Citrus Sinensis ID: 009760

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520------
MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPGIISLSPSLLNPFTFHISILVCKYSPQLY
ccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcHHHHcccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccHHHcccHHHHHHHHHHHcccccccccccccccccccccccccEEEEEcccccccccc
cHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcEcEcccccccccccccEccccEcccccEccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHHccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccEccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccccccEccccccHHHHcccccccccccccEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEEEcccccc
MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEaqrsgylphnqrvtwransglndgkasgvdlvggyydagdnvkfglPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTdyfikahpqpnvlygevgdgntdhncwqrpedmttdrraykidpsnpgsdlaGETAAAMAAASIVfrhsdpayssELLRHAYQLFdfadkyrgkydgSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYlgkngdsmggtgwgmtefgwdvkypgVQTLVAKFLMqgkaghyapvFERYQQKAEYFMCsclgkgsrnvqktpgglifRQRWNNMQFVTSASFLATVYSDYLASAGrdlkcsagnvapaELLGFAKSQVDyilgdnpratsymvgygnnypqrvhHRASSIVsikvnpsfvscrggyatwfsskgsdpnllvgavvggpdaydnfgdrrdnyeqtepatynnapILGILARLnaghggynqllpgiislspsllnpftFHISILVCKYSPQLY
MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPGIISLSPSLLNPFTFHISILVCKYSPQLY
MEKFMTplllllclplalaGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETaaamaaaSIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQllpgiislspsllNPFTFHISILVCKYSPQLY
***FMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCW*******************************MAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPGIISLSPSLLNPFTFHISILVCKY*****
**KFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG*N**************NPFTFH*************
MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPGIISLSPSLLNPFTFHISILVCKYSPQLY
MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPGIISLSPSLLNPFTFHISILVCKYSPQL*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPGIISLSPSLLNPFTFHISILVCKYSPQLY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query526 2.2.26 [Sep-21-2011]
Q42059620 Endoglucanase 6 OS=Arabid yes no 0.948 0.804 0.824 0.0
Q8L7I0626 Endoglucanase 19 OS=Arabi no no 0.937 0.787 0.797 0.0
Q5NAT0640 Endoglucanase 2 OS=Oryza yes no 0.889 0.731 0.721 0.0
Q6L4I2629 Endoglucanase 15 OS=Oryza no no 0.910 0.761 0.7 0.0
Q5NAT8640 Endoglucanase 1 OS=Oryza no no 0.876 0.720 0.706 0.0
O48766525 Endoglucanase 11 OS=Arabi no no 0.906 0.908 0.606 1e-177
Q6Z5P2531 Endoglucanase 7 OS=Oryza no no 0.885 0.877 0.613 1e-168
Q654U4538 Endoglucanase 16 OS=Oryza no no 0.885 0.866 0.598 1e-162
Q84Q51529 Endoglucanase 21 OS=Oryza no no 0.885 0.880 0.596 1e-160
Q6H3Z9556 Endoglucanase 22 OS=Oryza no no 0.884 0.836 0.592 1e-159
>sp|Q42059|GUN6_ARATH Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2 Back     alignment and function desciption
 Score =  865 bits (2235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/502 (82%), Positives = 460/502 (91%), Gaps = 3/502 (0%)

Query: 1   MEKFM---TPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLN 57
           MEKF      LLLLLC P+A +GHDYGQALSKS+LFFEAQRSG LP NQRVTWR++SGL 
Sbjct: 1   MEKFAPVAALLLLLLCFPVAFSGHDYGQALSKSLLFFEAQRSGVLPRNQRVTWRSHSGLT 60

Query: 58  DGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWG 117
           DGK+SGV+LVGGYYDAGDNVKFGLPMAFTVTMM+WS+IEYG Q+ A+GELG++++AIKWG
Sbjct: 61  DGKSSGVNLVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGNQLQANGELGNSIDAIKWG 120

Query: 118 TDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAM 177
           TDYFIKAHP+PNVLYGEVGDGNTDH CWQRPE+MTTDR+AY+IDPSNPGSDLAGETAAAM
Sbjct: 121 TDYFIKAHPEPNVLYGEVGDGNTDHYCWQRPEEMTTDRKAYRIDPSNPGSDLAGETAAAM 180

Query: 178 AAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWA 237
           AAASIVFR S+P YS  LL HAYQLFDFADKYRGKYD SITVAQKYYRS+SGYNDELLWA
Sbjct: 181 AAASIVFRRSNPVYSRLLLTHAYQLFDFADKYRGKYDSSITVAQKYYRSVSGYNDELLWA 240

Query: 238 AAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYA 297
           AAWLYQAS NQ YLDYLG+NGD+MGGTGW MTEFGWDVKY GVQTLVAKFLMQGKAG +A
Sbjct: 241 AAWLYQASNNQFYLDYLGRNGDAMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGRHA 300

Query: 298 PVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLAS 357
           PVF +YQ+KA+ FMCS LGK SRN+QKTPGGLIFRQRWNNMQFVTSASFL TVYSDYL S
Sbjct: 301 PVFRKYQEKADSFMCSLLGKSSRNIQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLTS 360

Query: 358 AGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSI 417
           +  +L+C+AGNVAP++LL FAKSQVDYILGDNPRATSYMVGYGNN+PQRVHHR SSIVS+
Sbjct: 361 SRSNLRCAAGNVAPSQLLSFAKSQVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSV 420

Query: 418 KVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAP 477
           KV+ +FV+CRGGYATWFS KGSDPNLL GA+VGGPDAYDNF DRRDNYEQTEPATYNNAP
Sbjct: 421 KVDRTFVTCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADRRDNYEQTEPATYNNAP 480

Query: 478 ILGILARLNAGHGGYNQLLPGI 499
           +LG+LARL++GH GY+Q LP +
Sbjct: 481 LLGVLARLSSGHSGYSQFLPVV 502

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1 Back     alignment and function description
>sp|Q5NAT0|GUN2_ORYSJ Endoglucanase 2 OS=Oryza sativa subsp. japonica GN=GLU5 PE=1 SV=1 Back     alignment and function description
>sp|Q6L4I2|GUN15_ORYSJ Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1 Back     alignment and function description
>sp|Q5NAT8|GUN1_ORYSJ Endoglucanase 1 OS=Oryza sativa subsp. japonica GN=GLU7 PE=2 SV=1 Back     alignment and function description
>sp|O48766|GUN11_ARATH Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1 Back     alignment and function description
>sp|Q6Z5P2|GUN7_ORYSJ Endoglucanase 7 OS=Oryza sativa subsp. japonica GN=GLU10 PE=2 SV=1 Back     alignment and function description
>sp|Q654U4|GUN16_ORYSJ Endoglucanase 16 OS=Oryza sativa subsp. japonica GN=Os06g0247900 PE=2 SV=2 Back     alignment and function description
>sp|Q84Q51|GUN21_ORYSJ Endoglucanase 21 OS=Oryza sativa subsp. japonica GN=GLU9 PE=2 SV=1 Back     alignment and function description
>sp|Q6H3Z9|GUN22_ORYSJ Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query526
254031737546 endo-1,4-beta-glucanase [Dimocarpus long 0.944 0.910 0.909 0.0
224058299622 predicted protein [Populus trichocarpa] 0.950 0.803 0.875 0.0
356513287624 PREDICTED: endoglucanase 6 [Glycine max] 0.942 0.794 0.897 0.0
429326602622 korrigan [Populus tomentosa] 0.950 0.803 0.861 0.0
356523525625 PREDICTED: endoglucanase 6-like [Glycine 0.944 0.795 0.879 0.0
90017355620 endo-beta-1,4-glucanase [Prunus persica] 0.923 0.783 0.889 0.0
90017357620 endo-beta-1,4-glucanase [Prunus persica] 0.923 0.783 0.889 0.0
86285595602 endo-1,4-beta-glucanase, partial [Glycin 0.906 0.792 0.905 0.0
224072192622 glycosyl hydrolase family 9 [Populus tri 0.916 0.774 0.881 0.0
148763627619 endo-beta-1,4-glucanase [Mangifera indic 0.923 0.785 0.870 0.0
>gi|254031737|gb|ACT54546.1| endo-1,4-beta-glucanase [Dimocarpus longan] Back     alignment and taxonomy information
 Score =  934 bits (2415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/497 (90%), Positives = 475/497 (95%)

Query: 1   MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGK 60
           MEK +  LLL +CLP  LAGHDYGQAL+KSILFFEAQRSGYLPHNQRVTWRANSGLNDGK
Sbjct: 1   MEKLLLLLLLCICLPHTLAGHDYGQALTKSILFFEAQRSGYLPHNQRVTWRANSGLNDGK 60

Query: 61  ASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDY 120
           ASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAA+GELGHAM+A+KWGTDY
Sbjct: 61  ASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAANGELGHAMDAVKWGTDY 120

Query: 121 FIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAA 180
           FIKAHPQPNVLYGEVGDGNTDH CWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAA
Sbjct: 121 FIKAHPQPNVLYGEVGDGNTDHYCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAA 180

Query: 181 SIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAW 240
           SIVFRHS+PAYSSELLRHAYQLFDFADKYRGKYD SI+VAQKYYRS+SGYNDELLWAAAW
Sbjct: 181 SIVFRHSNPAYSSELLRHAYQLFDFADKYRGKYDSSISVAQKYYRSVSGYNDELLWAAAW 240

Query: 241 LYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVF 300
           LYQASGN +YLDYLG+NGDSMGGTGWGMTEFGWDVKY GVQTLVAKFLMQGKAG YAPVF
Sbjct: 241 LYQASGNHYYLDYLGRNGDSMGGTGWGMTEFGWDVKYAGVQTLVAKFLMQGKAGPYAPVF 300

Query: 301 ERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGR 360
           ER+QQKAEYFMCSCLGKGSRN+QKTPGGLIFRQRWNNMQFVTSASFLATVYSDY+AS+ +
Sbjct: 301 ERFQQKAEYFMCSCLGKGSRNIQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYIASSAK 360

Query: 361 DLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVN 420
            LKCS+GNV  AELL FAKSQVDYILGDNPRATSYMVGYGNNYP++VHHRASSIVS KVN
Sbjct: 361 SLKCSSGNVPAAELLSFAKSQVDYILGDNPRATSYMVGYGNNYPRQVHHRASSIVSFKVN 420

Query: 421 PSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILG 480
           PSFV+CRGGYATWFS KGSDPNLL GA+VGGPDAYDNF D RDNYEQTEPATYNNAP+LG
Sbjct: 421 PSFVTCRGGYATWFSRKGSDPNLLDGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLG 480

Query: 481 ILARLNAGHGGYNQLLP 497
           ILARL+ GHGGYNQLLP
Sbjct: 481 ILARLHGGHGGYNQLLP 497

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224058299|ref|XP_002299478.1| predicted protein [Populus trichocarpa] gi|222846736|gb|EEE84283.1| predicted protein [Populus trichocarpa] gi|347466587|gb|AEO97206.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466641|gb|AEO97233.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356513287|ref|XP_003525345.1| PREDICTED: endoglucanase 6 [Glycine max] Back     alignment and taxonomy information
>gi|429326602|gb|AFZ78641.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|356523525|ref|XP_003530388.1| PREDICTED: endoglucanase 6-like [Glycine max] Back     alignment and taxonomy information
>gi|90017355|emb|CAI68019.1| endo-beta-1,4-glucanase [Prunus persica] Back     alignment and taxonomy information
>gi|90017357|emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica] Back     alignment and taxonomy information
>gi|86285595|gb|ABC94542.1| endo-1,4-beta-glucanase, partial [Glycine max] Back     alignment and taxonomy information
>gi|224072192|ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|222841077|gb|EEE78624.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|347466589|gb|AEO97207.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466643|gb|AEO97234.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|148763627|gb|ABR10607.1| endo-beta-1,4-glucanase [Mangifera indica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query526
TAIR|locus:2014205620 GH9C2 "glycosyl hydrolase 9C2" 0.903 0.766 0.827 4.9e-227
TAIR|locus:2136073626 GH9C3 "glycosyl hydrolase 9C3" 0.903 0.758 0.797 1.7e-217
TAIR|locus:2059375525 GH9B8 "glycosyl hydrolase 9B8" 0.885 0.887 0.608 2.7e-164
TAIR|locus:2028441627 GH9C1 "glycosyl hydrolase 9C1" 0.895 0.751 0.565 1.4e-149
TAIR|locus:2042441490 GH9B10 "glycosyl hydrolase 9B1 0.865 0.928 0.543 2.2e-137
TAIR|locus:2042376491 GH9B9 "glycosyl hydrolase 9B9" 0.866 0.928 0.534 1.5e-136
TAIR|locus:2042461492 GH9B12 "glycosyl hydrolase 9B1 0.870 0.930 0.533 3.2e-136
TAIR|locus:2042451491 GH9B11 "glycosyl hydrolase 9B1 0.866 0.928 0.538 4.7e-135
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.865 0.908 0.526 1.2e-127
TAIR|locus:2033600492 GH9B1 "glycosyl hydrolase 9B1" 0.874 0.934 0.514 7.8e-126
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2191 (776.3 bits), Expect = 4.9e-227, P = 4.9e-227
 Identities = 393/475 (82%), Positives = 436/475 (91%)

Query:    20 GHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKF 79
             GHDYGQALSKS+LFFEAQRSG LP NQRVTWR++SGL DGK+SGV+LVGGYYDAGDNVKF
Sbjct:    23 GHDYGQALSKSLLFFEAQRSGVLPRNQRVTWRSHSGLTDGKSSGVNLVGGYYDAGDNVKF 82

Query:    80 GLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGN 139
             GLPMAFTVTMM+WS+IEYG Q+ A+GELG++++AIKWGTDYFIKAHP+PNVLYGEVGDGN
Sbjct:    83 GLPMAFTVTMMAWSVIEYGNQLQANGELGNSIDAIKWGTDYFIKAHPEPNVLYGEVGDGN 142

Query:   140 TDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETXXXXXXXSIVFRHSDPAYSSELLRHA 199
             TDH CWQRPE+MTTDR+AY+IDPSNPGSDLAGET       SIVFR S+P YS  LL HA
Sbjct:   143 TDHYCWQRPEEMTTDRKAYRIDPSNPGSDLAGETAAAMAAASIVFRRSNPVYSRLLLTHA 202

Query:   200 YQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGD 259
             YQLFDFADKYRGKYD SITVAQKYYRS+SGYNDELLWAAAWLYQAS NQ YLDYLG+NGD
Sbjct:   203 YQLFDFADKYRGKYDSSITVAQKYYRSVSGYNDELLWAAAWLYQASNNQFYLDYLGRNGD 262

Query:   260 SMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGS 319
             +MGGTGW MTEFGWDVKY GVQTLVAKFLMQGKAG +APVF +YQ+KA+ FMCS LGK S
Sbjct:   263 AMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGRHAPVFRKYQEKADSFMCSLLGKSS 322

Query:   320 RNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAK 379
             RN+QKTPGGLIFRQRWNNMQFVTSASFL TVYSDYL S+  +L+C+AGNVAP++LL FAK
Sbjct:   323 RNIQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLTSSRSNLRCAAGNVAPSQLLSFAK 382

Query:   380 SQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGS 439
             SQVDYILGDNPRATSYMVGYGNN+PQRVHHR SSIVS+KV+ +FV+CRGGYATWFS KGS
Sbjct:   383 SQVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSVKVDRTFVTCRGGYATWFSRKGS 442

Query:   440 DPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQ 494
             DPNLL GA+VGGPDAYDNF DRRDNYEQTEPATYNNAP+LG+LARL++GH GY+Q
Sbjct:   443 DPNLLTGAIVGGPDAYDNFADRRDNYEQTEPATYNNAPLLGVLARLSSGHSGYSQ 497
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059375 GH9B8 "glycosyl hydrolase 9B8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028441 GH9C1 "glycosyl hydrolase 9C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042441 GH9B10 "glycosyl hydrolase 9B10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042376 GH9B9 "glycosyl hydrolase 9B9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042461 GH9B12 "glycosyl hydrolase 9B12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042451 GH9B11 "glycosyl hydrolase 9B11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033600 GH9B1 "glycosyl hydrolase 9B1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q42059GUN6_ARATH3, ., 2, ., 1, ., 40.82470.94860.8048yesno
Q5NAT0GUN2_ORYSJ3, ., 2, ., 1, ., 40.72150.88970.7312yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.991
3rd Layer3.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query526
PLN02171629 PLN02171, PLN02171, endoglucanase 0.0
PLN02420525 PLN02420, PLN02420, endoglucanase 0.0
PLN02340614 PLN02340, PLN02340, endoglucanase 0.0
PLN00119489 PLN00119, PLN00119, endoglucanase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 0.0
PLN02308492 PLN02308, PLN02308, endoglucanase 0.0
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
PLN02613498 PLN02613, PLN02613, endoglucanase 0.0
PLN02345469 PLN02345, PLN02345, endoglucanase 0.0
PLN03009495 PLN03009, PLN03009, cellulase 1e-179
PLN02909486 PLN02909, PLN02909, Endoglucanase 1e-175
PLN02175484 PLN02175, PLN02175, endoglucanase 1e-151
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information 
 Score = 1031 bits (2667), Expect = 0.0
 Identities = 429/517 (82%), Positives = 464/517 (89%), Gaps = 8/517 (1%)

Query: 1   MEKFMT-----PLLLL---LCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRA 52
           MEKF        LLL    LC P+A  GHDYGQALSKSILFFEAQRSG LP NQRVTWRA
Sbjct: 1   MEKFARVILLALLLLAAAQLCFPVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRA 60

Query: 53  NSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMN 112
           NSGL DGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAA+GELGHAM+
Sbjct: 61  NSGLFDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAAAGELGHAMD 120

Query: 113 AIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGE 172
           A+KWGTDYFIKAHP+PNVLYGEVGDG+TDH CWQRPEDMTTDR+AY+IDP NPGSDLAGE
Sbjct: 121 AVKWGTDYFIKAHPEPNVLYGEVGDGDTDHYCWQRPEDMTTDRQAYRIDPQNPGSDLAGE 180

Query: 173 TAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYND 232
           TAAAMAAASIVFR S+P Y++ELL HA QLFDFADKYRGKYD SITVAQKYYRS+SGY D
Sbjct: 181 TAAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITVAQKYYRSVSGYGD 240

Query: 233 ELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGK 292
           ELLWAAAWLYQA+ NQ+YLDYLG NGD++GGTGW MTEFGWDVKY GVQ LVAKFLMQGK
Sbjct: 241 ELLWAAAWLYQATNNQYYLDYLGNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGK 300

Query: 293 AGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYS 352
           AG +A VF+RYQQKAE+FMCSCLGKG+RNVQKTPGGLI+RQRWNNMQFVTSASFL TVYS
Sbjct: 301 AGEHAAVFQRYQQKAEFFMCSCLGKGARNVQKTPGGLIYRQRWNNMQFVTSASFLLTVYS 360

Query: 353 DYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRAS 412
           DYLAS+GR L+C+AGN AP++LL FAKSQVDYILGDNPRATSYMVGYG NYP++VHHR S
Sbjct: 361 DYLASSGRALRCAAGNAAPSQLLAFAKSQVDYILGDNPRATSYMVGYGANYPRQVHHRGS 420

Query: 413 SIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPAT 472
           SIVSIKV+PSFVSCRGGYATWFS KGSDPNLL GA+VGGPDAYDNF D RDNYEQTEPAT
Sbjct: 421 SIVSIKVDPSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPAT 480

Query: 473 YNNAPILGILARLNAGHGGYNQLLPGIISLSPSLLNP 509
           YNNAP+LG+LARL  GHGGYNQLL  + + S   +N 
Sbjct: 481 YNNAPLLGVLARLAGGHGGYNQLLVVVPAPSEVAINR 517

Length = 629
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 526
PLN02171629 endoglucanase 100.0
PLN02340614 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02266510 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PLN03009495 cellulase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.1
KOG2787403 consensus Lanthionine synthetase C-like protein 1 94.61
COG1331667 Highly conserved protein containing a thioredoxin 94.53
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 94.18
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 93.86
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 92.55
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 86.97
cd02892634 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; 81.43
TIGR03463634 osq_cycl 2,3-oxidosqualene cyclase. This model ide 80.43
>PLN02171 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=3.4e-127  Score=1045.20  Aligned_cols=481  Identities=87%  Similarity=1.430  Sum_probs=454.5

Q ss_pred             hcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCccccCCCCCCCCCCCccccccceecCCCCcccccChhHHHHHHHHHH
Q 009760           15 PLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSI   94 (526)
Q Consensus        15 ~~~~~~~~Y~~~l~~sl~ff~~QRsG~~p~~~~~~w~~~~~~~D~~~~~~dlsGGW~DAGD~~Ky~~~~a~s~~~L~~~~   94 (526)
                      +.+.+.++|.++|++||+||++||||++|+++++.||+++++.|+++.++||+|||||||||+||++|+|+++++|+|++
T Consensus        23 ~~~~~~~~Y~~al~~sl~Fy~~QRsG~lp~~~~~~Wr~~s~~~Dg~~~~vDlsGGwyDAGD~vKf~~p~a~s~t~L~w~~  102 (629)
T PLN02171         23 PVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRANSGLFDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSI  102 (629)
T ss_pred             ccccCchhHHHHHHHHHHHHHHccCCCCCcccCCCCccCCCCCCCCcCcccCCCCceeCCCCceeccchHHHHHHHHHHH
Confidence            55778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHhcCChHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChhHHHHHH
Q 009760           95 IEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETA  174 (526)
Q Consensus        95 ~e~~~~~~~~~~~~dlLde~kwg~d~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~~~~~A  174 (526)
                      +||++.+++.++++++|||+|||+|||||||++++++|+|||++..||.+|++||+|+++|++|.+++++|+|++++++|
T Consensus       103 ~e~~~~~~~~g~~~~~Ldeikw~~Dyllk~~~~~~~~y~qVgdg~~DH~~W~~Pe~~~~~R~~y~i~~~~pgSd~a~e~A  182 (629)
T PLN02171        103 IEYGKQMAAAGELGHAMDAVKWGTDYFIKAHPEPNVLYGEVGDGDTDHYCWQRPEDMTTDRQAYRIDPQNPGSDLAGETA  182 (629)
T ss_pred             HHhHHHHhhcCCcHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCccccCcCChhHccccceeEEecCCCCchHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998999999999999


Q ss_pred             HHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccCcccCCCCchhHHHHHHHHHHHHhCChhHHHHH
Q 009760          175 AAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYL  254 (526)
Q Consensus       175 AalA~Aa~v~k~~D~~~A~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAA~eLy~aTg~~~Y~~~~  254 (526)
                      ||||+||||||++||+||++||++||++|+||+++|+.|+++.+..++||+|.++|.||++|||+|||++|||++|++++
T Consensus       183 AAlAaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~~~~~Y~s~s~y~DEl~WAAawLy~ATgd~~Yl~~~  262 (629)
T PLN02171        183 AAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITVAQKYYRSVSGYGDELLWAAAWLYQATNNQYYLDYL  262 (629)
T ss_pred             HHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcccCCccCCCCCccHHHHHHHHHHHHHhCCHHHHHHH
Confidence            99999999999999999999999999999999999999988877788999976789999999999999999999999999


Q ss_pred             hhcccCCCCCCCCccccCCCCcchHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHhhcCCCCccccCCCCceeccc
Q 009760          255 GKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQR  334 (526)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~t~~G~~~~~~  334 (526)
                      +++.+.++...|...+|+||++++|+++|++++++.++.+.+...++.|++.+|.|+|.+++++..++.+||+|++|...
T Consensus       263 ~~~~~~~~~~~~~~~~f~WD~k~~G~~~L~a~~~~~~~~~~~~~~~~~y~~~ad~~~~~~l~~~~~~~~~TpgGl~~~~~  342 (629)
T PLN02171        263 GNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFFMCSCLGKGARNVQKTPGGLIYRQR  342 (629)
T ss_pred             HHHHHhhccCcccCccccccccchHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHhhccCCCceeeecCCeeEEECC
Confidence            98776666667777789999999999999999876655445667888999999999999887765678999999999999


Q ss_pred             CChHHHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhchhhhcCCCCCCCceEEeeCCCCCcccccCcccc
Q 009760          335 WNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSI  414 (526)
Q Consensus       335 Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~a~~q~dYiLG~Np~~~SyVtG~G~~~p~~pHHR~s~~  414 (526)
                      |||+||++|++||+++|+|++......++|+.+.....+|++||++|||||||+||+++|||||||+|+|++||||+|+|
T Consensus       343 Wgs~~y~~naafl~~vyad~~~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~Np~~~SYvVGyG~n~P~~pHHR~as~  422 (629)
T PLN02171        343 WNNMQFVTSASFLLTVYSDYLASSGRALRCAAGNAAPSQLLAFAKSQVDYILGDNPRATSYMVGYGANYPRQVHHRGSSI  422 (629)
T ss_pred             CChHHHHHHHHHHHHHHHHHhhhcccccccccccCCHHHHHHHHHHhhhhhcCCCCCCCceEeecCCCCCCCcccccccC
Confidence            99999999999999999999877666799988878899999999999999999999999999999999999999999999


Q ss_pred             cccccCCCcccCCCCccccccCCCCCCCCcccceecCCCCCCCcccCCCcccccccccCCccHHHHHHHHHhccCCCccc
Q 009760          415 VSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQ  494 (526)
Q Consensus       415 ~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~lA~l~~~~~~~~~  494 (526)
                      |.++.+|..++|.+||++|++++.+||++|+||||||||..|+|.|+|.+|++||||||||||||++||+|...+||..+
T Consensus       423 ~~~~~~~~~~~C~~g~~~~~~~~~~np~vl~GAlVGGPd~~D~y~D~r~~y~~nEva~d~NA~~vg~lA~l~~~~~~~~~  502 (629)
T PLN02171        423 VSIKVDPSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGVLARLAGGHGGYNQ  502 (629)
T ss_pred             CccccCccccCCCCccchhccCCCCCCCcccCceecCCCcCCCCCccccccccCceeEecchHHHHHHHHHHhhcCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998888764


Q ss_pred             C
Q 009760          495 L  495 (526)
Q Consensus       495 ~  495 (526)
                      .
T Consensus       503 ~  503 (629)
T PLN02171        503 L  503 (629)
T ss_pred             c
Confidence            3

>PLN02340 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query526
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 2e-98
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 1e-87
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 1e-84
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 2e-73
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 9e-73
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 1e-72
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 2e-63
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 1e-52
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 2e-06
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  356 bits (913), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 205/470 (43%), Positives = 271/470 (57%), Gaps = 43/470 (9%)
Query: 20  GHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKF 79
            +DY Q L  S+LF+EAQRSG LP +Q+VTWR +S LND    G DL GGY+DAGD VKF
Sbjct: 2   AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKF 61
Query: 80  GLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGN 139
           G PMA+T T+++W +I++    +++G L     A+KW TDYFIKAH   N  YG+VG G+
Sbjct: 62  GFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGD 121
Query: 140 TDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETXXXXXXXSIVFRHSDPAYSSELLRHA 199
            DH  W RPEDMT  R AYKID S PGSDLAGET       SIVFR+ D  YS+ LL HA
Sbjct: 122 ADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHA 181
Query: 200 YQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGD 259
            QLFDFA+ YRGKY  SIT A+ +Y S + Y DEL+WAAAWLY+A+ +  YL+      D
Sbjct: 182 RQLFDFANNYRGKYSDSITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240
Query: 260 SMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGS 319
             G   WG     WD K  GVQ L+AK   +          + Y+   + ++   +    
Sbjct: 241 EFGLQNWG-GGLNWDSKVSGVQVLLAKLTNK----------QAYKDTVQSYVNYLI---- 285
Query: 320 RNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAK 379
            N QKTP GL++   W  ++   +A+F+              L+ +   ++ +    FA+
Sbjct: 286 NNQQKTPKGLLYIDMWGTLRHAANAAFIM-------------LEAAELGLSASSYRQFAQ 332
Query: 380 SQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGS 439
           +Q+DY LGD  R  S++ G+G+N P R HHR+SS       P+  +C      W +    
Sbjct: 333 TQIDYALGDGGR--SFVCGFGSNPPTRPHHRSSSCP-----PAPATC-----DWNTFNSP 380
Query: 440 DPN--LLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNA 487
           DPN  +L GA+VGGPD  DN+ D R +Y   E AT  NA     LA L A
Sbjct: 381 DPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVA 430
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query526
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 0.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 0.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 0.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 0.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-176
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-172
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-160
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-152
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-142
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 4e-86
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
 Score =  527 bits (1358), Expect = 0.0
 Identities = 208/471 (44%), Positives = 275/471 (58%), Gaps = 40/471 (8%)

Query: 20  GHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKF 79
            +DY Q L  S+LF+EAQRSG LP +Q+VTWR +S LND    G DL GGY+DAGD VKF
Sbjct: 2   AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKF 61

Query: 80  GLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGN 139
           G PMA+T T+++W +I++    +++G L     A+KW TDYFIKAH   N  YG+VG G+
Sbjct: 62  GFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGD 121

Query: 140 TDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHA 199
            DH  W RPEDMT  R AYKID S PGSDLAGETAAA+AAASIVFR+ D  YS+ LL HA
Sbjct: 122 ADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHA 181

Query: 200 YQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGD 259
            QLFDFA+ YRGKY  SIT A+ +Y S + Y DEL+WAAAWLY+A+ +  YL+      D
Sbjct: 182 RQLFDFANNYRGKYSDSITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240

Query: 260 SMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGS 319
             G   WG     WD K  GVQ L+AK   +          + Y+   + ++   +    
Sbjct: 241 EFGLQNWGG-GLNWDSKVSGVQVLLAKLTNK----------QAYKDTVQSYVNYLIN--- 286

Query: 320 RNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAK 379
            N QKTP GL++   W  ++   +A+F+    ++   S              +    FA+
Sbjct: 287 -NQQKTPKGLLYIDMWGTLRHAANAAFIMLEAAELGLS-------------ASSYRQFAQ 332

Query: 380 SQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGS 439
           +Q+DY LGD  R  S++ G+G+N P R HHR+SS         +          F+S   
Sbjct: 333 TQIDYALGDGGR--SFVCGFGSNPPTRPHHRSSSCPPAPATCDWN--------TFNSPDP 382

Query: 440 DPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNA-GH 489
           + ++L GA+VGGPD  DN+ D R +Y   E AT  NA     LA L A G+
Sbjct: 383 NYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVALGY 433
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query526
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.76
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 95.59
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 95.23
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 94.95
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 93.76
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 93.27
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 89.83
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 88.37
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 88.0
3k11_A445 Putative glycosyl hydrolase; structural genomics, 84.88
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 82.31
1nc5_A373 Hypothetical protein YTER; structural genomics, he 80.92
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 80.48
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
Probab=100.00  E-value=1.6e-112  Score=913.48  Aligned_cols=440  Identities=41%  Similarity=0.719  Sum_probs=392.4

Q ss_pred             ccchhhHHHHHHHHHHHHHHhcCCCC-CCCCCccccCCCCCCCCCCCccccccceecCCCCcccccChhHHHHHHHHHHH
Q 009760           17 ALAGHDYGQALSKSILFFEAQRSGYL-PHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSII   95 (526)
Q Consensus        17 ~~~~~~Y~~~l~~sl~ff~~QRsG~~-p~~~~~~w~~~~~~~D~~~~~~dlsGGW~DAGD~~Ky~~~~a~s~~~L~~~~~   95 (526)
                      +.+.++|.++|++||+||++||||++ |+.+|+.||++||++|+++.++||+|||||||||+||++|+++++++|+|+++
T Consensus        20 ~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~~~   99 (466)
T 2xfg_A           20 ATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAVY   99 (466)
T ss_dssp             -CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHHHH
Confidence            56679999999999999999999998 99999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHhcCChHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChhHHHHHHH
Q 009760           96 EYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAA  175 (526)
Q Consensus        96 e~~~~~~~~~~~~dlLde~kwg~d~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AA  175 (526)
                      ||++.|++++++||+|||||||+||||||++++|.||+||||+..||.+|++||+|+++|++|.+++++|+|++++++||
T Consensus       100 e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AA  179 (466)
T 2xfg_A          100 EYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSA  179 (466)
T ss_dssp             HCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHH
T ss_pred             HhHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999989999999999999


Q ss_pred             HHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccCcccCCCCchhHHHHHHHHHHHHhCChhHHHHHh
Q 009760          176 AMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLG  255 (526)
Q Consensus       176 alA~Aa~v~k~~D~~~A~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAA~eLy~aTg~~~Y~~~~~  255 (526)
                      |||+||||||++||+||++||++||++|+||+++|+.|..  +..++||+|.+++.||++|||+|||++|||++|+++++
T Consensus       180 AlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~--~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~  257 (466)
T 2xfg_A          180 ALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGY--TAANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDKAE  257 (466)
T ss_dssp             HHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTC--CTTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred             HHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCC--CccccccCCCCCCchHHHHHHHHHHHHhCCHHHHHHHH
Confidence            9999999999999999999999999999999999998843  45678999768999999999999999999999999999


Q ss_pred             hcccCCCC----CCC-CccccCCCCcchHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHhhcCCCCccccCCCCce
Q 009760          256 KNGDSMGG----TGW-GMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLI  330 (526)
Q Consensus       256 ~~~~~~~~----~~~-~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~t~~G~~  330 (526)
                      ++...++.    ..+ ....|+||++..|++++|+++.  ++.+   ..++.++..++.+++   ...++++++||+|+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~tp~Gl~  329 (466)
T 2xfg_A          258 SYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIK--NDNG---KYKEAIERHLDWWTT---GYNGERITYTPKGLA  329 (466)
T ss_dssp             HTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHH--CSSC---HHHHHHHHHHHHHTT---CBTTBCCCBCTTSCB
T ss_pred             HHHHHhccccccccccccCcCCcchhHHHHHHHHHHhc--CCcH---HHHHHHHHHHHHHHh---ccCCCccccCCcccc
Confidence            87654431    111 1247999999999999998763  2221   223444555555543   235578899999999


Q ss_pred             ecccCChHHHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhchhhhcCCCCCCCceEEeeCCCCCcccccC
Q 009760          331 FRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHR  410 (526)
Q Consensus       331 ~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~a~~q~dYiLG~Np~~~SyVtG~G~~~p~~pHHR  410 (526)
                      |...|||+||++|.+||+++|++++.       |  +..++.+|+++|++|||||||+|  ++|||||||+|+|++||||
T Consensus       330 ~~~~Wgs~~~~~n~afl~~~y~~~~~-------~--~~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pHHR  398 (466)
T 2xfg_A          330 WLDQWGSLRYATTTAFLACVYSDWEN-------G--DKEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPHHR  398 (466)
T ss_dssp             CCCSSSHHHHHHHHHHHHHHHHTCTT-------S--CHHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCH
T ss_pred             ccCCCCchHHHHHHHHHHHHHHHhcC-------C--CcccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCcCc
Confidence            99999999999999999999988742       2  11346899999999999999999  9999999999999999999


Q ss_pred             cccccccccCCCcccCCCCccccccCCCCCCCCcccceecCCCCCCCcccCCCcccccccccCCccHHHHHHHHHhccCC
Q 009760          411 ASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHG  490 (526)
Q Consensus       411 ~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~lA~l~~~~~  490 (526)
                      +++++..              .+++.+.|++++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|....|
T Consensus       399 ~ss~~~~--------------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~g  464 (466)
T 2xfg_A          399 TAHGSWA--------------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYKLYG  464 (466)
T ss_dssp             HHHTCSS--------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             hhccCcc--------------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHHHHHcC
Confidence            9988521              23456788999999999999999999999999999999999999999999999999888


Q ss_pred             C
Q 009760          491 G  491 (526)
Q Consensus       491 ~  491 (526)
                      |
T Consensus       465 ~  465 (466)
T 2xfg_A          465 E  465 (466)
T ss_dssp             C
T ss_pred             C
Confidence            6
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 526
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-177
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-169
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-167
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-158
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-127
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-117
d2afaa1411 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {S 2e-04
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  505 bits (1301), Expect = e-177
 Identities = 194/478 (40%), Positives = 264/478 (55%), Gaps = 42/478 (8%)

Query: 21  HDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFG 80
            +Y +AL KS+ F+EAQRSG LP N RV+WR +SGLNDG   G+DL GG+YDAGD+VKFG
Sbjct: 4   FNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFG 63

Query: 81  LPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNT 140
            PMAFT TM++W  IE  +    SG++ +  + ++W  DYFIKAHP PNVLY +VGDG+ 
Sbjct: 64  FPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDA 123

Query: 141 DHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAY 200
           DH  W   E M  +R ++K+DPS PGSD+A ETAAAMAA+SIVF   DPAY++ L++HA 
Sbjct: 124 DHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAK 183

Query: 201 QLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDS 260
           QL+ FAD YRG Y   +     Y  S SGY DEL+W A WLY+A+G+  YL       D 
Sbjct: 184 QLYTFADTYRGVYSDCVPAGAFYN-SWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDF 242

Query: 261 MGGTGWG-----MTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCL 315
           +                WD K  G   L+AK              ++Y   A  ++    
Sbjct: 243 LSTEQQTDLRSYRWTIAWDDKSYGTYVLLAK----------ETGKQKYIDDANRWLDYWT 292

Query: 316 -GKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAEL 374
            G   + V  +PGG+     W  +++  + +F+A VY+  +    R              
Sbjct: 293 VGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDPVR----------KQRY 342

Query: 375 LGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWF 434
             FA  Q++Y LGDNPR +SY+VG+GNN P+  HHR +               G +    
Sbjct: 343 HDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH--------------GSWTDSI 388

Query: 435 SSKGSDPNLLVGAVVGGPDA-YDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 491
           +S   + ++L GA+VGGP +  D + D R +Y   E AT  NA     LA L   +GG
Sbjct: 389 ASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG 446
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Length = 411 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query526
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 89.96
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 88.54
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 87.04
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=1.1e-105  Score=861.61  Aligned_cols=438  Identities=44%  Similarity=0.760  Sum_probs=382.8

Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCCCCCCCccccCCCCCCCCCCCccccccceecCCCCcccccChhHHHHHHHHHHHHhHH
Q 009760           20 GHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGK   99 (526)
Q Consensus        20 ~~~Y~~~l~~sl~ff~~QRsG~~p~~~~~~w~~~~~~~D~~~~~~dlsGGW~DAGD~~Ky~~~~a~s~~~L~~~~~e~~~   99 (526)
                      ..+|.++|++||+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++|++
T Consensus         3 ~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~~   82 (460)
T d1tf4a1           3 AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPE   82 (460)
T ss_dssp             SSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHH
T ss_pred             CCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHChH
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCChHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCCcceeecCCCCCChhHHHHHHHHHHH
Q 009760          100 QMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAA  179 (526)
Q Consensus       100 ~~~~~~~~~dlLde~kwg~d~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~~~~~AAalA~  179 (526)
                      .++++|++||||||+|||+|||+|||+++|.||+|||++..||+.|++|+.++.+|+.+.+....|+|++++++|||||+
T Consensus        83 ~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA~  162 (460)
T d1tf4a1          83 GYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAA  162 (460)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHH
T ss_pred             hhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999888888999999999999999


Q ss_pred             HhhhcccCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccCcccCCCCchhHHHHHHHHHHHHhCChhHHHHHhhccc
Q 009760          180 ASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGD  259 (526)
Q Consensus       180 Aa~v~k~~D~~~A~~~l~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAA~eLy~aTg~~~Y~~~~~~~~~  259 (526)
                      |||||+++||+||++||++||++|+||+++|+.|.+..+....+| +++++.||++|||+|||++|||++|+++++....
T Consensus       163 as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~~~~~~-~~~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~~~  241 (460)
T d1tf4a1         163 SSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYN-SWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYD  241 (460)
T ss_dssp             HHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHC-CSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHGG
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCcCC-CccccchHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence            999999999999999999999999999999999977665444445 4588999999999999999999999999987553


Q ss_pred             CCCC---C--CCCccccCCCCcchHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHhhcC-CCCccccCCCCceecc
Q 009760          260 SMGG---T--GWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQ  333 (526)
Q Consensus       260 ~~~~---~--~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~-~~~~~~~t~~G~~~~~  333 (526)
                      .+..   .  ......++|+++..++.+++++...          .+.+++.++.+++..... ..+++++++.++.+.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (460)
T d1tf4a1         242 FLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETG----------KQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLD  311 (460)
T ss_dssp             GSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHHC----------CHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCC
T ss_pred             hcccccccccccccccccccchhHHHHHHHHHHhh----------hhHHHHHHHHHHHHHhhhcccccCCcCCCcceecC
Confidence            3221   1  1112468999998888877765431          122334445555433332 4456778899999999


Q ss_pred             cCChHHHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhchhhhcCCCCCCCceEEeeCCCCCcccccCccc
Q 009760          334 RWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASS  413 (526)
Q Consensus       334 ~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~a~~q~dYiLG~Np~~~SyVtG~G~~~p~~pHHR~s~  413 (526)
                      .|||+++++|.+|++++++++..+          .+++.+|+++|++|||||||+||+++|||||+|+|+|++||||+++
T Consensus       312 ~WGsn~~~~n~a~~~~~a~~~~~~----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s~  381 (460)
T d1tf4a1         312 TWGALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH  381 (460)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHhcc----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCcccc
Confidence            999999999999999999886421          1335799999999999999999999999999999999999999988


Q ss_pred             ccccccCCCcccCCCCccccccCCCCCCCCcccceecCCC-CCCCcccCCCcccccccccCCccHHHHHHHHHhccCCCc
Q 009760          414 IVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPD-AYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGY  492 (526)
Q Consensus       414 ~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn-~~d~y~D~~~~y~~NEvaId~NA~lv~~lA~l~~~~~~~  492 (526)
                      ++.              ..+...+.||+++++|+|||||| +.++|+|++++|++||||||||||||++||+|++..|+-
T Consensus       382 ~~~--------------~~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~~~  447 (460)
T d1tf4a1         382 GSW--------------TDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGGT  447 (460)
T ss_dssp             TCS--------------SSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCCC
T ss_pred             CCC--------------ccccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHhcCCC
Confidence            752              13455678899999999999999 589999999999999999999999999999999987754
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure