Query 009761
Match_columns 526
No_of_seqs 445 out of 4047
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 17:01:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009761.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009761hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK11498 bcsA cellulose syntha 100.0 6.6E-48 1.4E-52 413.2 46.8 344 87-454 256-613 (852)
2 TIGR03030 CelA cellulose synth 100.0 5.2E-47 1.1E-51 410.5 48.1 347 87-453 127-501 (713)
3 PRK11204 N-glycosyltransferase 100.0 1.4E-43 3E-48 366.2 43.9 245 87-342 50-294 (420)
4 PRK14583 hmsR N-glycosyltransf 100.0 1.6E-43 3.4E-48 366.4 43.7 243 88-341 72-314 (444)
5 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 5.1E-41 1.1E-45 346.6 41.6 243 87-338 45-297 (439)
6 PRK05454 glucosyltransferase M 100.0 2E-39 4.4E-44 344.0 49.0 259 87-354 120-398 (691)
7 cd06437 CESA_CaSu_A2 Cellulose 100.0 6.7E-41 1.5E-45 318.3 24.8 232 91-327 1-232 (232)
8 PRK14716 bacteriophage N4 adso 100.0 6.2E-38 1.4E-42 321.8 40.7 242 87-337 62-334 (504)
9 PLN02893 Cellulose synthase-li 100.0 3.2E-36 6.9E-41 312.8 41.4 305 45-357 56-525 (734)
10 COG1215 Glycosyltransferases, 100.0 1.1E-36 2.4E-41 317.3 33.5 236 90-334 53-291 (439)
11 cd06427 CESA_like_2 CESA_like_ 100.0 3.7E-37 8E-42 294.2 23.8 237 91-336 1-239 (241)
12 cd04191 Glucan_BSP_ModH Glucan 100.0 4.9E-37 1.1E-41 292.0 24.3 230 93-329 1-253 (254)
13 TIGR03472 HpnI hopanoid biosyn 100.0 2E-35 4.2E-40 299.3 32.8 231 88-327 38-272 (373)
14 cd06435 CESA_NdvC_like NdvC_li 100.0 4.5E-36 9.8E-41 285.9 24.7 234 94-334 1-235 (236)
15 PRK11234 nfrB bacteriophage N4 100.0 7.9E-34 1.7E-38 303.0 39.3 240 87-335 59-337 (727)
16 PRK15489 nfrB bacteriophage N4 100.0 2.4E-33 5.2E-38 295.1 37.4 241 87-337 67-347 (703)
17 cd06421 CESA_CelA_like CESA_Ce 100.0 3.9E-34 8.5E-39 272.0 23.5 230 91-330 1-233 (234)
18 PF13641 Glyco_tranf_2_3: Glyc 100.0 2E-35 4.4E-40 279.8 8.3 225 91-326 1-228 (228)
19 cd02520 Glucosylceramide_synth 100.0 9E-34 1.9E-38 261.9 17.7 191 91-326 1-195 (196)
20 cd04190 Chitin_synth_C C-termi 100.0 3.8E-34 8.2E-39 273.3 14.7 203 95-328 1-242 (244)
21 PLN02189 cellulose synthase 100.0 1.3E-30 2.9E-35 276.5 36.8 394 46-453 283-923 (1040)
22 PLN02195 cellulose synthase A 100.0 3.3E-30 7.2E-35 272.0 38.0 395 45-453 203-858 (977)
23 PLN02248 cellulose synthase-li 100.0 4.6E-30 1E-34 272.9 36.6 325 154-494 587-1056(1135)
24 PLN02638 cellulose synthase A 100.0 4.3E-30 9.3E-35 273.4 35.6 395 46-453 301-961 (1079)
25 PLN02190 cellulose synthase-li 100.0 1.5E-30 3.4E-35 268.9 30.7 387 46-453 51-640 (756)
26 cd06434 GT2_HAS Hyaluronan syn 100.0 2.9E-31 6.3E-36 252.5 19.2 222 92-328 1-233 (235)
27 PLN02400 cellulose synthase 100.0 7.3E-30 1.6E-34 271.8 30.9 309 45-358 307-863 (1085)
28 PLN02436 cellulose synthase A 100.0 4.1E-29 8.9E-34 264.9 36.1 394 46-453 317-977 (1094)
29 TIGR03469 HonB hopene-associat 100.0 1.1E-28 2.5E-33 250.7 36.7 231 87-325 36-280 (384)
30 PLN02915 cellulose synthase A 100.0 1.3E-28 2.7E-33 261.6 36.8 308 46-358 239-822 (1044)
31 PF03142 Chitin_synth_2: Chiti 100.0 2E-29 4.4E-34 256.4 27.6 361 89-456 23-500 (527)
32 cd04192 GT_2_like_e Subfamily 100.0 1.9E-29 4.1E-34 238.8 22.5 222 95-326 1-229 (229)
33 cd06439 CESA_like_1 CESA_like_ 100.0 1.9E-29 4.1E-34 242.5 22.0 225 87-329 25-250 (251)
34 COG2943 MdoH Membrane glycosyl 100.0 3.4E-26 7.3E-31 222.9 37.9 348 91-452 144-551 (736)
35 cd02525 Succinoglycan_BP_ExoA 100.0 5.8E-28 1.3E-32 231.7 23.7 230 92-334 1-234 (249)
36 PF03552 Cellulose_synt: Cellu 99.9 3.7E-26 8E-31 236.0 22.4 287 154-453 168-607 (720)
37 cd04184 GT2_RfbC_Mx_like Myxoc 99.9 1.2E-25 2.5E-30 208.7 16.8 197 91-306 1-199 (202)
38 cd06438 EpsO_like EpsO protein 99.9 1.1E-25 2.3E-30 205.6 15.7 180 95-286 1-183 (183)
39 cd02510 pp-GalNAc-T pp-GalNAc- 99.9 2.9E-25 6.4E-30 218.9 19.8 209 94-310 1-227 (299)
40 cd06436 GlcNAc-1-P_transferase 99.9 7.3E-25 1.6E-29 201.4 17.7 179 95-283 1-191 (191)
41 cd04195 GT2_AmsE_like GT2_AmsE 99.9 7.3E-25 1.6E-29 203.2 17.0 197 94-306 1-199 (201)
42 PF13632 Glyco_trans_2_3: Glyc 99.9 2.4E-22 5.3E-27 185.1 18.5 142 184-327 1-143 (193)
43 cd06913 beta3GnTL1_like Beta 1 99.9 4.8E-22 1E-26 186.9 20.7 201 95-306 1-207 (219)
44 cd06433 GT_2_WfgS_like WfgS an 99.9 1.1E-22 2.4E-27 188.1 15.9 191 94-306 1-192 (202)
45 PLN02726 dolichyl-phosphate be 99.9 5.4E-22 1.2E-26 189.6 20.9 210 88-311 6-221 (243)
46 cd02526 GT2_RfbF_like RfbF is 99.9 8.4E-23 1.8E-27 194.5 14.7 203 95-313 1-209 (237)
47 cd04196 GT_2_like_d Subfamily 99.9 1.6E-22 3.5E-27 189.2 15.5 197 94-305 1-200 (214)
48 cd04185 GT_2_like_b Subfamily 99.9 3.1E-22 6.8E-27 185.7 16.9 177 95-314 1-179 (202)
49 cd04186 GT_2_like_c Subfamily 99.9 4.1E-22 8.8E-27 178.3 16.0 163 95-308 1-165 (166)
50 cd06442 DPM1_like DPM1_like re 99.9 1.3E-21 2.7E-26 184.6 20.0 202 95-311 1-206 (224)
51 cd02522 GT_2_like_a GT_2_like_ 99.9 1.5E-21 3.2E-26 183.8 20.0 184 93-306 1-184 (221)
52 cd06420 GT2_Chondriotin_Pol_N 99.9 1.1E-21 2.5E-26 178.7 18.6 176 95-307 1-180 (182)
53 PRK10073 putative glycosyl tra 99.9 6.3E-22 1.4E-26 196.3 16.2 201 90-305 5-213 (328)
54 cd06423 CESA_like CESA_like is 99.9 4.9E-22 1.1E-26 179.0 13.3 180 95-283 1-180 (180)
55 PRK10018 putative glycosyl tra 99.9 5.2E-21 1.1E-25 184.6 18.2 225 89-334 3-231 (279)
56 PTZ00260 dolichyl-phosphate be 99.9 4.1E-19 9E-24 176.3 28.5 240 88-339 67-321 (333)
57 PF13506 Glyco_transf_21: Glyc 99.8 1E-20 2.3E-25 169.7 13.7 155 162-325 14-175 (175)
58 COG1216 Predicted glycosyltran 99.8 2.7E-20 5.8E-25 183.7 17.8 213 90-312 2-224 (305)
59 PRK10063 putative glycosyl tra 99.8 8.2E-20 1.8E-24 174.1 18.1 190 91-306 1-194 (248)
60 cd04188 DPG_synthase DPG_synth 99.8 1.5E-19 3.3E-24 168.9 19.5 200 95-311 1-209 (211)
61 TIGR01556 rhamnosyltran L-rham 99.8 4.8E-19 1E-23 173.1 16.0 199 99-312 2-205 (281)
62 PF10111 Glyco_tranf_2_2: Glyc 99.8 3.6E-18 7.7E-23 166.3 20.4 207 94-309 1-223 (281)
63 KOG2547 Ceramide glucosyltrans 99.8 4.8E-19 1E-23 166.8 13.4 233 88-327 82-316 (431)
64 cd04179 DPM_DPG-synthase_like 99.8 2.5E-18 5.3E-23 157.0 15.3 179 95-289 1-184 (185)
65 PRK13915 putative glucosyl-3-p 99.8 9.2E-18 2E-22 164.4 18.0 198 88-301 28-238 (306)
66 KOG2571 Chitin synthase/hyalur 99.8 1.2E-17 2.6E-22 176.0 18.8 147 180-328 439-598 (862)
67 PF00535 Glycos_transf_2: Glyc 99.8 2.1E-19 4.5E-24 160.7 4.6 169 94-273 1-169 (169)
68 PRK10714 undecaprenyl phosphat 99.8 1.7E-15 3.8E-20 150.0 31.2 191 91-303 6-199 (325)
69 cd04187 DPM1_like_bac Bacteria 99.8 2.8E-17 6.1E-22 149.6 16.7 175 95-288 1-179 (181)
70 cd00761 Glyco_tranf_GTA_type G 99.7 2.9E-15 6.3E-20 131.2 15.5 153 95-298 1-155 (156)
71 KOG2978 Dolichol-phosphate man 99.6 1.3E-14 2.9E-19 124.1 15.6 197 91-304 3-209 (238)
72 cd02511 Beta4Glucosyltransfera 99.5 1.9E-13 4.1E-18 129.2 14.6 105 92-215 1-105 (229)
73 KOG3738 Predicted polypeptide 99.4 1.5E-12 3.3E-17 123.9 9.7 231 88-331 121-379 (559)
74 COG0463 WcaA Glycosyltransfera 99.4 2.6E-12 5.6E-17 119.8 11.1 106 90-206 2-107 (291)
75 KOG3737 Predicted polypeptide 99.4 2.2E-12 4.7E-17 122.5 10.2 212 87-305 151-384 (603)
76 KOG2977 Glycosyltransferase [G 99.4 5.8E-11 1.3E-15 108.9 18.3 208 92-312 68-291 (323)
77 KOG3736 Polypeptide N-acetylga 99.2 5.4E-12 1.2E-16 129.7 5.1 211 87-306 138-367 (578)
78 cd02514 GT13_GLCNAC-TI GT13_GL 99.2 1E-09 2.2E-14 107.2 16.4 178 93-302 2-202 (334)
79 PF13712 Glyco_tranf_2_5: Glyc 99.0 8.2E-09 1.8E-13 95.9 13.6 179 96-314 3-203 (217)
80 cd00899 b4GalT Beta-4-Galactos 98.6 3E-07 6.4E-12 84.0 11.5 177 92-330 3-199 (219)
81 PF03452 Anp1: Anp1; InterPro 98.0 8E-05 1.7E-09 70.1 11.5 118 87-205 21-167 (269)
82 COG4092 Predicted glycosyltran 97.9 0.0011 2.4E-08 61.0 16.8 196 91-292 2-215 (346)
83 PF03071 GNT-I: GNT-I family; 97.9 0.00017 3.6E-09 72.7 12.7 204 88-319 90-317 (434)
84 KOG3588 Chondroitin synthase 1 97.6 0.0015 3.2E-08 62.9 13.3 199 87-305 225-434 (494)
85 PF05679 CHGN: Chondroitin N-a 97.4 0.0051 1.1E-07 64.7 15.5 202 90-305 246-464 (499)
86 PF09488 Osmo_MPGsynth: Mannos 97.3 0.0015 3.2E-08 63.1 9.7 125 91-223 50-205 (381)
87 PRK14503 mannosyl-3-phosphogly 97.2 0.0026 5.7E-08 61.4 10.3 191 91-294 51-283 (393)
88 TIGR02460 osmo_MPGsynth mannos 97.2 0.0028 6.1E-08 60.8 10.2 191 91-294 50-282 (381)
89 PF13704 Glyco_tranf_2_4: Glyc 97.1 0.0015 3.3E-08 52.3 6.5 81 100-194 1-84 (97)
90 PF02709 Glyco_transf_7C: N-te 97.1 0.00071 1.5E-08 51.5 4.0 49 257-305 19-70 (78)
91 KOG3916 UDP-Gal:glucosylcerami 96.9 0.0036 7.8E-08 59.9 7.6 178 92-332 152-349 (372)
92 PRK14502 bifunctional mannosyl 96.4 0.03 6.6E-07 59.8 11.7 99 91-197 55-180 (694)
93 PF11316 Rhamno_transf: Putati 96.3 0.034 7.3E-07 52.1 10.0 94 106-206 44-139 (234)
94 KOG1413 N-acetylglucosaminyltr 95.8 0.19 4.2E-06 48.6 12.4 177 89-285 65-258 (411)
95 PF06306 CgtA: Beta-1,4-N-acet 95.4 0.047 1E-06 52.1 6.8 103 92-202 88-196 (347)
96 PF01644 Chitin_synth_1: Chiti 94.6 0.55 1.2E-05 40.9 10.8 43 161-206 117-163 (163)
97 PF01762 Galactosyl_T: Galacto 94.5 0.31 6.8E-06 44.5 9.9 179 104-298 4-192 (195)
98 PF02434 Fringe: Fringe-like; 94.5 0.32 6.9E-06 46.4 10.0 107 181-301 86-203 (252)
99 PF11397 GlcNAc: Glycosyltrans 93.8 0.21 4.5E-06 49.7 7.5 210 93-307 2-261 (343)
100 cd04182 GT_2_like_f GT_2_like_ 93.7 0.87 1.9E-05 40.8 11.1 93 101-207 24-117 (186)
101 TIGR03310 matur_ygfJ molybdenu 93.6 0.63 1.4E-05 42.0 10.0 99 97-211 20-120 (188)
102 TIGR03584 PseF pseudaminic aci 93.5 1.1 2.5E-05 41.8 11.7 158 101-275 22-189 (222)
103 PF09258 Glyco_transf_64: Glyc 93.4 0.22 4.8E-06 47.3 6.8 104 93-211 1-105 (247)
104 PF13733 Glyco_transf_7N: N-te 93.3 0.14 3E-06 43.0 4.5 76 91-197 47-127 (136)
105 cd00218 GlcAT-I Beta1,3-glucur 93.1 1.6 3.5E-05 40.2 11.5 103 91-202 1-116 (223)
106 COG1212 KdsB CMP-2-keto-3-deox 93.0 3.7 8E-05 37.7 13.3 180 104-300 29-219 (247)
107 PLN02917 CMP-KDO synthetase 92.4 3.7 8.1E-05 40.1 13.9 183 103-301 72-266 (293)
108 PF02364 Glucan_synthase: 1,3- 92.1 0.73 1.6E-05 50.4 9.1 181 165-353 275-482 (817)
109 cd02540 GT2_GlmU_N_bac N-termi 92.1 2.5 5.4E-05 39.4 12.0 97 96-208 20-117 (229)
110 TIGR03202 pucB xanthine dehydr 91.1 2.8 6E-05 37.9 10.9 101 101-210 24-125 (190)
111 KOG1476 Beta-1,3-glucuronyltra 91.1 3 6.4E-05 40.2 11.0 102 90-201 86-201 (330)
112 PLN02458 transferase, transfer 90.9 4.7 0.0001 39.2 12.2 104 90-202 111-223 (346)
113 PF11735 CAP59_mtransfer: Cryp 89.9 6.9 0.00015 36.9 12.4 121 94-217 3-146 (241)
114 PF04666 Glyco_transf_54: N-Ac 89.8 3.3 7.1E-05 40.4 10.5 120 89-209 50-197 (297)
115 PLN03153 hypothetical protein; 89.6 1.9 4E-05 44.7 8.9 99 180-302 209-314 (537)
116 PF12804 NTP_transf_3: MobA-li 89.0 2.4 5.1E-05 37.0 8.4 101 97-215 19-121 (160)
117 cd06422 NTP_transferase_like_1 88.8 4 8.7E-05 37.8 10.3 101 90-205 20-120 (221)
118 cd02516 CDP-ME_synthetase CDP- 88.8 4 8.7E-05 37.7 10.2 103 96-210 22-125 (218)
119 KOG4179 Lysyl hydrolase/glycos 88.7 0.62 1.3E-05 46.1 4.6 109 91-204 3-133 (568)
120 PF03214 RGP: Reversibly glyco 88.6 0.19 4.2E-06 48.4 1.1 35 169-206 82-116 (348)
121 PRK00317 mobA molybdopterin-gu 88.2 4.8 0.00011 36.4 10.1 43 164-209 74-117 (193)
122 cd02503 MobA MobA catalyzes th 87.8 5.4 0.00012 35.6 10.1 85 101-206 24-109 (181)
123 cd04181 NTP_transferase NTP_tr 87.8 5.2 0.00011 36.8 10.3 97 96-206 23-119 (217)
124 cd04183 GT2_BcE_like GT2_BcbE_ 87.2 5.8 0.00013 37.0 10.3 99 96-205 23-121 (231)
125 COG1213 Predicted sugar nucleo 86.4 2 4.3E-05 39.8 6.2 98 102-215 30-128 (239)
126 PRK14353 glmU bifunctional N-a 86.3 8.1 0.00017 40.3 11.8 103 96-212 27-130 (446)
127 cd06915 NTP_transferase_WcbM_l 85.4 9 0.00019 35.3 10.6 98 96-207 23-120 (223)
128 PRK13385 2-C-methyl-D-erythrit 85.3 10 0.00022 35.4 10.9 99 101-210 28-127 (230)
129 PLN03180 reversibly glycosylat 85.2 2.2 4.8E-05 41.5 6.2 88 91-197 11-109 (346)
130 TIGR02665 molyb_mobA molybdopt 84.2 9.1 0.0002 34.3 9.7 41 164-207 73-114 (186)
131 PF13896 Glyco_transf_49: Glyc 83.8 8.3 0.00018 38.1 9.8 53 166-221 115-170 (317)
132 cd04189 G1P_TT_long G1P_TT_lon 83.4 14 0.00031 34.4 11.1 97 96-206 25-121 (236)
133 PF05060 MGAT2: N-acetylglucos 83.4 8.4 0.00018 38.3 9.4 51 91-142 31-81 (356)
134 cd06425 M1P_guanylylT_B_like_N 83.4 7 0.00015 36.6 8.9 101 96-208 25-126 (233)
135 PF14097 SpoVAE: Stage V sporu 82.7 24 0.00052 30.9 10.6 94 124-224 2-95 (180)
136 PRK02726 molybdopterin-guanine 82.5 6.5 0.00014 35.9 8.0 88 101-207 31-119 (200)
137 TIGR01173 glmU UDP-N-acetylglu 82.0 15 0.00032 38.3 11.5 103 96-216 22-125 (451)
138 cd02513 CMP-NeuAc_Synthase CMP 81.3 28 0.0006 32.0 12.1 95 101-208 24-125 (223)
139 PRK14355 glmU bifunctional N-a 81.3 17 0.00037 38.1 11.7 98 96-208 25-123 (459)
140 COG1211 IspD 4-diphosphocytidy 81.1 16 0.00034 34.1 9.9 172 100-304 29-208 (230)
141 PF05045 RgpF: Rhamnan synthes 79.9 48 0.001 35.1 14.3 174 89-272 263-461 (498)
142 PRK13368 3-deoxy-manno-octulos 79.9 24 0.00051 33.0 11.2 93 101-210 25-118 (238)
143 TIGR00466 kdsB 3-deoxy-D-manno 79.4 36 0.00078 32.0 12.1 184 101-301 22-222 (238)
144 PF00483 NTP_transferase: Nucl 78.9 7.7 0.00017 36.6 7.5 99 96-206 24-126 (248)
145 cd02517 CMP-KDO-Synthetase CMP 78.7 23 0.00049 33.2 10.7 101 96-212 20-121 (239)
146 PRK15480 glucose-1-phosphate t 78.4 17 0.00036 35.6 9.7 99 96-206 28-126 (292)
147 cd02508 ADP_Glucose_PP ADP-glu 78.4 21 0.00045 32.5 10.0 109 90-208 19-136 (200)
148 PLN03183 acetylglucosaminyltra 78.2 87 0.0019 32.2 15.0 108 87-199 74-193 (421)
149 TIGR01207 rmlA glucose-1-phosp 77.8 16 0.00035 35.6 9.4 99 96-206 24-122 (286)
150 cd06431 GT8_LARGE_C LARGE cata 76.2 45 0.00098 32.3 12.0 100 92-197 2-113 (280)
151 PRK14352 glmU bifunctional N-a 76.0 35 0.00076 36.0 12.2 101 96-209 26-127 (482)
152 cd06428 M1P_guanylylT_A_like_N 75.9 26 0.00056 33.3 10.3 108 89-208 20-128 (257)
153 COG2068 Uncharacterized MobA-r 75.6 46 0.00099 30.2 10.8 97 100-209 28-125 (199)
154 COG1209 RfbA dTDP-glucose pyro 75.1 22 0.00047 33.9 8.9 198 96-313 25-228 (286)
155 PF11051 Mannosyl_trans3: Mann 74.7 26 0.00055 33.8 9.8 19 181-199 90-110 (271)
156 PRK14360 glmU bifunctional N-a 74.1 36 0.00079 35.4 11.6 99 96-209 23-122 (450)
157 PLN03133 beta-1,3-galactosyltr 73.8 1.4E+02 0.0031 32.5 16.3 107 181-302 475-594 (636)
158 cd02524 G1P_cytidylyltransfera 73.3 49 0.0011 31.3 11.5 37 166-206 104-141 (253)
159 PRK09382 ispDF bifunctional 2- 72.7 30 0.00066 35.1 10.1 91 101-207 31-122 (378)
160 PRK14358 glmU bifunctional N-a 72.5 46 0.00099 35.1 11.9 99 96-210 29-128 (481)
161 cd02518 GT2_SpsF SpsF is a gly 70.6 42 0.00092 31.2 10.2 96 96-208 18-115 (233)
162 cd02523 PC_cytidylyltransferas 68.8 32 0.00069 31.9 8.9 96 90-204 19-115 (229)
163 PRK14354 glmU bifunctional N-a 68.8 54 0.0012 34.2 11.5 95 96-207 24-119 (458)
164 cd02509 GDP-M1P_Guanylyltransf 68.7 74 0.0016 30.6 11.6 94 90-195 22-116 (274)
165 PRK05450 3-deoxy-manno-octulos 68.6 86 0.0019 29.3 11.9 97 97-209 22-119 (245)
166 PRK00155 ispD 2-C-methyl-D-ery 67.8 73 0.0016 29.5 11.1 95 101-209 29-124 (227)
167 cd02538 G1P_TT_short G1P_TT_sh 67.3 1.1E+02 0.0024 28.6 12.8 103 90-206 21-123 (240)
168 PRK14356 glmU bifunctional N-a 66.6 70 0.0015 33.3 11.8 101 97-213 28-129 (456)
169 KOG1022 Acetylglucosaminyltran 66.2 21 0.00045 37.1 7.1 109 88-211 440-549 (691)
170 KOG0916 1,3-beta-glucan syntha 65.8 42 0.0009 39.2 9.9 131 165-301 1051-1195(1679)
171 cd06426 NTP_transferase_like_2 64.6 55 0.0012 30.0 9.6 98 96-208 23-120 (220)
172 PF03360 Glyco_transf_43: Glyc 64.5 12 0.00027 34.2 4.9 36 167-202 59-98 (207)
173 TIGR02623 G1P_cyt_trans glucos 64.4 1E+02 0.0022 29.2 11.5 144 164-326 103-247 (254)
174 TIGR03552 F420_cofC 2-phospho- 63.1 1.1E+02 0.0023 27.6 11.0 52 153-207 65-117 (195)
175 cd04198 eIF-2B_gamma_N The N-t 63.1 75 0.0016 29.2 10.1 99 96-208 25-126 (214)
176 KOG3917 Beta-1,4-galactosyltra 62.3 25 0.00054 32.2 6.2 148 88-298 71-225 (310)
177 PRK14357 glmU bifunctional N-a 62.0 96 0.0021 32.2 11.8 94 96-208 22-116 (448)
178 PF01128 IspD: 2-C-methyl-D-er 61.9 1E+02 0.0022 28.7 10.5 168 101-304 26-201 (221)
179 PF03213 Pox_P35: Poxvirus P35 61.9 1.6E+02 0.0035 28.7 12.0 44 180-224 117-161 (325)
180 PF01697 Glyco_transf_92: Glyc 61.5 94 0.002 29.8 11.0 114 93-216 3-144 (285)
181 PRK09451 glmU bifunctional N-a 61.1 1.1E+02 0.0024 31.9 12.1 94 96-206 27-121 (456)
182 PLN02728 2-C-methyl-D-erythrit 60.7 97 0.0021 29.5 10.5 94 103-209 52-146 (252)
183 cd06430 GT8_like_2 GT8_like_2 58.3 1.9E+02 0.0041 28.4 12.5 118 93-215 3-131 (304)
184 TIGR00453 ispD 2-C-methyl-D-er 57.6 1.1E+02 0.0024 28.0 10.2 94 101-209 25-119 (217)
185 PF02348 CTP_transf_3: Cytidyl 57.1 93 0.002 28.4 9.7 93 102-211 23-119 (217)
186 PF10138 vWA-TerF-like: vWA fo 56.3 1.1E+02 0.0023 28.0 9.2 101 101-206 84-187 (200)
187 cd00505 Glyco_transf_8 Members 55.9 1.6E+02 0.0034 27.7 11.1 113 95-215 3-128 (246)
188 KOG2791 N-acetylglucosaminyltr 54.3 75 0.0016 31.2 8.2 50 91-141 117-166 (455)
189 PHA02688 ORF059 IMV protein VP 53.1 1.4E+02 0.0031 29.1 9.9 43 181-224 116-159 (323)
190 TIGR01208 rmlA_long glucose-1- 53.1 98 0.0021 31.0 9.7 98 96-206 24-121 (353)
191 COG1208 GCD1 Nucleoside-diphos 52.4 1.2E+02 0.0026 30.6 10.1 100 96-209 26-125 (358)
192 cd02541 UGPase_prokaryotic Pro 50.8 1.5E+02 0.0032 28.2 10.3 104 96-207 25-146 (267)
193 TIGR01105 galF UTP-glucose-1-p 49.5 2.1E+02 0.0046 27.9 11.1 108 89-207 23-155 (297)
194 PRK14489 putative bifunctional 49.4 1.1E+02 0.0025 30.8 9.5 40 165-207 79-119 (366)
195 TIGR02584 cas_NE0113 CRISPR-as 46.3 2E+02 0.0044 26.3 9.3 41 95-135 1-44 (209)
196 PLN03193 beta-1,3-galactosyltr 45.8 3.5E+02 0.0076 27.7 17.5 117 181-310 236-358 (408)
197 PF02485 Branch: Core-2/I-Bran 45.7 88 0.0019 29.3 7.6 104 93-204 1-113 (244)
198 PRK15171 lipopolysaccharide 1, 45.6 2.8E+02 0.006 27.7 11.3 118 91-215 24-153 (334)
199 KOG2264 Exostosin EXT1L [Signa 44.5 60 0.0013 34.0 6.3 93 92-199 650-742 (907)
200 COG0746 MobA Molybdopterin-gua 43.9 2.5E+02 0.0054 25.4 9.8 90 100-210 26-116 (192)
201 TIGR00454 conserved hypothetic 42.2 2E+02 0.0043 25.7 9.0 96 97-210 22-118 (183)
202 PF04724 Glyco_transf_17: Glyc 42.1 3.8E+02 0.0082 27.0 13.3 39 179-218 176-214 (356)
203 PF09837 DUF2064: Uncharacteri 42.0 1.8E+02 0.0039 24.1 8.0 61 152-218 33-94 (122)
204 KOG0799 Branching enzyme [Carb 41.8 3.4E+02 0.0074 28.2 11.6 106 92-206 104-218 (439)
205 COG1512 Beta-propeller domains 41.8 46 0.00099 32.0 4.9 46 100-147 45-90 (271)
206 TIGR01099 galU UTP-glucose-1-p 40.7 2.6E+02 0.0056 26.3 10.2 103 96-207 25-146 (260)
207 cd02507 eIF-2B_gamma_N_like Th 38.9 2E+02 0.0043 26.4 8.7 98 96-203 25-123 (216)
208 cd04197 eIF-2B_epsilon_N The N 35.9 3.4E+02 0.0074 24.7 10.2 108 89-208 20-129 (217)
209 PRK00844 glgC glucose-1-phosph 35.9 2.3E+02 0.0051 29.0 9.5 108 89-206 25-140 (407)
210 PRK14359 glmU bifunctional N-a 35.1 3.2E+02 0.0068 28.1 10.5 91 96-204 24-116 (430)
211 KOG2287 Galactosyltransferases 34.6 4.9E+02 0.011 26.1 16.9 196 91-302 95-303 (349)
212 PF07507 WavE: WavE lipopolysa 33.9 1.2E+02 0.0026 29.8 6.5 95 101-206 17-120 (311)
213 PF05212 DUF707: Protein of un 33.5 1.4E+02 0.003 28.8 6.6 209 89-315 39-258 (294)
214 KOG0070 GTP-binding ADP-ribosy 32.4 70 0.0015 28.6 4.1 40 108-147 72-111 (181)
215 TIGR02091 glgC glucose-1-phosp 31.0 1.7E+02 0.0036 29.4 7.4 103 96-206 23-134 (361)
216 cd04194 GT8_A4GalT_like A4GalT 29.6 4.7E+02 0.01 24.4 11.1 88 104-197 13-111 (248)
217 PRK14490 putative bifunctional 29.2 4.1E+02 0.009 26.8 9.8 86 101-206 198-284 (369)
218 COG3181 Uncharacterized protei 29.0 3.4E+02 0.0073 26.8 8.6 111 92-211 29-149 (319)
219 PF03314 DUF273: Protein of un 28.8 42 0.0009 30.7 2.2 35 180-218 40-75 (222)
220 PRK00576 molybdopterin-guanine 28.4 4.1E+02 0.0088 23.3 9.3 43 165-207 58-101 (178)
221 COG1099 Predicted metal-depend 27.8 4.6E+02 0.01 24.5 8.5 100 92-207 129-230 (254)
222 PRK05293 glgC glucose-1-phosph 27.0 1.9E+02 0.0041 29.2 7.1 110 89-206 23-140 (380)
223 COG1861 SpsF Spore coat polysa 26.6 5.3E+02 0.011 24.0 9.5 95 96-206 22-117 (241)
224 PF01501 Glyco_transf_8: Glyco 26.1 1.4E+02 0.0031 27.6 5.6 18 180-197 97-114 (250)
225 KOG1971 Lysyl hydroxylase [Pos 25.5 77 0.0017 32.1 3.6 93 103-206 105-200 (415)
226 PF15609 PRTase_2: Phosphoribo 23.7 3E+02 0.0066 24.8 6.6 40 123-164 123-163 (191)
227 PF09623 Cas_NE0113: CRISPR-as 23.1 2.9E+02 0.0062 25.8 6.6 33 94-126 3-36 (224)
228 PRK00725 glgC glucose-1-phosph 21.5 9E+02 0.019 24.9 11.0 108 89-206 35-152 (425)
229 PF11181 YflT: Heat induced st 21.3 1.8E+02 0.0039 23.2 4.4 30 96-125 2-31 (103)
230 TIGR01479 GMP_PMI mannose-1-ph 21.0 5.1E+02 0.011 27.2 8.9 99 96-205 26-128 (468)
231 COG4097 Predicted ferric reduc 20.4 2.2E+02 0.0049 28.6 5.5 44 89-135 342-386 (438)
232 PHA01631 hypothetical protein 20.4 71 0.0015 27.9 1.9 46 151-196 39-86 (176)
No 1
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=6.6e-48 Score=413.17 Aligned_cols=344 Identities=23% Similarity=0.377 Sum_probs=249.6
Q ss_pred CCCCCcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcC-CCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC
Q 009761 87 NSAYPMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDD-STDPTIKDLVELECQRWASKGINIKYEIRDSRNG 164 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~-s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 164 (526)
.+..|+|||+||+|||+ +.+++++.++++||||+++++|+|+|| |+|++ ++++++ .+++|+.++++++
T Consensus 256 ~~~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t-~~la~~---------~~v~yI~R~~n~~ 325 (852)
T PRK11498 256 MSLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF-RQFAQE---------VGVKYIARPTHEH 325 (852)
T ss_pred cCCCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH-HHHHHH---------CCcEEEEeCCCCc
Confidence 45679999999999999 678999999999999988777777766 55555 335432 4688888888888
Q ss_pred CCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCc--HHHHHHHH--hhhhh
Q 009761 165 YKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADEC--LMTRMQEM--SLDYH 240 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~--~~~~~~~~--~~~~~ 240 (526)
+|++|+|.|++.+ ++|||+++|||++++||+|++++..|++||++++||+++.+.|.+.- ...+.... +-+.+
T Consensus 326 gKAGnLN~aL~~a---~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~f 402 (852)
T PRK11498 326 AKAGNINNALKYA---KGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLF 402 (852)
T ss_pred chHHHHHHHHHhC---CCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHH
Confidence 9999999999999 99999999999999999999999988899999999999888775421 11111111 11112
Q ss_pred hhhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHH
Q 009761 241 FTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQ 320 (526)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr 320 (526)
+...+...+... ...++|+++++||++++++|||++++++||.+++.+++++||++.|++++.+.++.|+|++++.+||
T Consensus 403 y~~iq~g~~~~~-a~~~~Gs~aviRReaLeeVGGfd~~titED~dlslRL~~~Gyrv~yl~~~~a~glaPesl~~~~~QR 481 (852)
T PRK11498 403 YGLVQDGNDMWD-ATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQR 481 (852)
T ss_pred HHHHHhHHHhhc-ccccccceeeeEHHHHHHhcCCCCCccCccHHHHHHHHHcCCEEEEEeccceeEECCCCHHHHHHHH
Confidence 222232222222 2336799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcchHHHHHhhcccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-----chhhHHHHHHH
Q 009761 321 HRWSCGPANLFKKMVGEIMRTKKVTLWKKLYVIYSFFFVRKVVAHIVTFVFYCVLLPATVLFPE-----VEVPKWGAVYI 395 (526)
Q Consensus 321 ~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~ 395 (526)
.||++|.+|+++++ .. +..+++++.+++++..+.+.+ +..+..+ ..++.|+.+++.. .....+..+.+
T Consensus 482 ~RWarG~lQi~r~~-~p-l~~~gL~~~qRl~y~~~~l~~---l~g~~~l--~~l~~Pl~~l~~gi~~i~a~~~~i~~y~l 554 (852)
T PRK11498 482 IRWARGMVQIFRLD-NP-LTGKGLKLAQRLCYANAMLHF---LSGIPRL--IFLTAPLAFLLLHAYIIYAPALMIALFVL 554 (852)
T ss_pred HHHHHHHHHHHHHh-Ch-hccCCCCHHHHHHHHHHHHHH---HHHHHHH--HHHHHHHHHHHhCChheeCChHHHHHHHH
Confidence 99999999999886 33 345679999999877554431 1122111 1233454443211 12222334455
Q ss_pred HHHHHHHHHh--ccchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCcceEEecccCCc
Q 009761 396 PSIITLLNAV--GTPRSLHLLVFWI-LFENVMSLHRTKATFIGLLEAGRVNEWVVTEKLGDV 454 (526)
Q Consensus 396 ~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~w~~T~K~~~~ 454 (526)
|..+...... ...+. ..++|. +++..++......++.++++. ++.+|+||+|++..
T Consensus 555 P~~~~~~l~~~~~~g~~--r~~~wseiye~v~a~~l~~~~~~~ll~p-~~~~F~VTpKg~~~ 613 (852)
T PRK11498 555 PHMIHASLTNSRIQGKY--RHSFWSEIYETVLAWYIAPPTTVALFNP-HKGKFNVTAKGGLV 613 (852)
T ss_pred HHHHHHHHHHHHhcCcc--hHhHHHHHHHHHHHHHHHHHHHHHHcCc-cCCCcccCCCCccc
Confidence 5554322221 11211 223444 677777777788888888864 67799999996543
No 2
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=5.2e-47 Score=410.48 Aligned_cols=347 Identities=26% Similarity=0.412 Sum_probs=248.6
Q ss_pred CCCCCcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEE-cCCCchhH-------------HHHHHHHHHHhhccC
Q 009761 87 NSAYPMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVL-DDSTDPTI-------------KDLVELECQRWASKG 151 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~-D~s~D~t~-------------~~l~~~~~~~~~~~~ 151 (526)
++..|+|||+||+|||+ +.+++|++++.+||||+++++|+|+ |+|+|+|. .+..++.+++
T Consensus 127 ~~~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~----- 201 (713)
T TIGR03030 127 PEEWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRK----- 201 (713)
T ss_pred cccCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHH-----
Confidence 46689999999999999 5668899999999999876655555 55788762 1122333433
Q ss_pred CcEEEEeeCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCC---cH
Q 009761 152 INIKYEIRDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADE---CL 228 (526)
Q Consensus 152 ~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~---~~ 228 (526)
.+++|+.++++.++|++|+|.|++++ ++||++++|||++++||+|++++..|++||++++||+++.+.|.+. +.
T Consensus 202 ~~v~yi~r~~n~~~KAgnLN~al~~a---~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~f~~p~~~~~nl 278 (713)
T TIGR03030 202 LGVNYITRPRNVHAKAGNINNALKHT---DGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHFFVSPDPIERNL 278 (713)
T ss_pred cCcEEEECCCCCCCChHHHHHHHHhc---CCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCeeccCCCHHhhhh
Confidence 47889988888889999999999999 9999999999999999999999999988999999999988776541 11
Q ss_pred --HHHHHHHhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEecccccc
Q 009761 229 --MTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVK 306 (526)
Q Consensus 229 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~ 306 (526)
..+... +....+...+...+..+ ...++|+++++||++++++|||++++++||++++.+++++||+++|+|++.++
T Consensus 279 ~~~~~~~~-e~~~f~~~i~~g~~~~~-~~~~~Gs~~~iRR~al~~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~~~~~ 356 (713)
T TIGR03030 279 GTFRRMPN-ENELFYGLIQDGNDFWN-AAFFCGSAAVLRREALDEIGGIAGETVTEDAETALKLHRRGWNSAYLDRPLIA 356 (713)
T ss_pred HHHHHhhh-HHHHHHHHHHHHHhhhC-CeeecCceeEEEHHHHHHcCCCCCCCcCcHHHHHHHHHHcCCeEEEecccccc
Confidence 111111 11111222222222222 23467999999999999999999999999999999999999999999999999
Q ss_pred ccCCcChHHHHHHHHhhhcchHHHHHhhcccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 009761 307 NELPSTFKAYRYQQHRWSCGPANLFKKMVGEIMRTKKVTLWKKLYVIYSFFFVRKVVAHIVTFVFYCVLLPATVLFPE-- 384 (526)
Q Consensus 307 ~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-- 384 (526)
++.|+|++++.+||.||++|.+|+++.. +.+..+++++.+|++++.+.+.+ +.++... ..++.|+.+++..
T Consensus 357 g~~p~sl~~~~~Qr~RWa~G~~qi~~~~--~pl~~~gl~~~qrl~y~~~~~~~---~~~~~~~--~~~~~P~~~l~~~~~ 429 (713)
T TIGR03030 357 GLAPETLSGHIGQRIRWAQGMMQIFRLD--NPLLKRGLSFPQRLCYLNAMLFW---FFPLPRV--IFLTAPLAYLFFGLN 429 (713)
T ss_pred ccCCCCHHHHHHHHHHHhcChHHHHhhh--CccccCCCCHHHHHHHHHHHHHH---HHHHHHH--HHHHHHHHHHHhCCc
Confidence 9999999999999999999999998764 33344678999999877654331 1122111 1233444443211
Q ss_pred ---chhhHHHHHHHHHHHHHHHH--hccchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCcceEEecccCC
Q 009761 385 ---VEVPKWGAVYIPSIITLLNA--VGTPRSLHLLVFWI-LFENVMSLHRTKATFIGLLEAGRVNEWVVTEKLGD 453 (526)
Q Consensus 385 ---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~w~~T~K~~~ 453 (526)
.....+..+++|..+..... ....+. ..++|. .++..+++....+++.+++.. ++.+|+||||++.
T Consensus 430 ~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~F~VT~Kg~~ 501 (713)
T TIGR03030 430 IFVASALEILAYALPHMLHSLLTNSYLFGRV--RWPFWSEVYETVLAVYLLPPVLVTLLNP-KKPKFNVTPKGEL 501 (713)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHcCCe--ecchHHHHHHHHHHHHHHHHHHHHHhCc-CCCCceecCCCcc
Confidence 11222334445544433221 111111 122333 677788888888999998864 5668999999664
No 3
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.4e-43 Score=366.20 Aligned_cols=245 Identities=25% Similarity=0.361 Sum_probs=206.9
Q ss_pred CCCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCC
Q 009761 87 NSAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYK 166 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K 166 (526)
.++.|+|||+||+|||++.+++|++|+.+|+||+.+ +|+|+|+|+|+|.+ .+++..++ ..++++++.+++ +||
T Consensus 50 ~~~~p~vsViIp~yne~~~i~~~l~sl~~q~yp~~e-iiVvdD~s~d~t~~-~l~~~~~~----~~~v~~i~~~~n-~Gk 122 (420)
T PRK11204 50 LKEYPGVSILVPCYNEGENVEETISHLLALRYPNYE-VIAINDGSSDNTGE-ILDRLAAQ----IPRLRVIHLAEN-QGK 122 (420)
T ss_pred cCCCCCEEEEEecCCCHHHHHHHHHHHHhCCCCCeE-EEEEECCCCccHHH-HHHHHHHh----CCcEEEEEcCCC-CCH
Confidence 456789999999999999999999999999999644 34466778888876 55555554 356777754544 459
Q ss_pred ccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhh
Q 009761 167 AGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQE 246 (526)
Q Consensus 167 ~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (526)
++|+|.|++.+ ++|+++++|+|+.++||+++++++.++++|++++|+|.....|. .++..+.+..++...+...+.
T Consensus 123 a~aln~g~~~a---~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (420)
T PRK11204 123 ANALNTGAAAA---RSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNR-STLLGRIQVGEFSSIIGLIKR 198 (420)
T ss_pred HHHHHHHHHHc---CCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccc-hhHHHHHHHHHHHHhhhHHHH
Confidence 99999999999 99999999999999999999999999889999999999887765 567777776665554444444
Q ss_pred ccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcc
Q 009761 247 VGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCG 326 (526)
Q Consensus 247 ~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 326 (526)
..+..+...+.+|+++++||++++++|||+++..+||.|++.|++++||++.|.|++.++++.|+|++++.+||+||++|
T Consensus 199 ~~~~~~~~~~~~G~~~~~rr~~l~~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p~t~~~~~~Qr~RW~~G 278 (420)
T PRK11204 199 AQRVYGRVFTVSGVITAFRKSALHEVGYWSTDMITEDIDISWKLQLRGWDIRYEPRALCWILMPETLKGLWKQRLRWAQG 278 (420)
T ss_pred HHHHhCCceEecceeeeeeHHHHHHhCCCCCCcccchHHHHHHHHHcCCeEEeccccEEEeECcccHHHHHHHHHHHhcC
Confidence 34444555667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhcccccccC
Q 009761 327 PANLFKKMVGEIMRTK 342 (526)
Q Consensus 327 ~~~~~~~~~~~~~~~~ 342 (526)
.+|.++++.+..++.+
T Consensus 279 ~~~~l~~~~~~~~~~~ 294 (420)
T PRK11204 279 GAEVLLKNFRRLWRWK 294 (420)
T ss_pred HHHHHHHHHHHhcCcc
Confidence 9999999877666543
No 4
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.6e-43 Score=366.38 Aligned_cols=243 Identities=21% Similarity=0.284 Sum_probs=206.7
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
+..|+|||+||+|||++.+++|++|+++|+||+.+ +|+|+|+|+|+|.+ ..++..++ ..++++++.+++ +||+
T Consensus 72 ~~~p~vsViIP~yNE~~~i~~~l~sll~q~yp~~e-IivVdDgs~D~t~~-~~~~~~~~----~~~v~vv~~~~n-~Gka 144 (444)
T PRK14583 72 KGHPLVSILVPCFNEGLNARETIHAALAQTYTNIE-VIAINDGSSDDTAQ-VLDALLAE----DPRLRVIHLAHN-QGKA 144 (444)
T ss_pred CCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCCCeE-EEEEECCCCccHHH-HHHHHHHh----CCCEEEEEeCCC-CCHH
Confidence 45799999999999999999999999999999744 44467778888876 55555444 356777755544 4599
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhc
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEV 247 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (526)
+|+|.|++.+ ++|+++++|||++++||++++++..++++|++++||+.....+. .++..+.+..++...+...+..
T Consensus 145 ~AlN~gl~~a---~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~ 220 (444)
T PRK14583 145 IALRMGAAAA---RSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTR-STLIGRVQVGEFSSIIGLIKRT 220 (444)
T ss_pred HHHHHHHHhC---CCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCC-CcchhhHHHHHHHHHHHHHHHH
Confidence 9999999999 99999999999999999999999999889999999999887665 5677787766666555544444
Q ss_pred cccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcch
Q 009761 248 GSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCGP 327 (526)
Q Consensus 248 ~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~ 327 (526)
....+..+..+|+++++||++++++|||+++.++||.|++.|++++||++.|.|++.++++.|+|++++.+||.||++|.
T Consensus 221 ~~~~g~~~~~sG~~~~~rr~al~~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~a~~~~~~p~t~~~~~~Qr~RW~~G~ 300 (444)
T PRK14583 221 QRVYGQVFTVSGVVAAFRRRALADVGYWSPDMITEDIDISWKLQLKHWSVFFEPRGLCWILMPETLRGLWKQRLRWAQGG 300 (444)
T ss_pred HHHhCCceEecCceeEEEHHHHHHcCCCCCCcccccHHHHHHHHHcCCeEEEeeccEEeeeCCCCHHHHHHHHHHHhCcH
Confidence 44555666678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccc
Q 009761 328 ANLFKKMVGEIMRT 341 (526)
Q Consensus 328 ~~~~~~~~~~~~~~ 341 (526)
.|++.++.+..++.
T Consensus 301 ~~~~~~~~~~~~~~ 314 (444)
T PRK14583 301 AEVFLKNMFKLWRW 314 (444)
T ss_pred HHHHHHHHHHHhCc
Confidence 99999887776643
No 5
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=5.1e-41 Score=346.57 Aligned_cols=243 Identities=17% Similarity=0.216 Sum_probs=189.6
Q ss_pred CCCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEE-EEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCC
Q 009761 87 NSAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQ-VLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGY 165 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 165 (526)
+++.|+|||+||+|||++.+.+|++|+.+|+||+++++|+ |+|+|+|+|.+ +.++..++ ..++.+...+ +++|
T Consensus 45 ~~~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~-il~~~~~~----~~~v~v~~~~-~~~G 118 (439)
T TIGR03111 45 IGKLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQ-VFCRAQNE----FPGLSLRYMN-SDQG 118 (439)
T ss_pred cCCCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHH-HHHHHHHh----CCCeEEEEeC-CCCC
Confidence 3567999999999999999999999999999998765444 55668888876 55555444 2455554333 3467
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCC----Cc----HHHHHHHHhh
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNAD----EC----LMTRMQEMSL 237 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~----~~----~~~~~~~~~~ 237 (526)
|++|+|.|++.+ ++|||+++|+|++++||+++++++.|++||++++++|........ .. ...+.+..++
T Consensus 119 ka~AlN~gl~~s---~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y 195 (439)
T TIGR03111 119 KAKALNAAIYNS---IGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEY 195 (439)
T ss_pred HHHHHHHHHHHc---cCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHH
Confidence 999999999999 999999999999999999999999998899999999887532110 11 1112111222
Q ss_pred hhhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHH-hCCCeEEEeccccccccCCcChHHH
Q 009761 238 DYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRAS-LKGWKFVYVGDLKVKNELPSTFKAY 316 (526)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~-~~G~~~~~~~~~~~~~~~p~t~~~~ 316 (526)
...+...+...+..+.....+|+++++||++++++|||++++++||+|++.+++ ..|+++.++|++.++++.|+|++++
T Consensus 196 ~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~p~t~~~~ 275 (439)
T TIGR03111 196 AQAFLAGRNFESQVNSLFTLSGAFSAFRRETILKTQLYNSETVGEDTDMTFQIRELLDGKVYLCENAIFYVDPIDGLNKL 275 (439)
T ss_pred HHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCcCccHHHHHHHHHhcCCeEEECCCCEEEEECCcCHHHH
Confidence 222222222233344555678999999999999999999999999999999997 4699999999999999999999999
Q ss_pred HHHHHhhhcchHHHHHhhcccc
Q 009761 317 RYQQHRWSCGPANLFKKMVGEI 338 (526)
Q Consensus 317 ~~Qr~RW~~G~~~~~~~~~~~~ 338 (526)
.+||.||.+|.+|+++++.+..
T Consensus 276 ~~QR~RW~rG~~qv~~~~~~~~ 297 (439)
T TIGR03111 276 YTQRQRWQRGELEVSHMFFESA 297 (439)
T ss_pred HHHHHHHhccHHHHHHHHHhhh
Confidence 9999999999999998765433
No 6
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=2e-39 Score=343.96 Aligned_cols=259 Identities=19% Similarity=0.205 Sum_probs=205.8
Q ss_pred CCCCCcEEEEEecCCChH-----HHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHH----HHHHHHhhccCCcEEEE
Q 009761 87 NSAYPMVLVQIPMYNEKE-----VYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLV----ELECQRWASKGINIKYE 157 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~-----~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~----~~~~~~~~~~~~~v~~~ 157 (526)
.+..|+|+|+||+|||+. .++.+++|+.+|+|++ +++++|+||++|+...... ++++++++. +.++.|.
T Consensus 120 ~~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~-~~~i~yr 197 (691)
T PRK05454 120 PPPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAAEEAAWLELRAELGG-EGRIFYR 197 (691)
T ss_pred CCCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCcEEEE
Confidence 456789999999999994 5899999999999974 4666777777776654332 234555432 4689999
Q ss_pred eeCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhh
Q 009761 158 IRDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSL 237 (526)
Q Consensus 158 ~~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~ 237 (526)
+|.++.+.|+||+|.+++.. ..++||++++|||+++++|++.+++..|++||++|+||+++...|. ++++++.|++..
T Consensus 198 ~R~~n~~~KaGNl~~~~~~~-~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~-~slfaR~qqf~~ 275 (691)
T PRK05454 198 RRRRNVGRKAGNIADFCRRW-GGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAVGA-DTLFARLQQFAT 275 (691)
T ss_pred ECCcCCCccHHHHHHHHHhc-CCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCcCC-CCHHHHHHHHHH
Confidence 88888889999999999983 1278999999999999999999999999889999999999988887 589999887643
Q ss_pred hhhhhhhhhccc-cCCCcccccccceeeeHHHHHHcC---------CCCCCCccchHHHHHHHHhCCCeEEEecc-cccc
Q 009761 238 DYHFTVEQEVGS-STYAFFGFNGTAGVWRISALNEAG---------GWKDRTTVEDMDLAVRASLKGWKFVYVGD-LKVK 306 (526)
Q Consensus 238 ~~~~~~~~~~~~-~~~~~~~~~G~~~~~Rr~~l~~~g---------g~~~~~~~ED~~l~~rl~~~G~~~~~~~~-~~~~ 306 (526)
+........+.+ ..++...+.|+|.++|++++.++| +|+++.++||++++.+++++||+++|+|+ ..++
T Consensus 276 ~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~~~~~ 355 (691)
T PRK05454 276 RVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDLPGSY 355 (691)
T ss_pred HHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcccccc
Confidence 332222111111 111233477999999999998864 56667899999999999999999999999 5689
Q ss_pred ccCCcChHHHHHHHHhhhcchHHHHHhhcccccccCCCChhHHHHHHH
Q 009761 307 NELPSTFKAYRYQQHRWSCGPANLFKKMVGEIMRTKKVTLWKKLYVIY 354 (526)
Q Consensus 307 ~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (526)
++.|+|++++.+||.||++|++|.++.. ..+++++.+|++++.
T Consensus 356 ee~P~tl~~~~~qr~RW~~G~lQ~l~~l-----~~~gl~~~~R~~~l~ 398 (691)
T PRK05454 356 EELPPNLLDELKRDRRWCQGNLQHLRLL-----LAKGLHPVSRLHFLT 398 (691)
T ss_pred ccCCCCHHHHHHHHHHHHhchHHHHHHH-----HhcCCCHHHHHHHHH
Confidence 9999999999999999999999988653 246688888887654
No 7
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=100.00 E-value=6.7e-41 Score=318.27 Aligned_cols=232 Identities=57% Similarity=0.982 Sum_probs=199.0
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHH
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGAL 170 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~al 170 (526)
|+|||+||+|||++.|.++|+|+.+|+||.++++|+|+|||+|+|.+ ++++..+++...+.+++++.+.+++|+|++|+
T Consensus 1 p~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~s~D~t~~-~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~ 79 (232)
T cd06437 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDSTDETVR-LAREIVEEYAAQGVNIKHVRRADRTGYKAGAL 79 (232)
T ss_pred CceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEECCCCcHHH-HHHHHHHHHhhcCCceEEEECCCCCCCchHHH
Confidence 57999999999999999999999999999877777788889999988 55555555544567788887777788899999
Q ss_pred HHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhcccc
Q 009761 171 KEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSS 250 (526)
Q Consensus 171 n~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (526)
|.|++.+ ++|||+++|+|++++||+|+++...+ ++|++++|++.....+.+.++..+.+...+.+.+...+.....
T Consensus 80 n~g~~~a---~~~~i~~~DaD~~~~~~~l~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (232)
T cd06437 80 AEGMKVA---KGEYVAIFDADFVPPPDFLQKTPPYF-ADPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSS 155 (232)
T ss_pred HHHHHhC---CCCEEEEEcCCCCCChHHHHHhhhhh-cCCCeEEEecceeeEcCCCchhhHhhhhhHHhhhhHhHhhHhh
Confidence 9999999 99999999999999999999977776 7899999999888778777888877766655544444433333
Q ss_pred CCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcch
Q 009761 251 TYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCGP 327 (526)
Q Consensus 251 ~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~ 327 (526)
.....+++|+++++||++++++|||++....||++++.|+..+||++.|.|++.++++.|.|++++.+||.||++|.
T Consensus 156 ~~~~~~~~g~~~~~rr~~~~~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 156 TGLFFNFNGTAGVWRKECIEDAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDDVVVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred cCCeEEeccchhhhhHHHHHHhCCCCCCcchhhHHHHHHHHHCCCeEEEeccceeeeeCCcCHHHHHHHHHHhccCC
Confidence 34444568999999999999999999988999999999999999999999999999999999999999999999983
No 8
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=6.2e-38 Score=321.80 Aligned_cols=242 Identities=17% Similarity=0.167 Sum_probs=180.7
Q ss_pred CCCCCcEEEEEecCCChHHHHHHHHHHH-cCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEe-eCCCCC
Q 009761 87 NSAYPMVLVQIPMYNEKEVYQLSIGAAC-GLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEI-RDSRNG 164 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~~l~~~L~sl~-~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~-~~~~~g 164 (526)
.++.|+++|+||+|||+++|.++|+|++ +++||+.+ +++++|+|+|+|.+ .+++.++++ ++++++. ..+...
T Consensus 62 ~~~~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~e-IiVv~d~ndd~T~~-~v~~l~~~~----p~v~~vv~~~~gp~ 135 (504)
T PRK14716 62 SVPEKRIAIFVPAWREADVIGRMLEHNLATLDYENYR-IFVGTYPNDPATLR-EVDRLAARY----PRVHLVIVPHDGPT 135 (504)
T ss_pred cCCCCceEEEEeccCchhHHHHHHHHHHHcCCCCCeE-EEEEECCCChhHHH-HHHHHHHHC----CCeEEEEeCCCCCC
Confidence 3458999999999999999999999965 68998643 33355678888877 666666664 3344332 222234
Q ss_pred CCccHHHHHhhhhc------ccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCc-HHHHHHHHhh
Q 009761 165 YKAGALKEGMKHSY------VKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADEC-LMTRMQEMSL 237 (526)
Q Consensus 165 ~K~~aln~gl~~a~------~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~-~~~~~~~~~~ 237 (526)
+|++|+|.|++.+. +.++|+++++|||++++||+|+.+...+ ++.++||.+....+.+.+ +.+..+..++
T Consensus 136 ~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~---~~~~~VQ~pv~~~~~~~~~~~ag~y~~ef 212 (504)
T PRK14716 136 SKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLL---PRHDFVQLPVFSLPRDWGEWVAGTYMDEF 212 (504)
T ss_pred CHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhc---CCCCEEecceeccCCchhHHHHHHHHHHH
Confidence 69999999997641 1234999999999999999999876655 445788887665544333 3344333344
Q ss_pred hhhhhhhhhccccCCCcccccccceeeeHHHHHHc-----CC-CCCCCccchHHHHHHHHhCCCeEEEeccccc------
Q 009761 238 DYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEA-----GG-WKDRTTVEDMDLAVRASLKGWKFVYVGDLKV------ 305 (526)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~-----gg-~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~------ 305 (526)
...+......+...+...+.+|+++++||++++++ |+ |++++++||+|+++|+.++|+|++|+|++.+
T Consensus 213 ~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~ 292 (504)
T PRK14716 213 AESHLKDLPVREALGGLIPSAGVGTAFSRRALERLAAERGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRP 292 (504)
T ss_pred HHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCcchHHHHHHHHHHCCCEEEEeccccccccccc
Confidence 43343344445566667778899999999999997 33 9999999999999999999999999999853
Q ss_pred ---------cccCCcChHHHHHHHHhhhcch-HHHHHhhccc
Q 009761 306 ---------KNELPSTFKAYRYQQHRWSCGP-ANLFKKMVGE 337 (526)
Q Consensus 306 ---------~~~~p~t~~~~~~Qr~RW~~G~-~~~~~~~~~~ 337 (526)
+++.|+|++++.+||.||.+|. +|.+++..+.
T Consensus 293 ~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~ 334 (504)
T PRK14716 293 DRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWK 334 (504)
T ss_pred ccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCC
Confidence 3678999999999999999995 7988765443
No 9
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=3.2e-36 Score=312.84 Aligned_cols=305 Identities=20% Similarity=0.297 Sum_probs=226.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccc--cCCCCCCcEEEEEec---CCCh-HHHHHHHHHHHcCCC
Q 009761 45 LSIMLFVERVYMGIVIVLLKLFGRKPEKRYKWEAIKDDVE--LGNSAYPMVLVQIPM---YNEK-EVYQLSIGAACGLSW 118 (526)
Q Consensus 45 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~VsViIp~---yne~-~~l~~~L~sl~~q~y 118 (526)
++++++++.+.+++.+++....++.|.++. +.++... ...+++|.|.|.|++ +.|+ -...+|+-|+++.||
T Consensus 56 ~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~---~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dy 132 (734)
T PLN02893 56 ITLLLLLADIVLAFMWATTQAFRMCPVHRR---VFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDY 132 (734)
T ss_pred HHHHHHHHHHHHHHHHHHccCccccccccc---cCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhcc
Confidence 456666777777888777777888777653 2332221 124579999999999 6777 478899999999999
Q ss_pred CCCceEEEEEcC-CCchhHHHHHHHH---------HH-------------------------------------------
Q 009761 119 PSDRITIQVLDD-STDPTIKDLVELE---------CQ------------------------------------------- 145 (526)
Q Consensus 119 p~~~~~I~V~D~-s~D~t~~~l~~~~---------~~------------------------------------------- 145 (526)
|.+++-++|.|| ++.-|.+.+.|.. |+
T Consensus 133 p~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFCrk~~ie~R~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~ 212 (734)
T PLN02893 133 PTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVE 212 (734)
T ss_pred CccceEEEEecCCccHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988 4444444444410 00
Q ss_pred ------Hh-------------hc--------------------------cCCcEEEEeeCCCC----CCCccHHHHHhhh
Q 009761 146 ------RW-------------AS--------------------------KGINIKYEIRDSRN----GYKAGALKEGMKH 176 (526)
Q Consensus 146 ------~~-------------~~--------------------------~~~~v~~~~~~~~~----g~K~~aln~gl~~ 176 (526)
++ .. .-++++|++|+++. +.||||+|.+++.
T Consensus 213 ~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrv 292 (734)
T PLN02893 213 RGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRV 292 (734)
T ss_pred cCcCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHh
Confidence 00 00 01237788888874 6899999999997
Q ss_pred hcc-cCCcEEEEecCCCCC-ChHHHHHHHhhhhcCC----CEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhcccc
Q 009761 177 SYV-KQCDYVAIFDADFEP-EPDFLWRTIPFLVHNP----DIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSS 250 (526)
Q Consensus 177 a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (526)
+.. .++|+|+++|+|..+ +|+++++.+.+| .|| ++++||.++++.|.+++- ....+....+...+.+.++
T Consensus 293 S~~~TngpfIl~lDcD~y~n~p~~l~~amcff-~Dp~~~~~vafVQfPQ~F~~i~~~D---~y~~~~~vff~~~~~glDG 368 (734)
T PLN02893 293 SATMTNAPIILTLDCDMYSNDPQTPLRALCYL-LDPSMDPKLGYVQFPQIFHGINKND---IYAGELKRLFQINMIGMDG 368 (734)
T ss_pred hcccCCCCEEEEecCCcCCCchhHHHHHHHHh-cCCCcCCceEEEeCcccccCCCcCC---CCcchhHHHHHHHhhcccc
Confidence 432 489999999999885 799999999998 465 799999999988765441 1122233445566666666
Q ss_pred CCCcccccccceeeeHHHHHH------------------------------------------------cCCCCCCCccc
Q 009761 251 TYAFFGFNGTAGVWRISALNE------------------------------------------------AGGWKDRTTVE 282 (526)
Q Consensus 251 ~~~~~~~~G~~~~~Rr~~l~~------------------------------------------------~gg~~~~~~~E 282 (526)
.++.. +.|+++++||+++.. .+||..++++|
T Consensus 369 ~~gp~-y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtE 447 (734)
T PLN02893 369 LAGPN-YVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVE 447 (734)
T ss_pred cCCce-eeccceEEEHHHhcCCCccccchhhhhcccccccccccchHHHHHHhhhccccccccCCccccccceEeccccc
Confidence 66654 779999999999931 13677888999
Q ss_pred hHHHHHHHHhCCCeEEEecc--ccccccCCcChHHHHHHHHhhhcchHHHHHhhccccc-ccCCCChhHHHHHHHHHH
Q 009761 283 DMDLAVRASLKGWKFVYVGD--LKVKNELPSTFKAYRYQQHRWSCGPANLFKKMVGEIM-RTKKVTLWKKLYVIYSFF 357 (526)
Q Consensus 283 D~~l~~rl~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 357 (526)
|+.++++++.+|||.+|++. ....+..|+|+.++++||.||+.|.+|++......++ ..+++++.|++.++...+
T Consensus 448 D~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~ 525 (734)
T PLN02893 448 DYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAF 525 (734)
T ss_pred cHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHH
Confidence 99999999999999999863 3457999999999999999999999999654334444 347899999999876433
No 10
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.1e-36 Score=317.28 Aligned_cols=236 Identities=32% Similarity=0.477 Sum_probs=200.5
Q ss_pred CCcEEEEEecCCChH-HHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCcc
Q 009761 90 YPMVLVQIPMYNEKE-VYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAG 168 (526)
Q Consensus 90 ~P~VsViIp~yne~~-~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~ 168 (526)
.|+|+|+||+|||++ +++++++|+.+||||+.++ ++|+|+++|++.+ .+++..+++. .++++.+.+++++||++
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~ev-ivv~d~~~d~~~~-~~~~~~~~~~---~~~~~~~~~~~~~gK~~ 127 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEV-IVVDDGSTDETYE-ILEELGAEYG---PNFRVIYPEKKNGGKAG 127 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCCceE-EEECCCCChhHHH-HHHHHHhhcC---cceEEEeccccCccchH
Confidence 599999999999997 9999999999999998443 3366778888877 6666655541 34444422356777999
Q ss_pred HHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCC--CcHHHHHHHHhhhhhhhhhhh
Q 009761 169 ALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNAD--ECLMTRMQEMSLDYHFTVEQE 246 (526)
Q Consensus 169 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 246 (526)
|+|.|++.+ ++|+|+++|||++++||+|.++++.| ++++++++++.....+.. .+++++.+..++...+.....
T Consensus 128 al~~~l~~~---~~d~V~~~DaD~~~~~d~l~~~~~~f-~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 203 (439)
T COG1215 128 ALNNGLKRA---KGDVVVILDADTVPEPDALRELVSPF-EDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLR 203 (439)
T ss_pred HHHHHHhhc---CCCEEEEEcCCCCCChhHHHHHHhhh-cCCCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhh
Confidence 999999999 99999999999999999999999999 566666666666666654 678888888888877766666
Q ss_pred ccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcc
Q 009761 247 VGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCG 326 (526)
Q Consensus 247 ~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 326 (526)
.....+....++|++.++||++++++|||++++++||.+++.+++.+||++.|++++.++++.|+|++++.+||.||++|
T Consensus 204 ~~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~g 283 (439)
T COG1215 204 AASKGGLISFLSGSSSAFRRSALEEVGGWLEDTITEDADLTLRLHLRGYRVVYVPEAIVWTEAPETLKELWRQRLRWARG 283 (439)
T ss_pred hhhhcCCeEEEcceeeeEEHHHHHHhCCCCCCceeccHHHHHHHHHCCCeEEEeecceEeeeCcccHHHHHHHHHHHHcc
Confidence 66666667778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhh
Q 009761 327 PANLFKKM 334 (526)
Q Consensus 327 ~~~~~~~~ 334 (526)
.+|.+..+
T Consensus 284 ~~~~~~~~ 291 (439)
T COG1215 284 GLQVLLLH 291 (439)
T ss_pred cceeeehh
Confidence 99987654
No 11
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=100.00 E-value=3.7e-37 Score=294.18 Aligned_cols=237 Identities=23% Similarity=0.351 Sum_probs=187.6
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEE-EEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccH
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQ-VLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGA 169 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~a 169 (526)
|.|||+||+|||++.+.++|+|+.+|+||++.++|+ |+|+|+|+|.+ ++++.... ...++++. ..+.+.||+.|
T Consensus 1 p~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~-i~~~~~~~---~~~~i~~~-~~~~~~G~~~a 75 (241)
T cd06427 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIA-AARALRLP---SIFRVVVV-PPSQPRTKPKA 75 (241)
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHH-HHHHhccC---CCeeEEEe-cCCCCCchHHH
Confidence 679999999999999999999999999997655454 56778888877 44443211 12344444 33344569999
Q ss_pred HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcC-CCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhcc
Q 009761 170 LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHN-PDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVG 248 (526)
Q Consensus 170 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~-~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (526)
+|.|++.+ +||||+++|+|+.++||++.+++..++++ +++++++++....+...++..+.....+...+.......
T Consensus 76 ~n~g~~~a---~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (241)
T cd06427 76 CNYALAFA---RGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGL 152 (241)
T ss_pred HHHHHHhc---CCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999998654 899999998877776566666655444333332222222
Q ss_pred ccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcchH
Q 009761 249 SSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCGPA 328 (526)
Q Consensus 249 ~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~ 328 (526)
...+.....+|+++++||++++++|||++....||++++.|+.++|+++.++|.. ++++.|+|++.+.+||.||.+|.+
T Consensus 153 ~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~~-~~~~~~~~~~~~~~q~~Rw~~g~~ 231 (241)
T cd06427 153 ARLGLPIPLGGTSNHFRTDVLRELGGWDPFNVTEDADLGLRLARAGYRTGVLNST-TLEEANNALGNWIRQRSRWIKGYM 231 (241)
T ss_pred HhcCCeeecCCchHHhhHHHHHHcCCCCcccchhhHHHHHHHHHCCceEEEeccc-ccccCcHhHHHHHHHHHHHhccHH
Confidence 2233344467899999999999999999988899999999999999999999875 578899999999999999999999
Q ss_pred HHHHhhcc
Q 009761 329 NLFKKMVG 336 (526)
Q Consensus 329 ~~~~~~~~ 336 (526)
|+++.|.+
T Consensus 232 ~~~~~~~~ 239 (241)
T cd06427 232 QTWLVHMR 239 (241)
T ss_pred HHHHHHhh
Confidence 99987643
No 12
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=4.9e-37 Score=292.00 Aligned_cols=230 Identities=23% Similarity=0.288 Sum_probs=187.7
Q ss_pred EEEEEecCCChH-HHHHHHHHHHc----CCC-CCCceEEEEEcCCCchhHHHHH----HHHHHHhhccCCcEEEEeeCCC
Q 009761 93 VLVQIPMYNEKE-VYQLSIGAACG----LSW-PSDRITIQVLDDSTDPTIKDLV----ELECQRWASKGINIKYEIRDSR 162 (526)
Q Consensus 93 VsViIp~yne~~-~l~~~L~sl~~----q~y-p~~~~~I~V~D~s~D~t~~~l~----~~~~~~~~~~~~~v~~~~~~~~ 162 (526)
|||+||+|||+. .+.++|+++++ |+| |+ ++|+|+||++|++..... ++++++++. +.++++.+|.++
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~--~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~-~~~v~~~~r~~~ 77 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADH--FDFFILSDTRDPDIWLAEEAAWLDLCEELGA-QGRIYYRRRREN 77 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCc--eEEEEECCCCChHHHHHHHHHHHHHHHHhCC-CCcEEEEEcCCC
Confidence 699999999995 59999998875 777 44 556788998887755222 235566644 688999999999
Q ss_pred CCCCccHHHHHhhh--hcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhh
Q 009761 163 NGYKAGALKEGMKH--SYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYH 240 (526)
Q Consensus 163 ~g~K~~aln~gl~~--a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (526)
.|.|++|+|.++.. + ++|||+++|||+.++||+|.+++++|++||++++||+++...|. .++++++++.+....
T Consensus 78 ~g~Kag~l~~~~~~~~~---~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~-~~~~~~~~~~~~~~~ 153 (254)
T cd04191 78 TGRKAGNIADFCRRWGS---RYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGA-ETLFARLQQFANRLY 153 (254)
T ss_pred CCccHHHHHHHHHHhCC---CCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECC-CCHHHHHHHHHHHHH
Confidence 99999999999986 5 89999999999999999999999999779999999999999887 578999887764433
Q ss_pred hhhhhhccccC-CCcccccccceeeeHHHHHHc---------CCCCCCCccchHHHHHHHHhCCCeEEEeccccc-cccC
Q 009761 241 FTVEQEVGSST-YAFFGFNGTAGVWRISALNEA---------GGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKV-KNEL 309 (526)
Q Consensus 241 ~~~~~~~~~~~-~~~~~~~G~~~~~Rr~~l~~~---------gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~-~~~~ 309 (526)
....+...... .+...+.|+++++||++++++ |+|++++++||++++++++++||+++|.|++.. +++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~~~~~~~ 233 (254)
T cd04191 154 GPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLEGSYEEC 233 (254)
T ss_pred HHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCcceEeEC
Confidence 22222221111 222346799999999999884 456667899999999999999999999999874 7889
Q ss_pred CcChHHHHHHHHhhhcchHH
Q 009761 310 PSTFKAYRYQQHRWSCGPAN 329 (526)
Q Consensus 310 p~t~~~~~~Qr~RW~~G~~~ 329 (526)
|++++++++||.||++|++|
T Consensus 234 p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 234 PPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred CCCHHHHHHHHHHHHhhcCc
Confidence 99999999999999999876
No 13
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=100.00 E-value=2e-35 Score=299.27 Aligned_cols=231 Identities=20% Similarity=0.292 Sum_probs=177.9
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC--C
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNG--Y 165 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g--~ 165 (526)
+..|+|||+||+|||++.+++||+|+++|+||+.++ |+++|+|+|+|.+ ++++..++++ +.+++++..+++.| +
T Consensus 38 ~~~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EI-ivvdd~s~D~t~~-iv~~~~~~~p--~~~i~~v~~~~~~G~~~ 113 (373)
T TIGR03472 38 RAWPPVSVLKPLHGDEPELYENLASFCRQDYPGFQM-LFGVQDPDDPALA-VVRRLRADFP--DADIDLVIDARRHGPNR 113 (373)
T ss_pred CCCCCeEEEEECCCCChhHHHHHHHHHhcCCCCeEE-EEEeCCCCCcHHH-HHHHHHHhCC--CCceEEEECCCCCCCCh
Confidence 347899999999999999999999999999997443 3356667787766 7777666643 34566664444333 5
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhh
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQ 245 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (526)
|.+|++.+++++ ++|+++++|||++++||+|++++..+ ++|++++|++.....+ ..++..+.........+....
T Consensus 114 K~~~l~~~~~~a---~ge~i~~~DaD~~~~p~~L~~lv~~~-~~~~v~~V~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~ 188 (373)
T TIGR03472 114 KVSNLINMLPHA---RHDILVIADSDISVGPDYLRQVVAPL-ADPDVGLVTCLYRGRP-VPGFWSRLGAMGINHNFLPSV 188 (373)
T ss_pred HHHHHHHHHHhc---cCCEEEEECCCCCcChhHHHHHHHHh-cCCCcceEeccccCCC-CCCHHHHHHHHHhhhhhhHHH
Confidence 888999999998 99999999999999999999999999 6899999999754333 245666654433222221111
Q ss_pred hccccCCCcccccccceeeeHHHHHHcCCCCC--CCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhh
Q 009761 246 EVGSSTYAFFGFNGTAGVWRISALNEAGGWKD--RTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRW 323 (526)
Q Consensus 246 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~--~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW 323 (526)
......+......|+++++||++++++|||++ +.++||++++.++.++|+++.+.|++..++..++|++++++||.||
T Consensus 189 ~~~~~~~~~~~~~G~~~a~RR~~l~~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~~v~~~~~~~s~~~~~~q~~RW 268 (373)
T TIGR03472 189 MVARALGRARFCFGATMALRRATLEAIGGLAALAHHLADDYWLGELVRALGLRVVLAPVVVDTDVHETSFATLLAHELRW 268 (373)
T ss_pred HHHHhccCCccccChhhheeHHHHHHcCChHHhcccchHHHHHHHHHHHcCCeEEecchhhhcCCCccCHHHHHHHHHHH
Confidence 11111122223569999999999999999996 5578999999999999999999999888888889999999999999
Q ss_pred hcch
Q 009761 324 SCGP 327 (526)
Q Consensus 324 ~~G~ 327 (526)
.+..
T Consensus 269 ~r~~ 272 (373)
T TIGR03472 269 SRTI 272 (373)
T ss_pred Hhhh
Confidence 8763
No 14
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=100.00 E-value=4.5e-36 Score=285.88 Aligned_cols=234 Identities=27% Similarity=0.509 Sum_probs=185.8
Q ss_pred EEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHH
Q 009761 94 LVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKE 172 (526)
Q Consensus 94 sViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~ 172 (526)
||+||+|||+ +.++++|+|+.+|+||+.++ |+|+|+|+|++..+.+++.++++ +.+++++...++.|+|++|+|.
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~ei-iVvdd~s~D~t~~~~i~~~~~~~---~~~i~~i~~~~~~G~~~~a~n~ 76 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEV-IVIDNNTKDEALWKPVEAHCAQL---GERFRFFHVEPLPGAKAGALNY 76 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEE-EEEeCCCCchhHHHHHHHHHHHh---CCcEEEEEcCCCCCCchHHHHH
Confidence 6999999998 79999999999999997543 44677799998744556555553 3467777666667779999999
Q ss_pred HhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCC
Q 009761 173 GMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTY 252 (526)
Q Consensus 173 gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (526)
|++.+. .++||++++|+|++++|++|.+++..+ +++++++|+++....+...+.+.+.....+...+..........
T Consensus 77 g~~~a~-~~~d~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 153 (236)
T cd06435 77 ALERTA-PDAEIIAVIDADYQVEPDWLKRLVPIF-DDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVSRNER- 153 (236)
T ss_pred HHHhcC-CCCCEEEEEcCCCCcCHHHHHHHHHHh-cCCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHHhcccccc-
Confidence 999972 137999999999999999999999998 58999999987655554444444433332222222222111111
Q ss_pred CcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcchHHHHH
Q 009761 253 AFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCGPANLFK 332 (526)
Q Consensus 253 ~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~ 332 (526)
......|+++++||++++++|||++....||++++.|+.++||++.+.|++.+++..|.++.++.+||.||.+|.+|.++
T Consensus 154 ~~~~~~g~~~~~rr~~~~~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~~~~~~~~~~~~~~~~~q~~rw~~g~~~~~~ 233 (236)
T cd06435 154 NAIIQHGTMCLIRRSALDDVGGWDEWCITEDSELGLRMHEAGYIGVYVAQSYGHGLIPDTFEAFKKQRFRWAYGAVQILK 233 (236)
T ss_pred CceEEecceEEEEHHHHHHhCCCCCccccchHHHHHHHHHCCcEEEEcchhhccCcCcccHHHHHHHHHHHhcchhhhhh
Confidence 12235789999999999999999998899999999999999999999999999999999999999999999999999998
Q ss_pred hh
Q 009761 333 KM 334 (526)
Q Consensus 333 ~~ 334 (526)
+|
T Consensus 234 ~~ 235 (236)
T cd06435 234 KH 235 (236)
T ss_pred cc
Confidence 87
No 15
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=7.9e-34 Score=303.02 Aligned_cols=240 Identities=20% Similarity=0.193 Sum_probs=184.0
Q ss_pred CCCCCcEEEEEecCCChHHHHHHHHHHH-cCCCCCCceEEEEE-cCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC
Q 009761 87 NSAYPMVLVQIPMYNEKEVYQLSIGAAC-GLSWPSDRITIQVL-DDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNG 164 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~~l~~~L~sl~-~q~yp~~~~~I~V~-D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 164 (526)
.++.|+|||+||+|||+.++.+++++++ +||||+ ++|++. |+++|.|.+ .+++.+++++ +.++.+..++ .++
T Consensus 59 ~~~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~-~~~~l~~~~p--~~~~v~~~~~-g~~ 132 (727)
T PRK11234 59 KPDEKPLAIMVPAWNETGVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQA-DVDAVCARFP--NVHKVVCARP-GPT 132 (727)
T ss_pred cCCCCCEEEEEecCcchhhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHH-HHHHHHHHCC--CcEEEEeCCC-CCC
Confidence 4566899999999999999999999987 799998 344444 444444555 7777777752 1233333333 345
Q ss_pred CCccHHHHHhhhhcc------cCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCC-CcHHHHHHHHhh
Q 009761 165 YKAGALKEGMKHSYV------KQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNAD-ECLMTRMQEMSL 237 (526)
Q Consensus 165 ~K~~aln~gl~~a~~------~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~-~~~~~~~~~~~~ 237 (526)
||++|+|.+++.+.. .++|.+++.|||++++||+|+ +++++ .++. ++||++....+.+ .++.++.+..++
T Consensus 133 gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l-~~~~-~~VQ~p~~p~~~~~~~~~~~~~~~EF 209 (727)
T PRK11234 133 SKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR-LFNYL-VERK-DLIQIPVYPFEREWTHFTSGTYIDEF 209 (727)
T ss_pred CHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH-HHHhh-cCCC-CeEeecccCCCccHHHHHHHHHHHHH
Confidence 699999999988621 145789999999999999997 66777 4555 8999986644432 344666676777
Q ss_pred hhhhhhhhhccccCCCcccccccceee-eH--HHHHHcC---CCCCCCccchHHHHHHHHhCCCeEEEecc---------
Q 009761 238 DYHFTVEQEVGSSTYAFFGFNGTAGVW-RI--SALNEAG---GWKDRTTVEDMDLAVRASLKGWKFVYVGD--------- 302 (526)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~G~~~~~-Rr--~~l~~~g---g~~~~~~~ED~~l~~rl~~~G~~~~~~~~--------- 302 (526)
...+..........++.....|+++++ || +++.+.| +|+.++++||++++.+++.+||++.|.|.
T Consensus 210 a~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~ 289 (727)
T PRK11234 210 AELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKER 289 (727)
T ss_pred HHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHHhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccc
Confidence 766666555666666666788999999 77 5688887 69999999999999999999999999992
Q ss_pred --------------ccccccCCcChHHHHHHHHhhhcc-hHHHHHhhc
Q 009761 303 --------------LKVKNELPSTFKAYRYQQHRWSCG-PANLFKKMV 335 (526)
Q Consensus 303 --------------~~~~~~~p~t~~~~~~Qr~RW~~G-~~~~~~~~~ 335 (526)
+.++++.|.|+++..+||.||.+| .+|.++...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~~~~ 337 (727)
T PRK11234 290 EQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFKTLG 337 (727)
T ss_pred cccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHHHhC
Confidence 336788999999999999999999 588887654
No 16
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=2.4e-33 Score=295.09 Aligned_cols=241 Identities=19% Similarity=0.133 Sum_probs=184.6
Q ss_pred CCCCCcEEEEEecCCChHHHHHHHHHHH-cCCCCCCceEEEE-EcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC-CC
Q 009761 87 NSAYPMVLVQIPMYNEKEVYQLSIGAAC-GLSWPSDRITIQV-LDDSTDPTIKDLVELECQRWASKGINIKYEIRDS-RN 163 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~~l~~~L~sl~-~q~yp~~~~~I~V-~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~-~~ 163 (526)
+.+.|.+||+||+|||++++.+++++++ ++|||+. +|+| ++.++++|.+ .+++...++ ++++.++.++ .+
T Consensus 67 ~~~~~~vsIlVPa~nE~~VI~~~v~~ll~~ldYp~~--~I~v~~~~nD~~T~~-~~~~~~~~~----p~~~~v~~~~~gp 139 (703)
T PRK15489 67 ERDEQPLAIMVPAWKEYDVIAKMIENMLATLDYRRY--VIFVGTYPNDAETIT-EVERMRRRY----KRLVRVEVPHDGP 139 (703)
T ss_pred ccCCCceEEEEeCCCcHHHHHHHHHHHHhcCCCCCe--EEEEEecCCCccHHH-HHHHHhccC----CcEEEEEcCCCCC
Confidence 4567899999999999999999999986 7899974 3444 3333345555 444444443 3555554333 33
Q ss_pred CCCccHHHHHhhhhcc----cC--CcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEE-EecCCCcHHHHHHHHh
Q 009761 164 GYKAGALKEGMKHSYV----KQ--CDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWK-FVNADECLMTRMQEMS 236 (526)
Q Consensus 164 g~K~~aln~gl~~a~~----~~--~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~-~~~~~~~~~~~~~~~~ 236 (526)
.||+.|+|.+++.+.. .+ .+.|++.|||++++|+.|+.+ +++..++ +++|++.. ..|...+|+++.+..+
T Consensus 140 ~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~-~~~~~~~--~~iQ~pV~~~~~~~~~~l~~~~~~E 216 (703)
T PRK15489 140 TCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYF-NYLLPRK--DLVQLPVLSLERKWYEWVAGTYMDE 216 (703)
T ss_pred CCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHH-HhhcCCc--ceeeeeeccCCCccccHHHHHHHHH
Confidence 4699999999987521 12 344999999999999999876 5553444 67898754 3455578999999999
Q ss_pred hhhhhhhhhhccccCCCcccccccceeeeHHHHHHc---C---CCCCCCccchHHHHHHHHhCCCeEEEec---------
Q 009761 237 LDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEA---G---GWKDRTTVEDMDLAVRASLKGWKFVYVG--------- 301 (526)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~---g---g~~~~~~~ED~~l~~rl~~~G~~~~~~~--------- 301 (526)
|...+......+...++....+|++++|||++++++ | +|+.++++||+|+++|++++||++.+.-
T Consensus 217 fa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~l~~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~ 296 (703)
T PRK15489 217 FAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLALMKERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRR 296 (703)
T ss_pred HHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHHHHHhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccc
Confidence 999888777777777777789999999999998876 5 4667889999999999999999999921
Q ss_pred --------------cccccccCCcChHHHHHHHHhhhcchH-HHHHhhccc
Q 009761 302 --------------DLKVKNELPSTFKAYRYQQHRWSCGPA-NLFKKMVGE 337 (526)
Q Consensus 302 --------------~~~~~~~~p~t~~~~~~Qr~RW~~G~~-~~~~~~~~~ 337 (526)
...+.++.|.|+++.++||.||..|.. |.+++..|.
T Consensus 297 ~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~~~~gw~ 347 (703)
T PRK15489 297 TSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGWEQMGWR 347 (703)
T ss_pred cccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhHHHhCCC
Confidence 133468899999999999999999987 887765443
No 17
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=100.00 E-value=3.9e-34 Score=272.01 Aligned_cols=230 Identities=31% Similarity=0.482 Sum_probs=179.7
Q ss_pred CcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEE-EEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCcc
Q 009761 91 PMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQ-VLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAG 168 (526)
Q Consensus 91 P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~-V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~ 168 (526)
|+|||+||+|||+ +.++++|+|+++|+||+++++|+ |+|+|+|++.+ +++....+ .+++++.++.+.|+|++
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~ 74 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRA-LAAELGVE-----YGYRYLTRPDNRHAKAG 74 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHH-HHHHhhcc-----cCceEEEeCCCCCCcHH
Confidence 6799999999987 78999999999999998644444 44557777655 66655333 24566667777888999
Q ss_pred HHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCc-HHHHHHHHhhhhhhhhhhhc
Q 009761 169 ALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADEC-LMTRMQEMSLDYHFTVEQEV 247 (526)
Q Consensus 169 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 247 (526)
++|.|++.+ ++||++++|+|+.++|+++++++..+++++++++|++.....+.+.. +..+................
T Consensus 75 ~~n~~~~~a---~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
T cd06421 75 NLNNALAHT---TGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPG 151 (234)
T ss_pred HHHHHHHhC---CCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999999999999999999999999766999999998776655432 12221111111111111111
Q ss_pred cccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcch
Q 009761 248 GSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCGP 327 (526)
Q Consensus 248 ~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~ 327 (526)
... .....+.|+++++||++++++|||++....||++++.|+.++|+++.+.|++.++++.|.+++++.+|+.||.+|.
T Consensus 152 ~~~-~~~~~~~g~~~~~r~~~~~~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~~~~~~~~~~~~~q~~rw~~~~ 230 (234)
T cd06421 152 RDR-WGAAFCCGSGAVVRREALDEIGGFPTDSVTEDLATSLRLHAKGWRSVYVPEPLAAGLAPETLAAYIKQRLRWARGM 230 (234)
T ss_pred Hhh-cCCceecCceeeEeHHHHHHhCCCCccceeccHHHHHHHHHcCceEEEecCccccccCCccHHHHHHHHHHHhcCC
Confidence 111 1233367999999999999999999988999999999999999999999999999999999999999999999998
Q ss_pred HHH
Q 009761 328 ANL 330 (526)
Q Consensus 328 ~~~ 330 (526)
++.
T Consensus 231 ~~~ 233 (234)
T cd06421 231 LQI 233 (234)
T ss_pred eee
Confidence 763
No 18
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=100.00 E-value=2e-35 Score=279.82 Aligned_cols=225 Identities=30% Similarity=0.454 Sum_probs=151.9
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEE-EcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC--CCc
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQV-LDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNG--YKA 167 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V-~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g--~K~ 167 (526)
|+|+|+||+|||++.+.++|+|+++|+||+ ++|+| +|+++|++.+ .+++.+++++ +.+++++...++.| +|+
T Consensus 1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~-~~~~~~~~~~--~~~v~vi~~~~~~g~~~k~ 75 (228)
T PF13641_consen 1 PRVSVVIPAYNEDDVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAE-ILRALAARYP--RVRVRVIRRPRNPGPGGKA 75 (228)
T ss_dssp --EEEE--BSS-HHHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCT-THHHHHHTTG--G-GEEEEE----HHHHHHH
T ss_pred CEEEEEEEecCCHHHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHH-HHHHHHHHcC--CCceEEeecCCCCCcchHH
Confidence 679999999999999999999999999976 44444 4556666655 5666666653 23567775555444 699
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhc
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEV 247 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (526)
.|+|.|++.+ ++|+++++|+|++++|++|++++..+ ++|++++|++.....+ +.++.+..+...+...+......
T Consensus 76 ~a~n~~~~~~---~~d~i~~lD~D~~~~p~~l~~~~~~~-~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 150 (228)
T PF13641_consen 76 RALNEALAAA---RGDYILFLDDDTVLDPDWLERLLAAF-ADPGVGAVGGPVFPDN-DRNWLTRLQDLFFARWHLRFRSG 150 (228)
T ss_dssp HHHHHHHHH------SEEEEE-SSEEE-CHHHHHHHHHH-HBSS--EEEEEEEETT-CCCEEEE-TT--S-EETTTS-TT
T ss_pred HHHHHHHHhc---CCCEEEEECCCcEECHHHHHHHHHHH-HhCCCCeEeeeEeecC-CCCHHHHHHHHHHhhhhhhhhhh
Confidence 9999999999 99999999999999999999999999 8999999999886654 45554444433322222222222
Q ss_pred cccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcc
Q 009761 248 GSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCG 326 (526)
Q Consensus 248 ~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 326 (526)
.... +..+++|+++++||++++++|||++....||.+++.|+.++||++.|.|++.++++.|.+++++.+||.||.+|
T Consensus 151 ~~~~-~~~~~~G~~~~~rr~~~~~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 151 RRAL-GVAFLSGSGMLFRRSALEEVGGFDPFILGEDFDLCLRLRAAGWRIVYAPDALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp -B-----S-B--TEEEEEHHHHHHH-S--SSSSSHHHHHHHHHHHTT--EEEEEEEEEEE--SSSTHHHHHHHHHHH--
T ss_pred hccc-ceeeccCcEEEEEHHHHHHhCCCCCCCcccHHHHHHHHHHCCCcEEEECCcEEEEeCCCCHHHHHHHHhccCcC
Confidence 2333 23446799999999999999999997788999999999999999999999999999999999999999999987
No 19
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=100.00 E-value=9e-34 Score=261.93 Aligned_cols=191 Identities=21% Similarity=0.323 Sum_probs=163.0
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC--CCcc
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNG--YKAG 168 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g--~K~~ 168 (526)
|+|||+||+|||++.++++|+|+.+|+||+.+ +|+|+|+|+|+|.+ .+++..++++ ..+++++....+.| +|++
T Consensus 1 p~vsviip~~n~~~~l~~~L~sl~~q~~~~~e-iivVdd~s~d~t~~-~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~ 76 (196)
T cd02520 1 PGVSILKPLCGVDPNLYENLESFFQQDYPKYE-ILFCVQDEDDPAIP-VVRKLIAKYP--NVDARLLIGGEKVGINPKVN 76 (196)
T ss_pred CCeEEEEecCCCCccHHHHHHHHHhccCCCeE-EEEEeCCCcchHHH-HHHHHHHHCC--CCcEEEEecCCcCCCCHhHH
Confidence 67999999999999999999999999999743 34477889998876 6666655532 23455554444433 4778
Q ss_pred HHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhcc
Q 009761 169 ALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVG 248 (526)
Q Consensus 169 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (526)
|+|.|++.+ ++||++++|+|+.++|++|++++..+ .+|++++|++.
T Consensus 77 ~~n~g~~~a---~~d~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~v~~~------------------------------ 122 (196)
T cd02520 77 NLIKGYEEA---RYDILVISDSDISVPPDYLRRMVAPL-MDPGVGLVTCL------------------------------ 122 (196)
T ss_pred HHHHHHHhC---CCCEEEEECCCceEChhHHHHHHHHh-hCCCCCeEEee------------------------------
Confidence 999999999 99999999999999999999999998 68899999876
Q ss_pred ccCCCcccccccceeeeHHHHHHcCCCCC--CCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcc
Q 009761 249 SSTYAFFGFNGTAGVWRISALNEAGGWKD--RTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCG 326 (526)
Q Consensus 249 ~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~--~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 326 (526)
+..|+++++||++++++|||++ ..+.||++++.|+.++|+++.+.|++.++++.|.+++++++||.||.+.
T Consensus 123 -------~~~g~~~~~r~~~~~~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 123 -------CAFGKSMALRREVLDAIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred -------cccCceeeeEHHHHHhccChHHHhHHHHHHHHHHHHHHHcCCeEEEcchheeccCCcccHHHHHHHHHHHhcc
Confidence 2568999999999999999986 3468999999999999999999999999999999999999999999875
No 20
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=100.00 E-value=3.8e-34 Score=273.35 Aligned_cols=203 Identities=21% Similarity=0.240 Sum_probs=171.4
Q ss_pred EEEecCCCh-HHHHHHHHHHHcCCCC--------CCceEEEE-EcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC
Q 009761 95 VQIPMYNEK-EVYQLSIGAACGLSWP--------SDRITIQV-LDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNG 164 (526)
Q Consensus 95 ViIp~yne~-~~l~~~L~sl~~q~yp--------~~~~~I~V-~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 164 (526)
|+||+|||+ .+|+++|+|+++|+|| .++++|+| +|+|+| .+.
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d----------------------------~~~ 52 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK----------------------------KNR 52 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc----------------------------ccC
Confidence 689999997 7999999999999999 56666655 677887 112
Q ss_pred CCcc-------HHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhh
Q 009761 165 YKAG-------ALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSL 237 (526)
Q Consensus 165 ~K~~-------aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~ 237 (526)
||.. ++|.++..+ ++|+++++|+|++++||+|++++.+|+++|++++|+|.....|...+++.+.|..++
T Consensus 53 gk~~~~~~~~~~~~~~~~~a---~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~~~~~~~~q~~ey 129 (244)
T cd04190 53 GKRDSQLWFFNYFCRVLFPD---DPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKKQGPLVMYQVFEY 129 (244)
T ss_pred cchHHHHHHHHHHHHHhhcC---CCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCcchhHHHhHheeh
Confidence 2443 567777777 999999999999999999999999997899999999999888876788888888776
Q ss_pred hhhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCC--------------------CCccchHHHHHHHHhCCCeE
Q 009761 238 DYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKD--------------------RTTVEDMDLAVRASLKGWKF 297 (526)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~--------------------~~~~ED~~l~~rl~~~G~~~ 297 (526)
...+...+...+..+...+.+|+++++|++++++.|++.. ..++||.+++.++..+||++
T Consensus 130 ~~~~~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~~G~~~ 209 (244)
T cd04190 130 AISHWLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKR 209 (244)
T ss_pred hhhhhhcccHHHcCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhccCCcc
Confidence 6554444444555666777899999999999999976543 13789999999999999999
Q ss_pred EE--eccccccccCCcChHHHHHHHHhhhcchH
Q 009761 298 VY--VGDLKVKNELPSTFKAYRYQQHRWSCGPA 328 (526)
Q Consensus 298 ~~--~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~ 328 (526)
.| .|++.++++.|+|++++++||.||.+|.+
T Consensus 210 ~~~~~~~a~~~~~~p~s~~~~~~QR~RW~~g~~ 242 (244)
T cd04190 210 KYLYVPGAVAETDVPETFVELLSQRRRWINSTI 242 (244)
T ss_pred EEEEecccEEEEECCCCHHHHHHHhHhhhcccc
Confidence 99 99999999999999999999999999975
No 21
>PLN02189 cellulose synthase
Probab=100.00 E-value=1.3e-30 Score=276.45 Aligned_cols=394 Identities=19% Similarity=0.278 Sum_probs=258.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccc-cccccccc--cCCCCCCcEEEEEecCCCh----HHHHHHHHHHHcCCC
Q 009761 46 SIMLFVERVYMGIVIVLLKLFGRKPEKRYKW-EAIKDDVE--LGNSAYPMVLVQIPMYNEK----EVYQLSIGAACGLSW 118 (526)
Q Consensus 46 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~P~VsViIp~yne~----~~l~~~L~sl~~q~y 118 (526)
+++.++..+++++.+++....++.|..+... +...+..+ ..+.++|.|.|+|++-+.. -...+|+-|+++.||
T Consensus 283 W~~s~~~E~wFaf~Wll~q~~kw~Pv~R~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DY 362 (1040)
T PLN02189 283 WLTSIICEIWFAVSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDY 362 (1040)
T ss_pred HHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcc
Confidence 4555666677777777777777777665322 11111111 1124599999999997764 378899999999999
Q ss_pred CCCceEEEEEcCC-CchhHHHHHHHH---------HHH-------------------------------------h----
Q 009761 119 PSDRITIQVLDDS-TDPTIKDLVELE---------CQR-------------------------------------W---- 147 (526)
Q Consensus 119 p~~~~~I~V~D~s-~D~t~~~l~~~~---------~~~-------------------------------------~---- 147 (526)
|.+++-++|.||+ +.-|.+.+.|.. |++ |
T Consensus 363 P~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k 442 (1040)
T PLN02189 363 PVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFK 442 (1040)
T ss_pred cccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHH
Confidence 9999999999884 444444444310 000 0
Q ss_pred -------------hc--------------------------------------cCCcEEEEeeCCCCC----CCccHHHH
Q 009761 148 -------------AS--------------------------------------KGINIKYEIRDSRNG----YKAGALKE 172 (526)
Q Consensus 148 -------------~~--------------------------------------~~~~v~~~~~~~~~g----~K~~aln~ 172 (526)
+. .-++++|+.|+++.| .||||+|.
T Consensus 443 vRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNa 522 (1040)
T PLN02189 443 VRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNA 522 (1040)
T ss_pred HHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCcccchhhHHH
Confidence 00 002288999988765 69999999
Q ss_pred Hhhhhcc-cCCcEEEEecCCCCC-ChHHHHHHHhhhhcCC----CEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhh
Q 009761 173 GMKHSYV-KQCDYVAIFDADFEP-EPDFLWRTIPFLVHNP----DIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQE 246 (526)
Q Consensus 173 gl~~a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (526)
.++.+.. .+++||+.+|+|..+ +|+.+++.+.+| .|| +++.||.++++.|.+++ .........++...+.
T Consensus 523 LlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCff-lDp~~g~~vAfVQFPQrF~~i~k~---D~Ygn~~~vffdi~~~ 598 (1040)
T PLN02189 523 LIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFL-MDPQIGRKVCYVQFPQRFDGIDTH---DRYANRNTVFFDINMK 598 (1040)
T ss_pred HHHHhhhccCCCeEEEccCccccCchHHHHHhhhhh-cCCccCceeEEEeCccccCCCCCC---CccCCccceeeeeeec
Confidence 9987643 699999999999888 569999999998 577 89999999999887643 1122233445566666
Q ss_pred ccccCCCcccccccceeeeHHHHHHcC-----------------------------------------------------
Q 009761 247 VGSSTYAFFGFNGTAGVWRISALNEAG----------------------------------------------------- 273 (526)
Q Consensus 247 ~~~~~~~~~~~~G~~~~~Rr~~l~~~g----------------------------------------------------- 273 (526)
+.++.++.+ +.|+++++||+++....
T Consensus 599 GlDGlqGP~-YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (1040)
T PLN02189 599 GLDGIQGPV-YVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMN 677 (1040)
T ss_pred ccccCCCcc-ccccCceeeeeeeeccCcccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhh
Confidence 667777665 67999999998775210
Q ss_pred -----------------------------------------------------CCCCCCccchHHHHHHHHhCCCeEEEe
Q 009761 274 -----------------------------------------------------GWKDRTTVEDMDLAVRASLKGWKFVYV 300 (526)
Q Consensus 274 -----------------------------------------------------g~~~~~~~ED~~l~~rl~~~G~~~~~~ 300 (526)
||..++++||+..+++++.+|||.+|+
T Consensus 678 ~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~ 757 (1040)
T PLN02189 678 FEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYC 757 (1040)
T ss_pred hHhhhccchhhhhhhhhhhcCCCCCCCcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEec
Confidence 344445899999999999999999999
Q ss_pred c--cccccccCCcChHHHHHHHHhhhcchHHHHHhhcccccc---cCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009761 301 G--DLKVKNELPSTFKAYRYQQHRWSCGPANLFKKMVGEIMR---TKKVTLWKKLYVIYSFFFVRKVVAHIVTFVFYCVL 375 (526)
Q Consensus 301 ~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 375 (526)
. .....+..|.++.+++.||.||+.|.+|++......++. .+++++.|++.|+...++. +..+. .+ ..++
T Consensus 758 ~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~---~~sip-~l-iY~~ 832 (1040)
T PLN02189 758 MPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP---FTSLP-LL-AYCT 832 (1040)
T ss_pred CCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH---HHHHH-HH-HHHH
Confidence 4 344579999999999999999999999998644344542 3668999999987655442 11221 12 2235
Q ss_pred HHHHhhcCC------chhhHHHHHHHHHHHHH-----HHHh----ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 009761 376 LPATVLFPE------VEVPKWGAVYIPSIITL-----LNAV----GTPRSLHLLVFWILFENVMSLHRTKATFIGLLEA- 439 (526)
Q Consensus 376 ~~~~~l~~~------~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~- 439 (526)
+|+.+++.. .+.+. ..+++.++.++ +-.. ..+.+|..-.+|++-... ..+.|++.++++.
T Consensus 833 lP~l~Ll~g~~i~p~vs~~~-~~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~S---a~Lfavl~~ilKvl 908 (1040)
T PLN02189 833 LPAICLLTGKFIMPPISTFA-SLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVS---AHLFAVVQGLLKVL 908 (1040)
T ss_pred HHHHHHhcCCcccCccchHH-HHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhH---HHHHHHHHHHHHHh
Confidence 566655432 22221 11111111111 1111 112234444556543221 1223445555543
Q ss_pred -CCCcceEEecccCC
Q 009761 440 -GRVNEWVVTEKLGD 453 (526)
Q Consensus 440 -~~~~~w~~T~K~~~ 453 (526)
+++..|.+|+|...
T Consensus 909 ggs~~~F~VTsK~~~ 923 (1040)
T PLN02189 909 AGIDTNFTVTSKATD 923 (1040)
T ss_pred ccCcccceecccccc
Confidence 78999999999654
No 22
>PLN02195 cellulose synthase A
Probab=100.00 E-value=3.3e-30 Score=272.00 Aligned_cols=395 Identities=20% Similarity=0.301 Sum_probs=258.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccccc-cccccccc--cCCCCCCcEEEEEecCCCh----HHHHHHHHHHHcCC
Q 009761 45 LSIMLFVERVYMGIVIVLLKLFGRKPEKRYKW-EAIKDDVE--LGNSAYPMVLVQIPMYNEK----EVYQLSIGAACGLS 117 (526)
Q Consensus 45 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~P~VsViIp~yne~----~~l~~~L~sl~~q~ 117 (526)
++++.++..+.+++.+++....++.|..+... +...+..+ ..+.++|.|.|.|++-+.. -...+|+-|+++.|
T Consensus 203 ~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~D 282 (977)
T PLN02195 203 LWLTSVICEIWFAFSWVLDQFPKWSPINRETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVD 282 (977)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccceECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhc
Confidence 34555666777777777777788877665322 11111111 1235699999999997764 37889999999999
Q ss_pred CCCCceEEEEEcCC-CchhHHHHHHHH---------HHHh----------------------------------------
Q 009761 118 WPSDRITIQVLDDS-TDPTIKDLVELE---------CQRW---------------------------------------- 147 (526)
Q Consensus 118 yp~~~~~I~V~D~s-~D~t~~~l~~~~---------~~~~---------------------------------------- 147 (526)
||.+++-++|+||+ +.-|.+.+.|.. |+++
T Consensus 283 YP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~ 362 (977)
T PLN02195 283 YPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEY 362 (977)
T ss_pred ccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHH
Confidence 99999999999884 344444343310 0000
Q ss_pred --------------hc--------------------------------------cCCcEEEEeeCCCCC----CCccHHH
Q 009761 148 --------------AS--------------------------------------KGINIKYEIRDSRNG----YKAGALK 171 (526)
Q Consensus 148 --------------~~--------------------------------------~~~~v~~~~~~~~~g----~K~~aln 171 (526)
+. .-++++|++|+++.| .||||+|
T Consensus 363 k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamN 442 (977)
T PLN02195 363 KVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGETGARDIEGNELPRLVYVSREKRPGYQHHKKAGAEN 442 (977)
T ss_pred HHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCCCCcccccccCceeEEEeccCCCCCCcccccchhH
Confidence 00 012277888888765 6999999
Q ss_pred HHhhhhcc-cCCcEEEEecCCCCC-ChHHHHHHHhhhhcCC----CEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhh
Q 009761 172 EGMKHSYV-KQCDYVAIFDADFEP-EPDFLWRTIPFLVHNP----DIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQ 245 (526)
Q Consensus 172 ~gl~~a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (526)
.+++.+.. .++++|+.+|+|..+ +++++++.+.+| .|| +++.||.++.+.|.+.+ .........++...+
T Consensus 443 allrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~-~D~~~g~~va~VQ~PQ~F~~i~~~---D~y~~~~~~ffd~~~ 518 (977)
T PLN02195 443 ALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFL-MDPVVGRDVCYVQFPQRFDGIDRS---DRYANRNVVFFDVNM 518 (977)
T ss_pred HHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhc-cCcccCCeeEEEcCCcccCCCCCC---CCCCcccceeeeeee
Confidence 99987642 689999999999766 557999999988 577 78899999999887643 112222344556666
Q ss_pred hccccCCCcccccccceeeeHHHHHHcC----------------------------------------------------
Q 009761 246 EVGSSTYAFFGFNGTAGVWRISALNEAG---------------------------------------------------- 273 (526)
Q Consensus 246 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~g---------------------------------------------------- 273 (526)
.+.++.++.+ +.|+++++||+++...+
T Consensus 519 ~g~dglqGP~-YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (977)
T PLN02195 519 KGLDGIQGPV-YVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREID 597 (977)
T ss_pred ccccccCCcc-ccccCceeeehhhhccCccccccccccccccccccccccccccccchhhcccccccccccccccccccc
Confidence 6677777665 67999999998886432
Q ss_pred --------------------------------------------------------------------CCCCCCccchHH
Q 009761 274 --------------------------------------------------------------------GWKDRTTVEDMD 285 (526)
Q Consensus 274 --------------------------------------------------------------------g~~~~~~~ED~~ 285 (526)
||..++++||+.
T Consensus 598 ~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~ 677 (977)
T PLN02195 598 NYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDIL 677 (977)
T ss_pred ccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHH
Confidence 222334799999
Q ss_pred HHHHHHhCCCeEEEeccc--cccccCCcChHHHHHHHHhhhcchHHHHHhhcccccc---cCCCChhHHHHHHHHHHHHH
Q 009761 286 LAVRASLKGWKFVYVGDL--KVKNELPSTFKAYRYQQHRWSCGPANLFKKMVGEIMR---TKKVTLWKKLYVIYSFFFVR 360 (526)
Q Consensus 286 l~~rl~~~G~~~~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 360 (526)
.+++++.+|||.+|++.. ...+..|.++.+++.||.||+.|.+|++......++. .+++++.|++.|+...++.
T Consensus 678 TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~- 756 (977)
T PLN02195 678 TGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYP- 756 (977)
T ss_pred HHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHH-
Confidence 999999999999999653 3579999999999999999999999998743344442 3679999999987654442
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC------chhhHHHHHHHHHHHHH-HHH---h-----ccchhhHHHHHHHHHHHHHH
Q 009761 361 KVVAHIVTFVFYCVLLPATVLFPE------VEVPKWGAVYIPSIITL-LNA---V-----GTPRSLHLLVFWILFENVMS 425 (526)
Q Consensus 361 ~~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~-~~~---~-----~~~~~~~~~~~~~~~~~~~~ 425 (526)
+..+. .+ ..+++|+.+++.. ...+ |..+++..++.. +.. + ..+.+|..-.+|++-...
T Consensus 757 --~~slp-~l-iY~~lP~l~Ll~G~~i~P~vs~~-~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tS-- 829 (977)
T PLN02195 757 --FTSLP-LI-AYCTLPAICLLTGKFIIPTLSNL-ASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVS-- 829 (977)
T ss_pred --HHHHH-HH-HHHHHHHHHHHcCCeecccchHH-HHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhH--
Confidence 11221 12 2235566655422 2221 222222221111 111 1 122244445566543221
Q ss_pred HHHHHHHHHHHHhc--CCCcceEEecccCC
Q 009761 426 LHRTKATFIGLLEA--GRVNEWVVTEKLGD 453 (526)
Q Consensus 426 ~~~~~a~~~~l~~~--~~~~~w~~T~K~~~ 453 (526)
..+.|++.++++. +++..|.+|+|..+
T Consensus 830 -a~Lfavl~~llKvLggs~~~F~VTsK~~d 858 (977)
T PLN02195 830 -AHLFAVFQGFLKMLAGLDTNFTVTAKAAD 858 (977)
T ss_pred -HHHHHHHHHHHHHHcCCCccceecccccc
Confidence 1233445555554 78999999999654
No 23
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=4.6e-30 Score=272.89 Aligned_cols=325 Identities=19% Similarity=0.257 Sum_probs=205.6
Q ss_pred EEEEeeCCCCC----CCccHHHHHhhhhcc-cCCcEEEEecCCCCC-ChHHHHHHHhhhhcC---CCEEEEeeEEEEecC
Q 009761 154 IKYEIRDSRNG----YKAGALKEGMKHSYV-KQCDYVAIFDADFEP-EPDFLWRTIPFLVHN---PDIALVQARWKFVNA 224 (526)
Q Consensus 154 v~~~~~~~~~g----~K~~aln~gl~~a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~---~~v~~V~~~~~~~~~ 224 (526)
++|+.|+++.| .||||||..++.+.. .+++||+.+|+|..+ +++.+++.+.+|. | ++++.||.++++.|.
T Consensus 587 LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~l-D~~g~~vAfVQFPQrF~~I 665 (1135)
T PLN02248 587 LVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMM-DRGGDRICYVQFPQRFEGI 665 (1135)
T ss_pred eEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchhee-cCCCCceEEEcCCcccCCC
Confidence 45666666554 699999999986543 699999999999776 6679999999984 5 799999999999887
Q ss_pred CCcHHHHHHHHhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcC-------------------------------
Q 009761 225 DECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAG------------------------------- 273 (526)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~g------------------------------- 273 (526)
+++ .........+|...+.+.++.++.+ +.|+++++||+++...+
T Consensus 666 ~k~---D~Ygn~~~Vffdi~~~GlDGlqGP~-YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 666 DPS---DRYANHNTVFFDVNMRALDGLQGPV-YVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred CCC---CccCCcceeeeeeeeccccccCCcc-ccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 643 1222234445566666667777665 67999999998876320
Q ss_pred --------------------------------------------------------------------------------
Q 009761 274 -------------------------------------------------------------------------------- 273 (526)
Q Consensus 274 -------------------------------------------------------------------------------- 273 (526)
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence
Q ss_pred -------CCCCCCccchHHHHHHHHhCCCeEEEec--cccccccCCcChHHHHHHHHhhhcchHHHHHhhcccccccCCC
Q 009761 274 -------GWKDRTTVEDMDLAVRASLKGWKFVYVG--DLKVKNELPSTFKAYRYQQHRWSCGPANLFKKMVGEIMRTKKV 344 (526)
Q Consensus 274 -------g~~~~~~~ED~~l~~rl~~~G~~~~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~ 344 (526)
||..++++||+..+++++.+|||.+|+. .....+..|.++.+++.||.||+.|.+|++......++..+++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~~~L 901 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRRL 901 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccCCCC
Confidence 2333447999999999999999999984 3445699999999999999999999999987554556666789
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-chh----hHHHHHHHHHHHH-HHHHhc--------cchh
Q 009761 345 TLWKKLYVIYSFFFVRKVVAHIVTFVFYCVLLPATVLFPE-VEV----PKWGAVYIPSIIT-LLNAVG--------TPRS 410 (526)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~----~~~~~~~~~~~~~-~~~~~~--------~~~~ 410 (526)
++.|++.|+...++. +..+. .+.| +++|+++++.. ..+ +.+..+++++++. ....+. .+.+
T Consensus 902 sl~QRL~Yl~~~lyp---f~Slp-~liY-~llP~l~LLtGi~~~p~~~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~W 976 (1135)
T PLN02248 902 KFLQRIAYLNVGIYP---FTSIF-LIVY-CFLPALSLFSGQFIVQTLNVTFLVYLLIITITLCLLAVLEIKWSGITLEEW 976 (1135)
T ss_pred CHHHHHHHHHHHHHH---HHHHH-HHHH-HHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhhccccHHHH
Confidence 999999987654431 11221 2222 34566655432 111 2222223232222 111111 1122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcceEEecccCCcccccCCcccCCcccccCchhHHHHHHHHHHHHHH
Q 009761 411 LHLLVFWILFENVMSLHRTKATFIGLLEA--GRVNEWVVTEKLGDVKSKLGGKTLKKPRIRIGERVHVLELGVGAYLFLC 488 (526)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~w~~T~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (526)
|..-.+|++... -..+.|++.++++. +++..|.+|+|.......++ + ...+..+. ..+.++.+++++..+++
T Consensus 977 WrnQq~W~I~~t---SA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~-~-a~ly~f~w-S~L~iP~ttl~llNLvA 1050 (1135)
T PLN02248 977 WRNEQFWLIGGT---SAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDE-F-ADLYIVKW-TSLMIPPITIMMVNLIA 1050 (1135)
T ss_pred hhhhheeeehhh---HHHHHHHHHHHHHHhcCccccceeCCcccccccccc-c-chheecCc-chHHHHHHHHHHHHHHH
Confidence 333344443221 12234666666654 78899999999775432222 1 11122221 22444555555555554
Q ss_pred HHHHHH
Q 009761 489 GCYDVA 494 (526)
Q Consensus 489 ~~~~~~ 494 (526)
+...+.
T Consensus 1051 ivvGv~ 1056 (1135)
T PLN02248 1051 IAVGVS 1056 (1135)
T ss_pred HHHHHH
Confidence 444443
No 24
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=4.3e-30 Score=273.41 Aligned_cols=395 Identities=19% Similarity=0.301 Sum_probs=258.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccc-cccccccc--cCCCCCCcEEEEEecCCCh----HHHHHHHHHHHcCCC
Q 009761 46 SIMLFVERVYMGIVIVLLKLFGRKPEKRYKW-EAIKDDVE--LGNSAYPMVLVQIPMYNEK----EVYQLSIGAACGLSW 118 (526)
Q Consensus 46 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~P~VsViIp~yne~----~~l~~~L~sl~~q~y 118 (526)
+++.++..+++++.+++....++.|..+... +...+..+ ..+.++|.|.|+|++-+.. -...+|+-|+++.||
T Consensus 301 Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DY 380 (1079)
T PLN02638 301 WLISVICEIWFALSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDY 380 (1079)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccccccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcc
Confidence 4566666777788888888888887665432 11111111 1135699999999998764 378899999999999
Q ss_pred CCCceEEEEEcC-CCchhHHHHHHHH---------HHH-------------------------------------h----
Q 009761 119 PSDRITIQVLDD-STDPTIKDLVELE---------CQR-------------------------------------W---- 147 (526)
Q Consensus 119 p~~~~~I~V~D~-s~D~t~~~l~~~~---------~~~-------------------------------------~---- 147 (526)
|.+++-++|.|| ++.-|.+.+.|.. |++ |
T Consensus 381 P~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k 460 (1079)
T PLN02638 381 PVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFK 460 (1079)
T ss_pred cccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHH
Confidence 999999999988 4444444444410 000 0
Q ss_pred -------------hc--------------------------------------cCCcEEEEeeCCCCC----CCccHHHH
Q 009761 148 -------------AS--------------------------------------KGINIKYEIRDSRNG----YKAGALKE 172 (526)
Q Consensus 148 -------------~~--------------------------------------~~~~v~~~~~~~~~g----~K~~aln~ 172 (526)
+. .-+++.|++|+++.| .||||||.
T Consensus 461 ~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNa 540 (1079)
T PLN02638 461 VRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNA 540 (1079)
T ss_pred HHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHHHhcCCCccccccccccceEEEecccCCCCCcccccchHHH
Confidence 00 001258888988765 69999999
Q ss_pred Hhhhhcc-cCCcEEEEecCCCCC-ChHHHHHHHhhhhcCCC----EEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhh
Q 009761 173 GMKHSYV-KQCDYVAIFDADFEP-EPDFLWRTIPFLVHNPD----IALVQARWKFVNADECLMTRMQEMSLDYHFTVEQE 246 (526)
Q Consensus 173 gl~~a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~----v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (526)
.++.+.. .+++||+.+|+|..+ +|+.+++.+.+| .||+ ++.||.++++.|.+++ .........+|...+.
T Consensus 541 LlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~-lDp~~g~~vafVQFPQrF~~i~k~---D~Ygn~~~vffdi~~~ 616 (1079)
T PLN02638 541 LVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFL-MDPNLGKSVCYVQFPQRFDGIDRN---DRYANRNTVFFDINLR 616 (1079)
T ss_pred HHHHhhhccCCCeEeecccCcccCchHHHHHhhhhh-cCcccCCeeEEecCCcccCCCCCC---Ccccccceeeeccccc
Confidence 9987643 699999999999766 599999999998 5775 8899999999887643 1222234445666666
Q ss_pred ccccCCCcccccccceeeeHHHHHHcC-----------------------------------------------------
Q 009761 247 VGSSTYAFFGFNGTAGVWRISALNEAG----------------------------------------------------- 273 (526)
Q Consensus 247 ~~~~~~~~~~~~G~~~~~Rr~~l~~~g----------------------------------------------------- 273 (526)
+.++.++.+ +.|+++++||+++....
T Consensus 617 GlDGlqGP~-YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (1079)
T PLN02638 617 GLDGIQGPV-YVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDI 695 (1079)
T ss_pred cccccCCcc-ccccCcceeehhhcCcCCcccccccccccccccccccccccccccchhhccccccccccccccccccccc
Confidence 667777665 67999999998876320
Q ss_pred --------------------------------------------------------------------------CCCCCC
Q 009761 274 --------------------------------------------------------------------------GWKDRT 279 (526)
Q Consensus 274 --------------------------------------------------------------------------g~~~~~ 279 (526)
||..++
T Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGS 775 (1079)
T PLN02638 696 EEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGS 775 (1079)
T ss_pred cccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCCCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecc
Confidence 122234
Q ss_pred ccchHHHHHHHHhCCCeEEEe-cccc-ccccCCcChHHHHHHHHhhhcchHHHHHhhcccccc--cCCCChhHHHHHHHH
Q 009761 280 TVEDMDLAVRASLKGWKFVYV-GDLK-VKNELPSTFKAYRYQQHRWSCGPANLFKKMVGEIMR--TKKVTLWKKLYVIYS 355 (526)
Q Consensus 280 ~~ED~~l~~rl~~~G~~~~~~-~~~~-~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 355 (526)
++||+..+++++.+|||.+|+ |+.. ..+..|.++.+++.||.||+.|.+|++......++. .+++++.|++.|+..
T Consensus 776 vTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~ 855 (1079)
T PLN02638 776 VTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNT 855 (1079)
T ss_pred eecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHH
Confidence 799999999999999999999 4433 469999999999999999999999997533234442 467999999998765
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCC------chhhH--H-HHHHHHHHHHH-HHHh----ccchhhHHHHHHHHHH
Q 009761 356 FFFVRKVVAHIVTFVFYCVLLPATVLFPE------VEVPK--W-GAVYIPSIITL-LNAV----GTPRSLHLLVFWILFE 421 (526)
Q Consensus 356 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~~------~~~~~--~-~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~ 421 (526)
.++. +..+. .+.| +++|+.+++.. ...+. + ..++++..+.- +-.. ....+|..-.+|++-.
T Consensus 856 ~~yp---~~sip-~liY-~llP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~ 930 (1079)
T PLN02638 856 TIYP---ITSIP-LLLY-CTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGG 930 (1079)
T ss_pred HHHH---HHHHH-HHHH-HHHHHHHHHcCCccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhh
Confidence 4432 11211 1222 34565554422 21111 1 11111111111 1111 1223344445565432
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCcceEEecccCC
Q 009761 422 NVMSLHRTKATFIGLLEA--GRVNEWVVTEKLGD 453 (526)
Q Consensus 422 ~~~~~~~~~a~~~~l~~~--~~~~~w~~T~K~~~ 453 (526)
.. ..+.|++.++++. +++..|.+|+|..+
T Consensus 931 tS---a~lfavl~~iLK~Lggs~~~F~VTsK~~d 961 (1079)
T PLN02638 931 VS---AHLFAVFQGLLKVLAGIDTNFTVTSKASD 961 (1079)
T ss_pred hH---HHHHHHHHHHHHHHccCcccceecccccc
Confidence 21 1233445555444 78999999999654
No 25
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.5e-30 Score=268.88 Aligned_cols=387 Identities=18% Similarity=0.267 Sum_probs=251.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccccCCCCCCcEEEEEecCC---Ch-HHHHHHHHHHHcCCCCCC
Q 009761 46 SIMLFVERVYMGIVIVLLKLFGRKPEKRYKWEAIKDDVELGNSAYPMVLVQIPMYN---EK-EVYQLSIGAACGLSWPSD 121 (526)
Q Consensus 46 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~VsViIp~yn---e~-~~l~~~L~sl~~q~yp~~ 121 (526)
++.++++..++.+.+++....+++|.++. +.++.....-+++|.|.|.|+++| |+ ..+.+|+.|+++.|||.+
T Consensus 51 W~~~~~~E~wf~~~WlL~q~~kw~pv~r~---~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~e 127 (756)
T PLN02190 51 WLVAFLCESCFSFVWLLITCIKWSPAEYK---PYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPAN 127 (756)
T ss_pred HHHHHHHHHHHHHHHHHhccceeeecCCC---CCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCcc
Confidence 34466667777887777777788776653 333332222246899999999999 87 689999999999999999
Q ss_pred ceEEEEEcCC-CchhHHHHHHHH---------HHH----------------------------------hh-------c-
Q 009761 122 RITIQVLDDS-TDPTIKDLVELE---------CQR----------------------------------WA-------S- 149 (526)
Q Consensus 122 ~~~I~V~D~s-~D~t~~~l~~~~---------~~~----------------------------------~~-------~- 149 (526)
++-++|.||+ +.-|.+.+.|.. |++ |. +
T Consensus 128 klscYvSDDG~s~LT~~al~EAa~FA~~WvPFCrK~~IepRaPe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a 207 (756)
T PLN02190 128 KLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDA 207 (756)
T ss_pred ccceEEecCCCcHhHHHHHHHHHHHHhhhcccccccCCCcCCHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999884 344444444411 110 00 0
Q ss_pred ------------------------------------------cCCcEEEEeeCCCCC----CCccHHHHHhhhhcc-cCC
Q 009761 150 ------------------------------------------KGINIKYEIRDSRNG----YKAGALKEGMKHSYV-KQC 182 (526)
Q Consensus 150 ------------------------------------------~~~~v~~~~~~~~~g----~K~~aln~gl~~a~~-~~~ 182 (526)
.-++++|++|++|.+ .||||+|..++.+.. .++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll~~~~~~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNa 287 (756)
T PLN02190 208 TGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVWENKGGVGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNA 287 (756)
T ss_pred ccCCCCcccCCcccccCCCCCCCCccceEEEecCCCCccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccC
Confidence 012367788877655 799999999988653 799
Q ss_pred cEEEEecCCC-CCChHHHHHHHhhhhcCC----CEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCcccc
Q 009761 183 DYVAIFDADF-EPEPDFLWRTIPFLVHNP----DIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGF 257 (526)
Q Consensus 183 d~v~~lDaD~-~~~pd~L~~lv~~~~~~~----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (526)
++|+.+|+|. ..+|+.+++.+..|.+++ +++.||.++++.+...+ +....+.....+-++.+++. .
T Consensus 288 P~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~D~y~n--------~~~v~f~~~~~GldGlqGP~-Y 358 (756)
T PLN02190 288 PYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFYDSNTN--------ELTVLQSYLGRGIAGIQGPI-Y 358 (756)
T ss_pred CeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhhccccCc--------cceEEEEEeeccccccCCcc-c
Confidence 9999999996 558999999999885332 68999999988654222 12223333444444555544 5
Q ss_pred cccceeeeHHHHHHc-----------------------------------------------------------------
Q 009761 258 NGTAGVWRISALNEA----------------------------------------------------------------- 272 (526)
Q Consensus 258 ~G~~~~~Rr~~l~~~----------------------------------------------------------------- 272 (526)
.|+++++||+++-..
T Consensus 359 vGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~~~~~~~~~eA~~V~s 438 (756)
T PLN02190 359 IGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQNSLTNSIEAAQEVGH 438 (756)
T ss_pred ccCCcceEeeeecCCCcccccccccccccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCCccchHHHHHHHHhhcc
Confidence 677787777665410
Q ss_pred ------------CCCCCCCccchHHHHHHHHhCCCeEEEeccc--cccccCCcChHHHHHHHHhhhcchHHHHHhhcccc
Q 009761 273 ------------GGWKDRTTVEDMDLAVRASLKGWKFVYVGDL--KVKNELPSTFKAYRYQQHRWSCGPANLFKKMVGEI 338 (526)
Q Consensus 273 ------------gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~ 338 (526)
-||..++++||..++++++.+|||.+|+... ...+..|.++.+.+.||+||+.|.+|++......+
T Consensus 439 C~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl 518 (756)
T PLN02190 439 CHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPL 518 (756)
T ss_pred cCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCc
Confidence 0555666899999999999999999998633 33588999999999999999999999976543445
Q ss_pred cc--cCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-chhh--HHHHHHHHHHHHH-HHHh-------
Q 009761 339 MR--TKKVTLWKKLYVIYSFFFVRKVVAHIVTFVFYCVLLPATVLFPE-VEVP--KWGAVYIPSIITL-LNAV------- 405 (526)
Q Consensus 339 ~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~--~~~~~~~~~~~~~-~~~~------- 405 (526)
+. .+++++.|++.++...+ . +..+. .+.| +++|...++.. ...| .|..+++..+++. +..+
T Consensus 519 ~~g~~~~L~l~QRLaYl~~~~-~---~~sip-~l~Y-~~lP~l~Ll~g~~i~P~~~~~~~~~~l~~~~~~~~l~E~~~sG 592 (756)
T PLN02190 519 IGMFCRKIRFRQRLAYLYVFT-C---LRSIP-ELIY-CLLPAYCLLHNSALFPKGVYLGIIVTLVGMHCLYTLWEFMSLG 592 (756)
T ss_pred eeccCCCCCHHHHHHHHHHHH-H---HHHHH-HHHH-HHHHHHHHHcCCccccCccHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 43 47899999999875433 1 11111 1122 34565554422 1112 1222111111111 1111
Q ss_pred -ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcceEEecccCC
Q 009761 406 -GTPRSLHLLVFWILFENVMSLHRTKATFIGLLEA--GRVNEWVVTEKLGD 453 (526)
Q Consensus 406 -~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~w~~T~K~~~ 453 (526)
..+.+|..-.+|++-.. -....|++.++++. +++..|.+|.|..+
T Consensus 593 ~s~~~WWnnqr~w~I~~~---sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~ 640 (756)
T PLN02190 593 FSVQSWYVSQSFWRIKAT---SSWLFSIQDIILKLLGISKTVFIVTKKTMP 640 (756)
T ss_pred CcHHHHHhhhheEEeecc---hHHHHHHHHHHHHHhccccceEEEeecccc
Confidence 11233334444543221 11234666666665 68999999999654
No 26
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.97 E-value=2.9e-31 Score=252.50 Aligned_cols=222 Identities=22% Similarity=0.226 Sum_probs=174.2
Q ss_pred cEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHH
Q 009761 92 MVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGAL 170 (526)
Q Consensus 92 ~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~al 170 (526)
+|||+||+|||+ +.+++||+|+.+|+ | . .+|+|+|+|+|++.+.+ +.. .+...+.+. . .+++||++|+
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~-~-~-eiivvdd~s~d~~~~~l-~~~-----~~~~~~~v~-~-~~~~g~~~a~ 69 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK-P-L-EIIVVTDGDDEPYLSIL-SQT-----VKYGGIFVI-T-VPHPGKRRAL 69 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC-C-C-EEEEEeCCCChHHHHHH-Hhh-----ccCCcEEEE-e-cCCCChHHHH
Confidence 489999999999 99999999999998 4 3 34557788888887644 211 113445555 3 4456699999
Q ss_pred HHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhcccc
Q 009761 171 KEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSS 250 (526)
Q Consensus 171 n~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (526)
|.|++.+ ++|+|+++|+|+.++||+|++++..++ +|++++|++.....+.+.+.........+.............
T Consensus 70 n~g~~~a---~~d~v~~lD~D~~~~~~~l~~l~~~~~-~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (235)
T cd06434 70 AEGIRHV---TTDIVVLLDSDTVWPPNALPEMLKPFE-DPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSY 145 (235)
T ss_pred HHHHHHh---CCCEEEEECCCceeChhHHHHHHHhcc-CCCEeEEcCceEeecCcccHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999 999999999999999999999999995 999999999988777644555444433333322222223334
Q ss_pred CCCcccccccceeeeHHHHHHcCCCCC----------CCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHH
Q 009761 251 TYAFFGFNGTAGVWRISALNEAGGWKD----------RTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQ 320 (526)
Q Consensus 251 ~~~~~~~~G~~~~~Rr~~l~~~gg~~~----------~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr 320 (526)
.+...+.+|+++++||+++++.++..+ ...+||.+++.++.++||++.|.|++.++++.|.+++++.+||
T Consensus 146 ~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~q~ 225 (235)
T cd06434 146 DGGVPCLSGRTAAYRTEILKDFLFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTETPENYKKFLKQQ 225 (235)
T ss_pred CCCEEEccCcHHHHHHHHHhhhhhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEEcchhHHHHHHHh
Confidence 445566789999999999998753322 2478999999999999999999999999999999999999999
Q ss_pred HhhhcchH
Q 009761 321 HRWSCGPA 328 (526)
Q Consensus 321 ~RW~~G~~ 328 (526)
.||.+|..
T Consensus 226 ~Rw~~~~~ 233 (235)
T cd06434 226 LRWSRSNW 233 (235)
T ss_pred hhhhhccc
Confidence 99999964
No 27
>PLN02400 cellulose synthase
Probab=99.97 E-value=7.3e-30 Score=271.80 Aligned_cols=309 Identities=19% Similarity=0.245 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccccc-cccccccc--cCCCCCCcEEEEEecCCCh----HHHHHHHHHHHcCC
Q 009761 45 LSIMLFVERVYMGIVIVLLKLFGRKPEKRYKW-EAIKDDVE--LGNSAYPMVLVQIPMYNEK----EVYQLSIGAACGLS 117 (526)
Q Consensus 45 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~P~VsViIp~yne~----~~l~~~L~sl~~q~ 117 (526)
++++.++..+++++.+++....++.|..+... +...+..+ ..+.++|.|.|+|++-+.. -...+|+-|+++.|
T Consensus 307 ~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~D 386 (1085)
T PLN02400 307 LWLTSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVD 386 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhc
Confidence 34556666777777777777778877665422 11111111 1135699999999997764 37889999999999
Q ss_pred CCCCceEEEEEcC-CCchhHHHHHHHH---------HHHhh---------------------------------------
Q 009761 118 WPSDRITIQVLDD-STDPTIKDLVELE---------CQRWA--------------------------------------- 148 (526)
Q Consensus 118 yp~~~~~I~V~D~-s~D~t~~~l~~~~---------~~~~~--------------------------------------- 148 (526)
||.+++-++|.|| ++.-|.+.+.|.. |+++.
T Consensus 387 YP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~ 466 (1085)
T PLN02400 387 YPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEF 466 (1085)
T ss_pred ccccceEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHH
Confidence 9999999999988 4444444444410 11100
Q ss_pred ---------------c--------------------------------------cCCcEEEEeeCCCCC----CCccHHH
Q 009761 149 ---------------S--------------------------------------KGINIKYEIRDSRNG----YKAGALK 171 (526)
Q Consensus 149 ---------------~--------------------------------------~~~~v~~~~~~~~~g----~K~~aln 171 (526)
+ .-++++|++|++|.| .||||+|
T Consensus 467 k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMN 546 (1085)
T PLN02400 467 KVRINALVAKAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMN 546 (1085)
T ss_pred HHHHHHHHhhhccCCccccccccCccCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhH
Confidence 0 012377888988766 7999999
Q ss_pred HHhhhhcc-cCCcEEEEecCCCCC-ChHHHHHHHhhhhcCC----CEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhh
Q 009761 172 EGMKHSYV-KQCDYVAIFDADFEP-EPDFLWRTIPFLVHNP----DIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQ 245 (526)
Q Consensus 172 ~gl~~a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (526)
..++.+.. .+++||+.+|+|... +|+.+++.+.+|. || ++++||.++++.|.+++- .........|....
T Consensus 547 aLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~l-D~~~g~~~afVQFPQrF~gi~~~D---~Y~n~~~vffdi~~ 622 (1085)
T PLN02400 547 ALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMM-DPAIGKKTCYVQFPQRFDGIDLHD---RYANRNIVFFDINL 622 (1085)
T ss_pred HHHHHhhhhcCCceEEecccccccCCchhHHhhhhhee-ccCCCceeEEEeCCcccCCCCCCC---CcccceeEEeeccc
Confidence 99997643 799999999999665 8999999999884 55 799999999988765431 12223334445555
Q ss_pred hccccCCCcccccccceeeeHHHHHHc-----------------------------------------------------
Q 009761 246 EVGSSTYAFFGFNGTAGVWRISALNEA----------------------------------------------------- 272 (526)
Q Consensus 246 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~----------------------------------------------------- 272 (526)
.+-++.++++ +.|+++++||+++-..
T Consensus 623 ~GldGlqGP~-YvGTGC~frR~aLYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (1085)
T PLN02400 623 KGLDGIQGPV-YVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMED 701 (1085)
T ss_pred cccccCCCcc-ccccCcceeeeeeccCCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5555555554 5677888777766410
Q ss_pred ------------------------------------------------------------------------CCCCCCCc
Q 009761 273 ------------------------------------------------------------------------GGWKDRTT 280 (526)
Q Consensus 273 ------------------------------------------------------------------------gg~~~~~~ 280 (526)
-||-.+++
T Consensus 702 ~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSv 781 (1085)
T PLN02400 702 IEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSV 781 (1085)
T ss_pred cccccccccchhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccce
Confidence 03334557
Q ss_pred cchHHHHHHHHhCCCeEEEec--cccccccCCcChHHHHHHHHhhhcchHHHHHhhcccccc--cCCCChhHHHHHHHHH
Q 009761 281 VEDMDLAVRASLKGWKFVYVG--DLKVKNELPSTFKAYRYQQHRWSCGPANLFKKMVGEIMR--TKKVTLWKKLYVIYSF 356 (526)
Q Consensus 281 ~ED~~l~~rl~~~G~~~~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 356 (526)
+||+.++++++.+|||.+|+. .....+..|.++.+++.||.||+.|.+|++......++. .+++++.|++.|+...
T Consensus 782 TED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~ 861 (1085)
T PLN02400 782 TEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTI 861 (1085)
T ss_pred echHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999995 445589999999999999999999999998754344553 4779999999988655
Q ss_pred HH
Q 009761 357 FF 358 (526)
Q Consensus 357 ~~ 358 (526)
++
T Consensus 862 ~y 863 (1085)
T PLN02400 862 VY 863 (1085)
T ss_pred HH
Confidence 54
No 28
>PLN02436 cellulose synthase A
Probab=99.97 E-value=4.1e-29 Score=264.92 Aligned_cols=394 Identities=21% Similarity=0.294 Sum_probs=253.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccc-cccccccc--cCCCCCCcEEEEEecCCCh----HHHHHHHHHHHcCCC
Q 009761 46 SIMLFVERVYMGIVIVLLKLFGRKPEKRYKW-EAIKDDVE--LGNSAYPMVLVQIPMYNEK----EVYQLSIGAACGLSW 118 (526)
Q Consensus 46 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~P~VsViIp~yne~----~~l~~~L~sl~~q~y 118 (526)
+++.++..+++++.+++....++.|..+... +...+..+ ..+.++|.|.|+|++-+.. -...+|+-|+++.||
T Consensus 317 Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DY 396 (1094)
T PLN02436 317 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDY 396 (1094)
T ss_pred HHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcc
Confidence 4556666777777777777778877665322 11111111 1235699999999997764 378899999999999
Q ss_pred CCCceEEEEEcCC-CchhHHHHHHHH------------------------------------------------------
Q 009761 119 PSDRITIQVLDDS-TDPTIKDLVELE------------------------------------------------------ 143 (526)
Q Consensus 119 p~~~~~I~V~D~s-~D~t~~~l~~~~------------------------------------------------------ 143 (526)
|.+++-++|.||+ +.-|.+.+.|..
T Consensus 397 P~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K 476 (1094)
T PLN02436 397 PVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFK 476 (1094)
T ss_pred cccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHH
Confidence 9999999999884 334444333310
Q ss_pred ------HHH--------h--h-----------c--------------------cCCcEEEEeeCCCCC----CCccHHHH
Q 009761 144 ------CQR--------W--A-----------S--------------------KGINIKYEIRDSRNG----YKAGALKE 172 (526)
Q Consensus 144 ------~~~--------~--~-----------~--------------------~~~~v~~~~~~~~~g----~K~~aln~ 172 (526)
.+. + . + .-++++|++|+++.| .||||+|.
T Consensus 477 ~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNa 556 (1094)
T PLN02436 477 VKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNS 556 (1094)
T ss_pred HHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhh
Confidence 000 0 0 0 012377888888765 79999999
Q ss_pred Hhhhhcc-cCCcEEEEecCCC-CCChHHHHHHHhhhhcCC----CEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhh
Q 009761 173 GMKHSYV-KQCDYVAIFDADF-EPEPDFLWRTIPFLVHNP----DIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQE 246 (526)
Q Consensus 173 gl~~a~~-~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (526)
.++.+.. .+++||+.+|+|. +.+|+.+++.+.+|. || ++++||.++++.|.+++- .........|.....
T Consensus 557 LlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfll-D~~~g~~~afVQFPQrF~gi~k~D---~Y~n~~~vffdi~~~ 632 (1094)
T PLN02436 557 LIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMM-DPQSGKKICYVQFPQRFDGIDRHD---RYSNRNVVFFDINMK 632 (1094)
T ss_pred hhhhheeecCCceEEecccccccCchHHHHHhhhhhc-CCccCCeeEEEcCCcccCCCCCCC---cccccceEeeecccc
Confidence 9998755 7999999999996 778999999999984 66 899999999998776541 122223334445555
Q ss_pred ccccCCCcccccccceeeeHHHHHHcC-----------------------------------------------------
Q 009761 247 VGSSTYAFFGFNGTAGVWRISALNEAG----------------------------------------------------- 273 (526)
Q Consensus 247 ~~~~~~~~~~~~G~~~~~Rr~~l~~~g----------------------------------------------------- 273 (526)
+-++.+++. +.|+++++||+++-...
T Consensus 633 GlDGlqGP~-YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (1094)
T PLN02436 633 GLDGIQGPI-YVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALE 711 (1094)
T ss_pred ccccCCCcc-ccccCceeeeeeeeccCCcccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 555555554 55777777776553110
Q ss_pred --------------------------------------------------------------------------CCCCCC
Q 009761 274 --------------------------------------------------------------------------GWKDRT 279 (526)
Q Consensus 274 --------------------------------------------------------------------------g~~~~~ 279 (526)
||-.++
T Consensus 712 ~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGS 791 (1094)
T PLN02436 712 NIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGS 791 (1094)
T ss_pred ccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccc
Confidence 344455
Q ss_pred ccchHHHHHHHHhCCCeEEEe-cccc-ccccCCcChHHHHHHHHhhhcchHHHHHhhccccc--ccCCCChhHHHHHHHH
Q 009761 280 TVEDMDLAVRASLKGWKFVYV-GDLK-VKNELPSTFKAYRYQQHRWSCGPANLFKKMVGEIM--RTKKVTLWKKLYVIYS 355 (526)
Q Consensus 280 ~~ED~~l~~rl~~~G~~~~~~-~~~~-~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 355 (526)
++||+..+++++.+|||.+|+ |+.. ..+..|.++.+++.||.||+.|.+|++......++ ..+++++.|++.|+..
T Consensus 792 vTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~ 871 (1094)
T PLN02436 792 VTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINS 871 (1094)
T ss_pred eecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHH
Confidence 799999999999999999998 5443 46999999999999999999999999765334444 2457999999998865
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC------CchhhHHHHHHHHHHHHH-----HHHh----ccchhhHHHHHHHHH
Q 009761 356 FFFVRKVVAHIVTFVFYCVLLPATVLFP------EVEVPKWGAVYIPSIITL-----LNAV----GTPRSLHLLVFWILF 420 (526)
Q Consensus 356 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~ 420 (526)
.++. +..+.. +.| +++|+.+++. ....+ |..+++..++.+ +-.. ....+|..-.+|++-
T Consensus 872 ~ly~---l~Slp~-liY-~~lP~l~LL~G~~i~P~vs~~-~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~ 945 (1094)
T PLN02436 872 VVYP---WTSIPL-IVY-CTLPAICLLTGKFIVPEISNY-ASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIG 945 (1094)
T ss_pred HHHH---HHHHHH-HHH-HHHHHHHHHcCCeecCccchH-HHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHH
Confidence 5442 112211 222 3456555442 22222 111122111111 1111 122334445566543
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCCcceEEecccCC
Q 009761 421 ENVMSLHRTKATFIGLLEA--GRVNEWVVTEKLGD 453 (526)
Q Consensus 421 ~~~~~~~~~~a~~~~l~~~--~~~~~w~~T~K~~~ 453 (526)
... ..+.|++.++++. +++..|.+|+|..+
T Consensus 946 ~tS---a~Lfavl~~iLKvLggs~~~F~VTsK~~d 977 (1094)
T PLN02436 946 GVS---SHLFALFQGLLKVLAGVNTNFTVTSKAAD 977 (1094)
T ss_pred HHH---HHHHHHHHHHHHHhccCcccceecccccc
Confidence 221 1223444555543 78999999999654
No 29
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.97 E-value=1.1e-28 Score=250.69 Aligned_cols=231 Identities=19% Similarity=0.202 Sum_probs=165.9
Q ss_pred CCCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC---CC
Q 009761 87 NSAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS---RN 163 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~---~~ 163 (526)
++..|+|||+||+|||++.+++||+|+.+|+||++.++|+|+|+|+|+|.+ ++++..++++. ..++++++.++ ..
T Consensus 36 ~~~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~-i~~~~~~~~~~-~~~i~vi~~~~~~~g~ 113 (384)
T TIGR03469 36 PEAWPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTAD-IARAAARAYGR-GDRLTVVSGQPLPPGW 113 (384)
T ss_pred CCCCCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHH-HHHHHHHhcCC-CCcEEEecCCCCCCCC
Confidence 457899999999999999999999999999999544455566779999877 66665554321 13677765322 23
Q ss_pred CCCccHHHHHhhhhcccC-----CcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhh
Q 009761 164 GYKAGALKEGMKHSYVKQ-----CDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLD 238 (526)
Q Consensus 164 g~K~~aln~gl~~a~~~~-----~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~ 238 (526)
+||+.|+|.|++++ + +|+++++|+|+.++||+++++++.++ ++++++|++...... .+...+.....+.
T Consensus 114 ~Gk~~A~n~g~~~A---~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~-~~~~~~vs~~~~~~~--~~~~~~~~~~~~~ 187 (384)
T TIGR03469 114 SGKLWAVSQGIAAA---RTLAPPADYLLLTDADIAHGPDNLARLVARAR-AEGLDLVSLMVRLRC--ESFWEKLLIPAFV 187 (384)
T ss_pred cchHHHHHHHHHHH---hccCCCCCEEEEECCCCCCChhHHHHHHHHHH-hCCCCEEEecccccC--CCHHHHHHHHHHH
Confidence 47999999999999 6 99999999999999999999999984 556777777655433 2332221111111
Q ss_pred hhhhh---hhhccccCCCcccccccceeeeHHHHHHcCCCCC--CCccchHHHHHHHHhCCCeEEEeccccccc-cCCcC
Q 009761 239 YHFTV---EQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKD--RTTVEDMDLAVRASLKGWKFVYVGDLKVKN-ELPST 312 (526)
Q Consensus 239 ~~~~~---~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~--~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~-~~p~t 312 (526)
..+.. ...............|+++++||++++++|||++ ..+.||.+++.+++++|+++.+.+...... ..-.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~~~~s~r~~~~ 267 (384)
T TIGR03469 188 FFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALERIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAARTRSLRPYDG 267 (384)
T ss_pred HHHHHhcchhhhcCCCccceeecceEEEEEHHHHHHcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecCceEEEEecCC
Confidence 10100 0001111122233569999999999999999987 458899999999999999999987655433 44458
Q ss_pred hHHHHHHHHhhhc
Q 009761 313 FKAYRYQQHRWSC 325 (526)
Q Consensus 313 ~~~~~~Qr~RW~~ 325 (526)
+++..+|+.||..
T Consensus 268 ~~~~~~~~~r~~~ 280 (384)
T TIGR03469 268 LGEIWRMIARTAY 280 (384)
T ss_pred HHHHHHHHHHhHH
Confidence 8889999888854
No 30
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=99.97 E-value=1.3e-28 Score=261.60 Aligned_cols=308 Identities=19% Similarity=0.274 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccc-cccccccc--cCCCCCCcEEEEEecCCCh----HHHHHHHHHHHcCCC
Q 009761 46 SIMLFVERVYMGIVIVLLKLFGRKPEKRYKW-EAIKDDVE--LGNSAYPMVLVQIPMYNEK----EVYQLSIGAACGLSW 118 (526)
Q Consensus 46 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~P~VsViIp~yne~----~~l~~~L~sl~~q~y 118 (526)
+++.++..+++++.+++....++.|..+... +......+ ..+.++|.|.|+|++-+.. -...+|+-|+++.||
T Consensus 239 Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DY 318 (1044)
T PLN02915 239 WLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDY 318 (1044)
T ss_pred HHHHHHHHHHHHHHHHHccCccccccccccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcc
Confidence 4556666777777777777778877665322 11111101 1134599999999997764 378899999999999
Q ss_pred CCCceEEEEEcC-CCchhHHHHHHHH---------HHHh-------------------------------------h---
Q 009761 119 PSDRITIQVLDD-STDPTIKDLVELE---------CQRW-------------------------------------A--- 148 (526)
Q Consensus 119 p~~~~~I~V~D~-s~D~t~~~l~~~~---------~~~~-------------------------------------~--- 148 (526)
|.+++-++|.|| ++.-|.+.+.|.. |+++ .
T Consensus 319 P~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K 398 (1044)
T PLN02915 319 PVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFK 398 (1044)
T ss_pred cccceeEEEecCCchHhHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHH
Confidence 999999999988 4444544444410 1100 0
Q ss_pred --------------c--------------------------------------cCCcEEEEeeCCCCC----CCccHHHH
Q 009761 149 --------------S--------------------------------------KGINIKYEIRDSRNG----YKAGALKE 172 (526)
Q Consensus 149 --------------~--------------------------------------~~~~v~~~~~~~~~g----~K~~aln~ 172 (526)
+ .-++++|++|++|.| .||||+|.
T Consensus 399 ~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNa 478 (1044)
T PLN02915 399 VRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNA 478 (1044)
T ss_pred HHHHHHHhhhccCCcccccccCCccCCCCCCCCCccceEEeecCCCCcccccCccceeEEEecccCCCCCcchhhhhhhh
Confidence 0 012277888888765 79999999
Q ss_pred Hhhhhcc-cCCcEEEEecCCC-CCChHHHHHHHhhhhcCC----CEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhh
Q 009761 173 GMKHSYV-KQCDYVAIFDADF-EPEPDFLWRTIPFLVHNP----DIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQE 246 (526)
Q Consensus 173 gl~~a~~-~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (526)
.++.+.. .+++||+.+|+|. +-+|+.+++.+.+|. || ++++||.++++.|.+++- .........|.....
T Consensus 479 LlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~l-D~~~g~~~afVQFPQrF~gidk~D---~Y~n~~~Vffdi~~~ 554 (1044)
T PLN02915 479 LVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLM-DPQLGKKLCYVQFPQRFDGIDRHD---RYANRNVVFFDINMK 554 (1044)
T ss_pred HhhhhheeecCcEEEeeccccccCcchhhHhhceeee-cCCCCCeeEEEeCCcccCCCCCCC---CcCccceEEEeeecc
Confidence 9998754 7999999999995 558999999999884 55 799999999988765431 111122223333333
Q ss_pred ccccCCCcccccccceeeeHHHHH--------------------------------------------------------
Q 009761 247 VGSSTYAFFGFNGTAGVWRISALN-------------------------------------------------------- 270 (526)
Q Consensus 247 ~~~~~~~~~~~~G~~~~~Rr~~l~-------------------------------------------------------- 270 (526)
+-++.+++. +.|+++++||+++-
T Consensus 555 GldGlqGP~-YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (1044)
T PLN02915 555 GLDGIQGPV-YVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKK 633 (1044)
T ss_pred cccccCCcc-cccCCceeeeeeecCcCCcccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 333444333 34555555554432
Q ss_pred --------------------------------------------------------------------------------
Q 009761 271 -------------------------------------------------------------------------------- 270 (526)
Q Consensus 271 -------------------------------------------------------------------------------- 270 (526)
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~ 713 (1044)
T PLN02915 634 KGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPEGTNPAALIK 713 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCCCCCCCcHHHHH
Confidence
Q ss_pred Hc-----------------CCCCCCCccchHHHHHHHHhCCCeEEEec-cc-cccccCCcChHHHHHHHHhhhcchHHHH
Q 009761 271 EA-----------------GGWKDRTTVEDMDLAVRASLKGWKFVYVG-DL-KVKNELPSTFKAYRYQQHRWSCGPANLF 331 (526)
Q Consensus 271 ~~-----------------gg~~~~~~~ED~~l~~rl~~~G~~~~~~~-~~-~~~~~~p~t~~~~~~Qr~RW~~G~~~~~ 331 (526)
+. -||..++++||+..+++++.+|||.+|+. +. ...+..|.++.+++.||.||+.|.+|++
T Consensus 714 eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf 793 (1044)
T PLN02915 714 EAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 793 (1044)
T ss_pred HHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHH
Confidence 10 04555568999999999999999999994 32 3369999999999999999999999998
Q ss_pred Hhhcccccc--cCCCChhHHHHHHHHHHH
Q 009761 332 KKMVGEIMR--TKKVTLWKKLYVIYSFFF 358 (526)
Q Consensus 332 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 358 (526)
.+....++. .+++++.|++.|+...++
T Consensus 794 ~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~y 822 (1044)
T PLN02915 794 MSRHCPLWYAYGGKLKWLERLAYINTIVY 822 (1044)
T ss_pred HhccCCcccccCCCCCHHHHHHHHHHHHH
Confidence 865445553 468999999998765443
No 31
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.97 E-value=2e-29 Score=256.38 Aligned_cols=361 Identities=16% Similarity=0.219 Sum_probs=232.5
Q ss_pred CCCcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCc-eEEEEEcC-----CCchhHHHHHHHHHHHh--------------
Q 009761 89 AYPMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDR-ITIQVLDD-----STDPTIKDLVELECQRW-------------- 147 (526)
Q Consensus 89 ~~P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~-~~I~V~D~-----s~D~t~~~l~~~~~~~~-------------- 147 (526)
..+.+-.+||||||. +.++++|+|+..++||+.+ ++++|+|| ++|.+..+++-....+.
T Consensus 23 ~~~~~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l~~~~~~~~~~~~~~~~~~~~ 102 (527)
T PF03142_consen 23 PDKFVICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTPEIVLDILGDFVDPPEDPEPLSYVS 102 (527)
T ss_pred CCceEEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChHHHHHHhhcccCCCcCCCCCcceEE
Confidence 345688899999998 8999999999999999874 55667786 34433333443332200
Q ss_pred ------------------hccC-----------CcEEEEee----------CCCCCCCccHHHHHhhhh-----------
Q 009761 148 ------------------ASKG-----------INIKYEIR----------DSRNGYKAGALKEGMKHS----------- 177 (526)
Q Consensus 148 ------------------~~~~-----------~~v~~~~~----------~~~~g~K~~aln~gl~~a----------- 177 (526)
...+ +...++.. +..|.||...+-..+...
T Consensus 103 ~~~g~~~~n~~~vy~g~y~~~~~~~~~~~~~~~vp~~~vvk~g~~~e~~~~k~~NrGKRDsq~~~~~fl~~~~~~~~~~~ 182 (527)
T PF03142_consen 103 LGEGSKQHNMAKVYSGFYEYDGDSHVPPEKQQRVPYIVVVKCGTPSERSSPKPGNRGKRDSQILLMSFLNKVHFNNPMTP 182 (527)
T ss_pred eccCchhhcCEEEEEEEEecCCccccccccccccCEEEEEEcCChHHhcccccccCCchHHHHHHHHHHHHHhcCCCCch
Confidence 0011 22223322 233445777753221111
Q ss_pred ---------------cccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhh
Q 009761 178 ---------------YVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFT 242 (526)
Q Consensus 178 ---------------~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (526)
..+..||++.+|||+.++||.+.+++..+++||++++|+|.....|...++++..|.++|...|.
T Consensus 183 ~~~e~~~~i~~~~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish~ 262 (527)
T PF03142_consen 183 LELELFHQIWNIIGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCGETRIDNKGQSWWTMYQVFEYAISHH 262 (527)
T ss_pred HHHHHHHHHHHHhccCccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEeceeEEcCCCCCHhhheeccchhHHHH
Confidence 01467999999999999999999999999999999999999988899899999999999999999
Q ss_pred hhhhccccCCCcccccccceeeeHHHHHHcC--------------CCCC-----------CCccchHHHHHHHHhC--CC
Q 009761 243 VEQEVGSSTYAFFGFNGTAGVWRISALNEAG--------------GWKD-----------RTTVEDMDLAVRASLK--GW 295 (526)
Q Consensus 243 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~g--------------g~~~-----------~~~~ED~~l~~rl~~~--G~ 295 (526)
..+..++..+.+.|++|++.++|-++.+.-. ++.+ ..++||..++..+.++ ||
T Consensus 263 l~Ka~Es~fG~VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~~~dtlh~~nl~~lGEDR~LttLlLk~~~~~ 342 (527)
T PF03142_consen 263 LQKAFESVFGSVTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSENPVDTLHQKNLLDLGEDRWLTTLLLKQFPGY 342 (527)
T ss_pred HHHHHHHHhCceeecCCcceeeeeehhccccccccccccchHHHHHHhhccchHHHHHhhhhcchhHHHHHHHHhhCCCc
Confidence 9999999999999999999999998877511 1111 1288999999888877 89
Q ss_pred eEEEeccccccccCCcChHHHHHHHHhhhcchHHHHHhhc--ccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009761 296 KFVYVGDLKVKNELPSTFKAYRYQQHRWSCGPANLFKKMV--GEIMRTKKVTLWKKLYVIYSFFFVRKVVAHIVTFVFYC 373 (526)
Q Consensus 296 ~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 373 (526)
|+.|+|++.+++..|++++.+++||+||..|.+..+.... +++... ..+..++-.+ .-++..++.|....+...
T Consensus 343 k~~y~~~A~a~T~aP~t~~vflsQRRRWinSTi~Nl~eLl~~~~l~g~--~~fsm~fvvf--i~Li~tiI~P~ti~~iIy 418 (527)
T PF03142_consen 343 KTEYVPSAVAYTDAPETFSVFLSQRRRWINSTIHNLFELLLVRDLCGF--CCFSMRFVVF--IDLIGTIILPATIVFIIY 418 (527)
T ss_pred eEEEcccccccccCCccHHHHHHHhhhccchhHhhHhHHHHhhhhcce--eeecHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999985432211 111111 1111121111 112222333322211111
Q ss_pred HHHHHHhhcCCchhhHHHHHHHHHHHHH--HHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeccc
Q 009761 374 VLLPATVLFPEVEVPKWGAVYIPSIITL--LNAVGTPRSLHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWVVTEKL 451 (526)
Q Consensus 374 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~w~~T~K~ 451 (526)
+ +...+ ......+.+.+.+++.+..+ +..+.+.+.+.......++.....+++..-.+++++.. .+.+|+.|.++
T Consensus 419 l-Iv~~I-~~s~~~piIsLiLLAiIyGL~aIl~iL~~r~wq~i~wmiiYll~~P~~n~vLpiYSfwn~-DDFSWGtTR~v 495 (527)
T PF03142_consen 419 L-IVVSI-FSSDPVPIISLILLAIIYGLPAILFILRSRRWQYIGWMIIYLLALPFFNFVLPIYSFWNF-DDFSWGTTRVV 495 (527)
T ss_pred H-hheeh-cccccccchHHHHHHHHHHHHhhhheecccHHHHHHHHHHHHHHHHHHHhHhhheeEEEe-cccccCCeeee
Confidence 0 11111 11112222222233322222 11223334444433333455555566666677788875 67899999987
Q ss_pred CCccc
Q 009761 452 GDVKS 456 (526)
Q Consensus 452 ~~~~~ 456 (526)
..+.+
T Consensus 496 ~ge~~ 500 (527)
T PF03142_consen 496 VGEKG 500 (527)
T ss_pred ccccc
Confidence 66544
No 32
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.97 E-value=1.9e-29 Score=238.85 Aligned_cols=222 Identities=21% Similarity=0.311 Sum_probs=167.3
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEE-EEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC-CCCCCccHHHH
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQ-VLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS-RNGYKAGALKE 172 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~-~~g~K~~aln~ 172 (526)
|+||+|||++.+++||+|+++|+||++..+|+ |+|+|+|++.+ +++ .... ..+.+++++..+. .+.||+.++|.
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~-~~~-~~~~--~~~~~v~~~~~~~~~~~g~~~a~n~ 76 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQ-ILE-FAAA--KPNFQLKILNNSRVSISGKKNALTT 76 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHH-HHH-HHHh--CCCcceEEeeccCcccchhHHHHHH
Confidence 68999999999999999999999998554444 45557787766 444 2222 2245676664442 35579999999
Q ss_pred HhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCC
Q 009761 173 GMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTY 252 (526)
Q Consensus 173 gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (526)
|++.+ ++||++++|+|+.++||+|++++..+ .+++.+++++..... ...++.................. ....+
T Consensus 77 g~~~~---~~d~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 150 (229)
T cd04192 77 AIKAA---KGDWIVTTDADCVVPSNWLLTFVAFI-QKEQIGLVAGPVIYF-KGKSLLAKFQRLDWLSLLGLIAG-SFGLG 150 (229)
T ss_pred HHHHh---cCCEEEEECCCcccCHHHHHHHHHHh-hcCCCcEEeeeeeec-CCccHHHHHHHHHHHHHHHHHhh-HHHhc
Confidence 99999 99999999999999999999999988 456677777776654 33455555544333222111111 11122
Q ss_pred CcccccccceeeeHHHHHHcCCCCCC--CccchHHHHHHHHhCCC-eEEEe--ccccccccCCcChHHHHHHHHhhhcc
Q 009761 253 AFFGFNGTAGVWRISALNEAGGWKDR--TTVEDMDLAVRASLKGW-KFVYV--GDLKVKNELPSTFKAYRYQQHRWSCG 326 (526)
Q Consensus 253 ~~~~~~G~~~~~Rr~~l~~~gg~~~~--~~~ED~~l~~rl~~~G~-~~~~~--~~~~~~~~~p~t~~~~~~Qr~RW~~G 326 (526)
.....+|+++++||++++++|||++. ...||.+++.++.++|+ ++.+. |++.++++.|.+++++.+||.||++|
T Consensus 151 ~~~~~~g~~~~~rr~~~~~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 151 KPFMCNGANMAYRKEAFFEVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred CccccccceEEEEHHHHHHhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 23335699999999999999999874 46799999999999999 88887 56777899999999999999999987
No 33
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.97 E-value=1.9e-29 Score=242.53 Aligned_cols=225 Identities=22% Similarity=0.275 Sum_probs=173.4
Q ss_pred CCCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEE-EEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCC
Q 009761 87 NSAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQ-VLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGY 165 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~-V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 165 (526)
.+..|++||+||+|||++.++++|+|+.+|+||+++.+|+ |+|+|+|++.+ ++++..++ +++++.. +++.|
T Consensus 25 ~~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~-~~~~~~~~------~v~~i~~-~~~~g 96 (251)
T cd06439 25 PAYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAE-IAREYADK------GVKLLRF-PERRG 96 (251)
T ss_pred CCCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHH-HHHHHhhC------cEEEEEc-CCCCC
Confidence 4567899999999999999999999999999998644444 55667887766 55544221 4666644 44556
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhh
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQ 245 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (526)
|++|+|.|++.+ ++|+++++|+|+.++|+++++++..+ ++++++++++.....+.+. ............ ....
T Consensus 97 ~~~a~n~gi~~a---~~d~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~-~~~~ 169 (251)
T cd06439 97 KAAALNRALALA---TGEIVVFTDANALLDPDALRLLVRHF-ADPSVGAVSGELVIVDGGG--SGSGEGLYWKYE-NWLK 169 (251)
T ss_pred hHHHHHHHHHHc---CCCEEEEEccccCcCHHHHHHHHHHh-cCCCccEEEeEEEecCCcc--cchhHHHHHHHH-HHHH
Confidence 999999999999 89999999999999999999999999 5889999999887765532 111111100110 0011
Q ss_pred hccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhc
Q 009761 246 EVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSC 325 (526)
Q Consensus 246 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~ 325 (526)
............+|+++++||++++ ++++....||.+++.++.++|+++.+.|++.+++..|.+.+++.+|+.||+.
T Consensus 170 ~~~~~~~~~~~~~g~~~~~rr~~~~---~~~~~~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 246 (251)
T cd06439 170 RAESRLGSTVGANGAIYAIRRELFR---PLPADTINDDFVLPLRIARQGYRVVYEPDAVAYEEVAEDGSEEFRRRVRIAA 246 (251)
T ss_pred HHHHhcCCeeeecchHHHhHHHHhc---CCCcccchhHHHHHHHHHHcCCeEEeccccEEEEeCcccHHHHHHHHHHHHh
Confidence 1111222334467888899999998 6777778999999999999999999999999999999999999999999999
Q ss_pred chHH
Q 009761 326 GPAN 329 (526)
Q Consensus 326 G~~~ 329 (526)
|++|
T Consensus 247 g~~~ 250 (251)
T cd06439 247 GNLQ 250 (251)
T ss_pred cccc
Confidence 9876
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=3.4e-26 Score=222.90 Aligned_cols=348 Identities=21% Similarity=0.268 Sum_probs=243.2
Q ss_pred CcEEEEEecCCCh-----HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHH-----HHHHhhccCCcEEEEeeC
Q 009761 91 PMVLVQIPMYNEK-----EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVEL-----ECQRWASKGINIKYEIRD 160 (526)
Q Consensus 91 P~VsViIp~yne~-----~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~-----~~~~~~~~~~~v~~~~~~ 160 (526)
-+..|++|+|||+ ..++.+-+|+.+...- +.+.++|..||.|+.+. +.|+ .|++... ..++.|..|.
T Consensus 144 hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~-~~FD~FVLSDs~dpdia-lAEq~a~~~l~~e~~g-~~~ifYRrRr 220 (736)
T COG2943 144 HRTAILMPIYNEDVNRVFAGLRATYESLAATGHA-EHFDFFVLSDSRDPDIA-LAEQKAWAELCRELGG-EGNIFYRRRR 220 (736)
T ss_pred cceeEEeeccccCHHHHHHHHHHHHHHHHhhCCc-ccceEEEEcCCCCchhh-hhHHHHHHHHHHHhCC-CCceeeehHh
Confidence 4589999999999 3578888888876543 46788999999998876 4443 3555422 3578888888
Q ss_pred CCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhh
Q 009761 161 SRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYH 240 (526)
Q Consensus 161 ~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (526)
+|.+.|+||+..-.+. ++..++|.+++|||++..+|++.++++.||.||++|.+|+.....|. .+++.|+|++.-...
T Consensus 221 ~n~~RKaGNIaDfcrR-wG~~Y~~MlVLDADSvMtgd~lvrLv~~ME~~P~aGlIQt~P~~~gg-~TL~AR~qQFatrvY 298 (736)
T COG2943 221 RNVKRKAGNIADFCRR-WGSAYSYMLVLDADSVMTGDCLVRLVRLMEANPDAGLIQTSPKASGG-DTLYARCQQFATRVY 298 (736)
T ss_pred hhhcccccCHHHHHHH-hCcccceEEEeecccccCchHHHHHHHHHhhCCCCceeecchhhcCc-chHHHHHHHHHHHHh
Confidence 8888899999999887 56689999999999999999999999999999999999999988887 678899888753322
Q ss_pred hhhhhhc-cccCCCcccccccceeeeHHHHHHcCCCCC---------CCccchHHHHHHHHhCCCeEEEeccccc-cccC
Q 009761 241 FTVEQEV-GSSTYAFFGFNGTAGVWRISALNEAGGWKD---------RTTVEDMDLAVRASLKGWKFVYVGDLKV-KNEL 309 (526)
Q Consensus 241 ~~~~~~~-~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~---------~~~~ED~~l~~rl~~~G~~~~~~~~~~~-~~~~ 309 (526)
-.....+ .-...+-..+.|+|.++|.+++.+..|.+. ..+..|+--+..+++.||.+...++... |+|.
T Consensus 299 Gpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmRRaGW~v~ia~dL~GSyEE~ 378 (736)
T COG2943 299 GPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWIAYDLDGSYEEL 378 (736)
T ss_pred chHHhhhhHHHhccccccccccceeechhhHHhcCCCCCCCCCCCCccccchHHHHHHHHhhcCceEEEeccCCCchhhC
Confidence 1111000 001112233679999999999998755443 4477899999999999999999888765 7999
Q ss_pred CcChHHHHHHHHhhhcchHHHHHhhcccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--------HHHh
Q 009761 310 PSTFKAYRYQQHRWSCGPANLFKKMVGEIMRTKKVTLWKKLYVIYSFFFVRKVVAHIVTFVFYCVL-L--------PATV 380 (526)
Q Consensus 310 p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~--------~~~~ 380 (526)
|+++-++.++-+||++|++|.+ +++..+++++..|.+++.+... ++.+|+..++...-. + |..+
T Consensus 379 PpnLlD~l~RDRRWC~GNLqh~-----rl~~~~GlHwvsR~h~~tGVms--YlsaPlWfl~ll~g~al~~~~~l~~p~yF 451 (736)
T COG2943 379 PPNLLDELKRDRRWCHGNLQHF-----RLFLVKGLHWVSRAHFLTGVMS--YLSAPLWFLFLLLGTALQAVHALTEPQYF 451 (736)
T ss_pred CchHHHHHhhhhHhhhcchhhc-----eeeccCCccHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHhHhhhchhhh
Confidence 9999999999999999999976 3566788999999998765432 233444333221111 1 1111
Q ss_pred hcCC--c-hhh-------H------HHHHHHHHHHHHHHHhcc---chh----hHH-------HHHHHHHHHHHHHHHHH
Q 009761 381 LFPE--V-EVP-------K------WGAVYIPSIITLLNAVGT---PRS----LHL-------LVFWILFENVMSLHRTK 430 (526)
Q Consensus 381 l~~~--~-~~~-------~------~~~~~~~~~~~~~~~~~~---~~~----~~~-------~~~~~~~~~~~~~~~~~ 430 (526)
.-|. + .++ . +..+++|-++.++..+.. .|. ++. ..+..+..+++.+....
T Consensus 452 t~p~qlfp~wp~~~~~~a~~lf~~Tm~lLf~PKil~~~ll~~k~~~~k~~GG~~Rv~ls~~lE~llSaL~APv~Ml~htr 531 (736)
T COG2943 452 TQPRQLFPVWPQWRPELAIALFAITMVLLFLPKLLSILLLWAKKGGTKEFGGALRVTLSLLLEVLLSALLAPVRMLFHTR 531 (736)
T ss_pred cChHhhcCCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1110 0 011 1 122345555544433322 111 111 11222455666677888
Q ss_pred HHHHHHHhcCCCcceEEecccC
Q 009761 431 ATFIGLLEAGRVNEWVVTEKLG 452 (526)
Q Consensus 431 a~~~~l~~~~~~~~w~~T~K~~ 452 (526)
++++.++ |++..|...++..
T Consensus 532 ~Vv~~l~--G~~~gW~sq~RDd 551 (736)
T COG2943 532 FVVSALL--GWDVGWNSQQRDD 551 (736)
T ss_pred HHHHHHh--ccccCcCCCCCCC
Confidence 9999999 8899999888733
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.96 E-value=5.8e-28 Score=231.66 Aligned_cols=230 Identities=20% Similarity=0.239 Sum_probs=172.2
Q ss_pred cEEEEEecCCChHHHHHHHHHHHcCCCCCCce-EEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHH
Q 009761 92 MVLVQIPMYNEKEVYQLSIGAACGLSWPSDRI-TIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGAL 170 (526)
Q Consensus 92 ~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~-~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~al 170 (526)
++||+||+|||++.+.++|+|+.+|+||.... +|+|+|+|+|++.+ ..+...++ ...++++.. + ++|+++|+
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~-~~~~~~~~----~~~v~~i~~-~-~~~~~~a~ 73 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTRE-IVQEYAAK----DPRIRLIDN-P-KRIQSAGL 73 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHH-HHHHHHhc----CCeEEEEeC-C-CCCchHHH
Confidence 48999999999999999999999999973333 34455667887766 55544333 355777743 3 34589999
Q ss_pred HHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhh--cc
Q 009761 171 KEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQE--VG 248 (526)
Q Consensus 171 n~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 248 (526)
|.|++.+ ++||++++|+|+.++|++++++++.+ ++++.+++++.....+.+. ............+..... ..
T Consensus 74 N~g~~~a---~~d~v~~lD~D~~~~~~~l~~~~~~~-~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 147 (249)
T cd02525 74 NIGIRNS---RGDIIIRVDAHAVYPKDYILELVEAL-KRTGADNVGGPMETIGESK--FQKAIAVAQSSPLGSGGSAYRG 147 (249)
T ss_pred HHHHHHh---CCCEEEEECCCccCCHHHHHHHHHHH-hcCCCCEEecceecCCCCh--HHHHHHHHhhchhccCCccccc
Confidence 9999999 99999999999999999999999987 5677788877765433321 111111111111111100 00
Q ss_pred ccCCCcccccccceeeeHHHHHHcCCCCCCC-ccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcch
Q 009761 249 SSTYAFFGFNGTAGVWRISALNEAGGWKDRT-TVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCGP 327 (526)
Q Consensus 249 ~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~-~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~ 327 (526)
..........|+++++||++++++|+|++.. ..||.+++.|+.++|+++.+.|++.+.+..+.+++++.+|+.||.+|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~~s~~~~~~~~~r~~~~~ 227 (249)
T cd02525 148 GAVKIGYVDTVHHGAYRREVFEKVGGFDESLVRNEDAELNYRLRKAGYKIWLSPDIRVYYYPRSTLKKLARQYFRYGKWR 227 (249)
T ss_pred cccccccccccccceEEHHHHHHhCCCCcccCccchhHHHHHHHHcCcEEEEcCCeEEEEcCCCCHHHHHHHHHHHhhhh
Confidence 0111022356888999999999999999853 579999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh
Q 009761 328 ANLFKKM 334 (526)
Q Consensus 328 ~~~~~~~ 334 (526)
.+.++++
T Consensus 228 ~~~~~~~ 234 (249)
T cd02525 228 ARTLRKH 234 (249)
T ss_pred HHHHHhC
Confidence 9998876
No 36
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=99.95 E-value=3.7e-26 Score=235.98 Aligned_cols=287 Identities=22% Similarity=0.383 Sum_probs=190.8
Q ss_pred EEEEeeCCCCC----CCccHHHHHhhhhcc-cCCcEEEEecCCC-CCChHHHHHHHhhhhcCCC----EEEEeeEEEEec
Q 009761 154 IKYEIRDSRNG----YKAGALKEGMKHSYV-KQCDYVAIFDADF-EPEPDFLWRTIPFLVHNPD----IALVQARWKFVN 223 (526)
Q Consensus 154 v~~~~~~~~~g----~K~~aln~gl~~a~~-~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~----v~~V~~~~~~~~ 223 (526)
++|++|+++.+ .||||+|..++.+.. .++++|+.+|+|. ..+|+.+++.+.+| -||+ ++.||.++++.|
T Consensus 168 lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~-~d~~~g~~~~~vQfpq~f~~ 246 (720)
T PF03552_consen 168 LVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFF-MDPKIGKKIAFVQFPQRFDG 246 (720)
T ss_pred EEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhh-ccCCCCCeeEEEeCCceeCC
Confidence 77888888765 799999999987644 7999999999996 66899999999998 5665 999999999987
Q ss_pred CCCcHHHHHHHHhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcC------------------------------
Q 009761 224 ADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAG------------------------------ 273 (526)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~g------------------------------ 273 (526)
.+++- .........+.....+-++.+++. +.|+++++||+++...+
T Consensus 247 i~~~d---~y~~~~~~~~~~~~~g~dG~~gp~-y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~ 322 (720)
T PF03552_consen 247 IDKND---RYGNQNRVFFDINMRGLDGLQGPF-YVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKK 322 (720)
T ss_pred CCcCC---CCCccceeeeeccccccccCCCce-eeecCcceechhhhCCCCCchhcccCcceeeeecccCCccccccccc
Confidence 65431 122223334455555556666554 67888888888864310
Q ss_pred --------------------------------------------------------------------------------
Q 009761 274 -------------------------------------------------------------------------------- 273 (526)
Q Consensus 274 -------------------------------------------------------------------------------- 273 (526)
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~EA~~V~s 402 (720)
T PF03552_consen 323 PKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEEAIHVAS 402 (720)
T ss_pred chhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhc
Confidence
Q ss_pred -------------CCCCCCccchHHHHHHHHhCCCeEEEeccc--cccccCCcChHHHHHHHHhhhcchHHHHHhhcccc
Q 009761 274 -------------GWKDRTTVEDMDLAVRASLKGWKFVYVGDL--KVKNELPSTFKAYRYQQHRWSCGPANLFKKMVGEI 338 (526)
Q Consensus 274 -------------g~~~~~~~ED~~l~~rl~~~G~~~~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~ 338 (526)
||-.++++||+..++++|.+|||.+|+... ...+..|.++.+.+.|++||+.|.+|++......+
T Consensus 403 C~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl 482 (720)
T PF03552_consen 403 CGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPL 482 (720)
T ss_pred CCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCch
Confidence 344445889999999999999999998653 34689999999999999999999999976433555
Q ss_pred ccc--CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-chhh----HHHHHHHHHHHHHH-HHh-----
Q 009761 339 MRT--KKVTLWKKLYVIYSFFFVRKVVAHIVTFVFYCVLLPATVLFPE-VEVP----KWGAVYIPSIITLL-NAV----- 405 (526)
Q Consensus 339 ~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~----~~~~~~~~~~~~~~-~~~----- 405 (526)
+.. +++++.+++.|+...++. + ..+..+.|+ .+|...++.. ..+| .|..+++++++... ..+
T Consensus 483 ~~g~~~rL~~lQrLaY~~~~~yp---l-~Sipll~Y~-~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~w 557 (720)
T PF03552_consen 483 WYGYGGRLKFLQRLAYLNYMLYP---L-TSIPLLCYC-FLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRW 557 (720)
T ss_pred hccCCCCCcHHHHHHHHHHhhhH---H-HHHHHHHHH-HhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHh
Confidence 544 789999999887544331 1 111122333 4565555422 1111 12222332222111 111
Q ss_pred ---ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcceEEecccCC
Q 009761 406 ---GTPRSLHLLVFWILFENVMSLHRTKATFIGLLEA--GRVNEWVVTEKLGD 453 (526)
Q Consensus 406 ---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~w~~T~K~~~ 453 (526)
..+.+|..-.+|++... -..+.|++.++++. +++..|.+|+|...
T Consensus 558 sG~si~~WWrnQq~W~I~~t---Sa~LfAvl~~iLK~lg~s~t~F~VTsK~~d 607 (720)
T PF03552_consen 558 SGVSIREWWRNQQFWMIGGT---SAHLFAVLQGILKVLGGSETSFTVTSKVSD 607 (720)
T ss_pred ccCcHHHhhcccceeeehhh---HHHHHHHHHHHHHHHcCCccceeecccccc
Confidence 11223334445543221 12344666666665 78999999999765
No 37
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.94 E-value=1.2e-25 Score=208.65 Aligned_cols=197 Identities=20% Similarity=0.306 Sum_probs=146.7
Q ss_pred CcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccH
Q 009761 91 PMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGA 169 (526)
Q Consensus 91 P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~a 169 (526)
|++||+||+|||+ +.+++||+|+.+|+|++.+ +|+|+|+|+|++.+.+.+....+ ..+++++. .+.+.|++.+
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~e-iivvd~gs~d~~~~~~~~~~~~~----~~~~~~~~-~~~~~g~~~a 74 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNWE-LCIADDASTDPEVKRVLKKYAAQ----DPRIKVVF-REENGGISAA 74 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCCeE-EEEEeCCCCChHHHHHHHHHHhc----CCCEEEEE-cccCCCHHHH
Confidence 6799999999999 9999999999999998644 34466778888777666654433 34566664 4455569999
Q ss_pred HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccc
Q 009761 170 LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGS 249 (526)
Q Consensus 170 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (526)
+|.|++.+ ++||++++|+|+.++|+++++++..++++|++++|.+.......+....... ..........
T Consensus 75 ~n~g~~~a---~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~--- 144 (202)
T cd04184 75 TNSALELA---TGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPF----FKPDWSPDLL--- 144 (202)
T ss_pred HHHHHHhh---cCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEeccc----cCCCCCHHHh---
Confidence 99999999 9999999999999999999999999877899998877654322211111000 0000000000
Q ss_pred cCCCcccccccceeeeHHHHHHcCCCCCCC-ccchHHHHHHHHhCCCeEEEecccccc
Q 009761 250 STYAFFGFNGTAGVWRISALNEAGGWKDRT-TVEDMDLAVRASLKGWKFVYVGDLKVK 306 (526)
Q Consensus 250 ~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~-~~ED~~l~~rl~~~G~~~~~~~~~~~~ 306 (526)
. .....|+++++||++++++|||++.. ..||++++.|+.++|+++.++|++...
T Consensus 145 --~-~~~~~~~~~~~~r~~~~~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~~~~~ 199 (202)
T cd04184 145 --L-SQNYIGHLLVYRRSLVRQVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPRVLYH 199 (202)
T ss_pred --h-hcCCccceEeEEHHHHHHhCCCCcCcccchhHHHHHHHHhccceEEEccHhhhh
Confidence 0 01234778899999999999999853 689999999999999999999987643
No 38
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.93 E-value=1.1e-25 Score=205.60 Aligned_cols=180 Identities=23% Similarity=0.292 Sum_probs=139.7
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCce-EEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHH
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRI-TIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEG 173 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~-~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~g 173 (526)
|+||+|||++.+.++|+++.+|+||.... +|+|+|+|+|+|.+ +++.. +..+. ....++++||+.|+|.|
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~-~~~~~-------~~~~~-~~~~~~~~gk~~aln~g 71 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQ-VARAA-------GATVL-ERHDPERRGKGYALDFG 71 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHH-HHHHc-------CCeEE-EeCCCCCCCHHHHHHHH
Confidence 68999999999999999999999986544 44466779998876 44322 22332 22344566799999999
Q ss_pred hhhhc--ccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccC
Q 009761 174 MKHSY--VKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSST 251 (526)
Q Consensus 174 l~~a~--~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (526)
++.+. ..++|+++++|+|+.++|+++.+++..+.++ .++|++.....+.+.++..+.+...+...+...+......
T Consensus 72 ~~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~~--~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (183)
T cd06438 72 FRHLLNLADDPDAVVVFDADNLVDPNALEELNARFAAG--ARVVQAYYNSKNPDDSWITRLYAFAFLVFNRLRPLGRSNL 149 (183)
T ss_pred HHHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhhC--CCeeEEEEeeeCCccCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99872 2359999999999999999999999999543 4678888877776668888887776665555555444555
Q ss_pred CCcccccccceeeeHHHHHHcCCCCCCCccchHHH
Q 009761 252 YAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDL 286 (526)
Q Consensus 252 ~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l 286 (526)
+....+.|+++++||+++++ |||++.+++||+++
T Consensus 150 ~~~~~~~G~~~~~rr~~l~~-~g~~~~~l~ED~~~ 183 (183)
T cd06438 150 GLSCQLGGTGMCFPWAVLRQ-APWAAHSLTEDLEF 183 (183)
T ss_pred CCCeeecCchhhhHHHHHHh-CCCCCCCcccccCC
Confidence 55566789999999999999 89999999999874
No 39
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.93 E-value=2.9e-25 Score=218.89 Aligned_cols=209 Identities=18% Similarity=0.120 Sum_probs=145.9
Q ss_pred EEEEecCCCh-HHHHHHHHHHHcCCCCCCc-eEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHH
Q 009761 94 LVQIPMYNEK-EVYQLSIGAACGLSWPSDR-ITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALK 171 (526)
Q Consensus 94 sViIp~yne~-~~l~~~L~sl~~q~yp~~~-~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln 171 (526)
||+||+|||+ +.+++||+|+.+|+++... ++|+|+|+|+|++.+.+.+....+ ...+++++.. +++.|.+.|+|
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~---~~~~v~vi~~-~~n~G~~~a~N 76 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKK---YLPKVKVLRL-KKREGLIRARI 76 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhh---cCCcEEEEEc-CCCCCHHHHHH
Confidence 6999999999 9999999999999987642 455577779999988554422222 2457888744 44556999999
Q ss_pred HHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHH-H-----H-HHHHhhhhhhh-h
Q 009761 172 EGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLM-T-----R-MQEMSLDYHFT-V 243 (526)
Q Consensus 172 ~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~-~-----~-~~~~~~~~~~~-~ 243 (526)
.|+++| +||||+++|+|+.++|+||++++..++++|.. ++.+.....+.+.... . . .........+. .
T Consensus 77 ~g~~~A---~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~-~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (299)
T cd02510 77 AGARAA---TGDVLVFLDSHCEVNVGWLEPLLARIAENRKT-VVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPL 152 (299)
T ss_pred HHHHHc---cCCEEEEEeCCcccCccHHHHHHHHHHhCCCe-EEEeeeccccCCCeeEecCCCceeEEecccceeccccC
Confidence 999999 99999999999999999999999999777654 4444322211110000 0 0 00000000000 0
Q ss_pred h-----hhccccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEeccccccccCC
Q 009761 244 E-----QEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDLKVKNELP 310 (526)
Q Consensus 244 ~-----~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p 310 (526)
. ............++|+++++||++++++||||+.. ..||.|+++|+.++|+++.++|++.+.|...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~ 227 (299)
T cd02510 153 PEEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFR 227 (299)
T ss_pred CHHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEecc
Confidence 0 00001112233467999999999999999999965 2599999999999999999999999876443
No 40
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.93 E-value=7.3e-25 Score=201.37 Aligned_cols=179 Identities=23% Similarity=0.297 Sum_probs=142.2
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeC--CCCCCCccHHHH
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRD--SRNGYKAGALKE 172 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~--~~~g~K~~aln~ 172 (526)
|+||+|||++.+.++|+|+.+|+ |+. .+|+|+|+|+|.|.+ +++ ... ...+++++.+. +.++||++|+|.
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~-~~~-eIivvdd~S~D~t~~-~~~-~~~----~~~~v~~i~~~~~~~~~Gk~~aln~ 72 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNK-PNF-LVLVIDDASDDDTAG-IVR-LAI----TDSRVHLLRRHLPNARTGKGDALNA 72 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCC-CCe-EEEEEECCCCcCHHH-HHh-hee----cCCcEEEEeccCCcCCCCHHHHHHH
Confidence 68999999999999999999998 653 344466778898877 444 211 13467777543 345579999999
Q ss_pred Hhhhhcc--------cCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhh
Q 009761 173 GMKHSYV--------KQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVE 244 (526)
Q Consensus 173 gl~~a~~--------~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (526)
|++.+.. .++|+|+++|+|+.++|++++++...+ ++|+++++++.....|.+.++.++++.+++...+...
T Consensus 73 g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 151 (191)
T cd06436 73 AYDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYF-SDPRVAGTQSRVRMYNRHKNLLTILQDLEFFIIIAAT 151 (191)
T ss_pred HHHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhh-cCCceEEEeeeEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 9998721 124899999999999999999988877 6899999999999999888999999999888777666
Q ss_pred hhccccCCCcccccccceeeeHHHHHHcCCCCCC--Cccch
Q 009761 245 QEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDR--TTVED 283 (526)
Q Consensus 245 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~--~~~ED 283 (526)
+..+...+. ..+.|++.++||++++++|||++. +++||
T Consensus 152 ~~~~~~~~~-~~~~G~~~~~r~~~l~~vgg~~~~~~~~~ED 191 (191)
T cd06436 152 QSLRALTGT-VGLGGNGQFMRLSALDGLIGEEPWSDSLLED 191 (191)
T ss_pred HHHHHhcCc-EEECCeeEEEeHHHHHHhhcCCCCchhhcCC
Confidence 666655553 457899999999999999776664 78888
No 41
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.93 E-value=7.3e-25 Score=203.17 Aligned_cols=197 Identities=23% Similarity=0.310 Sum_probs=146.6
Q ss_pred EEEEecCCCh--HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHH
Q 009761 94 LVQIPMYNEK--EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALK 171 (526)
Q Consensus 94 sViIp~yne~--~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln 171 (526)
||+||+||++ +.+++||+|+.+|+|++.+ +|+|+|+|++++..++++...++ .+++++..++ +.|+++|+|
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~e-iiivdd~ss~d~t~~~~~~~~~~-----~~i~~i~~~~-n~G~~~a~N 73 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPPDE-VVLVKDGPVTQSLNEVLEEFKRK-----LPLKVVPLEK-NRGLGKALN 73 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCCcE-EEEEECCCCchhHHHHHHHHHhc-----CCeEEEEcCc-cccHHHHHH
Confidence 6899999997 5999999999999999644 45477777555555577666544 2377764444 456999999
Q ss_pred HHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccC
Q 009761 172 EGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSST 251 (526)
Q Consensus 172 ~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (526)
.|++.+ ++||++++|+|++++|+++++++..++++|+++++++.....+.+........ ............
T Consensus 74 ~g~~~a---~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----- 144 (201)
T cd04195 74 EGLKHC---TYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRR-LPTSHDDILKFA----- 144 (201)
T ss_pred HHHHhc---CCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecccc-CCCCHHHHHHHh-----
Confidence 999999 99999999999999999999999999888999999998776544321111000 000000000000
Q ss_pred CCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEecccccc
Q 009761 252 YAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVK 306 (526)
Q Consensus 252 ~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~ 306 (526)
.....+.+.++++||++++++|||++....||+++..|+..+|+++.++|++.++
T Consensus 145 ~~~~~~~~~~~~~rr~~~~~~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~~~~~ 199 (201)
T cd04195 145 RRRSPFNHPTVMFRKSKVLAVGGYQDLPLVEDYALWARMLANGARFANLPEILVK 199 (201)
T ss_pred ccCCCCCChHHhhhHHHHHHcCCcCCCCCchHHHHHHHHHHcCCceecccHHHhh
Confidence 0011245678899999999999999988999999999999999999999987654
No 42
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.90 E-value=2.4e-22 Score=185.05 Aligned_cols=142 Identities=35% Similarity=0.528 Sum_probs=126.9
Q ss_pred EEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCccccccccee
Q 009761 184 YVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGV 263 (526)
Q Consensus 184 ~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 263 (526)
||+++|+|+.++||+++++++.++ +|+++++|++....+. +++.++.+..++...+...+...+..+....++|++++
T Consensus 1 ~v~~~DaDt~~~~d~l~~~~~~~~-~~~~~~vq~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 78 (193)
T PF13632_consen 1 YVLFLDADTRLPPDFLERLVAALE-DPKVDAVQGPIIFRNR-GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGML 78 (193)
T ss_pred CEEEEcCCCCCChHHHHHHHHHHh-CCCceEEEccEEecCC-CChhheeehhhhhhhhhhhHHHHHhcCCCccccCccee
Confidence 689999999999999999999995 8999999999998643 78889988888765555555555556666668899999
Q ss_pred eeHHHHHHcCCCC-CCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcch
Q 009761 264 WRISALNEAGGWK-DRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCGP 327 (526)
Q Consensus 264 ~Rr~~l~~~gg~~-~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~ 327 (526)
+|+++++++|||+ ....+||.+++.++.++||++.++|++.++++.|+|++++.+||+||.+|.
T Consensus 79 ~r~~~l~~vg~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 79 FRREALREVGGFDDPFSIGEDMDLGFRLRRAGYRIVYVPDAIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred eeHHHHHHhCcccccccccchHHHHHHHHHCCCEEEEecccceeeeCCCCHHHHHHHHHHHHhhh
Confidence 9999999999999 778999999999999999999999999999999999999999999999997
No 43
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.89 E-value=4.8e-22 Score=186.93 Aligned_cols=201 Identities=13% Similarity=0.085 Sum_probs=136.4
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeC---CCCCCCccHHH
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRD---SRNGYKAGALK 171 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~---~~~g~K~~aln 171 (526)
|+||+||+++.+++||+|+.+|+||+..++|+|+|+|+|+|.+ ++++..++++. .+++++... +.+.|.+.|+|
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiVvDd~S~d~t~~-i~~~~~~~~~~--~~~~~~~~~~~~~~~~G~~~a~N 77 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEGTLELSVFNDASTDKSAE-IIEKWRKKLED--SGVIVLVGSHNSPSPKGVGYAKN 77 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCCCEEEEEEeCCCCccHHH-HHHHHHHhCcc--cCeEEEEecccCCCCccHHHHHH
Confidence 6899999999999999999999998533445466778898876 66666555422 345554332 23346899999
Q ss_pred HHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCC-cHHHHHHHHhhhhhhhhhhhcccc
Q 009761 172 EGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADE-CLMTRMQEMSLDYHFTVEQEVGSS 250 (526)
Q Consensus 172 ~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 250 (526)
.|++.+ +|||++++|+|+.++|+++++++..+.+++. +++.+.......+. ....+... .........+. ...
T Consensus 78 ~g~~~a---~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~ 151 (219)
T cd06913 78 QAIAQS---SGRYLCFLDSDDVMMPQRIRLQYEAALQHPN-SIIGCQVRRIPEDSTERYTRWIN-TLTREQLLTQV-YTS 151 (219)
T ss_pred HHHHhc---CCCEEEEECCCccCChhHHHHHHHHHHhCCC-cEEEEEEEecCcccchhhHHHHH-hcCHHHHHHHH-Hhh
Confidence 999999 9999999999999999999999888766654 34544433222211 11111110 00000000000 000
Q ss_pred CCCcccccccceeeeHHHHHHcCCCCCCC--ccchHHHHHHHHhCCCeEEEecccccc
Q 009761 251 TYAFFGFNGTAGVWRISALNEAGGWKDRT--TVEDMDLAVRASLKGWKFVYVGDLKVK 306 (526)
Q Consensus 251 ~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~--~~ED~~l~~rl~~~G~~~~~~~~~~~~ 306 (526)
.+. ......+++||++++++|||++.. ..||++++.|+.++|+++.++|++...
T Consensus 152 ~~~--~~~~~~~~~rr~~~~~~g~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~ 207 (219)
T cd06913 152 HGP--TVIMPTWFCSREWFSHVGPFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRCLLL 207 (219)
T ss_pred cCC--ccccccceeehhHHhhcCCccchhccchhHHHHHHHHHHcCCceEEEcceeee
Confidence 011 112334689999999999999853 569999999999999999999997764
No 44
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.89 E-value=1.1e-22 Score=188.09 Aligned_cols=191 Identities=18% Similarity=0.268 Sum_probs=142.1
Q ss_pred EEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHH
Q 009761 94 LVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEG 173 (526)
Q Consensus 94 sViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~g 173 (526)
||+||+||+++.++++|+|+.+|++++.+ +|+|+|+|+|++.+ .+++...+ .+.+. ..+++|++.++|.|
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~~e-vivvDd~s~d~~~~-~~~~~~~~------~~~~~--~~~~~g~~~a~n~~ 70 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPNIE-YIVIDGGSTDGTVD-IIKKYEDK------ITYWI--SEPDKGIYDAMNKG 70 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCCce-EEEEeCCCCccHHH-HHHHhHhh------cEEEE--ecCCcCHHHHHHHH
Confidence 68999999999999999999999998733 34466668888776 44433211 23333 34556699999999
Q ss_pred hhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCC
Q 009761 174 MKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYA 253 (526)
Q Consensus 174 l~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (526)
++.+ ++||++++|+|+.+.|+++.+++..+.++++.+++.|.....+.+........ ........ ...
T Consensus 71 ~~~a---~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~----~~~~~~~~-----~~~ 138 (202)
T cd06433 71 IALA---TGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRR----PPPFLDKF-----LLY 138 (202)
T ss_pred HHHc---CCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccCCC----CcchhhhH-----Hhh
Confidence 9999 99999999999999999999999777688999999998876544332111100 00000000 011
Q ss_pred cccccccceeeeHHHHHHcCCCCCC-CccchHHHHHHHHhCCCeEEEecccccc
Q 009761 254 FFGFNGTAGVWRISALNEAGGWKDR-TTVEDMDLAVRASLKGWKFVYVGDLKVK 306 (526)
Q Consensus 254 ~~~~~G~~~~~Rr~~l~~~gg~~~~-~~~ED~~l~~rl~~~G~~~~~~~~~~~~ 306 (526)
...+.++++++||++++++|+|++. ...||.+++.|+.++|+++.+.|+..++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~~~~~ 192 (202)
T cd06433 139 GMPICHQATFFRRSLFEKYGGFDESYRIAADYDLLLRLLLAGKIFKYLPEVLAA 192 (202)
T ss_pred cCcccCcceEEEHHHHHHhCCCchhhCchhhHHHHHHHHHcCCceEecchhhhh
Confidence 1124577889999999999999885 4789999999999999999999988765
No 45
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.89 E-value=5.4e-22 Score=189.60 Aligned_cols=210 Identities=21% Similarity=0.167 Sum_probs=145.7
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcC--CCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCC
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGL--SWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGY 165 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q--~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 165 (526)
+..|+|||+||+|||++.++.+++++.++ +++ +.++|+|+|+|+|+|.+ +++++.++++ ..++.++.. +++.|
T Consensus 6 ~~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~-~~eiivvDdgS~D~t~~-i~~~~~~~~~--~~~v~~~~~-~~n~G 80 (243)
T PLN02726 6 EGAMKYSIIVPTYNERLNIALIVYLIFKALQDVK-DFEIIVVDDGSPDGTQD-VVKQLQKVYG--EDRILLRPR-PGKLG 80 (243)
T ss_pred CCCceEEEEEccCCchhhHHHHHHHHHHHhccCC-CeEEEEEeCCCCCCHHH-HHHHHHHhcC--CCcEEEEec-CCCCC
Confidence 44688999999999999999999988753 343 23344466779998877 5665554431 235555533 44445
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCC---CcHHHHHHHHhhhhhhh
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNAD---ECLMTRMQEMSLDYHFT 242 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 242 (526)
++.|+|.|++.+ ++||++++|+|+.++|+++++++..+ .+++.++|.|.....+.. ..+..+.........
T Consensus 81 ~~~a~n~g~~~a---~g~~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~-- 154 (243)
T PLN02726 81 LGTAYIHGLKHA---SGDFVVIMDADLSHHPKYLPSFIKKQ-RETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVL-- 154 (243)
T ss_pred HHHHHHHHHHHc---CCCEEEEEcCCCCCCHHHHHHHHHHH-HhcCCcEEEEccccCCCCcCCccHHHHHHHHHHHHH--
Confidence 999999999999 99999999999999999999999988 456788888875433221 112222221111111
Q ss_pred hhhhccccCCCcccccccceeeeHHHHHHcCCCCC-CCccchHHHHHHHHhCCCeEEEeccccccccCCc
Q 009761 243 VEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKD-RTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPS 311 (526)
Q Consensus 243 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~-~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~ 311 (526)
.....+ .......|++.++||+++++++.+.+ ....+|.|++.++...|+++..+|.....+....
T Consensus 155 ~~~~~~---~~~~d~~g~~~~~rr~~~~~i~~~~~~~~~~~~~el~~~~~~~g~~i~~vp~~~~~r~~g~ 221 (243)
T PLN02726 155 AQTLLW---PGVSDLTGSFRLYKRSALEDLVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGE 221 (243)
T ss_pred HHHHhC---CCCCcCCCcccceeHHHHHHHHhhccCCCcEEehHHHHHHHHcCCcEEEeCcEEeCCCCCc
Confidence 011111 12223568889999999999976544 4577899999999999999999998776544333
No 46
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.89 E-value=8.4e-23 Score=194.49 Aligned_cols=203 Identities=22% Similarity=0.262 Sum_probs=138.1
Q ss_pred EEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHH
Q 009761 95 VQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEG 173 (526)
Q Consensus 95 ViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~g 173 (526)
++||+|||+ +.+++||+|+.+|. . +|+|+||++|++.....+. ...+++++..+++ .|+++|+|.|
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q~---~--~iivvDn~s~~~~~~~~~~-------~~~~i~~i~~~~n-~G~~~a~N~g 67 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQV---D--KVVVVDNSSGNDIELRLRL-------NSEKIELIHLGEN-LGIAKALNIG 67 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhccC---C--EEEEEeCCCCccHHHHhhc-------cCCcEEEEECCCc-eehHHhhhHH
Confidence 589999999 99999999999982 2 3445566555554433322 1356777755444 4599999999
Q ss_pred hhhhcccCCcEEEEecCCCCCChHHHHHHH---hhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhcccc
Q 009761 174 MKHSYVKQCDYVAIFDADFEPEPDFLWRTI---PFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSS 250 (526)
Q Consensus 174 l~~a~~~~~d~v~~lDaD~~~~pd~L~~lv---~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (526)
++.+.+.++||++++|+|+.++|++|.+++ ..++++++++++++.....+..... .......... .........
T Consensus 68 ~~~a~~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~ 144 (237)
T cd02526 68 IKAALENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENS-PGVRKSGYKL--RIQKEGEEG 144 (237)
T ss_pred HHHHHhCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeec-cceeccCccc--eecccccCC
Confidence 999932234999999999999999999994 5555678888776655432221111 1100000000 000000111
Q ss_pred CCCcccccccceeeeHHHHHHcCCCCCCC--ccchHHHHHHHHhCCCeEEEeccccccccCCcCh
Q 009761 251 TYAFFGFNGTAGVWRISALNEAGGWKDRT--TVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTF 313 (526)
Q Consensus 251 ~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~--~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~ 313 (526)
........|+++++||++++++|||++.. ..||.+++.|+.++|+++.++|++.++++.+.+-
T Consensus 145 ~~~~~~~~~~~~~~rr~~~~~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~~~ 209 (237)
T cd02526 145 LKEVDFLITSGSLISLEALEKVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPDAVLKHELGDKR 209 (237)
T ss_pred ceEeeeeeccceEEcHHHHHHhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcCeEEEecccCcc
Confidence 11122244778999999999999999865 3689999999999999999999999988876653
No 47
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.89 E-value=1.6e-22 Score=189.21 Aligned_cols=197 Identities=19% Similarity=0.131 Sum_probs=143.7
Q ss_pred EEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHH
Q 009761 94 LVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEG 173 (526)
Q Consensus 94 sViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~g 173 (526)
||+||+||+++.++++|+|+++|+||+. ++|+|+|+|+|+|.+ ++++..+++ +..+.+. ..+.+.|+++++|.|
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~-eiiVvddgS~d~t~~-~~~~~~~~~---~~~~~~~-~~~~~~G~~~~~n~g 74 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKND-ELIISDDGSTDGTVE-IIKEYIDKD---PFIIILI-RNGKNLGVARNFESL 74 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCCe-EEEEEeCCCCCCcHH-HHHHHHhcC---CceEEEE-eCCCCccHHHHHHHH
Confidence 6899999999999999999999999953 344466778888876 666655442 1234444 555566699999999
Q ss_pred hhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhh--hhhhhhccccC
Q 009761 174 MKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYH--FTVEQEVGSST 251 (526)
Q Consensus 174 l~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 251 (526)
++.+ ++|||+++|+|+.++|+++.+++..+.++++.+++++.....+.+............... ..... .
T Consensus 75 ~~~~---~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 146 (214)
T cd04196 75 LQAA---DGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEYQKIKPGTSFNN-----L 146 (214)
T ss_pred HHhC---CCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccccccccccCCccCHHH-----H
Confidence 9999 999999999999999999999999866888999999887655443221111100000000 00000 0
Q ss_pred CCcccccccceeeeHHHHHHcCCCCCC-CccchHHHHHHHHhCCCeEEEeccccc
Q 009761 252 YAFFGFNGTAGVWRISALNEAGGWKDR-TTVEDMDLAVRASLKGWKFVYVGDLKV 305 (526)
Q Consensus 252 ~~~~~~~G~~~~~Rr~~l~~~gg~~~~-~~~ED~~l~~rl~~~G~~~~~~~~~~~ 305 (526)
.......|+++++||++++++|++++. ...||.++..++.. |.++.++|+..+
T Consensus 147 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~ 200 (214)
T cd04196 147 LFQNVVTGCTMAFNRELLELALPFPDADVIMHDWWLALLASA-FGKVVFLDEPLI 200 (214)
T ss_pred HHhCccCCceeeEEHHHHHhhccccccccccchHHHHHHHHH-cCceEEcchhHH
Confidence 011124688999999999999999887 78899999998887 668999988765
No 48
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.89 E-value=3.1e-22 Score=185.71 Aligned_cols=177 Identities=20% Similarity=0.196 Sum_probs=141.4
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHh
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl 174 (526)
|+||+||+++.++++|+|+.+|++|..+ +|+|+|+|+|+|.+ .+++..+. .+++++..+++ .|.+.++|.|+
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~~e-iiivD~~s~d~t~~-~~~~~~~~-----~~i~~~~~~~n-~g~~~~~n~~~ 72 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPPDH-IIVIDNASTDGTAE-WLTSLGDL-----DNIVYLRLPEN-LGGAGGFYEGV 72 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCCce-EEEEECCCCcchHH-HHHHhcCC-----CceEEEECccc-cchhhHHHHHH
Confidence 6899999999999999999999999654 44477778898876 55444222 23666655544 45889999999
Q ss_pred hhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCc
Q 009761 175 KHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAF 254 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (526)
+.+...++|+++++|+|++++|+++++++..++ +++++++.+.....+.
T Consensus 73 ~~a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~~-~~~~~~~~~~~~~~~~------------------------------ 121 (202)
T cd04185 73 RRAYELGYDWIWLMDDDAIPDPDALEKLLAYAD-KDNPQFLAPLVLDPDG------------------------------ 121 (202)
T ss_pred HHHhccCCCEEEEeCCCCCcChHHHHHHHHHHh-cCCceEecceeEcCCC------------------------------
Confidence 876434799999999999999999999999984 8888888776432221
Q ss_pred ccccccceeeeHHHHHHcCCCCCC--CccchHHHHHHHHhCCCeEEEeccccccccCCcChH
Q 009761 255 FGFNGTAGVWRISALNEAGGWKDR--TTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFK 314 (526)
Q Consensus 255 ~~~~G~~~~~Rr~~l~~~gg~~~~--~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~ 314 (526)
+++++++||++++++|++++. ...||.+++.++.+.|+++ ++|++.+++..+.+..
T Consensus 122 ---~~~~~~~~~~~~~~~g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~~~ 179 (202)
T cd04185 122 ---SFVGVLISRRVVEKIGLPDKEFFIWGDDTEYTLRASKAGPGI-YVPDAVVVHKTAINKG 179 (202)
T ss_pred ---ceEEEEEeHHHHHHhCCCChhhhccchHHHHHHHHHHcCCcE-EecceEEEEccccccc
Confidence 245689999999999998874 3679999999999999999 9999999888776543
No 49
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.89 E-value=4.1e-22 Score=178.34 Aligned_cols=163 Identities=23% Similarity=0.357 Sum_probs=136.9
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHh
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl 174 (526)
|+||+||+++.++++++|+.+|+++..+ +++++|+|+|++.+.+ ++. ..+++++..+ .+.|+++|+|.|+
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~~~-iiivdd~s~~~~~~~~-~~~-------~~~~~~~~~~-~~~g~~~a~n~~~ 70 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPDFE-VIVVDNASTDGSVELL-REL-------FPEVRLIRNG-ENLGFGAGNNQGI 70 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCCeE-EEEEECCCCchHHHHH-HHh-------CCCeEEEecC-CCcChHHHhhHHH
Confidence 6899999999999999999999986544 3446777888876633 322 1256666444 4455999999999
Q ss_pred hhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCc
Q 009761 175 KHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAF 254 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (526)
+.+ ++|+++++|+|+.++|+++.+++..+.++++++++++.
T Consensus 71 ~~~---~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------------ 111 (166)
T cd04186 71 REA---KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK------------------------------------ 111 (166)
T ss_pred hhC---CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc------------------------------------
Confidence 999 99999999999999999999999988788899888776
Q ss_pred ccccccceeeeHHHHHHcCCCCCCC--ccchHHHHHHHHhCCCeEEEecccccccc
Q 009761 255 FGFNGTAGVWRISALNEAGGWKDRT--TVEDMDLAVRASLKGWKFVYVGDLKVKNE 308 (526)
Q Consensus 255 ~~~~G~~~~~Rr~~l~~~gg~~~~~--~~ED~~l~~rl~~~G~~~~~~~~~~~~~~ 308 (526)
..|+++++||++++++|||++.. ..||.+++.++.++|+++.+.|+..++|.
T Consensus 112 --~~~~~~~~~~~~~~~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~~~~h~ 165 (166)
T cd04186 112 --VSGAFLLVRREVFEEVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQAVIYHH 165 (166)
T ss_pred --CceeeEeeeHHHHHHcCCCChhhhccccHHHHHHHHHHcCCeEEEccceEEEec
Confidence 45889999999999999999854 67999999999999999999999988764
No 50
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.89 E-value=1.3e-21 Score=184.63 Aligned_cols=202 Identities=19% Similarity=0.161 Sum_probs=141.3
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHh
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl 174 (526)
|+||+|||++.++++|+|+.+|.++....+|+|+|+|+|++.+ +++.+.++ ..+++++. .+.++|+++|+|.|+
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~-~~~~~~~~----~~~i~~~~-~~~n~G~~~a~n~g~ 74 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALKGIDYEIIVVDDNSPDGTAE-IVRELAKE----YPRVRLIV-RPGKRGLGSAYIEGF 74 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhcCCCeEEEEEeCCCCCChHH-HHHHHHHh----CCceEEEe-cCCCCChHHHHHHHH
Confidence 6899999999999999999999983233345466778898876 55555443 34566664 445556999999999
Q ss_pred hhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCC-Cc--HHHHHHHHhhhhhhhhhhhccccC
Q 009761 175 KHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNAD-EC--LMTRMQEMSLDYHFTVEQEVGSST 251 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~ 251 (526)
+.+ ++|+++++|+|+.++|+++.+++..+ .+++.++|.|........ .+ ...+....... ...+.. ..
T Consensus 75 ~~a---~gd~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~ 145 (224)
T cd06442 75 KAA---RGDVIVVMDADLSHPPEYIPELLEAQ-LEGGADLVIGSRYVEGGGVEGWGLKRKLISRGAN---LLARLL--LG 145 (224)
T ss_pred HHc---CCCEEEEEECCCCCCHHHHHHHHHHH-hcCCCCEEEEeeeecCCccCCCcHHHHHHHHHHH---HHHHHH--cC
Confidence 999 99999999999999999999999986 455667777765433221 11 11111100000 011110 01
Q ss_pred CCcccccccceeeeHHHHHHcC-CCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCc
Q 009761 252 YAFFGFNGTAGVWRISALNEAG-GWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPS 311 (526)
Q Consensus 252 ~~~~~~~G~~~~~Rr~~l~~~g-g~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~ 311 (526)
.......|+++++||++++++| +++.....+|.|++.++.+.|+++.+.|.....+..-.
T Consensus 146 ~~~~~~~~~~~~~~r~~~~~ig~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g~ 206 (224)
T cd06442 146 RKVSDPTSGFRAYRREVLEKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGE 206 (224)
T ss_pred CCCCCCCCccchhhHHHHHHHhhhccCCCcEEeHHHHHHHHHcCCeEEEeCeEEeccCCCc
Confidence 1222355788899999999998 55555677899999999999999999998766544433
No 51
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.88 E-value=1.5e-21 Score=183.80 Aligned_cols=184 Identities=20% Similarity=0.201 Sum_probs=130.8
Q ss_pred EEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHH
Q 009761 93 VLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKE 172 (526)
Q Consensus 93 VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~ 172 (526)
|||+||+||+++.++++|+|+.+|+|++.+ +|+|+|+|+|++.+ .+++ .++.+. ..+. |++.++|.
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~e-vivvdd~s~d~~~~-~~~~---------~~~~~~--~~~~-g~~~a~n~ 66 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLPLE-IIVVDGGSTDGTVA-IARS---------AGVVVI--SSPK-GRARQMNA 66 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCCcE-EEEEeCCCCccHHH-HHhc---------CCeEEE--eCCc-CHHHHHHH
Confidence 689999999999999999999999986544 34466678888866 3332 345554 3333 48999999
Q ss_pred HhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCC
Q 009761 173 GMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTY 252 (526)
Q Consensus 173 gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (526)
|++.+ ++|+++++|+|+.++|+++++++..+ .+++..++.......+.+ ...+.... .. . .... .
T Consensus 67 g~~~a---~~~~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~--~----~~~~-~ 131 (221)
T cd02522 67 GAAAA---RGDWLLFLHADTRLPPDWDAAIIETL-RADGAVAGAFRLRFDDPG--PRLRLLEL--GA--N----LRSR-L 131 (221)
T ss_pred HHHhc---cCCEEEEEcCCCCCChhHHHHHHHHh-hcCCcEEEEEEeeecCCc--cchhhhhh--cc--c----ceec-c
Confidence 99999 89999999999999999999998776 444544444443333322 11111110 00 0 0000 0
Q ss_pred CcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEecccccc
Q 009761 253 AFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVK 306 (526)
Q Consensus 253 ~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~ 306 (526)
......+.++++||++++++|||++....||++++.|+.++|+++.+ |...+.
T Consensus 132 ~~~~~~~~~~~~r~~~~~~~G~fd~~~~~ED~d~~~r~~~~G~~~~~-~~~~~~ 184 (221)
T cd02522 132 FGLPYGDQGLFIRRELFEELGGFPELPLMEDVELVRRLRRRGRPALL-PSPVTT 184 (221)
T ss_pred cCCCcCCceEEEEHHHHHHhCCCCccccccHHHHHHHHHhCCCEEEc-Cceeee
Confidence 11113466899999999999999998899999999999999999877 655543
No 52
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.88 E-value=1.1e-21 Score=178.66 Aligned_cols=176 Identities=24% Similarity=0.272 Sum_probs=131.0
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHh
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl 174 (526)
|+||+||+++.++++|+|+.+|++++.++ |+|+|+|+|.+.+ +++...+.. +.++..+.+.+.+.++++++|.|+
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~~ei-ivvdd~s~d~t~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~n~g~ 75 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILPFEV-IIADDGSTEETKE-LIEEFKSQF---PIPIKHVWQEDEGFRKAKIRNKAI 75 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCCCEE-EEEeCCCchhHHH-HHHHHHhhc---CCceEEEEcCCcchhHHHHHHHHH
Confidence 68999999999999999999999886543 4466778888766 555443321 233444434444446899999999
Q ss_pred hhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCc
Q 009761 175 KHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAF 254 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (526)
+.+ ++||++++|+|+.++|++++++++.+ ++++.+++++.. .+.+...
T Consensus 76 ~~a---~g~~i~~lD~D~~~~~~~l~~~~~~~--~~~~~v~g~~~~-~~~~~~~-------------------------- 123 (182)
T cd06420 76 AAA---KGDYLIFIDGDCIPHPDFIADHIELA--EPGVFLSGSRVL-LNEKLTE-------------------------- 123 (182)
T ss_pred HHh---cCCEEEEEcCCcccCHHHHHHHHHHh--CCCcEEecceee-cccccce--------------------------
Confidence 999 99999999999999999999999987 566655554443 3221110
Q ss_pred ccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEe-ccccccc
Q 009761 255 FGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYV-GDLKVKN 307 (526)
Q Consensus 255 ~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~-~~~~~~~ 307 (526)
....|++++++|+.+.+.|||++.. ..||++++.|+.++|++...+ +++.++|
T Consensus 124 ~~~~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h 180 (182)
T cd06420 124 RGIRGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFH 180 (182)
T ss_pred eEeccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeee
Confidence 1245788889999999999999864 379999999999999655554 4666654
No 53
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.88 E-value=6.3e-22 Score=196.33 Aligned_cols=201 Identities=17% Similarity=0.217 Sum_probs=139.8
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccH
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGA 169 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~a 169 (526)
.|.|||+||+||+++.+++||+|+++|+|++.+ +|+|+|+|+|+|.+ ++++..++ ..++++++ ++++|.+.|
T Consensus 5 ~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~E-IIiVdDgStD~t~~-i~~~~~~~----~~~i~vi~--~~n~G~~~a 76 (328)
T PRK10073 5 TPKLSIIIPLYNAGKDFRAFMESLIAQTWTALE-IIIVNDGSTDNSVE-IAKHYAEN----YPHVRLLH--QANAGVSVA 76 (328)
T ss_pred CCeEEEEEeccCCHHHHHHHHHHHHhCCCCCeE-EEEEeCCCCccHHH-HHHHHHhh----CCCEEEEE--CCCCChHHH
Confidence 588999999999999999999999999998644 44477889998877 66665554 45787774 346679999
Q ss_pred HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEE--EecCCCc--HH--HHHHHHh-hhhhhh
Q 009761 170 LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWK--FVNADEC--LM--TRMQEMS-LDYHFT 242 (526)
Q Consensus 170 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~--~~~~~~~--~~--~~~~~~~-~~~~~~ 242 (526)
+|.|++.| +||||+++|+|+.++|+++++++..++ +++.+++.+... ..+.... .. .+..... +.....
T Consensus 77 rN~gl~~a---~g~yi~flD~DD~~~p~~l~~l~~~~~-~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (328)
T PRK10073 77 RNTGLAVA---TGKYVAFPDADDVVYPTMYETLMTMAL-EDDLDVAQCNADWCFRDTGETWQSIPSDRLRSTGVLSGPDW 152 (328)
T ss_pred HHHHHHhC---CCCEEEEECCCCccChhHHHHHHHHHH-hCCCCEEEEccEEEEeCCCccccccccccccccceechHHH
Confidence 99999999 999999999999999999999998874 444455544432 2221110 00 0000000 000000
Q ss_pred hhhhccccCCCcccccccceeeeHHHHHHcC-CCCCCCccchHHHHHHHHhCCCeEEEeccccc
Q 009761 243 VEQEVGSSTYAFFGFNGTAGVWRISALNEAG-GWKDRTTVEDMDLAVRASLKGWKFVYVGDLKV 305 (526)
Q Consensus 243 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~g-g~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~ 305 (526)
........ .......+.++||+.+++.| .|+++...||.++..++..++.++.++++...
T Consensus 153 l~~~l~~~---~~~~~~~~~l~Rr~~l~~~~~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~ly 213 (328)
T PRK10073 153 LRMALSSR---RWTHVVWLGVYRRDFIVKNNIKFEPGLHHQDIPWTTEVMFNALRVRYTEQSLY 213 (328)
T ss_pred HHHHHhhC---CCCccHhHHHHHHHHHHHcCCccCCCCEeccHHHHHHHHHHCCEEEEECCCEE
Confidence 00000000 01111335699999999987 46666677999999999999999999998765
No 54
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.88 E-value=4.9e-22 Score=179.03 Aligned_cols=180 Identities=34% Similarity=0.510 Sum_probs=131.3
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHh
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl 174 (526)
|+||+||+++.+.++|+|+.+|.++..++ ++|+|+|+|++.+ ..++..... ...+.++ ...++.|++.++|.|+
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~~~i-ivvdd~s~d~t~~-~~~~~~~~~---~~~~~~~-~~~~~~g~~~~~n~~~ 74 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPKLEV-IVVDDGSTDDTLE-ILEELAALY---IRRVLVV-RDKENGGKAGALNAGL 74 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCceEE-EEEeCCCccchHH-HHHHHhccc---cceEEEE-EecccCCchHHHHHHH
Confidence 68999999999999999999999976443 4366778888776 444332221 1234444 4445566999999999
Q ss_pred hhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCc
Q 009761 175 KHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAF 254 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (526)
+.+ ++|+++++|+|+.++|+++++++..++++++++++++.....+...++........+.................
T Consensus 75 ~~~---~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (180)
T cd06423 75 RHA---KGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSALGGV 151 (180)
T ss_pred Hhc---CCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeeehhheecce
Confidence 999 99999999999999999999997777688999999999877665433433333222222111111111123334
Q ss_pred ccccccceeeeHHHHHHcCCCCCCCccch
Q 009761 255 FGFNGTAGVWRISALNEAGGWKDRTTVED 283 (526)
Q Consensus 255 ~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED 283 (526)
...+|+++++||++++++|||++..+.||
T Consensus 152 ~~~~g~~~~~~~~~~~~~ggf~~~~~~eD 180 (180)
T cd06423 152 LVLSGAFGAFRREALREVGGWDEDTLTED 180 (180)
T ss_pred eecCchHHHHHHHHHHHhCCccccCcCCC
Confidence 55789999999999999999999999998
No 55
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.87 E-value=5.2e-21 Score=184.57 Aligned_cols=225 Identities=13% Similarity=0.081 Sum_probs=144.5
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCcc
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAG 168 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~ 168 (526)
+.|.|||+||+||+++.+.++|+|+++|+||+.+ +|+|+|+|+|. + ..++..+++ ...+++++. .+.++|.+.
T Consensus 3 ~~p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~E-iIVVDDgS~~~--~-~~~~~~~~~--~~~ri~~i~-~~~n~G~~~ 75 (279)
T PRK10018 3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWE-MIIVDDCSTSW--E-QLQQYVTAL--NDPRITYIH-NDINSGACA 75 (279)
T ss_pred CCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCCeE-EEEEECCCCCH--H-HHHHHHHHc--CCCCEEEEE-CCCCCCHHH
Confidence 3588999999999999999999999999999743 33366667642 2 334443332 235787774 445566999
Q ss_pred HHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHh--hhhhhhhhhh
Q 009761 169 ALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMS--LDYHFTVEQE 246 (526)
Q Consensus 169 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 246 (526)
|+|.|++.| +||||+++|+|+.++|+.|++++..+++.++.+++.+....... ... ....... ....+.....
T Consensus 76 a~N~gi~~a---~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~p~~~~~~~~~ 150 (279)
T PRK10018 76 VRNQAIMLA---QGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQG-EVY-SQPASLPLYPKSPYSRRLF 150 (279)
T ss_pred HHHHHHHHc---CCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceeecC-ccc-ccccccCCCCCCCCCHHHH
Confidence 999999999 99999999999999999999999988655666666654322211 100 0000000 0000000000
Q ss_pred ccccCCCcccccccceeeeHHHHHHcCCCCCC-CccchHHHHHHHHhCCCeEEEeccccc-cccCCcChHHHHHHHHhhh
Q 009761 247 VGSSTYAFFGFNGTAGVWRISALNEAGGWKDR-TTVEDMDLAVRASLKGWKFVYVGDLKV-KNELPSTFKAYRYQQHRWS 324 (526)
Q Consensus 247 ~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~-~~~ED~~l~~rl~~~G~~~~~~~~~~~-~~~~p~t~~~~~~Qr~RW~ 324 (526)
. ..+..|+..+.++..+.+ ++|+++ ...||+|+..|+..+|++...+|++.. ++..+.+.+...+..+ .
T Consensus 151 ~------~~n~ig~~~~~~~~~~~~-~~fd~~~~~~eDydlwlrl~~~~~~~~~~~~~l~~y~~~~~s~~~~~s~~k--~ 221 (279)
T PRK10018 151 Y------KRNIIGNQVFTWAWRFKE-CLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKK--F 221 (279)
T ss_pred H------HhcCcCceeeehhhhhhh-cccCCCCCccccHHHHHHHHHhcCceEeeccceEEEEcCCCCccccCCHHH--H
Confidence 0 011336666666666654 578765 468999999999999999999999854 3334444421111111 3
Q ss_pred cchHHHHHhh
Q 009761 325 CGPANLFKKM 334 (526)
Q Consensus 325 ~G~~~~~~~~ 334 (526)
++..++.++|
T Consensus 222 ~~~~~~~rk~ 231 (279)
T PRK10018 222 SGYFHFYRKH 231 (279)
T ss_pred HHHHHHHHHh
Confidence 4444677766
No 56
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.86 E-value=4.1e-19 Score=176.31 Aligned_cols=240 Identities=15% Similarity=0.066 Sum_probs=151.3
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcC-------CCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeC
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGL-------SWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRD 160 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q-------~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~ 160 (526)
+..|.+||+||+|||++.++++++++.++ +++...++|+|+|+|+|+|.+ ++++..+++...+.+++++..+
T Consensus 67 ~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~-i~~~~~~~~~~~~~~i~vi~~~ 145 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLK-VAKDFWRQNINPNIDIRLLSLL 145 (333)
T ss_pred CCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHH-HHHHHHHhcCCCCCcEEEEEcC
Confidence 45678999999999999999999988753 233233455567779999987 5565555431123457777444
Q ss_pred CCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhc--CCCEEEEeeEEEEecCC-----CcHHHHHH
Q 009761 161 SRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH--NPDIALVQARWKFVNAD-----ECLMTRMQ 233 (526)
Q Consensus 161 ~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~--~~~v~~V~~~~~~~~~~-----~~~~~~~~ 233 (526)
++.||++|+|.|++.+ +||+|+++|+|...+|+.+.+++..+++ ++++++|.|.......+ .++..+..
T Consensus 146 -~N~G~~~A~~~Gi~~a---~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~~~~~~~~~r~~~ 221 (333)
T PTZ00260 146 -RNKGKGGAVRIGMLAS---RGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSDVVAKRKWYRNIL 221 (333)
T ss_pred -CCCChHHHHHHHHHHc---cCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCcccccCcHHHHHH
Confidence 4455999999999999 9999999999999999999999988753 57788888876543221 23333332
Q ss_pred HHhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCC-CCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcC
Q 009761 234 EMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGG-WKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPST 312 (526)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg-~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t 312 (526)
...+. .......+..... ...+.-++||++++.+-. ...+...-|.|+..++.+.|+++..+|-.. .+...|
T Consensus 222 ~~~~~--~l~~~~~~~~i~D---~~~Gfk~~~r~~~~~i~~~~~~~~~~fd~Ell~~a~~~g~~I~EvPv~~--~~~~~S 294 (333)
T PTZ00260 222 MYGFH--FIVNTICGTNLKD---TQCGFKLFTRETARIIFPSLHLERWAFDIEIVMIAQKLNLPIAEVPVNW--TEVEGS 294 (333)
T ss_pred HHHHH--HHHHHHcCCCccc---CCCCeEEEeHHHHHHHhhhccccCccchHHHHHHHHHcCCCEEEEceee--EECCCC
Confidence 21111 1111111111111 123357999999987611 111224568999999999999999998543 232223
Q ss_pred hHHHHHHHHhhhcchHHHHHhhccccc
Q 009761 313 FKAYRYQQHRWSCGPANLFKKMVGEIM 339 (526)
Q Consensus 313 ~~~~~~Qr~RW~~G~~~~~~~~~~~~~ 339 (526)
--...+.-.+..+..+++...|+...|
T Consensus 295 k~~~~~~~~~~~~~l~~~~~~y~~~~~ 321 (333)
T PTZ00260 295 KLNVISASIQMARDILLVRSFYLLGIW 321 (333)
T ss_pred eechHHHHHHHHHHHHHHHHHHhcCee
Confidence 222233333444444444444444444
No 57
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.85 E-value=1e-20 Score=169.69 Aligned_cols=155 Identities=25% Similarity=0.369 Sum_probs=129.5
Q ss_pred CCCCCccHHHHHhhh-hcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhh
Q 009761 162 RNGYKAGALKEGMKH-SYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYH 240 (526)
Q Consensus 162 ~~g~K~~aln~gl~~-a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (526)
..++|.+|+..++++ + ++|++++.|+|..++||+|.+++..+ ++|++++|++.+...+. .++..++.......+
T Consensus 14 g~N~Kv~nL~~~~~~~a---~~d~~~~~DsDi~v~p~~L~~lv~~l-~~p~vglVt~~~~~~~~-~~~~~~l~~~~~~~~ 88 (175)
T PF13506_consen 14 GCNPKVNNLAQGLEAGA---KYDYLVISDSDIRVPPDYLRELVAPL-ADPGVGLVTGLPRGVPA-RGFWSRLEAAFFNFL 88 (175)
T ss_pred CCChHHHHHHHHHHhhC---CCCEEEEECCCeeECHHHHHHHHHHH-hCCCCcEEEecccccCC-cCHHHHHHHHHHhHH
Confidence 344699999999998 8 99999999999999999999999999 68999999998876665 467777655444333
Q ss_pred hhhhhhccccCCCcccccccceeeeHHHHHHcCCCCC--CCccchHHHHHHHHhCCCeEEEeccccccccCC----cChH
Q 009761 241 FTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKD--RTTVEDMDLAVRASLKGWKFVYVGDLKVKNELP----STFK 314 (526)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~--~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p----~t~~ 314 (526)
....+. ..+..+..|.++++||++++++|||+. +.++||+.++.+++++|+++...|.+.+.+..| .+++
T Consensus 89 ~~~~~a----~~~~~~~~G~~m~~rr~~L~~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~~v~~~~~~~~~~~s~~ 164 (175)
T PF13506_consen 89 PGVLQA----LGGAPFAWGGSMAFRREALEEIGGFEALADYLADDYALGRRLRARGYRVVLSPYPVVQTSVPRTLEDSFR 164 (175)
T ss_pred HHHHHH----hcCCCceecceeeeEHHHHHHcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcchheeecccCccccccHH
Confidence 233222 234455789999999999999999988 679999999999999999999999988877776 4899
Q ss_pred HHHHHHHhhhc
Q 009761 315 AYRYQQHRWSC 325 (526)
Q Consensus 315 ~~~~Qr~RW~~ 325 (526)
++++++.||++
T Consensus 165 ~~~~r~~RW~r 175 (175)
T PF13506_consen 165 DFFRRQLRWAR 175 (175)
T ss_pred HHHHHHHhhcC
Confidence 99999999985
No 58
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.85 E-value=2.7e-20 Score=183.66 Aligned_cols=213 Identities=25% Similarity=0.317 Sum_probs=154.0
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccH
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGA 169 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~a 169 (526)
.|+++++|++||..+.+.+||+++.+|+|+.+.++ +|+++|+|++.+.+.+.. ..+++++... .|.|-+++
T Consensus 2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv-~vDn~s~d~~~~~~~~~~-------~~~v~~i~~~-~NlG~agg 72 (305)
T COG1216 2 MPKISIIIVTYNRGEDLVECLASLAAQTYPDDVIV-VVDNGSTDGSLEALKARF-------FPNVRLIENG-ENLGFAGG 72 (305)
T ss_pred CcceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEE-EccCCCCCCCHHHHHhhc-------CCcEEEEEcC-CCccchhh
Confidence 37899999999999999999999999999975533 356678999887443321 3678888444 45557999
Q ss_pred HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHH-H-hhhhhh----hh
Q 009761 170 LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQE-M-SLDYHF----TV 243 (526)
Q Consensus 170 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~-~-~~~~~~----~~ 243 (526)
.|.|++.|.....+|++++|.|++++||+|+++++.+++++..++++......+... ....... . ...... ..
T Consensus 73 ~n~g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 151 (305)
T COG1216 73 FNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESL-YIDRRGGESDGLTGGWRASPLL 151 (305)
T ss_pred hhHHHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCc-chheeccccccccccceecccc
Confidence 999999984322339999999999999999999999988889888887766443211 1111100 0 000000 00
Q ss_pred hhhc-cccCCCcc-cccccceeeeHHHHHHcCCCCCCC--ccchHHHHHHHHhCCCeEEEeccccccccCCcC
Q 009761 244 EQEV-GSSTYAFF-GFNGTAGVWRISALNEAGGWKDRT--TVEDMDLAVRASLKGWKFVYVGDLKVKNELPST 312 (526)
Q Consensus 244 ~~~~-~~~~~~~~-~~~G~~~~~Rr~~l~~~gg~~~~~--~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t 312 (526)
.... ........ .++|+++++|+++++++|+||++. ..||.|++.|+.+.|+++.++|++.++|..-.+
T Consensus 152 ~~~~~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s 224 (305)
T COG1216 152 EIAPDLSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIYYEDVDLCLRARKAGYKIYYVPDAIIYHKIGSS 224 (305)
T ss_pred cccccccchhhhhhhcceeeeEEcHHHHHHhCCCCcccceeehHHHHHHHHHHcCCeEEEeeccEEEEeccCC
Confidence 0000 00001111 268999999999999999999954 789999999999999999999999998866554
No 59
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.84 E-value=8.2e-20 Score=174.12 Aligned_cols=190 Identities=15% Similarity=0.066 Sum_probs=127.1
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcC---CCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGL---SWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q---~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
|.|||+||+||+++.++++|+|+.+| .+++ .++|+|+|+|+|+|.+ ++++...+ .+++++. .+ +.|++
T Consensus 1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~-~EiIVvDdgStD~t~~-i~~~~~~~-----~~i~~i~-~~-~~G~~ 71 (248)
T PRK10063 1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGIS-FEWIVVDGGSNDGTRE-FLENLNGI-----FNLRFVS-EP-DNGIY 71 (248)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCC-EEEEEEECcCcccHHH-HHHHhccc-----CCEEEEE-CC-CCCHH
Confidence 67999999999999999999999753 3443 2344466679999877 55543211 3466763 33 44699
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhc
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEV 247 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (526)
+|+|.|++.| +||||+++|+|+.+.|+.++.+.... ..+..+++.|.......+.....+... . ....
T Consensus 72 ~A~N~Gi~~a---~g~~v~~ld~DD~~~~~~~~~~~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~---~-----~~~~ 139 (248)
T PRK10063 72 DAMNKGIAMA---QGRFALFLNSGDIFHQDAANFVRQLK-MQKDNAMIIGDALLDFGDGHKIKRSAK---P-----GWYI 139 (248)
T ss_pred HHHHHHHHHc---CCCEEEEEeCCcccCcCHHHHHHHHH-hCCCCeEEEeeeEEEcCCCcEEEEccC---C-----hhHH
Confidence 9999999999 99999999999999998765443333 343334444444322211111000000 0 0000
Q ss_pred cccCCCcccccccceeeeHHHHHHcCCCCCC-CccchHHHHHHHHhCCCeEEEecccccc
Q 009761 248 GSSTYAFFGFNGTAGVWRISALNEAGGWKDR-TTVEDMDLAVRASLKGWKFVYVGDLKVK 306 (526)
Q Consensus 248 ~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~-~~~ED~~l~~rl~~~G~~~~~~~~~~~~ 306 (526)
. .....++.+.+++++.++. |+|++. ...||+++..|+..+|+++.++|...+.
T Consensus 140 ~----~~~~~~~~~~~~~~~~~~~-~~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l~~ 194 (248)
T PRK10063 140 Y----HSLPASHQAIFFPVSGLKK-WRYDLQYKVSSDYALAARLYKAGYAFKKLNGLVSE 194 (248)
T ss_pred h----cCCCCCCcEEEEEHHHHhc-CCCCcccchHHhHHHHHHHHHcCCcEEEcCceeEE
Confidence 0 0111346678899998875 678875 4679999999999999999999988874
No 60
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.84 E-value=1.5e-19 Score=168.91 Aligned_cols=200 Identities=19% Similarity=0.133 Sum_probs=135.8
Q ss_pred EEEecCCChHHHHHHHHHHHcCCC----CCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHH
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSW----PSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGAL 170 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~y----p~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~al 170 (526)
|+||+|||++.+.++|+++.+|.+ ++ .++|+|+|+|+|+|.+ ++++..+++ +..++++..+.+ .|+++|+
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~-~eiivvdd~S~D~t~~-~~~~~~~~~---~~~i~~i~~~~n-~G~~~a~ 74 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFS-YEIIVVDDGSKDGTAE-VARKLARKN---PALIRVLTLPKN-RGKGGAV 74 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCC-EEEEEEeCCCCCchHH-HHHHHHHhC---CCcEEEEEcccC-CCcHHHH
Confidence 689999999999999999998865 33 2344466779998876 566555543 222466644444 4599999
Q ss_pred HHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCC----CcHHHHHHHHhhhhhhhhhhh
Q 009761 171 KEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNAD----ECLMTRMQEMSLDYHFTVEQE 246 (526)
Q Consensus 171 n~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 246 (526)
|.|++.+ ++|||+++|+|..++|+++.+++..+. +++.++|.|.......+ .++............ ....
T Consensus 75 ~~g~~~a---~gd~i~~ld~D~~~~~~~l~~l~~~~~-~~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 148 (211)
T cd04188 75 RAGMLAA---RGDYILFADADLATPFEELEKLEEALK-TSGYDIAIGSRAHLASAAVVKRSWLRNLLGRGFNFL--VRLL 148 (211)
T ss_pred HHHHHHh---cCCEEEEEeCCCCCCHHHHHHHHHHHh-ccCCcEEEEEeeccCCcccccccHHHHHHHHHHHHH--HHHH
Confidence 9999999 999999999999999999999999863 44556666665433321 133333222111111 1111
Q ss_pred ccccCCCcccccccceeeeHHHHHHcCCCC-CCCccchHHHHHHHHhCCCeEEEeccccccccCCc
Q 009761 247 VGSSTYAFFGFNGTAGVWRISALNEAGGWK-DRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPS 311 (526)
Q Consensus 247 ~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~-~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~ 311 (526)
.+.... ....+..++||++++++++.. .....+|.|+..++.+.|+++.++| ..+.+.|.
T Consensus 149 ~~~~~~---d~~~g~~~~~r~~~~~~~~~~~~~~~~~d~el~~r~~~~g~~~~~vp--i~~~~~~~ 209 (211)
T cd04188 149 LGLGIK---DTQCGFKLFTRDAARRLFPRLHLERWAFDVELLVLARRLGYPIEEVP--VRWVEIPG 209 (211)
T ss_pred cCCCCc---ccccCceeEcHHHHHHHHhhhhccceEeeHHHHHHHHHcCCeEEEcC--cceecCCC
Confidence 111111 112346799999999986543 3456789999999999999999999 45555554
No 61
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.81 E-value=4.8e-19 Score=173.09 Aligned_cols=199 Identities=15% Similarity=0.110 Sum_probs=132.0
Q ss_pred cCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCch-hHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhh
Q 009761 99 MYNEK-EVYQLSIGAACGLSWPSDRITIQVLDDSTDP-TIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKH 176 (526)
Q Consensus 99 ~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~-t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~ 176 (526)
+||++ +.++++++|+.+|.+ .+|+|+|+|+|+ +.+.+.+ + ..++++++.++ +.|.++|+|.|++.
T Consensus 2 tyn~~~~~l~~~l~sl~~q~~----~iiVVDN~S~~~~~~~~~~~----~----~~~i~~i~~~~-N~G~a~a~N~Gi~~ 68 (281)
T TIGR01556 2 TFNPDLEHLGELITSLPKQVD----RIIAVDNSPHSDQPLKNARL----R----GQKIALIHLGD-NQGIAGAQNQGLDA 68 (281)
T ss_pred ccCccHHHHHHHHHHHHhcCC----EEEEEECcCCCcHhHHHHhc----c----CCCeEEEECCC-CcchHHHHHHHHHH
Confidence 79975 899999999999852 234355555543 3332221 1 35788885444 44599999999999
Q ss_pred hcccCCcEEEEecCCCCCChHHHHHHHhhhhcCC-CEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCcc
Q 009761 177 SYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNP-DIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFF 255 (526)
Q Consensus 177 a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~-~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (526)
|...++|||+++|+|+.++|+++++++..+++++ +++++++.....+. ............... ..............
T Consensus 69 a~~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 146 (281)
T TIGR01556 69 SFRRGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGT-SRRLPAIHLDGLLLR-QISLDGLTTPQKTS 146 (281)
T ss_pred HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCC-cccCCceeeccccee-eecccccCCceecc
Confidence 8545789999999999999999999999986555 78887765422111 110000000000000 00000000111111
Q ss_pred cccccceeeeHHHHHHcCCCCCCC--ccchHHHHHHHHhCCCeEEEeccccccccCCcC
Q 009761 256 GFNGTAGVWRISALNEAGGWKDRT--TVEDMDLAVRASLKGWKFVYVGDLKVKNELPST 312 (526)
Q Consensus 256 ~~~G~~~~~Rr~~l~~~gg~~~~~--~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t 312 (526)
...++++++||++++++|+|+++. ..||.|+++|+.++|+++.++|++.++|....+
T Consensus 147 ~~~~sg~li~~~~~~~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~~ 205 (281)
T TIGR01556 147 FLISSGCLITREVYQRLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPDIVLEHRIGDS 205 (281)
T ss_pred EEEcCcceeeHHHHHHhCCccHhhcccchHHHHHHHHHHCCCEEEEeCCEEEEEecCCc
Confidence 233566799999999999999964 468999999999999999999999998876654
No 62
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.80 E-value=3.6e-18 Score=166.34 Aligned_cols=207 Identities=22% Similarity=0.297 Sum_probs=131.7
Q ss_pred EEEEecCCChH------HHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCC--CC
Q 009761 94 LVQIPMYNEKE------VYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRN--GY 165 (526)
Q Consensus 94 sViIp~yne~~------~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~--g~ 165 (526)
|||||++++.. .++.+|+++..+.-+ ..++|+|+|++++++..+.+++.+++. ....++...... -+
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~-~~~eiIvvd~~s~~~~~~~l~~~~~~~----~~~~~i~~~~~~~~f~ 75 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSD-PDFEIIVVDDGSSDEFDEELKKLCEKN----GFIRYIRHEDNGEPFS 75 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCchhHHHHHHHHHhcc----CceEEEEcCCCCCCcC
Confidence 79999999993 455567777764333 335555666544444333444444441 233355333222 26
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHh---hhhcCCCEEEEeeEEEEecCCCcHHHH-HHHHhhhhhh
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIP---FLVHNPDIALVQARWKFVNADECLMTR-MQEMSLDYHF 241 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~---~~~~~~~v~~V~~~~~~~~~~~~~~~~-~~~~~~~~~~ 241 (526)
++.|+|.|++.| ++|+|+++|+|++++|+++++++. .+.++++ .++..+..+.+.+.+.... ..........
T Consensus 76 ~a~arN~g~~~A---~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~-~~~~~p~~yl~~~~~~~~~~~~~~~~~~~~ 151 (281)
T PF10111_consen 76 RAKARNIGAKYA---RGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPN-AFLVYPCLYLSEEGSEKFYSQFKNLWDHEF 151 (281)
T ss_pred HHHHHHHHHHHc---CCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCC-ceEEEeeeeccchhhHHHhhcchhcchHHH
Confidence 999999999999 999999999999999999999999 5644443 3333444444433221110 0000000000
Q ss_pred h-hhhhccccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEeccccccccC
Q 009761 242 T-VEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDLKVKNEL 309 (526)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~ 309 (526)
. ......+.........|++++++|+.+.++|||||+. ..||.|++.|+.+.|.++...++..+++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~~ 223 (281)
T PF10111_consen 152 LESFISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHSH 223 (281)
T ss_pred HHHHhhccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhccccc
Confidence 0 0001111122223356789999999999999999965 679999999999999999999998886533
No 63
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.80 E-value=4.8e-19 Score=166.79 Aligned_cols=233 Identities=16% Similarity=0.194 Sum_probs=182.2
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
+.+|.|||+.|..+-++.+.++++|....+|+..+ .++++++++|+..+ +++.+.++|+.-+.++.+-..+.....|-
T Consensus 82 ~~LPgVSiikPl~G~d~nl~~Nlesffts~Y~~~E-lLfcv~s~eDpAi~-vv~~Ll~kyp~VdAklf~gG~~vg~npKI 159 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKGVDPNLYHNLESFFTSQYHKYE-LLFCVESSEDPAIE-VVERLLKKYPNVDAKLFFGGEKVGLNPKI 159 (431)
T ss_pred CCCCCceEEeecccCCchhHHhHHHHHhhccCceE-EEEEEccCCCcHHH-HHHHHHhhCCCcceEEEEcccccccChhh
Confidence 46899999999999999999999999999999644 45688999999988 88889999874444443332222334699
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhc
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEV 247 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (526)
+|+.-|.+.+ ++|+|++.|+|....||.+..++..|+..++.+.|.+.....++++ +-..+....+...+......
T Consensus 160 nN~mpgy~~a---~ydlvlisDsgI~m~pdtildm~t~M~shekmalvtq~py~~dr~G-f~atle~~~fgTsh~r~yl~ 235 (431)
T KOG2547|consen 160 NNMMPGYRAA---KYDLVLISDSGIFMKPDTILDMATTMMSHEKMALVTQTPYCKDRQG-FDATLEQVYFGTSHPRIYLS 235 (431)
T ss_pred hccCHHHHHh---cCCEEEEecCCeeecCchHHHHHHhhhcccceeeecCCceeecccc-chhhhhheeeccCCceEEEc
Confidence 9999999999 9999999999999999999999999988889999988887776644 22222222222222221111
Q ss_pred cccCCCcccccccceeeeHHHHHHcCCCCC--CCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhc
Q 009761 248 GSSTYAFFGFNGTAGVWRISALNEAGGWKD--RTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSC 325 (526)
Q Consensus 248 ~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~--~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~ 325 (526)
....++.|.+|-.++.||+++++.||... ..+.||+..+..+..+||+..+.....-.+..-.+...+.+|-.||.+
T Consensus 236 -~n~~~~~c~tgms~~mrK~~ld~~ggi~~f~~yLaedyFaaksllSRG~ksaist~palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 236 -GNVLGFNCSTGMSSMMRKEALDECGGISAFGGYLAEDYFAAKSLLSRGWKSAISTHPALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred -cccccccccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhhHHHHHHHHHHHhhh
Confidence 22334556778899999999999999876 448999999999999999999988777777777889999999999987
Q ss_pred ch
Q 009761 326 GP 327 (526)
Q Consensus 326 G~ 327 (526)
=.
T Consensus 315 Lr 316 (431)
T KOG2547|consen 315 LR 316 (431)
T ss_pred hh
Confidence 53
No 64
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.79 E-value=2.5e-18 Score=157.00 Aligned_cols=179 Identities=19% Similarity=0.161 Sum_probs=121.2
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEE-cCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHH
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVL-DDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEG 173 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~-D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~g 173 (526)
|+||+||+++.+.+||+|+.+|.++....+|+|+ |+|+|++.+ .++...+++ ..++++..+++ .|+++|+|.|
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~-~~~~~~~~~----~~~~~~~~~~n-~G~~~a~n~g 74 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAE-IARELAARV----PRVRVIRLSRN-FGKGAAVRAG 74 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHH-HHHHHHHhC----CCeEEEEccCC-CCccHHHHHH
Confidence 6899999999999999999999884333444455 457777755 555554442 44556644444 4599999999
Q ss_pred hhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCC--CcHHHHHHHHhhhhhhhhhhhccccC
Q 009761 174 MKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNAD--ECLMTRMQEMSLDYHFTVEQEVGSST 251 (526)
Q Consensus 174 l~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (526)
++.+ ++|+++++|+|+.++|++|++++..+ .+++.++|.|.....+.. .....+........ .......
T Consensus 75 ~~~a---~gd~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--- 145 (185)
T cd04179 75 FKAA---RGDIVVTMDADLQHPPEDIPKLLEKL-LEGGADVVIGSRFVRGGGAGMPLLRRLGSRLFNF--LIRLLLG--- 145 (185)
T ss_pred HHHh---cCCEEEEEeCCCCCCHHHHHHHHHHH-hccCCcEEEEEeecCCCcccchHHHHHHHHHHHH--HHHHHcC---
Confidence 9999 99999999999999999999999986 345677787776544432 22333322111111 1111111
Q ss_pred CCcccccccceeeeHHHHHHc--CCCCCCCccchHHHHHH
Q 009761 252 YAFFGFNGTAGVWRISALNEA--GGWKDRTTVEDMDLAVR 289 (526)
Q Consensus 252 ~~~~~~~G~~~~~Rr~~l~~~--gg~~~~~~~ED~~l~~r 289 (526)
.......|+++++||++++++ |++++ ...+|+++.+|
T Consensus 146 ~~~~~~~~~~~~~~r~~~~~i~~~~~~~-~~~~~~~~~~~ 184 (185)
T cd04179 146 VRISDTQSGFRLFRREVLEALLSLLESN-GFEFGLELLVG 184 (185)
T ss_pred CCCcCCCCceeeeHHHHHHHHHhhcccc-CcceeeEeeec
Confidence 122235588899999999999 44544 46677777655
No 65
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.77 E-value=9.2e-18 Score=164.38 Aligned_cols=198 Identities=20% Similarity=0.109 Sum_probs=128.2
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCC-CCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCC
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSW-PSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYK 166 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~y-p~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K 166 (526)
...|++||+||+|||++.|.++|+++.+|.+ +....+|+|+|+|+|+|.+ ++++...+.. .....+.....+.||
T Consensus 28 ~~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~-ia~~~~~~v~---~~~~~~~~~~~n~Gk 103 (306)
T PRK13915 28 KAGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAE-RAAAAGARVV---SREEILPELPPRPGK 103 (306)
T ss_pred cCCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHH-HHHHhcchhh---cchhhhhccccCCCH
Confidence 3568899999999999999999999998865 2223455577789999987 4443321110 011111122445679
Q ss_pred ccHHHHHhhhhcccCCcEEEEecCCCC-CChHHHHHHHhhhhcCCCEEEEeeEEEEec--------CCCcHHHHH-HHHh
Q 009761 167 AGALKEGMKHSYVKQCDYVAIFDADFE-PEPDFLWRTIPFLVHNPDIALVQARWKFVN--------ADECLMTRM-QEMS 236 (526)
Q Consensus 167 ~~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~--------~~~~~~~~~-~~~~ 236 (526)
+.|+|.|++.+ ++|+++++|+|+. ++|+++.+++..+..+|++++|.|...... ......++. ....
T Consensus 104 g~A~~~g~~~a---~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~~~~~~~~~~~~~gr~~~~~~~~l 180 (306)
T PRK13915 104 GEALWRSLAAT---TGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRPLRVSGGVDATGGGRVTELVARPL 180 (306)
T ss_pred HHHHHHHHHhc---CCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccccccccccCcCCCCchHHHHHHHH
Confidence 99999999998 9999999999997 899999999999866899999988532110 001111221 1111
Q ss_pred hhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHh-CCC-eEEEec
Q 009761 237 LDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASL-KGW-KFVYVG 301 (526)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~-~G~-~~~~~~ 301 (526)
+...... ........++..++||++++++ .++.+ ...|.++...+.+ .|. ++..++
T Consensus 181 ~~~~~~~-------l~~i~dp~sG~~a~rr~~l~~l-~~~~~-yg~e~~~l~~~~~~~g~~~i~~V~ 238 (306)
T PRK13915 181 LNLLRPE-------LAGFVQPLGGEYAGRRELLESL-PFVPG-YGVEIGLLIDTLDRLGLDAIAQVD 238 (306)
T ss_pred HHHHHHh-------hhcccCcchHhHHHHHHHHHhC-CCCCC-CeehHHHHHHHHHHhCcCceEEEE
Confidence 1111000 0011112234579999999998 46543 5568888888764 576 565555
No 66
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.77 E-value=1.2e-17 Score=175.98 Aligned_cols=147 Identities=21% Similarity=0.316 Sum_probs=132.0
Q ss_pred cCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCcccccc
Q 009761 180 KQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNG 259 (526)
Q Consensus 180 ~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 259 (526)
+.-|+|+++|+|+.+.|+.+.++++.|+.||+||+++| +..|..++|+...|.++|...+...+..++..+...|.+|
T Consensus 439 ~~v~~il~vD~dT~~~P~ai~~lv~~f~~dp~VggaCG--~I~~~~~~w~v~~Q~FEY~Ish~l~Ka~ESvFG~VsclPG 516 (862)
T KOG2571|consen 439 PSVDYILVVDADTRLDPDALYHLVKVFDEDPQVGGACG--RILNKGGSWVVAYQNFEYAISHNLQKATESVFGCVSCLPG 516 (862)
T ss_pred CcceEEEEecCCCccCcHHHHHHHHHhccCcccceecc--ccccCCCceEEeHHHHHHHHHHHHHHhhhhhceeEEecCc
Confidence 56679999999999999999999999999999999999 4667778899999999999999999999999999999999
Q ss_pred cceeeeHHHHHHcC----------C---CCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHhhhcc
Q 009761 260 TAGVWRISALNEAG----------G---WKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCG 326 (526)
Q Consensus 260 ~~~~~Rr~~l~~~g----------g---~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 326 (526)
+.++||-+++.+-- + .--...+||..|+.++..+||++.|++++.+.++.|+++.+++.||+||..|
T Consensus 517 cfs~yR~~aL~~~~~~~~y~~~~~~~~~~~~~~~geDR~L~~~llskgy~l~Y~a~s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 517 CFSLYRASALMDQFVEYFYGEKFSGPRHGIQYSLGEDRWLCTLLLSKGYRLKYVAASDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred hhHHHHHHHHhcchHHhhhchhhcCcccccccccchhHHHHHHHHhccceeeeeccccccccCcHhHHHHHHHhhhhccc
Confidence 99999998886531 0 0012389999999999999999999999999999999999999999999999
Q ss_pred hH
Q 009761 327 PA 328 (526)
Q Consensus 327 ~~ 328 (526)
.+
T Consensus 597 ~f 598 (862)
T KOG2571|consen 597 IF 598 (862)
T ss_pred ch
Confidence 44
No 67
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.77 E-value=2.1e-19 Score=160.71 Aligned_cols=169 Identities=26% Similarity=0.310 Sum_probs=109.9
Q ss_pred EEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHH
Q 009761 94 LVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEG 173 (526)
Q Consensus 94 sViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~g 173 (526)
||+||+||+++.++++|+|+.+|+++..++ |+|+|+|+|++.+ ++++..+ .+.++++++.+++. |++.++|.|
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~~ei-ivvdd~s~d~~~~-~~~~~~~----~~~~i~~i~~~~n~-g~~~~~n~~ 73 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPDFEI-IVVDDGSTDETEE-ILEEYAE----SDPNIRYIRNPENL-GFSAARNRG 73 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCEEEE-EEEECS-SSSHHH-HHHHHHC----CSTTEEEEEHCCCS-HHHHHHHHH
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCCEEE-EEecccccccccc-ccccccc----cccccccccccccc-ccccccccc
Confidence 799999999999999999999997665443 3366667777766 5555433 35789999766665 599999999
Q ss_pred hhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCC
Q 009761 174 MKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYA 253 (526)
Q Consensus 174 l~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (526)
++.+ ++||++++|+|+.++|+++++++..+++++. +++.+.......+............................
T Consensus 74 ~~~a---~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (169)
T PF00535_consen 74 IKHA---KGEYILFLDDDDIISPDWLEELVEALEKNPP-DVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWK 149 (169)
T ss_dssp HHH-----SSEEEEEETTEEE-TTHHHHHHHHHHHCTT-EEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTT
T ss_pred cccc---ceeEEEEeCCCceEcHHHHHHHHHHHHhCCC-cEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCC
Confidence 9999 9999999999999999999999999966444 44444444333222111110000000000011111222333
Q ss_pred cccccccceeeeHHHHHHcC
Q 009761 254 FFGFNGTAGVWRISALNEAG 273 (526)
Q Consensus 254 ~~~~~G~~~~~Rr~~l~~~g 273 (526)
.....|++.++||++++++|
T Consensus 150 ~~~~~~~~~~~rr~~~~~~~ 169 (169)
T PF00535_consen 150 ISFFIGSCALFRRSVFEEIG 169 (169)
T ss_dssp SSEESSSCEEEEEHHHHHCH
T ss_pred cccccccEEEEEHHHHHhhC
Confidence 44467999999999999985
No 68
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.76 E-value=1.7e-15 Score=150.02 Aligned_cols=191 Identities=16% Similarity=0.180 Sum_probs=124.1
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHc---CCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACG---LSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~---q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
+++||+||+|||++.+.++++++.+ |..+ +.++|+|+|+|+|+|.+ ++++..++ .+.+++.+. .+++.||+
T Consensus 6 ~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~-~~EIIvVDDgS~D~T~~-il~~~~~~---~~~~v~~i~-~~~n~G~~ 79 (325)
T PRK10714 6 KKVSVVIPVYNEQESLPELIRRTTAACESLGK-EYEILLIDDGSSDNSAE-MLVEAAQA---PDSHIVAIL-LNRNYGQH 79 (325)
T ss_pred CeEEEEEcccCchhhHHHHHHHHHHHHHhCCC-CEEEEEEeCCCCCcHHH-HHHHHHhh---cCCcEEEEE-eCCCCCHH
Confidence 5799999999999999999888753 4333 33455577779999987 44444332 134565553 34556699
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhc
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEV 247 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (526)
+|+|.|+++| ++|+++++|+|...+|+.+.++++.+++ +.++|.+... +...++..+.-...+... .....
T Consensus 80 ~A~~~G~~~A---~gd~vv~~DaD~q~~p~~i~~l~~~~~~--~~DvV~~~r~--~~~~~~~r~~~s~~~~~l--~~~~~ 150 (325)
T PRK10714 80 SAIMAGFSHV---TGDLIITLDADLQNPPEEIPRLVAKADE--GYDVVGTVRQ--NRQDSWFRKTASKMINRL--IQRTT 150 (325)
T ss_pred HHHHHHHHhC---CCCEEEEECCCCCCCHHHHHHHHHHHHh--hCCEEEEEEc--CCCCcHHHHHHHHHHHHH--HHHHc
Confidence 9999999999 9999999999999999999999999853 3556666543 333455544432222111 11111
Q ss_pred cccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccc
Q 009761 248 GSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDL 303 (526)
Q Consensus 248 ~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~ 303 (526)
+..... ..+..-++||++++++-..++.. ..+...+...|+++..+|-.
T Consensus 151 g~~~~d---~~~gfr~~~r~~~~~l~~~~~~~----~~~~~l~~~~g~~i~evpv~ 199 (325)
T PRK10714 151 GKAMGD---YGCMLRAYRRHIVDAMLHCHERS----TFIPILANTFARRAIEIPVH 199 (325)
T ss_pred CCCCCC---CCcCeEEEcHHHHHHHHHCCCCc----cHHHHHHHHcCCCEEEEEeE
Confidence 211111 12224589999999874333321 23344556779998888743
No 69
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.76 E-value=2.8e-17 Score=149.56 Aligned_cols=175 Identities=19% Similarity=0.151 Sum_probs=118.7
Q ss_pred EEEecCCChHHHHHHHHHHHcCC---CCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHH
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLS---WPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALK 171 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~---yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln 171 (526)
|+||+|||++.+.++++++.++. ++..+ +|+|+|+|+|++.+ ..+...++ ..+++++...+ +.|+++|+|
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~e-iivvdd~s~d~t~~-~~~~~~~~----~~~i~~i~~~~-n~G~~~a~n 73 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYE-IIFVDDGSTDRTLE-ILRELAAR----DPRVKVIRLSR-NFGQQAALL 73 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeE-EEEEeCCCCccHHH-HHHHHHhh----CCCEEEEEecC-CCCcHHHHH
Confidence 68999999999999998887643 44433 44466778898876 55555444 34677775544 456999999
Q ss_pred HHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccC
Q 009761 172 EGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSST 251 (526)
Q Consensus 172 ~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (526)
.|++.+ ++|+++++|+|+.++|+++++++..++ ++.++|.|.....+ .+...+.....+..... ....
T Consensus 74 ~g~~~a---~~d~i~~~D~D~~~~~~~l~~l~~~~~--~~~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~--~~~~--- 141 (181)
T cd04187 74 AGLDHA---RGDAVITMDADLQDPPELIPEMLAKWE--EGYDVVYGVRKNRK--ESWLKRLTSKLFYRLIN--KLSG--- 141 (181)
T ss_pred HHHHhc---CCCEEEEEeCCCCCCHHHHHHHHHHHh--CCCcEEEEEecCCc--chHHHHHHHHHHHHHHH--HHcC---
Confidence 999999 999999999999999999999999863 34566666654333 33333332211111111 1111
Q ss_pred CCcccccccceeeeHHHHHHcCCCCCCC-ccchHHHHH
Q 009761 252 YAFFGFNGTAGVWRISALNEAGGWKDRT-TVEDMDLAV 288 (526)
Q Consensus 252 ~~~~~~~G~~~~~Rr~~l~~~gg~~~~~-~~ED~~l~~ 288 (526)
.......|++.++||++++++|+|++.. ..+|.+...
T Consensus 142 ~~~~~~~~~~~~~~r~~~~~i~~~d~~~~~~~~~~~~~ 179 (181)
T cd04187 142 VDIPDNGGDFRLMDRKVVDALLLLPERHRFLRGLIAWV 179 (181)
T ss_pred CCCCCCCCCEEEEcHHHHHHHHhcCCCCccHHHHHHHh
Confidence 1122245778899999999999999854 556655543
No 70
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.66 E-value=2.9e-15 Score=131.24 Aligned_cols=153 Identities=27% Similarity=0.343 Sum_probs=120.0
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHh
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl 174 (526)
|+||++|+.+.++++++|+.+|+++..+ +++++|+++|++.+ ..++..+. ....... ....+.|+++++|.++
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~~~-i~i~~~~~~~~~~~-~~~~~~~~----~~~~~~~-~~~~~~g~~~~~~~~~ 73 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPNFE-VIVVDDGSTDGTLE-ILEEYAKK----DPRVIRV-INEENQGLAAARNAGL 73 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccceE-EEEEeCCCCccHHH-HHHHHHhc----CCCeEEE-EecCCCChHHHHHHHH
Confidence 5899999999999999999999986544 33355556666655 44433222 1234444 3445566999999999
Q ss_pred hhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCc
Q 009761 175 KHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAF 254 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (526)
+.+ ++|+++++|+|..++|+++..++..+..+++.+++++.
T Consensus 74 ~~~---~~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~~~------------------------------------ 114 (156)
T cd00761 74 KAA---RGEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP------------------------------------ 114 (156)
T ss_pred HHh---cCCEEEEECCCCccCccHHHHHHHHHhcCCCceEEecc------------------------------------
Confidence 999 99999999999999999999986666578888888776
Q ss_pred ccccccceeeeHHHHHHcCCCCCCCc--cchHHHHHHHHhCCCeEE
Q 009761 255 FGFNGTAGVWRISALNEAGGWKDRTT--VEDMDLAVRASLKGWKFV 298 (526)
Q Consensus 255 ~~~~G~~~~~Rr~~l~~~gg~~~~~~--~ED~~l~~rl~~~G~~~~ 298 (526)
++++++++.++++|++++... .||.++..++...|++..
T Consensus 115 -----~~~~~~~~~~~~~~~~~~~~~~~~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 115 -----GNLLFRRELLEEIGGFDEALLSGEEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred -----chheeeHHHHHHhCCcchHhcCCcchHHHHHHHHhhccccc
Confidence 589999999999999988554 599999999999887653
No 71
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=99.63 E-value=1.3e-14 Score=124.07 Aligned_cols=197 Identities=20% Similarity=0.197 Sum_probs=131.8
Q ss_pred CcEEEEEecCCChHHHH---HHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 91 PMVLVQIPMYNEKEVYQ---LSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 91 P~VsViIp~yne~~~l~---~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
++-||++|+|||.+++. +.+.....+.-.+ .++|+|+|+|.|.|.+ .++++.+.+. +.++....|.+..| -+
T Consensus 3 ~kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~-~eiIivDD~SpDGt~~-~a~~L~k~yg--~d~i~l~pR~~klG-Lg 77 (238)
T KOG2978|consen 3 IKYSVILPTYNEKENLPIITRLIAKYMSEEGKK-YEIIIVDDASPDGTQE-VAKALQKIYG--EDNILLKPRTKKLG-LG 77 (238)
T ss_pred cceeEEeccccCCCCCeeeHHHHHhhhhhhcCc-eEEEEEeCCCCCccHH-HHHHHHHHhC--CCcEEEEeccCccc-ch
Confidence 56899999999996555 4444443333222 2455577889999987 6777666653 45677776666665 88
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCC-CcH--HHHHHHHhhhhhhhhh
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNAD-ECL--MTRMQEMSLDYHFTVE 244 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~ 244 (526)
.|.-.|+++| +|||++++|||-.-+|.++.++.+.. ++.+.++|.|.....+.. ..| ..+.....-+ ...
T Consensus 78 tAy~hgl~~a---~g~fiviMDaDlsHhPk~ipe~i~lq-~~~~~div~GTRYa~~ggV~gW~mkRk~IS~gAn---~la 150 (238)
T KOG2978|consen 78 TAYIHGLKHA---TGDFIVIMDADLSHHPKFIPEFIRLQ-KEGNYDIVLGTRYAGGGGVYGWDMKRKIISRGAN---FLA 150 (238)
T ss_pred HHHHhhhhhc---cCCeEEEEeCccCCCchhHHHHHHHh-hccCcceeeeeeEcCCCceecchhhHHHHhhhhH---HHH
Confidence 9999999999 99999999999999999999999875 566778888876544432 111 1111111100 111
Q ss_pred hhccccCCCcccccccceeeeHHHHHHcCCCCCCC----ccchHHHHHHHHhCCCeEEEecccc
Q 009761 245 QEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT----TVEDMDLAVRASLKGWKFVYVGDLK 304 (526)
Q Consensus 245 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~----~~ED~~l~~rl~~~G~~~~~~~~~~ 304 (526)
+..- ..+...++|++.++||++++.. .+++ ..=-+|+-.|+.+.|+.+.-+|-..
T Consensus 151 ~~ll--~~~~sdltGsFrLykk~vl~~l---i~e~vSkGyvfqmEll~ra~~~~y~IgEvPitF 209 (238)
T KOG2978|consen 151 RILL--NPGVSDLTGSFRLYKKEVLEKL---IEESVSKGYVFQMELLARARQHGYTIGEVPITF 209 (238)
T ss_pred HHhc--cCCCccCcceeeeehHHHHHhh---HHHhhccchhhhHHHHHhccccCceEeecceEE
Confidence 1111 0223336799999999999875 2222 3345788888889998887777443
No 72
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.52 E-value=1.9e-13 Score=129.25 Aligned_cols=105 Identities=19% Similarity=0.104 Sum_probs=84.6
Q ss_pred cEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHH
Q 009761 92 MVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALK 171 (526)
Q Consensus 92 ~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln 171 (526)
+|||+||+|||++.+++||+|+..|. + .+|+|+|+|+|+|.+ +++. .++++++. ++.|.+.++|
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~~---~-eiivvD~gStD~t~~-i~~~---------~~~~v~~~--~~~g~~~~~n 64 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWAV---D-EIIVVDSGSTDRTVE-IAKE---------YGAKVYQR--WWDGFGAQRN 64 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhccc---C-EEEEEeCCCCccHHH-HHHH---------cCCEEEEC--CCCChHHHHH
Confidence 48999999999999999999998773 2 345577789999876 4442 23455544 5556999999
Q ss_pred HHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEE
Q 009761 172 EGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALV 215 (526)
Q Consensus 172 ~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V 215 (526)
.|++.+ ++|||+++|+|..++|++++++...++++|..+..
T Consensus 65 ~~~~~a---~~d~vl~lDaD~~~~~~~~~~l~~~~~~~~~~~~~ 105 (229)
T cd02511 65 FALELA---TNDWVLSLDADERLTPELADEILALLATDDYDGYY 105 (229)
T ss_pred HHHHhC---CCCEEEEEeCCcCcCHHHHHHHHHHHhCCCCcEEE
Confidence 999999 99999999999999999999999998766654433
No 73
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=1.5e-12 Score=123.94 Aligned_cols=231 Identities=17% Similarity=0.108 Sum_probs=158.7
Q ss_pred CCCCcEEEEEecCCCh-HHHHHHHHHHHcCCCCCC-ceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCC
Q 009761 88 SAYPMVLVQIPMYNEK-EVYQLSIGAACGLSWPSD-RITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGY 165 (526)
Q Consensus 88 ~~~P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~-~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 165 (526)
.++|..||||+-+||+ ..+-+|+.|++++.-++. +++|+|+|.|.|++.-...... .++++++.+++.|
T Consensus 121 ~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped~~~L~ri--------~kvr~LRN~~ReG- 191 (559)
T KOG3738|consen 121 VDLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPEDGKLLKRI--------PKVRVLRNNEREG- 191 (559)
T ss_pred cCCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHHHHHHhhh--------heeeeecccchhh-
Confidence 3578999999999999 789999999999875443 3455567779988755443322 5777874444444
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHH-----HHhhhhh
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQ-----EMSLDYH 240 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~-----~~~~~~~ 240 (526)
-...++.|.+.| ++.++.|+|+.+.+..+||+-++....+|+ ..+|+.-....|.+.--..... .+.+..+
T Consensus 192 LirSRvrGAdvA---~a~vltFLDSHcEvN~~WLePLL~Rvaed~-trvVsPiiDvIn~dnf~Y~~asadLrGGFDWsLh 267 (559)
T KOG3738|consen 192 LIRSRVRGADVA---QATVLTFLDSHCEVNEGWLEPLLERVAEDT-TRVVSPIIDVINLDNFSYVGASADLRGGFDWSLH 267 (559)
T ss_pred hhhhhccccccc---cceEEEEEecceeecchhhHHHHHHHhhcc-cceeecccccccccccccccchhhhcCCcceEEE
Confidence 888899999999 999999999999999999999999885554 3455555555555421111100 0112223
Q ss_pred hhhhhh-----c-c---ccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEeccccc---
Q 009761 241 FTVEQE-----V-G---SSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDLKV--- 305 (526)
Q Consensus 241 ~~~~~~-----~-~---~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~~--- 305 (526)
|..++. . + ..--....+.|.-.++.|+.++++|.||.+. .+|..|+++|+...|-....+|-..+
T Consensus 268 F~We~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHV 347 (559)
T KOG3738|consen 268 FKWEQMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHV 347 (559)
T ss_pred EEehhcCHHHHhhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhh
Confidence 322221 1 1 0111123367989999999999999999865 78999999999999999999887665
Q ss_pred ------cccCCcChHHHHHHHHhhhcchHHHH
Q 009761 306 ------KNELPSTFKAYRYQQHRWSCGPANLF 331 (526)
Q Consensus 306 ------~~~~p~t~~~~~~Qr~RW~~G~~~~~ 331 (526)
++-.+.+-..|.+.-+|-+.-.++-.
T Consensus 348 FRkrHpy~FP~gs~~ty~~NTkr~AEvWmDEY 379 (559)
T KOG3738|consen 348 FRKRHPYTFPGGSGNTYIKNTKRAAEVWMDEY 379 (559)
T ss_pred hhccCCCcCCCCCCcchhhcchHHHHHHHHHH
Confidence 22333455566666666554444433
No 74
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.38 E-value=2.6e-12 Score=119.77 Aligned_cols=106 Identities=26% Similarity=0.292 Sum_probs=84.5
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccH
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGA 169 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~a 169 (526)
.|.+||+||+||+++.+.++|+|+.+|+|++.+ +|+|+|+|+|+|.+ +++....+. .++... ...+++|++.|
T Consensus 2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~-~~~~~~~~~----~~~~~~-~~~~~~g~~~~ 74 (291)
T COG0463 2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTE-IAIEYGAKD----VRVIRL-INERNGGLGAA 74 (291)
T ss_pred CccEEEEEeccchhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHH-HHHHHhhhc----ceEEEe-ecccCCChHHH
Confidence 478999999999999999999999999999744 55577889999988 555443331 233333 44566679999
Q ss_pred HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 170 LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 170 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
+|.|+..+ .+|++.++|+|.. +++.+..+....
T Consensus 75 ~~~~~~~~---~~~~~~~~d~d~~-~~~~~~~~~~~~ 107 (291)
T COG0463 75 RNAGLEYA---RGDYIVFLDADDQ-HPPELIPLVAAG 107 (291)
T ss_pred HHhhHHhc---cCCEEEEEccCCC-CCHHHHHHHHHh
Confidence 99999999 8899999999999 988888755443
No 75
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=2.2e-12 Score=122.52 Aligned_cols=212 Identities=16% Similarity=0.094 Sum_probs=145.6
Q ss_pred CCCCCcEEEEEecCCCh-HHHHHHHHHHHcCCCCCC-ceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC
Q 009761 87 NSAYPMVLVQIPMYNEK-EVYQLSIGAACGLSWPSD-RITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNG 164 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~-~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 164 (526)
++++|.+||+|.-+||. ..+.+|+.|++...-+.. ..+|.|+|.|+.+..++-.+++...+ +..++++ |++++-
T Consensus 151 pe~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKehLkekLDeYv~~f---nGlVkV~-Rne~RE 226 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKEHLKEKLDEYVKLF---NGLVKVF-RNERRE 226 (603)
T ss_pred cccCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccHHHHHHHHHHHHHh---cCEEEEE-ecchhh
Confidence 57899999999999999 899999999997654433 23455666688887777777777776 3456666 454444
Q ss_pred CCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEE------eeEE-EEe---cCCCcHHHHHHH
Q 009761 165 YKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALV------QARW-KFV---NADECLMTRMQE 234 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V------~~~~-~~~---~~~~~~~~~~~~ 234 (526)
|-..|+..|.+.| .||.++++||.|.+.-+|+.-+++.+..|..|.-| .++. .++ ..++.-.....+
T Consensus 227 GLI~aRSiGA~~a---tGeV~ifLDAHCEVntNWlpPLlAPI~rdRtvmTVP~IDgId~n~~EyrpvyG~dn~h~rGife 303 (603)
T KOG3737|consen 227 GLIQARSIGAQKA---TGEVLIFLDAHCEVNTNWLPPLLAPISRDRTVMTVPLIDGIDGNTYEYRPVYGGDNDHARGIFE 303 (603)
T ss_pred hhhhhhccchhhc---cccEEEEEecceeeecccccccccccccCceEEEEeeeeeecCCceEEeeccCCcchhhcchhh
Confidence 4888999999999 99999999999999999999999998666544322 2211 111 111111111111
Q ss_pred Hh--hhhhh--hhhhh---ccccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEecccc
Q 009761 235 MS--LDYHF--TVEQE---VGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDLK 304 (526)
Q Consensus 235 ~~--~~~~~--~~~~~---~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~ 304 (526)
.. +.... ..++. ..+.-.......|..+++.|+.+.++|.+|+.. .+|.+++++++.+.|-++.++|-..
T Consensus 304 WgmLyKe~~~t~rE~r~RkhnsePyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fVPCSr 383 (603)
T KOG3737|consen 304 WGMLYKEVPLTPREKRLRKHNSEPYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFVPCSR 383 (603)
T ss_pred hhheeccCCCCHHHHHhhhccCCCCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEEEccc
Confidence 10 00000 01111 111111122255889999999999999999965 6799999999999999999999766
Q ss_pred c
Q 009761 305 V 305 (526)
Q Consensus 305 ~ 305 (526)
+
T Consensus 384 V 384 (603)
T KOG3737|consen 384 V 384 (603)
T ss_pred c
Confidence 5
No 76
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=99.36 E-value=5.8e-11 Score=108.93 Aligned_cols=208 Identities=19% Similarity=0.139 Sum_probs=126.2
Q ss_pred cEEEEEecCCChH----HHHHHHHHHHcCCCCC---Cce-EEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCC
Q 009761 92 MVLVQIPMYNEKE----VYQLSIGAACGLSWPS---DRI-TIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRN 163 (526)
Q Consensus 92 ~VsViIp~yne~~----~l~~~L~sl~~q~yp~---~~~-~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~ 163 (526)
-+||+||+|||+. .+.++++++. ..|.. ... +++|+|+|+|.|.+ ++-+++.++. ..+++++...+|.
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le-~ry~~~~~F~~eiiVvddgs~d~T~~-~a~k~s~K~~--~d~irV~~l~~nr 143 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLE-KRYLSDKSFTYEIIVVDDGSTDSTVE-VALKFSRKLG--DDNIRVIKLKKNR 143 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHH-HHhccCCCCceeEEEeCCCCchhHHH-HHHHHHHHcC--cceEEEeehhccC
Confidence 5899999999995 4555555543 33333 333 44466779999988 6666776653 2567777555555
Q ss_pred CCCccHHHHHhhhhcccCCcEEEEecCC--CCC-ChHHHHHHHhhhhc-CCCEEEEeeEEEEecCCCcHHHH-HHHH--h
Q 009761 164 GYKAGALKEGMKHSYVKQCDYVAIFDAD--FEP-EPDFLWRTIPFLVH-NPDIALVQARWKFVNADECLMTR-MQEM--S 236 (526)
Q Consensus 164 g~K~~aln~gl~~a~~~~~d~v~~lDaD--~~~-~pd~L~~lv~~~~~-~~~v~~V~~~~~~~~~~~~~~~~-~~~~--~ 236 (526)
| |++|...|+-.+ +|+++++.||| +.+ +-+.|++.+..... .++-+++.|...+....+....| +... .
T Consensus 144 g-KGgAvR~g~l~~---rG~~ilfadAdGaTkf~d~ekLe~al~~~~~p~~r~~va~GsrahLe~~~a~a~rs~~r~iLM 219 (323)
T KOG2977|consen 144 G-KGGAVRKGMLSS---RGQKILFADADGATKFADLEKLEKALNDKAGPGPRDDVACGSRAHLENTEAVAKRSVIRNILM 219 (323)
T ss_pred C-CCcceehhhHhc---cCceEEEEcCCCCccCCCHHHHHHHHHhhcCCCCCCceeecCHHHhhccHHHHHHhHhhHHHH
Confidence 5 999999999999 99999999999 444 45677777765532 33444555544433221222222 1111 1
Q ss_pred hhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCC-CCccchHHHHHHHHhCCCeEEEeccccccccCCcC
Q 009761 237 LDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKD-RTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPST 312 (526)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~-~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t 312 (526)
+.+|..+.-.+..+.+.. -+| +-++.|.+.+.+-.|.. ..-.-|.++-..+...+-.+...+ +-|+|.+.|
T Consensus 220 ~gFH~lv~~~a~rsI~DT--Qcg-fklftR~aa~~if~~lh~e~W~fdvEll~La~~~~ipi~ei~--v~w~EIdgS 291 (323)
T KOG2977|consen 220 YGFHKLVWIFAIRSIRDT--QCG-FKLFTRAAARRIFPWLHVERWAFDVELLYLAKRFTIPIKEIP--VEWTEIDGS 291 (323)
T ss_pred HHHHHHHHHHhcCccccc--chh-HHHhHHHHHHhhcchhheeeeeccHHHHHHHHHcCCCcEEee--eEEEEcCCc
Confidence 222222211122222221 123 67889999988865554 224568888888887776666555 446676665
No 77
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=5.4e-12 Score=129.66 Aligned_cols=211 Identities=16% Similarity=0.162 Sum_probs=145.6
Q ss_pred CCCCCcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcC-CCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC
Q 009761 87 NSAYPMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDD-STDPTIKDLVELECQRWASKGINIKYEIRDSRNG 164 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~-s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 164 (526)
.+.+|..||+|+-+||. .++-+++-|+.+.+-+.--.+|+++|| |+.+......+++.+++ ..+++++.+++.|
T Consensus 138 ~~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~----~~v~i~r~~~R~G 213 (578)
T KOG3736|consen 138 SDKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLKDKLEEYVKRF----SKVRILRTKKREG 213 (578)
T ss_pred ccccCCCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhhhhhhHHHHhhh----cceeEEeecchhh
Confidence 46689999999999999 789999999988765443334555555 55444344455555553 2377776666666
Q ss_pred CCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHH---HH--HHhhhh
Q 009761 165 YKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTR---MQ--EMSLDY 239 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~---~~--~~~~~~ 239 (526)
+..|+..|.+.| +||+++|+|+.+.....||+-+++.+.+|. ..+|+......+.+.-.... .. .+.+..
T Consensus 214 -LIrARl~GA~~A---~geVL~FLDsHcE~n~gWLePLL~~I~~~r-~tvv~PvID~Id~~tf~y~~~~~~~rGgFdW~l 288 (578)
T KOG3736|consen 214 -LIRARLLGASMA---TGEVLTFLDSHCEVNVGWLEPLLARIAEDR-KTVVCPVIDVIDDNTFEYEKQSELMRGGFDWEL 288 (578)
T ss_pred -hHHHHhhhhhhh---hchheeeeecceeEecCcchHHHHHhhhcC-ceeecceEEeecCcCceecccCccceeeeecce
Confidence 999999999999 999999999999999999999999885554 34444444433332110000 00 011111
Q ss_pred hhh----h--hhhcc-c--cCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEecccccc
Q 009761 240 HFT----V--EQEVG-S--STYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDLKVK 306 (526)
Q Consensus 240 ~~~----~--~~~~~-~--~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~~~ 306 (526)
.|. . ..... + .-.....+.|+..+++|+.+.++|++|++. .+|..|+++|+...|-++..+|-..+-
T Consensus 289 ~f~w~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~PCSrVG 367 (578)
T KOG3736|consen 289 TFKWERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVPCSRVG 367 (578)
T ss_pred eEEeccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecCcccee
Confidence 111 0 01111 1 111123367999999999999999999976 779999999999999999999977764
No 78
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=99.16 E-value=1e-09 Score=107.22 Aligned_cols=178 Identities=18% Similarity=0.179 Sum_probs=109.7
Q ss_pred EEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEE-cCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCC---C-C---
Q 009761 93 VLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVL-DDSTDPTIKDLVELECQRWASKGINIKYEIRDSR---N-G--- 164 (526)
Q Consensus 93 VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~-D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~---~-g--- 164 (526)
+.|+|.+||.++.++++|+|+++|....+...|+|. |++++++.+ .++.. +.+++++..... + +
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~-~v~~~-------~~~i~~i~~~~~~~~~~~~~~ 73 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVAD-VAKSF-------GDGVTHIQHPPISIKNVNPPH 73 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHH-HHHhh-------ccccEEEEcccccccccCccc
Confidence 568999999999999999999998522222334455 555544433 44332 123444422111 1 0
Q ss_pred ------CCcc----HHHHHhhhhcccCCcEEEEecCCCCCChH---HHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHH
Q 009761 165 ------YKAG----ALKEGMKHSYVKQCDYVAIFDADFEPEPD---FLWRTIPFLVHNPDIALVQARWKFVNADECLMTR 231 (526)
Q Consensus 165 ------~K~~----aln~gl~~a~~~~~d~v~~lDaD~~~~pd---~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~ 231 (526)
+-+. |+|.+++.. ++++++++|+|+++.|| +++++++.+++|+++.+|++... |+.......
T Consensus 74 ~~~~y~~ia~hyk~aln~vF~~~---~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~Nd--nG~~~~~~~ 148 (334)
T cd02514 74 KFQGYYRIARHYKWALTQTFNLF---GYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWND--NGKEHFVDD 148 (334)
T ss_pred ccchhhHHHHHHHHHHHHHHHhc---CCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeecc--CCcccccCC
Confidence 0122 788888877 89999999999999999 55778888889999999988642 211100000
Q ss_pred HHHHhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHH--HhCCCeEEEecc
Q 009761 232 MQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRA--SLKGWKFVYVGD 302 (526)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl--~~~G~~~~~~~~ 302 (526)
. .........++|.+-+.+|+++++.. +.-..-|+|..+|. +++|-.+ ..||
T Consensus 149 ----------~-----~~~lyrs~ff~glGWml~r~~W~e~~---~~wp~~~WD~w~R~~~~rkgr~c-irPe 202 (334)
T cd02514 149 ----------T-----PSLLYRTDFFPGLGWMLTRKLWKELE---PKWPKAFWDDWMRLPEQRKGREC-IRPE 202 (334)
T ss_pred ----------C-----cceEEEecCCCchHHHHHHHHHHHhC---CCCCCCChHHhhcchhhhcCCcc-ccCC
Confidence 0 00111112256778788899888872 22122499999886 5677444 3344
No 79
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=98.98 E-value=8.2e-09 Score=95.95 Aligned_cols=179 Identities=13% Similarity=0.172 Sum_probs=95.2
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
+|.|.|.++..++|++++.++..|+.+ +| -.|+ ..+. .+-+.+.|.|++
T Consensus 3 iI~c~n~~~~~~~~~~~i~~~~~~~~~-~i-~i~~----------------------------~~~~-~s~~~~yN~a~~ 51 (217)
T PF13712_consen 3 IIICVNDEELYEECLRSIKRLIGPPGE-LI-EIDN----------------------------VRNA-KSMAAAYNEAME 51 (217)
T ss_dssp EEEEES-HHHHHHHHHHHHHTT--TEE-EE-EEE-----------------------------SSS--S-TTTHHHHHGG
T ss_pred EEEEECCHHHHHHHHHHHHhhCCCCce-EE-EEec----------------------------cCCC-cCHHHHHHHHHH
Confidence 456677777788899999999888643 22 1222 1112 237789999999
Q ss_pred hhcccCCcEEEEecCCCCC-ChHHHHHHHhhhhcCCCEEEEe--eEEEEecCCCcHHHHHHH----Hhhhh-hh--h---
Q 009761 176 HSYVKQCDYVAIFDADFEP-EPDFLWRTIPFLVHNPDIALVQ--ARWKFVNADECLMTRMQE----MSLDY-HF--T--- 242 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~--~~~~~~~~~~~~~~~~~~----~~~~~-~~--~--- 242 (526)
.| +++|+++++.|..+ +++|+.++++.|+++|++|+++ |.... .....++..... ..+.. .. .
T Consensus 52 ~a---~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~~-~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~ 127 (217)
T PF13712_consen 52 KA---KAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKRL-PPNGVWWESPNKVGKVREYGRIMHGHGPNS 127 (217)
T ss_dssp G-----SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEESS--S-TTS---EEEEEETTEEEE----E----
T ss_pred hC---CCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCcC-CCCCcccccccccccccccccccccccccc
Confidence 99 99999999999666 7899999999998899987764 22211 111111111000 00000 00 0
Q ss_pred -----hhhhccccCCCcccccccceeeeHHHHHHcCCCCCCC----ccchHHHHHHHHhCCCeEEEeccccccccCCcCh
Q 009761 243 -----VEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT----TVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTF 313 (526)
Q Consensus 243 -----~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~----~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~ 313 (526)
...........+-.+-|..++.+|+.+ +|+++. -.-|.++++++.++|+++ ++++..+.|....++
T Consensus 128 ~~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v-~~~~~~~~H~s~g~~ 202 (217)
T PF13712_consen 128 AGEVRYGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRV-VVPPPWCIHFSGGSF 202 (217)
T ss_dssp ---------ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EE-EE-----EE-S----
T ss_pred cccccccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEE-EecCceEEEcCCCCc
Confidence 000001112223336799999999998 788873 346999999999999998 666677888777664
Q ss_pred H
Q 009761 314 K 314 (526)
Q Consensus 314 ~ 314 (526)
.
T Consensus 203 ~ 203 (217)
T PF13712_consen 203 D 203 (217)
T ss_dssp S
T ss_pred c
Confidence 4
No 80
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=98.64 E-value=3e-07 Score=83.96 Aligned_cols=177 Identities=17% Similarity=0.128 Sum_probs=111.3
Q ss_pred cEEEEEecCCChHHHHHHHHHHH----cCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 92 MVLVQIPMYNEKEVYQLSIGAAC----GLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 92 ~VsViIp~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
+|+|+||-+|.++.+...+..+. +|. -+..|+|.....+. .-.|+
T Consensus 3 ~~aiivpyr~R~~~l~~~l~~~~~~L~rq~---~~~~i~vi~Q~~~~----------------------------~FNR~ 51 (219)
T cd00899 3 KVAIIVPFRNRFEHLLIFLPHLHPFLQRQQ---LDYRIFVIEQVGNF----------------------------RFNRA 51 (219)
T ss_pred ceEEEEecCCHHHHHHHHHHHHHHHHHhcC---CcEEEEEEEecCCc----------------------------cchhh
Confidence 59999999999987777766543 232 22334444432221 11267
Q ss_pred cHHHHHhhhhcc-cCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhh
Q 009761 168 GALKEGMKHSYV-KQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQE 246 (526)
Q Consensus 168 ~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (526)
..+|.|+..|.. .+.|++++-|.|-+|..+.... .+.+.|.--.+.-. + ..+...+
T Consensus 52 ~llNvG~~~a~k~~~~dc~i~hDVDllP~~~~~~y---~~~~~p~H~s~~~~-------~--------~~~~lpy----- 108 (219)
T cd00899 52 KLLNVGFLEALKDGDWDCFIFHDVDLLPENDRNLY---GCEEGPRHLSVPLD-------K--------FHYKLPY----- 108 (219)
T ss_pred hhhhHHHHHHhhcCCccEEEEecccccccCccccc---cCCCCCeEEEEeec-------c--------cccccCc-----
Confidence 788998877743 2479999999999999887543 22233322111110 0 0001000
Q ss_pred ccccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEeccccc-----ccc-------CCc
Q 009761 247 VGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDLKV-----KNE-------LPS 311 (526)
Q Consensus 247 ~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~~-----~~~-------~p~ 311 (526)
..+.|++++++|+.+.+++||++.. ..||.|+..|+...|.++...+.... +|. .|.
T Consensus 109 --------~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~ 180 (219)
T cd00899 109 --------KTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPN 180 (219)
T ss_pred --------ccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHH
Confidence 0134889999999999999999955 67999999999999999888776554 121 111
Q ss_pred ChHHHHHHHHhhhcchHHH
Q 009761 312 TFKAYRYQQHRWSCGPANL 330 (526)
Q Consensus 312 t~~~~~~Qr~RW~~G~~~~ 330 (526)
-+.....++.||+...+..
T Consensus 181 r~~~l~~~~~~~~~dGLns 199 (219)
T cd00899 181 RFALLQNSRERDHSDGLNS 199 (219)
T ss_pred HHHHHHhhCeEeccCCccc
Confidence 2334445666676665543
No 81
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=97.97 E-value=8e-05 Score=70.13 Aligned_cols=118 Identities=21% Similarity=0.250 Sum_probs=81.5
Q ss_pred CCCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEE-EEEcCCC--chhHHHHHHHHHHHhhc------cCCcEEEE
Q 009761 87 NSAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITI-QVLDDST--DPTIKDLVELECQRWAS------KGINIKYE 157 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I-~V~D~s~--D~t~~~l~~~~~~~~~~------~~~~v~~~ 157 (526)
..+.++|-|+.|..|.+..+.+-++.+.+++||++.+.+ +++.+++ |.+.+ ..+...++... +-..+.++
T Consensus 21 ~~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~-~l~~~~~~~q~~~~~~~~F~~itIl 99 (269)
T PF03452_consen 21 ARNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLK-ILEAALKKLQSHGPESKRFRSITIL 99 (269)
T ss_pred cccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHH-HHHHHHHHHhccCcccCCcceEEEE
Confidence 356789999999999999999999999999999988866 5666666 66666 34433333211 11234443
Q ss_pred eeCC----------CCC---------CCccHHHHHhhhhcccCCcEEEEecCCCCC-ChHHHHHHHhh
Q 009761 158 IRDS----------RNG---------YKAGALKEGMKHSYVKQCDYVAIFDADFEP-EPDFLWRTIPF 205 (526)
Q Consensus 158 ~~~~----------~~g---------~K~~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~ 205 (526)
..+- |.. --+.|+|..+..+..+..+||+.+|+|.+- +|+.+++++.+
T Consensus 100 ~~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dli~~ 167 (269)
T PF03452_consen 100 RKDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDLIAH 167 (269)
T ss_pred cCCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHHHhC
Confidence 2211 111 235567888888766788999999999665 67788887763
No 82
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=97.89 E-value=0.0011 Score=60.97 Aligned_cols=196 Identities=15% Similarity=0.113 Sum_probs=106.1
Q ss_pred CcEEEEEecCCCh--H-HHHHHHH--HHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCC
Q 009761 91 PMVLVQIPMYNEK--E-VYQLSIG--AACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGY 165 (526)
Q Consensus 91 P~VsViIp~yne~--~-~l~~~L~--sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 165 (526)
|+.+++||+--.+ + .-.+.+. +++.---+.+-..|+++|+++- .+..++.+ -.+..++.|+.-..++.+
T Consensus 2 ~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~--~d~~i~~~----i~~~~~~~yl~~~s~~~F 75 (346)
T COG4092 2 QPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEV--MDRLIRSY----IDPMPRVLYLDFGSPEPF 75 (346)
T ss_pred CCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchh--HHHHHHHH----hccccceEEEecCCCccc
Confidence 4577888876554 2 2223333 2222222344466778888652 22233333 234577778765444332
Q ss_pred --CccHHHHHhhhhcc-cCCcEEEEecCCCCCChHHHHHHHhhhh---cCCCE-EEEeeEEEEecCCCcHHH-HHHHHhh
Q 009761 166 --KAGALKEGMKHSYV-KQCDYVAIFDADFEPEPDFLWRTIPFLV---HNPDI-ALVQARWKFVNADECLMT-RMQEMSL 237 (526)
Q Consensus 166 --K~~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~lv~~~~---~~~~v-~~V~~~~~~~~~~~~~~~-~~~~~~~ 237 (526)
.+...|.|...+.. -++++|+++|+|+..+.|-..+++.... -..++ +...-|+.+.|...+..- .......
T Consensus 76 ~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~~~v~f~~~d~f~ 155 (346)
T COG4092 76 ASETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNKADTQVFFDVEDMFL 155 (346)
T ss_pred cchhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeeecchhhhhHHHHHHHHhh
Confidence 24456777766632 2589999999999999776666653211 11233 334456667776433211 1111111
Q ss_pred hhhhh--hhhhccccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHh
Q 009761 238 DYHFT--VEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASL 292 (526)
Q Consensus 238 ~~~~~--~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~ 292 (526)
+.... .....+....-+.....+..++.|+.+...||++|.. ..||.|+-.|+..
T Consensus 156 d~~i~es~~~~~~~~~~ff~~~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l 215 (346)
T COG4092 156 DAMIFESPLAEFRKEDNFFIAPYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGL 215 (346)
T ss_pred hhHhhhhHHHHhCcccccccccccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHH
Confidence 11100 0001111112222233556889999999999999954 7799999988854
No 83
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=97.89 E-value=0.00017 Score=72.66 Aligned_cols=204 Identities=17% Similarity=0.205 Sum_probs=97.4
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC------
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS------ 161 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~------ 161 (526)
...|.+.|+|-+||.++.+++||+++++..-..++.-|+|..|++++...+.++.+ +..+.++....
T Consensus 90 ~~~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~~y-------~~~v~~i~~~~~~~i~~ 162 (434)
T PF03071_consen 90 NKEPVIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIKSY-------GDQVTYIQHPDFSPITI 162 (434)
T ss_dssp -------EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHHGG-------GGGSEEEE-S--S----
T ss_pred cCCCcceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHHHh-------hhhheeeecCCcCCcee
Confidence 34577899999999999999999999986522345556688777666555455433 12344443221
Q ss_pred CCCC-Cc-----cH--HHHHhhhhcc-cCCcEEEEecCCCCCChHHHHHH---HhhhhcCCCEEEEeeEEEEecCCCcHH
Q 009761 162 RNGY-KA-----GA--LKEGMKHSYV-KQCDYVAIFDADFEPEPDFLWRT---IPFLVHNPDIALVQARWKFVNADECLM 229 (526)
Q Consensus 162 ~~g~-K~-----~a--ln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~l---v~~~~~~~~v~~V~~~~~~~~~~~~~~ 229 (526)
+.+. |. -| ...|+.+... .+++.++++.+|..+.||+++-+ .+.+++||.+-+|++--. |+.....
T Consensus 163 ~~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSawNd--nG~~~~~ 240 (434)
T PF03071_consen 163 PPKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAWND--NGKEHFV 240 (434)
T ss_dssp -TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES--T--T-BGGGS
T ss_pred CcccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEcccc--CCccccc
Confidence 1111 10 01 1122333221 26889999999999999988654 566778999998876421 1111100
Q ss_pred HHHHHHhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCC-CCCCCccchHHHHHH--HHhCCCeEEEecccc-c
Q 009761 230 TRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGG-WKDRTTVEDMDLAVR--ASLKGWKFVYVGDLK-V 305 (526)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg-~~~~~~~ED~~l~~r--l~~~G~~~~~~~~~~-~ 305 (526)
. ..........-.++|-+-|.+|+.++++.. |+.. . +|-.+| ..++|-.++. |+.- .
T Consensus 241 ~--------------~~~~~~lyRsdffpglGWml~r~~w~el~~~Wp~~-~---WDdwmR~~~~rkgR~cIr-PeisRt 301 (434)
T PF03071_consen 241 D--------------DSRPSLLYRSDFFPGLGWMLTRELWDELEPKWPKA-F---WDDWMRQPEQRKGRQCIR-PEISRT 301 (434)
T ss_dssp ---------------TT-TT-EEEESS---SSEEEEHHHHHHHGGG--SS-----HHHHHTSHHHHTT-EEEE-ESSBSE
T ss_pred c--------------CCCccceEecccCCchHHHhhHHHHHhhcccCCCC-C---chhhhcCccccCCCceee-ccCCCc
Confidence 0 000011111222678899999999998753 5543 2 444444 5678866655 5432 2
Q ss_pred --cccCCcChHHHHHH
Q 009761 306 --KNELPSTFKAYRYQ 319 (526)
Q Consensus 306 --~~~~p~t~~~~~~Q 319 (526)
.++...+...++.+
T Consensus 302 ~~fg~~G~s~g~~f~~ 317 (434)
T PF03071_consen 302 YHFGKKGVSNGQFFDK 317 (434)
T ss_dssp EE--SSSSS-THHHHH
T ss_pred cccCcCCcchHHHHHH
Confidence 23444454444433
No 84
>KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism]
Probab=97.59 E-value=0.0015 Score=62.89 Aligned_cols=199 Identities=16% Similarity=0.185 Sum_probs=115.3
Q ss_pred CCCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCC
Q 009761 87 NSAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYK 166 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K 166 (526)
+-+.|.+.+++|..++.....+...+++...-.+-++.|+....|.|+.... +....++....++..+...+ .-..
T Consensus 225 ~i~~pgih~i~pl~gr~~~f~rf~q~~c~~~d~~l~l~vv~f~~se~e~ak~---e~~tslra~f~~~q~l~lng-eFSR 300 (494)
T KOG3588|consen 225 LIEDPGIHMIMPLRGRAAIFARFAQSICARGDDRLALSVVYFGYSEDEMAKR---ETITSLRASFIPVQFLGLNG-EFSR 300 (494)
T ss_pred cccCCCceEEEeccchHHHhhhhhHHHhccCCCceEEEEEEecCCChHHHhh---hHHHHHhhcCCceEEecccc-hhhh
Confidence 3456889999999999999999988888654333333332223355543331 22233333345665553332 2247
Q ss_pred ccHHHHHhhhhcccCCc-EEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEe--cC-----CCcHHHHHHHHhhh
Q 009761 167 AGALKEGMKHSYVKQCD-YVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFV--NA-----DECLMTRMQEMSLD 238 (526)
Q Consensus 167 ~~aln~gl~~a~~~~~d-~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~--~~-----~~~~~~~~~~~~~~ 238 (526)
+.|+..|.+.- +.+ .+.|+|.|.....++|.++-.- .-|+--+ .-+..+. |+ ........+..
T Consensus 301 a~aL~vGAe~~---~~nvLLFfcDVDi~FT~efL~rcr~N--t~~gkqi-yfPivFS~ynp~ivy~~~~~~p~e~~~--- 371 (494)
T KOG3588|consen 301 AKALMVGAETL---NANVLLFFCDVDIYFTTEFLNRCRLN--TILGKQI-YFPIVFSQYNPEIVYEQDKPLPAEQQL--- 371 (494)
T ss_pred hHHHHhhHHHh---ccceeEEEeccceeehHHHHHHHhhc--cCCCceE-EEEEEEeecCcceeecCCCCCchhHhe---
Confidence 77889998887 555 4667899999999999987432 1232211 1122111 11 01111111111
Q ss_pred hhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEeccccc
Q 009761 239 YHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDLKV 305 (526)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~~ 305 (526)
...+. .++..-+++ |-.+.+|.+ +..+||||.+. ..||.++-.+..+.|.+++-.|+.-.
T Consensus 372 ---~~~~~--tGfwRdfGf-Gmtc~yrsd-~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl 434 (494)
T KOG3588|consen 372 ---VIKKD--TGFWRDFGF-GMTCQYRSD-FLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGL 434 (494)
T ss_pred ---eeccc--cccccccCC-ceeEEeecc-ceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCce
Confidence 11111 111111111 545556555 56789999743 77999999999999999998887654
No 85
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=97.36 E-value=0.0051 Score=64.69 Aligned_cols=202 Identities=18% Similarity=0.169 Sum_probs=110.9
Q ss_pred CCcEEEEEecCCC-hHHHHHHHHHHHcCC-CCCCce-EEEEEcCC-Cch-h---HHHHHHHHHHHhhccCCcEEEEeeCC
Q 009761 90 YPMVLVQIPMYNE-KEVYQLSIGAACGLS-WPSDRI-TIQVLDDS-TDP-T---IKDLVELECQRWASKGINIKYEIRDS 161 (526)
Q Consensus 90 ~P~VsViIp~yne-~~~l~~~L~sl~~q~-yp~~~~-~I~V~D~s-~D~-t---~~~l~~~~~~~~~~~~~~v~~~~~~~ 161 (526)
..+|.||||+.+. .+.+.+-++...+.- -++++. .++|...+ .|. . +...++++.+++ ...++.++....
T Consensus 246 ~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~--~~~~i~~i~~~~ 323 (499)
T PF05679_consen 246 STRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTVVLFYDPSDSDSISQIKELLEELERKY--PFSRIKWISVKT 323 (499)
T ss_pred CCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEEEEecCcccchhHHHHHHHHHHHHHhC--CccceEEEEecC
Confidence 4789999999999 566666665544320 012222 23344332 222 1 223455555554 356777876663
Q ss_pred CCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEe--cCCCcHHHHHHHHhhhh
Q 009761 162 RNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFV--NADECLMTRMQEMSLDY 239 (526)
Q Consensus 162 ~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~--~~~~~~~~~~~~~~~~~ 239 (526)
..-.++.++..|++.. +..++++++|.|..+++|+|.++-..-..+.+ |..|..+. |++.. ..... ....
T Consensus 324 ~~fsr~~~Ld~g~~~~--~~d~L~f~~Dvd~~f~~~fL~rcR~nti~g~q---vy~PI~Fs~y~p~~~-~~~~~--~~~~ 395 (499)
T PF05679_consen 324 GEFSRGAALDVGAKKF--PPDSLLFFCDVDMVFTSDFLNRCRMNTIPGKQ---VYFPIVFSQYNPDIV-YAGKP--PEPD 395 (499)
T ss_pred CCccHHHHHHhhcccC--CCCcEEEEEeCCcccCHHHHHHHHHhhhcCcE---EEEeeeccccCCccc-ccCCC--Cccc
Confidence 4445888999999865 36789999999999999999998543212221 22232221 22110 00000 0000
Q ss_pred hhhhhhhccccCCCcccccccceeeeHHHHHHc--CCCCCC---CccchHHHHHHHHhCC--CeEEEeccccc
Q 009761 240 HFTVEQEVGSSTYAFFGFNGTAGVWRISALNEA--GGWKDR---TTVEDMDLAVRASLKG--WKFVYVGDLKV 305 (526)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~--gg~~~~---~~~ED~~l~~rl~~~G--~~~~~~~~~~~ 305 (526)
.+.+....| ..... --|-.++++.+ +.++ ||++.. -..||.++--+..+.| .++.-.++.-.
T Consensus 396 ~~~i~~~~G--~w~~~-gfg~~~~YksD-y~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep~L 464 (499)
T PF05679_consen 396 QFDISKDTG--FWRRF-GFGMVCFYKSD-YMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEPGL 464 (499)
T ss_pred cCccCCCCC--ccccC-CCceEEEEhhh-hhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCCCe
Confidence 001111111 11110 01545555555 5555 667663 3789999999999999 77776666543
No 86
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=97.31 E-value=0.0015 Score=63.09 Aligned_cols=125 Identities=18% Similarity=0.241 Sum_probs=65.9
Q ss_pred CcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCc--hhHH---HHHHHHHHHhhccCCcEEEEeeCC---
Q 009761 91 PMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDDSTD--PTIK---DLVELECQRWASKGINIKYEIRDS--- 161 (526)
Q Consensus 91 P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D--~t~~---~l~~~~~~~~~~~~~~v~~~~~~~--- 161 (526)
-+.+|+|||.||+ ..++..|.++ |.+..+|+|++.+.. +... ++++..|.. .+.++.++|..+
T Consensus 50 ~~maIVVP~KnE~l~lleGVL~gI-----Ph~C~IIvVSNS~r~~~d~f~~E~d~l~~f~~~---t~r~~~~vHQkDp~l 121 (381)
T PF09488_consen 50 SKMAIVVPCKNEKLKLLEGVLSGI-----PHDCLIIVVSNSSREPVDRFKMEVDLLKHFCRL---TRRQIIIVHQKDPGL 121 (381)
T ss_dssp TTEEEEEEESS--HHHHHHHHHCS------TTSEEEEEE---CSSSCHHHHHHHHHHHHHHH---CT--EEEEETT-HHH
T ss_pred hCcEEEEECCCCchhhhhhhhhcC-----CCCCeEEEEECCCCCCccHHHHHHHHHHHHHHh---hcCceEEEecCCHHH
Confidence 4689999999999 6777777654 777777756555441 2222 133444433 123444444311
Q ss_pred ------------------CCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChH---HHHHHHhhh-hcCCCEEEEeeEE
Q 009761 162 ------------------RNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPD---FLWRTIPFL-VHNPDIALVQARW 219 (526)
Q Consensus 162 ------------------~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd---~L~~lv~~~-~~~~~v~~V~~~~ 219 (526)
-+.||+..+-.|+-.|.....+||-|+|||...+-. +.+....-| .......+|--.|
T Consensus 122 A~Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyiPGaV~EYvk~yAAGf~ms~spytMVRi~W 201 (381)
T PF09488_consen 122 AEAFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYIPGAVNEYVKDYAAGFAMSESPYTMVRIHW 201 (381)
T ss_dssp HHHHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS-HHHHHHHHHHHHHHHHC-SSSCEEEEEE-
T ss_pred HHHHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCCcchHHHHHHHHHhhhcccCCCceEEEEEe
Confidence 122599999999877755688999999999877643 333333322 2455677888888
Q ss_pred EEec
Q 009761 220 KFVN 223 (526)
Q Consensus 220 ~~~~ 223 (526)
++..
T Consensus 202 ~~KP 205 (381)
T PF09488_consen 202 RSKP 205 (381)
T ss_dssp ----
T ss_pred cCCC
Confidence 7654
No 87
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=97.22 E-value=0.0026 Score=61.44 Aligned_cols=191 Identities=13% Similarity=0.127 Sum_probs=98.5
Q ss_pred CcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCc--hhHH---HHHHHHHHHhhccCCcEEEEeeCC---
Q 009761 91 PMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDDSTD--PTIK---DLVELECQRWASKGINIKYEIRDS--- 161 (526)
Q Consensus 91 P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D--~t~~---~l~~~~~~~~~~~~~~v~~~~~~~--- 161 (526)
-+.+|+|||.||+ ..++..|.++ |.+..+|+|++...+ +..+ ++++..|+. ...++..+|..+
T Consensus 51 ~~mAIVVP~KdE~l~lleGVL~gI-----Ph~c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~---t~r~~i~vHQkDp~l 122 (393)
T PRK14503 51 GRMAIVVPVKNERLKLLEGVLKGI-----PHECPIIVVSNSKREPPDRFKLEVDLVRHFYRL---TQRPIIIVHQKDPGL 122 (393)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEEEEeCCCCCCchHHHHHHHHHHHHHhh---hcCceEEEEcCCHHH
Confidence 4689999999999 6777666654 777776645444321 1111 123333322 112233333211
Q ss_pred ------------------CCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChH---HHHHHHhhh-hcCCCEEEEeeEE
Q 009761 162 ------------------RNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPD---FLWRTIPFL-VHNPDIALVQARW 219 (526)
Q Consensus 162 ------------------~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd---~L~~lv~~~-~~~~~v~~V~~~~ 219 (526)
-+.||+.++-.|+-.|..-..+||-|+|||..++-. +.+.-..-| .......+|--.|
T Consensus 123 a~Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyiPGaV~EYvk~yAAGf~ma~spytMVRi~W 202 (393)
T PRK14503 123 AEALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYIPGAVNEYVKIYAAGFLMAESPYTMVRIHW 202 (393)
T ss_pred HHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCCCchHHHHHHHHHhhhcccCCCCceEEEEe
Confidence 122599999998877654578999999999877643 333333322 1222344555555
Q ss_pred EEecC---------CCcHHHHHHHHhhhhhhhhhhhccccCCCcccccc--cceeeeHHHHHHcCCCCCCCccchHHHHH
Q 009761 220 KFVNA---------DECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNG--TAGVWRISALNEAGGWKDRTTVEDMDLAV 288 (526)
Q Consensus 220 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~ 288 (526)
++... .....+...+-.++..+. .. .+......-+| .=.+.+++.++.+ .|..+...|=+.+..
T Consensus 203 ~~KPKv~~~~lyF~k~GRvSel~nr~LN~l~~-~~---~gf~t~li~TGNAGEhAmt~~La~~l-~f~tGY~VEp~~lvd 277 (393)
T PRK14503 203 RYKPKVTEDRLYFRKWGRVSEITNRYLNQLIS-EY---TGFETDIIKTGNAGEHAMTMKLAEIM-PFSTGYSIEPYEIVY 277 (393)
T ss_pred cCCCceecCeEEEecCcchhHHHHHHHHHHHh-hh---ccccccceecCCchhhHhhHHHHHhC-CCCCCccccHHHHHH
Confidence 43211 011122221111111111 10 11111111222 2357888888887 566666667777766
Q ss_pred HHHhCC
Q 009761 289 RASLKG 294 (526)
Q Consensus 289 rl~~~G 294 (526)
.+-+.|
T Consensus 278 lle~~G 283 (393)
T PRK14503 278 LLEEYG 283 (393)
T ss_pred HHHHhC
Confidence 666554
No 88
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=97.21 E-value=0.0028 Score=60.85 Aligned_cols=191 Identities=15% Similarity=0.150 Sum_probs=100.2
Q ss_pred CcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCch--hHH---HHHHHHHHHhhccCCcEEEEeeCC---
Q 009761 91 PMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDDSTDP--TIK---DLVELECQRWASKGINIKYEIRDS--- 161 (526)
Q Consensus 91 P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~--t~~---~l~~~~~~~~~~~~~~v~~~~~~~--- 161 (526)
-+.+|+|||.||+ ..++..|.++ |.+..+|+|++.+.++ ..+ ++++..|+. .+.++..+|..+
T Consensus 50 ~~maIVVP~KdE~l~lleGVL~gI-----Ph~c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~---t~r~~i~vHQkDp~l 121 (381)
T TIGR02460 50 GKTAIVVPVKNEKLHLLEGVLSGI-----PHECPIIIVSNSKREPPDRFKMEVDLIRHFSNL---THRKIIIIHQKDPAL 121 (381)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEEEEeCCCCCChhHHHHHHHHHHHHHHh---hcCceEEEEcCCHHH
Confidence 4689999999999 6676666554 7777766455443321 111 123333322 122333333211
Q ss_pred ------------------CCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChH---HHHHHHhhhh-cCCCEEEEeeEE
Q 009761 162 ------------------RNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPD---FLWRTIPFLV-HNPDIALVQARW 219 (526)
Q Consensus 162 ------------------~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd---~L~~lv~~~~-~~~~v~~V~~~~ 219 (526)
-+.||+.++-.|+-.|..-..+||-|+|||..++-. +.+.-..-|. ......+|--.|
T Consensus 122 a~Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyiPGaV~EYvk~yAaGf~ma~spy~MVRi~W 201 (381)
T TIGR02460 122 AEAFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYFPGAVNEYVKIYAAGFLMATSPYSMVRIHW 201 (381)
T ss_pred HHHHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCCCchHHHHHHHHHhhhcccCCCCeeEEEEe
Confidence 122599999998877654578999999999877643 3333333221 222345555555
Q ss_pred EEecC---------CCcHHHHHHHHhhhhhhhhhhhccccCCCcccc--cccceeeeHHHHHHcCCCCCCCccchHHHHH
Q 009761 220 KFVNA---------DECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGF--NGTAGVWRISALNEAGGWKDRTTVEDMDLAV 288 (526)
Q Consensus 220 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~ 288 (526)
++... .....+...+-.++..+. .. .+......- ++.=.+.+++.++.+ .|..+...|=+.+..
T Consensus 202 ~~KPKv~~~~lyF~~~GRVSElvnr~LN~l~~-~~---~gfet~ii~TGnAGEhAmt~~La~~l-~f~tGYaVEp~~lvd 276 (381)
T TIGR02460 202 RYKPKLTKGTLYFRKWGRVSEITNHYLNLLIS-EH---TGFETDIIKTGNAGEHALTMKLAEIL-PFSSGYSVEPYELVY 276 (381)
T ss_pred cCCCceecCeEEEcCCCchhHHHHHHHHHHHH-hh---ccccCcceecccchhhhhhHHHHhhC-CCCCCccccHHHHHH
Confidence 43211 011122222111111111 10 011111111 223468889988887 676666777777777
Q ss_pred HHHhCC
Q 009761 289 RASLKG 294 (526)
Q Consensus 289 rl~~~G 294 (526)
.+-+.|
T Consensus 277 lle~~G 282 (381)
T TIGR02460 277 ILERFG 282 (381)
T ss_pred HHHHhc
Confidence 776665
No 89
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=97.10 E-value=0.0015 Score=52.28 Aligned_cols=81 Identities=17% Similarity=0.044 Sum_probs=50.7
Q ss_pred CCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC---CCccHHHHHhhh
Q 009761 100 YNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNG---YKAGALKEGMKH 176 (526)
Q Consensus 100 yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g---~K~~aln~gl~~ 176 (526)
+||+..|.+.|+...++.+. ++ ++++|+|+|+|.+ +++.. .++.++....+.. .....++...+.
T Consensus 1 rne~~~L~~wl~~~~~lG~d--~i-~i~d~~s~D~t~~-~l~~~--------~~v~i~~~~~~~~~~~~~~~~~~~~~~~ 68 (97)
T PF13704_consen 1 RNEADYLPEWLAHHLALGVD--HI-YIYDDGSTDGTRE-ILRAL--------PGVGIIRWVDPYRDERRQRAWRNALIER 68 (97)
T ss_pred CChHHHHHHHHHHHHHcCCC--EE-EEEECCCCccHHH-HHHhC--------CCcEEEEeCCCccchHHHHHHHHHHHHh
Confidence 69999999999999887653 34 3377889999977 44432 2233443332221 112233343333
Q ss_pred hcccCCcEEEEecCCCCC
Q 009761 177 SYVKQCDYVAIFDADFEP 194 (526)
Q Consensus 177 a~~~~~d~v~~lDaD~~~ 194 (526)
. .++|+++++|+|-.+
T Consensus 69 ~--~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 69 A--FDADWVLFLDADEFL 84 (97)
T ss_pred C--CCCCEEEEEeeeEEE
Confidence 2 378999999999555
No 90
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=97.07 E-value=0.00071 Score=51.53 Aligned_cols=49 Identities=27% Similarity=0.202 Sum_probs=35.3
Q ss_pred ccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEeccccc
Q 009761 257 FNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDLKV 305 (526)
Q Consensus 257 ~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~~ 305 (526)
+.|+.++++|+.++++|||++.. ..||.|+..|+...|.++...+....
T Consensus 19 ~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~~ 70 (78)
T PF02709_consen 19 FFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSIG 70 (78)
T ss_dssp ---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTTT
T ss_pred eeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCceE
Confidence 56889999999999999999965 56999999999999999877665443
No 91
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=96.86 E-value=0.0036 Score=59.93 Aligned_cols=178 Identities=18% Similarity=0.168 Sum_probs=102.7
Q ss_pred cEEEEEecCCChHHHHHHHHHHH----cCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCC-CCCC
Q 009761 92 MVLVQIPMYNEKEVYQLSIGAAC----GLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSR-NGYK 166 (526)
Q Consensus 92 ~VsViIp~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~-~g~K 166 (526)
+|+||||-+|.++.+...|..+. +|.- .-++.++...++ .-.+
T Consensus 152 kvAIIIPfR~Re~HL~~~l~~LhP~LqrQrL--------------------------------~y~iyVieQ~g~~~FNR 199 (372)
T KOG3916|consen 152 KVAIIIPFRNREEHLRYLLHHLHPFLQRQRL--------------------------------DYRIYVIEQAGNKPFNR 199 (372)
T ss_pred eeEEEeecccHHHHHHHHHHHhhHHHHhhhh--------------------------------ceeEEEEEecCCCcccH
Confidence 68899999988887777666542 1211 112222222211 1125
Q ss_pred ccHHHHHhhhhcc-cCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhh
Q 009761 167 AGALKEGMKHSYV-KQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQ 245 (526)
Q Consensus 167 ~~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (526)
+.=+|.|+..|.. ...|.++|-|.|.+|..|- .+...- +.| ..+...+....|. ..
T Consensus 200 akL~NVGf~eAlkd~~wdCfIFHDVDllPenDr--NlY~C~-~~P---------------RH~sva~dk~gy~----LP- 256 (372)
T KOG3916|consen 200 AKLLNVGFLEALKDYGWDCFIFHDVDLLPENDR--NLYGCP-EQP---------------RHMSVALDKFGYR----LP- 256 (372)
T ss_pred HHhhhhHHHHHHHhcCCCEEEEecccccccCCC--CccCCC-CCC---------------cchhhhhhhcccc----cc-
Confidence 6667888887754 4678899999999987651 111100 011 1111121111111 00
Q ss_pred hccccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEeccccc-c----c------cCCc
Q 009761 246 EVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDLKV-K----N------ELPS 311 (526)
Q Consensus 246 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~~-~----~------~~p~ 311 (526)
... +-|.-.+..++-++++.||+... .+||-|+..|+...|+++---+.... + | .-|.
T Consensus 257 -----Y~~---~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~~igrYkMikH~~k~n~~n~~ 328 (372)
T KOG3916|consen 257 -----YKE---YFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPPPEIGRYKMIKHHDKGNEPNPG 328 (372)
T ss_pred -----chh---hhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeecCCCccceeEEeecccccCCCChH
Confidence 011 23778899999999999998855 78999999999999998753332221 1 1 1122
Q ss_pred ChHHHHHHHHhhhcchHHHHH
Q 009761 312 TFKAYRYQQHRWSCGPANLFK 332 (526)
Q Consensus 312 t~~~~~~Qr~RW~~G~~~~~~ 332 (526)
.++-..+-..||.+-.+..++
T Consensus 329 Ry~lL~~tk~r~~~DGLnsl~ 349 (372)
T KOG3916|consen 329 RYKLLRNTKERQTQDGLNSLK 349 (372)
T ss_pred HHHHHHhhhhhhhhcccccee
Confidence 344455556778777665543
No 92
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.42 E-value=0.03 Score=59.81 Aligned_cols=99 Identities=19% Similarity=0.253 Sum_probs=60.8
Q ss_pred CcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCc--hhHH---HHHHHHHHHhhccCCcEEEEeeCC---
Q 009761 91 PMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDDSTD--PTIK---DLVELECQRWASKGINIKYEIRDS--- 161 (526)
Q Consensus 91 P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D--~t~~---~l~~~~~~~~~~~~~~v~~~~~~~--- 161 (526)
-+.+|+|||.||+ ..++..|.++ |++..+|+|++.+.+ +..+ ++++..|+.- ..++..+|..+
T Consensus 55 ~~~aivvp~k~e~~~~~~gvl~~i-----p~~c~ii~vsns~r~~~d~~~~e~~~~~~~~~~~---~~~~~~vhq~dp~~ 126 (694)
T PRK14502 55 KKMAIVLPIKDEDLKVFEGVLSGI-----PHDCLMIVISNSSKQEVDNFKNEKDIVNRFCRIT---HRQAIVVHQKNPEL 126 (694)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEEEEeCCCCCchHHHHHHHHHHHHHHHhh---cCceEEEEcCCHHH
Confidence 4689999999999 6777666654 777776644444321 1122 1223333221 12233333211
Q ss_pred ------------------CCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChH
Q 009761 162 ------------------RNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPD 197 (526)
Q Consensus 162 ------------------~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd 197 (526)
-+.||+.++-.|+-.|.....+||-|+|||..++-.
T Consensus 127 a~a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~pg~ 180 (694)
T PRK14502 127 ANAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYIPGA 180 (694)
T ss_pred HHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCCCch
Confidence 122599999999887755678999999999887654
No 93
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=96.27 E-value=0.034 Score=52.13 Aligned_cols=94 Identities=14% Similarity=0.075 Sum_probs=61.8
Q ss_pred HHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccCCcEE
Q 009761 106 YQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQCDYV 185 (526)
Q Consensus 106 l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d~v 185 (526)
-.-||.|+.+|+-|+...+|++.++..++-.+ -++++++.+ ++++++..+. +....++...++.+.....+++
T Consensus 44 e~~~LpSl~~QTd~dF~~lv~~~~~~P~~~~~-rL~~l~~~~----p~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 116 (234)
T PF11316_consen 44 ETYCLPSLRAQTDQDFTWLVLFDDDLPEPYRE-RLRDLLADY----PQFRIVFRPP--GPHRDAMRRAINAARRDGADPV 116 (234)
T ss_pred HHHHhhHHHhccCCCeEEEEEECCCCCHHHHH-HHHHHhccC----CCcEEEecCC--chHHHHHHHHHhhhccCCCCEE
Confidence 44688999999999877766444555544333 445554443 3455553333 3355677777655433466766
Q ss_pred EE--ecCCCCCChHHHHHHHhhh
Q 009761 186 AI--FDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 186 ~~--lDaD~~~~pd~L~~lv~~~ 206 (526)
+. +|+|+-++.|+++++-...
T Consensus 117 ~~~RLDdDDAl~~dFV~rlr~~a 139 (234)
T PF11316_consen 117 LQFRLDDDDALHRDFVARLRRAA 139 (234)
T ss_pred EEEEECCcchhhHHHHHHHHHHH
Confidence 65 4999999999999998876
No 94
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=95.76 E-value=0.19 Score=48.64 Aligned_cols=177 Identities=18% Similarity=0.130 Sum_probs=104.9
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhc----cCC--cEEEEeeC-C
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWAS----KGI--NIKYEIRD-S 161 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~----~~~--~v~~~~~~-~ 161 (526)
..|.+.|++=++|.++.++++++.++.+.-..+++-|+|.-|++++.+...++.+...... .+. .+.+-.+. +
T Consensus 65 ~~~v~pvvVf~csR~~~lr~~v~kll~yrPsaekfpiiVSQD~~~e~vk~~~~~~g~~v~~i~~~~h~~~ei~v~~~~~k 144 (411)
T KOG1413|consen 65 WPPVIPVVVFACSRADALRRHVKKLLEYRPSAEKFPIIVSQDCEKEAVKKKLLSYGSDVSHIQHPMHLKDEISVPPRHKK 144 (411)
T ss_pred CCCceeEEEEecCcHHHHHHHHHHHHHhCcchhhcCEEEeccCCcHHHHHHHHHhccchhhhcCccccccccccCCcccc
Confidence 3466899999999999999999999988733345667788887777666555544222100 011 11111111 1
Q ss_pred CCCCCcc------HHHHHhhhhcccCCcEEEEecCCCCCChHHHHHH---HhhhhcCCCEEEEeeEEEEecCCCcHHHHH
Q 009761 162 RNGYKAG------ALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRT---IPFLVHNPDIALVQARWKFVNADECLMTRM 232 (526)
Q Consensus 162 ~~g~K~~------aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l---v~~~~~~~~v~~V~~~~~~~~~~~~~~~~~ 232 (526)
.++.+.- |+|..+..- +.+.++++.+|--..|||.+.. ...++.||.+=+|+.-- .|+.+..+...
T Consensus 145 ~~~Yy~IarHYkwAL~q~F~~~---~~s~vii~eDDl~iapDFF~YF~~t~~llk~D~siwcvsaWN--DNGk~~~Id~~ 219 (411)
T KOG1413|consen 145 FNAYYKIARHYKWALNQLFIVF---RESRVIITEDDLNIAPDFFSYFRNTIILLKGDPSIWCVSAWN--DNGKKQTIDST 219 (411)
T ss_pred cchhHHHHHHHHHHHhhHHhhc---CCceeEEecchhhhhhHHHHHHHHHHHHHhcCCceEEeeeec--cCCCccccccc
Confidence 1222222 344445444 7899999999999999987665 34566788877775432 23322211110
Q ss_pred HHHhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCC-CCCCCccchHH
Q 009761 233 QEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGG-WKDRTTVEDMD 285 (526)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg-~~~~~~~ED~~ 285 (526)
+ .+.....-.++|-+-|+.++.++|... |+. ...||+.
T Consensus 220 ~--------------~~~lYRtDFFpGLGWml~~~~W~ELsp~wP~-~fWDDWm 258 (411)
T KOG1413|consen 220 R--------------PSLLYRTDFFPGLGWMLTKKLWEELSPKWPV-AFWDDWM 258 (411)
T ss_pred c--------------cchhhhccccccchHHHHHHHHHhhCCCCcc-cchhhhh
Confidence 0 111111223678899999999999754 443 3555653
No 95
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=95.36 E-value=0.047 Score=52.13 Aligned_cols=103 Identities=18% Similarity=0.136 Sum_probs=69.3
Q ss_pred cEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEee--CCCC----CC
Q 009761 92 MVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIR--DSRN----GY 165 (526)
Q Consensus 92 ~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~--~~~~----g~ 165 (526)
.++-.|=+.||...++++|+|++.. -...|+.-+||+|+|.+ ++.+.|+++|+. .++.|-.. ..+. ..
T Consensus 88 ~~~~~iRvKnE~~tl~~si~S~Lpa----i~~gVI~yNdc~D~t~E-iil~fckkyP~f-ip~~Ypy~v~~~n~~~~~n~ 161 (347)
T PF06306_consen 88 NPWAFIRVKNEAMTLAESIESILPA----IDEGVIGYNDCTDGTEE-IILEFCKKYPSF-IPIKYPYEVIIKNPKSEENS 161 (347)
T ss_pred CcceEEEEcchhhhHHHHHHHHHHH----HhccEEEeecCCCCHHH-HHHHHHHhCccc-ccccCcchhhccCCchhhhh
Confidence 4678899999999999999999842 22345577889999966 788899998652 23322110 0011 11
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHH
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRT 202 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l 202 (526)
...=-|+++... ++++|++=+|+|.+..++-|-+.
T Consensus 162 l~~YYNy~ls~i--pk~~w~iKID~DhIy~~~KL~ks 196 (347)
T PF06306_consen 162 LYNYYNYVLSFI--PKNEWAIKIDADHIYDTKKLYKS 196 (347)
T ss_pred hhhhhhhhhccc--ccceEEEEeccceeecHHHHhhh
Confidence 222234555443 47899999999999999876443
No 96
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=94.61 E-value=0.55 Score=40.92 Aligned_cols=43 Identities=14% Similarity=0.175 Sum_probs=31.9
Q ss_pred CCCCCCccHHHHH----hhhhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 161 SRNGYKAGALKEG----MKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 161 ~~~g~K~~aln~g----l~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
+.+.+|-...... .+.. +.++++++|+.+.|.++.|.++.+.|
T Consensus 117 e~N~kKinSHrWfFnaf~~~l---~P~vcvllDvGT~P~~~siy~Lwkaf 163 (163)
T PF01644_consen 117 EKNAKKINSHRWFFNAFCRQL---QPNVCVLLDVGTKPGKDSIYHLWKAF 163 (163)
T ss_pred cccccccchhhHHHHHHHhhc---CCcEEEEEecCCCcCchHHHHHHhhC
Confidence 3344466654433 3444 89999999999999999999987754
No 97
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=94.51 E-value=0.31 Score=44.47 Aligned_cols=179 Identities=17% Similarity=0.106 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCC--chhHHHHHHHHHHHhhccCCcEEEEeeCCCCC---CCc-cHHHHHhhhh
Q 009761 104 EVYQLSIGAACGLSWPSDRITIQVLDDST--DPTIKDLVELECQRWASKGINIKYEIRDSRNG---YKA-GALKEGMKHS 177 (526)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V~D~s~--D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g---~K~-~aln~gl~~a 177 (526)
+.|++|-.+-..+.-.+- ..++|+..+. |+..+..+++..+++ .++......+.-. .|. .+++.+.+..
T Consensus 4 ~~IR~TW~~~~~~~~~~~-~~~FvvG~~~~~~~~~~~~l~~E~~~y----~Dil~~d~~D~y~nlt~K~~~~~~w~~~~c 78 (195)
T PF01762_consen 4 QAIRETWGNQRNFKGVRV-KVVFVVGESPNSDSDLQEALQEEAEKY----GDILQGDFVDSYRNLTLKTLAGLKWASKHC 78 (195)
T ss_pred HHHHHHHhcccccCCCcE-EEEEEEecCCCCcHHHHHHhhhhhhhc----CceEeeecccccchhhHHHHHHHHHHHhhC
Confidence 456666655443322222 2455655444 555554444333333 3444443222111 122 2344444554
Q ss_pred cccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecC-CCcHHHHHHHHhhhhhhhhhhhccccCCCccc
Q 009761 178 YVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNA-DECLMTRMQEMSLDYHFTVEQEVGSSTYAFFG 256 (526)
Q Consensus 178 ~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (526)
++.+|++.+|+|..+.++-|.+.+.....++.-..+.|....... ......+. +... ........+..
T Consensus 79 --~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw--------~v~~-~~y~~~~yP~y 147 (195)
T PF01762_consen 79 --PNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKW--------YVSE-EEYPDDYYPPY 147 (195)
T ss_pred --CchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccccccCc--------eeee-eecccccCCCc
Confidence 358999999999999998887776654122222222222211100 00000010 0000 00011112333
Q ss_pred ccccceeeeHHHHHHcCCC---CCCCccchHHHHHHHHhCCCeEE
Q 009761 257 FNGTAGVWRISALNEAGGW---KDRTTVEDMDLAVRASLKGWKFV 298 (526)
Q Consensus 257 ~~G~~~~~Rr~~l~~~gg~---~~~~~~ED~~l~~rl~~~G~~~~ 298 (526)
+.|.+.++++++++.+... ......||..++.-+.+.|.+-.
T Consensus 148 ~~G~~yvls~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~ 192 (195)
T PF01762_consen 148 CSGGGYVLSSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPI 192 (195)
T ss_pred CCCCeEEecHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCcc
Confidence 5799999999999876322 12336799999999999886654
No 98
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=94.45 E-value=0.32 Score=46.42 Aligned_cols=107 Identities=16% Similarity=0.126 Sum_probs=55.2
Q ss_pred CCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCccccccc
Q 009761 181 QCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGT 260 (526)
Q Consensus 181 ~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 260 (526)
+.||.+++|+|+.+..+-|.+++..+ ||+-...-|......... ...+..... ....+..+...|+
T Consensus 86 ~~~Wf~~~DDDtyv~~~~L~~~L~~~--~~~~~~yiG~~~~~~~~~-~~~~~~~~~-----------~~~~~~~f~~GGa 151 (252)
T PF02434_consen 86 DKDWFCFADDDTYVNVENLRRLLSKY--DPSEPIYIGRPSGDRPIE-IIHRFNPNK-----------SKDSGFWFATGGA 151 (252)
T ss_dssp T-SEEEEEETTEEE-HHHHHHHHTTS---TTS--EEE-EE----------------------------------EE-GGG
T ss_pred CceEEEEEeCCceecHHHHHHHHhhC--CCccCEEeeeeccCccce-eeccccccc-----------cCcCceEeeCCCe
Confidence 77999999999999999999999987 343333334332211111 000100000 0011122335589
Q ss_pred ceeeeHHHHHHcC------CCCCC----CccchHHHHHHHHh-CCCeEEEec
Q 009761 261 AGVWRISALNEAG------GWKDR----TTVEDMDLAVRASL-KGWKFVYVG 301 (526)
Q Consensus 261 ~~~~Rr~~l~~~g------g~~~~----~~~ED~~l~~rl~~-~G~~~~~~~ 301 (526)
+.+++|.+++++. .+... ...||+.++.-+.. .|.+....+
T Consensus 152 G~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~ 203 (252)
T PF02434_consen 152 GYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSP 203 (252)
T ss_dssp -EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-T
T ss_pred eHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeech
Confidence 9999999999872 22221 25799999999988 898887765
No 99
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=93.75 E-value=0.21 Score=49.68 Aligned_cols=210 Identities=14% Similarity=0.136 Sum_probs=109.2
Q ss_pred EEEEEecCCChHHHHHHHHHHHcC-CCCCCceEEEEEcC--CCchh-HH-------------------HHHHH-HHHHhh
Q 009761 93 VLVQIPMYNEKEVYQLSIGAACGL-SWPSDRITIQVLDD--STDPT-IK-------------------DLVEL-ECQRWA 148 (526)
Q Consensus 93 VsViIp~yne~~~l~~~L~sl~~q-~yp~~~~~I~V~D~--s~D~t-~~-------------------~l~~~-~~~~~~ 148 (526)
|-|.|++|..++ ...||.++.++ .+| +++.|=|++. ..|+. .. ...+. .+..++
T Consensus 2 IFvsiasyRD~~-c~~Tl~~~~~~A~~P-~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 79 (343)
T PF11397_consen 2 IFVSIASYRDPE-CAPTLKDLFARATNP-ERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSACAEWP 79 (343)
T ss_pred EEEEEeeecCch-HHHHHHHHHHhcCCC-ceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhcccccccc
Confidence 668899999975 88888888876 555 6665555543 22222 10 01110 000100
Q ss_pred -----ccCCcEEEEeeCCC-CCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcC-CCEEEEeeEEEE
Q 009761 149 -----SKGINIKYEIRDSR-NGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHN-PDIALVQARWKF 221 (526)
Q Consensus 149 -----~~~~~v~~~~~~~~-~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~-~~v~~V~~~~~~ 221 (526)
..+.+|++++.+.. ..|-.-|++.+.+.- .+-+|++.+|+.+...++|=+.++..++.- ..-++.+.....
T Consensus 80 ~~~~~~~~~~Ir~~~~~~~~a~Gp~~AR~la~~l~--~gE~y~LqiDSH~rF~~~WD~~li~~~~~~~~~~aVLS~YP~~ 157 (343)
T PF11397_consen 80 DGALCLRSDQIRVIRVDASEARGPCWARYLAQKLY--RGEDYYLQIDSHMRFVPGWDEILIEMLKSLRNPKAVLSTYPPG 157 (343)
T ss_pred cccccccCCeEEEEEeCHHHCcChHHHHHHHHHHh--CCCeEEEEEeccceeeccHHHHHHHHHHhcCCCCeEEecCCCC
Confidence 01345555544332 224666777777665 367899999999999999988888766432 223344433322
Q ss_pred ecC-C------CcHHHHHHHHhhh--hhhhhhhh-ccc--c--CCCcccccccceeee-HHHHHHcCCCCCCC----ccc
Q 009761 222 VNA-D------ECLMTRMQEMSLD--YHFTVEQE-VGS--S--TYAFFGFNGTAGVWR-ISALNEAGGWKDRT----TVE 282 (526)
Q Consensus 222 ~~~-~------~~~~~~~~~~~~~--~~~~~~~~-~~~--~--~~~~~~~~G~~~~~R-r~~l~~~gg~~~~~----~~E 282 (526)
.+. + .+....+....+. ........ ... . ......+.+++..|. -++++++ .+|+.. .+|
T Consensus 158 ~~~~~~~~~~~~~~~~~lc~~~~~~~g~~~~~~~~~~~~~~~~~P~~~~f~aaGF~Fa~~~~~~eV-P~DP~lp~lF~GE 236 (343)
T PF11397_consen 158 YEPDGGQPEPEKTTVPRLCAARFGPDGMVRLGARWIKPAPKLEEPVPQPFWAAGFSFAPGHFVREV-PYDPHLPFLFDGE 236 (343)
T ss_pred cccccCCccccCCcccEEEEeEECCCCcEeecceecccccccCCCeeeceecccEEEcchhheecC-CCCCCcccccccH
Confidence 222 0 0001110000010 00000000 000 0 001112334455444 4455555 777654 689
Q ss_pred hHHHHHHHHhCCCeEEEeccccccc
Q 009761 283 DMDLAVRASLKGWKFVYVGDLKVKN 307 (526)
Q Consensus 283 D~~l~~rl~~~G~~~~~~~~~~~~~ 307 (526)
++.++.|+.-+||.+..=+...++|
T Consensus 237 E~~~aaRlwT~GYD~Y~P~~~v~~H 261 (343)
T PF11397_consen 237 EISMAARLWTHGYDFYSPTRNVLFH 261 (343)
T ss_pred HHHHHHHHHHcCCccccCCCceeEE
Confidence 9999999999999985544555543
No 100
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=93.69 E-value=0.87 Score=40.82 Aligned_cols=93 Identities=18% Similarity=0.206 Sum_probs=57.7
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+....++.+++.+.... .++++| |.++. +.... + ... +..+.++.......|-..++..|++.+. .
T Consensus 24 ~g~~li~~~i~~l~~~~--~~~i~v-v~~~~-~~~~~---~-~~~-----~~~~~~~~~~~~~~G~~~~i~~al~~~~-~ 89 (186)
T cd04182 24 DGKPLLRHALDAALAAG--LSRVIV-VLGAE-ADAVR---A-ALA-----GLPVVVVINPDWEEGMSSSLAAGLEALP-A 89 (186)
T ss_pred CCeeHHHHHHHHHHhCC--CCcEEE-ECCCc-HHHHH---H-Hhc-----CCCeEEEeCCChhhCHHHHHHHHHHhcc-c
Confidence 45678899999887652 233333 44332 22211 1 111 2234444334333457788899998871 1
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhhh
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFLV 207 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 207 (526)
+.|+++++++|. .++++.+++++..+.
T Consensus 90 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 117 (186)
T cd04182 90 DADAVLILLADQPLVTAETLRALIDAFR 117 (186)
T ss_pred cCCEEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 279999999997 678999999998774
No 101
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=93.64 E-value=0.63 Score=41.96 Aligned_cols=99 Identities=21% Similarity=0.261 Sum_probs=60.4
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh-
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK- 175 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~- 175 (526)
+|. +....++.+++.+.+... ++++| |.++..++ ..+..++ +.++.++.......|-..++..|++
T Consensus 20 l~~-~g~pll~~~i~~l~~~~~--~~iiv-v~~~~~~~----~~~~~~~-----~~~v~~v~~~~~~~g~~~si~~~l~~ 86 (188)
T TIGR03310 20 LPY-KGKTILEHVVDNALRLFF--DEVIL-VLGHEADE----LVALLAN-----HSNITLVHNPQYAEGQSSSIKLGLEL 86 (188)
T ss_pred ccc-CCeeHHHHHHHHHHHcCC--CcEEE-EeCCcHHH----HHHHhcc-----CCCeEEEECcChhcCHHHHHHHHhcC
Confidence 344 456788899988876542 33333 44443222 2222211 2345555444333346677788887
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhhcCCC
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHNPD 211 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~ 211 (526)
.. +.|.++++++|. .++++.+++++..+..++.
T Consensus 87 ~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~ 120 (188)
T TIGR03310 87 PV---QSDGYLFLLGDQPFVTPDIIQLLLEAFALKND 120 (188)
T ss_pred CC---CCCEEEEEeCCcCCCCHHHHHHHHHHHHhCCC
Confidence 33 679999999997 5699999999987754544
No 102
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=93.51 E-value=1.1 Score=41.75 Aligned_cols=158 Identities=17% Similarity=0.146 Sum_probs=82.8
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC----CCCCCccHHHHHhhh
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS----RNGYKAGALKEGMKH 176 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~----~~g~K~~aln~gl~~ 176 (526)
+..+.+..+++++.+....+ . |+|..| |+..... ++++ +..+.+. |+. ...+...++..|++.
T Consensus 22 ~GkpLi~~ti~~a~~s~~~d--~-IvVstd--~~~i~~~----a~~~---g~~v~~~-r~~~l~~d~~~~~~si~~~l~~ 88 (222)
T TIGR03584 22 CGKPMIAYSIEAALNSGLFD--K-VVVSTD--DEEIAEV----AKSY---GASVPFL-RPKELADDFTGTAPVVKHAIEE 88 (222)
T ss_pred CCcCHHHHHHHHHHhCCCCC--E-EEEeCC--CHHHHHH----HHHc---CCEeEEe-ChHHHcCCCCCchHHHHHHHHH
Confidence 44678899999998766432 2 334333 2222222 2232 3334333 322 122466778888876
Q ss_pred hcc-cCCcEEEEecCCCCC-ChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHH---HHHhhhhhhhhh-hhcccc
Q 009761 177 SYV-KQCDYVAIFDADFEP-EPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRM---QEMSLDYHFTVE-QEVGSS 250 (526)
Q Consensus 177 a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~ 250 (526)
... .+.|.++++++|.-. +++.+.+++..+.+ .+.+.+.+..... .+..... ............ ...+..
T Consensus 89 l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~-~~~ds~~sv~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~rQd 164 (222)
T TIGR03584 89 LKLQKQYDHACCIYATAPFLQAKILKEAFELLKQ-PNAHFVFSVTSFA---FPIQRAFKLKENGGVEMFFPEHFNTRSQD 164 (222)
T ss_pred HhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHh-CCCCEEEEeeccC---CChHHheEECCCCcEEecCCCcccCCCCC
Confidence 411 247999999999655 89999999998854 3344333332211 0000000 000000000000 001122
Q ss_pred CCCcccccccceeeeHHHHHHcCCC
Q 009761 251 TYAFFGFNGTAGVWRISALNEAGGW 275 (526)
Q Consensus 251 ~~~~~~~~G~~~~~Rr~~l~~~gg~ 275 (526)
.......+|+..+++++.+.+-+.+
T Consensus 165 ~~~~y~~nga~y~~~~~~~~~~~~~ 189 (222)
T TIGR03584 165 LEEAYHDAGQFYWGKSQAWLESGPI 189 (222)
T ss_pred CchheeeCCeEEEEEHHHHHhcCCc
Confidence 3334457899999999999876544
No 103
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=93.44 E-value=0.22 Score=47.28 Aligned_cols=104 Identities=16% Similarity=0.164 Sum_probs=58.9
Q ss_pred EEEEEec-CCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHH
Q 009761 93 VLVQIPM-YNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALK 171 (526)
Q Consensus 93 VsViIp~-yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln 171 (526)
.||+|-+ |+..+.|.+.++++.+..+- ..+|+|=.+...+. . . .++...+..++++..+.+ .-.++-
T Consensus 1 fTvvi~t~~~R~~~L~~~l~~l~~~~~l--~~IvVvWn~~~~~P-~-~-----~~~~~~~vpV~~~~~~~n---sLnnRF 68 (247)
T PF09258_consen 1 FTVVINTSYKRSDLLKRLLRHLASSPSL--RKIVVVWNNPNPPP-P-S-----SKWPSTGVPVRVVRSSRN---SLNNRF 68 (247)
T ss_dssp EEEEEEE-SS-HHHHHHHHHHHTTSTTE--EEEEEEEE-TS--T-H-H-----HHHT---S-EEEEEESSH---HGGGGG
T ss_pred CEEEEEecccchHHHHHHHHHHHcCCCC--CeEEEEeCCCCCCC-c-c-----cccCCCCceEEEEecCCc---cHHhcC
Confidence 3788888 99999999999999666543 22332323322211 1 1 122233567777732221 112222
Q ss_pred HHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCC
Q 009761 172 EGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPD 211 (526)
Q Consensus 172 ~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~ 211 (526)
.-.... +.|-|+.+|+|..++++.|+.......++|+
T Consensus 69 ~p~~~i---~T~AVl~~DDDv~~~~~~l~faF~~W~~~pd 105 (247)
T PF09258_consen 69 LPDPEI---ETDAVLSLDDDVMLSCDELEFAFQVWREFPD 105 (247)
T ss_dssp S--TT-----SSEEEEEETTEEE-HHHHHHHHHHHCCSTT
T ss_pred cCcccc---CcceEEEecCCcccCHHHHHHHHHHHHhChh
Confidence 223444 8999999999999999999988887777775
No 104
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=93.31 E-value=0.14 Score=42.99 Aligned_cols=76 Identities=17% Similarity=0.259 Sum_probs=47.5
Q ss_pred CcEEEEEecCCChHHHHHHHHHHH----cCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCC
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAAC----GLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYK 166 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K 166 (526)
-+|+|+||-+|.++.++..|..+. +|.. ...|+|+.-.++... .|
T Consensus 47 ~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~---~y~I~vieQ~~~~~F----------------------------NR 95 (136)
T PF13733_consen 47 HKVAIIIPYRDREEHLRIFLPHLHPFLQRQQL---DYRIFVIEQVDNGPF----------------------------NR 95 (136)
T ss_dssp -EEEEEEEESS-HHHHHHHHHHHHHHHHHTT----EEEEEEEEE-SSS-------------------------------H
T ss_pred cceEEEEEeCCHHHHHHHHHHHHHHHHhhCcc---eEEEEEEeeccCCCC----------------------------ch
Confidence 489999999999987777766442 3432 245556654433221 15
Q ss_pred ccHHHHHhhhhcc-cCCcEEEEecCCCCCChH
Q 009761 167 AGALKEGMKHSYV-KQCDYVAIFDADFEPEPD 197 (526)
Q Consensus 167 ~~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd 197 (526)
+.-+|.|+..|.. .+.|++++-|.|.+|..|
T Consensus 96 g~L~NvGf~eA~~~~~~dc~ifHDVDllP~~~ 127 (136)
T PF13733_consen 96 GKLMNVGFLEALKDDDFDCFIFHDVDLLPEND 127 (136)
T ss_dssp HHHHHHHHHHHHHHS--SEEEEE-TTEEESBT
T ss_pred hhhhhHHHHHHhhccCCCEEEEecccccccCC
Confidence 6678888887754 368999999999988654
No 105
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=93.09 E-value=1.6 Score=40.18 Aligned_cols=103 Identities=16% Similarity=0.112 Sum_probs=59.9
Q ss_pred CcEEEEEecCCCh---HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCC---CC
Q 009761 91 PMVLVQIPMYNEK---EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSR---NG 164 (526)
Q Consensus 91 P~VsViIp~yne~---~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~---~g 164 (526)
|.+-++-|+|... ..+.+.-..+..- |+ +.-+|++|+...|.+ ..+.+ ++ .|...+++..+.+ +.
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL~lV--p~--l~WIVVEd~~~~t~~-va~lL-~~---sgl~y~HL~~~~~~~~~~ 71 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLRLV--PP--LHWIVVEDSEEKTPL-VAELL-RR---SGLMYTHLNAKTPSDPTW 71 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHHhcC--Cc--eEEEEEeCCCCCCHH-HHHHH-HH---cCCceEEeccCCCCCccc
Confidence 5688999999987 3555555555443 33 333455554433322 22222 22 2555555533322 11
Q ss_pred ---CCccHHHHHhhhhccc----CCcEEEEecCCCCCChHHHHHH
Q 009761 165 ---YKAGALKEGMKHSYVK----QCDYVAIFDADFEPEPDFLWRT 202 (526)
Q Consensus 165 ---~K~~aln~gl~~a~~~----~~d~v~~lDaD~~~~pd~L~~l 202 (526)
.-...+|.|++..... ..-+|.|.|+|...+-+.++++
T Consensus 72 ~~~rg~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~em 116 (223)
T cd00218 72 LKPRGVEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEM 116 (223)
T ss_pred CCcccHHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHH
Confidence 1245689999877422 3468999999999998888774
No 106
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=92.96 E-value=3.7 Score=37.71 Aligned_cols=180 Identities=16% Similarity=0.134 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccCCc
Q 009761 104 EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQCD 183 (526)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d 183 (526)
+.+.++.+...+.. .++ |+|.-| |+.+.+.++ ++ |..+..-+...++| ..-+..+++.....+.|
T Consensus 29 pmI~rV~e~a~~s~--~~r--vvVATD--de~I~~av~----~~---G~~avmT~~~h~SG--TdR~~Ev~~~l~~~~~~ 93 (247)
T COG1212 29 PMIVRVAERALKSG--ADR--VVVATD--DERIAEAVQ----AF---GGEAVMTSKDHQSG--TDRLAEVVEKLGLPDDE 93 (247)
T ss_pred hHHHHHHHHHHHcC--CCe--EEEEcC--CHHHHHHHH----Hh---CCEEEecCCCCCCc--cHHHHHHHHhcCCCcce
Confidence 45666666665442 223 335544 333333333 32 44444443333333 34455666655335778
Q ss_pred EEEEecCC-CCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCC----cHHHHHHHH-hhhhhhhhhh--hccccCC-Cc
Q 009761 184 YVAIFDAD-FEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADE----CLMTRMQEM-SLDYHFTVEQ--EVGSSTY-AF 254 (526)
Q Consensus 184 ~v~~lDaD-~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~--~~~~~~~-~~ 254 (526)
+|+-+-.| -..+|.-+..++..++ +.++++++......+..+ +...-.... .+...|.... ..+...+ ..
T Consensus 94 iIVNvQGDeP~i~p~~I~~~~~~L~-~~~~~~aTl~~~i~~~ee~~nPN~VKvV~d~~g~ALYFSRs~iP~~rd~~~~~p 172 (247)
T COG1212 94 IIVNVQGDEPFIEPEVIRAVAENLE-NSNADMATLAVKITDEEEAFNPNVVKVVLDKEGYALYFSRAPIPYGRDNFGGTP 172 (247)
T ss_pred EEEEccCCCCCCCHHHHHHHHHHHH-hCCcceeeeeeecCCHHHhcCCCcEEEEEcCCCcEEEEEcCCCCCcccccCCcc
Confidence 99999999 5569999999999995 447777776654433211 000000000 0111111000 0001000 01
Q ss_pred ccccccceeeeHHHHHHcCCCCCCCccchHHH--HHHHHhCCCeEEEe
Q 009761 255 FGFNGTAGVWRISALNEAGGWKDRTTVEDMDL--AVRASLKGWKFVYV 300 (526)
Q Consensus 255 ~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l--~~rl~~~G~~~~~~ 300 (526)
+.-.=+-..||+.++++...|... .-|+.|- .+|+..+|.|+...
T Consensus 173 ~l~HIGIYayr~~~L~~f~~~~ps-~LE~~E~LEQLR~Le~G~kI~v~ 219 (247)
T COG1212 173 FLRHIGIYAYRAGFLERFVALKPS-PLEKIESLEQLRVLENGEKIHVE 219 (247)
T ss_pred hhheeehHHhHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHcCCeeEEE
Confidence 111122568999999998888774 3355543 46778999998764
No 107
>PLN02917 CMP-KDO synthetase
Probab=92.38 E-value=3.7 Score=40.08 Aligned_cols=183 Identities=16% Similarity=0.110 Sum_probs=89.6
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEee-CCCCCCCccHHHHHhhhhcccC
Q 009761 103 KEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIR-DSRNGYKAGALKEGMKHSYVKQ 181 (526)
Q Consensus 103 ~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~-~~~~g~K~~aln~gl~~a~~~~ 181 (526)
.+.+...++.+..... .+ . |+|..+ ++.... .+.+ .++.++.+ ....+|-.++ ..|++... .+
T Consensus 72 kPLL~~vi~~a~~~~~-~~-~-VVV~~~--~e~I~~----~~~~-----~~v~vi~~~~~~~~GT~~~-~~a~~~l~-~~ 135 (293)
T PLN02917 72 KPMIQRTWERAKLATT-LD-H-IVVATD--DERIAE----CCRG-----FGADVIMTSESCRNGTERC-NEALKKLE-KK 135 (293)
T ss_pred EEHHHHHHHHHHcCCC-CC-E-EEEECC--hHHHHH----HHHH-----cCCEEEeCCcccCCchHHH-HHHHHhcc-CC
Confidence 3578888888876542 22 2 434433 222222 2222 12333322 2334555554 46666541 24
Q ss_pred CcEEEEecCCCC-CChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHH---H-Hhh-hhhh-h-h-hhh-ccccC
Q 009761 182 CDYVAIFDADFE-PEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQ---E-MSL-DYHF-T-V-EQE-VGSST 251 (526)
Q Consensus 182 ~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~---~-~~~-~~~~-~-~-~~~-~~~~~ 251 (526)
.|+++++++|.- ++++.+++++..++++++..+..........+..-..+.. . ... -++. . + +.. .....
T Consensus 136 ~d~Vlil~gD~PlI~~~tI~~li~~~~~~~~~iv~t~~~~~~~~~~~~ygrv~vv~~~~g~alyfsr~~Ipe~kd~~~~~ 215 (293)
T PLN02917 136 YDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDASDPNRVKCVVDNQGYAIYFSRGLIPYNKSGKVNP 215 (293)
T ss_pred CCEEEEecCCcCCCCHHHHHHHHHHHHhcCCceEEEEeeecCHHHhcCCCceEEEECCCCeEEEeecCcCCcCCCccccc
Confidence 689999999955 6999999999987555544433331111100000001110 0 000 0000 0 0 100 00000
Q ss_pred CCcccccccceeeeHHHHHHcCCCCCCCcc-chHHHHHHHHhCCCeEEEec
Q 009761 252 YAFFGFNGTAGVWRISALNEAGGWKDRTTV-EDMDLAVRASLKGWKFVYVG 301 (526)
Q Consensus 252 ~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~-ED~~l~~rl~~~G~~~~~~~ 301 (526)
....-.+.+-.+||++.+.....++.+... |-+-.-+++.++|+++..++
T Consensus 216 ~~i~~~n~Giy~f~~~~L~~l~~l~~~n~e~e~yLtdl~~le~G~~i~~~~ 266 (293)
T PLN02917 216 QFPYLLHLGIQSYDAKFLKIYPELPPTPLQLEEDLEQLKVLENGYKMKVIK 266 (293)
T ss_pred ccceEEEEEEEEeCHHHHHHHHcCCCCcccchhccHHHHHHhCCCceEEEE
Confidence 111224556789999999977656554321 22222235779999987765
No 108
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=92.08 E-value=0.73 Score=50.35 Aligned_cols=181 Identities=12% Similarity=0.136 Sum_probs=95.5
Q ss_pred CCccHHHHHhhhhcccCCcEEEEecCCC--CCChH-HHHHHHhhhhc-----------------CCCEEEEeeEEEEecC
Q 009761 165 YKAGALKEGMKHSYVKQCDYVAIFDADF--EPEPD-FLWRTIPFLVH-----------------NPDIALVQARWKFVNA 224 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~~~d~v~~lDaD~--~~~pd-~L~~lv~~~~~-----------------~~~v~~V~~~~~~~~~ 224 (526)
||..|.|.++--. +||++-.+|+.- -++.. -++.++..|++ .+.+.+++.+-.....
T Consensus 275 GK~eNQNhaiiF~---rGe~lQ~IDmNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IFs~ 351 (817)
T PF02364_consen 275 GKPENQNHAIIFT---RGEYLQTIDMNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIFSE 351 (817)
T ss_pred CCccccceeEEEE---ccccccccccchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEecC
Confidence 7999999999988 999999999862 22211 22345556643 1345666666555554
Q ss_pred CCcHHHHHHHHhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCC----CCccchHHHHHHHHhCCCeEEEe
Q 009761 225 DECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKD----RTTVEDMDLAVRASLKGWKFVYV 300 (526)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~----~~~~ED~~l~~rl~~~G~~~~~~ 300 (526)
+-+.+....+..-..+-...++.-.....-. -=|+-=++.|-....-||... -++.||..-++....+|.++.++
T Consensus 352 ~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rl-HYGHPD~~n~~f~~TRGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~ 430 (817)
T PF02364_consen 352 NVGSLGDFAAGQEQSFGTLFQRTLANPLVRL-HYGHPDVFNRIFMTTRGGVSKASKGLHLSEDIFAGMNATLRGGRIKHC 430 (817)
T ss_pred CcchHHHHhhhhhHHHHHHHHHHHhcchhhc-cCCCchhhhhhheeccCccchHhhcccccHHHHHHHHHHhcCCceeeh
Confidence 4444433322211111111121111000000 114444444444444466554 24899999999999999999987
Q ss_pred ccccccccCCc-ChHHHHHHHHhhhcchH-HHHHhhcccccc-cCCCChhHHHHHH
Q 009761 301 GDLKVKNELPS-TFKAYRYQQHRWSCGPA-NLFKKMVGEIMR-TKKVTLWKKLYVI 353 (526)
Q Consensus 301 ~~~~~~~~~p~-t~~~~~~Qr~RW~~G~~-~~~~~~~~~~~~-~~~~~~~~~~~~~ 353 (526)
.-..| +...+ .+.+-..=..+-+.|+- |.+.+ +..+ ..++++.+-+.+.
T Consensus 431 ey~qc-GKGRD~Gf~~I~~F~~KI~~G~GEQ~LSR---e~yrLg~~ld~~R~LSfy 482 (817)
T PF02364_consen 431 EYIQC-GKGRDVGFNSILNFETKIASGMGEQMLSR---EYYRLGTRLDFFRFLSFY 482 (817)
T ss_pred hhhhc-ccccccCchhhhhhHhHhcCCccchhhhH---HHHHhhccCCHHHHHHHH
Confidence 75544 22221 23332222344456655 44432 2332 2446666555543
No 109
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=92.08 E-value=2.5 Score=39.42 Aligned_cols=97 Identities=19% Similarity=0.215 Sum_probs=60.9
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-+ .+.+..+++++.+..- ++++| |+.. .++...+.. . ..++.++..+.. .|.++++..|++
T Consensus 20 l~~v~g-kpli~~~i~~l~~~~i--~~i~i-v~~~-~~~~i~~~~----~-----~~~~~~~~~~~~-~g~~~ai~~a~~ 84 (229)
T cd02540 20 LHPLAG-KPMLEHVLDAARALGP--DRIVV-VVGH-GAEQVKKAL----A-----NPNVEFVLQEEQ-LGTGHAVKQALP 84 (229)
T ss_pred cceeCC-ccHHHHHHHHHHhCCC--CeEEE-EECC-CHHHHHHHh----C-----CCCcEEEECCCC-CCCHHHHHHHHH
Confidence 355555 4889999999987542 33444 3322 122222111 1 134555544444 458889999988
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhhc
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVH 208 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 208 (526)
... .+.|.++++++|. ..+++.+.+++..+++
T Consensus 85 ~~~-~~~~~vli~~~D~p~~~~~~i~~l~~~~~~ 117 (229)
T cd02540 85 ALK-DFEGDVLVLYGDVPLITPETLQRLLEAHRE 117 (229)
T ss_pred hhc-cCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 761 1268999999998 5688999999887744
No 110
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=91.09 E-value=2.8 Score=37.91 Aligned_cols=101 Identities=18% Similarity=0.119 Sum_probs=57.8
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+....++.+++.+++... +++ ++|... +++..+...+... . ..++.++...+...|...++..|++++...
T Consensus 24 ~g~~ll~~~i~~~~~~~~--~~i-~vv~~~-~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~G~~~si~~gl~~~~~~ 94 (190)
T TIGR03202 24 GETTLGSASLKTALSSRL--SKV-IVVIGE-KYAHLSWLDPYLL-A----DERIMLVCCRDACEGQAHSLKCGLRKAEAM 94 (190)
T ss_pred CCccHHHHHHHHHHhCCC--CcE-EEEeCC-ccchhhhhhHhhh-c----CCCeEEEECCChhhhHHHHHHHHHHHhccC
Confidence 557788888877665322 233 334433 2322221211110 1 123444422332224677888888875223
Q ss_pred CCcEEEEecCC-CCCChHHHHHHHhhhhcCC
Q 009761 181 QCDYVAIFDAD-FEPEPDFLWRTIPFLVHNP 210 (526)
Q Consensus 181 ~~d~v~~lDaD-~~~~pd~L~~lv~~~~~~~ 210 (526)
+.|+++++++| -.++++.+++++..+.+.+
T Consensus 95 ~~d~vlv~~~D~P~v~~~~i~~L~~~~~~~~ 125 (190)
T TIGR03202 95 GADAVVILLADQPFLTADVINALLALAKRRP 125 (190)
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHhhCC
Confidence 57999999999 4559999999998874433
No 111
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=91.08 E-value=3 Score=40.16 Aligned_cols=102 Identities=17% Similarity=0.179 Sum_probs=64.9
Q ss_pred CCcEEEEEecCCChH---HHHHHHHHHHcCCCCCCceEEEEEcC-CCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCC
Q 009761 90 YPMVLVQIPMYNEKE---VYQLSIGAACGLSWPSDRITIQVLDD-STDPTIKDLVELECQRWASKGINIKYEIRDSRNGY 165 (526)
Q Consensus 90 ~P~VsViIp~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~D~-s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 165 (526)
.|.|-|+-|+|+... .+.+.-.++.. -|+-..+| |-|+ +..+.+..++++ .|..-.++..+.+.++
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtRlanTL~~--V~nLhWIV-VEd~~~~~p~v~~~L~r-------tgl~ythl~~~t~~~~ 155 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTRLANTLRL--VPNLHWIV-VEDGEGTTPEVSGILRR-------TGLPYTHLVHKTPMGY 155 (330)
T ss_pred CccEEEEcccccchhHHHHHHHHHHHHhh--cCCeeEEE-EecCCCCCHHHHHHHHH-------cCCceEEEeccCCCCC
Confidence 688999999999983 34443333322 23323322 4555 444444444442 2677777777777776
Q ss_pred C----ccHHHHHhhhhc-----c-cCCcEEEEecCCCCCChHHHHH
Q 009761 166 K----AGALKEGMKHSY-----V-KQCDYVAIFDADFEPEPDFLWR 201 (526)
Q Consensus 166 K----~~aln~gl~~a~-----~-~~~d~v~~lDaD~~~~pd~L~~ 201 (526)
| -..+|.|++... . ...-+|.|-|+|..-+-+..++
T Consensus 156 ~~~rg~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~e 201 (330)
T KOG1476|consen 156 KARRGWEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEE 201 (330)
T ss_pred ccccchhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHH
Confidence 7 457899988763 1 2345788889999988887777
No 112
>PLN02458 transferase, transferring glycosyl groups
Probab=90.93 E-value=4.7 Score=39.18 Aligned_cols=104 Identities=12% Similarity=0.101 Sum_probs=59.4
Q ss_pred CCcEEEEEecCCC-h---HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCC---
Q 009761 90 YPMVLVQIPMYNE-K---EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSR--- 162 (526)
Q Consensus 90 ~P~VsViIp~yne-~---~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~--- 162 (526)
.+.|-||-|+|.. . ..|.+.-..+..-.+| -..+| |-|++..+.+.++++ + .|...+++..+.+
T Consensus 111 ~rlIivVTPTY~rR~~Q~a~LTRLahTL~lVp~p-L~WIV-VEd~~~t~~va~lLr----r---sGl~y~HL~~k~~~~~ 181 (346)
T PLN02458 111 RRLVIIVTPISTKDRYQGVLLRRLANTLRLVPPP-LLWIV-VEGQSDSEEVSEMLR----K---TGIMYRHLVFKENFTD 181 (346)
T ss_pred CceEEEECCCCCCcchhHHHHHHHHHHHhcCCCC-ceEEE-EeCCCCCHHHHHHHH----H---cCCceEEeccCCCCCC
Confidence 4568999999983 3 4566665555544333 22222 444432222222332 2 2555544433222
Q ss_pred -CCCCccHHHHHhhhhcc-cCCcEEEEecCCCCCChHHHHHH
Q 009761 163 -NGYKAGALKEGMKHSYV-KQCDYVAIFDADFEPEPDFLWRT 202 (526)
Q Consensus 163 -~g~K~~aln~gl~~a~~-~~~d~v~~lDaD~~~~pd~L~~l 202 (526)
.+.....+|.|++.... ...-+|.|.|+|...+-+.++++
T Consensus 182 ~~~r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEm 223 (346)
T PLN02458 182 PEAELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEI 223 (346)
T ss_pred ccchhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHH
Confidence 12234568999988742 23468899999999988888774
No 113
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=89.88 E-value=6.9 Score=36.85 Aligned_cols=121 Identities=15% Similarity=0.153 Sum_probs=69.2
Q ss_pred EEEEecCCChHHHHHHHH-HHHcC--CCCCCceEE-EEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC-----
Q 009761 94 LVQIPMYNEKEVYQLSIG-AACGL--SWPSDRITI-QVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNG----- 164 (526)
Q Consensus 94 sViIp~yne~~~l~~~L~-sl~~q--~yp~~~~~I-~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g----- 164 (526)
-|-.-.||.++.+..... ++++. ...++.+.| ++-.||.|.|.+ +.+.+...+...+.+-.+...+....
T Consensus 3 fIA~~l~~~~~iL~~~~~~~ll~li~~LGp~nv~vSIyE~~S~D~T~~-~L~~L~~~L~~lgv~~~i~~~~~~~~~~~~~ 81 (241)
T PF11735_consen 3 FIAANLYNNEDILPSLWGDALLELIRFLGPENVFVSIYESGSWDGTKE-ALRALDAELDALGVPHSIVLSDITHRDEIER 81 (241)
T ss_pred EEEEEcccCHhHHHHHHHHHHHHHHHHhCcCeEEEEEEeCCCCccHHH-HHHHHHHHHHhCCCCeEEEeCCCcccccccc
Confidence 344457777777765555 55432 122233433 344668899877 66666666655566655553221111
Q ss_pred --------CCccHHHHHhhhhc------ccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEee
Q 009761 165 --------YKAGALKEGMKHSY------VKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQA 217 (526)
Q Consensus 165 --------~K~~aln~gl~~a~------~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~ 217 (526)
.-+.-+|.+++-.. ..+.|-|++++ |....++-+.+++..- +..+.+++++
T Consensus 82 ~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~-~~~~~~~aCa 146 (241)
T PF11735_consen 82 PPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTR-NRGNYDMACA 146 (241)
T ss_pred cchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhc-Ccccccchhh
Confidence 12456788876543 13567899999 8778777666776653 2234455444
No 114
>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum. N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=89.80 E-value=3.3 Score=40.36 Aligned_cols=120 Identities=20% Similarity=0.158 Sum_probs=67.1
Q ss_pred CCCcEEEEEecCCCh--HHHHHHHHHHHcCCCCCCc--eEEEEEcCCCchh-HHHHHHHHHHHhhcc--CCcEEEEeeCC
Q 009761 89 AYPMVLVQIPMYNEK--EVYQLSIGAACGLSWPSDR--ITIQVLDDSTDPT-IKDLVELECQRWASK--GINIKYEIRDS 161 (526)
Q Consensus 89 ~~P~VsViIp~yne~--~~l~~~L~sl~~q~yp~~~--~~I~V~D~s~D~t-~~~l~~~~~~~~~~~--~~~v~~~~~~~ 161 (526)
.-++++|=||+-..+ ..+.+||.|++..--|.++ +.|+|.=..+|++ .....+....+++.. ...+.+++.+.
T Consensus 50 ~~~~L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~Er~~i~IvVllAd~Dp~~~~~~~~~i~~~f~~~i~sG~l~VI~~p~ 129 (297)
T PF04666_consen 50 TGKKLCIGIPTVKREKESYLLDTLASLLDGLSPEERKDIVIVVLLADTDPDYHPSVAQNISTRFADHIESGLLEVISPPP 129 (297)
T ss_pred CCCeEEEEecccccCCCchHHHHHHHHHHhCCHHHhcCeEEEEEecCCChhhhHHHHHHHHHHhHHHHHhCceEEEeccc
Confidence 345699999998877 6899999999986666442 3333332222332 222333333322111 11233332221
Q ss_pred C----------CCCC---------ccHHH--HHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcC
Q 009761 162 R----------NGYK---------AGALK--EGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 162 ~----------~g~K---------~~aln--~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~ 209 (526)
. +.+- ..++. ..++.+. ..++|++.+.+|.+..|+|+.++.....+-
T Consensus 130 ~~Yp~l~~l~~~~~d~~~rv~wrsKq~lDya~Lm~y~~-~~~~YyL~LEDDVia~~~f~~~i~~~v~~~ 197 (297)
T PF04666_consen 130 SYYPDLDNLKRNFGDSEERVRWRSKQNLDYAFLMNYCQ-NLGDYYLQLEDDVIAAPGFLSRIKRFVEAW 197 (297)
T ss_pred ccCCChhhhhhcccChhhhhhHHHhhcccHHHHHHHHH-hcCCeEEEecCCeEechhHHHHHHHHHHHh
Confidence 1 0000 00111 2233332 378999999999999999999998877433
No 115
>PLN03153 hypothetical protein; Provisional
Probab=89.64 E-value=1.9 Score=44.72 Aligned_cols=99 Identities=13% Similarity=0.017 Sum_probs=60.3
Q ss_pred cCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCcccccc
Q 009761 180 KQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNG 259 (526)
Q Consensus 180 ~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 259 (526)
++.++++++|+|+.+.++-|.+.+..+. ..+--.++......+. . ..+ +..+..+|
T Consensus 209 pd~kWfVf~DDDTyf~~~NLv~~Ls~YD-ptkp~YIGs~Se~~~q---------n----~~f----------~~~fA~GG 264 (537)
T PLN03153 209 PDVRWFVLGDDDTIFNADNLVAVLSKYD-PSEMVYVGGPSESHSA---------N----SYF----------SHNMAFGG 264 (537)
T ss_pred CCCCEEEEecCCccccHHHHHHHHhhcC-CCCCEEeccccccccc---------c----ccc----------ccccccCC
Confidence 5789999999999998888888777762 2222222222211110 0 000 01123569
Q ss_pred cceeeeHHHHHHcCCCCC-------CCccchHHHHHHHHhCCCeEEEecc
Q 009761 260 TAGVWRISALNEAGGWKD-------RTTVEDMDLAVRASLKGWKFVYVGD 302 (526)
Q Consensus 260 ~~~~~Rr~~l~~~gg~~~-------~~~~ED~~l~~rl~~~G~~~~~~~~ 302 (526)
++.++++.+++++....+ ...++|..++.-+.+.|-+....+.
T Consensus 265 AG~~LSrPLae~L~~~~d~C~~rY~~~~~gD~rL~~CL~elGV~LT~~~g 314 (537)
T PLN03153 265 GGIAISYPLAEALSRILDDCLDRYPKLYGSDDRLHACITELGVPLSREPG 314 (537)
T ss_pred ceEEEcHHHHHHHHHHhhhhhhhcccCCCcHHHHHHHHHHcCCCceecCC
Confidence 999999966665422111 1257899999999998876665553
No 116
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=89.04 E-value=2.4 Score=37.01 Aligned_cols=101 Identities=18% Similarity=0.246 Sum_probs=63.9
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhh
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKH 176 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~ 176 (526)
+|. +....++.+++.+.+... +++ +++..+ ++..+ .. . ..++.++..+....|-..++-.|++.
T Consensus 19 ~~i-~g~~li~~~l~~l~~~~~--~~I-vvv~~~--~~~~~-~~----~-----~~~~~~v~~~~~~~G~~~sl~~a~~~ 82 (160)
T PF12804_consen 19 LPI-GGKPLIERVLEALREAGV--DDI-VVVTGE--EEIYE-YL----E-----RYGIKVVVDPEPGQGPLASLLAALSQ 82 (160)
T ss_dssp SEE-TTEEHHHHHHHHHHHHTE--SEE-EEEEST--HHHHH-HH----T-----TTTSEEEE-STSSCSHHHHHHHHHHT
T ss_pred eeE-CCccHHHHHHHHhhccCC--ceE-EEecCh--HHHHH-HH----h-----ccCceEEEeccccCChHHHHHHHHHh
Confidence 555 777888899988876642 222 323333 22111 11 1 23466664554456678888888887
Q ss_pred hcccCCcEEEEecCCC-CCChHHHHHHHhhhhcCC-CEEEE
Q 009761 177 SYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHNP-DIALV 215 (526)
Q Consensus 177 a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~-~v~~V 215 (526)
.. +.+.++++.+|. .++++.+.+++..+++++ ++.++
T Consensus 83 ~~--~~~~vlv~~~D~p~~~~~~l~~l~~~~~~~~~~i~~~ 121 (160)
T PF12804_consen 83 LP--SSEPVLVLPCDQPFLSPELLRRLLEALEKSPADIVVP 121 (160)
T ss_dssp ST--TSSEEEEEETTETTS-HHHHHHHHHHHHHTTTSEEEE
T ss_pred cc--cCCCcEEEeCCccccCHHHHHHHHHHHhccCCcEEEE
Confidence 52 789999999998 569999999999885443 44433
No 117
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=88.84 E-value=4 Score=37.82 Aligned_cols=101 Identities=9% Similarity=0.059 Sum_probs=59.8
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccH
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGA 169 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~a 169 (526)
.|+. ++|.-+. +.++..++++.+.... .++++... ..+...+... + ...+.++.+........|-+++
T Consensus 20 ~pK~--llpi~g~-~li~~~l~~l~~~gi~---~i~iv~~~-~~~~i~~~~~----~-~~~~~~i~~~~~~~~~~g~~~~ 87 (221)
T cd06422 20 RPKP--LVPVAGK-PLIDHALDRLAAAGIR---RIVVNTHH-LADQIEAHLG----D-SRFGLRITISDEPDELLETGGG 87 (221)
T ss_pred CCCc--eeeECCE-EHHHHHHHHHHHCCCC---EEEEEccC-CHHHHHHHHh----c-ccCCceEEEecCCCcccccHHH
Confidence 4544 5666665 8999999999887543 23324433 2222221221 1 1124455554322123347888
Q ss_pred HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhh
Q 009761 170 LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPF 205 (526)
Q Consensus 170 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~ 205 (526)
+..+.+.. +.|.++++++|.+.+.|....+..+
T Consensus 88 l~~~~~~~---~~~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 88 IKKALPLL---GDEPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred HHHHHHhc---CCCCEEEEeCCeeeCCCHHHHHHHH
Confidence 99998886 5588999999999888866544433
No 118
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=88.76 E-value=4 Score=37.70 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=58.9
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|. +....++.+++++.+.... +++ ++|.++...... +.. ..+ .....+.+. .+..+ ...++..|++
T Consensus 22 l~~i-~Gkpll~~~i~~l~~~~~~-~~i-vVv~~~~~~~~~----~~~-~~~-~~~~~~~~~--~~~~~-~~~si~~al~ 89 (218)
T cd02516 22 FLEL-GGKPVLEHTLEAFLAHPAI-DEI-VVVVPPDDIDLA----KEL-AKY-GLSKVVKIV--EGGAT-RQDSVLNGLK 89 (218)
T ss_pred eeEE-CCeEHHHHHHHHHhcCCCC-CEE-EEEeChhHHHHH----HHH-Hhc-ccCCCeEEE--CCchH-HHHHHHHHHH
Confidence 3444 4567899999999865422 233 334443221111 111 111 011233333 22222 5677888888
Q ss_pred hhcccCCcEEEEecCCCC-CChHHHHHHHhhhhcCC
Q 009761 176 HSYVKQCDYVAIFDADFE-PEPDFLWRTIPFLVHNP 210 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~ 210 (526)
.....+.|.++++++|.- ++++.+++++..+.+++
T Consensus 90 ~~~~~~~~~vlv~~~D~P~i~~~~i~~li~~~~~~~ 125 (218)
T cd02516 90 ALPDADPDIVLIHDAARPFVSPELIDRLIDALKEYG 125 (218)
T ss_pred hcccCCCCEEEEccCcCCCCCHHHHHHHHHHHhhCC
Confidence 751125789999999954 69999999999875443
No 119
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=88.71 E-value=0.62 Score=46.07 Aligned_cols=109 Identities=22% Similarity=0.139 Sum_probs=68.8
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEE-cCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCC------C
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVL-DDSTDPTIKDLVELECQRWASKGINIKYEIRDSR------N 163 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~-D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~------~ 163 (526)
|.|-|.+-.+|-...+..-+..+-++|||+.+.-|++- |.+.|.+++ +.++..+........+++.....+ .
T Consensus 3 ptvl~alL~rn~ah~lp~Flg~le~~Dypk~r~aiw~~~dh~~d~~ie-~freWL~nv~~~y~~V~~e~~~e~~s~~d~~ 81 (568)
T KOG4179|consen 3 PTVLCALLFRNFAHSLPLFLGELEEGDYPKIRPAIWIGVDHEHDHAIE-YFREWLENVGDLYHRVKWEPFIEPKSYPDEH 81 (568)
T ss_pred ceeehHHHHHHHHhhhhhccCChhccCCcccccceEEecCccccchHH-HHHHHHHhcCCccceeEEEecCCccccCccc
Confidence 55666677777777777777767789999988877765 568888887 555555554333344444322111 1
Q ss_pred CC--------------CccHHHHHhhhhcccCCcEEEEecCCCCC-ChHHHHHHHh
Q 009761 164 GY--------------KAGALKEGMKHSYVKQCDYVAIFDADFEP-EPDFLWRTIP 204 (526)
Q Consensus 164 g~--------------K~~aln~gl~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~ 204 (526)
|- |-.|+|.|=+. -.||+++.|.|+.+ ++|.|.-++.
T Consensus 82 ~pk~W~~sr~q~lm~lKeea~~~~r~~----~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 82 GPKHWPDSRFQHLMSLKEEALNWARSG----WADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred CCccCchHHHHHHHHHHHHHHHHHHhh----hcceeEEeehhheeeCCchHhHHHh
Confidence 11 22333333222 47999999999887 6778766554
No 120
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=88.61 E-value=0.19 Score=48.43 Aligned_cols=35 Identities=26% Similarity=0.252 Sum_probs=27.7
Q ss_pred HHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 169 ALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 169 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
.+|.|+-.+ +.||++++|+|+.|..|..-..+..+
T Consensus 82 ~R~fGyL~s---~~~yivsiDDD~~P~~D~~g~~~~~v 116 (348)
T PF03214_consen 82 CRNFGYLVS---KKDYIVSIDDDCLPAKDDFGTHIDAV 116 (348)
T ss_pred hhhhHhhhc---ccceEEEEccccccccCCccceehhh
Confidence 468888888 88999999999999887665554444
No 121
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=88.16 E-value=4.8 Score=36.42 Aligned_cols=43 Identities=16% Similarity=0.223 Sum_probs=34.8
Q ss_pred CCCccHHHHHhhhhcccCCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 164 GYKAGALKEGMKHSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 164 g~K~~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
.|...++..|++.. +.|+++++++|. .++++.+++++..+.++
T Consensus 74 ~g~~~~i~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~ 117 (193)
T PRK00317 74 PGPLAGILAGLKQA---RTEWVLVVPCDTPFIPPDLVARLAQAAGKD 117 (193)
T ss_pred CCCHHHHHHHHHhc---CCCeEEEEcCCcCCCCHHHHHHHHHhhhcC
Confidence 34667888888876 789999999997 66999999999876433
No 122
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=87.82 E-value=5.4 Score=35.57 Aligned_cols=85 Identities=11% Similarity=0.162 Sum_probs=54.9
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+....++.+++.+.+. . +++ ++|..+..+. . . ..++.++..+....|...++..|++..
T Consensus 24 ~g~~ll~~~i~~l~~~-~--~~i-ivv~~~~~~~----~-----~-----~~~~~~v~~~~~~~G~~~si~~~l~~~--- 82 (181)
T cd02503 24 GGKPLLEHVLERLKPL-V--DEV-VISANRDQER----Y-----A-----LLGVPVIPDEPPGKGPLAGILAALRAA--- 82 (181)
T ss_pred CCEEHHHHHHHHHHhh-c--CEE-EEECCCChHH----H-----h-----hcCCcEeeCCCCCCCCHHHHHHHHHhc---
Confidence 4467888888888754 1 233 3233332111 1 0 123444433333445788999999987
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhh
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFL 206 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~ 206 (526)
+.|.++++++|. .++++.+++++..+
T Consensus 83 ~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 83 PADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 789999999997 46999999998876
No 123
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=87.81 E-value=5.2 Score=36.76 Aligned_cols=97 Identities=19% Similarity=0.244 Sum_probs=57.7
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-|. +.+..+++++.+... .++ ++|.+...+ . +.+.. .+....+.++.+...... .|-++++..+.+
T Consensus 23 ll~v~g~-pli~~~l~~l~~~g~--~~i-~vv~~~~~~-~---i~~~~-~~~~~~~~~i~~~~~~~~-~g~~~al~~~~~ 92 (217)
T cd04181 23 LLPIAGK-PILEYIIERLARAGI--DEI-ILVVGYLGE-Q---IEEYF-GDGSKFGVNIEYVVQEEP-LGTAGAVRNAED 92 (217)
T ss_pred ccEECCe-eHHHHHHHHHHHCCC--CEE-EEEeccCHH-H---HHHHH-cChhhcCceEEEEeCCCC-CccHHHHHHhhh
Confidence 3455554 889999999987653 233 334444322 2 22211 111011345655533333 447889999988
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
.. +.|.++++++|.+.+.|.. +++...
T Consensus 93 ~~---~~~~~lv~~~D~~~~~~~~-~~~~~~ 119 (217)
T cd04181 93 FL---GDDDFLVVNGDVLTDLDLS-ELLRFH 119 (217)
T ss_pred hc---CCCCEEEEECCeecCcCHH-HHHHHH
Confidence 86 7889999999998887754 444444
No 124
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule. GT2_BcbE_like: The bcbE gene is one of the genes in the capsule biosynthetic locus of Pasteurella multocida. Its deducted product is likely involved in the biosynthesis of the polysaccharide capsule, which is found on surface of a wide range of bacteria. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=87.19 E-value=5.8 Score=37.01 Aligned_cols=99 Identities=16% Similarity=0.044 Sum_probs=54.7
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|..+. +.++.+++++.++.. +++ ++|. +....... ..+...+.. ..++.+...+....|-++++..+..
T Consensus 23 ll~i~g~-pli~~~l~~l~~~g~--~~i-vvv~-~~~~~~~~-~~~~~~~~~---~~~~~i~~~~~~~~g~~~~l~~a~~ 93 (231)
T cd04183 23 LIEVDGK-PMIEWVIESLAKIFD--SRF-IFIC-RDEHNTKF-HLDESLKLL---APNATVVELDGETLGAACTVLLAAD 93 (231)
T ss_pred eeEECCE-EHHHHHHHhhhccCC--ceE-EEEE-ChHHhhhh-hHHHHHHHh---CCCCEEEEeCCCCCcHHHHHHHHHh
Confidence 4576665 789999999987652 223 3344 22111111 111111111 1233333233344457788888877
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhh
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPF 205 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~ 205 (526)
.. ...+.++++++|.+.+.+....+..+
T Consensus 94 ~l--~~~~~~lv~~~D~i~~~~~~~~~~~~ 121 (231)
T cd04183 94 LI--DNDDPLLIFNCDQIVESDLLAFLAAF 121 (231)
T ss_pred hc--CCCCCEEEEecceeeccCHHHHHHHh
Confidence 65 12477888999999888866544443
No 125
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]
Probab=86.45 E-value=2 Score=39.77 Aligned_cols=98 Identities=15% Similarity=0.082 Sum_probs=61.2
Q ss_pred ChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCC-CCCccHHHHHhhhhccc
Q 009761 102 EKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRN-GYKAGALKEGMKHSYVK 180 (526)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~-g~K~~aln~gl~~a~~~ 180 (526)
-.+.+.++++++.+..- ...++|..+-..+ ++++...++ +.+.+++..+... ++-...+-.|.+..
T Consensus 30 gr~ii~~~i~~L~~~gi---~e~vvV~~g~~~~----lve~~l~~~---~~~~~iv~N~~y~ktN~~~Sl~~akd~~--- 96 (239)
T COG1213 30 GREIIYRTIENLAKAGI---TEFVVVTNGYRAD----LVEEFLKKY---PFNAKIVINSDYEKTNTGYSLLLAKDYM--- 96 (239)
T ss_pred CeEeHHHHHHHHHHcCC---ceEEEEeccchHH----HHHHHHhcC---CcceEEEeCCCcccCCceeEEeeehhhh---
Confidence 34678999999987653 2344466553322 445554554 3355555433322 21344566777887
Q ss_pred CCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEE
Q 009761 181 QCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALV 215 (526)
Q Consensus 181 ~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V 215 (526)
+++ ++++|+|++.+|.+++++++.= .+..+++
T Consensus 97 ~~~-fii~~sD~vye~~~~e~l~~a~--~~~li~d 128 (239)
T COG1213 97 DGR-FILVMSDHVYEPSILERLLEAP--GEGLIVD 128 (239)
T ss_pred cCc-EEEEeCCEeecHHHHHHHHhCc--CCcEEEe
Confidence 666 8889999999999999998752 4444443
No 126
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=86.29 E-value=8.1 Score=40.27 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=60.0
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-|. +.++.+++.+.+... ++++| +... .++... + ...++ +.++.+.....+. |.++++..+.+
T Consensus 27 ll~v~gk-pli~~~l~~l~~~gi--~~ivv-v~~~-~~~~i~---~-~~~~~---~~~~~~~~~~~~~-G~~~sl~~a~~ 93 (446)
T PRK14353 27 LHPVAGR-PMLAHVLAAAASLGP--SRVAV-VVGP-GAEAVA---A-AAAKI---APDAEIFVQKERL-GTAHAVLAARE 93 (446)
T ss_pred cCEECCc-hHHHHHHHHHHhCCC--CcEEE-EECC-CHHHHH---H-Hhhcc---CCCceEEEcCCCC-CcHHHHHHHHH
Confidence 4565554 889999999987653 23433 4433 222222 1 11221 2234444333333 46777877777
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhhcCCCE
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHNPDI 212 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v 212 (526)
... ...|.++++++|. .++++.+++++.+.+++.+.
T Consensus 94 ~l~-~~~~~~lv~~~D~P~i~~~~l~~l~~~~~~~~~~ 130 (446)
T PRK14353 94 ALA-GGYGDVLVLYGDTPLITAETLARLRERLADGADV 130 (446)
T ss_pred HHh-ccCCCEEEEeCCcccCCHHHHHHHHHhHhcCCcE
Confidence 641 1257788899998 78999999998866433343
No 127
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=85.40 E-value=9 Score=35.27 Aligned_cols=98 Identities=17% Similarity=0.178 Sum_probs=56.4
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-|. +.+...++.+.+... +++ +++.+.. ++... +...+.. ..+.++.+. .+....|.++++..+++
T Consensus 23 ll~i~g~-pli~~~l~~l~~~g~--~~v-~vv~~~~-~~~i~---~~~~~~~-~~~~~~~~~-~~~~~~G~~~~l~~a~~ 92 (223)
T cd06915 23 LAPVAGR-PFLEYLLEYLARQGI--SRI-VLSVGYL-AEQIE---EYFGDGY-RGGIRIYYV-IEPEPLGTGGAIKNALP 92 (223)
T ss_pred ccEECCc-chHHHHHHHHHHCCC--CEE-EEEcccC-HHHHH---HHHcCcc-ccCceEEEE-ECCCCCcchHHHHHHHh
Confidence 3555554 789999998887642 223 3344432 22222 2111110 012334344 33334457888888888
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhhh
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFLV 207 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~ 207 (526)
.. +.|.++++++|...+++ +.+++..++
T Consensus 93 ~~---~~~~~lv~~~D~~~~~~-~~~~l~~~~ 120 (223)
T cd06915 93 KL---PEDQFLVLNGDTYFDVD-LLALLAALR 120 (223)
T ss_pred hc---CCCCEEEEECCcccCCC-HHHHHHHHH
Confidence 87 67889999999977665 556666653
No 128
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional
Probab=85.34 E-value=10 Score=35.43 Aligned_cols=99 Identities=9% Similarity=0.047 Sum_probs=56.9
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.+..+++++.+...- ++ +++|.++... . ..+..++++.....++.++ .+..+ ...++..|++...
T Consensus 28 ~gkpll~~~i~~~~~~~~~-~~-ivVv~~~~~~---~-~~~~~~~~~~~~~~~~~~v--~~g~~-r~~sv~~gl~~~~-- 96 (230)
T PRK13385 28 VGEPIFIHALRPFLADNRC-SK-IIIVTQAQER---K-HVQDLMKQLNVADQRVEVV--KGGTE-RQESVAAGLDRIG-- 96 (230)
T ss_pred CCeEHHHHHHHHHHcCCCC-CE-EEEEeChhhH---H-HHHHHHHhcCcCCCceEEc--CCCch-HHHHHHHHHHhcc--
Confidence 5668899999988764322 23 3335543221 2 1122223321111133333 22222 3477778887652
Q ss_pred CCcEEEEecCC-CCCChHHHHHHHhhhhcCC
Q 009761 181 QCDYVAIFDAD-FEPEPDFLWRTIPFLVHNP 210 (526)
Q Consensus 181 ~~d~v~~lDaD-~~~~pd~L~~lv~~~~~~~ 210 (526)
+.|+++++|+| -.++++.+++++..+.+++
T Consensus 97 ~~d~vli~~~d~P~i~~~~i~~li~~~~~~~ 127 (230)
T PRK13385 97 NEDVILVHDGARPFLTQDIIDRLLEGVAKYG 127 (230)
T ss_pred CCCeEEEccCCCCCCCHHHHHHHHHHHhhCC
Confidence 46889999999 5559999999999875443
No 129
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=85.20 E-value=2.2 Score=41.49 Aligned_cols=88 Identities=18% Similarity=0.202 Sum_probs=49.6
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCC--------
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSR-------- 162 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~-------- 162 (526)
..+.|+||+-.+.+.++.-.+.+ .+.+++| |.|. |+... +.. ..|.+..+..+++.
T Consensus 11 ~evdIVi~TI~~~~fL~~~r~~l-----~~~h~ii-V~d~--D~~~~-~~~-------~~G~d~~vy~r~d~~~~Lg~~~ 74 (346)
T PLN03180 11 DELDIVIPTIRNLDFLEMWRPFF-----QPYHLII-VQDG--DPSKE-IKV-------PEGFDYELYNRNDINRILGPKA 74 (346)
T ss_pred CcceEEEeccCchhHHHHHHHhc-----CcccEEE-EecC--Ccccc-eec-------cCCCceeecCHHHHHhhhcccc
Confidence 56899999977766666555543 2233433 5553 22111 110 11333333222111
Q ss_pred --CCCCc-cHHHHHhhhhcccCCcEEEEecCCCCCChH
Q 009761 163 --NGYKA-GALKEGMKHSYVKQCDYVAIFDADFEPEPD 197 (526)
Q Consensus 163 --~g~K~-~aln~gl~~a~~~~~d~v~~lDaD~~~~pd 197 (526)
...|. ..+|.|+-.+ +.+|++.+|+|+.|..|
T Consensus 75 ~~Ip~~~~a~R~fGyL~s---~~~yivsiDDD~~Pa~d 109 (346)
T PLN03180 75 SCISFKDSACRCFGYLVS---KKKYIFTIDDDCFVAKD 109 (346)
T ss_pred cccccCcccchhhhheee---cceEEEEECCCCCCCCC
Confidence 11222 3467888777 89999999999999777
No 130
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=84.20 E-value=9.1 Score=34.27 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=35.3
Q ss_pred CCCccHHHHHhhhhcccCCcEEEEecCCC-CCChHHHHHHHhhhh
Q 009761 164 GYKAGALKEGMKHSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLV 207 (526)
Q Consensus 164 g~K~~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 207 (526)
.|..+++..|++.. +.|+++++++|. .++++.+++++..+.
T Consensus 73 ~g~~~si~~al~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 114 (186)
T TIGR02665 73 PGPLAGILAGLRWA---GTDWVLTVPCDTPFLPEDLVARLAAALE 114 (186)
T ss_pred CCCHHHHHHHHHhc---CCCeEEEEecCCCcCCHHHHHHHHHHhh
Confidence 35788888999887 789999999996 679999999998874
No 131
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=83.79 E-value=8.3 Score=38.15 Aligned_cols=53 Identities=21% Similarity=0.321 Sum_probs=39.0
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhh---cCCCEEEEeeEEEE
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLV---HNPDIALVQARWKF 221 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~---~~~~v~~V~~~~~~ 221 (526)
-..-+|.|.+.+ +.++++++|.|.+|.++.-+.+.+... ...+...|-.....
T Consensus 115 iN~LRNvAr~~a---~T~~v~~~DvD~~ps~~l~~~l~~~~~~~~~~~~~a~VvPaFE~ 170 (317)
T PF13896_consen 115 INLLRNVARSGA---RTDYVFLLDVDFLPSPGLYEKLLRFARRNIDKSKTAFVVPAFET 170 (317)
T ss_pred hHHHHHHHHHhc---CcceEEEecceeeeCcchHHHHHHHhhhhccCCceEEEEeeeec
Confidence 445579999999 999999999999999987776655432 33456666555543
No 132
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase. This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in
Probab=83.45 E-value=14 Score=34.44 Aligned_cols=97 Identities=15% Similarity=0.116 Sum_probs=53.3
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-|. +.++..++++.+... .++ ++|+.. ..+...+.. .+....+.++.++...... |.++++..+.+
T Consensus 25 l~~i~g~-~li~~~l~~l~~~~~--~~i-~vv~~~-~~~~~~~~~----~~~~~~~~~i~~~~~~~~~-g~~~sl~~a~~ 94 (236)
T cd04189 25 LIPVAGK-PIIQYAIEDLREAGI--EDI-GIVVGP-TGEEIKEAL----GDGSRFGVRITYILQEEPL-GLAHAVLAARD 94 (236)
T ss_pred eeEECCc-chHHHHHHHHHHCCC--CEE-EEEcCC-CHHHHHHHh----cchhhcCCeEEEEECCCCC-ChHHHHHHHHH
Confidence 5666555 889999999987643 233 334433 222222222 1111113455555333333 47888888887
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
.. +.+-++++.+|...+++.. +++..+
T Consensus 95 ~i---~~~~~li~~~D~~~~~~~~-~~~~~~ 121 (236)
T cd04189 95 FL---GDEPFVVYLGDNLIQEGIS-PLVRDF 121 (236)
T ss_pred hc---CCCCEEEEECCeecCcCHH-HHHHHH
Confidence 76 4333455888988887755 454443
No 133
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=83.44 E-value=8.4 Score=38.28 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=39.3
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHH
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVEL 142 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~ 142 (526)
+.+.|+|-++|..+.++..|+|+.+...-.. ..++++.|--+++...+++.
T Consensus 31 ~~~vivvqVH~r~~yl~~li~sL~~~~~I~~-~llifSHd~~~~ein~~v~~ 81 (356)
T PF05060_consen 31 DSIVIVVQVHNRPEYLKLLIDSLSQARGIEE-ALLIFSHDFYSEEINDLVQS 81 (356)
T ss_pred CCEEEEEEECCcHHHHHHHHHHHHHhhCccc-eEEEEeccCChHHHHHHHHh
Confidence 6799999999999999999999998765543 34447777666666667663
No 134
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.
Probab=83.41 E-value=7 Score=36.59 Aligned_cols=101 Identities=14% Similarity=0.170 Sum_probs=56.1
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhh-ccCCcEEEEeeCCCCCCCccHHHHHh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWA-SKGINIKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~-~~~~~v~~~~~~~~~g~K~~aln~gl 174 (526)
++|+.+. +.+..+++++.++... ++.| |+....+ ...+..+ +++ ..+.++.+.. +....|-++++..+.
T Consensus 25 llpv~g~-pli~~~l~~l~~~g~~--~v~i-v~~~~~~-~~~~~l~----~~~~~~~~~i~~~~-~~~~~G~~~al~~a~ 94 (233)
T cd06425 25 LVEFCNK-PMIEHQIEALAKAGVK--EIIL-AVNYRPE-DMVPFLK----EYEKKLGIKITFSI-ETEPLGTAGPLALAR 94 (233)
T ss_pred cCeECCc-chHHHHHHHHHHCCCc--EEEE-EeeeCHH-HHHHHHh----cccccCCeEEEecc-CCCCCccHHHHHHHH
Confidence 4566665 7899999999887543 3333 4433222 2221222 221 1233443332 223345788888888
Q ss_pred hhhcccCCcEEEEecCCCCCChHHHHHHHhhhhc
Q 009761 175 KHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH 208 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 208 (526)
+.....+.+ ++++++|.+.+.+ +.+++...++
T Consensus 95 ~~~~~~~~~-~lv~~~D~~~~~~-~~~~~~~~~~ 126 (233)
T cd06425 95 DLLGDDDEP-FFVLNSDVICDFP-LAELLDFHKK 126 (233)
T ss_pred HHhccCCCC-EEEEeCCEeeCCC-HHHHHHHHHH
Confidence 876211134 5777999887766 4677765543
No 135
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=82.67 E-value=24 Score=30.86 Aligned_cols=94 Identities=19% Similarity=0.153 Sum_probs=57.3
Q ss_pred EEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHH
Q 009761 124 TIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTI 203 (526)
Q Consensus 124 ~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv 203 (526)
+|+|.|+ |...+..+|...++. +.++.-.+..+++.-.+.-+-..++.+ +..+.++.+|+--......=++.+
T Consensus 2 VIlvTDG--D~~A~ravE~aa~~i---GgRCIS~S~GNPT~lsG~elV~lIk~a--~~DPV~VMfDD~G~~g~G~GE~Al 74 (180)
T PF14097_consen 2 VILVTDG--DEYAKRAVEIAAKNI---GGRCISQSAGNPTPLSGEELVELIKQA--PHDPVLVMFDDKGFIGEGPGEQAL 74 (180)
T ss_pred EEEEECC--hHHHHHHHHHHHHHh---CcEEEeccCCCCCcCCHHHHHHHHHhC--CCCCEEEEEeCCCCCCCCccHHHH
Confidence 3557787 666666666665553 444433333344443455667778887 245677777777666666666777
Q ss_pred hhhhcCCCEEEEeeEEEEecC
Q 009761 204 PFLVHNPDIALVQARWKFVNA 224 (526)
Q Consensus 204 ~~~~~~~~v~~V~~~~~~~~~ 224 (526)
.+...+|++.+...--...|.
T Consensus 75 ~~v~~h~~IeVLG~iAVASnT 95 (180)
T PF14097_consen 75 EYVANHPDIEVLGAIAVASNT 95 (180)
T ss_pred HHHHcCCCceEEEEEEEEecC
Confidence 777678887766554444443
No 136
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=82.54 E-value=6.5 Score=35.94 Aligned_cols=88 Identities=11% Similarity=0.094 Sum_probs=55.3
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+....++.+++.+... .+++ + |+-+. .+. . +... ..++.++.......|-..++..|++..
T Consensus 31 ~g~~ll~~~i~~l~~~---~~~i-v-vv~~~-~~~---~-~~~~------~~~~~~i~~~~~~~G~~~si~~~l~~~--- 91 (200)
T PRK02726 31 QGVPLLQRVARIAAAC---ADEV-Y-IITPW-PER---Y-QSLL------PPGCHWLREPPPSQGPLVAFAQGLPQI--- 91 (200)
T ss_pred CCEeHHHHHHHHHHhh---CCEE-E-EECCC-HHH---H-Hhhc------cCCCeEecCCCCCCChHHHHHHHHHhC---
Confidence 4567888899888643 1222 3 33221 111 1 1110 123555544444345678899999987
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhhh
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFLV 207 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 207 (526)
+.|+++++++|. .++++.+++++...+
T Consensus 92 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 92 KTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 779999999995 459999999998774
No 137
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=81.96 E-value=15 Score=38.34 Aligned_cols=103 Identities=14% Similarity=0.132 Sum_probs=61.9
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-++ +.++.+++++.+.... +++| ++.. .++..+ +...+ .++.+...... .|.++++..+++
T Consensus 22 l~~i~gk-pli~~~l~~l~~~g~~--~iii-v~~~-~~~~i~----~~~~~-----~~i~~~~~~~~-~G~~~ai~~a~~ 86 (451)
T TIGR01173 22 LHPLAGK-PMLEHVIDAARALGPQ--KIHV-VYGH-GAEQVR----KALAN-----RDVNWVLQAEQ-LGTGHAVLQALP 86 (451)
T ss_pred hceeCCc-cHHHHHHHHHHhCCCC--eEEE-EECC-CHHHHH----HHhcC-----CCcEEEEcCCC-CchHHHHHHHHH
Confidence 4555554 8899999999876532 3333 3332 222222 22112 23455433333 447788888887
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhhcCCCEEEEe
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHNPDIALVQ 216 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V~ 216 (526)
... +.|.++++++|. ..+++.++++++.+++ .+..++.
T Consensus 87 ~l~--~~~~~lv~~~D~p~i~~~~~~~l~~~~~~-~~~~~~~ 125 (451)
T TIGR01173 87 FLP--DDGDVLVLYGDVPLISAETLERLLEAHRQ-NGITLLT 125 (451)
T ss_pred hcC--CCCcEEEEECCcCCcCHHHHHHHHHHHhh-CCEEEEE
Confidence 761 347899999998 6789999999887743 3444443
No 138
>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety. CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm.
Probab=81.34 E-value=28 Score=32.05 Aligned_cols=95 Identities=17% Similarity=0.268 Sum_probs=53.6
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC----CCCCCccHHHHHhhh
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS----RNGYKAGALKEGMKH 176 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~----~~g~K~~aln~gl~~ 176 (526)
+..+.++.+++.+.+.... ++ |+|+.+ ++...+. +.++ +..+.+. ++. ...+...++..+++.
T Consensus 24 ~Gkpll~~~l~~l~~~~~~-~~--IvV~~~--~~~i~~~----~~~~---~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~ 90 (223)
T cd02513 24 GGKPLIAWTIEAALESKLF-DR--VVVSTD--DEEIAEV----ARKY---GAEVPFL-RPAELATDTASSIDVILHALDQ 90 (223)
T ss_pred CCccHHHHHHHHHHhCCCC-CE--EEEECC--cHHHHHH----HHHh---CCCceee-CChHHCCCCCCcHHHHHHHHHH
Confidence 4467788999888865422 22 334332 2222212 2221 2222233 221 112356677777776
Q ss_pred hcc--cCCcEEEEecCCCC-CChHHHHHHHhhhhc
Q 009761 177 SYV--KQCDYVAIFDADFE-PEPDFLWRTIPFLVH 208 (526)
Q Consensus 177 a~~--~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~ 208 (526)
... .+.|.++++++|.- ++++.+++++..+.+
T Consensus 91 l~~~~~~~d~vlv~~~D~P~i~~~~i~~~i~~~~~ 125 (223)
T cd02513 91 LEELGRDFDIVVLLQPTSPLRSAEDIDEAIELLLS 125 (223)
T ss_pred HHHhCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHh
Confidence 411 12589999999964 589999999998754
No 139
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=81.34 E-value=17 Score=38.07 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=61.0
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|..+. +.++.+++++.+... .++.+ +..... +. +.+.. .+ +..+.+...+... |.++++..+++
T Consensus 25 l~pi~g~-pli~~~l~~l~~~gi--~~iii-v~~~~~-~~---i~~~~-~~----~~~i~~~~~~~~~-Gt~~al~~a~~ 90 (459)
T PRK14355 25 MHPLAGR-PMVSWPVAAAREAGA--GRIVL-VVGHQA-EK---VREHF-AG----DGDVSFALQEEQL-GTGHAVACAAP 90 (459)
T ss_pred eceeCCc-cHHHHHHHHHHhcCC--CeEEE-EECCCH-HH---HHHHh-cc----CCceEEEecCCCC-CHHHHHHHHHH
Confidence 5666665 788899999887543 23333 444322 21 22222 11 2256565444433 47788888887
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhhc
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVH 208 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 208 (526)
... ...|.++++++|. ..+++.++++++.+++
T Consensus 91 ~l~-~~~~~vlv~~gD~p~~~~~~i~~l~~~~~~ 123 (459)
T PRK14355 91 ALD-GFSGTVLILCGDVPLLRAETLQGMLAAHRA 123 (459)
T ss_pred Hhh-ccCCcEEEEECCccCcCHHHHHHHHHHHHh
Confidence 751 1257899999998 6789999999987643
No 140
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism]
Probab=81.12 E-value=16 Score=34.14 Aligned_cols=172 Identities=17% Similarity=0.219 Sum_probs=93.0
Q ss_pred CCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcc
Q 009761 100 YNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYV 179 (526)
Q Consensus 100 yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~ 179 (526)
++....++.+|+.++.. |..+.+|+++....|+..+...+ ...+.++.++ .+... .......|++....
T Consensus 29 l~g~pll~~tl~~f~~~--~~i~~Ivvv~~~~~~~~~~~~~~------~~~~~~v~~v--~GG~~-R~~SV~~gL~~~~~ 97 (230)
T COG1211 29 LGGRPLLEHTLEAFLES--PAIDEIVVVVSPEDDPYFEKLPK------LSADKRVEVV--KGGAT-RQESVYNGLQALSK 97 (230)
T ss_pred ECCEEehHHHHHHHHhC--cCCCeEEEEEChhhhHHHHHhhh------hccCCeEEEe--cCCcc-HHHHHHHHHHHhhc
Confidence 35556789999998754 34444555666555665554443 1124456555 22222 45566788887721
Q ss_pred cCCcEEEEecCC-CCCChHHHHHHHhhhhcCCCEEEEeeEEE--E--ecCCCcHHHHHHHHhhhhhhhhhhhccccCCCc
Q 009761 180 KQCDYVAIFDAD-FEPEPDFLWRTIPFLVHNPDIALVQARWK--F--VNADECLMTRMQEMSLDYHFTVEQEVGSSTYAF 254 (526)
Q Consensus 180 ~~~d~v~~lDaD-~~~~pd~L~~lv~~~~~~~~v~~V~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (526)
...|+|++.|+= -..+++.+++++..- .+.+.+...-+.. . .+.+....... -++...
T Consensus 98 ~~~~~VlvHDaaRPf~~~~~i~~li~~~-~~~~aai~alpv~DTik~~~~~~~i~~t~--------------~R~~l~-- 160 (230)
T COG1211 98 YDSDWVLVHDAARPFLTPKLIKRLIELA-DKYGAAILALPVTDTLKRVDADGNIVETV--------------DRSGLW-- 160 (230)
T ss_pred cCCCEEEEeccccCCCCHHHHHHHHHhh-ccCCcEEEEeeccCcEEEecCCCCeeecc--------------Chhhhh--
Confidence 248999999997 777999999999543 3333332222211 1 11111110000 011111
Q ss_pred ccccccceeeeHHHHHHcC--CCCC-CCccchHHHHHHHHhCCCeEEEecccc
Q 009761 255 FGFNGTAGVWRISALNEAG--GWKD-RTTVEDMDLAVRASLKGWKFVYVGDLK 304 (526)
Q Consensus 255 ~~~~G~~~~~Rr~~l~~~g--g~~~-~~~~ED~~l~~rl~~~G~~~~~~~~~~ 304 (526)
..=+--+|+.+.+.+.- ++.+ ...+||..+.-++ |+++..++...
T Consensus 161 --~~QTPQ~F~~~~L~~a~~~a~~~~~~~tDdas~~e~~---G~~v~lV~G~~ 208 (230)
T COG1211 161 --AAQTPQAFRLELLKQALARAFAEGREITDDASAIEKA---GGPVSLVEGSA 208 (230)
T ss_pred --hhhCCccccHHHHHHHHHHHHhcCCCcCCHHHHHHHc---CCCeEEEecCc
Confidence 11234667777766531 1222 3577888776654 88888876543
No 141
>PF05045 RgpF: Rhamnan synthesis protein F; InterPro: IPR007739 This family consists of a group of proteins which are related to the Streptococcal rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O-polysaccharides found in phytopathogenic bacteria and are regarded as pathogenic factors [].
Probab=79.93 E-value=48 Score=35.06 Aligned_cols=174 Identities=14% Similarity=0.200 Sum_probs=88.5
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCcc
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAG 168 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~ 168 (526)
..++|.|++=+|-++ .+++.++.+.+...+ ..++|.-++.+.. + .+++..++.+. -.++.+... ++.|.--+
T Consensus 263 ~~~kiav~lHv~Y~D-Ll~E~l~~l~~~p~~---~Dl~ITt~~~~~~-~-~i~~~l~~~~~-~~~~~v~vv-~NrGRDi~ 334 (498)
T PF05045_consen 263 SKKKIAVHLHVFYPD-LLEEILDYLANIPFP---YDLFITTDSEEKK-E-EIEEILAKRPG-FKNAEVRVV-ENRGRDIL 334 (498)
T ss_pred CCCcEEEEEEEEcHh-hHHHHHHHHHhCCCC---eEEEEECCchhhH-H-HHHHHHHhccC-CCceEEEEe-CCCCccHH
Confidence 457899999888876 355666666555433 4565664433322 2 33333333211 124444433 33443445
Q ss_pred HHHHHhhhhc-ccCCcEEEEecCCCCCC--------------------hHHHHHHHhhhhcCCCEEEEeeEEEEecCC--
Q 009761 169 ALKEGMKHSY-VKQCDYVAIFDADFEPE--------------------PDFLWRTIPFLVHNPDIALVQARWKFVNAD-- 225 (526)
Q Consensus 169 aln~gl~~a~-~~~~d~v~~lDaD~~~~--------------------pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~-- 225 (526)
++-.+++... ..++|+|+.+.+--.++ ++...+++..|++||++|+|.....+....
T Consensus 335 pfLv~~~~~l~~~~YD~v~~~HtKKS~~~~~~~g~~wr~~l~~~LL~s~~~v~~Il~~F~~~p~lGlv~P~~~~~~~~~~ 414 (498)
T PF05045_consen 335 PFLVGLKDELLDSKYDYVCHLHTKKSPHNDRSDGDSWRRELLDNLLGSKEYVDNILSAFEDDPRLGLVIPDISHFRYPTI 414 (498)
T ss_pred HHHHHHHHHhccCCccEEEEEEcccCcCcCcchHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCCceEEeCCccccccccc
Confidence 5543333321 13899999987653333 244566677888899999998765322111
Q ss_pred -CcHHHHHHHH-hhhhhhhhhhhccccCCCcccccccceeeeHHHHHHc
Q 009761 226 -ECLMTRMQEM-SLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEA 272 (526)
Q Consensus 226 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~ 272 (526)
..|....... .+......... .....+....|+..-+|.++++.+
T Consensus 415 ~~~w~~N~~~~~~L~~rlg~~~~--~~~~~~~~p~GtMFW~R~~AL~~L 461 (498)
T PF05045_consen 415 GDAWGENREIMKELAKRLGITKP--IDDDTFFFPYGTMFWFRPEALRPL 461 (498)
T ss_pred cccccccHHHHHHHHHHcCCCCC--CccCCccccCccEEEeeHHHHHHH
Confidence 1221111111 01110111100 011222223499999999999875
No 142
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=79.92 E-value=24 Score=33.04 Aligned_cols=93 Identities=17% Similarity=0.103 Sum_probs=53.4
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.++.+++++.+...- ++ ++++.++ +... +..+++ +.++.+. .+...+|.++ +..+++..
T Consensus 25 ~GkPli~~~i~~l~~~~~~-~~-ivv~t~~---~~i~----~~~~~~---~~~v~~~-~~~~~~g~~~-~~~a~~~~--- 87 (238)
T PRK13368 25 LGKPMIQHVYERAAQAAGV-EE-VYVATDD---QRIE----DAVEAF---GGKVVMT-SDDHLSGTDR-LAEVMLKI--- 87 (238)
T ss_pred CCcCHHHHHHHHHHhcCCC-Ce-EEEECCh---HHHH----HHHHHc---CCeEEec-CccCCCccHH-HHHHHHhC---
Confidence 3456788888888875221 22 3323332 2222 222222 3444332 2233344443 44455554
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhhhcCC
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFLVHNP 210 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~ 210 (526)
+.|.++++++|. ...++.+.+++..+.+++
T Consensus 88 ~~d~~lv~~~D~P~i~~~~i~~l~~~~~~~~ 118 (238)
T PRK13368 88 EADIYINVQGDEPMIRPRDIDTLIQPMLDDP 118 (238)
T ss_pred CCCEEEEEcCCcCcCCHHHHHHHHHHHHHCC
Confidence 678999999997 678999999998875444
No 143
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase.
Probab=79.41 E-value=36 Score=32.03 Aligned_cols=184 Identities=15% Similarity=0.139 Sum_probs=87.3
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.+..+++.+.+.. -+++ +++.|+ +... ..++++ +.++. .......+|.. ....+++.....
T Consensus 22 ~GkPli~~~le~~~~~~--~d~V-vVvt~~---~~i~----~~~~~~---g~~~v-~~~~~~~~Gt~-r~~~~~~~l~~~ 86 (238)
T TIGR00466 22 FGKPMIVHVAENANESG--ADRC-IVATDD---ESVA----QTCQKF---GIEVC-MTSKHHNSGTE-RLAEVVEKLALK 86 (238)
T ss_pred CCcCHHHHHHHHHHhCC--CCeE-EEEeCH---HHHH----HHHHHc---CCEEE-EeCCCCCChhH-HHHHHHHHhCCC
Confidence 34567888888887543 2333 334442 2222 222332 33322 21233344432 223333322111
Q ss_pred CCcEEEEecCCCC-CChHHHHHHHhhhhcCCCEEEEeeEEEEecCC----CcHHHHHHH-Hhhhhhhhhh--hhcccc--
Q 009761 181 QCDYVAIFDADFE-PEPDFLWRTIPFLVHNPDIALVQARWKFVNAD----ECLMTRMQE-MSLDYHFTVE--QEVGSS-- 250 (526)
Q Consensus 181 ~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~--~~~~~~-- 250 (526)
+.|+|+++|+|.- ++|+.+.+++..+. +++.+++..-....+.. .+....... ......+... ...++.
T Consensus 87 ~~d~Vli~~gD~Pli~~~~I~~li~~~~-~~~~~~a~~~~~~~d~~~~~~p~~vk~v~~~~g~alyfsr~~ip~~R~~~~ 165 (238)
T TIGR00466 87 DDERIVNLQGDEPFIPKEIIRQVADNLA-TKNVPMAALAVKIHDAEEAFNPNAVKVVLDSQGYALYFSRSLIPFDRDFFA 165 (238)
T ss_pred CCCEEEEEcCCcCcCCHHHHHHHHHHHh-cCCCCEEEEeeecCCHHHccCCCceEEEeCCCCeEEEecCCCCCCCCCccc
Confidence 5689999999954 69999999999873 43333333322221100 000000000 0000000000 000000
Q ss_pred ----CCC-cccccccceeeeHHHHHHcCCCCCCC--ccchHHHHHHHHhCCCeEEEec
Q 009761 251 ----TYA-FFGFNGTAGVWRISALNEAGGWKDRT--TVEDMDLAVRASLKGWKFVYVG 301 (526)
Q Consensus 251 ----~~~-~~~~~G~~~~~Rr~~l~~~gg~~~~~--~~ED~~l~~rl~~~G~~~~~~~ 301 (526)
... ...-+=+-.+||++++++.-.++... ..|+.| .+|+..+|+++....
T Consensus 166 ~~~tpq~~~~~~h~Giy~~~~~~L~~~~~~~~~~le~~e~le-qlr~le~g~~i~~~~ 222 (238)
T TIGR00466 166 KRQTPVGDNLLRHIGIYGYRAGFIEEYVAWKPCVLEEIEKLE-QLRVLYYGEKIHVKI 222 (238)
T ss_pred ccccccccceeEEEEEEeCCHHHHHHHHhCCCCcccccchhH-HHhhhhcCCceEEEE
Confidence 000 01112336789999999986665533 345555 468889999987754
No 144
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=78.91 E-value=7.7 Score=36.57 Aligned_cols=99 Identities=17% Similarity=0.253 Sum_probs=62.4
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|..|..+.+...|+.+.+.... ++ |+|+-+...+... +...+....+.++.++..+...| -++|+..+..
T Consensus 24 ll~i~g~~pli~~~l~~l~~~g~~--~i-i~V~~~~~~~~i~----~~~~~~~~~~~~i~~i~~~~~~G-ta~al~~a~~ 95 (248)
T PF00483_consen 24 LLPIGGKYPLIDYVLENLANAGIK--EI-IVVVNGYKEEQIE----EHLGSGYKFGVKIEYIVQPEPLG-TAGALLQALD 95 (248)
T ss_dssp GSEETTEEEHHHHHHHHHHHTTCS--EE-EEEEETTTHHHHH----HHHTTSGGGTEEEEEEEESSSSC-HHHHHHHTHH
T ss_pred cceecCCCcchhhhhhhhcccCCc--eE-EEEEeeccccccc----ccccccccccccceeeecccccc-hhHHHHHHHH
Confidence 477888878999999999886532 23 3344433222222 22222211234577775555554 8999999988
Q ss_pred hhcccCCc----EEEEecCCCCCChHHHHHHHhhh
Q 009761 176 HSYVKQCD----YVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d----~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
.. +.+ .++++.+|.+.+.+ +.++++..
T Consensus 96 ~i---~~~~~~~~~lv~~gD~i~~~~-~~~~l~~~ 126 (248)
T PF00483_consen 96 FI---EEEDDDEDFLVLNGDIIFDDD-LQDMLEFH 126 (248)
T ss_dssp HH---TTSEE-SEEEEETTEEEESTT-HHHHHHHH
T ss_pred Hh---hhccccceEEEEeccccccch-hhhHHHhh
Confidence 87 444 59999999988874 45555544
No 145
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide. CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design.
Probab=78.69 E-value=23 Score=33.17 Aligned_cols=101 Identities=14% Similarity=0.109 Sum_probs=54.6
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|. +..+.++..++.+.+..-. ++ ++++.++ +. + ++...++ +.++.+. .+...+|.++ +..+++
T Consensus 20 l~~i-~gkpll~~~l~~l~~~~~i-~~-ivvv~~~---~~---i-~~~~~~~---~~~~~~~-~~~~~~gt~~-~~~~~~ 84 (239)
T cd02517 20 LADI-AGKPMIQHVYERAKKAKGL-DE-VVVATDD---ER---I-ADAVESF---GGKVVMT-SPDHPSGTDR-IAEVAE 84 (239)
T ss_pred Cccc-CCcCHHHHHHHHHHhCCCC-CE-EEEECCc---HH---H-HHHHHHc---CCEEEEc-CcccCchhHH-HHHHHH
Confidence 3444 4467888899888765211 22 3334331 21 2 2222222 3333332 2222334443 444455
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhhcCCCE
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHNPDI 212 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v 212 (526)
.. ....|.++++++|. .++++.+.+++..+.++++.
T Consensus 85 ~~-~~~~d~vlv~~gD~Pli~~~~l~~l~~~~~~~~~~ 121 (239)
T cd02517 85 KL-DADDDIVVNVQGDEPLIPPEMIDQVVAALKDDPGV 121 (239)
T ss_pred hc-CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 44 11138899999998 78999999999877544333
No 146
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional
Probab=78.37 E-value=17 Score=35.57 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=58.0
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|+++. +.+...|+++....- +.+++|......+..++.. .+...-+.++.+...+++. |-++|+..+.+
T Consensus 28 Llpv~gk-PmI~~~l~~l~~aGi---~~I~ii~~~~~~~~~~~~l----~~g~~~g~~i~y~~q~~~~-Gta~Al~~a~~ 98 (292)
T PRK15480 28 LLPIYDK-PMIYYPLSTLMLAGI---RDILIISTPQDTPRFQQLL----GDGSQWGLNLQYKVQPSPD-GLAQAFIIGEE 98 (292)
T ss_pred EeEECCE-EHHHHHHHHHHHCCC---CEEEEEecCCchHHHHHHH----cCccccCceeEEEECCCCC-CHHHHHHHHHH
Confidence 6899987 789999999887643 2333344332222222222 1111125667777554444 58999988888
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
... +.++++++ +|++....-+.+++...
T Consensus 99 ~i~--~~~~~lv~-gD~i~~~~~l~~ll~~~ 126 (292)
T PRK15480 99 FIG--GDDCALVL-GDNIFYGHDLPKLMEAA 126 (292)
T ss_pred HhC--CCCEEEEE-CCeeeeccCHHHHHHHH
Confidence 762 34666665 66555444567777654
No 147
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch. ADP-glucose pyrophosphorylase (glucose-1-phosphate adenylyltransferase) catalyzes a very important step in the biosynthesis of alpha 1,4-glucans (glycogen or starch) in bacteria and plants: synthesis of the activated glucosyl donor, ADP-glucose, from glucose-1-phosphate and ATP. ADP-glucose pyrophosphorylase is a tetrameric allosterically regulated enzyme. While a homotetramer in bacteria, in plant chloroplasts and amyloplasts, it is a heterotetramer of two different, yet evolutionary related, subunits. There are a number of conserved regions in the sequence of bacterial and plant ADP-glucose pyrophosphorylase subunits. It is a subfamily of a very diverse glycosy transferase family 2.
Probab=78.35 E-value=21 Score=32.46 Aligned_cols=109 Identities=10% Similarity=0.057 Sum_probs=60.1
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHH--Hhhc--cCCcEEEEee-----C
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQ--RWAS--KGINIKYEIR-----D 160 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~--~~~~--~~~~v~~~~~-----~ 160 (526)
.|+. ++|..|..+.++.+++.+.+... +++ ++|..... +. +.+...+ +|.. ...++.+... +
T Consensus 19 ~pK~--llpv~g~~pli~~~l~~l~~~gi--~~i-ivv~~~~~-~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (200)
T cd02508 19 RAKP--AVPFGGRYRLIDFPLSNMVNSGI--RNV-GVLTQYKS-RS---LNDHLGSGKEWDLDRKNGGLFILPPQQRKGG 89 (200)
T ss_pred Ccce--eeEECCeeeeHHHHHHHHHHCCC--CEE-EEEeCCCh-HH---HHHHHhCCCcccCCCCCCCEEEeCcccCCCC
Confidence 4554 78888875788889988887543 223 33444322 22 2222211 1100 0112444421 1
Q ss_pred CCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhc
Q 009761 161 SRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH 208 (526)
Q Consensus 161 ~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 208 (526)
+...|-++++..+.+.....+.|.++++-+|.+. +..+.+++...++
T Consensus 90 ~~~~Gta~al~~a~~~i~~~~~~~~lv~~gD~v~-~~~~~~~l~~~~~ 136 (200)
T cd02508 90 DWYRGTADAIYQNLDYIERSDPEYVLILSGDHIY-NMDYREMLDFHIE 136 (200)
T ss_pred CcccCcHHHHHHHHHHHHhCCCCEEEEecCCEEE-ecCHHHHHHHHHH
Confidence 2334578899888876521235788899999854 4457777775533
No 148
>PLN03183 acetylglucosaminyltransferase family protein; Provisional
Probab=78.17 E-value=87 Score=32.24 Aligned_cols=108 Identities=17% Similarity=0.070 Sum_probs=61.0
Q ss_pred CCCCCcEEEEEecC-CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHH-hhccCCcEEEEeeCC--C
Q 009761 87 NSAYPMVLVQIPMY-NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQR-WASKGINIKYEIRDS--R 162 (526)
Q Consensus 87 ~~~~P~VsViIp~y-ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~-~~~~~~~v~~~~~~~--~ 162 (526)
+...|+++-+|-++ |+.+.++++|+++- .|+..+.|-++-.+++....++....... ......++.++.+.. .
T Consensus 74 ~~~~~r~AYLI~~h~~d~~~l~RLL~aLY---hprN~y~IHlDkKS~~~er~~l~~~v~~~~~~~~~~NV~vl~k~~~V~ 150 (421)
T PLN03183 74 QDKLPRFAYLVSGSKGDLEKLWRTLRALY---HPRNQYVVHLDLESPAEERLELASRVENDPMFSKVGNVYMITKANLVT 150 (421)
T ss_pred CCCCCeEEEEEEecCCcHHHHHHHHHHhc---CCCceEEEEecCCCChHHHHHHHHHhhccchhhccCcEEEEecceeec
Confidence 34578999999999 77799999998773 45445555455456654333232221110 011235777764432 2
Q ss_pred CCCCc------cHHHHHhhhhcccCCcEEEEecCCCCC--ChHHH
Q 009761 163 NGYKA------GALKEGMKHSYVKQCDYVAIFDADFEP--EPDFL 199 (526)
Q Consensus 163 ~g~K~------~aln~gl~~a~~~~~d~v~~lDaD~~~--~pd~L 199 (526)
-||-. .++...++.+ .+.||+..+.+.+.| +.|.+
T Consensus 151 WGG~S~V~AtL~~m~~LL~~~--~~WDyfinLSGsDyPLkTqdel 193 (421)
T PLN03183 151 YRGPTMVANTLHACAILLKRS--KDWDWFINLSASDYPLVTQDDL 193 (421)
T ss_pred cCChHHHHHHHHHHHHHHhhC--CCCCEEEEccCCcccccCHHHH
Confidence 22211 1122333433 378999999998877 55543
No 149
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form. This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.
Probab=77.77 E-value=16 Score=35.55 Aligned_cols=99 Identities=12% Similarity=0.056 Sum_probs=57.0
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|+++. +.+...|+++...... .+++|......+..+ +...+...-+.++.+...+++. |-++|+-.+.+
T Consensus 24 Llpv~gk-PmI~~~L~~l~~aGi~---~I~iv~~~~~~~~~~----~~lg~g~~~g~~i~~~~q~~~~-Gta~al~~a~~ 94 (286)
T TIGR01207 24 LLPIYDK-PMIYYPLSTLMLAGIR---DILIISTPQDTPRFQ----QLLGDGSQWGVNLSYAVQPSPD-GLAQAFIIGED 94 (286)
T ss_pred eeEECCE-EhHHHHHHHHHHCCCC---EEEEEecCCcHHHHH----HHhccccccCceEEEEEccCCC-CHHHHHHHHHH
Confidence 6888887 8889999888876532 233244322222222 1211111125567776544444 48999988888
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
... +.++++++ +|+...+.-+.+++...
T Consensus 95 ~l~--~~~~~li~-gD~i~~~~~l~~ll~~~ 122 (286)
T TIGR01207 95 FIG--GDPSALVL-GDNIFYGHDLSDLLKRA 122 (286)
T ss_pred HhC--CCCEEEEE-CCEeccccCHHHHHHHH
Confidence 761 34566655 66555555566766654
No 150
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=76.19 E-value=45 Score=32.28 Aligned_cols=100 Identities=14% Similarity=0.190 Sum_probs=53.0
Q ss_pred cEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEE-cCCCchhHHHHHHHHHHHhhccCCcEEEEeeC---CC-----
Q 009761 92 MVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVL-DDSTDPTIKDLVELECQRWASKGINIKYEIRD---SR----- 162 (526)
Q Consensus 92 ~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~-D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~---~~----- 162 (526)
+++|+....|=.+.+..++.|++.-. +..+.+.|. |+.+++..+.+.+.. + ..+..+.....+ +.
T Consensus 2 ~~~iv~~~~~y~~~~~~~i~Sil~n~--~~~~~fhii~d~~s~~~~~~l~~~~-~---~~~~~i~f~~i~~~~~~~~~~~ 75 (280)
T cd06431 2 HVAIVCAGYNASRDVVTLVKSVLFYR--RNPLHFHLITDEIARRILATLFQTW-M---VPAVEVSFYNAEELKSRVSWIP 75 (280)
T ss_pred EEEEEEccCCcHHHHHHHHHHHHHcC--CCCEEEEEEECCcCHHHHHHHHHhc-c---ccCcEEEEEEhHHhhhhhccCc
Confidence 47788888555588899999998754 232444444 555555545343321 1 123445544322 11
Q ss_pred CCCCccH---HHHHhhhhcccCCcEEEEecCCCCCChH
Q 009761 163 NGYKAGA---LKEGMKHSYVKQCDYVAIFDADFEPEPD 197 (526)
Q Consensus 163 ~g~K~~a---ln~gl~~a~~~~~d~v~~lDaD~~~~pd 197 (526)
+...+.. ....+......+.|=|+.+|+|.++..|
T Consensus 76 ~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~d 113 (280)
T cd06431 76 NKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATD 113 (280)
T ss_pred ccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCC
Confidence 1111111 0112222222257899999999888654
No 151
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=76.03 E-value=35 Score=35.96 Aligned_cols=101 Identities=9% Similarity=0.064 Sum_probs=60.1
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|..+. ..++.+++++.+... .+++| ++... ++. +.+.. .+. ...+.+.. ++...|.++++-.|++
T Consensus 26 llpi~gk-pli~~~l~~l~~~g~--~~iiv-vv~~~-~~~---i~~~~-~~~---~~~~~~~~-~~~~~Gt~~si~~al~ 92 (482)
T PRK14352 26 LHTLAGR-SMLGHVLHAAAGLAP--QHLVV-VVGHD-RER---VAPAV-AEL---APEVDIAV-QDEQPGTGHAVQCALE 92 (482)
T ss_pred eceeCCc-cHHHHHHHHHHhcCC--CcEEE-EECCC-HHH---HHHHh-hcc---CCccEEEe-CCCCCCcHHHHHHHHH
Confidence 5666664 489999999987643 23444 44332 222 22211 111 12344443 3334457888888888
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
.......|.++++++|. .++++.+++++...++.
T Consensus 93 ~l~~~~~~~vlV~~gD~P~~~~~~l~~li~~~~~~ 127 (482)
T PRK14352 93 ALPADFDGTVVVTAGDVPLLDGETLADLVATHTAE 127 (482)
T ss_pred HhccCCCCeEEEEeCCeeccCHHHHHHHHHHHHhc
Confidence 75211247899999998 57889999998876433
No 152
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase. N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repre
Probab=75.94 E-value=26 Score=33.33 Aligned_cols=108 Identities=13% Similarity=0.071 Sum_probs=60.0
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHHcC-CCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAACGL-SWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~~q-~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
..|+. ++|+-+. +.|+..|+++.+. ... .+++|+....+ .......... ...+..+.+....+.. |-+
T Consensus 20 ~~PK~--llpv~g~-plI~~~l~~l~~~~gi~---~i~iv~~~~~~-~i~~~l~~~~---~~~~~~i~~~~~~~~~-Gt~ 88 (257)
T cd06428 20 DVPKP--LFPVAGK-PMIHHHIEACAKVPDLK---EVLLIGFYPES-VFSDFISDAQ---QEFNVPIRYLQEYKPL-GTA 88 (257)
T ss_pred CCCcc--cCeECCe-eHHHHHHHHHHhcCCCc---EEEEEecCCHH-HHHHHHHhcc---cccCceEEEecCCccC-CcH
Confidence 34544 5777776 8999999999874 432 23334443222 2221222111 1123455555333333 478
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhc
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH 208 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 208 (526)
+++..+.+.......|.++++.+|.+.+.| +..++...++
T Consensus 89 ~al~~a~~~l~~~~~~~~lv~~gD~~~~~d-l~~~~~~h~~ 128 (257)
T cd06428 89 GGLYHFRDQILAGNPSAFFVLNADVCCDFP-LQELLEFHKK 128 (257)
T ss_pred HHHHHHHHHhhccCCCCEEEEcCCeecCCC-HHHHHHHHHH
Confidence 887776665411135778899999887655 6677765533
No 153
>COG2068 Uncharacterized MobA-related protein [General function prediction only]
Probab=75.57 E-value=46 Score=30.24 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=63.9
Q ss_pred CCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcc
Q 009761 100 YNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYV 179 (526)
Q Consensus 100 yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~ 179 (526)
++....+..+++..++-.+. + ++|+-+.. ..+ ..+... .+.+++++..+....|-+..+..|++++..
T Consensus 28 ~~g~plv~~~~~~a~~a~~~--~--vivV~g~~--~~~-~~~a~~-----~~~~~~~v~npd~~~Gls~Sl~ag~~a~~~ 95 (199)
T COG2068 28 LDGKPLVRASAETALSAGLD--R--VIVVTGHR--VAE-AVEALL-----AQLGVTVVVNPDYAQGLSTSLKAGLRAADA 95 (199)
T ss_pred cCCCcHHHHHHHHHHhcCCC--e--EEEEeCcc--hhh-HHHhhh-----ccCCeEEEeCcchhhhHhHHHHHHHHhccc
Confidence 44456778888877765432 3 33444433 112 222221 135677776777777799999999999821
Q ss_pred cCCcEEEEecCCCC-CChHHHHHHHhhhhcC
Q 009761 180 KQCDYVAIFDADFE-PEPDFLWRTIPFLVHN 209 (526)
Q Consensus 180 ~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 209 (526)
.+|.++++=+|.- +.|+.+.+++..+.++
T Consensus 96 -~~~~v~~~lgDmP~V~~~t~~rl~~~~~~~ 125 (199)
T COG2068 96 -EGDGVVLMLGDMPQVTPATVRRLIAAFRAR 125 (199)
T ss_pred -CCCeEEEEeCCCCCCCHHHHHHHHHhcccc
Confidence 1259999999954 8999999999998433
No 154
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=75.07 E-value=22 Score=33.89 Aligned_cols=198 Identities=14% Similarity=0.114 Sum_probs=104.4
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|+|+.+ .+.-+|+.+....- +.+++|++..+-+..+++...- . .-+.++.|...+++.| -+.|.-.|-+
T Consensus 25 LlpV~~KP-mi~y~l~~L~~aGI---~dI~II~~~~~~~~~~~llGdg-s---~~gv~itY~~Q~~p~G-lA~Av~~a~~ 95 (286)
T COG1209 25 LLPVYDKP-MIYYPLETLMLAGI---RDILIVVGPEDKPTFKELLGDG-S---DFGVDITYAVQPEPDG-LAHAVLIAED 95 (286)
T ss_pred cceecCcc-hhHhHHHHHHHcCC---ceEEEEecCCchhhhhhhhcCc-c---ccCcceEEEecCCCCc-HHHHHHHHHh
Confidence 58888854 56666776665543 2334355544444444333211 1 1278999998888877 8999888888
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhhhc-CCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCc
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH-NPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAF 254 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~-~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (526)
.. .+.++++++.+..... -+++.+..+.+ +++..+.... ..|+. |.--.+++.........+......
T Consensus 96 fv--~~~~f~l~LGDNi~~~--~l~~~~~~~~~~~~ga~i~~~~--V~dP~-----rfGV~e~d~~~~v~~l~EKP~~P~ 164 (286)
T COG1209 96 FV--GDDDFVLYLGDNIFQD--GLSELLEHFAEEGSGATILLYE--VDDPS-----RYGVVEFDEDGKVIGLEEKPKEPK 164 (286)
T ss_pred hc--CCCceEEEecCceecc--ChHHHHHHHhccCCCcEEEEEE--cCCcc-----cceEEEEcCCCcEEEeEECCCCCC
Confidence 77 2467777776555544 56677776643 2332222221 22321 110011110001111111111111
Q ss_pred ccc-cccceeeeHHHHHHcCCCCCCC--ccchHHHHHHHHhCCCeEEEecccccc--ccCCcCh
Q 009761 255 FGF-NGTAGVWRISALNEAGGWKDRT--TVEDMDLAVRASLKGWKFVYVGDLKVK--NELPSTF 313 (526)
Q Consensus 255 ~~~-~G~~~~~Rr~~l~~~gg~~~~~--~~ED~~l~~rl~~~G~~~~~~~~~~~~--~~~p~t~ 313 (526)
.++ .-...+|+.++++.+....+.. =.|=.|....+..+|..+......-.| +-.|+++
T Consensus 165 SNlAvtGlY~~d~~Vf~~~~~ikPS~RGElEITd~i~~~i~~G~~~~~~~~~G~WlDtGt~~sl 228 (286)
T COG1209 165 SNLAVTGLYFYDPSVFEAIKQIKPSARGELEITDAIDLYIEKGYLVVAILIRGWWLDTGTPESL 228 (286)
T ss_pred CceeEEEEEEeChHHHHHHHcCCCCCCCceEehHHHHHHHHcCcEEEEEEccceEEecCChhhH
Confidence 111 1236889999998875443322 224566677788999988877644333 3445554
No 155
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=74.69 E-value=26 Score=33.82 Aligned_cols=19 Identities=37% Similarity=0.606 Sum_probs=16.0
Q ss_pred CCcEEEEecCCCCC--ChHHH
Q 009761 181 QCDYVAIFDADFEP--EPDFL 199 (526)
Q Consensus 181 ~~d~v~~lDaD~~~--~pd~L 199 (526)
+.|=|+++|+|+++ +|+.+
T Consensus 90 sFeevllLDaD~vpl~~p~~l 110 (271)
T PF11051_consen 90 SFEEVLLLDADNVPLVDPEKL 110 (271)
T ss_pred CcceEEEEcCCcccccCHHHH
Confidence 88999999999888 56655
No 156
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=74.10 E-value=36 Score=35.40 Aligned_cols=99 Identities=8% Similarity=0.021 Sum_probs=58.4
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-+ .+.++.+|+++.+.... +++| |+... ++..+ +...+ ..++.++. +.+..|-++++..+++
T Consensus 23 ll~v~g-kpli~~~l~~l~~~g~~--~iiv-vv~~~-~~~i~----~~~~~----~~~i~~v~-~~~~~G~~~sv~~~~~ 88 (450)
T PRK14360 23 LHPLGG-KSLVERVLDSCEELKPD--RRLV-IVGHQ-AEEVE----QSLAH----LPGLEFVE-QQPQLGTGHAVQQLLP 88 (450)
T ss_pred cCEECC-hhHHHHHHHHHHhCCCC--eEEE-EECCC-HHHHH----HHhcc----cCCeEEEE-eCCcCCcHHHHHHHHH
Confidence 456544 48999999999876442 3433 44332 22222 12111 12455663 3333446777777776
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
... ...+.++++|+|. .+.++.++++++.+++.
T Consensus 89 ~l~-~~~~~vlV~~~D~P~i~~~~l~~ll~~~~~~ 122 (450)
T PRK14360 89 VLK-GFEGDLLVLNGDVPLLRPETLEALLNTHRSS 122 (450)
T ss_pred Hhh-ccCCcEEEEeCCccccCHHHHHHHHHHHHhc
Confidence 651 1245678899997 56889999998876443
No 157
>PLN03133 beta-1,3-galactosyltransferase; Provisional
Probab=73.77 E-value=1.4e+02 Score=32.48 Aligned_cols=107 Identities=17% Similarity=0.054 Sum_probs=61.7
Q ss_pred CCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEE-----ecCCCcHHHHHHHHhhhhhhhhhhhccccCCCcc
Q 009761 181 QCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKF-----VNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFF 255 (526)
Q Consensus 181 ~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (526)
+.+|++-.|+|..+..+-|.+.+... ++.-+...|.... ++....|.-... + ......+.
T Consensus 475 ~akFilK~DDDvFVnv~~Ll~~L~~~--~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~----------e---yp~~~YPp 539 (636)
T PLN03133 475 SAKYVMKTDDDAFVRVDEVLASLKRT--NVSHGLLYGLINSDSQPHRNPDSKWYISPE----------E---WPEETYPP 539 (636)
T ss_pred CceEEEEcCCceEEcHHHHHHHHHhc--CCCCceEEEEeccCCCcccCCCCCCCCCHH----------H---CCCCCCCC
Confidence 78999999999999888666655432 2222333343321 111111110000 0 01112344
Q ss_pred cccccceeeeHHHHHHcCC-----CCCCCccchHHHHHHHH---hCCCeEEEecc
Q 009761 256 GFNGTAGVWRISALNEAGG-----WKDRTTVEDMDLAVRAS---LKGWKFVYVGD 302 (526)
Q Consensus 256 ~~~G~~~~~Rr~~l~~~gg-----~~~~~~~ED~~l~~rl~---~~G~~~~~~~~ 302 (526)
.+.|.+.++.+++.+.+-. .-...-.||..++.-+. +.|.++.+..+
T Consensus 540 YasG~gYVlS~Dla~~L~~~s~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~ 594 (636)
T PLN03133 540 WAHGPGYVVSRDIAKEVYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYEND 594 (636)
T ss_pred CCCcCEEEEcHHHHHHHHHhhhhcccCcCChhhHhHHHHHHHhcccCCCceeeCC
Confidence 4679999999999987621 11223579999999875 35766666654
No 158
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.
Probab=73.34 E-value=49 Score=31.29 Aligned_cols=37 Identities=16% Similarity=0.066 Sum_probs=29.3
Q ss_pred CccHHHHHhhhhcccCC-cEEEEecCCCCCChHHHHHHHhhh
Q 009761 166 KAGALKEGMKHSYVKQC-DYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~-d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
.++++-.+.+.. .. |.++++++|.+.+.|. ..+++..
T Consensus 104 t~~al~~a~~~~---~~~~~~lv~~gD~i~~~dl-~~ll~~h 141 (253)
T cd02524 104 TGGRLKRVRRYL---GDDETFMLTYGDGVSDVNI-NALIEFH 141 (253)
T ss_pred cHHHHHHHHHhc---CCCCeEEEEcCCEEECCCH-HHHHHHH
Confidence 577888888776 54 8899999999988777 7787654
No 159
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=72.75 E-value=30 Score=35.12 Aligned_cols=91 Identities=13% Similarity=0.128 Sum_probs=53.5
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.++.+++.+.+...- +++ ++|+++. +. + ..+.....+ ..+.++ ....+ ...++..|++..
T Consensus 31 ~GkPll~~tl~~l~~~~~i-~~I-vVVv~~~-~~--~-~~~~~~~~~----~~v~~v--~gG~~-r~~SV~~gL~~l--- 94 (378)
T PRK09382 31 GGKPLWLHVLENLSSAPAF-KEI-VVVIHPD-DI--A-YMKKALPEI----KFVTLV--TGGAT-RQESVRNALEAL--- 94 (378)
T ss_pred CCeeHHHHHHHHHhcCCCC-CeE-EEEeChH-HH--H-HHHHhcccC----CeEEEe--CCCch-HHHHHHHHHHhc---
Confidence 4567889999998865321 233 3344332 21 1 222111110 113333 11111 456678888876
Q ss_pred CCcEEEEecCC-CCCChHHHHHHHhhhh
Q 009761 181 QCDYVAIFDAD-FEPEPDFLWRTIPFLV 207 (526)
Q Consensus 181 ~~d~v~~lDaD-~~~~pd~L~~lv~~~~ 207 (526)
+.|++++.|+| -.++++.+++++..+.
T Consensus 95 ~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 95 DSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred CCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 66999999999 5669999999998874
No 160
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=72.47 E-value=46 Score=35.12 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=58.5
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-+. +.++.+++++.+... ++++| |.... .+..+ + ..+ +.++.++..+.+ .|.++++..|++
T Consensus 29 llpi~gk-pli~~~l~~l~~~gi--~~ivv-v~~~~-~~~i~---~-~~~-----~~~i~~v~~~~~-~Gt~~al~~~~~ 93 (481)
T PRK14358 29 LHPVAGR-PMVAWAVKAARDLGA--RKIVV-VTGHG-AEQVE---A-ALQ-----GSGVAFARQEQQ-LGTGDAFLSGAS 93 (481)
T ss_pred ecEECCe-eHHHHHHHHHHhCCC--CeEEE-EeCCC-HHHHH---H-Hhc-----cCCcEEecCCCc-CCcHHHHHHHHH
Confidence 4566554 889999999887643 23333 44432 22222 1 111 234666643333 347888888877
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhhcCC
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHNP 210 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~ 210 (526)
.....+.+ ++++++|. .+.++.+++++...++++
T Consensus 94 ~l~~~~~~-~lV~~gD~P~i~~~~l~~ll~~~~~~~ 128 (481)
T PRK14358 94 ALTEGDAD-ILVLYGDTPLLRPDTLRALVADHRAQG 128 (481)
T ss_pred HhhCCCCc-EEEEeCCeeccCHHHHHHHHHHHHhcC
Confidence 65211234 67799997 678889999987764433
No 161
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat. Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.
Probab=70.62 E-value=42 Score=31.24 Aligned_cols=96 Identities=13% Similarity=0.189 Sum_probs=51.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCC-chhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDST-DPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~-D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl 174 (526)
+.|. +....++.+++.+.+.... +++ +++.+... |+... ..+.. .++.++..+. .+. -+....++
T Consensus 18 ll~l-~Gkpli~~~i~~l~~~~~~-~~i-vVv~~~~~~~~~i~----~~~~~-----~~v~~v~~~~-~~~-l~~~~~~~ 83 (233)
T cd02518 18 LKPL-GGKPLLEHLLDRLKRSKLI-DEI-VIATSTNEEDDPLE----ALAKK-----LGVKVFRGSE-EDV-LGRYYQAA 83 (233)
T ss_pred cccc-CCccHHHHHHHHHHhCCCC-CeE-EEECCCCcccHHHH----HHHHH-----cCCeEEECCc-hhH-HHHHHHHH
Confidence 3443 4467889999988865422 223 33444332 22222 12222 1333442222 221 11222333
Q ss_pred hhhcccCCcEEEEecCCCC-CChHHHHHHHhhhhc
Q 009761 175 KHSYVKQCDYVAIFDADFE-PEPDFLWRTIPFLVH 208 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~ 208 (526)
+.. +.|+++++++|.- ++++.+++++..+.+
T Consensus 84 ~~~---~~d~vli~~~D~P~i~~~~i~~li~~~~~ 115 (233)
T cd02518 84 EEY---NADVVVRITGDCPLIDPEIIDAVIRLFLK 115 (233)
T ss_pred HHc---CCCEEEEeCCCCCCCCHHHHHHHHHHHHh
Confidence 333 6899999999954 599999999987743
No 162
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=68.82 E-value=32 Score=31.90 Aligned_cols=96 Identities=17% Similarity=0.145 Sum_probs=56.7
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC-CCCCCcc
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS-RNGYKAG 168 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~-~~g~K~~ 168 (526)
.|+- ++|.-+ ...++.+++++.+.... ++.| |+.. ..+... + ...+ +.++.++..+. ...|.++
T Consensus 19 ~pK~--l~~~~g-~~li~~~l~~l~~~gi~--~i~v-v~~~-~~~~~~---~-~~~~----~~~~~~~~~~~~~~~g~~~ 83 (229)
T cd02523 19 RPKC--LLEING-KPLLERQIETLKEAGID--DIVI-VTGY-KKEQIE---E-LLKK----YPNIKFVYNPDYAETNNIY 83 (229)
T ss_pred CCce--eeeECC-EEHHHHHHHHHHHCCCc--eEEE-Eecc-CHHHHH---H-HHhc----cCCeEEEeCcchhhhCcHH
Confidence 3444 455544 48899999999876432 3333 4433 222222 1 1111 13455553332 2344778
Q ss_pred HHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHh
Q 009761 169 ALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIP 204 (526)
Q Consensus 169 aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~ 204 (526)
++..+.+.. .+.++++++|...+++.++.+..
T Consensus 84 s~~~~~~~~----~~~~lv~~~D~~~~~~~~~~~~~ 115 (229)
T cd02523 84 SLYLARDFL----DEDFLLLEGDVVFDPSILERLLS 115 (229)
T ss_pred HHHHHHHHc----CCCEEEEeCCEecCHHHHHHHHc
Confidence 888887765 36788999999998887776654
No 163
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=68.77 E-value=54 Score=34.18 Aligned_cols=95 Identities=12% Similarity=0.090 Sum_probs=57.6
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-+. +.++.+++++.+... +++++ ++... ++..+ +.. +.++.+... ....|.++++..+++
T Consensus 24 ll~i~Gk-pli~~~l~~l~~~gi--~~iiv-vv~~~-~~~i~---~~~-------~~~~~~~~~-~~~~g~~~al~~a~~ 87 (458)
T PRK14354 24 LHKVCGK-PMVEHVVDSVKKAGI--DKIVT-VVGHG-AEEVK---EVL-------GDRSEFALQ-EEQLGTGHAVMQAEE 87 (458)
T ss_pred hCEeCCc-cHHHHHHHHHHhCCC--CeEEE-EeCCC-HHHHH---HHh-------cCCcEEEEc-CCCCCHHHHHHHHHH
Confidence 4566665 889999999987543 23333 43332 22222 211 112344433 333346778888877
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhh
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLV 207 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 207 (526)
... ...|.++++++|. ..+++.++++++..+
T Consensus 88 ~l~-~~~d~vlv~~~D~p~i~~~~l~~li~~~~ 119 (458)
T PRK14354 88 FLA-DKEGTTLVICGDTPLITAETLKNLIDFHE 119 (458)
T ss_pred Hhc-ccCCeEEEEECCccccCHHHHHHHHHHHH
Confidence 651 1247899999997 678999999988763
No 164
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=68.66 E-value=74 Score=30.62 Aligned_cols=94 Identities=18% Similarity=0.177 Sum_probs=54.4
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccH
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGA 169 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~a 169 (526)
.|+- ++|..++...++.+++.+....-. +++.| |... .. ...+++...+ ...++.++..+... |.++|
T Consensus 22 ~PK~--ll~l~g~~~li~~~l~~l~~~~~~-~~i~v-vt~~-~~---~~~v~~~l~~---~~~~~~ii~ep~~~-gTa~a 89 (274)
T cd02509 22 YPKQ--FLKLFGDKSLLQQTLDRLKGLVPP-DRILV-VTNE-EY---RFLVREQLPE---GLPEENIILEPEGR-NTAPA 89 (274)
T ss_pred CCce--EeEcCCCCcHHHHHHHHHhcCCCC-CcEEE-Eech-HH---HHHHHHHHhh---cCCCceEEECCCCC-CcHHH
Confidence 4544 577778789999999998865312 23333 3332 11 1122222222 12345565444443 47888
Q ss_pred HHHHhhhhcc-cCCcEEEEecCCCCCC
Q 009761 170 LKEGMKHSYV-KQCDYVAIFDADFEPE 195 (526)
Q Consensus 170 ln~gl~~a~~-~~~d~v~~lDaD~~~~ 195 (526)
+..+...... ...+.++++.+|+...
T Consensus 90 i~~a~~~~~~~~~~~~vlVl~~D~~i~ 116 (274)
T cd02509 90 IALAALYLAKRDPDAVLLVLPSDHLIE 116 (274)
T ss_pred HHHHHHHHHhcCCCCeEEEecchhccc
Confidence 8777766521 1357999999998875
No 165
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=68.55 E-value=86 Score=29.32 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=51.9
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhh
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKH 176 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~ 176 (526)
+|. +..+.++.+++.+.+..- +++ +++.+ . +... + ...++ +..+.+. .+...+|.++.. .++..
T Consensus 22 l~i-~Gkpll~~~l~~l~~~~i--~~i-vvv~~-~--~~i~---~-~~~~~---~~~v~~~-~~~~~~gt~~~~-~~~~~ 85 (245)
T PRK05450 22 ADI-GGKPMIVRVYERASKAGA--DRV-VVATD-D--ERIA---D-AVEAF---GGEVVMT-SPDHPSGTDRIA-EAAAK 85 (245)
T ss_pred ccc-CCcCHHHHHHHHHHhcCC--CeE-EEECC-c--HHHH---H-HHHHc---CCEEEEC-CCcCCCchHHHH-HHHHh
Confidence 344 446788888988876521 233 32333 1 2222 2 22221 3333332 223333343332 33332
Q ss_pred hcccCCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 177 SYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 177 a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
....+.|.++++++|. .++++.+++++....++
T Consensus 86 ~~~~~~~~vlv~~~D~Pli~~~~l~~li~~~~~~ 119 (245)
T PRK05450 86 LGLADDDIVVNVQGDEPLIPPEIIDQVAEPLANP 119 (245)
T ss_pred cCCCCCCEEEEecCCCCCCCHHHHHHHHHHHhcC
Confidence 2111468899999998 78999999999877433
No 166
>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed
Probab=67.77 E-value=73 Score=29.49 Aligned_cols=95 Identities=20% Similarity=0.203 Sum_probs=55.2
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.++.+++.+.+.... +++ ++|.++. + .+.+.+..... ..++.+. .+..+ ...++..|++.. +
T Consensus 29 ~g~pli~~~l~~l~~~~~~-~~i-vvv~~~~-~--~~~~~~~~~~~----~~~~~~~--~~~~~-~~~sv~~~l~~~--~ 94 (227)
T PRK00155 29 GGKPILEHTLEAFLAHPRI-DEI-IVVVPPD-D--RPDFAELLLAK----DPKVTVV--AGGAE-RQDSVLNGLQAL--P 94 (227)
T ss_pred CCEEHHHHHHHHHHcCCCC-CEE-EEEeChH-H--HHHHHHHhhcc----CCceEEe--CCcch-HHHHHHHHHHhC--C
Confidence 4567889999988764322 233 3344432 2 12122221111 1123333 22222 567777777764 2
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
+.|.++++|+|. .++++.+++++..+.++
T Consensus 95 ~~d~vlv~~~D~P~i~~~~i~~li~~~~~~ 124 (227)
T PRK00155 95 DDDWVLVHDAARPFLTPDDIDRLIEAAEET 124 (227)
T ss_pred CCCEEEEccCccCCCCHHHHHHHHHHHhhC
Confidence 578999999995 46999999999987444
No 167
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase. This family is the short form of glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.
Probab=67.28 E-value=1.1e+02 Score=28.56 Aligned_cols=103 Identities=17% Similarity=0.101 Sum_probs=55.4
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccH
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGA 169 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~a 169 (526)
.|+. ++|.- ..+.++.+|+++.+.... + +++|......+. +.+ ........+.++.+.. .....|-+++
T Consensus 21 ~pK~--llpv~-~~pli~~~l~~l~~~gi~--~-i~vv~~~~~~~~---~~~-~l~~~~~~~~~i~~~~-~~~~~G~~~a 89 (240)
T cd02538 21 VSKQ--LLPVY-DKPMIYYPLSTLMLAGIR--E-ILIISTPEDLPL---FKE-LLGDGSDLGIRITYAV-QPKPGGLAQA 89 (240)
T ss_pred CCce--eeEEC-CEEhHHHHHHHHHHCCCC--E-EEEEeCcchHHH---HHH-HHhcccccCceEEEee-CCCCCCHHHH
Confidence 4544 34554 457889999988865432 2 333443221111 222 2111111134555553 3333457888
Q ss_pred HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 170 LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 170 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
+..+.+.. +.|-++++.+|....+..+.+++...
T Consensus 90 l~~a~~~~---~~~~~lv~~gD~~~~~~~~~~~~~~~ 123 (240)
T cd02538 90 FIIGEEFI---GDDPVCLILGDNIFYGQGLSPILQRA 123 (240)
T ss_pred HHHHHHhc---CCCCEEEEECCEEEccHHHHHHHHHH
Confidence 88888776 44555666888766555567777654
No 168
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=66.60 E-value=70 Score=33.35 Aligned_cols=101 Identities=13% Similarity=0.102 Sum_probs=57.8
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhh
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKH 176 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~ 176 (526)
+|. +..+.++.+++++.+.. .+++ ++|.....+ . + ++... ..++.++..+.. .|-++++..+++.
T Consensus 28 ~~i-~gkpli~~~l~~l~~~~--~~~i-ivv~~~~~~-~---i-~~~~~-----~~~~~~v~~~~~-~Gt~~al~~a~~~ 92 (456)
T PRK14356 28 QTL-LGEPMLRFVYRALRPLF--GDNV-WTVVGHRAD-M---V-RAAFP-----DEDARFVLQEQQ-LGTGHALQCAWPS 92 (456)
T ss_pred ccc-CCCcHHHHHHHHHHhcC--CCcE-EEEECCCHH-H---H-HHhcc-----ccCceEEEcCCC-CCcHHHHHHHHHH
Confidence 444 34677888888886643 1233 334433222 1 1 11111 124455533333 3467778777766
Q ss_pred hcccCCcEEEEecCCC-CCChHHHHHHHhhhhcCCCEE
Q 009761 177 SYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHNPDIA 213 (526)
Q Consensus 177 a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~ 213 (526)
....+.|.++++++|. .++++.+++++... .+.++.
T Consensus 93 l~~~~~d~vlv~~gD~P~i~~~~i~~li~~~-~~~~~~ 129 (456)
T PRK14356 93 LTAAGLDRVLVVNGDTPLVTTDTIDDFLKEA-AGADLA 129 (456)
T ss_pred HhhcCCCcEEEEeCCcccCCHHHHHHHHHHH-hcCCEE
Confidence 5212468999999998 67899999998875 333433
No 169
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=66.16 E-value=21 Score=37.10 Aligned_cols=109 Identities=14% Similarity=0.138 Sum_probs=64.6
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcC-CCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCC
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDD-STDPTIKDLVELECQRWASKGINIKYEIRDSRNGYK 166 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~-s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K 166 (526)
......+.++-+||.-+.+...+....+ -|+-+.+++|=++ ...+..+ ..+.. -...+++... |
T Consensus 440 ~~~qgFTlim~TYdR~d~L~k~v~~ys~--vPsL~kIlVVWNnq~k~PP~e-s~~~~------~~VPlr~r~q------k 504 (691)
T KOG1022|consen 440 GHSQGFTLIMLTYDRVDLLKKLVKHYSR--VPSLKKILVVWNNQGKNPPPE-SLEPD------IAVPLRFRQQ------K 504 (691)
T ss_pred CcccceeeeeehHHHHHHHHHHHHHHhh--CCCcceEEEEecCCCCCCChh-hcccc------CCccEEEEeh------h
Confidence 3445689999999988888888877654 3554444434443 2222222 22211 1233333311 3
Q ss_pred ccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCC
Q 009761 167 AGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPD 211 (526)
Q Consensus 167 ~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~ 211 (526)
...+|.=++.--+-+.|-|+-+|+|.+.+-|.|.-..+.-++.|+
T Consensus 505 eNsLnNRF~~~peieT~AVL~IDDDIim~~ddldFgf~VWrefPD 549 (691)
T KOG1022|consen 505 ENSLNNRFEPYPEIETEAVLEIDDDIIMPCDDLDFGFEVWREFPD 549 (691)
T ss_pred hhhhhcccccCcccccceeEEecCceeeecchhHHHHHHHHhCcc
Confidence 334444333221127899999999999988888777766666676
No 170
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=65.76 E-value=42 Score=39.25 Aligned_cols=131 Identities=12% Similarity=0.059 Sum_probs=70.8
Q ss_pred CCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHH------HHHhhhhcCC----CEEEEeeEEEEecCCCcHHHHHHH
Q 009761 165 YKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLW------RTIPFLVHNP----DIALVQARWKFVNADECLMTRMQE 234 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~------~lv~~~~~~~----~v~~V~~~~~~~~~~~~~~~~~~~ 234 (526)
||..|.|.++-.. +||++-.+|+.- .++++ .+++.|++.. .+.+++.+-....++-+.+..+.+
T Consensus 1051 GKpeNQNhaiiFt---RGE~iQtIDmNQ---DnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~svssLa~fms 1124 (1679)
T KOG0916|consen 1051 GKPENQNHAIIFT---RGEAIQTIDMNQ---DNYLEEALKMRNLLQEFEELHLGIRPPTILGAREHIFTGSVSSLAWFMS 1124 (1679)
T ss_pred CCCcccCceeeee---cchhhheecccc---hHHHHHHHHHHHHHHHHHhhcCCCCCCceeeehhheecCCchHHHHHHc
Confidence 7999999999988 999999999862 24444 3455664433 344555554444433333333222
Q ss_pred HhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCC----CCccchHHHHHHHHhCCCeEEEec
Q 009761 235 MSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKD----RTTVEDMDLAVRASLKGWKFVYVG 301 (526)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~----~~~~ED~~l~~rl~~~G~~~~~~~ 301 (526)
..-..+-...++.-...+++-.--|+--++.|=..-.-||-.. -++.||..-++....+|.++..+.
T Consensus 1125 ~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~drif~~TRGGvSKAsk~inlsEDIfAG~n~tlRgG~itH~E 1195 (1679)
T KOG0916|consen 1125 GQEQSFVTLGQRTLANPGGVRLHYGHPDVFDRIFHITRGGVSKASKGINLSEDIFAGFNATLRGGNITHHE 1195 (1679)
T ss_pred cCccchhhHHHHHhccccceeeecCCCcHhhhhhhhccccchHhhcccccchHhhhhhhHHhhCCCcccce
Confidence 1111111111211111111000114444444433333355544 248899999999999998887665
No 171
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=64.62 E-value=55 Score=29.97 Aligned_cols=98 Identities=17% Similarity=0.154 Sum_probs=52.9
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|..|. ..++.+++++.+.... +++| +.... .+.. ++...+....+.++.+.......| -++++..+.+
T Consensus 23 ll~~~g~-pli~~~l~~l~~~~~~--~iiv-v~~~~-~~~i----~~~~~~~~~~~~~i~~~~~~~~~g-~~~~l~~~~~ 92 (220)
T cd06426 23 MLKVGGK-PILETIIDRFIAQGFR--NFYI-SVNYL-AEMI----EDYFGDGSKFGVNISYVREDKPLG-TAGALSLLPE 92 (220)
T ss_pred cCeECCc-chHHHHHHHHHHCCCc--EEEE-ECccC-HHHH----HHHHCCccccCccEEEEECCCCCc-chHHHHHHHh
Confidence 4666665 6899999999876443 3333 44332 2111 121111111134555553333333 5677654433
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhhhc
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH 208 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 208 (526)
. ..|.++++.+|.+.+.+ +.+++..+.+
T Consensus 93 -~---~~~~~lv~~~D~i~~~~-~~~l~~~~~~ 120 (220)
T cd06426 93 -K---PTDPFLVMNGDILTNLN-YEHLLDFHKE 120 (220)
T ss_pred -h---CCCCEEEEcCCEeeccC-HHHHHHHHHh
Confidence 2 36778888999866554 5677776643
No 172
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=64.51 E-value=12 Score=34.23 Aligned_cols=36 Identities=8% Similarity=-0.045 Sum_probs=24.3
Q ss_pred ccHHHHHhhhhc---c-cCCcEEEEecCCCCCChHHHHHH
Q 009761 167 AGALKEGMKHSY---V-KQCDYVAIFDADFEPEPDFLWRT 202 (526)
Q Consensus 167 ~~aln~gl~~a~---~-~~~d~v~~lDaD~~~~pd~L~~l 202 (526)
...+|.|++... . ...-+|.|.|+|...+...++++
T Consensus 59 ~~qRn~AL~~ir~~~~~~~~GVVyFaDDdNtYdl~LF~em 98 (207)
T PF03360_consen 59 VHQRNAALRWIRNNANHRLDGVVYFADDDNTYDLRLFDEM 98 (207)
T ss_dssp HHHHHHHHHHHHSTTTSSS-EEEEE--TTSEE-HHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCCCcEEEECCCCCeeeHHHHHHH
Confidence 447899998774 2 23457889999999999888874
No 173
>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase. Members of this family are the enzyme glucose-1-phosphate cytidylyltransferase, also called CDP-glucose pyrophosphorylase, the product of the rfbF gene.
Probab=64.44 E-value=1e+02 Score=29.23 Aligned_cols=144 Identities=16% Similarity=0.061 Sum_probs=68.2
Q ss_pred CCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhh-hcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhh
Q 009761 164 GYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL-VHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFT 242 (526)
Q Consensus 164 g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~-~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (526)
.|-++++..+.+.. +.|.++++++|.+.+.| +.+++... +.+.++.++.. .+. .. ... +..+.. .
T Consensus 103 ~gt~~al~~~~~~i---~~e~flv~~gD~i~~~d-l~~~~~~h~~~~~d~tl~~~----~~~-~~-yG~---v~~d~~-~ 168 (254)
T TIGR02623 103 TQTGGRLKRVREYL---DDEAFCFTYGDGVADID-IKALIAFHRKHGKKATVTAV----QPP-GR-FGA---LDLEGE-Q 168 (254)
T ss_pred CCcHHHHHHHHHhc---CCCeEEEEeCCeEecCC-HHHHHHHHHHcCCCEEEEEe----cCC-Cc-ccE---EEECCC-e
Confidence 34678888888776 55677799999877655 44555543 22333333221 111 10 000 011100 0
Q ss_pred hhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccccccCCcChHHHHHHHHh
Q 009761 243 VEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHR 322 (526)
Q Consensus 243 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~R 322 (526)
+..............+....+++++.++.+. +.......|+-..+..+|.-..|.-+ .+-..-.|..++..-+.+
T Consensus 169 V~~~~Ekp~~~~~~i~~Giyi~~~~il~~l~---~~~~~~~~d~i~~l~~~~~v~~~~~~--g~w~dIgt~~~~~~~~~~ 243 (254)
T TIGR02623 169 VTSFQEKPLGDGGWINGGFFVLNPSVLDLID---GDATVWEQEPLETLAQRGELSAYEHS--GFWQPMDTLRDKNYLEEL 243 (254)
T ss_pred EEEEEeCCCCCCCeEEEEEEEEcHHHHhhcc---ccCchhhhhHHHHHHhCCCEEEEeCC--CEEecCCchHHHHHHHHH
Confidence 1000011000001134557899999987652 21111223555666677743333222 222223455666666666
Q ss_pred hhcc
Q 009761 323 WSCG 326 (526)
Q Consensus 323 W~~G 326 (526)
|..|
T Consensus 244 ~~~~ 247 (254)
T TIGR02623 244 WESG 247 (254)
T ss_pred HHcC
Confidence 7666
No 174
>TIGR03552 F420_cofC 2-phospho-L-lactate guanylyltransferase CofC. Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis.
Probab=63.11 E-value=1.1e+02 Score=27.57 Aligned_cols=52 Identities=17% Similarity=0.063 Sum_probs=37.4
Q ss_pred cEEEEeeCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCC-CChHHHHHHHhhhh
Q 009761 153 NIKYEIRDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFE-PEPDFLWRTIPFLV 207 (526)
Q Consensus 153 ~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~ 207 (526)
++.++.... .|...++..|++... .+++.++++-+|.- ++++.+++++..++
T Consensus 65 ~v~~i~~~~--~G~~~si~~al~~~~-~~~~~vlv~~~D~P~l~~~~i~~l~~~~~ 117 (195)
T TIGR03552 65 GAPVLRDPG--PGLNNALNAALAEAR-EPGGAVLILMADLPLLTPRELKRLLAAAT 117 (195)
T ss_pred CCEEEecCC--CCHHHHHHHHHHHhh-ccCCeEEEEeCCCCCCCHHHHHHHHHhcc
Confidence 445553332 257888888888752 24579999999965 69999999998773
No 175
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2. N-terminal domain of gamma subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit gamma shares sequence similarity with epsilon subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=63.07 E-value=75 Score=29.18 Aligned_cols=99 Identities=10% Similarity=0.106 Sum_probs=52.9
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhh--cc-CCcEEEEeeCCCCCCCccHHHH
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWA--SK-GINIKYEIRDSRNGYKAGALKE 172 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~--~~-~~~v~~~~~~~~~g~K~~aln~ 172 (526)
++|.-|. +.+..+++.+.+... .+++| |......+ .++...+++. .. +..+.+. ......|-++++..
T Consensus 25 Llpv~g~-pli~~~l~~l~~~g~--~~iiv-v~~~~~~~----~i~~~l~~~~~~~~~~~~~~~~-~~~~~~gt~~al~~ 95 (214)
T cd04198 25 LLPVANK-PMIWYPLDWLEKAGF--EDVIV-VVPEEEQA----EISTYLRSFPLNLKQKLDEVTI-VLDEDMGTADSLRH 95 (214)
T ss_pred cCEECCe-eHHHHHHHHHHHCCC--CeEEE-EECHHHHH----HHHHHHHhcccccCcceeEEEe-cCCCCcChHHHHHH
Confidence 5677665 888899999887532 23333 44321111 2222222210 11 1122233 33344457888888
Q ss_pred HhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhc
Q 009761 173 GMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH 208 (526)
Q Consensus 173 gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 208 (526)
+.+.. +.+ ++++.+|.+.+.+ +..++..+.+
T Consensus 96 ~~~~i---~~d-~lv~~~D~i~~~~-l~~~l~~h~~ 126 (214)
T cd04198 96 IRKKI---KKD-FLVLSCDLITDLP-LIELVDLHRS 126 (214)
T ss_pred HHhhc---CCC-EEEEeCccccccC-HHHHHHHHhc
Confidence 88765 444 7778899665544 5566665533
No 176
>KOG3917 consensus Beta-1,4-galactosyltransferase B4GALT7/SQV-3 [Carbohydrate transport and metabolism]
Probab=62.25 E-value=25 Score=32.19 Aligned_cols=148 Identities=20% Similarity=0.350 Sum_probs=85.6
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHH----cCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCC
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAAC----GLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRN 163 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~ 163 (526)
..+-+.+|++|-+..-+.+.+-+..+. +|+-. -.|+|.+.- |+ .++
T Consensus 71 aS~HklavlVPfRdRfEELl~FvPHM~~FL~rq~v~---HHI~vlNQv-D~-------------------fRF------- 120 (310)
T KOG3917|consen 71 ASYHKLAVLVPFRDRFEELLEFVPHMSKFLHRQNVS---HHILVLNQV-DP-------------------FRF------- 120 (310)
T ss_pred ccceeEEEEechHHHHHHHHHhhHHHHHHHhhcCcc---eEEEEeecc-Cc-------------------cee-------
Confidence 356789999998877655444443322 34332 234444331 10 111
Q ss_pred CCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhh
Q 009761 164 GYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTV 243 (526)
Q Consensus 164 g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (526)
..+.-+|.|+..|. +.+||++.-|.|-.|-.+-+. . +-|..+ |+.....+.-. . .+++.
T Consensus 121 -NRAsLINVGf~eas-~~~DYiaMhDVDLLPlN~el~-----Y-~fP~~~---gp~HiasP~lH--P-------kYHY~- 179 (310)
T KOG3917|consen 121 -NRASLINVGFNEAS-RLCDYIAMHDVDLLPLNPELP-----Y-DFPGIG---GPRHIASPQLH--P-------KYHYE- 179 (310)
T ss_pred -chhhheecchhhhc-chhceeeecccccccCCCCCC-----C-CCCccC---CcccccCcccC--c-------hhhhh-
Confidence 14555677887763 258999999999887443221 1 223222 22222111100 0 11110
Q ss_pred hhhccccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEE
Q 009761 244 EQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFV 298 (526)
Q Consensus 244 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~ 298 (526)
.+.|.-.+.+++-++...|..... .-||-|+-.|+...|.+..
T Consensus 180 ------------~fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLqlt 225 (310)
T KOG3917|consen 180 ------------KFVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQLT 225 (310)
T ss_pred ------------hhcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceEe
Confidence 145888999999999998887644 5699999999999987654
No 177
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=61.95 E-value=96 Score=32.21 Aligned_cols=94 Identities=14% Similarity=0.029 Sum_probs=57.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-+. +.++.+|+++.+.. +++.| +.+. .++. +.+ .. +..+.+...+.. .|.++++..+.+
T Consensus 22 l~~v~gk-pli~~~l~~l~~~~---~~i~v-v~~~-~~~~---i~~-~~------~~~~~~~~~~~~-~g~~~ai~~a~~ 84 (448)
T PRK14357 22 LHKISGK-PMINWVIDTAKKVA---QKVGV-VLGH-EAEL---VKK-LL------PEWVKIFLQEEQ-LGTAHAVMCARD 84 (448)
T ss_pred eeEECCe-eHHHHHHHHHHhcC---CcEEE-EeCC-CHHH---HHH-hc------ccccEEEecCCC-CChHHHHHHHHH
Confidence 5666665 88999999888752 34433 4432 1211 221 11 112344433333 347888888887
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhhhc
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVH 208 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 208 (526)
... +.|.++++++|. ...++.+++++..+++
T Consensus 85 ~l~--~~~~vlv~~gD~p~i~~~~i~~l~~~~~~ 116 (448)
T PRK14357 85 FIE--PGDDLLILYGDVPLISENTLKRLIEEHNR 116 (448)
T ss_pred hcC--cCCeEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 761 358999999997 5688888999887643
No 178
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate []. The isoprenoid pathway is a well known target for anti-infective drug development [, ].; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process; PDB: 1VGW_F 1VGZ_A 1W77_A 2YC3_A 2YCM_A 2YC5_A 1VGU_A 3N9W_B 1I52_A 1H3M_B ....
Probab=61.92 E-value=1e+02 Score=28.71 Aligned_cols=168 Identities=20% Similarity=0.166 Sum_probs=85.8
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.+..+++++.+...- ..+|+|+....-+..+.+.+ + .++.++ . .... .......|++... .
T Consensus 26 ~Gkpvl~~tl~~f~~~~~i--~~Ivvv~~~~~~~~~~~~~~----~-----~~v~iv-~-GG~t-R~~SV~ngL~~l~-~ 90 (221)
T PF01128_consen 26 GGKPVLEYTLEAFLASPEI--DEIVVVVPPEDIDYVEELLS----K-----KKVKIV-E-GGAT-RQESVYNGLKALA-E 90 (221)
T ss_dssp TTEEHHHHHHHHHHTTTTE--SEEEEEESGGGHHHHHHHHH----H-----TTEEEE-E---SS-HHHHHHHHHHCHH-C
T ss_pred CCeEeHHHHHHHHhcCCCC--CeEEEEecchhHHHHHHhhc----C-----CCEEEe-c-CChh-HHHHHHHHHHHHH-c
Confidence 4457899999999875433 23444554433233332332 2 355555 1 1111 3445667777752 2
Q ss_pred CCcEEEEecCC-CCCChHHHHHHHhhhhcCCCEEEEeeEE----EEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCcc
Q 009761 181 QCDYVAIFDAD-FEPEPDFLWRTIPFLVHNPDIALVQARW----KFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFF 255 (526)
Q Consensus 181 ~~d~v~~lDaD-~~~~pd~L~~lv~~~~~~~~v~~V~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (526)
+.|+|++.|+= -.++++.+.+++..+.++.+..+..-+. ...+.+.. . ....-++...
T Consensus 91 ~~d~VlIHDaaRPfv~~~~i~~~i~~~~~~~~aai~~~p~~DTik~v~~~~~-v-------------~~tldR~~l~--- 153 (221)
T PF01128_consen 91 DCDIVLIHDAARPFVSPELIDRVIEAAREGHGAAIPALPVTDTIKRVDDDGF-V-------------TETLDRSKLW--- 153 (221)
T ss_dssp TSSEEEEEETTSTT--HHHHHHHHHHHHHTCSEEEEEEE-SSEEEEESTTSB-E-------------EEEETGGGEE---
T ss_pred CCCEEEEEccccCCCCHHHHHHHHHHHHhhcCcEEEEEeccccEEEEecCCc-c-------------cccCCHHHee---
Confidence 44899999997 6779999999999885533333322221 11121110 0 0000011111
Q ss_pred cccccceeeeHHHHHHcC-CCC--CCCccchHHHHHHHHhCCCeEEEecccc
Q 009761 256 GFNGTAGVWRISALNEAG-GWK--DRTTVEDMDLAVRASLKGWKFVYVGDLK 304 (526)
Q Consensus 256 ~~~G~~~~~Rr~~l~~~g-g~~--~~~~~ED~~l~~rl~~~G~~~~~~~~~~ 304 (526)
..=+--+||.+.+.++= ... ....+||..+..++ |.++..++...
T Consensus 154 -~~QTPQ~F~~~~l~~a~~~a~~~~~~~tDdasl~~~~---g~~v~~V~G~~ 201 (221)
T PF01128_consen 154 -AVQTPQAFRFELLLEAYEKADEEGFEFTDDASLVEAA---GKKVAIVEGSP 201 (221)
T ss_dssp -EEEEEEEEEHHHHHHHHHTHHHHTHHHSSHHHHHHHT---TS-EEEEE--T
T ss_pred -eecCCCeecHHHHHHHHHHHHhcCCCccCHHHHHHHc---CCCEEEEeCCC
Confidence 22445788888877641 000 01356777665544 99998887543
No 179
>PF03213 Pox_P35: Poxvirus P35 protein; InterPro: IPR004900 The Poxvirus P35 protein is an immunodominant envelope protein. It binds to heparan sulphate on the cell surface to provide virion attachment to target cell [].; GO: 0019031 viral envelope
Probab=61.92 E-value=1.6e+02 Score=28.70 Aligned_cols=44 Identities=18% Similarity=0.297 Sum_probs=36.3
Q ss_pred cCCcEEEEecCCCCC-ChHHHHHHHhhhhcCCCEEEEeeEEEEecC
Q 009761 180 KQCDYVAIFDADFEP-EPDFLWRTIPFLVHNPDIALVQARWKFVNA 224 (526)
Q Consensus 180 ~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~ 224 (526)
+..+|++++++|..+ ++..+..++..| .+.+++++|-+-...+.
T Consensus 117 ~~~~yivVvEddnT~~~~~~l~~~I~aM-~~k~idilQLre~~~~~ 161 (325)
T PF03213_consen 117 PEDKYIVVVEDDNTLRDITTLHPIIKAM-KKKNIDILQLRETYHNS 161 (325)
T ss_pred CCCCeEEEEeCCCcccccHHHHHHHHHH-HHcCceEEEEehhhhcc
Confidence 478999999999655 778999999999 67799999988766544
No 180
>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.
Probab=61.49 E-value=94 Score=29.80 Aligned_cols=114 Identities=13% Similarity=0.049 Sum_probs=60.0
Q ss_pred EEEEE-ecCC-ChH--HHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeC--------
Q 009761 93 VLVQI-PMYN-EKE--VYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRD-------- 160 (526)
Q Consensus 93 VsViI-p~yn-e~~--~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~-------- 160 (526)
++|.+ |.|. |++ .+.+-|+.-..+. .+++.++. .+++++ ...+++.+.+. ..+.+..-+
T Consensus 3 ~~vCv~pl~~~~~~~~~l~e~ie~~~~~G--~~~~~~Y~-~~~~~~-~~~vL~~Y~~~-----g~v~~~~w~~~~~~~~~ 73 (285)
T PF01697_consen 3 FVVCVSPLFGNEDDWLQLIEWIEYHRLLG--VDHFYFYD-NSSSPS-VRKVLKEYERS-----GYVEVIPWPLRPKFPDF 73 (285)
T ss_pred EEEEccchhcccccHHHHHHHHHHHHHhC--CCEEEEEE-ccCCHH-HHHhHHHHhhc-----CeEEEEEcccccccCCc
Confidence 44555 7777 433 6777777666652 24444433 334444 45466655433 234444322
Q ss_pred -----CCC-----CCCccHHHHHhhhhcccCCcEEEEecCCCCCChHH----HHHHHhhhhcC--CCEEEEe
Q 009761 161 -----SRN-----GYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDF----LWRTIPFLVHN--PDIALVQ 216 (526)
Q Consensus 161 -----~~~-----g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~----L~~lv~~~~~~--~~v~~V~ 216 (526)
+.+ .+...+.|.++-.. ....+|++++|-|..+-|.- .+.+...+++. ..++.++
T Consensus 74 ~~~~~~~~~~~~~~~q~~a~~DCl~r~-~~~~~~v~f~DiDE~lvP~~~~~~~~~~~~~l~~~~~~~~~~~~ 144 (285)
T PF01697_consen 74 PSPFPDPNSSVERRGQIAAYNDCLLRY-RYRAKWVAFIDIDEFLVPTNAPTYPEEFEDLLREFPNISAGAYS 144 (285)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHh-hhhceEEEEeccccEEEeccccchhhHHHHHHhhccccceEEEE
Confidence 011 12355667666664 23679999999996664432 44444444332 3444444
No 181
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=61.10 E-value=1.1e+02 Score=31.87 Aligned_cols=94 Identities=13% Similarity=0.057 Sum_probs=56.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-+ .+.++++++++.+..- +++.+ +... ..+. +.+ ... ..++.++..+ +..|-++++..+.+
T Consensus 27 l~~i~g-kpli~~~i~~l~~~gi--~~i~v-v~~~-~~~~---i~~-~~~-----~~~~~~i~~~-~~~Gt~~al~~a~~ 91 (456)
T PRK09451 27 LHTLAG-KPMVQHVIDAANELGA--QHVHL-VYGH-GGDL---LKQ-TLA-----DEPLNWVLQA-EQLGTGHAMQQAAP 91 (456)
T ss_pred cceeCC-hhHHHHHHHHHHhcCC--CcEEE-EECC-CHHH---HHH-hhc-----cCCcEEEECC-CCCCcHHHHHHHHH
Confidence 455544 6688888988876542 33444 4432 1221 222 111 1245555333 33457888888887
Q ss_pred hhcccCCcEEEEecCCC-CCChHHHHHHHhhh
Q 009761 176 HSYVKQCDYVAIFDADF-EPEPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~ 206 (526)
... +.|.++++++|. .+.++.+.+++...
T Consensus 92 ~l~--~~~~vlV~~gD~P~i~~~~i~~l~~~~ 121 (456)
T PRK09451 92 FFA--DDEDILMLYGDVPLISVETLQRLRDAK 121 (456)
T ss_pred hhc--cCCcEEEEeCCcccCCHHHHHHHHHHh
Confidence 651 357899999997 56888898888754
No 182
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=60.71 E-value=97 Score=29.45 Aligned_cols=94 Identities=12% Similarity=0.111 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccCC
Q 009761 103 KEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQC 182 (526)
Q Consensus 103 ~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~ 182 (526)
.+.+..+++.+.+..-. +++ ++|+.....+ ..+...+++ +.++.+. .+..+ ..+.+-.|++... .+.
T Consensus 52 kpll~~tl~~~~~~~~i-~~I-vVV~~~~~~~----~~~~~~~~~---~~~i~~v--~gg~~-r~~SV~~gl~~l~-~~~ 118 (252)
T PLN02728 52 QPIALYSLYTFARMPEV-KEI-VVVCDPSYRD----VFEEAVENI---DVPLKFA--LPGKE-RQDSVFNGLQEVD-ANS 118 (252)
T ss_pred eEHHHHHHHHHHhCCCC-CeE-EEEeCHHHHH----HHHHHHHhc---CCceEEc--CCCCc-hHHHHHHHHHhcc-CCC
Confidence 45788888888764222 233 3344332111 122222222 2334433 22222 3566777887651 246
Q ss_pred cEEEEecCC-CCCChHHHHHHHhhhhcC
Q 009761 183 DYVAIFDAD-FEPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 183 d~v~~lDaD-~~~~pd~L~~lv~~~~~~ 209 (526)
++|++.|+| -.++++.+.+++....++
T Consensus 119 ~~VlihDaarP~vs~~~i~~li~~~~~~ 146 (252)
T PLN02728 119 ELVCIHDSARPLVTSADIEKVLKDAAVH 146 (252)
T ss_pred CEEEEecCcCCCCCHHHHHHHHHHHhhC
Confidence 899999997 677999999999877433
No 183
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=58.33 E-value=1.9e+02 Score=28.35 Aligned_cols=118 Identities=14% Similarity=0.061 Sum_probs=55.2
Q ss_pred EEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCC--cEEEEeeCCCC--C----
Q 009761 93 VLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGI--NIKYEIRDSRN--G---- 164 (526)
Q Consensus 93 VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~--~v~~~~~~~~~--g---- 164 (526)
++|+..-.+ .+.+..+|.|++..+.-.-++.| +.|+..++..++..++....+. ... .+..+.-+... +
T Consensus 3 ~~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi-~~d~~~~~~~~~~l~~~~~~~~-~~i~~~i~~I~~P~~~~~~ws~l 79 (304)
T cd06430 3 LAVVACGER-LEETLTMLKSAIVFSQKPLRFHI-FAEDQLKQSFKEKLDDWPELID-RKFNYTLHPITFPSGNAAEWKKL 79 (304)
T ss_pred EEEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEE-EECCccCHHHHHHHHHHHHhcc-ceeeeEEEEEecCccchhhhhhc
Confidence 566666666 46778888888765532334444 4455344444434444422210 111 22223212111 1
Q ss_pred CCccHHH-HHhhhhcccCCcEEEEecCCCCCChH--HHHHHHhhhhcCCCEEEE
Q 009761 165 YKAGALK-EGMKHSYVKQCDYVAIFDADFEPEPD--FLWRTIPFLVHNPDIALV 215 (526)
Q Consensus 165 ~K~~aln-~gl~~a~~~~~d~v~~lDaD~~~~pd--~L~~lv~~~~~~~~v~~V 215 (526)
.|..+-- ..+.... ++-|-++.+|+|.+...| -|-++...| .+..++++
T Consensus 80 ~~~~~y~RL~ip~lL-p~~dkvLYLD~Dii~~~dI~eL~~~~~df-~~~~~aA~ 131 (304)
T cd06430 80 FKPCAAQRLFLPSLL-PDVDSLLYVDTDILFLRPVEEIWSFLKKF-NSTQLAAM 131 (304)
T ss_pred ccHHHHHHHHHHHHh-hhhceEEEeccceeecCCHHHHHHHHhhc-CCCeEEEE
Confidence 1111111 1122221 356899999999888544 333333344 34345554
No 184
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase. Members of this protein family are 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, the IspD protein of the deoxyxylulose pathway of IPP biosynthesis. In about twenty percent of bacterial genomes, this protein occurs as IspDF, a bifunctional fusion protein.
Probab=57.58 E-value=1.1e+02 Score=27.96 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=54.0
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.++.+++.+.+.... +++ ++|.++...+. +.+.. .. ...+.++ .+..+ ...++..|++.. +
T Consensus 25 ~gkpll~~~l~~l~~~~~~-~~i-vVv~~~~~~~~---~~~~~-~~----~~~~~~~--~~~~~-~~~sl~~~l~~~--~ 89 (217)
T TIGR00453 25 GGRPLLEHTLDAFLAHPAI-DEV-VVVVSPEDQEF---FQKYL-VA----RAVPKIV--AGGDT-RQDSVRNGLKAL--K 89 (217)
T ss_pred CCeEHHHHHHHHHhcCCCC-CEE-EEEEChHHHHH---HHHHh-hc----CCcEEEe--CCCch-HHHHHHHHHHhC--C
Confidence 4568899999998865222 233 33444321111 11111 11 1123333 11112 345677777764 1
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
+.|+++++|+|. .++++.+++++..+.++
T Consensus 90 ~~d~vlv~~~D~P~i~~~~i~~li~~~~~~ 119 (217)
T TIGR00453 90 DAEWVLVHDAARPFVPKELLDRLLEALRKA 119 (217)
T ss_pred CCCEEEEccCccCCCCHHHHHHHHHHHhhC
Confidence 478999999996 57999999999987544
No 185
>PF02348 CTP_transf_3: Cytidylyltransferase; InterPro: IPR003329 Synonym(s): CMP-N-acetylneuraminic acid synthetase Acylneuraminate cytidylyltransferase (2.7.7.43 from EC) (CMP-NeuAc synthetase) catalyzes the reaction of CTP and NeuAc to form CMP-NeuAc, which is the nucleotide sugar donor used by sialyltransferases []. The outer membrane lipooligosaccharides of some microorganisms contain terminal sialic acid attached to N-acetyllactosamine and so this modification may be important in pathogenesis.; GO: 0009103 lipopolysaccharide biosynthetic process; PDB: 3K8D_C 1VH1_B 3K8E_C 1QWJ_A 3EWI_A 1VIC_B 3DUV_A 1VH3_C 3TQD_A 2Y6P_C ....
Probab=57.10 E-value=93 Score=28.41 Aligned_cols=93 Identities=23% Similarity=0.265 Sum_probs=54.0
Q ss_pred ChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccC
Q 009761 102 EKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQ 181 (526)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~ 181 (526)
..+.+..+++.+.+....+ + |+|.-| |+.....++ ++ +..+ ..+++....-......+++.. .
T Consensus 23 gkpLi~~~i~~a~~s~~~d-~--IvVaTd--~~~i~~~~~----~~---g~~v--~~~~~~~~~~~~r~~~~~~~~---~ 85 (217)
T PF02348_consen 23 GKPLIEYVIERAKQSKLID-E--IVVATD--DEEIDDIAE----EY---GAKV--IFRRGSLADDTDRFIEAIKHF---L 85 (217)
T ss_dssp TEEHHHHHHHHHHHTTTTS-E--EEEEES--SHHHHHHHH----HT---TSEE--EE--TTSSSHHHHHHHHHHHH---T
T ss_pred CccHHHHHHHHHHhCCCCC-e--EEEeCC--CHHHHHHHH----Hc---CCee--EEcChhhcCCcccHHHHHHHh---h
Confidence 3468999999998876653 2 435444 222232333 22 4334 333333222333445566665 4
Q ss_pred Cc---EEEEecCCCCC-ChHHHHHHHhhhhcCCC
Q 009761 182 CD---YVAIFDADFEP-EPDFLWRTIPFLVHNPD 211 (526)
Q Consensus 182 ~d---~v~~lDaD~~~-~pd~L~~lv~~~~~~~~ 211 (526)
.+ +++.+.+|+-+ +|+.+.+++..+.+++.
T Consensus 86 ~~~~~~vv~~~~d~Pll~~~~i~~~i~~~~~~~~ 119 (217)
T PF02348_consen 86 ADDEDIVVRLQGDSPLLDPTSIDRAIEDIREANE 119 (217)
T ss_dssp CSTTSEEEEESTTETT--HHHHHHHHHHHHHSTT
T ss_pred hhHHhhccccCCeeeECCHHHHHHHHHHHhcCch
Confidence 45 99999999555 99999999988866553
No 186
>PF10138 vWA-TerF-like: vWA found in TerF C terminus ; InterPro: IPR019303 This entry represents the N-terminal domain of a family of proteins that confer resistance to the metalloid element tellurium and its salts.
Probab=56.28 E-value=1.1e+02 Score=28.02 Aligned_cols=101 Identities=15% Similarity=0.095 Sum_probs=49.0
Q ss_pred CChHHHHHHHHHHH---cCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhh
Q 009761 101 NEKEVYQLSIGAAC---GLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHS 177 (526)
Q Consensus 101 ne~~~l~~~L~sl~---~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a 177 (526)
|+..++++.++... ..+.| .+++++.||..++..+ +.+.+++. ...+.-...+.-.+.+-+--..|.. ++-.
T Consensus 84 ~y~~vm~~v~~~y~~~~~~~~P--~~VlFiTDG~~~~~~~-~~~~i~~a-s~~pifwqFVgiG~~~f~fL~kLD~-l~gR 158 (200)
T PF10138_consen 84 NYAPVMEDVLDHYFKREPSDAP--ALVLFITDGGPDDRRA-IEKLIREA-SDEPIFWQFVGIGDSNFGFLEKLDD-LAGR 158 (200)
T ss_pred chHHHHHHHHHHHhhcCCCCCC--eEEEEEecCCccchHH-HHHHHHhc-cCCCeeEEEEEecCCcchHHHHhhc-cCCc
Confidence 55578888888887 33455 3788889986654422 22222222 2223333344222221111111111 1111
Q ss_pred cccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 178 YVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 178 ~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
..++..++.+=|-|.+.+...-++++..|
T Consensus 159 ~vDNa~Ff~~~d~~~lsD~eLy~~LL~Ef 187 (200)
T PF10138_consen 159 VVDNAGFFAIDDIDELSDEELYDRLLAEF 187 (200)
T ss_pred ccCCcCeEecCCcccCCHHHHHHHHHHHH
Confidence 11355666666666555666666666655
No 187
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=55.87 E-value=1.6e+02 Score=27.75 Aligned_cols=113 Identities=12% Similarity=0.017 Sum_probs=53.5
Q ss_pred EEEecCCCh--HHHHHHHHHHHcCCCCCCceEEEEE-cCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC-C-----
Q 009761 95 VQIPMYNEK--EVYQLSIGAACGLSWPSDRITIQVL-DDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNG-Y----- 165 (526)
Q Consensus 95 ViIp~yne~--~~l~~~L~sl~~q~yp~~~~~I~V~-D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g-~----- 165 (526)
|++.+-++. ..+.-++.|++..+-. .+.++|. |+-+++..+ ..+...+. .+..+.++..+.... .
T Consensus 3 i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~-~L~~~~~~---~~~~i~~~~~~~~~~~~~~~~~ 76 (246)
T cd00505 3 IVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKA-ALDNLRKL---YNFNYELIPVDILDSVDSEHLK 76 (246)
T ss_pred EEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHH-HHHHHHhc---cCceEEEEeccccCcchhhhhc
Confidence 444455433 7788899999876533 2334444 554444333 33333222 134454443321110 0
Q ss_pred Cc---cH-HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEE
Q 009761 166 KA---GA-LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALV 215 (526)
Q Consensus 166 K~---~a-ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V 215 (526)
+. .+ ....+.... ++.|=|+.+|+|.++..| +.++...-.++..+++|
T Consensus 77 ~~~~~~~y~RL~i~~ll-p~~~kvlYLD~D~iv~~d-i~~L~~~~l~~~~~aav 128 (246)
T cd00505 77 RPIKIVTLTKLHLPNLV-PDYDKILYVDADILVLTD-IDELWDTPLGGQELAAA 128 (246)
T ss_pred CccccceeHHHHHHHHh-hccCeEEEEcCCeeeccC-HHHHhhccCCCCeEEEc
Confidence 11 01 111111111 258899999999988644 44444332133445554
No 188
>KOG2791 consensus N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=54.28 E-value=75 Score=31.17 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=34.1
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHH
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVE 141 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~ 141 (526)
-++-+++-++|.++.++-+++|+.+..=-.+.+ +++..|..-+...++++
T Consensus 117 ~~~vlV~qVHnRp~Ylr~lveSlrk~kGI~~tL-lifSHD~~~~eiN~~I~ 166 (455)
T KOG2791|consen 117 DRVVLVLQVHNRPQYLRVLVESLRKVKGISETL-LIFSHDGYFEEINRIIE 166 (455)
T ss_pred ceEEEEEEEcCcHHHHHHHHHHHHhccCccceE-EEEeccchHHHHHHHHh
Confidence 357888999999999999999998754333333 33665544444444554
No 189
>PHA02688 ORF059 IMV protein VP55; Provisional
Probab=53.13 E-value=1.4e+02 Score=29.06 Aligned_cols=43 Identities=19% Similarity=0.292 Sum_probs=34.4
Q ss_pred CCcEEEEecCCCCC-ChHHHHHHHhhhhcCCCEEEEeeEEEEecC
Q 009761 181 QCDYVAIFDADFEP-EPDFLWRTIPFLVHNPDIALVQARWKFVNA 224 (526)
Q Consensus 181 ~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~ 224 (526)
..+|++++++|..+ ++..+..++..| .+.+++++|-+-...+.
T Consensus 116 ~~~yivVlEDDnTi~~~~~~~~~I~~M-~~n~idilQLre~~~~~ 159 (323)
T PHA02688 116 EDEYIVVVEDDNTLRDITTLHPIIKAM-KEKNIDILQLRETLHNN 159 (323)
T ss_pred CCCeEEEEcCCCcccccHHHHHHHHHH-HhcCeEEEEeehhhhCC
Confidence 68999999999666 678888999998 56679999987554443
No 190
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form. Alternate name: dTDP-D-glucose synthase
Probab=53.08 E-value=98 Score=30.97 Aligned_cols=98 Identities=19% Similarity=0.115 Sum_probs=54.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.-+. +.+..+++++.+... +++.| +......+..+ +...+....+.++.++..... .|.++++..+.+
T Consensus 24 l~pv~g~-pli~~~l~~l~~~gi--~~i~v-v~~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~~-~G~~~al~~a~~ 94 (353)
T TIGR01208 24 LIPVANK-PILQYAIEDLAEAGI--TDIGI-VVGPVTGEEIK----EIVGEGERFGAKITYIVQGEP-LGLAHAVYTARD 94 (353)
T ss_pred ccEECCE-eHHHHHHHHHHHCCC--CEEEE-EeCCCCHHHHH----HHHhcccccCceEEEEECCCC-CCHHHHHHHHHH
Confidence 3566565 889999999987642 23333 44331222222 222211111345556543333 447888888888
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
.. +.|-++++.+|...+. .+.+++..+
T Consensus 95 ~l---~~~~~li~~gD~~~~~-~l~~l~~~~ 121 (353)
T TIGR01208 95 FL---GDDDFVVYLGDNLIQD-GISRFVKSF 121 (353)
T ss_pred hc---CCCCEEEEECCeecCc-cHHHHHHHH
Confidence 76 3334556679987764 456777655
No 191
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]
Probab=52.44 E-value=1.2e+02 Score=30.62 Aligned_cols=100 Identities=19% Similarity=0.246 Sum_probs=65.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|+-| .+.++..|+++.++... +++++-+... + .+++...+....+.++.|.....+.| -++++-.+.+
T Consensus 26 llpI~g-kPii~~~l~~L~~~Gv~----eivi~~~y~~---~-~i~~~~~d~~~~~~~I~y~~e~~~lG-Tag~l~~a~~ 95 (358)
T COG1208 26 LLPIAG-KPLIEYVLEALAAAGVE----EIVLVVGYLG---E-QIEEYFGDGEGLGVRITYVVEKEPLG-TAGALKNALD 95 (358)
T ss_pred cceeCC-ccHHHHHHHHHHHCCCc----EEEEEeccch---H-HHHHHHhcccccCCceEEEecCCcCc-cHHHHHHHHH
Confidence 456664 45788888888876542 2334433222 2 22222222122367888886555555 8999999999
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhhhcC
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~ 209 (526)
.. ..|-++++..|...+-| +.+++...+++
T Consensus 96 ~l---~~~~f~v~~GDv~~~~d-l~~l~~~~~~~ 125 (358)
T COG1208 96 LL---GGDDFLVLNGDVLTDLD-LSELLEFHKKK 125 (358)
T ss_pred hc---CCCcEEEEECCeeeccC-HHHHHHHHHhc
Confidence 87 66889999999999988 88888876544
No 192
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.
Probab=50.76 E-value=1.5e+02 Score=28.15 Aligned_cols=104 Identities=15% Similarity=0.062 Sum_probs=57.7
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHH-----HHHHHhh-----------ccCCcEEEEee
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVE-----LECQRWA-----------SKGINIKYEIR 159 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~-----~~~~~~~-----------~~~~~v~~~~~ 159 (526)
++|+-+. +.+..+++++.+.... ++.| +.....+.-.+.+.+ ....+.. ..+.++.+...
T Consensus 25 llpv~gk-pli~~~l~~l~~~gi~--~i~i-v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 100 (267)
T cd02541 25 MLPIVDK-PVIQYIVEEAVAAGIE--DIII-VTGRGKRAIEDHFDRSYELEETLEKKGKTDLLEEVRIISDLANIHYVRQ 100 (267)
T ss_pred eeEECCE-EHHHHHHHHHHHCCCC--EEEE-EeCCchHHHHHHhCCcHHHHHHHHhcccHHHhhhhhcccCCceEEEEEc
Confidence 5677665 8999999999876432 3333 444322211111100 0000000 00234555533
Q ss_pred CCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCCh-H-HHHHHHhhhh
Q 009761 160 DSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEP-D-FLWRTIPFLV 207 (526)
Q Consensus 160 ~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~p-d-~L~~lv~~~~ 207 (526)
+... |-++++..+.+.. +.+-++++.+|..... + .+.+++....
T Consensus 101 ~~~~-Gt~~al~~~~~~i---~~~~~lv~~gD~~~~~~~~~~~~l~~~~~ 146 (267)
T cd02541 101 KEPL-GLGHAVLCAKPFI---GDEPFAVLLGDDLIDSKEPCLKQLIEAYE 146 (267)
T ss_pred CCCC-ChHHHHHHHHHHh---CCCceEEEECCeEEeCCchHHHHHHHHHH
Confidence 3334 4889999998877 5466777788876654 2 6888887664
No 193
>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit. GalF is a non-catalytic subunit of the UTP-glucose pyrophosphorylase modulating the enzyme activity to increase the formation of UDP-glucose
Probab=49.55 E-value=2.1e+02 Score=27.91 Aligned_cols=108 Identities=12% Similarity=0.091 Sum_probs=59.8
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHH---------------HHHhh---cc
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELE---------------CQRWA---SK 150 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~---------------~~~~~---~~ 150 (526)
..|+. ++|+-+.+ .++..++.+.+..-. ++ ++++... .+...+..... .+... ..
T Consensus 23 ~~PKp--LvpV~gkP-iI~~vl~~l~~~Gi~--~i-vivv~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (297)
T TIGR01105 23 AIPKE--MLPIVDKP-MIQYIVDEIVAAGIK--EI-VLVTHAS-KNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPP 95 (297)
T ss_pred CCCce--eeEECCEE-HHHHHHHHHHHCCCC--EE-EEEecCC-hHHHHHHHhchHHHHHHHHHhcchhhhhhhhhcCCC
Confidence 34554 67887766 888999988876532 23 3344332 22222221100 00000 11
Q ss_pred CCcEEEEeeCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCCh-------HHHHHHHhhhh
Q 009761 151 GINIKYEIRDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEP-------DFLWRTIPFLV 207 (526)
Q Consensus 151 ~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~p-------d~L~~lv~~~~ 207 (526)
+.++.+....++ -|-++|+..+.+... +.+++++. +|++.++ -.+.+++..++
T Consensus 96 ~~~i~~~~q~~~-lGtg~Av~~a~~~l~--~~~flvv~-gD~l~~~~~~~~~~~~l~~li~~~~ 155 (297)
T TIGR01105 96 GVTIMNVRQAQP-LGLGHSILCARPVVG--DNPFVVVL-PDIIIDDATADPLRYNLAAMIARFN 155 (297)
T ss_pred CceEEEeeCCCc-CchHHHHHHHHHHhC--CCCEEEEE-CCeeccccccccchhHHHHHHHHHH
Confidence 345666644444 458999999988761 34566555 8877654 36778877653
No 194
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional
Probab=49.39 E-value=1.1e+02 Score=30.82 Aligned_cols=40 Identities=15% Similarity=0.239 Sum_probs=33.8
Q ss_pred CCccHHHHHhhhhcccCCcEEEEecCCC-CCChHHHHHHHhhhh
Q 009761 165 YKAGALKEGMKHSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLV 207 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 207 (526)
|..+++..|++.. +.|+++++++|. .++++.+++++..+.
T Consensus 79 G~~~si~~gl~~~---~~~~vlv~~~D~P~i~~~~i~~L~~~~~ 119 (366)
T PRK14489 79 GPLSGILAGLEHA---DSEYLFVVACDTPFLPENLVKRLSKALA 119 (366)
T ss_pred ChHHHHHHHHHhc---CCCcEEEeeCCcCCCCHHHHHHHHHHhh
Confidence 5677788899887 789999999995 669999999998763
No 195
>TIGR02584 cas_NE0113 CRISPR-associated protein, NE0113 family. Members of this minor CRISPR-associated (Cas) protein family are found in cas gene clusters in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, Mannheimia succiniciproducens MBEL55E, and Verrucomicrobium spinosum.
Probab=46.27 E-value=2e+02 Score=26.26 Aligned_cols=41 Identities=15% Similarity=0.133 Sum_probs=26.2
Q ss_pred EEEecCCCh-HHHHHHHHHHHcCCCC--CCceEEEEEcCCCchh
Q 009761 95 VQIPMYNEK-EVYQLSIGAACGLSWP--SDRITIQVLDDSTDPT 135 (526)
Q Consensus 95 ViIp~yne~-~~l~~~L~sl~~q~yp--~~~~~I~V~D~s~D~t 135 (526)
|++.+-+.. .++.+||.++..+..| .+++.|+=..++.+..
T Consensus 1 ILvat~G~sPQVVTETLyaL~~~g~~~~pdEi~vItT~~g~~~~ 44 (209)
T TIGR02584 1 ILLCVSGMSPQIITETIYALAQESPPVVPEEIHVITTSDGKRDI 44 (209)
T ss_pred CEEEecCCCCchHHHHHHHHHhcCCCCCCCeEEEEEccCcHHHH
Confidence 345555555 7999999999998776 5665543333343333
No 196
>PLN03193 beta-1,3-galactosyltransferase; Provisional
Probab=45.82 E-value=3.5e+02 Score=27.69 Aligned_cols=117 Identities=15% Similarity=0.074 Sum_probs=64.4
Q ss_pred CCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEE---ecCCCcHHHHHHHHhhhhhhhhhhhccccCCCcccc
Q 009761 181 QCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKF---VNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGF 257 (526)
Q Consensus 181 ~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (526)
+.+|++-.|+|..+..+-|.+.+..-...|+ +..|.... .+.... .. .+.+.+ . .....-..+...
T Consensus 236 dAkF~mK~DDDvfVnv~~L~~~L~~~~~~~r--lYiG~m~~gPvr~~~~~---ky--~epe~w-~---~~~~~~~YPpyA 304 (408)
T PLN03193 236 DADFYVKVDDDVHVNIATLGETLVRHRKKPR--VYIGCMKSGPVLSQKGV---RY--HEPEYW-K---FGENGNKYFRHA 304 (408)
T ss_pred CCeEEEEcCCCceEcHHHHHHHHHhcCCCCC--EEEEecccCccccCCCC---cC--cCcccc-c---ccCccccCCCCC
Confidence 7899999999999999887776653322333 22232211 111110 00 000000 0 000111233346
Q ss_pred cccceeeeHHHHHHcCCCC---CCCccchHHHHHHHHhCCCeEEEeccccccccCC
Q 009761 258 NGTAGVWRISALNEAGGWK---DRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELP 310 (526)
Q Consensus 258 ~G~~~~~Rr~~l~~~gg~~---~~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p 310 (526)
.|.+.++++++...+-.-. ...-.||..++.-+. |..+.+.++.......|
T Consensus 305 sG~gYVlS~DLa~~I~~n~~~L~~y~~EDV~vG~Wl~--~L~V~~vdd~~fcc~~~ 358 (408)
T PLN03193 305 TGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFI--GLDVEHIDDRRLCCGTP 358 (408)
T ss_pred CcceEEehHHHHHHHHhChhhhcccCcchhhhhhHhc--cCCceeeecccccCCCC
Confidence 7999999999987763111 122579999999885 55666776655443333
No 197
>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.
Probab=45.74 E-value=88 Score=29.35 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=48.4
Q ss_pred EEEEEecCC-ChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC--CCCC--Cc
Q 009761 93 VLVQIPMYN-EKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS--RNGY--KA 167 (526)
Q Consensus 93 VsViIp~yn-e~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~--~~g~--K~ 167 (526)
|+-+|-+|+ ..+.+++.++.+- .|+..+.|.|+-.+++...+++ +... ....+++++.... .-|| ..
T Consensus 1 iAylil~h~~~~~~~~~l~~~l~---~~~~~f~iHiD~k~~~~~~~~~-~~~~----~~~~nv~~v~~r~~v~WG~~S~v 72 (244)
T PF02485_consen 1 IAYLILAHKNDPEQLERLLRLLY---HPDNDFYIHIDKKSPDYFYEEI-KKLI----SCFPNVHFVPKRVDVRWGGFSLV 72 (244)
T ss_dssp EEEEEEESS--HHHHHHHHHHH-----TTSEEEEEE-TTS-HHHHHHH-HHHH----CT-TTEEE-SS-----TTSHHHH
T ss_pred CEEEEEecCCCHHHHHHHHHHhc---CCCCEEEEEEcCCCChHHHHHH-HHhc----ccCCceeecccccccccCCccHH
Confidence 456788877 6678877777664 3444444544445555444422 2222 2245776764121 2222 22
Q ss_pred cHHHHHhhhhcc--cCCcEEEEecCCCCC--ChHHHHHHHh
Q 009761 168 GALKEGMKHSYV--KQCDYVAIFDADFEP--EPDFLWRTIP 204 (526)
Q Consensus 168 ~aln~gl~~a~~--~~~d~v~~lDaD~~~--~pd~L~~lv~ 204 (526)
.|.-.+++.|.. .+.||++++..++.| +.+.+.+...
T Consensus 73 ~A~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~ 113 (244)
T PF02485_consen 73 EATLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLE 113 (244)
T ss_dssp HHHHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcEEEEcccccccccchHHHHHHHH
Confidence 333344444433 278898888888776 4555555444
No 198
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=45.57 E-value=2.8e+02 Score=27.67 Aligned_cols=118 Identities=14% Similarity=0.156 Sum_probs=59.3
Q ss_pred CcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEE-cCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC--CCC--
Q 009761 91 PMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVL-DDSTDPTIKDLVELECQRWASKGINIKYEIRDS--RNG-- 164 (526)
Q Consensus 91 P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~-D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~--~~g-- 164 (526)
..+.|+..+=+.- ..+.-++.|++..+ ++..+.+.|. |+-+++..+ ..+..++.+ +.++.+..-+. ..+
T Consensus 24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn-~~~~~~f~Il~~~is~e~~~-~l~~l~~~~---~~~i~~~~id~~~~~~~~ 98 (334)
T PRK15171 24 NSLDIAYGIDKNFLFGCGVSIASVLLNN-PDKSLVFHVFTDYISDADKQ-RFSALAKQY---NTRINIYLINCERLKSLP 98 (334)
T ss_pred CceeEEEECcHhhHHHHHHHHHHHHHhC-CCCCEEEEEEeCCCCHHHHH-HHHHHHHhc---CCeEEEEEeCHHHHhCCc
Confidence 4566666553332 78899999998653 3333555555 444555544 444555554 33444432211 000
Q ss_pred -CCccHHHHHhh----hhcccCCcEEEEecCCCCCChHHHHHHHhh-hhcCCCEEEE
Q 009761 165 -YKAGALKEGMK----HSYVKQCDYVAIFDADFEPEPDFLWRTIPF-LVHNPDIALV 215 (526)
Q Consensus 165 -~K~~aln~gl~----~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~-~~~~~~v~~V 215 (526)
.+......-.+ .....+.|-|+.+|+|.++..| |.++... + .+..+++|
T Consensus 99 ~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~d-l~~L~~~dl-~~~~~aav 153 (334)
T PRK15171 99 STKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGS-IKELIDLDF-AENEIAAV 153 (334)
T ss_pred ccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCC-HHHHHhccC-CCCeEEEE
Confidence 01111111112 1111358899999999988764 3344432 3 32344444
No 199
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=44.47 E-value=60 Score=34.02 Aligned_cols=93 Identities=17% Similarity=0.218 Sum_probs=62.6
Q ss_pred cEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHH
Q 009761 92 MVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALK 171 (526)
Q Consensus 92 ~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln 171 (526)
..+|++-+|..++++...|+.+-...|-+ + +|+|=++..|+.-+ + .|++-|+.+.+++.++++- .|+-
T Consensus 650 QFTvVmLTYERe~VLm~sLeRL~gLPYLn-K-vvVVWNspk~P~dd-l------~WPdigvPv~viR~~~NsL---NNRF 717 (907)
T KOG2264|consen 650 QFTVVMLTYEREAVLMGSLERLHGLPYLN-K-VVVVWNSPKDPPDD-L------TWPDIGVPVEVIRVAENSL---NNRF 717 (907)
T ss_pred eEEEEEEEehHHHHHHHHHHHhhCCcccc-e-EEEEeCCCCCChhc-c------cCcCCCCceEEEEcccccc---cccc
Confidence 58999999999999999999999998875 3 33244444444322 2 3566688888885444321 1212
Q ss_pred HHhhhhcccCCcEEEEecCCCCCChHHH
Q 009761 172 EGMKHSYVKQCDYVAIFDADFEPEPDFL 199 (526)
Q Consensus 172 ~gl~~a~~~~~d~v~~lDaD~~~~pd~L 199 (526)
.-.+.. ..|-|+-+|+|.-+.-|-+
T Consensus 718 lPwd~I---ETEAvLS~DDDahLrhdEI 742 (907)
T KOG2264|consen 718 LPWDRI---ETEAVLSLDDDAHLRHDEI 742 (907)
T ss_pred cCchhh---hheeeeecccchhhhhhhe
Confidence 224555 7899999999977655544
No 200
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism]
Probab=43.93 E-value=2.5e+02 Score=25.44 Aligned_cols=90 Identities=9% Similarity=0.143 Sum_probs=57.8
Q ss_pred CCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcc
Q 009761 100 YNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYV 179 (526)
Q Consensus 100 yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~ 179 (526)
.|....++..++.+..|. + . ++|+-+.+.+. .. ...+.++....+..|--.++-.|+++.
T Consensus 26 ~~g~~lie~v~~~L~~~~---~-~-vvi~~~~~~~~---~~----------~~g~~vv~D~~~~~GPL~Gi~~al~~~-- 85 (192)
T COG0746 26 LNGRPLIEHVIDRLRPQV---D-V-VVISANRNQGR---YA----------EFGLPVVPDELPGFGPLAGILAALRHF-- 85 (192)
T ss_pred eCCeEHHHHHHHHhcccC---C-E-EEEeCCCchhh---hh----------ccCCceeecCCCCCCCHHHHHHHHHhC--
Confidence 455677888888877663 2 2 32443332221 11 122445423333216788899999998
Q ss_pred cCCcEEEEecCCCCC-ChHHHHHHHhhhhcCC
Q 009761 180 KQCDYVAIFDADFEP-EPDFLWRTIPFLVHNP 210 (526)
Q Consensus 180 ~~~d~v~~lDaD~~~-~pd~L~~lv~~~~~~~ 210 (526)
++|+++++=+|.-. +++.+.++.+.+.+++
T Consensus 86 -~~~~~~v~~~D~P~i~~~lv~~l~~~~~~~~ 116 (192)
T COG0746 86 -GTEWVLVLPCDMPFIPPELVERLLSAFKQTG 116 (192)
T ss_pred -CCCeEEEEecCCCCCCHHHHHHHHHhhcccC
Confidence 89999999999554 8899999999885444
No 201
>TIGR00454 conserved hypothetical protein TIGR00454. At this time this gene appears to be present only in Archea
Probab=42.18 E-value=2e+02 Score=25.71 Aligned_cols=96 Identities=9% Similarity=0.071 Sum_probs=55.4
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhh
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKH 176 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~ 176 (526)
+|. +....+...++++.+... +++ ++|....++.+ +...+ + ....+. . ....|-...+..|++.
T Consensus 22 l~i-~GkplI~~vi~~l~~~~i--~~I-~Vv~~~~~~~~-~~~l~----~-----~~~~~~-~-~~g~G~~~~l~~al~~ 85 (183)
T TIGR00454 22 IEV-CGRCLIDHVLSPLLKSKV--NNI-IIATSPHTPKT-EEYIN----S-----AYKDYK-N-ASGKGYIEDLNECIGE 85 (183)
T ss_pred eEE-CCEEHHHHHHHHHHhCCC--CEE-EEEeCCCHHHH-HHHHh----h-----cCcEEE-e-cCCCCHHHHHHHHhhc
Confidence 444 346788888888876542 233 33444333322 21222 1 112222 2 2233356678888875
Q ss_pred hcccCCcEEEEecCCCC-CChHHHHHHHhhhhcCC
Q 009761 177 SYVKQCDYVAIFDADFE-PEPDFLWRTIPFLVHNP 210 (526)
Q Consensus 177 a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~ 210 (526)
. ...+.++++-+|.- +.++.+.+++..+.+.+
T Consensus 86 ~--~~~~~~lv~~~D~P~i~~~~i~~li~~~~~~~ 118 (183)
T TIGR00454 86 L--YFSEPFLVVSSDLINLRSKIIDSIVDYYYCIK 118 (183)
T ss_pred c--cCCCCEEEEeCCcCcCCHHHHHHHHHHHHhcC
Confidence 3 14678999999975 59999999998774443
No 202
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=42.07 E-value=3.8e+02 Score=27.01 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=27.1
Q ss_pred ccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeE
Q 009761 179 VKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQAR 218 (526)
Q Consensus 179 ~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~ 218 (526)
...+|++++-|.|.+|.|+.+..+-. ....|..-..+.+
T Consensus 176 ~~~dDliivSDvDEIP~p~~l~~Lr~-cd~~p~~l~l~lr 214 (356)
T PF04724_consen 176 IQDDDLIIVSDVDEIPSPETLKFLRW-CDGFPEPLHLRLR 214 (356)
T ss_pred CCCCCEEEEcCcccccCHHHHHHHHh-cCCCCCeeEEEee
Confidence 35899999999999999999976633 3234444333333
No 203
>PF09837 DUF2064: Uncharacterized protein conserved in bacteria (DUF2064); InterPro: IPR018641 This entry contains proteins that have no known function. ; PDB: 3CGX_A.
Probab=42.04 E-value=1.8e+02 Score=24.10 Aligned_cols=61 Identities=13% Similarity=0.211 Sum_probs=36.5
Q ss_pred CcEEEEeeCCCCCCCccHHHHHhhhhcccCCcEEEEecCCC-CCChHHHHHHHhhhhcCCCEEEEeeE
Q 009761 152 INIKYEIRDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHNPDIALVQAR 218 (526)
Q Consensus 152 ~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V~~~ 218 (526)
..+.+. .+..+.-+.-++.+++.+ ...++-|+++-+|+ .++++.|++....++ +. ++|-|+
T Consensus 33 ~~~~~~--~Q~g~dLG~Rm~~a~~~~-~~g~~~vvliGsD~P~l~~~~l~~A~~~L~-~~--d~VlgP 94 (122)
T PF09837_consen 33 SGFSFF--PQQGGDLGERMANAFQQA-ARGYEPVVLIGSDCPDLTPDDLEQAFEALQ-RH--DVVLGP 94 (122)
T ss_dssp TTSEEE--E--SSSHHHHHHHHHHHH-HTT-SEEEEE-SS-TT--HHHHHHHHHHTT-T---SEEEEE
T ss_pred CCCEEe--ecCCCCHHHHHHHHHHHH-HcCCCcEEEEcCCCCCCCHHHHHHHHHHhc-cC--CEEEee
Confidence 345555 333343555677777776 45788999999995 558999999999884 33 445554
No 204
>KOG0799 consensus Branching enzyme [Carbohydrate transport and metabolism]
Probab=41.84 E-value=3.4e+02 Score=28.21 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=62.8
Q ss_pred cEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcC-CCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHH
Q 009761 92 MVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDD-STDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGAL 170 (526)
Q Consensus 92 ~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~-s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~al 170 (526)
.+..+.-+|.+-+.+++.++++-. |+....| .+|. |+++. +...+.+.+. -.++.+.........++.++
T Consensus 104 ~~a~~~~v~kd~~~verll~aiYh---PqN~yci-hvD~~s~~~f-k~~~~~L~~c----f~NV~v~~k~~~v~~~G~s~ 174 (439)
T KOG0799|consen 104 PAAFLRVVYKDYEQVERLLQAIYH---PQNVYCI-HVDAKSPPEF-RVAMQQLASC----FPNVIVLPKRESVTYGGHSI 174 (439)
T ss_pred ceEEEEeecccHHHHHHHHHHHhC---CcCcceE-EECCCCCHHH-HHHHHHHHhc----CCceEEeccccceecCCchh
Confidence 578888999999999999988753 3334444 5554 55544 4344444443 47888875444433334444
Q ss_pred HHH----hhhhcc--cCCcEEEEecCCCCC--ChHHHHHHHhhh
Q 009761 171 KEG----MKHSYV--KQCDYVAIFDADFEP--EPDFLWRTIPFL 206 (526)
Q Consensus 171 n~g----l~~a~~--~~~d~v~~lDaD~~~--~pd~L~~lv~~~ 206 (526)
+.+ ++.... .+-||++.+-+.+.| ..+.+.+....+
T Consensus 175 l~a~l~c~~~Ll~~~~~W~yfinLs~~D~PlkT~~elv~i~~~L 218 (439)
T KOG0799|consen 175 LAAHLNCLADLLKLSGDWDYFINLSNSDYPLKTNDELVRIFKIL 218 (439)
T ss_pred hHHHHHHHHHHHhcCCCCceeeeccCCCcccCCHHHHHHHHHHc
Confidence 332 222211 136787777665544 566777777776
No 205
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=41.83 E-value=46 Score=31.96 Aligned_cols=46 Identities=11% Similarity=0.196 Sum_probs=35.2
Q ss_pred CCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHh
Q 009761 100 YNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRW 147 (526)
Q Consensus 100 yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~ 147 (526)
-+|...|++.++.+-+++.- ++.|++++...+++.|....+.-++|
T Consensus 45 ~~e~~~Leq~l~~L~~kt~~--QiaVv~vpSt~g~~IE~ya~rlfd~W 90 (271)
T COG1512 45 AAERGALEQQLADLEQKTGA--QIAVVTVPSTGGETIEQYATRLFDKW 90 (271)
T ss_pred hhhHHHHHHHHHHHHhccCC--eEEEEEecCCCCCCHHHHHHHHHHhc
Confidence 35567899999999888753 47776778877888887777777776
No 206
>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase. Built to distinquish between the highly similar genes galU and galF
Probab=40.70 E-value=2.6e+02 Score=26.31 Aligned_cols=103 Identities=15% Similarity=0.063 Sum_probs=55.0
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHH---H------------HHhh--ccCCcEEEEe
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELE---C------------QRWA--SKGINIKYEI 158 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~---~------------~~~~--~~~~~v~~~~ 158 (526)
++|.-+. ..++..++++.+.... ++ ++|.... .+...+-.... . .+.. ..+.++.+..
T Consensus 25 llpi~g~-pli~~~l~~l~~~gi~--~v-~iv~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 99 (260)
T TIGR01099 25 MLPIVDK-PLIQYVVEEAVEAGIE--DI-LIVTGRG-KRAIEDHFDTSYELEHQLEKRGKEELLKEVRSISPLATIFYVR 99 (260)
T ss_pred eEEECCE-EHHHHHHHHHHhCCCC--EE-EEEeCCc-HHHHHHHhcccHHHHHHHHhhhhHHHHHHhhhccccceEEEEe
Confidence 5677666 8899999998875432 23 3243332 22222111100 0 0000 0012344443
Q ss_pred eCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChH--HHHHHHhhhh
Q 009761 159 RDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPD--FLWRTIPFLV 207 (526)
Q Consensus 159 ~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd--~L~~lv~~~~ 207 (526)
.+...|-++++..+.+.. +.+-++++-+|.....+ .+.++++...
T Consensus 100 -~~~~~G~~~al~~~~~~~---~~~~~lv~~gD~~~~~~~~~~~~l~~~~~ 146 (260)
T TIGR01099 100 -QKEQKGLGHAVLCAEPFV---GDEPFAVILGDDIVVSEEPALKQMIDLYE 146 (260)
T ss_pred -cCCCCCHHHHHHHHHHhh---CCCCEEEEeccceecCCcHHHHHHHHHHH
Confidence 333345788888888776 44556667777666543 6788887663
No 207
>cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity. N-terminal domain of eEIF-2B epsilon and gamma, subunits of eukaryotic translation initiators, is a subfamily of glycosyltranferase 2 and is predicted to have glycosyltranferase activity. eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=38.90 E-value=2e+02 Score=26.40 Aligned_cols=98 Identities=10% Similarity=0.085 Sum_probs=49.7
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEe-eCCCCCCCccHHHHHh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEI-RDSRNGYKAGALKEGM 174 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~-~~~~~g~K~~aln~gl 174 (526)
++|+-|. +.+..+++.+.+.... ++.| |+....+...+.+.+.....+ ..+..+.+.. ......|-+.++..+.
T Consensus 25 llpv~g~-pli~~~l~~l~~~gi~--~i~v-v~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~Gta~~l~~~~ 99 (216)
T cd02507 25 LLPVANV-PLIDYTLEWLEKAGVE--EVFV-VCCEHSQAIIEHLLKSKWSSL-SSKMIVDVITSDLCESAGDALRLRDIR 99 (216)
T ss_pred cceECCE-EHHHHHHHHHHHCCCC--eEEE-EeCCcHHHHHHHHHhcccccc-cCCceEEEEEccCCCCCccHHHHHHHh
Confidence 5677676 8888999988875432 2333 444332222222221110000 0112232221 2223334677777776
Q ss_pred hhhcccCCcEEEEecCCCCCChHHHHHHH
Q 009761 175 KHSYVKQCDYVAIFDADFEPEPDFLWRTI 203 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~~~~pd~L~~lv 203 (526)
+.. +.| ++++.+|.+.+.+. .+++
T Consensus 100 ~~i---~~d-flv~~gD~i~~~~l-~~~l 123 (216)
T cd02507 100 GLI---RSD-FLLLSCDLVSNIPL-SELL 123 (216)
T ss_pred hcC---CCC-EEEEeCCEeecCCH-HHHH
Confidence 665 555 67799998876664 3444
No 208
>cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2. N-terminal domain of epsilon subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=35.94 E-value=3.4e+02 Score=24.73 Aligned_cols=108 Identities=11% Similarity=0.028 Sum_probs=53.4
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhcc--CCcEEEEeeCCCCCCC
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASK--GINIKYEIRDSRNGYK 166 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~--~~~v~~~~~~~~~g~K 166 (526)
+.|+- ++|+-|. +.+...|+++.+..-. ++ ++++.. ..+..++..+... .+... +..+.+.. .....+-
T Consensus 20 ~~pK~--llpi~g~-piI~~~l~~l~~~Gi~--~I-~iv~~~-~~~~i~~~l~~~~-~~~~~~~~~~i~~~~-~~~~~~~ 90 (217)
T cd04197 20 EKPRC--LLPLANV-PLIDYTLEFLALNGVE--EV-FVFCCS-HSDQIKEYIEKSK-WSKPKSSLMIVIIIM-SEDCRSL 90 (217)
T ss_pred CCCce--eeEECCE-ehHHHHHHHHHHCCCC--eE-EEEeCC-CHHHHHHHHhhcc-ccccccCcceEEEEe-CCCcCcc
Confidence 34543 6788887 5999999999886532 23 334443 2222222222110 11000 12355543 3233334
Q ss_pred ccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhc
Q 009761 167 AGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH 208 (526)
Q Consensus 167 ~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 208 (526)
++++........ -.|.++++.+|.+.+.| +.+++....+
T Consensus 91 ~~al~~~~~~~~--~~~~flv~~gD~i~~~d-l~~~l~~h~~ 129 (217)
T cd04197 91 GDALRDLDAKGL--IRGDFILVSGDVVSNID-LKEILEEHKE 129 (217)
T ss_pred chHHHHHhhccc--cCCCEEEEeCCeeeccC-HHHHHHHHHH
Confidence 555433221110 12446789999887655 5566665533
No 209
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=35.85 E-value=2.3e+02 Score=28.99 Aligned_cols=108 Identities=14% Similarity=0.151 Sum_probs=58.8
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEee-C--C----
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIR-D--S---- 161 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~-~--~---- 161 (526)
+.|+. ++|+-|..+.|+..|+++.+.... .++++.....+ ... +...+.|...+....++.. + +
T Consensus 25 ~~PK~--llPv~gk~plI~~~L~~l~~~Gi~---~i~iv~~~~~~-~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (407)
T PRK00844 25 DRAKP--AVPFGGSYRLIDFVLSNLVNSGYL---RIYVLTQYKSH-SLD---RHISQTWRLSGLLGNYITPVPAQQRLGK 95 (407)
T ss_pred CCccc--ceeeCCcceEhHHHHHHHHHCCCC---EEEEEeccCHH-HHH---HHHHhCcCccccCCCeEEECCcccCCCC
Confidence 34544 678888778899999999886543 23334443322 222 2221222111122223311 1 1
Q ss_pred -CCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 162 -RNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 162 -~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
...|-++|+..+.+.......|+++++.+|.+.+.| +.+++...
T Consensus 96 ~~~lGta~al~~a~~~i~~~~~~~~lv~~gD~v~~~d-l~~l~~~h 140 (407)
T PRK00844 96 RWYLGSADAIYQSLNLIEDEDPDYVVVFGADHVYRMD-PRQMVDFH 140 (407)
T ss_pred CcccCCHHHHHHHHHHHHhcCCCEEEEecCCEEEcCC-HHHHHHHH
Confidence 124578888888776521233789999999876654 45566544
No 210
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=35.11 E-value=3.2e+02 Score=28.09 Aligned_cols=91 Identities=21% Similarity=0.260 Sum_probs=48.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCC-CCCCccHHHHHh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSR-NGYKAGALKEGM 174 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~-~g~K~~aln~gl 174 (526)
++|+-+ .+.+..+++.+.+. ..++.| ++. ..++..+ + ...++ ..+++++...+. ..|.++++.. .
T Consensus 24 Llpi~g-kPli~~~i~~l~~~---~~~i~I-vv~-~~~~~i~---~-~~~~~---~~~v~~~~~~~~~~~gt~~al~~-~ 89 (430)
T PRK14359 24 LHTICG-KPMLFYILKEAFAI---SDDVHV-VLH-HQKERIK---E-AVLEY---FPGVIFHTQDLENYPGTGGALMG-I 89 (430)
T ss_pred eCEECC-ccHHHHHHHHHHHc---CCcEEE-EEC-CCHHHHH---H-HHHhc---CCceEEEEecCccCCCcHHHHhh-c
Confidence 345544 56778888888764 133444 332 2233222 2 22221 234555533322 2335666644 1
Q ss_pred hhhcccCCcEEEEecCCC-CCChHHHHHHHh
Q 009761 175 KHSYVKQCDYVAIFDADF-EPEPDFLWRTIP 204 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~ 204 (526)
.. ..|.++++++|. ...++.++++.+
T Consensus 90 -~~---~~d~vlv~~gD~p~~~~~~l~~l~~ 116 (430)
T PRK14359 90 -EP---KHERVLILNGDMPLVEKDELEKLLE 116 (430)
T ss_pred -cc---CCCeEEEEECCccCCCHHHHHHHHh
Confidence 12 568999999998 457888877653
No 211
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]
Probab=34.65 E-value=4.9e+02 Score=26.12 Aligned_cols=196 Identities=16% Similarity=0.076 Sum_probs=102.0
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHc-CCC-CCCce-EEEEEcCCCch-hHHHHHHHHHHHhhccCCcEEEEeeCC---CC
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACG-LSW-PSDRI-TIQVLDDSTDP-TIKDLVELECQRWASKGINIKYEIRDS---RN 163 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~-q~y-p~~~~-~I~V~D~s~D~-t~~~l~~~~~~~~~~~~~~v~~~~~~~---~~ 163 (526)
|.+-++|...-+.-.-++.++.--. +.. .+.++ .++++--.+++ .....+.+..+.+ .++....-.+ +-
T Consensus 95 ~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~~y----gDIi~~df~Dty~nl 170 (349)
T KOG2287|consen 95 PELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADEARLY----GDIIQVDFEDTYFNL 170 (349)
T ss_pred ceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHHHHHh----CCEEEEecccchhch
Confidence 5677777777776544444443322 221 22234 23333322222 2222333333333 3454443332 22
Q ss_pred CCCccH-HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEec-CCCcHHHHHHHHhhhhhh
Q 009761 164 GYKAGA-LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVN-ADECLMTRMQEMSLDYHF 241 (526)
Q Consensus 164 g~K~~a-ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~ 241 (526)
..|.-+ ++.+-..+ ++.++|+-.|+|..+.++-|.+.+..- .+|.-....|...... .......++ +
T Consensus 171 tlKtl~~l~w~~~~c--p~akfi~K~DDDvfv~~~~L~~~L~~~-~~~~~~~~~G~v~~~~~p~R~~~~Kw--------y 239 (349)
T KOG2287|consen 171 TLKTLAILLWGVSKC--PDAKFILKIDDDVFVNPDNLLEYLDKL-NDPSSDLYYGRVIQNAPPIRDKTSKW--------Y 239 (349)
T ss_pred HHHHHHHHHHHHhcC--CcceEEEeccCceEEcHHHHHHHHhcc-CCCCcceEEEeecccCCCCCCCCCCC--------c
Confidence 223332 34444434 479999999999999999887776654 2566666666654320 000000110 0
Q ss_pred hhhhhccccCCCcccccccceeeeHHHHHHcCC---CCCCCccchHHHHHHHHhC-CCeEEEecc
Q 009761 242 TVEQEVGSSTYAFFGFNGTAGVWRISALNEAGG---WKDRTTVEDMDLAVRASLK-GWKFVYVGD 302 (526)
Q Consensus 242 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg---~~~~~~~ED~~l~~rl~~~-G~~~~~~~~ 302 (526)
..... ......+..++|.+.++.+++.+.+-. .....-.||..++.-+.+. |.+-...+.
T Consensus 240 Vp~~~-y~~~~YP~Y~sG~gYvis~~~a~~l~~~s~~~~~~~iEDV~~g~~l~~~~gi~~~~~~~ 303 (349)
T KOG2287|consen 240 VPESE-YPCSVYPPYASGPGYVISGDAARRLLKASKHLKFFPIEDVFVGGCLAEDLGIKPVNHPG 303 (349)
T ss_pred cCHHH-CCCCCCCCcCCCceeEecHHHHHHHHHHhcCCCccchHHHHHHHHHHHhcCCCcccCcc
Confidence 00000 111123444779999999999876532 1222256999999999887 765554443
No 212
>PF07507 WavE: WavE lipopolysaccharide synthesis; InterPro: IPR011122 These proteins are encoded by putative wav gene clusters, which are responsible for the synthesis of the core oligosaccharide (OS) region of Vibrio cholerae lipopolysaccharide [].
Probab=33.88 E-value=1.2e+02 Score=29.84 Aligned_cols=95 Identities=9% Similarity=0.151 Sum_probs=50.4
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEE--cCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHH-------
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVL--DDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALK------- 171 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~--D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln------- 171 (526)
.|+....+|++|+. ..+|+.+ |+++ +|.+-..++ .++.+.. ++.|..+... .....+ ...|.|
T Consensus 17 ~~~~~t~~~l~siR-~~~P~A~--IILSTW~~~d~~~l~--~D~vv~s-~DPG~~~~~~-~~~~~~-~~~NiNrQi~St~ 88 (311)
T PF07507_consen 17 QEPDITKNCLASIR-KHFPGAE--IILSTWEGQDISGLD--YDQVVIS-DDPGSNVVLY-KKDGKP-GPNNINRQIVSTL 88 (311)
T ss_pred ccchhHHHHHHHHH-HhCCCCE--EEEECCCCCCcccCC--cceEEec-CCCCcceeec-cCCCCC-cccchhHHHHHHH
Confidence 55678889998885 5688755 4344 232111111 0000000 1123332222 111111 244444
Q ss_pred HHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 172 EGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 172 ~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
.|++++ +.+|++=+=+|..+..+-+-++...+
T Consensus 89 aGL~~~---~~~Ya~KlRtD~~l~~~~~l~~~~~~ 120 (311)
T PF07507_consen 89 AGLKAA---KTKYAMKLRTDNRLTGNNFLDLYEKY 120 (311)
T ss_pred HHHHHh---CCceEEEEcccccccchHHHHHHHHh
Confidence 789999 89999999999888655444444433
No 213
>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana.
Probab=33.45 E-value=1.4e+02 Score=28.81 Aligned_cols=209 Identities=14% Similarity=0.043 Sum_probs=96.7
Q ss_pred CCCcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 89 AYPMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 89 ~~P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
..|+.-+.+|+=-.. +.+...+... .- +..+.++.-|+..|+=-+ +. |. ..-+++. ..++.|=
T Consensus 39 ~~~k~Lla~~VG~kqk~~vd~~v~Kf-~~---nF~i~LfhYDg~vd~w~~-~~------ws--~~aiHv~---~~kqtKw 102 (294)
T PF05212_consen 39 KKPKYLLAMTVGIKQKDNVDAIVKKF-SD---NFDIMLFHYDGRVDEWDD-FE------WS--DRAIHVS---ARKQTKW 102 (294)
T ss_pred CCCceEEEEEecHHHHhhhhHHHhhh-cc---CceEEEEEecCCcCchhh-cc------cc--cceEEEE---eccceEE
Confidence 345666666664333 5566666555 22 344666667887765311 10 10 1112222 2222232
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcH-HHHHHHHhhhhhh-hhhh
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECL-MTRMQEMSLDYHF-TVEQ 245 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~ 245 (526)
--...-+.--....+|||.+.|.|..++...+.+.+..++ ..+..+.|.-.......-++ .+. +.-....+. ....
T Consensus 103 w~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk-~~gLeISQPALd~~~~~~~~~iT~-R~~~~~vhr~~~~~ 180 (294)
T PF05212_consen 103 WFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVK-KEGLEISQPALDPDSSEIHHPITK-RRPDSEVHRKTRGG 180 (294)
T ss_pred eehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHH-HhCCcccCcccCCCCceeeeeEEe-ecCCceeEeccCCC
Confidence 2222222111124899999999998887777777766653 33333333322110000000 000 000000000 0000
Q ss_pred h-ccccCCCccc---ccccceeeeHHHHHHcCC-CCCCC---ccchHHHHHHHHhCCCeEEEeccccccccCCcChHH
Q 009761 246 E-VGSSTYAFFG---FNGTAGVWRISALNEAGG-WKDRT---TVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKA 315 (526)
Q Consensus 246 ~-~~~~~~~~~~---~~G~~~~~Rr~~l~~~gg-~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p~t~~~ 315 (526)
. .........| .-...=+|+|++++-+=. +..+. -+=|+.++..+..+..++..++...+.|....|+..
T Consensus 181 ~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~~~~~~kiGVVDs~~VvH~gvptLG~ 258 (294)
T PF05212_consen 181 PRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCAGDRHKKIGVVDSQYVVHTGVPTLGG 258 (294)
T ss_pred CCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHhccccccEEEEeeEEEEEcCCCcCCC
Confidence 0 0000011110 112344689999876521 11121 344888888887778899988877766555555443
No 214
>KOG0070 consensus GTP-binding ADP-ribosylation factor Arf1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.39 E-value=70 Score=28.55 Aligned_cols=40 Identities=15% Similarity=0.053 Sum_probs=27.6
Q ss_pred HHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHh
Q 009761 108 LSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRW 147 (526)
Q Consensus 108 ~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~ 147 (526)
..++.+-..-|++-+.+|+|+|.++-+..++..+++.+-+
T Consensus 72 ~k~R~lW~~Y~~~t~~lIfVvDS~Dr~Ri~eak~eL~~~l 111 (181)
T KOG0070|consen 72 EKLRPLWKHYFQNTQGLIFVVDSSDRERIEEAKEELHRML 111 (181)
T ss_pred cccccchhhhccCCcEEEEEEeCCcHHHHHHHHHHHHHHH
Confidence 3445555667777788898999888777776666655544
No 215
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase. This enzyme, glucose-1-phosphate adenylyltransferase, is also called ADP-glucose pyrophosphorylase. The plant form is an alpha2,beta2 heterodimer, allosterically regulated in plants. Both subunits are homologous and included in this model. In bacteria, both homomeric forms of GlgC and more active heterodimers of GlgC and GlgD have been described. This model describes the GlgC subunit only. This enzyme appears in variants of glycogen synthesis pathways that use ADP-glucose, rather than UDP-glucose as in animals.
Probab=31.04 E-value=1.7e+02 Score=29.35 Aligned_cols=103 Identities=10% Similarity=0.104 Sum_probs=55.7
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhcc---CCcEEEEe------eCCCCCCC
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASK---GINIKYEI------RDSRNGYK 166 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~---~~~v~~~~------~~~~~g~K 166 (526)
++|.-+..+.++..++++.+..- +.+++|.....+. ..+..+ +.+... ...+++.. .++...|.
T Consensus 23 llpv~g~~pli~~~l~~l~~~gi---~~i~iv~~~~~~~-i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt 95 (361)
T TIGR02091 23 AVPFGGKYRIIDFPLSNCINSGI---RRIGVLTQYKSHS-LNRHIQ---RGWDFDGFIDGFVTLLPAQQRESGTDWYQGT 95 (361)
T ss_pred cceecceeeEeeehhhhhhhcCC---ceEEEEeccChHH-HHHHHH---hccCccCccCCCEEEeCCcccCCCCccccCc
Confidence 57777765678888888877643 2334344433332 222222 222111 11233321 11112357
Q ss_pred ccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 167 AGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 167 ~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
++++..+++.......|.++++.+|.+.+.+ +.+++...
T Consensus 96 ~~al~~a~~~~~~~~~~~~lv~~gD~l~~~~-l~~~l~~~ 134 (361)
T TIGR02091 96 ADAVYQNLDLIEDYDPEYVLILSGDHIYKMD-YEKMLDYH 134 (361)
T ss_pred HHHHHHHHHHHHhcCCCEEEEecCCEEEcCC-HHHHHHHH
Confidence 8888888777622235789999999877665 55656544
No 216
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=29.62 E-value=4.7e+02 Score=24.39 Aligned_cols=88 Identities=14% Similarity=0.045 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEE-EcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCC-----C-CCCccH-HH---H
Q 009761 104 EVYQLSIGAACGLSWPSDRITIQV-LDDSTDPTIKDLVELECQRWASKGINIKYEIRDSR-----N-GYKAGA-LK---E 172 (526)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V-~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~-----~-g~K~~a-ln---~ 172 (526)
..+..++.|+.+..-. ..+.++| .|+-++...+ ..+..... .+..+++..-+.. . ..+... .+ .
T Consensus 13 ~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~-~L~~~~~~---~~~~i~~~~i~~~~~~~~~~~~~~~~~~~y~rl 87 (248)
T cd04194 13 PYLAVTIKSILANNSK-RDYDFYILNDDISEENKK-KLKELLKK---YNSSIEFIKIDNDDFKFFPATTDHISYATYYRL 87 (248)
T ss_pred HHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHH-HHHHHHHh---cCCeEEEEEcCHHHHhcCCcccccccHHHHHHH
Confidence 6788888999864321 2344444 4554555544 33333332 1344554432211 0 001111 11 1
Q ss_pred HhhhhcccCCcEEEEecCCCCCChH
Q 009761 173 GMKHSYVKQCDYVAIFDADFEPEPD 197 (526)
Q Consensus 173 gl~~a~~~~~d~v~~lDaD~~~~pd 197 (526)
-+.... ++.|-++.+|+|.++..|
T Consensus 88 ~l~~ll-~~~~rvlylD~D~lv~~d 111 (248)
T cd04194 88 LIPDLL-PDYDKVLYLDADIIVLGD 111 (248)
T ss_pred HHHHHh-cccCEEEEEeCCEEecCC
Confidence 111111 368999999999887554
No 217
>PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional
Probab=29.15 E-value=4.1e+02 Score=26.79 Aligned_cols=86 Identities=8% Similarity=-0.019 Sum_probs=50.8
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+....++.+++.+... .++ ++++..+... +.. + . .++.++.......|-..++..|++++
T Consensus 198 ~Gk~ll~~~l~~l~~~---~~~-vvV~~~~~~~---~~~-~----~-----~~v~~i~d~~~~~Gpl~gi~~al~~~--- 257 (369)
T PRK14490 198 HESNQLVHTAALLRPH---CQE-VFISCRAEQA---EQY-R----S-----FGIPLITDSYLDIGPLGGLLSAQRHH--- 257 (369)
T ss_pred CCccHHHHHHHHHHhh---CCE-EEEEeCCchh---hHH-h----h-----cCCcEEeCCCCCCCcHHHHHHHHHhC---
Confidence 4556888888888653 122 2323332211 111 1 1 23444433332334667778888876
Q ss_pred CCcEEEEecCCCC-CChHHHHHHHhhh
Q 009761 181 QCDYVAIFDADFE-PEPDFLWRTIPFL 206 (526)
Q Consensus 181 ~~d~v~~lDaD~~-~~pd~L~~lv~~~ 206 (526)
+.+.++++=+|.- ++++.+++++...
T Consensus 258 ~~~~~lv~~~DmP~i~~~~i~~L~~~~ 284 (369)
T PRK14490 258 PDAAWLVVACDLPFLDEATLQQLVEGR 284 (369)
T ss_pred CCCcEEEEeCCcCCCCHHHHHHHHHhc
Confidence 6778889999954 4899999998864
No 218
>COG3181 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.02 E-value=3.4e+02 Score=26.84 Aligned_cols=111 Identities=13% Similarity=0.053 Sum_probs=57.5
Q ss_pred cEEEEEecCCCh--HHHHHHHHHHHcCCCCCCceEEEEEc-CCCchhHHHHHHHHHHHhhccCCcEEEEeeCCC------
Q 009761 92 MVLVQIPMYNEK--EVYQLSIGAACGLSWPSDRITIQVLD-DSTDPTIKDLVELECQRWASKGINIKYEIRDSR------ 162 (526)
Q Consensus 92 ~VsViIp~yne~--~~l~~~L~sl~~q~yp~~~~~I~V~D-~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~------ 162 (526)
.+++|+|.---. +.+.|++...+..++.. .++|.+ .+...+.. ..+ ..+. +. |..+.......+
T Consensus 29 ~it~Ivp~~~GGg~D~~aR~~~~~l~k~lg~---~v~V~N~pGagG~ia-~~~-va~a-~p-G~t~~l~~~~~~~~~~~~ 101 (319)
T COG3181 29 PITIIVPAAAGGGTDQTARALAESLSKELGQ---PVVVDNKPGAGGAIA-AGA-VAKA-AP-GYTILLIAGSTPALLLPI 101 (319)
T ss_pred CeEEEEecCCCChHHHHHHHHHHHHHHHhCC---CEEEEecCCCcchHH-HHH-HHhc-CC-CCceEEEecCcccccchh
Confidence 389999876544 78889998888766543 232343 24444433 222 1111 11 233333322110
Q ss_pred CCCCc-cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCC
Q 009761 163 NGYKA-GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPD 211 (526)
Q Consensus 163 ~g~K~-~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~ 211 (526)
.+++. .-++..--.+.......++.+++|.-+ +.+.+++.++++||+
T Consensus 102 ~~~~~~~~~~D~~pva~v~~~p~~l~v~~~s~~--~t~~dlv~~~k~~p~ 149 (319)
T COG3181 102 LGGLPYYKLKDFTPVASLVSDPGVLVVRADSPY--KTLKDLVAYAKADPG 149 (319)
T ss_pred hccCCCCchhhceehhheecccceEEEeCCCCc--ccHHHHHHHHHhCCC
Confidence 01111 111111111111255678888888765 567888999999998
No 219
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=28.78 E-value=42 Score=30.67 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=23.1
Q ss_pred cCCcEEEEecCC-CCCChHHHHHHHhhhhcCCCEEEEeeE
Q 009761 180 KQCDYVAIFDAD-FEPEPDFLWRTIPFLVHNPDIALVQAR 218 (526)
Q Consensus 180 ~~~d~v~~lDaD-~~~~pd~L~~lv~~~~~~~~v~~V~~~ 218 (526)
++.|+|+++|+| -++.|+- .+..+ -||+++++--.
T Consensus 40 ~~~~~vlflDaDigVvNp~~---~iEef-id~~~Di~fyd 75 (222)
T PF03314_consen 40 PEYDWVLFLDADIGVVNPNR---RIEEF-IDEGYDIIFYD 75 (222)
T ss_pred ccCCEEEEEcCCceeecCcc---cHHHh-cCCCCcEEEEe
Confidence 478999999999 4557763 23344 26777766433
No 220
>PRK00576 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=28.40 E-value=4.1e+02 Score=23.30 Aligned_cols=43 Identities=7% Similarity=-0.031 Sum_probs=29.7
Q ss_pred CCccHHHHHhhhhcccCCcEEEEecCCCC-CChHHHHHHHhhhh
Q 009761 165 YKAGALKEGMKHSYVKQCDYVAIFDADFE-PEPDFLWRTIPFLV 207 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~ 207 (526)
|-..++-.|++.+...+.|+++++=+|.- ++++.+++++...+
T Consensus 58 gpl~~~~~gl~~~~~~~~~~~lv~~~DmP~i~~~~i~~L~~~~~ 101 (178)
T PRK00576 58 GPLPATGRGLRAAAEAGARLAFVCAVDMPYLTVELIDDLARPAA 101 (178)
T ss_pred CcHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 34555555676542225799999999954 48999999888653
No 221
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=27.80 E-value=4.6e+02 Score=24.46 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=63.7
Q ss_pred cEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHH
Q 009761 92 MVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALK 171 (526)
Q Consensus 92 ~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln 171 (526)
+|-|..|-.|..+.....++-+...+.+++. +|.|..+.+|++.++++ +..+-.-.+ .| |..+..
T Consensus 129 PviVHTPr~nK~e~t~~ildi~~~~~l~~~l---vvIDH~N~etv~~vld~--------e~~vGlTvq---Pg-Klt~~e 193 (254)
T COG1099 129 PVIVHTPRRNKKEATSKILDILIESGLKPSL---VVIDHVNEETVDEVLDE--------EFYVGLTVQ---PG-KLTVEE 193 (254)
T ss_pred cEEEeCCCCcchhHHHHHHHHHHHcCCChhh---eehhcccHHHHHHHHhc--------cceEEEEec---CC-cCCHHH
Confidence 3888999999999999999988888887654 36788888888866652 122222212 23 665533
Q ss_pred HHhhhhcc-cCCcEEEEecCCCCC-ChHHHHHHHhhhh
Q 009761 172 EGMKHSYV-KQCDYVAIFDADFEP-EPDFLWRTIPFLV 207 (526)
Q Consensus 172 ~gl~~a~~-~~~d~v~~lDaD~~~-~pd~L~~lv~~~~ 207 (526)
+ .+.... ..-.+++--|++... +|-.+.+.+-.|+
T Consensus 194 A-veIV~ey~~~r~ilnSD~~s~~sd~lavprtal~m~ 230 (254)
T COG1099 194 A-VEIVREYGAERIILNSDAGSAASDPLAVPRTALEME 230 (254)
T ss_pred H-HHHHHHhCcceEEEecccccccccchhhhHHHHHHH
Confidence 2 222110 135677777777655 6677777777663
No 222
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=27.04 E-value=1.9e+02 Score=29.19 Aligned_cols=110 Identities=8% Similarity=0.126 Sum_probs=57.7
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhcc--CCcEEE----EeeCCC
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASK--GINIKY----EIRDSR 162 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~--~~~v~~----~~~~~~ 162 (526)
+.|+. ++|.-+..+.|+..|+++.+.... ++ ++|... ..+..++..+. ..+|.-. ..++.+ ....++
T Consensus 23 ~~PK~--llpv~gk~pli~~~l~~l~~~Gi~--~i-~iv~~~-~~~~i~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~ 95 (380)
T PRK05293 23 NIAKP--AVPFGGKYRIIDFTLSNCANSGID--TV-GVLTQY-QPLELNNHIGI-GSPWDLDRINGGVTILPPYSESEGG 95 (380)
T ss_pred CCccc--eeeeCCceeehhHHHHHHHhCCCC--EE-EEEecC-CHHHHHHHHhC-CCcccccCCCCCEEEeCCcccCCCC
Confidence 34554 678877767899999999876542 23 334433 22222212111 0111100 011232 211221
Q ss_pred --CCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 163 --NGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 163 --~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
..|-++|+..+.+.....+.|.++++.+|.+.+.|.. +++...
T Consensus 96 ~~~~Gta~al~~a~~~l~~~~~~~~lV~~gD~l~~~d~~-~ll~~h 140 (380)
T PRK05293 96 KWYKGTAHAIYQNIDYIDQYDPEYVLILSGDHIYKMDYD-KMLDYH 140 (380)
T ss_pred cccCCcHHHHHHHHHHHHhCCCCEEEEecCCEEEcCCHH-HHHHHH
Confidence 2347888888877651112478999999988766644 555433
No 223
>COG1861 SpsF Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog [Cell envelope biogenesis, outer membrane]
Probab=26.64 E-value=5.3e+02 Score=24.04 Aligned_cols=95 Identities=14% Similarity=0.144 Sum_probs=54.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
+.|.-. ++.|+.+|+.+....+- ++++|--+|..+|+ ..+..|.+. .+.+. +|.-..-+...+.
T Consensus 22 LlpL~~-~pmI~~~lervrks~~~-d~ivvATS~~~~d~----~l~~~~~~~-----G~~vf-----rGs~~dVL~Rf~~ 85 (241)
T COG1861 22 LLPLGG-EPMIEYQLERVRKSKDL-DKIVVATSDKEEDD----ALEEVCRSH-----GFYVF-----RGSEEDVLQRFII 85 (241)
T ss_pred hhhcCC-CchHHHHHHHHhccccc-cceEEEecCCcchh----HHHHHHHHc-----CeeEe-----cCCHHHHHHHHHH
Confidence 444443 35678888888877664 34333223333333 344455542 34344 2323444444444
Q ss_pred hhcccCCcEEEEecCCCCC-ChHHHHHHHhhh
Q 009761 176 HSYVKQCDYVAIFDADFEP-EPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~~ 206 (526)
.+..-+++.|+-+-+|+-. +|+.+..++..+
T Consensus 86 a~~a~~~~~VVRvTGD~P~~dp~l~d~~v~~~ 117 (241)
T COG1861 86 AIKAYSADVVVRVTGDNPFLDPELVDAAVDRH 117 (241)
T ss_pred HHHhcCCCeEEEeeCCCCCCCHHHHHHHHHHH
Confidence 4333388899999999655 899998888544
No 224
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=26.05 E-value=1.4e+02 Score=27.58 Aligned_cols=18 Identities=28% Similarity=0.209 Sum_probs=13.7
Q ss_pred cCCcEEEEecCCCCCChH
Q 009761 180 KQCDYVAIFDADFEPEPD 197 (526)
Q Consensus 180 ~~~d~v~~lDaD~~~~pd 197 (526)
++.|-++.+|+|.++-.|
T Consensus 97 ~~~drilyLD~D~lv~~d 114 (250)
T PF01501_consen 97 PDYDRILYLDADTLVLGD 114 (250)
T ss_dssp TTSSEEEEE-TTEEESS-
T ss_pred hhcCeEEEEcCCeeeecC
Confidence 489999999999888543
No 225
>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=25.50 E-value=77 Score=32.08 Aligned_cols=93 Identities=17% Similarity=0.174 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcC--CCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 103 KEVYQLSIGAACGLSWPSDRITIQVLDD--STDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 103 ~~~l~~~L~sl~~q~yp~~~~~I~V~D~--s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
.+.++..++-+..++||.+....++-.+ +.++.++...++...++ ...+++....... -+.|++.+++..
T Consensus 105 r~~~~s~~q~l~~~~Y~~dp~~l~i~n~~~~~~~~~~~~~~~~~~e~----~p~~~v~~~~~~~-~~ea~~~evE~~--- 176 (415)
T KOG1971|consen 105 RELIKSNLQRLLELDYPLDPENLFIPNFEVAHSANIKEFFRRHGSEY----SPGKFVFPMFQPD-FSEARLMEVEHF--- 176 (415)
T ss_pred chhhhhccccchhccCCCCHHHhccccccccchhccHHHHHHhcccc----CCeeEEeeccCcc-HHHHHHHHHHHh---
Confidence 3555556777788899988766655544 33333343444333332 2234443333333 688999999988
Q ss_pred CCcEEEEecCCCCC-ChHHHHHHHhhh
Q 009761 181 QCDYVAIFDADFEP-EPDFLWRTIPFL 206 (526)
Q Consensus 181 ~~d~v~~lDaD~~~-~pd~L~~lv~~~ 206 (526)
+ + ++.|+|... .|+.+..+....
T Consensus 177 r--~-~~~dad~~i~~P~~~~~li~~~ 200 (415)
T KOG1971|consen 177 R--K-FSVDADFVITRPNTLRNLIVLN 200 (415)
T ss_pred h--h-cccccceeccCChhHHHHHHHh
Confidence 5 4 899999655 799998887765
No 226
>PF15609 PRTase_2: Phosphoribosyl transferase
Probab=23.71 E-value=3e+02 Score=24.85 Aligned_cols=40 Identities=15% Similarity=0.072 Sum_probs=25.0
Q ss_pred eEEEEEcC-CCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC
Q 009761 123 ITIQVLDD-STDPTIKDLVELECQRWASKGINIKYEIRDSRNG 164 (526)
Q Consensus 123 ~~I~V~D~-s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 164 (526)
-+|+|+|. ||-.|.-.+++.+.+.++ ..++.+..--+..+
T Consensus 123 ~lVLVDDEiSTG~T~lnli~al~~~~p--~~~yvvasL~d~~~ 163 (191)
T PF15609_consen 123 TLVLVDDEISTGNTFLNLIRALHAKYP--RKRYVVASLLDWRS 163 (191)
T ss_pred CEEEEecCccchHHHHHHHHHHHHhCC--CceEEEEEEeeCCC
Confidence 34556666 888888888888877765 23444444444443
No 227
>PF09623 Cas_NE0113: CRISPR-associated protein NE0113 (Cas_NE0113); InterPro: IPR019092 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a Cas protein family found in both bacteria and arachaea. The function of these proteins is unknown.
Probab=23.05 E-value=2.9e+02 Score=25.80 Aligned_cols=33 Identities=9% Similarity=0.053 Sum_probs=25.5
Q ss_pred EEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEE
Q 009761 94 LVQIPMYNEK-EVYQLSIGAACGLSWPSDRITIQ 126 (526)
Q Consensus 94 sViIp~yne~-~~l~~~L~sl~~q~yp~~~~~I~ 126 (526)
.|+|.+-+.. .++.++|..+.++.++.+++.|+
T Consensus 3 ~iLlatlG~sPqVVTETL~aL~~~g~~p~EV~vi 36 (224)
T PF09623_consen 3 NILLATLGTSPQVVTETLYALAQQGEIPDEVHVI 36 (224)
T ss_pred eEEEEecCCCchHHHHHHHHHHcCCCCCCEEEEE
Confidence 3567777776 79999999999988876665553
No 228
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=21.54 E-value=9e+02 Score=24.88 Aligned_cols=108 Identities=9% Similarity=0.017 Sum_probs=59.1
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhc---c-CCcEEEEe------
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWAS---K-GINIKYEI------ 158 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~---~-~~~v~~~~------ 158 (526)
+.|+. ++|+-+.+..|...|+++.+.... .++++.... .+... +...+.|.. . +..+.+..
T Consensus 35 ~~PK~--llpv~gkp~lI~~~l~~l~~~Gi~---~i~vv~~~~-~~~i~---~~~~~~~~~~~~~~~~~i~i~~~~~~~~ 105 (425)
T PRK00725 35 KRAKP--AVYFGGKFRIIDFALSNCINSGIR---RIGVLTQYK-AHSLI---RHIQRGWSFFREELGEFVDLLPAQQRVD 105 (425)
T ss_pred CCcce--eEEECCEEEEhHHHHHHHHHCCCC---eEEEEecCC-HHHHH---HHHHhhhcccccCCCCeEEEeCCcccCC
Confidence 34554 688888777899999998876432 233344432 22222 222122210 0 11122211
Q ss_pred eCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 159 RDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 159 ~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
.++...|-++|+..+.......+.|.++++.+|.+.+.| +.+++...
T Consensus 106 ~e~~~lGTa~al~~a~~~l~~~~~d~~lVl~gD~l~~~d-l~~ll~~h 152 (425)
T PRK00725 106 EENWYRGTADAVYQNLDIIRRYDPKYVVILAGDHIYKMD-YSRMLADH 152 (425)
T ss_pred CCccccCcHHHHHHHHHHHHhcCCCEEEEecCCeEeccC-HHHHHHHH
Confidence 011123578888888776521135889999999876655 66766654
No 229
>PF11181 YflT: Heat induced stress protein YflT
Probab=21.31 E-value=1.8e+02 Score=23.18 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=24.7
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEE
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITI 125 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I 125 (526)
+|-+|+.++.+...++.+.++.|..+.+.|
T Consensus 2 ~Igv~~~~~E~~~~I~~L~~~Gy~~ddI~V 31 (103)
T PF11181_consen 2 VIGVYDNEEEALSAIEELKAQGYSEDDIYV 31 (103)
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcccEEE
Confidence 356777788888999999999999887655
No 230
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal.
Probab=20.99 E-value=5.1e+02 Score=27.16 Aligned_cols=99 Identities=10% Similarity=0.097 Sum_probs=52.3
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCc-EEEEeeCCCCCCCccHHHHHh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGIN-IKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~-v~~~~~~~~~g~K~~aln~gl 174 (526)
++|.-+....++.+++.+.... + .+++| |... ... . ..++...++ +.+ ..++..+...| .++|+-.+.
T Consensus 26 ~l~l~g~~~ll~~tl~~l~~~~-~-~~ivi-v~~~-~~~--~-~~~~~l~~~---~~~~~~~i~Ep~~~g-Ta~ai~~aa 94 (468)
T TIGR01479 26 FLALVGDLTMLQQTLKRLAGLP-C-SSPLV-ICNE-EHR--F-IVAEQLREI---GKLASNIILEPVGRN-TAPAIALAA 94 (468)
T ss_pred eeEcCCCCcHHHHHHHHHhcCC-C-cCcEE-ecCH-HHH--H-HHHHHHHHc---CCCcceEEecccccC-chHHHHHHH
Confidence 4677677889999999988764 2 23333 3322 111 1 222222222 222 23443444333 566655443
Q ss_pred hhhcc--cCCcEEEEecCCCCC-ChHHHHHHHhh
Q 009761 175 KHSYV--KQCDYVAIFDADFEP-EPDFLWRTIPF 205 (526)
Q Consensus 175 ~~a~~--~~~d~v~~lDaD~~~-~pd~L~~lv~~ 205 (526)
..... ...++++++-+|+.. +++.+.++++.
T Consensus 95 ~~~~~~~~~~~~vlVl~~D~~i~~~~~f~~~l~~ 128 (468)
T TIGR01479 95 LLAARRNGEDPLLLVLAADHVITDEDAFQAAVKL 128 (468)
T ss_pred HHHHHHHCCCcEEEEecCceeecCHHHHHHHHHH
Confidence 33211 135689999999666 44566666553
No 231
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=20.43 E-value=2.2e+02 Score=28.62 Aligned_cols=44 Identities=20% Similarity=0.231 Sum_probs=22.1
Q ss_pred CCCcEEEEEecCCChHHH-HHHHHHHHcCCCCCCceEEEEEcCCCchh
Q 009761 89 AYPMVLVQIPMYNEKEVY-QLSIGAACGLSWPSDRITIQVLDDSTDPT 135 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l-~~~L~sl~~q~yp~~~~~I~V~D~s~D~t 135 (526)
.-|+|...-+++|+++.+ .+-|+++. |.-|+ +++-++|.|.|+-
T Consensus 342 s~~~V~L~Y~~~n~e~~~y~~eLr~~~-qkl~~--~~lHiiDSs~~g~ 386 (438)
T COG4097 342 SDPPVHLFYCSRNWEEALYAEELRALA-QKLPN--VVLHIIDSSKDGY 386 (438)
T ss_pred cCCceEEEEEecCCchhHHHHHHHHHH-hcCCC--eEEEEecCCCCCc
Confidence 345566666666666433 33445443 33343 3344455555544
No 232
>PHA01631 hypothetical protein
Probab=20.35 E-value=71 Score=27.90 Aligned_cols=46 Identities=20% Similarity=0.099 Sum_probs=26.1
Q ss_pred CCcEEEEeeCC--CCCCCccHHHHHhhhhcccCCcEEEEecCCCCCCh
Q 009761 151 GINIKYEIRDS--RNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEP 196 (526)
Q Consensus 151 ~~~v~~~~~~~--~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~p 196 (526)
..++.+..... |+-.-|..+-..++....-+.|+++++|+|..+++
T Consensus 39 ~~~Ii~~~t~~e~Rr~RIAk~Ll~Iln~~s~i~DDi~~iIDSDV~ipn 86 (176)
T PHA01631 39 QEKIIWIMTNTEIRWLRIAKQLLTIVNFAKNIEDDIIAIIDSDLIIPN 86 (176)
T ss_pred CCceEEecccchhHHHHHHHHHHHHHHhhccCCccEEEEeccceEecC
Confidence 34555553322 22224555556654421127889999999987765
Done!