHHHHHH
Q 009757 399 KILQSIGFIA--PGIALIG-LTAAKS--------------------------PVMASAWLTLAIGMKSFSHS-GFLVNLQ 448 (526)
Q Consensus 399 ~~~~~~~~~~--~~~~~~~-~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 448 (526)
........ ..+..+. .+..+. .|......+..-.++..... ..+..++
T Consensus 78 --~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan 155 (472)
T TIGR00769 78 --YTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN 155 (472)
T ss_pred --HHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 1111111 111100 12222222222233333343 6788899
Q ss_pred hhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhc
Q 009757 449 EIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (526)
Q Consensus 449 ~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~ 481 (526)
|... ++..+-+++....+++|..+++.+..++.
T Consensus 156 di~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 156 QITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887 78899999999999999999999988876
No 282
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.84 E-value=0.0007 Score=59.34 Aligned_cols=65 Identities=3% Similarity=0.084 Sum_probs=47.8
Q ss_pred hHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHH
Q 009757 316 PFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLG 380 (526)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~ 380 (526)
+|..-|++-.+....+.+.+.-...+.-..|++.|..+...++....+++-.+..+++...+.+.
T Consensus 193 ~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~ 257 (412)
T KOG4830|consen 193 HWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVN 257 (412)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhc
Confidence 44455666667777777888777778888999999888888887777787777777666555443
No 283
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.65 E-value=0.01 Score=61.15 Aligned_cols=164 Identities=11% Similarity=0.064 Sum_probs=104.4
Q ss_pred HHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccC-
Q 009757 341 FVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAA- 419 (526)
Q Consensus 341 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 419 (526)
.++....-.-+++.++++..+.|++.+.+-++..+...+..+...|..|.++ +..+.+.++++.++....
T Consensus 113 ~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~---------Ig~G~~~m~lgsll~alPH 183 (735)
T KOG3626|consen 113 VGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRW---------IGIGLVLMGLGSLLFALPH 183 (735)
T ss_pred hhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccce---------eeechhHHHHHHHHHhChH
Confidence 3544444455677799999999999999889988888888888777766532 222333322222221100
Q ss_pred -------------------c----------------------------hhHHHHHHHHHHHHHHhhhh----hhHHHHHH
Q 009757 420 -------------------K----------------------------SPVMASAWLTLAIGMKSFSH----SGFLVNLQ 448 (526)
Q Consensus 420 -------------------~----------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 448 (526)
+ .....+..++++....+++. +.-..++.
T Consensus 184 f~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiD 263 (735)
T KOG3626|consen 184 FFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYID 263 (735)
T ss_pred HhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccc
Confidence 0 00112223333333333333 23346677
Q ss_pred hhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcc------------------ccchhHHHHHHHHHHHHHHHHHHHHHh
Q 009757 449 EIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE------------------LVGSFQGFLLLTSLLYFLSALFYIIFS 509 (526)
Q Consensus 449 ~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 509 (526)
|... ++.....|+.+++..+|-++|=.+++++.. +.|.|+..|++++.+.++..+.+++++
T Consensus 264 Dnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fP 343 (735)
T KOG3626|consen 264 DNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFP 343 (735)
T ss_pred ccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 7766 578888999999988888888888777653 335678888899999888888888876
Q ss_pred cCce
Q 009757 510 TGER 513 (526)
Q Consensus 510 ~~~~ 513 (526)
+..+
T Consensus 344 k~lp 347 (735)
T KOG3626|consen 344 KELP 347 (735)
T ss_pred ccCc
Confidence 5543
No 284
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.64 E-value=0.014 Score=42.33 Aligned_cols=76 Identities=17% Similarity=0.219 Sum_probs=55.8
Q ss_pred HHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhh
Q 009757 337 SWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGL 416 (526)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (526)
..+-+.+...+|...+| .++|..+.+++.+...++..+|.+...++.++..++ .....+++...+.....
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~---------~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR---------RLLRAGLLLTVLSTAAM 74 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH---------HHHHHHHHHHHHHHHHH
Confidence 44566777888888888 799999999999999999999999999888775444 34445555555555555
Q ss_pred ccCchh
Q 009757 417 TAAKSP 422 (526)
Q Consensus 417 ~~~~~~ 422 (526)
...++.
T Consensus 75 a~~~~~ 80 (85)
T PF06779_consen 75 ALTHSF 80 (85)
T ss_pred HHHhch
Confidence 444443
No 285
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.57 E-value=0.08 Score=52.50 Aligned_cols=111 Identities=16% Similarity=0.055 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhHhcCh-HHHHHHHHHHHHH---Hhhhhhcc-------ccchHHHHHHHHHhhhhccc
Q 009757 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGK-IIMAWGVALWSLA---TFLTPWAA-------DTSLLALLAMRAVVGLAEGV 205 (526)
Q Consensus 137 g~~~s~~~~~~~~~~~~~G~l~dr~Grr-~~l~~~~~~~~~~---~~~~~~~~-------~~~~~~l~~~r~l~Gig~g~ 205 (526)
-....++.++-.+|..+..+.. .-++| +.+.+..+.-.+. .++|..-+ -++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4556677777777776544321 11222 1333333333222 22332210 03556677779999999999
Q ss_pred hhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q 009757 206 ALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 206 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 248 (526)
.......+..+..++++|..+..+...+..+|..+|..++-.+
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998876544
No 286
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.53 E-value=0.13 Score=50.76 Aligned_cols=106 Identities=14% Similarity=0.188 Sum_probs=81.0
Q ss_pred HHHHHHHHHhhhhhhHHHh---HhcChHHHHHHHHHHHHHHhhhhhcc----------------ccchHHHHHHHHHhhh
Q 009757 141 SSFLWGYLVSPIAGGTLVD---YYGGKIIMAWGVALWSLATFLTPWAA----------------DTSLLALLAMRAVVGL 201 (526)
Q Consensus 141 s~~~~~~~~~~~~~G~l~d---r~Grr~~l~~~~~~~~~~~~~~~~~~----------------~~~~~~l~~~r~l~Gi 201 (526)
-...++..+++.+.+.+.+ ++|+++++.++..+..++.++.-+.. .+++...+++.++.|+
T Consensus 286 ~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~ 365 (461)
T KOG3098|consen 286 IGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGF 365 (461)
T ss_pred HHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhh
Confidence 3444555555666666665 56899999999999988888765542 1246678888999999
Q ss_pred hccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHH
Q 009757 202 AEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (526)
Q Consensus 202 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~ 247 (526)
+-+......+.++.+.. +++|..+.++...-..++..++......
T Consensus 366 ~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 366 GDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999999 5888899999888888877776555443
No 287
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.45 E-value=0.28 Score=45.79 Aligned_cols=138 Identities=16% Similarity=0.137 Sum_probs=81.3
Q ss_pred HHHHHHHHhHHHHHHHHhcCCc--chhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHh
Q 009757 338 WGFFVILSWMPIYFNFVYHIDL--RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIG 415 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (526)
..........+.+..+ .+.+. ...++..+...+...++.++.|.+.||.|+| +.................
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~~~~~~~~~~~~~~~~ 87 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-------KVLIIGLLLFLLGTLLLA 87 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch-------HHHHHHHHHHHHHHHHHH
Confidence 3333444556666665 44444 4678888888888888889999999999777 112222211111111111
Q ss_pred hccCchhHHHHHHHHHHHHHHhhhhhhHHHHHHhhccc--chhhHHHHHHH-HHhHHHHHHHHHHhhhccc
Q 009757 416 LTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQ--YSGVLHGISNT-AGTFAAILGTVGAGFFVEL 483 (526)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~-~~~lg~~~~~~~~g~l~~~ 483 (526)
+......+.............+...+....+..+..|+ .++...+.... ...++..+++.+.+.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 88 LAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred hCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111233333333322223334556666777777774 78888888888 5778888888777776655
No 288
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.38 E-value=0.00052 Score=69.73 Aligned_cols=165 Identities=13% Similarity=0.052 Sum_probs=1.1
Q ss_pred HHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhc
Q 009757 338 WGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLT 417 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (526)
....++....-.-++.+++++..++|++.+.+-++..+..++..++.+|-.|.+ .+..+.++.+++.+++.
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrpr---------wig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPR---------WIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc---------eeeecHHHHHHHHHHHh
Confidence 444444444444556669999999999999999999999998888888765542 22333333333333221
Q ss_pred cC----c------------------------------------------hhHHHHHHHHHHHHHHhhhhh----hHHHHH
Q 009757 418 AA----K------------------------------------------SPVMASAWLTLAIGMKSFSHS----GFLVNL 447 (526)
Q Consensus 418 ~~----~------------------------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 447 (526)
.. + ........++++-...+++.. .-.+++
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 00 0 001112223333333333333 334556
Q ss_pred Hhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcc---------------------ccchhHHHHHHHHHHHHHHHHHH
Q 009757 448 QEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVE---------------------LVGSFQGFLLLTSLLYFLSALFY 505 (526)
Q Consensus 448 ~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~---------------------~~g~~~~~~~~~~~~~~~~~~~~ 505 (526)
.|..+ ++.+...|+..++..+|-++|=.+++...+ +.|.|+..|++.+.+.++..+.+
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655 577888888888888888887777776653 23456777777777777777776
Q ss_pred HHHhcC
Q 009757 506 IIFSTG 511 (526)
Q Consensus 506 ~~~~~~ 511 (526)
+.++|+
T Consensus 247 ~~FPk~ 252 (539)
T PF03137_consen 247 FFFPKK 252 (539)
T ss_dssp ------
T ss_pred HcCCcc
Confidence 666543
No 289
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=95.05 E-value=0.27 Score=46.29 Aligned_cols=166 Identities=12% Similarity=0.051 Sum_probs=92.5
Q ss_pred HHHHHHHHHHhhhhhhhhcchhhhhhhcCCccc-hhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHH------
Q 009757 102 SMLALALALCNADRVVMSVAIVPLSLAHGWSRS-FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALW------ 174 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~------ 174 (526)
+.+.+++++.....-++.......+.+++-+.- ....-...-.....+..++.|...|+..|+|++...+++-
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 345566676666666777776666666654433 3333333445556777888899999999999887655433
Q ss_pred HHHHhhhhhccc----cchHHHHHHHHHhhhhccc----hhhhhHHHHhhhc----Ccchh---hHHHHHHHhhhhhHHH
Q 009757 175 SLATFLTPWAAD----TSLLALLAMRAVVGLAEGV----ALPAMNNMVARWF----PQTER---ARAVAIAMGGFTSGNA 239 (526)
Q Consensus 175 ~~~~~~~~~~~~----~~~~~l~~~r~l~Gig~g~----~~~~~~~~i~~~~----~~~~r---~~~~~~~~~~~~~G~~ 239 (526)
+.+.++..+... .++..+..+-++.-...+. ...-...+-.||. ..+.+ .++++.....-..-..
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~ 189 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNL 189 (503)
T ss_pred HHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhc
Confidence 222233333311 2344444443332221111 1111111222332 22333 3444666666667788
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 009757 240 IGLVLSPILMSQAGIFGPFVIFGLSGFL 267 (526)
Q Consensus 240 ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 267 (526)
+.|++.|.+.+..+-|..-..+++..++
T Consensus 190 Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 190 LAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhcccceeechhhhhhhhHHHHHH
Confidence 9999999999888888765555555444
No 290
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.93 E-value=1.4 Score=42.53 Aligned_cols=178 Identities=12% Similarity=0.090 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHH
Q 009757 327 WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGF 406 (526)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 406 (526)
+..++.........+.+.+-.+.|..+..+.+. .-.+.....+.+.+..++...+.-+...|.. .+ .+..+....+
T Consensus 21 ~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~-~~-~~~~l~~~~i 96 (406)
T KOG1479|consen 21 LIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLR-TR-VGYLLSLIAI 96 (406)
T ss_pred HHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHH
Confidence 334444444445566666666666665444443 4444444445554444444444444433310 00 0111111111
Q ss_pred HHHHHHHHhh--ccCc---hhHHHHHHHHHHHHHHhhhhhhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhc
Q 009757 407 IAPGIALIGL--TAAK---SPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFV 481 (526)
Q Consensus 407 ~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~ 481 (526)
+...+..+.+ .... ..+.....+.+..+..+......+......++|+....++-.+..+.+.+...-..-...-
T Consensus 97 l~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~ 176 (406)
T KOG1479|consen 97 LFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLRILTKAAFS 176 (406)
T ss_pred HHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHHHHHHHhcC
Confidence 1111222222 1111 1222222333334444555566677777777775544433333333333322222222222
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 482 ELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 482 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
|...+-...|.+..++.+++.+++..+
T Consensus 177 ~~~~sA~~yF~~s~~~~llC~i~y~~l 203 (406)
T KOG1479|consen 177 DSRTSALIYFITSTVILLLCFVLYLVL 203 (406)
T ss_pred CCCceeehhHHHHHHHHHHHHHHHHHh
Confidence 222234556666667777777776644
No 291
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.10 E-value=0.47 Score=46.28 Aligned_cols=71 Identities=3% Similarity=-0.089 Sum_probs=54.3
Q ss_pred hhhhhhHHHHHHhhcc----cchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 437 SFSHSGFLVNLQEIAP----QYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 437 ~~~~~~~~~~~~~~~~----~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
+..=+.......+..+ +++...+..++...++|..++..+.+++.+..| |...|.+.++..+++.+.++.-
T Consensus 48 G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 48 GGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHHHHHhC
Confidence 3334555555555544 256778888999999999999999999999988 9999999998888887766554
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.99 E-value=0.018 Score=54.42 Aligned_cols=110 Identities=15% Similarity=-0.012 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHH---hhhhhcc--------ccchHHHHHHHHHhhhhccch
Q 009757 138 IVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLAT---FLTPWAA--------DTSLLALLAMRAVVGLAEGVA 206 (526)
Q Consensus 138 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~---~~~~~~~--------~~~~~~l~~~r~l~Gig~g~~ 206 (526)
.....+.++-.+|..+.++.-=+..+++.+.+..+.-.+.. ++|-..+ -++-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35667888888888877764211113333333333332222 2221110 034466777889999999999
Q ss_pred hhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHH
Q 009757 207 LPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPI 247 (526)
Q Consensus 207 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~ 247 (526)
....+.+..+..++++|..+..+......+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999898888998888877643
No 293
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.77 E-value=0.2 Score=48.53 Aligned_cols=144 Identities=15% Similarity=0.064 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHH----HhhcCccchhHHHHH
Q 009757 327 WSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDML----IQRGTSVTLTRKILQ 402 (526)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~----~~~~~~~~~~~~~~~ 402 (526)
.......+...+++..=..++++|+++ .|.+....+.+....-+.+.+.+++.|..+||. |||+ ..+
T Consensus 35 i~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR--------PfI 105 (498)
T KOG0637|consen 35 ISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR--------PFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceeccccccccccccccccccc--------chH
Confidence 344444555566666677999999999 799999999988888888999999999999975 5553 233
Q ss_pred HHHHHHHHHHHHhhccCch-------------hHHHHHHHHHHHHHHh----hhhhhHHHHHHhhcc-cchhh-HHHHHH
Q 009757 403 SIGFIAPGIALIGLTAAKS-------------PVMASAWLTLAIGMKS----FSHSGFLVNLQEIAP-QYSGV-LHGISN 463 (526)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~g~-~~g~~~ 463 (526)
........+.+.++..... ....+...++++...- ......-++..++.. +++.+ +++...
T Consensus 106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 3333333333333222111 1122333333332222 233344455666654 44444 888888
Q ss_pred HHHhHHHHHHHHHHhh
Q 009757 464 TAGTFAAILGTVGAGF 479 (526)
Q Consensus 464 ~~~~lg~~~~~~~~g~ 479 (526)
.+..+|+.+|=.+.++
T Consensus 186 ~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSY 201 (498)
T ss_pred HHHHhcceeeeecccc
Confidence 8888888777666553
No 294
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.71 E-value=0.021 Score=53.93 Aligned_cols=42 Identities=21% Similarity=0.292 Sum_probs=0.0
Q ss_pred HHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHH
Q 009757 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLV 243 (526)
Q Consensus 197 ~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~ 243 (526)
++.|++.+.......++.+. +|++. ...+..+.++++++.++
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y----~~a~~~Gq~~aGv~~s~ 46 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY----TQAVMIGQGLAGVIVSL 46 (309)
T ss_dssp -----------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH----HHHHHhhccHHHHHHHH
Confidence 45677777777777777775 55443 33444555555555443
No 295
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.99 E-value=1 Score=44.49 Aligned_cols=66 Identities=9% Similarity=-0.009 Sum_probs=53.5
Q ss_pred HHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchh
Q 009757 191 ALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFG 256 (526)
Q Consensus 191 ~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~ 256 (526)
.+++..++..+..-..+++..++-+++.+|.--|..|.+.++..++|+---..+.-++++.+.++.
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~~ 472 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVAT 472 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhccccc
Confidence 345557777788888889999999999999999999999999999998776666666666655553
No 296
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=92.56 E-value=0.73 Score=42.31 Aligned_cols=144 Identities=15% Similarity=-0.010 Sum_probs=91.8
Q ss_pred HHHHHHHHHHhhhhhhhhcc--hhhhhhhcCCc-cchhhHHHHHHHHHHHHhhhhhhHHHhH-hcChHHHHHHHHHHHHH
Q 009757 102 SMLALALALCNADRVVMSVA--IVPLSLAHGWS-RSFSGIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLA 177 (526)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~s-~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~ 177 (526)
+-++..++..++........ .|. .+.+..+ +.|.-|....|.+|..+..--.-..-=+ .---..+..-.+++.+.
T Consensus 254 vPL~~VY~~EY~INQGl~ell~F~c-~~g~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~ 332 (409)
T KOG3880|consen 254 VPLALVYFAEYFINQGLAELLLFPC-SHGFSLSKDSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLL 332 (409)
T ss_pred HHHHHHHHHHHHHhhhhHhhEEecc-ccCCccchhhcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHH
Confidence 33455566665544433322 122 2333333 3467888888888765543221111000 00011222333444555
Q ss_pred HhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q 009757 178 TFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 178 ~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 248 (526)
..+..+. +++|..++.-+.-|+-.|..++...--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 333 ~a~~~ft--psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 333 QAWYWFT--PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHhc--cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 5566777 99999999999999999999998888888888899999999999999999998887776544
No 297
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.94 E-value=3.3 Score=37.40 Aligned_cols=136 Identities=13% Similarity=0.082 Sum_probs=85.0
Q ss_pred hhHHHHHHHHHHHHhhhhhhHHHhHhcCh--HHHHHHHHHHHHHHhhhhhc--ccc---chHHHHHHHHHhhhhccchhh
Q 009757 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGK--IIMAWGVALWSLATFLTPWA--ADT---SLLALLAMRAVVGLAEGVALP 208 (526)
Q Consensus 136 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~~~~~~~~~~--~~~---~~~~l~~~r~l~Gig~g~~~~ 208 (526)
.|.+.+.+.+..++|+-+..++..|-.+| ..+.+..++.++...+..+. .++ +...-+++-.+.-.+.|.++|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 58999999999999999998888876665 45555555555444432222 111 122224444555566788899
Q ss_pred hhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 009757 209 AMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLV 271 (526)
Q Consensus 209 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~ 271 (526)
..+.+=+++.|++.|...+.++..-.++-..++-..--.-....+-|..|-++.+...+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 999999999999999998888776444432222111000000234677888777766655443
No 298
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=91.58 E-value=6.7 Score=37.57 Aligned_cols=66 Identities=12% Similarity=0.105 Sum_probs=40.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHH-----HHHhhcCc
Q 009757 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD-----MLIQRGTS 393 (526)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~d-----r~~~~~~~ 393 (526)
+.+..+...+.++........ .+|.+++. .|.|-.+.+.....++= .--.+++..+.| |+|||+..
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksW 101 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSW 101 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccce
Confidence 345566666666665555544 88988886 57776666554333221 123356666777 99998543
No 299
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=90.65 E-value=15 Score=34.65 Aligned_cols=143 Identities=18% Similarity=0.195 Sum_probs=84.5
Q ss_pred CCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHH----HHHHH---HHHHHhhhhhccccchHHHHHHHHHhhhh
Q 009757 130 GWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMA----WGVAL---WSLATFLTPWAADTSLLALLAMRAVVGLA 202 (526)
Q Consensus 130 ~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~----~~~~~---~~~~~~~~~~~~~~~~~~l~~~r~l~Gig 202 (526)
|-..-|.+.+.+.|...+.+|+...-++.|.--.-+.+. +|++. ..+..+.+++-..++-+.+++.-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 566778899999999999998888877766433322221 12211 11112222222235678889999999999
Q ss_pred ccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHH-hhcCchhHHHHHHHHHHHHHHHHHh
Q 009757 203 EGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILM-SQAGIFGPFVIFGLSGFLWVLVWLS 274 (526)
Q Consensus 203 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~~gw~~~f~~~~~~~~~~~~~~~~ 274 (526)
.|...|..+.++..-. .+-....+.....-.+|.+.+.++-.++. ...|.--.-...+.+.++..+...+
T Consensus 119 VG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~~f 189 (508)
T COG4262 119 VGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVTLF 189 (508)
T ss_pred HhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888732 22222333333346677777766655543 4455333333445555555444333
No 300
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=90.37 E-value=5.8 Score=40.92 Aligned_cols=169 Identities=16% Similarity=0.106 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHH
Q 009757 331 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPG 410 (526)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 410 (526)
....+-..+++++...+-.|+.+.++.+...+.-....+........+++++++|-+-.|-. .+.++.++..
T Consensus 44 ~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~--------tI~~~s~i~~ 115 (571)
T KOG1237|consen 44 GNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYF--------TINIGSLISL 115 (571)
T ss_pred HHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHH--------HHHHHHHHHH
Confidence 33444455666677788888888889888777777777777778888999999998765521 1112211111
Q ss_pred HHHHh-------hccC-------------chhH---HHHHHHHHHHH--HHhhhhhhHHHHHHhhcc-----c--chhhH
Q 009757 411 IALIG-------LTAA-------------KSPV---MASAWLTLAIG--MKSFSHSGFLVNLQEIAP-----Q--YSGVL 458 (526)
Q Consensus 411 ~~~~~-------~~~~-------------~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----~--~~g~~ 458 (526)
+++.+ .... ..+. ..+....+... ..+..-+.......+-.+ + ....-
T Consensus 116 ~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~f 195 (571)
T KOG1237|consen 116 LGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSF 195 (571)
T ss_pred HHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccc
Confidence 11111 1000 0011 11111111111 111212334444443333 1 33467
Q ss_pred HHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 459 HGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 459 ~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
+..+....++|..++..+.-++.+..| |...|.+..++.++++++++..
T Consensus 196 FnW~yf~~~~g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 196 FNWFYFSQNGGALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHHHcC
Confidence 778888889999999999888888776 8888888888877777766543
No 301
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=88.60 E-value=5.1 Score=38.14 Aligned_cols=159 Identities=15% Similarity=0.149 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHH
Q 009757 325 PTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSI 404 (526)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 404 (526)
....+.+.+++..++--...+-...|+.+-.|-+....+....+-+....+-..+.|...|+..|.|...+.. .+--.
T Consensus 28 ~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L--~lqNl 105 (503)
T KOG2601|consen 28 TVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL--LLQNL 105 (503)
T ss_pred eeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH--hhccH
Confidence 3344556677777777677777777777754544444555545555556666667777888888875432221 11222
Q ss_pred HHHHHHHHHHhhccCc-----hhHHHHHHHHHHHHHHhhhhhhHH----HHHHh--------hcccchhhHHHHHHHHHh
Q 009757 405 GFIAPGIALIGLTAAK-----SPVMASAWLTLAIGMKSFSHSGFL----VNLQE--------IAPQYSGVLHGISNTAGT 467 (526)
Q Consensus 405 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--------~~~~~~g~~~g~~~~~~~ 467 (526)
+.+.++..+....... +..++..++++......+...... ....| -.|.......+..-..-.
T Consensus 106 Sv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq 185 (503)
T KOG2601|consen 106 SVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQ 185 (503)
T ss_pred HHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhh
Confidence 2333322222222111 222333333333222222211111 00111 111222333356666667
Q ss_pred HHHHHHHHHHhhhccccc
Q 009757 468 FAAILGTVGAGFFVELVG 485 (526)
Q Consensus 468 lg~~~~~~~~g~l~~~~g 485 (526)
....+.|.+.|.+....+
T Consensus 186 ~tn~Lapv~tg~Iitfvs 203 (503)
T KOG2601|consen 186 STNLLAPVITGLIITFVS 203 (503)
T ss_pred hhhchhhhhhcccceeec
Confidence 788899999999998766
No 302
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=86.98 E-value=35 Score=34.08 Aligned_cols=43 Identities=9% Similarity=0.046 Sum_probs=37.1
Q ss_pred hHHHHHHhhcc-cchhhHHHHHHHHHhHHHHHHHHHHhhhcccc
Q 009757 442 GFLVNLQEIAP-QYSGVLHGISNTAGTFAAILGTVGAGFFVELV 484 (526)
Q Consensus 442 ~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~ 484 (526)
..+...+|... ++..+-+++.+...+++..+++.+..++.++.
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~ 211 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR 211 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 56777888887 68899999999999999999999999888743
No 303
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=85.54 E-value=25 Score=30.95 Aligned_cols=43 Identities=21% Similarity=0.270 Sum_probs=24.4
Q ss_pred chhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 009757 221 TERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (526)
Q Consensus 221 ~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~ 264 (526)
+++.+.-.......-++..+|..+++++.+..+.+ ..++.+++
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~~ 200 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPALL 200 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 33333444455555666777777777777777743 44444433
No 304
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=84.05 E-value=39 Score=32.07 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=23.9
Q ss_pred HHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHH
Q 009757 349 IYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (526)
Q Consensus 349 ~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (526)
.....-.|-+..+.+.+.+.+-....+|+.+.-++.|
T Consensus 32 tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~d 68 (508)
T COG4262 32 TLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLD 68 (508)
T ss_pred HHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccC
Confidence 3333335667777788877777777777766665544
No 305
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=82.98 E-value=11 Score=35.69 Aligned_cols=94 Identities=14% Similarity=0.028 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhHhcChHHH--HHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHH
Q 009757 137 GIVQSSFLWGYLVSPIAGGTLVDYYGGKIIM--AWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMV 214 (526)
Q Consensus 137 g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l--~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i 214 (526)
|..-++..+..+++.+..|.+--++.|..-+ .++.+.-+...+++.-+ ++.|..+++.++.+.-.....+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t--~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQT--QHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcc--cceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 6667777788888999999998777776433 34444444444445555 8999999888888887777788888888
Q ss_pred hhhcCcchhhHHHHHHHh
Q 009757 215 ARWFPQTERARAVAIAMG 232 (526)
Q Consensus 215 ~~~~~~~~r~~~~~~~~~ 232 (526)
++....+.-|..+|+...
T Consensus 352 A~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHhhhhhhheeeeehHHH
Confidence 888877777777776553
No 306
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=82.52 E-value=16 Score=33.09 Aligned_cols=25 Identities=12% Similarity=-0.145 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH
Q 009757 330 IVANAMHSWGFFVILSWMPIYFNFV 354 (526)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (526)
.+...+.....++....=..|+++.
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3344444455566555555677764
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.83 E-value=6.5 Score=29.59 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=27.4
Q ss_pred cchhhHHHHHHHHHhHHHHHHHHHHhhhccccc
Q 009757 453 QYSGVLHGISNTAGTFAAILGTVGAGFFVELVG 485 (526)
Q Consensus 453 ~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g 485 (526)
+.++.+.++--..-.+++.+.....||+.|++-
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 457788888888888999999999999999753
No 308
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=80.10 E-value=64 Score=31.78 Aligned_cols=30 Identities=23% Similarity=0.212 Sum_probs=19.7
Q ss_pred chhhHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 009757 221 TERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (526)
Q Consensus 221 ~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~ 250 (526)
.+|.+.........-++.++-|+++-+.-.
T Consensus 107 aeR~~~~~~ii~~~l~~~~vy~~~~~w~w~ 136 (399)
T PF00909_consen 107 AERIKFSAYIIFGFLWGGLVYPPLAHWVWG 136 (399)
T ss_dssp CCCCHHHHHHHHHHHCCCCTHHHHHHHHHC
T ss_pred eceeeehHHHHHHHHHhhhhccccceEEEe
Confidence 356666777666666777777777655544
No 309
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.55 E-value=7.7 Score=29.19 Aligned_cols=36 Identities=19% Similarity=0.033 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhhhhhhHHHhHh-cChHHHHHHHHHHH
Q 009757 140 QSSFLWGYLVSPIAGGTLVDYY-GGKIIMAWGVALWS 175 (526)
Q Consensus 140 ~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~ 175 (526)
.+.-+++..+.....||+.||| |.++..++..++.+
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 3444555566666779999997 66665555444433
No 310
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=78.22 E-value=1e+02 Score=33.12 Aligned_cols=36 Identities=14% Similarity=0.024 Sum_probs=20.9
Q ss_pred HHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 009757 230 AMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLSG 265 (526)
Q Consensus 230 ~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~ 265 (526)
...+..++.++..+++.+++..++|..++++.++++
T Consensus 106 l~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 106 LVPVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 333445555555555555545567777777766654
No 311
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=78.03 E-value=45 Score=34.21 Aligned_cols=68 Identities=9% Similarity=0.183 Sum_probs=28.7
Q ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhc-CCcchhhhHhhHhHHHHHHHHHHHHHHHHHH
Q 009757 318 RRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYH-IDLRQASWFSAVPWSVMAFTGYLGGLLSDML 387 (526)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~ 387 (526)
.++||.|+-. ..+..++..+....+......++.- .| +++..-|.+.....+..++++.++|+.+-|+
T Consensus 252 gDVFR~P~~~-~lls~lvG~G~Qll~~~~~~~~~a~-~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~ 320 (521)
T PF02990_consen 252 GDVFRPPKHP-MLLSALVGTGIQLLFMALVTLFFAA-LGFLSPNNRGSLLTAAIILYALTSFIAGYVSARL 320 (521)
T ss_pred HHHhcCcCCc-hHHHhHhcchhhhhHHHHHHHHHHH-hhhccccCcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4678877632 2222222222222223333333332 33 3444444444444444444455555554444
No 312
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=77.72 E-value=19 Score=32.68 Aligned_cols=104 Identities=14% Similarity=0.145 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHhH-hcChHHHH----HHHHHHHHHHhhhhhc-cc--cchHHHHHHHHHhhhhccchhh
Q 009757 137 GIVQSSFLWGYLVSPIAGGTLVDY-YGGKIIMA----WGVALWSLATFLTPWA-AD--TSLLALLAMRAVVGLAEGVALP 208 (526)
Q Consensus 137 g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~~-~~--~~~~~l~~~r~l~Gig~g~~~~ 208 (526)
....-++..|..+|.+..|.+... +.||+.+. .+.+...++.++.+.. .. .++..+++.-++.|+..=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 334445666677777888888764 45555433 3344444444442121 11 1356678888888877544444
Q ss_pred hhHHHHhhhc---CcchhhHHHHHHHhhhhhHHHHH
Q 009757 209 AMNNMVARWF---PQTERARAVAIAMGGFTSGNAIG 241 (526)
Q Consensus 209 ~~~~~i~~~~---~~~~r~~~~~~~~~~~~~G~~ig 241 (526)
+... +..-+ +|++-|...|+....+.+...+.
T Consensus 224 ViL~-lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~ 258 (267)
T PF07672_consen 224 VILN-LPHEYKGYNPKKIGIQFGLIWGFGYIFYTIY 258 (267)
T ss_pred HHhc-ChhhhcCCCcceehhHHHHHHHHHHHHHHHH
Confidence 3322 33333 23444555554444433333333
No 313
>PRK10263 DNA translocase FtsK; Provisional
Probab=77.24 E-value=50 Score=37.38 Aligned_cols=23 Identities=9% Similarity=-0.210 Sum_probs=14.2
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhh
Q 009757 368 VPWSVMAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 368 ~~~~~~~i~~~~~g~l~dr~~~~ 390 (526)
+.+.++.+|..+...+..-+|.-
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl~ 82 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGVM 82 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhHH
Confidence 44566666776666666666643
No 314
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=74.11 E-value=1.2e+02 Score=31.68 Aligned_cols=31 Identities=16% Similarity=-0.019 Sum_probs=18.8
Q ss_pred CcchhhhHhhHhHHHHHHHHHHHHHHHHHHH
Q 009757 358 DLRQASWFSAVPWSVMAFTGYLGGLLSDMLI 388 (526)
Q Consensus 358 s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~ 388 (526)
+....+..+..++++..+--++.+....|+.
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~l 353 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKLL 353 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4445566667777777665565665555543
No 315
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=63.68 E-value=81 Score=32.40 Aligned_cols=34 Identities=9% Similarity=-0.079 Sum_probs=26.8
Q ss_pred chhhhHhhHhHHHHHHHHHHHHHHHHHHHhhcCc
Q 009757 360 RQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTS 393 (526)
Q Consensus 360 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~~~~ 393 (526)
.........+.+.+.+++..++++...++.+++.
T Consensus 297 ~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~ 330 (521)
T PF02990_consen 297 SLLTAAIILYALTSFIAGYVSARLYKSFGGKKWK 330 (521)
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCcee
Confidence 3455566677888899999999999999887554
No 316
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=63.56 E-value=1.8e+02 Score=29.66 Aligned_cols=38 Identities=13% Similarity=0.056 Sum_probs=29.5
Q ss_pred HHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHh
Q 009757 350 YFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (526)
Q Consensus 350 ~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (526)
+..+ -.+..++.-.+...++++-++.+++|.+...+.+
T Consensus 168 fAN~--itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 168 FANE--ITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHh--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444 3567788888888888888888888888887776
No 317
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=63.32 E-value=76 Score=26.67 Aligned_cols=58 Identities=17% Similarity=0.141 Sum_probs=32.9
Q ss_pred hcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc------CchhHHHHHHHHHHHHHHHHHh
Q 009757 217 WFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA------GIFGPFVIFGLSGFLWVLVWLS 274 (526)
Q Consensus 217 ~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~------gw~~~f~~~~~~~~~~~~~~~~ 274 (526)
.+|.+++.+..+.+.++.-.+...--.+=+.+.... .+...+++.++++.+..++.-.
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~ 77 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNS 77 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcc
Confidence 345555566666555555444444444434443322 4777888888888776665433
No 318
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=61.50 E-value=18 Score=27.39 Aligned_cols=52 Identities=19% Similarity=0.112 Sum_probs=44.6
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhc
Q 009757 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (526)
Q Consensus 133 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 184 (526)
++..|-+.++|.-.+.+.++.+++..|+.-+.+.=.+|..+..++..+..+.
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3567889999999999999999999999999888888888888887776554
No 319
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=60.49 E-value=1.1e+02 Score=29.09 Aligned_cols=13 Identities=8% Similarity=0.069 Sum_probs=10.8
Q ss_pred cchHHHHHHHHHh
Q 009757 187 TSLLALLAMRAVV 199 (526)
Q Consensus 187 ~~~~~l~~~r~l~ 199 (526)
-.||++++.|++.
T Consensus 203 fayWLFYiVri~~ 215 (531)
T KOG3814|consen 203 FAYWLFYIVRILD 215 (531)
T ss_pred HHHHHHHhhhhhc
Confidence 4689999999876
No 320
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=60.02 E-value=49 Score=27.24 Aligned_cols=28 Identities=14% Similarity=0.233 Sum_probs=20.5
Q ss_pred HHHHhhcccchhhHHHHHHHHHhHHHHH
Q 009757 445 VNLQEIAPQYSGVLHGISNTAGTFAAIL 472 (526)
Q Consensus 445 ~~~~~~~~~~~g~~~g~~~~~~~lg~~~ 472 (526)
++.+...|+..|...|+-.+-.+++.+.
T Consensus 118 ilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 118 ILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3445566778999999988888776554
No 321
>PTZ00370 STEVOR; Provisional
Probab=59.96 E-value=8.4 Score=34.89 Aligned_cols=38 Identities=11% Similarity=0.137 Sum_probs=22.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhcCceecccccc
Q 009757 483 LVGSFQGFLLLTSLLYFLSALFYIIFSTGERVNFDEAG 520 (526)
Q Consensus 483 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (526)
.+.+|..+-++..++.++-++++.++.++++..|+.+.
T Consensus 253 aF~Pygiaalvllil~vvliilYiwlyrrRK~swkhe~ 290 (296)
T PTZ00370 253 AFYPYGIAALVLLILAVVLIILYIWLYRRRKNSWKHEC 290 (296)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 34456666666666666666666666666666665443
No 322
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=59.81 E-value=1.9e+02 Score=28.83 Aligned_cols=40 Identities=8% Similarity=0.107 Sum_probs=26.9
Q ss_pred cchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcCchhHHHHHHHH
Q 009757 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMSQAGIFGPFVIFGLS 264 (526)
Q Consensus 220 ~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~ 264 (526)
+++.+...++.+++.+.|.+.-|+..+. +|-++..+..++
T Consensus 19 ~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll 58 (443)
T PRK13629 19 KSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVL 58 (443)
T ss_pred cccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHH
Confidence 4567788888888888888888877654 344444444433
No 323
>PRK10263 DNA translocase FtsK; Provisional
Probab=58.86 E-value=1.2e+02 Score=34.62 Aligned_cols=19 Identities=37% Similarity=0.399 Sum_probs=9.3
Q ss_pred hHHHHHHHHHHHHHhhcCc
Q 009757 236 SGNAIGLVLSPILMSQAGI 254 (526)
Q Consensus 236 ~G~~ig~~l~~~l~~~~gw 254 (526)
.|+++|..++.++...+|.
T Consensus 142 gGGIIG~lLs~lL~~LfG~ 160 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHS 160 (1355)
T ss_pred ccchHHHHHHHHHHHHHhH
Confidence 3555555555555444443
No 324
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=57.01 E-value=1.6e+02 Score=28.38 Aligned_cols=34 Identities=18% Similarity=0.013 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHH
Q 009757 136 SGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (526)
Q Consensus 136 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 171 (526)
...+.+...+-..+.+.+.+ .||+...|++....
T Consensus 188 ~TilSStSs~FtL~la~if~--~e~ft~sKllav~~ 221 (416)
T KOG2765|consen 188 TTILSSTSSFFTLFLAAIFP--VERFTLSKLLAVFV 221 (416)
T ss_pred hhhhhhcchHHHHHHHHHcC--cchhhHHHHHHHHH
Confidence 34444444444444444444 89999888765433
No 325
>PRK02237 hypothetical protein; Provisional
Probab=56.03 E-value=30 Score=26.27 Aligned_cols=51 Identities=16% Similarity=0.011 Sum_probs=43.5
Q ss_pred chhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhc
Q 009757 134 SFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (526)
Q Consensus 134 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 184 (526)
+..|-+.++|.-.+.+.++.+++..|+.-+-+.=.+|..+..++..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 447889999999999999999999999988888888888888887766554
No 326
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=55.86 E-value=2.1e+02 Score=28.17 Aligned_cols=19 Identities=37% Similarity=0.219 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 009757 373 MAFTGYLGGLLSDMLIQRG 391 (526)
Q Consensus 373 ~~i~~~~~g~l~dr~~~~~ 391 (526)
...+..+...+.|+..++|
T Consensus 235 A~a~g~l~~~~~~~~~~gk 253 (403)
T TIGR00836 235 AAAAGGLTWLLIDWLKHGK 253 (403)
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 3344445556677765543
No 327
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=54.23 E-value=66 Score=29.90 Aligned_cols=35 Identities=17% Similarity=0.131 Sum_probs=15.7
Q ss_pred HHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhcc
Q 009757 169 WGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEG 204 (526)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g 204 (526)
.+.++++++.++..+.. ++.|.+.+.-++.+++.+
T Consensus 4 ~~~~~~~~~s~~~~l~~-~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLF-PYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHH
Confidence 34444434444433331 444555555555555443
No 328
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=53.89 E-value=2e+02 Score=27.12 Aligned_cols=30 Identities=13% Similarity=0.172 Sum_probs=15.4
Q ss_pred HHHHHHHHHhhhhccch-hhhhHHHHhhhcC
Q 009757 190 LALLAMRAVVGLAEGVA-LPAMNNMVARWFP 219 (526)
Q Consensus 190 ~~l~~~r~l~Gig~g~~-~~~~~~~i~~~~~ 219 (526)
+.-.+.-.+.+++.|.+ +.+..-++.|...
T Consensus 261 ~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~ 291 (317)
T PF02535_consen 261 SSDIVSGILLAFAAGTFLYVAFVELLPEEFH 291 (317)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445556667776643 3333345555554
No 329
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=52.73 E-value=92 Score=26.89 Aligned_cols=11 Identities=18% Similarity=0.621 Sum_probs=6.5
Q ss_pred HHHhHHHHHHH
Q 009757 343 ILSWMPIYFNF 353 (526)
Q Consensus 343 ~~~~~~~~~~~ 353 (526)
+..|.|.+...
T Consensus 113 igIYiP~Fa~~ 123 (191)
T PF03596_consen 113 IGIYIPLFASL 123 (191)
T ss_pred EEEeehhhhcC
Confidence 45677766543
No 330
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=51.32 E-value=1.9e+02 Score=26.22 Aligned_cols=21 Identities=14% Similarity=0.078 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 009757 371 SVMAFTGYLGGLLSDMLIQRG 391 (526)
Q Consensus 371 ~~~~i~~~~~g~l~dr~~~~~ 391 (526)
++..+.-+-+-.++.|+..|+
T Consensus 251 lCT~lAVigGk~lAskIS~rt 271 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRT 271 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEE
Confidence 333444344445677777773
No 331
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=49.24 E-value=1.8e+02 Score=27.03 Aligned_cols=82 Identities=13% Similarity=0.143 Sum_probs=42.7
Q ss_pred HHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhc--CchhHH--HHHHHHHHH
Q 009757 192 LLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQA--GIFGPF--VIFGLSGFL 267 (526)
Q Consensus 192 l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~--gw~~~f--~~~~~~~~~ 267 (526)
.-..|.+.|+-.-. +...++++.-.||++++-...--.....+++.++-+++|-.+ +.. |.+..- ...+++.++
T Consensus 22 ~~~lr~~~g~~~vl-f~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l-~~~~~~i~~~~i~~~l~~~t~~ 99 (287)
T PF07760_consen 22 IPPLRVILGFPFVL-FLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL-NYTPWGIRLIPILISLSIFTLV 99 (287)
T ss_pred hhHHHHHHHHHHHH-HhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH-HhccCCcchhHHHHHHHHHHHH
Confidence 45668777776544 456788899999855443333333334444445555554443 433 333322 223444444
Q ss_pred HHHHHHhh
Q 009757 268 WVLVWLSA 275 (526)
Q Consensus 268 ~~~~~~~~ 275 (526)
+.++....
T Consensus 100 ~~~~a~~r 107 (287)
T PF07760_consen 100 LSIIAYIR 107 (287)
T ss_pred HHHHHHHh
Confidence 44444443
No 332
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=48.41 E-value=96 Score=25.56 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=25.1
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhHHHhHhcCh
Q 009757 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGK 164 (526)
Q Consensus 133 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr 164 (526)
+..+.++.+...++..+..+-.|.|+-.+...
T Consensus 95 P~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 34567788888888888888889998888654
No 333
>PRK00187 multidrug efflux protein NorA; Provisional
Probab=48.40 E-value=3e+02 Score=27.71 Aligned_cols=12 Identities=17% Similarity=0.124 Sum_probs=7.3
Q ss_pred hhhHHHhHhcCh
Q 009757 153 AGGTLVDYYGGK 164 (526)
Q Consensus 153 ~~G~l~dr~Grr 164 (526)
.....+.++|.|
T Consensus 69 ~~~i~aq~~Ga~ 80 (464)
T PRK00187 69 VGTLVAIRHGAG 80 (464)
T ss_pred HHHHHHHHhcCC
Confidence 334567777765
No 334
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=47.57 E-value=2.4e+02 Score=26.34 Aligned_cols=81 Identities=14% Similarity=0.080 Sum_probs=46.4
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhH---hcChHHHHHHH
Q 009757 95 SERVKVVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDY---YGGKIIMAWGV 171 (526)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr---~Grr~~l~~~~ 171 (526)
+++....+.+...+++.-+..+.++-.+..+.+..+.-....+++.++..... +.+-.++ ||.||.=+++.
T Consensus 21 ~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~------a~r~~~~~~TfGy~R~eiLaa 94 (296)
T COG1230 21 ERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKL------ARRPATKRFTFGYKRLEILAA 94 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCccHhHHHHHHH
Confidence 34445555555566655565566666677777777766666666555433322 2222232 68888766666
Q ss_pred HHHHHHHhhh
Q 009757 172 ALWSLATFLT 181 (526)
Q Consensus 172 ~~~~~~~~~~ 181 (526)
++.++..+..
T Consensus 95 ~~nav~Li~~ 104 (296)
T COG1230 95 FLNALLLIVV 104 (296)
T ss_pred HHHHHHHHHH
Confidence 6666554443
No 335
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=47.18 E-value=46 Score=29.38 Aligned_cols=53 Identities=19% Similarity=0.295 Sum_probs=37.1
Q ss_pred HHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHH
Q 009757 195 MRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPIL 248 (526)
Q Consensus 195 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 248 (526)
.-.-.|+|.|..+.++..-+.+.+| +......++....+-+..+.|-...-++
T Consensus 177 LAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 177 LAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455799999999999999999996 5556667666666666655555544433
No 336
>COG3619 Predicted membrane protein [Function unknown]
Probab=45.53 E-value=2.2e+02 Score=25.35 Aligned_cols=31 Identities=3% Similarity=-0.024 Sum_probs=17.6
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhHHHhHhcC
Q 009757 133 RSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG 163 (526)
Q Consensus 133 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr 163 (526)
+...........+...++......+..|..|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4445566666667777775554444444443
No 337
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=45.08 E-value=3e+02 Score=26.76 Aligned_cols=18 Identities=22% Similarity=0.364 Sum_probs=10.4
Q ss_pred HHHHcCchHHHHHHHHHH
Q 009757 318 RRLLSKMPTWSIIVANAM 335 (526)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~ 335 (526)
++.+++|.++...+...+
T Consensus 239 ~~~~~nP~~~a~~lgli~ 256 (385)
T PF03547_consen 239 LKLFKNPPLIAIILGLII 256 (385)
T ss_pred HHHHhCcHHHHHHHHHHH
Confidence 455667776665554443
No 338
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=44.65 E-value=1.2e+02 Score=32.33 Aligned_cols=50 Identities=16% Similarity=0.089 Sum_probs=30.4
Q ss_pred hHHHhH----hcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccc
Q 009757 155 GTLVDY----YGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (526)
Q Consensus 155 G~l~dr----~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~ 205 (526)
+-++|. -||.+-++++.++++++.+...+.. +..|.+..+-++.+++.++
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~-~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLF-GKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHH
Confidence 455553 3566777788888887777666552 4455555555555555433
No 339
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=43.93 E-value=1.1e+02 Score=32.86 Aligned_cols=51 Identities=14% Similarity=0.100 Sum_probs=31.3
Q ss_pred hhHHHhH----hcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccc
Q 009757 154 GGTLVDY----YGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGV 205 (526)
Q Consensus 154 ~G~l~dr----~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~ 205 (526)
++-+.|. .||.+-++++.++++++++...+.. +..|.+...-++.+++.++
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~-~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLF-PKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHH
Confidence 3445553 3566778888888888887766652 4445555555555555443
No 340
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=43.65 E-value=3.3e+02 Score=26.85 Aligned_cols=18 Identities=28% Similarity=0.265 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 009757 373 MAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 373 ~~i~~~~~g~l~dr~~~~ 390 (526)
...+..+...+.++...+
T Consensus 249 a~a~g~l~~~~~~~~~~g 266 (404)
T TIGR03644 249 AAAGGAIAALLLTKLLFG 266 (404)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 334445555556665444
No 341
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=42.33 E-value=84 Score=26.89 Aligned_cols=24 Identities=17% Similarity=0.450 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhhhhhHHHhHhcCh
Q 009757 141 SSFLWGYLVSPIAGGTLVDYYGGK 164 (526)
Q Consensus 141 s~~~~~~~~~~~~~G~l~dr~Grr 164 (526)
.-|.+++.+.+.+.|++.||..+|
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~~ 112 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRKR 112 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcc
Confidence 456778889999999999998863
No 342
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=41.77 E-value=98 Score=25.46 Aligned_cols=41 Identities=10% Similarity=0.169 Sum_probs=27.0
Q ss_pred HHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhh
Q 009757 141 SSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLT 181 (526)
Q Consensus 141 s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 181 (526)
.-|.+++.+...+.|++.+|..+++..........++.+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 36678888899999999999888643333333334444433
No 343
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=41.42 E-value=3.8e+02 Score=26.81 Aligned_cols=147 Identities=10% Similarity=-0.078 Sum_probs=75.5
Q ss_pred hhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCChhHHHH
Q 009757 215 ARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQ-AGIFGPFVIFGLSGFLWVLVWLSATSSTPDRHPQISKYELEY 293 (526)
Q Consensus 215 ~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (526)
.|..|+++|...........+.-..++....|.+... .+++...+...+-.++..+...+.--.-++..-+
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Glp-------- 82 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGLP-------- 82 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC--------
Confidence 4566777775554555555555555555555544333 5666665554444444333333322111211100
Q ss_pred HHHhcccccccCCCCCCCCCCchHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHH
Q 009757 294 ILREKQKPLLMGNKHKPATVIPPFRRLLSKMPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVM 373 (526)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 373 (526)
....-|..|-.+.-+...+...+...+.++++.++.-.... .. +.....+...+.++..
T Consensus 83 -------------------qmi~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~-~~-~~~~~~~~ili~g~l~ 141 (442)
T COG1457 83 -------------------QMILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG-SG-TGLPVWAGILIIGVLM 141 (442)
T ss_pred -------------------hheeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc-cC-CCCcHHHHHHHHHHHH
Confidence 00011123333334455555556666777766665544311 12 3334555566667777
Q ss_pred HHHHHHHHHHHHHHHhh
Q 009757 374 AFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 374 ~i~~~~~g~l~dr~~~~ 390 (526)
.+..+++-+...++.|-
T Consensus 142 ~l~~ifG~r~l~~l~~~ 158 (442)
T COG1457 142 TLVTIFGYRALHKLERI 158 (442)
T ss_pred HHHHHHhHHHHHHHHHH
Confidence 88888888888888766
No 344
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=40.01 E-value=2.9e+02 Score=26.86 Aligned_cols=17 Identities=24% Similarity=0.116 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009757 371 SVMAFTGYLGGLLSDML 387 (526)
Q Consensus 371 ~~~~i~~~~~g~l~dr~ 387 (526)
+..++..+..|++..|.
T Consensus 6 i~~i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 33445555666776665
No 345
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=39.86 E-value=38 Score=30.78 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=19.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCceeccc
Q 009757 485 GSFQGFLLLTSLLYFLSALFYIIFSTGERVNFD 517 (526)
Q Consensus 485 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (526)
.+|..+-++..++.++-++++.++.++++..|+
T Consensus 259 ~Pcgiaalvllil~vvliiLYiWlyrrRK~swk 291 (295)
T TIGR01478 259 LPYGIAALVLIILTVVLIILYIWLYRRRKKSWK 291 (295)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 346666555555555555666666666665554
No 346
>PRK10995 inner membrane protein; Provisional
Probab=38.09 E-value=2.7e+02 Score=24.68 Aligned_cols=65 Identities=11% Similarity=-0.042 Sum_probs=32.4
Q ss_pred hhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHH
Q 009757 441 SGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFY 505 (526)
Q Consensus 441 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 505 (526)
+.......+..+++|-+..--.......-..+....+..+.+.+|-....+-+.+.+.+...-+-
T Consensus 26 pif~~lt~~~~~~~r~~ia~~~~~~a~~ill~f~~~G~~il~~fgIs~~a~rIaGGilL~~igi~ 90 (221)
T PRK10995 26 ALFLGLSGNMTPEERNRQALMASVYVFAIMMVAFYAGQLVMSTFGISIPGLRIAGGLIVAFIGFR 90 (221)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 33445555555543332222222222333344555556666767755667777766655444433
No 347
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=36.04 E-value=3.6e+02 Score=25.02 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=21.3
Q ss_pred hHHHHHcCchHHHHHHHHHHHHHHHHHHHHhHH
Q 009757 316 PFRRLLSKMPTWSIIVANAMHSWGFFVILSWMP 348 (526)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (526)
.++++.|+|+.+..................|.+
T Consensus 61 ~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 61 ELKQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 456788888877776666655555555555544
No 348
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=36.04 E-value=96 Score=27.50 Aligned_cols=34 Identities=18% Similarity=0.066 Sum_probs=22.9
Q ss_pred HHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHH
Q 009757 352 NFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSD 385 (526)
Q Consensus 352 ~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~d 385 (526)
.|.||.+..+.--.++.+-.+.++|+++.+.+..
T Consensus 131 ~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas 164 (241)
T PF11299_consen 131 SEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLAS 164 (241)
T ss_pred ehhcCCCCccccceEEEeeehhhHHHHHHHHHHH
Confidence 4667887777666666766677777766666544
No 349
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=36.01 E-value=3e+02 Score=24.08 Aligned_cols=63 Identities=6% Similarity=0.037 Sum_probs=32.0
Q ss_pred hhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHH
Q 009757 441 SGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSAL 503 (526)
Q Consensus 441 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 503 (526)
+......++..+++|-+..--......+...+....+.++.+.+|--...|-+.+.+.+...-
T Consensus 22 p~f~~lt~~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia 84 (203)
T PF01914_consen 22 PIFLSLTKGMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIA 84 (203)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 334455555655544443333333334444445555666666666445556666655544333
No 350
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=35.04 E-value=53 Score=23.36 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=16.9
Q ss_pred HHHHHHHhhhccccchhHHHHHHHHHHHHHHHHH
Q 009757 471 ILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALF 504 (526)
Q Consensus 471 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 504 (526)
.+.+++.|++.+. +...+...++..++++++
T Consensus 21 ~iisfi~Gy~~q~---~~~~~~~~~~g~~~~~lv 51 (76)
T PF06645_consen 21 AIISFIVGYITQS---FSYTFYIYGAGVVLTLLV 51 (76)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhh
Confidence 4455677777774 445555544444444443
No 351
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=34.94 E-value=6.1e+02 Score=27.35 Aligned_cols=20 Identities=10% Similarity=0.115 Sum_probs=8.2
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 009757 487 FQGFLLLTSLLYFLSALFYI 506 (526)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~ 506 (526)
+..+++..+.+.+..++.++
T Consensus 293 ~~L~li~l~~~~l~~l~~~~ 312 (709)
T COG2274 293 WKLTLIVLAAIPLNVLITLI 312 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444444444433333333
No 352
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=31.52 E-value=1.5e+02 Score=19.28 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=21.4
Q ss_pred HHHHHHHHhhhhhhHHHhH-hcChHHHHHHHHHHHHH
Q 009757 142 SFLWGYLVSPIAGGTLVDY-YGGKIIMAWGVALWSLA 177 (526)
Q Consensus 142 ~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~ 177 (526)
.......+.....|+..|+ +|.++...+..++.++.
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 3445555666677888886 47766555544444443
No 353
>COG4769 Predicted membrane protein [Function unknown]
Probab=30.65 E-value=89 Score=25.92 Aligned_cols=51 Identities=12% Similarity=0.111 Sum_probs=32.0
Q ss_pred HHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhh
Q 009757 144 LWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLA 202 (526)
Q Consensus 144 ~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig 202 (526)
.+...+.+...=++..++|+|..-.++...++ ++. +|..++.+.+++.+-.
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~mG------aF~--hNl~QLivas~Lv~~~ 133 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGISVMG------AFT--HNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeehhhHH------HHH--HhHHHHHHHHHHHhcc
Confidence 33444555555677778888876444443332 455 7888888888877644
No 354
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=29.53 E-value=18 Score=32.63 Aligned_cols=12 Identities=25% Similarity=0.622 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHh
Q 009757 498 YFLSALFYIIFS 509 (526)
Q Consensus 498 ~~~~~~~~~~~~ 509 (526)
+++++++++.+.
T Consensus 175 LFlaiLIWlY~H 186 (381)
T PF05297_consen 175 LFLAILIWLYVH 186 (381)
T ss_dssp ------------
T ss_pred HHHHHHHHHHhc
Confidence 344555555543
No 355
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=28.92 E-value=79 Score=24.17 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=23.1
Q ss_pred hhcCchhHHHHHHHHHHHHHHHHHhhccCCC
Q 009757 250 SQAGIFGPFVIFGLSGFLWVLVWLSATSSTP 280 (526)
Q Consensus 250 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 280 (526)
+..+|+.+|++...++++.+.+.+.+.||..
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4567999999877777777777777776653
No 356
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=28.61 E-value=3.9e+02 Score=23.13 Aligned_cols=35 Identities=17% Similarity=-0.048 Sum_probs=27.4
Q ss_pred cCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhh
Q 009757 356 HIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 356 g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (526)
.-|+.+....+..++++..+..+..+.+..+.+++
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 34677778888889999888888888887777665
No 357
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=28.50 E-value=2.8e+02 Score=21.42 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHH
Q 009757 398 RKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLA 432 (526)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (526)
|.+.+.+.+++..+.+..+.+.+..+.....++++
T Consensus 12 R~~al~lif~g~~vmy~gi~f~~~~~im~ifmllG 46 (114)
T PF11023_consen 12 RTFALSLIFIGMIVMYIGIFFKASPIIMVIFMLLG 46 (114)
T ss_pred HHHHHHHHHHHHHHHhhhhhhcccHHHHHHHHHHH
Confidence 33444444455555555544445555554444444
No 358
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=28.10 E-value=90 Score=30.76 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=16.4
Q ss_pred hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcC
Q 009757 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGG 163 (526)
Q Consensus 125 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr 163 (526)
+-+.+|+++...|+. +...|..+--++...+..|-|-
T Consensus 450 iGeT~gIp~eIMGLT--iLAAGTSIPDlitSvIVARKGl 486 (588)
T KOG1307|consen 450 IGETLGIPDEIMGLT--ILAAGTSIPDLITSVIVARKGL 486 (588)
T ss_pred cccccCCCHHHhhhh--hhhcCCchHHhhHhhhhccccc
Confidence 344556665555532 2223333334444444444443
No 359
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=27.06 E-value=2.9e+02 Score=21.18 Aligned_cols=37 Identities=16% Similarity=0.323 Sum_probs=23.6
Q ss_pred HHHcCchH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 009757 319 RLLSKMPT-WSIIVANAMHSWGFFVILSWMPIYFNFVY 355 (526)
Q Consensus 319 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (526)
+.+++.++ ........++.+++.....+..+++.+.+
T Consensus 43 r~l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L 80 (106)
T PF11872_consen 43 RLLSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQL 80 (106)
T ss_pred HHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444443 34455555666788888888888888753
No 360
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=26.81 E-value=4.5e+02 Score=25.54 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=21.1
Q ss_pred hhhhhcchhhhhhhcCCccchhhHHH
Q 009757 115 RVVMSVAIVPLSLAHGWSRSFSGIVQ 140 (526)
Q Consensus 115 ~~~~~~~~~~l~~~~~~s~~~~g~~~ 140 (526)
.-.+...+....+++|+++...|.+.
T Consensus 238 Ae~lv~sIe~~v~~~Glp~afiGvII 263 (366)
T PRK10599 238 TKMNASPLETLLTSMNAPVAFTGFLV 263 (366)
T ss_pred HHHhHhhHHHHHHhcCCCHHHHHHHH
Confidence 34566677888999999999999876
No 361
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.54 E-value=2.8e+02 Score=21.06 Aligned_cols=29 Identities=14% Similarity=0.172 Sum_probs=15.4
Q ss_pred HHhhhhhhHHHhH-hcChHHHHHHHHHHHH
Q 009757 148 LVSPIAGGTLVDY-YGGKIIMAWGVALWSL 176 (526)
Q Consensus 148 ~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~ 176 (526)
.+.....|.+.|+ +|-++.+.+.+++.++
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 3445556777775 5655544444444433
No 362
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=25.99 E-value=73 Score=24.05 Aligned_cols=53 Identities=15% Similarity=0.020 Sum_probs=42.1
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHhhhhhc
Q 009757 132 SRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATFLTPWA 184 (526)
Q Consensus 132 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 184 (526)
+....|-..++|.-.+.+.++.+++..|+.-+-+-=.+|..+..++..+..+.
T Consensus 53 ~~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 53 PAAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred CchhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 34556888889999999999999999999888777777777777776655444
No 363
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=25.74 E-value=3.2e+02 Score=21.25 Aligned_cols=44 Identities=20% Similarity=0.164 Sum_probs=22.1
Q ss_pred hhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHH
Q 009757 125 LSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGV 171 (526)
Q Consensus 125 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 171 (526)
+....+.++....+.. .+...++.+++|..+-|.-++|-++.|.
T Consensus 28 ll~~~~~~e~~~~~~~---~~i~~ls~~~GG~~a~~~~~~kG~l~G~ 71 (116)
T PF12670_consen 28 LLYFTSLSESILPWLV---VIIYILSVFIGGFYAGRKAGSKGWLHGL 71 (116)
T ss_pred HHHHcCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 3334456665555443 3344555556666655554444444433
No 364
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=25.72 E-value=2.8e+02 Score=24.32 Aligned_cols=55 Identities=18% Similarity=0.205 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHH
Q 009757 373 MAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMK 436 (526)
Q Consensus 373 ~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (526)
+.+|..+..++.+|+.+. .....++....++.-......+....+...+++...+
T Consensus 16 ~iiG~l~~~klper~k~~---------l~~~~Gl~~l~iGI~m~~~~~n~~~~ilslv~G~vIG 70 (228)
T COG1811 16 GIIGLLIGKKLPERIKDI---------LMQCLGLAILGIGIKMALQAKNDIMILLALVIGAVIG 70 (228)
T ss_pred HHHHHHHcccCcHHHHHH---------HHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 344444444455555443 4555666666666655556666666666665555443
No 365
>PRK02935 hypothetical protein; Provisional
Probab=25.08 E-value=3.1e+02 Score=20.84 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHH
Q 009757 398 RKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAI 433 (526)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (526)
|.+.+.+.++...+.++...+..+.+.....+++++
T Consensus 13 Rt~aL~lvfiG~~vMy~Giff~~~~~~m~ifm~~G~ 48 (110)
T PRK02935 13 RTFALSLVFIGFIVMYLGIFFRESIIIMTIFMLLGF 48 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 344445555555555555555555555444444433
No 366
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=24.72 E-value=2.7e+02 Score=24.06 Aligned_cols=47 Identities=15% Similarity=-0.015 Sum_probs=26.6
Q ss_pred hhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhh---------hhhhHHHhHhcChH
Q 009757 116 VVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSP---------IAGGTLVDYYGGKI 165 (526)
Q Consensus 116 ~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~---------~~~G~l~dr~Grr~ 165 (526)
-.++...|.+.. .+..+.......+.+...+.. +..+...+|||++-
T Consensus 111 DNigIYiP~Fa~---~s~~~l~v~l~vF~ilv~v~c~la~~l~~~p~i~~~leryg~~l 166 (191)
T PF03596_consen 111 DNIGIYIPLFAS---LSLAELIVILIVFLILVGVWCFLAYKLARIPIIAEFLERYGRWL 166 (191)
T ss_pred CeEEEeehhhhc---CCHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHhcccH
Confidence 356677777764 455555555555444444333 33366677788764
No 367
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=24.06 E-value=2e+02 Score=18.26 Aligned_cols=32 Identities=22% Similarity=0.192 Sum_probs=14.3
Q ss_pred HHHHHHHHHHhhcC----chhHHHHHHHHHHHHHHH
Q 009757 240 IGLVLSPILMSQAG----IFGPFVIFGLSGFLWVLV 271 (526)
Q Consensus 240 ig~~l~~~l~~~~g----w~~~f~~~~~~~~~~~~~ 271 (526)
+|..+++++...++ +.+.-++.+++..+.++.
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~ 41 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLF 41 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHH
Confidence 44444444444333 344444555554444433
No 368
>PRK10712 PTS system fructose-specific transporter subunits IIBC; Provisional
Probab=23.50 E-value=7.1e+02 Score=25.94 Aligned_cols=23 Identities=17% Similarity=0.172 Sum_probs=13.5
Q ss_pred HHHhhcCchhHHHHHHHHHHHHH
Q 009757 247 ILMSQAGIFGPFVIFGLSGFLWV 269 (526)
Q Consensus 247 ~l~~~~gw~~~f~~~~~~~~~~~ 269 (526)
.+.+..++-.+|.+.+.+.+...
T Consensus 229 hlmtGvS~mlP~vv~gGil~ai~ 251 (563)
T PRK10712 229 HLLTGVSYMLPMVVAGGLCIALS 251 (563)
T ss_pred HHHhhhhHHHHHHHHhHHHHHHH
Confidence 34444566777877776654433
No 369
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]
Probab=23.41 E-value=5.9e+02 Score=24.88 Aligned_cols=106 Identities=9% Similarity=0.029 Sum_probs=57.1
Q ss_pred hhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHH-HHHHHHhh---hhhccccchHHHHHHHHHhhhhccchhhhh
Q 009757 135 FSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVA-LWSLATFL---TPWAADTSLLALLAMRAVVGLAEGVALPAM 210 (526)
Q Consensus 135 ~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~-~~~~~~~~---~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~ 210 (526)
.+|-+.....+.+++.++=.=-++|-..+--+++..-. .+.+.+.. -.+. .||+.-..+---+|.|.|. .|..
T Consensus 280 ~ig~vsL~lflamALmSlkLweL~~l~lpl~viL~vQ~i~m~lfa~fvtfr~mG--~~YdAaV~~~G~~G~gLGA-TPtA 356 (404)
T COG0786 280 VIGNVSLSLFLAMALMSLKLWELADLALPLLVILAVQTIVMALFAIFVTFRLMG--KNYDAAVLAAGHCGFGLGA-TPTA 356 (404)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhC--cchhHHHHhcccccCccCC-cHHH
Confidence 45566666677777777766667776666554433222 22221111 1222 6777766666666777665 4444
Q ss_pred HHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Q 009757 211 NNMVARWFPQTERARAVAIAMGGFTSGNAIGLVLSPILMSQAG 253 (526)
Q Consensus 211 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~~g 253 (526)
.+-+.... +|.|. .--..++-|++++++.+..+
T Consensus 357 ianM~av~-~k~g~---------S~kAf~ivPiVGAffid~in 389 (404)
T COG0786 357 IANMQAVT-EKFGP---------SHKAFIVVPIVGAFFIDIIN 389 (404)
T ss_pred HHhhhcch-hhcCC---------CceeeEEeehHHHHHHHHHH
Confidence 44344333 23333 22345667777777766444
No 370
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=23.07 E-value=6.8e+02 Score=24.07 Aligned_cols=60 Identities=8% Similarity=0.055 Sum_probs=31.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHhh
Q 009757 324 MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQR 390 (526)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~~ 390 (526)
++++.+.....+.+.++.+....-. .... ++.....+ ...+.-+...++.+.+++++|.|
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~-~vn~--~lg~~sl~----~~y~~l~~s~m~~~~~Ir~~g~K 88 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQT-SVNY--DLGTVSLG----ALYLSLIDSSMFMPLLIRFLGTK 88 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH-HHhc--Ccccchhh----hhhHHHHHHHHHHHHHHHHHhhH
Confidence 3456666666665555555443322 1111 22222222 22344556667777999999988
No 371
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=23.05 E-value=5e+02 Score=22.53 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=24.4
Q ss_pred cchhhHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 009757 220 QTERARAVAIAMGGFTSGNAIGLVLSPILMS 250 (526)
Q Consensus 220 ~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~ 250 (526)
.++.+++.++.-.+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4667888888888888888888888877644
No 372
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=22.52 E-value=7.5e+02 Score=24.36 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=26.4
Q ss_pred HHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHHH
Q 009757 197 AVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLVL 244 (526)
Q Consensus 197 ~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l 244 (526)
++.|+..|.........+.+...-++--.+.++...+.-+|.+..++.
T Consensus 278 ~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf 325 (399)
T PF00909_consen 278 LLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLF 325 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHH
T ss_pred HHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHH
Confidence 344555454444444455566555555567777766666665555444
No 373
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=22.48 E-value=5.8e+02 Score=23.17 Aligned_cols=53 Identities=15% Similarity=0.217 Sum_probs=28.7
Q ss_pred cchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhHHHHHHHhhhhhHHHHHHH
Q 009757 187 TSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERARAVAIAMGGFTSGNAIGLV 243 (526)
Q Consensus 187 ~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~ 243 (526)
.|..-++.+....|+-... ....-.+.+..| +|.....+...++++|..+-..
T Consensus 32 ~s~~FyY~sg~~lGv~~s~--li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l~~ 84 (249)
T PF10225_consen 32 RSVLFYYSSGISLGVLASL--LILLFQLSKLLP--RKSMFYAVLYGGWSFGLYFLQQ 84 (249)
T ss_pred cChhHHHhhhHHHHHHHHH--HHHHHHHHHHcc--CcchhHHHHhhhhHHHHHHHHH
Confidence 6666677776666665332 233445678887 4444444444444555444333
No 374
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=22.21 E-value=3.2e+02 Score=22.12 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=18.9
Q ss_pred HHhhhcCcchhhHHHHHHHhhhhhH
Q 009757 213 MVARWFPQTERARAVAIAMGGFTSG 237 (526)
Q Consensus 213 ~i~~~~~~~~r~~~~~~~~~~~~~G 237 (526)
-+.|++|+..|....+.+.......
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHH
Confidence 4689999999998888776555443
No 375
>COG2095 MarC Multiple antibiotic transporter [Intracellular trafficking and secretion]
Probab=22.18 E-value=3.7e+02 Score=23.52 Aligned_cols=68 Identities=6% Similarity=0.064 Sum_probs=38.3
Q ss_pred hhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Q 009757 441 SGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALFYIIF 508 (526)
Q Consensus 441 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
+...+......+++|-+..=-......+...+.-..+.++.+.+|--...|-+.+.+.+.-..+-...
T Consensus 25 pvf~slt~~~~~~~r~~v~~ra~i~a~~ill~f~~~G~~il~~fgIsi~a~rIAGGilLf~ia~~ml~ 92 (203)
T COG2095 25 PVFISLTKGLSPEERNRVALRASIIALLILLVFLLLGEGILRFFGISIDAFRIAGGILLFLIALRMLF 92 (203)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHhhhHHHHHHHHHHhc
Confidence 34455566666666665554444555555555556666677766644556666666555444333333
No 376
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=22.10 E-value=2.5e+02 Score=18.66 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q 009757 235 TSGNAIGLVLSPILMSQAGIFGPFVIFGLSGFLWVLVWL 273 (526)
Q Consensus 235 ~~G~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 273 (526)
-+|.++|.+.+......+++.....+..+.+++..++..
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 355555655555544456666666666665555554444
No 377
>PRK11111 hypothetical protein; Provisional
Probab=21.93 E-value=5.6e+02 Score=22.65 Aligned_cols=64 Identities=8% Similarity=0.063 Sum_probs=30.9
Q ss_pred hhHHHHHHhhcccchhhHHHHHHHHHhHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHH
Q 009757 441 SGFLVNLQEIAPQYSGVLHGISNTAGTFAAILGTVGAGFFVELVGSFQGFLLLTSLLYFLSALF 504 (526)
Q Consensus 441 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 504 (526)
+....+..+..+++|-+..--..........+....+.++.+.+|--...|-+.+.+.+....+
T Consensus 28 piflslt~~~s~~~r~~ia~~a~l~a~~ill~f~~~G~~iL~~fGIsl~afrIaGGiiL~~ial 91 (214)
T PRK11111 28 PVFISMTSHQTAAERNKTNLTANLSVAIILLISLFLGDFILNLFGISIDSFRIAGGILVVTIAM 91 (214)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3444555555554333322222222233333445556666677774455666666655544333
No 378
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=21.82 E-value=3.7e+02 Score=23.99 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHH
Q 009757 371 SVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMK 436 (526)
Q Consensus 371 ~~~~i~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (526)
+++.+|..+..++.||+.+. .....++....++.-.....++....+..+.++...+
T Consensus 13 ~G~~iG~~~~~~i~~~~~~~---------l~~~~Gl~~l~iGi~~~~~~~~~~~vi~slvlG~iiG 69 (226)
T PF04474_consen 13 LGGLIGLLLGRRIPERIKDT---------LMQALGLCVLAIGISMALKGQNPLLVILSLVLGTIIG 69 (226)
T ss_pred HHHHHHHHHcCCCCHHHHHH---------HHHHhhHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 34445555555555555544 5556666666666555555556666666665555443
No 379
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.80 E-value=1e+02 Score=31.18 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=21.4
Q ss_pred CCcchhhhHhhHhHHHHHHHHHHHHHHHHHHHh
Q 009757 357 IDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQ 389 (526)
Q Consensus 357 ~s~~~~~~~~~~~~~~~~i~~~~~g~l~dr~~~ 389 (526)
+++..=|-+++...+.-++..+++|+.+.|+-+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rlyk 388 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARLYK 388 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhhHh
Confidence 466666666666666666666777777766543
No 380
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=21.69 E-value=6.4e+02 Score=24.42 Aligned_cols=25 Identities=12% Similarity=0.286 Sum_probs=18.5
Q ss_pred hhhcchhhhhhhcCCccchhhHHHH
Q 009757 117 VMSVAIVPLSLAHGWSRSFSGIVQS 141 (526)
Q Consensus 117 ~~~~~~~~l~~~~~~s~~~~g~~~s 141 (526)
.....+....+++|.++...|.+..
T Consensus 239 ~lv~~le~~l~~~g~~~~F~G~iIa 263 (368)
T COG0387 239 ILVGSLEAVLESLGAPPAFVGLIIA 263 (368)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 4455667788899999988776654
No 381
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.53 E-value=5e+02 Score=21.94 Aligned_cols=63 Identities=11% Similarity=-0.022 Sum_probs=32.7
Q ss_pred hHHHhHhcChH-HHHHHHHHHHHHHhhhhhccccchHHHHHHHHHhhhhccchhhhhHHHHhhhcCcchhhH
Q 009757 155 GTLVDYYGGKI-IMAWGVALWSLATFLTPWAADTSLLALLAMRAVVGLAEGVALPAMNNMVARWFPQTERAR 225 (526)
Q Consensus 155 G~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r~~ 225 (526)
..+..-+.++| ..-+..+...+.++..++.. +|...-+++-+++.++. .-|.-.++|-.++|.
T Consensus 100 ~ql~~m~~p~Rl~~T~~~l~~~~~Tly~al~~-ks~iLtllf~ilq~lal-------iwYslSyiP~g~~gv 163 (175)
T KOG2887|consen 100 SQLKHMFSPERLPATLSYLATMVLTLYVALWL-KSKILTLLFCILQVLAL-------IWYSLSYIPFGRSGV 163 (175)
T ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-------HHHHHHhCcchhhHH
Confidence 34444555554 34444444455555444432 56666666667776542 234445666655553
No 382
>COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms]
Probab=21.48 E-value=8.4e+02 Score=24.52 Aligned_cols=21 Identities=5% Similarity=-0.230 Sum_probs=10.5
Q ss_pred HHHHHHhhhhhhHHHhHhcCh
Q 009757 144 LWGYLVSPIAGGTLVDYYGGK 164 (526)
Q Consensus 144 ~~~~~~~~~~~G~l~dr~Grr 164 (526)
.+...++.-.....+.++|+|
T Consensus 67 ~~~~gl~~g~~~liaq~~Ga~ 87 (455)
T COG0534 67 AIFIGLGTGTTVLVAQAIGAG 87 (455)
T ss_pred HHHHHHHHhHHHHHHHHHcCC
Confidence 333344444445566666653
No 383
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=21.25 E-value=49 Score=26.47 Aligned_cols=13 Identities=8% Similarity=-0.097 Sum_probs=5.7
Q ss_pred hhHHHHHHHHHHH
Q 009757 255 FGPFVIFGLSGFL 267 (526)
Q Consensus 255 ~~~f~~~~~~~~~ 267 (526)
||++++..++.++
T Consensus 1 RW~l~~iii~~i~ 13 (130)
T PF12273_consen 1 RWVLFAIIIVAIL 13 (130)
T ss_pred CeeeHHHHHHHHH
Confidence 4555444444333
No 384
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=21.19 E-value=6.1e+02 Score=24.29 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=16.0
Q ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHH
Q 009757 475 VGAGFFVELVGSFQGFLLLTSLLYFLSALFYII 507 (526)
Q Consensus 475 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 507 (526)
.+.+....+.. ..+.++++.++.+++.+++..
T Consensus 274 li~~i~~f~~~-~~~ly~~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 274 LIIDIFFFGYK-FSWLYILAFALIIIGFVVYNL 305 (334)
T ss_pred HHHHHHhcCcc-ccHHHHHHHHHHHHHhheEEc
Confidence 34444443332 455566655555555555443
No 385
>COG4721 ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]
Probab=21.02 E-value=5e+02 Score=21.75 Aligned_cols=99 Identities=12% Similarity=0.113 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhcchhhhhhhcCCccchhhHHHHHHHHHHHHhhhhhhHHHhHhcChHHHHHHHHHHHHHHh
Q 009757 100 VVSMLALALALCNADRVVMSVAIVPLSLAHGWSRSFSGIVQSSFLWGYLVSPIAGGTLVDYYGGKIIMAWGVALWSLATF 179 (526)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 179 (526)
+...+.......+...+.++..+.....-+++.+..-+.+..+..++..++.++ ..|-| .-+++-++.++...
T Consensus 12 i~svlsi~fgvvfl~w~~~~~v~at~lhp~ale~~~~~i~~GiW~maavi~~l~----IpkpG---aAl~~Ev~Aa~ve~ 84 (192)
T COG4721 12 ILSVLSIVFGVVFLGWGYVGNVLATLLHPLALEPFANEILFGIWFMAAVIAALF----IPKPG---AALIGEVLAALVEV 84 (192)
T ss_pred HHHHHHHHHHhheeehhhhhHHHHHhcchhhcCccccchHHHHHHHHHHHeeee----ecCCc---HHHHHHHHHHHHHH
Confidence 333333333333344444444444444444466655566666666655544433 22222 33444455544444
Q ss_pred hhhhccccchHHHHHHHHHhhhhccchhh
Q 009757 180 LTPWAADTSLLALLAMRAVVGLAEGVALP 208 (526)
Q Consensus 180 ~~~~~~~~~~~~l~~~r~l~Gig~g~~~~ 208 (526)
+.+- +.=..-++..++||+|.-..+.
T Consensus 85 ll~s---qfgi~tivsgfvQGlgaE~vFa 110 (192)
T COG4721 85 LLGS---QFGIGTIVSGFVQGLGAEFVFA 110 (192)
T ss_pred HHcC---CCCchHHHHHHHHhhhhhHHHH
Confidence 3321 2223456667899998665443
No 386
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=20.31 E-value=8.4e+02 Score=24.05 Aligned_cols=26 Identities=8% Similarity=0.061 Sum_probs=19.7
Q ss_pred cchhhHHHHHHHhhhhhHHHHHHHHH
Q 009757 220 QTERARAVAIAMGGFTSGNAIGLVLS 245 (526)
Q Consensus 220 ~~~r~~~~~~~~~~~~~G~~ig~~l~ 245 (526)
+++.+....+.++..+.|.+.-|..+
T Consensus 3 ~~d~~w~~~l~gt~IGaGiL~LP~~a 28 (397)
T TIGR00814 3 KTDTGWMLGLYGTAIGAGVLFLPIQA 28 (397)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 56677788888888888887777753
No 387
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=20.21 E-value=4.3e+02 Score=26.66 Aligned_cols=12 Identities=17% Similarity=0.221 Sum_probs=10.1
Q ss_pred cchHHHHHHHHH
Q 009757 187 TSLLALLAMRAV 198 (526)
Q Consensus 187 ~~~~~l~~~r~l 198 (526)
-+||.+++.|++
T Consensus 179 ~syWLFY~vrIl 190 (505)
T PF06638_consen 179 FSYWLFYGVRIL 190 (505)
T ss_pred HHHHHHhhheee
Confidence 568999999887
No 388
>KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms]
Probab=20.20 E-value=4.5e+02 Score=27.68 Aligned_cols=14 Identities=7% Similarity=0.050 Sum_probs=7.5
Q ss_pred HHHHHHhhhhccch
Q 009757 193 LAMRAVVGLAEGVA 206 (526)
Q Consensus 193 ~~~r~l~Gig~g~~ 206 (526)
.+.-=+.|.|.++.
T Consensus 187 ~lttQ~lGyGwAGl 200 (761)
T KOG2262|consen 187 VLTTQLLGYGWAGL 200 (761)
T ss_pred HHHHHHhcccHhhh
Confidence 33444666766543
No 389
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=20.15 E-value=3.7e+02 Score=19.85 Aligned_cols=52 Identities=12% Similarity=0.230 Sum_probs=30.8
Q ss_pred hHHHHHcC--chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcchhhhHhh
Q 009757 316 PFRRLLSK--MPTWSIIVANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSA 367 (526)
Q Consensus 316 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 367 (526)
.++++.+. +..+.+.+..+..++++.....+.|..+.....-+....|+...
T Consensus 6 ~f~~L~r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g 59 (91)
T PF04341_consen 6 EFQELVRRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLG 59 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHH
Confidence 34444443 33555666777777788888888888877643322344444433
Done!