Query 009761
Match_columns 526
No_of_seqs 445 out of 4047
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 12:25:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009761.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009761hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 1.7E-41 5.9E-46 373.8 39.7 347 87-453 136-511 (802)
2 3bcv_A Putative glycosyltransf 99.9 7.1E-27 2.4E-31 221.5 15.6 205 90-306 4-223 (240)
3 1xhb_A Polypeptide N-acetylgal 99.9 7.4E-26 2.5E-30 236.4 16.8 241 87-336 25-299 (472)
4 1qg8_A Protein (spore coat pol 99.9 9.5E-27 3.3E-31 222.8 8.5 215 91-326 1-235 (255)
5 2z86_A Chondroitin synthase; G 99.9 6E-25 2.1E-29 237.6 20.8 220 88-316 90-338 (625)
6 2d7i_A Polypeptide N-acetylgal 99.9 6.1E-25 2.1E-29 233.8 15.5 237 88-333 109-374 (570)
7 2ffu_A Ppgalnact-2, polypeptid 99.9 6.6E-24 2.3E-28 223.1 16.3 209 87-308 62-290 (501)
8 2z86_A Chondroitin synthase; G 99.9 2.6E-24 8.9E-29 232.7 12.9 224 88-332 372-599 (625)
9 4fix_A UDP-galactofuranosyl tr 99.9 1E-23 3.5E-28 226.0 11.9 230 88-323 177-438 (657)
10 3ckj_A Putative uncharacterize 99.9 1.3E-22 4.4E-27 201.4 17.6 208 88-307 45-263 (329)
11 3l7i_A Teichoic acid biosynthe 99.8 2.1E-22 7.2E-27 220.9 0.0 199 91-305 2-203 (729)
12 3f1y_A Mannosyl-3-phosphoglyce 99.8 1.3E-19 4.5E-24 182.2 18.8 197 89-307 92-308 (387)
13 2fy7_A Beta-1,4-galactosyltran 99.8 4.7E-20 1.6E-24 177.8 5.8 179 89-331 63-263 (287)
14 2nxv_A ATP synthase subunits r 99.8 6.6E-19 2.2E-23 167.5 12.5 183 88-310 13-205 (249)
15 2bo4_A Mannosylglycerate synth 99.6 1.5E-14 5.1E-19 145.0 18.2 194 95-303 4-212 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 99.1 4E-10 1.4E-14 107.6 11.3 106 90-202 52-180 (391)
17 1fo8_A Alpha-1,3-mannosyl-glyc 98.9 2.3E-09 7.8E-14 104.9 9.8 197 91-319 2-225 (343)
18 2zu9_A Mannosyl-3-phosphoglyce 98.9 6.2E-09 2.1E-13 102.5 12.2 105 91-206 51-184 (394)
19 3lw6_A FI08434P, beta-4-galact 98.1 5.5E-06 1.9E-10 76.8 8.7 179 90-331 50-250 (287)
20 2c0n_A A197; thermophil protei 96.8 0.0018 6.1E-08 56.5 6.3 116 166-297 37-165 (203)
21 3cu0_A Galactosylgalactosylxyl 94.7 0.35 1.2E-05 44.7 11.9 105 87-202 17-153 (281)
22 3tqd_A 3-deoxy-manno-octuloson 94.0 0.09 3.1E-06 49.0 6.6 182 104-301 35-234 (256)
23 2d0j_A Galactosylgalactosylxyl 93.9 0.55 1.9E-05 42.7 11.4 103 90-203 2-122 (246)
24 1v84_A Galactosylgalactosylxyl 93.9 0.31 1.1E-05 44.5 9.7 103 90-203 2-128 (253)
25 1omz_A Alpha-1,4-N-acetylhexos 92.2 0.41 1.4E-05 44.9 8.1 116 90-218 27-142 (293)
26 4fcu_A 3-deoxy-manno-octuloson 89.2 1.7 5.8E-05 40.1 9.5 96 101-211 24-121 (253)
27 3k8d_A 3-deoxy-manno-octuloson 86.9 3.9 0.00013 37.9 10.4 89 104-207 44-133 (264)
28 2wee_A MOBA-related protein; u 86.6 2.8 9.7E-05 36.5 9.0 91 101-205 29-120 (197)
29 2y6p_A 3-deoxy-manno-octuloson 86.5 3.7 0.00013 37.0 9.9 89 102-211 26-116 (234)
30 2waw_A MOBA relate protein; un 85.7 6.3 0.00022 34.2 10.8 91 101-205 29-120 (199)
31 3f1c_A Putative 2-C-methyl-D-e 85.5 4.7 0.00016 36.8 10.1 100 101-210 30-134 (246)
32 2j0a_A Beta-1,3-N-acetylglucos 84.6 0.96 3.3E-05 42.6 5.0 108 180-301 92-210 (280)
33 3st8_A Bifunctional protein GL 84.6 4.3 0.00015 41.6 10.4 107 91-208 31-138 (501)
34 3q80_A 2-C-methyl-D-erythritol 82.7 8.9 0.0003 34.6 10.5 166 101-302 33-209 (231)
35 1qwj_A Cytidine monophospho-N- 82.4 17 0.00058 32.5 12.4 92 102-209 27-123 (229)
36 3oam_A 3-deoxy-manno-octuloson 82.2 11 0.00037 34.5 11.1 97 97-209 22-119 (252)
37 1h7e_A 3-deoxy-manno-octuloson 81.1 20 0.00068 32.2 12.5 91 101-209 25-117 (245)
38 4fce_A Bifunctional protein GL 80.3 6.6 0.00023 39.4 9.7 101 97-215 31-132 (459)
39 3juk_A UDP-glucose pyrophospho 80.3 1.9 6.4E-05 40.4 5.3 54 152-209 95-152 (281)
40 3d5n_A Q97W15_sulso; NESG, SSR 80.2 2.1 7.1E-05 37.7 5.2 86 101-206 26-112 (197)
41 1e5k_A Molybdopterin-guanine d 77.6 8.1 0.00028 33.9 8.3 38 165-205 78-116 (201)
42 3ngw_A Molybdopterin-guanine d 77.0 12 0.00041 33.1 9.3 85 101-207 24-109 (208)
43 1ezi_A CMP-N-acetylneuraminic 76.5 11 0.00038 33.6 9.1 92 102-208 28-124 (228)
44 4ecm_A Glucose-1-phosphate thy 74.8 4 0.00014 37.8 5.8 95 101-207 53-147 (269)
45 2v0h_A Bifunctional protein GL 74.7 17 0.00059 36.2 11.0 94 97-207 28-122 (456)
46 2qh5_A PMI, ALGA, mannose-6-ph 73.7 12 0.00041 35.4 8.9 97 96-205 30-128 (308)
47 2vsh_A TARI, 2-C-methyl-D-eryt 73.0 19 0.00066 32.0 9.9 100 101-209 29-134 (236)
48 1vic_A 3-deoxy-manno-octuloson 71.7 30 0.001 31.5 11.0 92 101-208 25-118 (262)
49 1fxo_A Glucose-1-phosphate thy 70.7 9.2 0.00031 35.9 7.2 99 96-206 27-125 (293)
50 2xwl_A 2-C-methyl-D-erythritol 70.4 18 0.00061 31.9 8.9 89 102-206 29-118 (223)
51 1vgw_A 4-diphosphocytidyl-2C-m 70.1 44 0.0015 29.4 11.6 96 101-209 32-132 (231)
52 3pnn_A Conserved domain protei 70.0 20 0.00068 33.7 9.5 101 96-207 25-140 (303)
53 2yc3_A 2-C-methyl-D-erythritol 68.7 7.1 0.00024 34.8 5.8 94 102-208 31-125 (228)
54 3rsb_A Adenosylcobinamide-phos 68.6 14 0.00049 31.9 7.7 94 101-208 25-119 (196)
55 1i52_A 4-diphosphocytidyl-2-C- 68.1 16 0.00055 32.7 8.2 94 101-209 33-127 (236)
56 1hm9_A GLMU, UDP-N-acetylgluco 65.2 13 0.00044 37.4 7.5 96 97-209 34-130 (468)
57 1lvw_A Glucose-1-phosphate thy 65.1 16 0.00055 34.3 7.7 99 96-206 28-126 (295)
58 2e8b_A Probable molybdopterin- 64.8 27 0.00092 30.4 8.7 78 104-203 41-120 (201)
59 2ux8_A Glucose-1-phosphate uri 64.6 5.9 0.0002 37.2 4.5 104 97-209 40-161 (297)
60 2xme_A CTP-inositol-1-phosphat 63.2 6.5 0.00022 35.3 4.3 87 103-205 45-131 (232)
61 1w55_A ISPD/ISPF bifunctional 57.0 29 0.001 33.7 8.0 88 101-209 29-117 (371)
62 2e3d_A UTP--glucose-1-phosphat 55.7 18 0.00061 33.9 6.2 55 151-209 101-162 (302)
63 2gak_A Beta-1,6-N-acetylglucos 54.9 97 0.0033 30.2 11.5 107 90-205 83-198 (391)
64 1mc3_A Glucose-1-phosphate thy 53.3 18 0.0006 34.0 5.6 99 96-206 28-126 (296)
65 2pa4_A UTP-glucose-1-phosphate 48.5 19 0.00065 34.2 5.1 57 152-210 105-162 (323)
66 3cgx_A Putative nucleotide-dip 46.5 1.6E+02 0.0056 26.3 10.9 48 160-207 81-129 (242)
67 3tzt_A Glycosyl transferase fa 44.3 1.2E+02 0.0041 27.8 9.8 116 92-216 5-134 (276)
68 2px7_A 2-C-methyl-D-erythritol 41.6 95 0.0032 27.5 8.5 41 166-209 93-134 (236)
69 1vpa_A 2-C-methyl-D-erythritol 40.9 43 0.0015 29.6 6.0 43 166-208 91-134 (234)
70 1g9r_A Glycosyl transferase; a 36.2 1.2E+02 0.004 28.4 8.5 87 104-197 13-111 (311)
71 3kcq_A Phosphoribosylglycinami 36.0 2.3E+02 0.0077 24.9 10.2 94 93-201 9-102 (215)
72 4evw_A Nucleoside-diphosphate- 33.8 1.1E+02 0.0038 27.6 7.7 94 96-197 24-121 (255)
73 4ds3_A Phosphoribosylglycinami 30.3 2.8E+02 0.0094 24.2 9.3 96 93-201 8-106 (209)
74 1yp2_A Glucose-1-phosphate ade 27.1 2E+02 0.0067 28.3 8.8 105 96-208 45-161 (451)
75 1ll2_A Glycogenin-1; protein-s 25.0 2.2E+02 0.0074 26.9 8.2 18 180-197 93-110 (333)
76 3brk_X Glucose-1-phosphate ade 24.4 1.1E+02 0.0039 29.8 6.4 105 96-208 37-151 (420)
77 2dpw_A Hypothetical protein TT 24.1 1.5E+02 0.005 26.2 6.5 77 101-204 30-107 (232)
78 2l82_A Designed protein OR32; 23.2 2.5E+02 0.0084 21.4 6.4 24 104-128 62-85 (162)
79 3p9x_A Phosphoribosylglycinami 23.2 3.8E+02 0.013 23.4 10.0 92 97-201 7-101 (211)
80 3u2u_A Glycogenin-1, GN-1, GN1 23.1 2.2E+02 0.0074 25.9 7.5 17 181-197 95-111 (263)
81 2x65_A Mannose-1-phosphate gua 22.8 88 0.003 29.7 5.0 95 96-203 27-122 (336)
82 3av3_A Phosphoribosylglycinami 22.8 3.8E+02 0.013 23.3 10.1 94 95-201 6-102 (212)
83 1tzf_A Glucose-1-phosphate cyt 20.7 1.6E+02 0.0056 26.1 6.3 40 165-207 107-146 (259)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.7e-41 Score=373.82 Aligned_cols=347 Identities=24% Similarity=0.363 Sum_probs=241.2
Q ss_pred CCCCCcEEEEEecCCChH-HHHHHHHHHHcCCCCCCceEEEEEc-CCCchhHH--------------HHHHHHHHHhhcc
Q 009761 87 NSAYPMVLVQIPMYNEKE-VYQLSIGAACGLSWPSDRITIQVLD-DSTDPTIK--------------DLVELECQRWASK 150 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~-~l~~~L~sl~~q~yp~~~~~I~V~D-~s~D~t~~--------------~l~~~~~~~~~~~ 150 (526)
+++.|+|||+||+|||++ .+++||+|+.+|+||+++.+|+|+| +|+|+|.+ ...++.+++
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~---- 211 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRE---- 211 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHH----
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHh----
Confidence 467899999999999996 4599999999999998766555555 57887731 122223333
Q ss_pred CCcEEEEeeCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHH
Q 009761 151 GINIKYEIRDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMT 230 (526)
Q Consensus 151 ~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~ 230 (526)
.+++++.++++++||++|+|.|++.+ ++|||+++|+|+.++||++++++..+++||++++|+++....+.+. ...
T Consensus 212 -~~v~~i~~~~~~~GKa~alN~gl~~a---~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~-~~~ 286 (802)
T 4hg6_A 212 -LGVVYSTRERNEHAKAGNMSAALERL---KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDP-IQR 286 (802)
T ss_dssp -HTCEEEECSSCCSHHHHHHHHHHHHC---CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCH-HHH
T ss_pred -cCcEEEEecCCCCcchHHHHHHHHhc---CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCch-Hhh
Confidence 35778878888788999999999999 9999999999999999999999999988999999999988776531 111
Q ss_pred HHHHH-----hhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHhCCCeEEEeccccc
Q 009761 231 RMQEM-----SLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKV 305 (526)
Q Consensus 231 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~~ 305 (526)
..... .....+...+...+.... ..++|+++++||++++++|||+++.++||.+++.++.++||++.++|++.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~Rr~al~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~~~~ 365 (802)
T 4hg6_A 287 NLALGDRCPPENEMFYGKIHRGLDRWGG-AFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMI 365 (802)
T ss_dssp HHTCCTTSCCTTHHHHHTHHHHHHHTTC-CCCCSSSEEEEHHHHHHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCCCCE
T ss_pred hhhHHhhhhHHHHHHHHHHHhhHhhcCC-ceecccchhhhHHHHHHcCCcCCCCcchHHHHHHHHHHcCCeEEEecCCEE
Confidence 11000 011112222222222222 236799999999999999999999999999999999999999999999999
Q ss_pred cccCCcChHHHHHHHHhhhcchHHHHHhhcccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---
Q 009761 306 KNELPSTFKAYRYQQHRWSCGPANLFKKMVGEIMRTKKVTLWKKLYVIYSFFFVRKVVAHIVTFVFYCVLLPATVLF--- 382 (526)
Q Consensus 306 ~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~--- 382 (526)
+++.|.|++++.+||.||.+|.+|.++++. . +..+++++.+++.++..+.... .++..+. .++.|+.++.
T Consensus 366 ~~~~p~t~~~~~~Qr~RW~~G~~q~l~~~~-p-l~~~~l~~~~rl~~l~~~~~~~---~~~~~li--~ll~p~~~ll~~~ 438 (802)
T 4hg6_A 366 AGLQPETFASFIQQRGRWATGMMQMLLLKN-P-LFRRGLGIAQRLCYLNSMSFWF---FPLVRMM--FLVAPLIYLFFGI 438 (802)
T ss_dssp EECCCCSHHHHHHHHHHHHHHHHHHHHHSC-T-TSCSSCCHHHHHHHHHHHHHTT---HHHHHHH--HHHHHHHHHHHCC
T ss_pred EecCCCCHHHHHHHHHHHHccHHHHHHHhC-c-cccCCCCHHHHHHHHHHHHHHH---HHHHHHH--HHHHHHHHHHHhH
Confidence 999999999999999999999999998762 2 3345678888888765444311 1111111 1122322221
Q ss_pred CC--chhhHHHHHHHHHHHHHH---HHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecccCC
Q 009761 383 PE--VEVPKWGAVYIPSIITLL---NAVGTPRSLHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWVVTEKLGD 453 (526)
Q Consensus 383 ~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~w~~T~K~~~ 453 (526)
.. .....+..+++|..+... ..+.....+.+ ...++..++++..+.+++.++++. ++.+|.+|+|++.
T Consensus 439 ~~~~~~~~~~~~~~lp~~l~~~~~~~~~~~~~r~~~--~~~l~~~~~~~~~~~a~l~~l~~~-~~~~f~VT~Kg~~ 511 (802)
T 4hg6_A 439 EIFVATFEEVLAYMPGYLAVSFLVQNALFARQRWPL--VSEVYEVAQAPYLARAIVTTLLRP-RSARFAVTAKDET 511 (802)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHHHHHHHTTTSCTT--HHHHHHHHHHHHHHHHHHHHHHST-TCCCCCCCCCCCC
T ss_pred HHhhcCHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH--HHHHHHHHHHHHHHHHHHHHHhCC-CCCcceECCCCcc
Confidence 11 111223333344333211 11222222211 123556667788888999999963 6779999999553
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.94 E-value=7.1e-27 Score=221.53 Aligned_cols=205 Identities=15% Similarity=0.101 Sum_probs=138.6
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccH
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGA 169 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~a 169 (526)
.|+|||+||+||+++.+++||+|+++|+|++.+ +|+|+|+|+|+|.+ +++++.++ ..++++++ . ++.|++.|
T Consensus 4 ~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~e-iIvvDd~S~d~t~~-~~~~~~~~----~~~i~~i~-~-~n~G~~~a 75 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIE-IILIDDESPDNCPK-ICDDYAAQ----YPNIKVIH-K-KNAGLGMA 75 (240)
T ss_dssp CCSEEEEEEESSCTTTHHHHHHHHHTCSSSSEE-EEEEECCCSSSHHH-HHHHHHHH----CSSEEEEE-C-CCCCHHHH
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHhCcCCCeE-EEEEECCCCcCHHH-HHHHHHhh----CCCEEEEE-C-CCCChHHH
Confidence 588999999999999999999999999998633 44467779999876 66665555 35788884 3 45669999
Q ss_pred HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhh-hhhhh---hhh
Q 009761 170 LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSL-DYHFT---VEQ 245 (526)
Q Consensus 170 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~ 245 (526)
+|.|++.| ++|||+++|+|+.++|++|++++..+++ ++.+++.+.....+.+............ ...+. ...
T Consensus 76 ~N~g~~~a---~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (240)
T 3bcv_A 76 CNSGLDVA---TGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHT 151 (240)
T ss_dssp HHHHHHHC---CSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC--------------------CEEECSHHHHHH
T ss_pred HHHHHHHc---CCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeEEEccCCccccccccccccccccCHHHHHH
Confidence 99999999 9999999999999999999999999854 3445555544333222210000000000 00000 000
Q ss_pred hccccCC--------CcccccccceeeeHHHHHHcC-CCCCC--CccchHHHHHHHHhCCCeEEEecccccc
Q 009761 246 EVGSSTY--------AFFGFNGTAGVWRISALNEAG-GWKDR--TTVEDMDLAVRASLKGWKFVYVGDLKVK 306 (526)
Q Consensus 246 ~~~~~~~--------~~~~~~G~~~~~Rr~~l~~~g-g~~~~--~~~ED~~l~~rl~~~G~~~~~~~~~~~~ 306 (526)
....... .....+|+++++||++++++| ||++. ...||.+++.|+..+|+++.++|++..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~~ 223 (240)
T 3bcv_A 152 LLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFYN 223 (240)
T ss_dssp HHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC-----
T ss_pred HHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeEE
Confidence 0000000 011245788999999999999 99986 4689999999999999999999988653
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.93 E-value=7.4e-26 Score=236.40 Aligned_cols=241 Identities=16% Similarity=0.122 Sum_probs=167.5
Q ss_pred CCCCCcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCc-eEEEEEcCCCch-hHHHHHHHHHHHhhccCCcEEEEeeCCCC
Q 009761 87 NSAYPMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDR-ITIQVLDDSTDP-TIKDLVELECQRWASKGINIKYEIRDSRN 163 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~-~~I~V~D~s~D~-t~~~l~~~~~~~~~~~~~~v~~~~~~~~~ 163 (526)
+++.|+|||+||+|||+ +.+.++|+|+++|+||+.. ++|+|+|+|+|+ +.+ +++++.+++ +.++++++.+++.
T Consensus 25 ~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~-~l~~~~~~~---~~~v~vi~~~~n~ 100 (472)
T 1xhb_A 25 PDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKR-PLESYVKKL---KVPVHVIRMEQRS 100 (472)
T ss_dssp CSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTH-HHHHHHHSS---SSCEEEEECSSCC
T ss_pred CcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHH-HHHHHHHHC---CCcEEEEECCCCC
Confidence 35689999999999999 9999999999999998652 344466668886 554 666655542 2268888555555
Q ss_pred CCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHH---HHH--HHhhh
Q 009761 164 GYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMT---RMQ--EMSLD 238 (526)
Q Consensus 164 g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~---~~~--~~~~~ 238 (526)
| +++|+|.|++.| ++|||+++|+|+.++|++|++++..++++++++++ +.....+.+..... ... .+...
T Consensus 101 G-~~~a~N~g~~~A---~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (472)
T 1xhb_A 101 G-LIRARLKGAAVS---RGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC-PIIDVISDDTFEYMAGSDMTYGGFNWK 175 (472)
T ss_dssp C-HHHHHHHHHHHC---CSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE-EEEEEECSSSCCEECCCTTEEEEECTT
T ss_pred C-hHHHHHHHHHhc---cCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE-eeeeeEcCCCceeccCCCcccceeecc
Confidence 4 999999999999 99999999999999999999999999888877654 34333332210000 000 00000
Q ss_pred hhhhh------h--hhcc--ccCCCcccccccceeeeHHHHHHcCCCCCCCc---cchHHHHHHHHhCCCeEEEeccccc
Q 009761 239 YHFTV------E--QEVG--SSTYAFFGFNGTAGVWRISALNEAGGWKDRTT---VEDMDLAVRASLKGWKFVYVGDLKV 305 (526)
Q Consensus 239 ~~~~~------~--~~~~--~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~---~ED~~l~~rl~~~G~~~~~~~~~~~ 305 (526)
..+.. . .... ........+.|+++++||++++++|||++... .||.|+++|+.+.|+++.++|.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v 255 (472)
T 1xhb_A 176 LNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHV 255 (472)
T ss_dssp CCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEE
T ss_pred ceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEE
Confidence 00000 0 0000 00111223668899999999999999999763 7999999999999999999999988
Q ss_pred cccCCcC-------------hHHHHHHHHhhhcchHHHHHhhcc
Q 009761 306 KNELPST-------------FKAYRYQQHRWSCGPANLFKKMVG 336 (526)
Q Consensus 306 ~~~~p~t-------------~~~~~~Qr~RW~~G~~~~~~~~~~ 336 (526)
.|....+ .+...+...+|..+..+.+..+.+
T Consensus 256 ~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p 299 (472)
T 1xhb_A 256 GHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISP 299 (472)
T ss_dssp EEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHTST
T ss_pred EEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 7644332 234556667899888776655433
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.93 E-value=9.5e-27 Score=222.79 Aligned_cols=215 Identities=14% Similarity=0.160 Sum_probs=150.9
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC-------CC
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS-------RN 163 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~-------~~ 163 (526)
|+|||+||+||+++.+++||+|+++|+||+.+ +|+|+|+|+|+|.+ +++++. . ..+++++..+. .+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~e-iivvDd~S~d~t~~-~~~~~~----~-~~~i~~i~~~~~~~~~~~~n 73 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFE-LFIMDDNSNEETLN-VIRPFL----N-DNRVRFYQSDISGVKERTEK 73 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEE-EEEEECSCCHHHHH-HHGGGG----G-STTEEEEECCCCSHHHHHSS
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCceE-EEEEECCCCchHHH-HHHHHh----h-cCCEEEEecccccccccccc
Confidence 68999999999999999999999999998533 34466778898876 444332 2 46788885541 35
Q ss_pred CCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEe--cCCCcHHHHHHHHhhhhhh
Q 009761 164 GYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFV--NADECLMTRMQEMSLDYHF 241 (526)
Q Consensus 164 g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~ 241 (526)
.|++.|+|.|++.+ ++|||+++|+|+.++|++|++++..++++|++++|++..... +.+...... ..
T Consensus 74 ~G~~~a~N~gi~~a---~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--------~~ 142 (255)
T 1qg8_A 74 TRYAALINQAIEMA---EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKE--------TV 142 (255)
T ss_dssp CHHHHHHHHHHHHC---CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEE--------EE
T ss_pred cCHHHHHHHHHHHc---CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhh--------cc
Confidence 56999999999999 999999999999999999999999998889999999988765 432211000 00
Q ss_pred hhhhhccccCCCcccccccceeeeHHHHHHcC-CC------CC-CCccchHHHHHHHHhCCCeEEEecccccccc-CCcC
Q 009761 242 TVEQEVGSSTYAFFGFNGTAGVWRISALNEAG-GW------KD-RTTVEDMDLAVRASLKGWKFVYVGDLKVKNE-LPST 312 (526)
Q Consensus 242 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~g-g~------~~-~~~~ED~~l~~rl~~~G~~~~~~~~~~~~~~-~p~t 312 (526)
........ .......|+++++||++++++| || ++ ....||.+++.|+.+.| ++.++|++.+.+. .+.+
T Consensus 143 ~~~~~~~~--~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~~~s 219 (255)
T 1qg8_A 143 RPAAQVTW--NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELDLNYITDQS 219 (255)
T ss_dssp ECCCSCBS--CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC---
T ss_pred CchHHHHH--hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEEEEEEcCCc
Confidence 00000000 1223366889999999999998 78 44 33789999999999988 7999999887532 3444
Q ss_pred hHH--HHHHHHhhhcc
Q 009761 313 FKA--YRYQQHRWSCG 326 (526)
Q Consensus 313 ~~~--~~~Qr~RW~~G 326 (526)
... ..+++.+|.+.
T Consensus 220 ~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 220 IHFQLFELEKNEFVRN 235 (255)
T ss_dssp -----------CTGGG
T ss_pred cchhHHHHHHHHHHHh
Confidence 433 33555555544
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.93 E-value=6e-25 Score=237.64 Aligned_cols=220 Identities=20% Similarity=0.249 Sum_probs=161.3
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
+..|+|||+||+|||++.+.++|+|+.+|+++....+|+|+|+|+|++.+ +++++. ...+++++..++...|++
T Consensus 90 ~~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~-~~~~~~-----~~~~i~~i~~~~~~~g~~ 163 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEE-IVREFE-----SLLNIKYVRQKDYGYQLC 163 (625)
T ss_dssp CCCCCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHH-HHHTTT-----TTSCEEEEEECCCSCCHH
T ss_pred ccCCcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHH-HHHHhh-----hcCCeEEEEeCCCCcchh
Confidence 34589999999999999999999999999887544455566778888766 554331 125688887666555799
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhh--------
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDY-------- 239 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~-------- 239 (526)
+|+|.|++.+ ++|||+++|+|+.++|++|++++..++++|+++++++.....+................
T Consensus 164 ~a~N~g~~~a---~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (625)
T 2z86_A 164 AVRNLGLRAA---KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITN 240 (625)
T ss_dssp HHHHHHHHHC---CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC----
T ss_pred HHHHHHHHhC---CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccC
Confidence 9999999999 99999999999999999999999999888999888887665444322222111000000
Q ss_pred ------------------hhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCc---cchHHHHHHHHhCCCeEE
Q 009761 240 ------------------HFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTT---VEDMDLAVRASLKGWKFV 298 (526)
Q Consensus 240 ------------------~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~---~ED~~l~~rl~~~G~~~~ 298 (526)
.+...............+.|+++++||++++++|||++... .||.|++.|+.++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~ 320 (625)
T 2z86_A 241 NQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFR 320 (625)
T ss_dssp -----------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEE
T ss_pred CchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEE
Confidence 00000001111122233679999999999999999999763 699999999999999999
Q ss_pred EeccccccccCCcChHHH
Q 009761 299 YVGDLKVKNELPSTFKAY 316 (526)
Q Consensus 299 ~~~~~~~~~~~p~t~~~~ 316 (526)
++|++.++|..|.+....
T Consensus 321 ~~p~~~v~H~~~~~~~~~ 338 (625)
T 2z86_A 321 SVEGAMAYHQEPPGKENE 338 (625)
T ss_dssp ECGGGCEEEECCC-----
T ss_pred EcccchhhccCCccccch
Confidence 999999998888765433
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.92 E-value=6.1e-25 Score=233.80 Aligned_cols=237 Identities=14% Similarity=0.094 Sum_probs=166.9
Q ss_pred CCCCcEEEEEecCCCh-HHHHHHHHHHHcCCCCCCc-eEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCC
Q 009761 88 SAYPMVLVQIPMYNEK-EVYQLSIGAACGLSWPSDR-ITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGY 165 (526)
Q Consensus 88 ~~~P~VsViIp~yne~-~~l~~~L~sl~~q~yp~~~-~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 165 (526)
++.|+||||||+|||+ +.+.++|+|+++|+||+.. ++|+|+|+|+|++..+++++++++ ..++++++.+++ .|
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~----~~~v~vi~~~~n-~G 183 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMAL----FPSVRILRTKKR-EG 183 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTT----STTEEEEECSSC-CC
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHh----CCeEEEEECCCC-CC
Confidence 5679999999999999 9999999999999998642 345566779999933366655444 357888855444 45
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHH--H--HHHhhh--h
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTR--M--QEMSLD--Y 239 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~--~--~~~~~~--~ 239 (526)
++.|+|.|++.| ++|||+++|+|+.++|++|++++..+++++++ +|++.....+.+...... . ....+. .
T Consensus 184 ~~~A~N~G~~~A---~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (570)
T 2d7i_A 184 LIRTRMLGASVA---TGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWEM 259 (570)
T ss_dssp HHHHHHHHHHHC---CSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSCEEEECTTC
T ss_pred HHHHHHHHHHhc---CCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCcccccccccc
Confidence 999999999999 99999999999999999999999999777765 555555444432100000 0 000000 0
Q ss_pred hhhhhh-----hcc--ccCCCcccccccceeeeHHHHHHcCCCCCCCc---cchHHHHHHHHhCCCeEEEeccccccccC
Q 009761 240 HFTVEQ-----EVG--SSTYAFFGFNGTAGVWRISALNEAGGWKDRTT---VEDMDLAVRASLKGWKFVYVGDLKVKNEL 309 (526)
Q Consensus 240 ~~~~~~-----~~~--~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~---~ED~~l~~rl~~~G~~~~~~~~~~~~~~~ 309 (526)
.+.... ... ........+.|+++++||++++++|||++... .||.|+++|+.+.|+++.++|.+.++|..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~ 339 (570)
T 2d7i_A 260 YYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIY 339 (570)
T ss_dssp CEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECC
T ss_pred cccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEc
Confidence 000000 000 00111223669999999999999999999663 79999999999999999999999887642
Q ss_pred ----CcC-------hHHHHHHHHhhhcchHHHHHh
Q 009761 310 ----PST-------FKAYRYQQHRWSCGPANLFKK 333 (526)
Q Consensus 310 ----p~t-------~~~~~~Qr~RW~~G~~~~~~~ 333 (526)
|.+ .+...+-..+|.....+.+.+
T Consensus 340 r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~ 374 (570)
T 2d7i_A 340 RKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQ 374 (570)
T ss_dssp CSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHT
T ss_pred cccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 211 345555667898887765543
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.91 E-value=6.6e-24 Score=223.10 Aligned_cols=209 Identities=16% Similarity=0.115 Sum_probs=149.4
Q ss_pred CCCCCcEEEEEecCCChH-HHHHHHHHHHcCCCCCC-ceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCC
Q 009761 87 NSAYPMVLVQIPMYNEKE-VYQLSIGAACGLSWPSD-RITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNG 164 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~-~l~~~L~sl~~q~yp~~-~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 164 (526)
+++.|.||||||+|||++ .+.++|+|+++|++|+. .++|+|+|+|+|++.+... + ...++++++.+++ .
T Consensus 62 ~~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~----~----~~~~v~vi~~~~n-~ 132 (501)
T 2ffu_A 62 RVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL----G----KIEKVRVLRNDRR-E 132 (501)
T ss_dssp CSSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG----G----GBTTEEEEECSSC-C
T ss_pred CcCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH----h----cCCCEEEEECCCC-c
Confidence 456899999999999997 99999999999999864 2345466779998865332 1 2357888855544 4
Q ss_pred CCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHH---HH--HHHhhhh
Q 009761 165 YKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMT---RM--QEMSLDY 239 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~---~~--~~~~~~~ 239 (526)
|++.|+|.|++.| ++|||+++|+|+.++|++|++++..+++++. ++|++.....+.+.-... .. .......
T Consensus 133 G~~~A~N~G~~~A---~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (501)
T 2ffu_A 133 GLMRSRVRGADAA---QAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVINMDNFQYVGASADLKGGFDWNL 208 (501)
T ss_dssp HHHHHHHHHHHHC---CSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEECTTTCCEECBCSSEEEEECTTC
T ss_pred CHHHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCcCCCceeecCCcccceEeeecC
Confidence 5999999999999 9999999999999999999999999976665 467666544433210000 00 0000000
Q ss_pred hh------hhhhhcc--c--cCCCcccccccceeeeHHHHHHcCCCCCCCc---cchHHHHHHHHhCCCeEEEecccccc
Q 009761 240 HF------TVEQEVG--S--STYAFFGFNGTAGVWRISALNEAGGWKDRTT---VEDMDLAVRASLKGWKFVYVGDLKVK 306 (526)
Q Consensus 240 ~~------~~~~~~~--~--~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~---~ED~~l~~rl~~~G~~~~~~~~~~~~ 306 (526)
.+ ......+ . .......+.|+++++||++++++|||++... .||.|+++|+.+.|+++.++|++.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~ 288 (501)
T 2ffu_A 209 VFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVG 288 (501)
T ss_dssp CEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEE
Confidence 00 0000000 0 0011123568899999999999999999653 89999999999999999999999887
Q ss_pred cc
Q 009761 307 NE 308 (526)
Q Consensus 307 ~~ 308 (526)
|.
T Consensus 289 H~ 290 (501)
T 2ffu_A 289 HV 290 (501)
T ss_dssp EC
T ss_pred EE
Confidence 65
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.91 E-value=2.6e-24 Score=232.68 Aligned_cols=224 Identities=15% Similarity=0.154 Sum_probs=165.4
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
...|.|||+||+||+++.+++||+|+++|+|++.+ +|+|+|+|+|+|.+ ++++..++ ..++++++ +++.|++
T Consensus 372 ~~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~e-iivvdd~S~d~t~~-~~~~~~~~----~~~i~~~~--~~n~G~~ 443 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLE-VCICDDGSTDDTLR-ILQEHYAN----HPRVRFIS--QKNKGIG 443 (625)
T ss_dssp CSSCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEE-EEEEEESCSSSHHH-HHHHHHTT----CTTEEEEE--ECCCCHH
T ss_pred ccCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeE-EEEEECcCChhHHH-HHHHHHhh----CCcEEEEe--CCCCCHH
Confidence 34689999999999999999999999999998644 44477789999877 55544333 45788874 3455699
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhc
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEV 247 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (526)
+|+|.|++.+ ++|||+++|+|+.++|++|++++..++++|++++|++.....+.+........ ... .+.....
T Consensus 444 ~a~n~g~~~a---~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~- 516 (625)
T 2z86_A 444 SASNTAVRLC---RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGY--NWP-IYSREKL- 516 (625)
T ss_dssp HHHHHHHHHC---CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECC--CCS-SCCHHHH-
T ss_pred HHHHHHHHhc---CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCc--ccc-cCCHHHH-
Confidence 9999999999 99999999999999999999999999889999999998776655432211000 000 0000000
Q ss_pred cccCCCcccccccceeeeHHHHHHcCCCCCCC-ccchHHHHHHHHhCCCeEEEecccccc---ccCCcChHHHHHHHHhh
Q 009761 248 GSSTYAFFGFNGTAGVWRISALNEAGGWKDRT-TVEDMDLAVRASLKGWKFVYVGDLKVK---NELPSTFKAYRYQQHRW 323 (526)
Q Consensus 248 ~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~-~~ED~~l~~rl~~~G~~~~~~~~~~~~---~~~p~t~~~~~~Qr~RW 323 (526)
. ...+.|+++++||++++++|||++.. ..||+|++.|+.+.| ++.++|+...+ +....+.+...+|+.+|
T Consensus 517 ~-----~~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~~~s~~~~~~~~~~~ 590 (625)
T 2z86_A 517 T-----SAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENH 590 (625)
T ss_dssp T-----TSCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC----CCSSHHHHHHHH
T ss_pred h-----hcccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCCccchhhHHHHHHHH
Confidence 0 11256889999999999999999863 689999999999999 99999998765 44455666666676666
Q ss_pred hcchHHHHH
Q 009761 324 SCGPANLFK 332 (526)
Q Consensus 324 ~~G~~~~~~ 332 (526)
.+...+.++
T Consensus 591 ~~~~~~~l~ 599 (625)
T 2z86_A 591 FKVVNESLS 599 (625)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 655444443
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.89 E-value=1e-23 Score=226.04 Aligned_cols=230 Identities=15% Similarity=0.124 Sum_probs=156.4
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCc--eEEEEEcCCCchh-HHHHHHHHHHHhhccCCcEEEEeeCCCCC
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDR--ITIQVLDDSTDPT-IKDLVELECQRWASKGINIKYEIRDSRNG 164 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~--~~I~V~D~s~D~t-~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 164 (526)
...|+|||+||+||+++.+.+||+|+.+|+|+.+. .+|+|+|+|+|++ .....+...+. +.+++++.. + +.
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~----~~~I~vI~~-~-N~ 250 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARL----GSRLSIHDQ-P-NL 250 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHH----GGGEEEEEC-C-CC
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhc----CCCEEEEEC-C-CC
Confidence 34689999999999999999999999999983222 2344556677743 12122222222 357888854 3 55
Q ss_pred CCccHHHHHhhhhccc-CCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCc------HHHH--H---
Q 009761 165 YKAGALKEGMKHSYVK-QCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADEC------LMTR--M--- 232 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~-~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~------~~~~--~--- 232 (526)
|.+++.|.|++.|... ++|||+++|+|++++||+|++++..++.++++++|++.....+.... +... .
T Consensus 251 G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~ 330 (657)
T 4fix_A 251 GGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWT 330 (657)
T ss_dssp HHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccc
Confidence 6899999999998543 57999999999999999999999999888899998877654332210 0000 0
Q ss_pred --HHHhhhhhhh---h-----hhhccccCCCcccccccceeeeHHHHHHcCCCCCC-CccchHHHHHHHHhCCCeEEEec
Q 009761 233 --QEMSLDYHFT---V-----EQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDR-TTVEDMDLAVRASLKGWKFVYVG 301 (526)
Q Consensus 233 --~~~~~~~~~~---~-----~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~-~~~ED~~l~~rl~~~G~~~~~~~ 301 (526)
....+...+. . ...............|+++++||++++++||+++. ...||.|+++|+.++||++.++|
T Consensus 331 ~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 331 AAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLP 410 (657)
T ss_dssp ECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEEC
Confidence 0000000000 0 00000111222346789999999999999999863 25799999999999999999999
Q ss_pred cccccccCCcC------hHHHHHHHHhh
Q 009761 302 DLKVKNELPST------FKAYRYQQHRW 323 (526)
Q Consensus 302 ~~~~~~~~p~t------~~~~~~Qr~RW 323 (526)
++.++|....+ ++.++..|.|+
T Consensus 411 ~a~V~H~~~~~~~~~s~~r~Yy~~RN~l 438 (657)
T 4fix_A 411 GAAIWHMAWSDKDDAIDWQAYFHLRNRL 438 (657)
T ss_dssp EEEEEECCSSSSCCTTSTHHHHHHHHHH
T ss_pred CEEEEEcCcCccccccHHHHHHHHHHHH
Confidence 99998755432 45555555543
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.89 E-value=1.3e-22 Score=201.36 Aligned_cols=208 Identities=16% Similarity=0.028 Sum_probs=140.2
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA 167 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~ 167 (526)
...|+|||+||+|||++.++++|+|+.+|+||...++|+|+|+|+|+|.+ ++++...+. ..+++++.+.+.+.||+
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~-~~~~~~~~~---~~~~~~~~~~~~n~G~~ 120 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEI-RAVAAGARV---VSREQALPEVPIRPGKG 120 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHH-HHHHTTCEE---EEHHHHCTTSCCCCSHH
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHH-HHHHhhhhh---ccceeeeccCCCCCCHH
Confidence 34589999999999999999999999999998644455577789999877 444321100 00111121245566799
Q ss_pred cHHHHHhhhhcccCCcEEEEecCCCC-CChHHHHHHHhhhhcCCCEEEEeeEEEEecC-C-------CcHHHHHHHHhhh
Q 009761 168 GALKEGMKHSYVKQCDYVAIFDADFE-PEPDFLWRTIPFLVHNPDIALVQARWKFVNA-D-------ECLMTRMQEMSLD 238 (526)
Q Consensus 168 ~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~-~-------~~~~~~~~~~~~~ 238 (526)
.|+|.|++.+ ++|||+++|+|+. ++|++|++++..+.++|++++|+|....... + .....+.......
T Consensus 121 ~a~n~g~~~a---~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (329)
T 3ckj_A 121 EALWRSLAAS---RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVAR 197 (329)
T ss_dssp HHHHHHHHHC---CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHH
T ss_pred HHHHHHHHhC---CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHH
Confidence 9999999999 9999999999999 8999999999997688999999997653221 0 0111111111000
Q ss_pred hhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHHh-CCCe-EEEeccccccc
Q 009761 239 YHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASL-KGWK-FVYVGDLKVKN 307 (526)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~~-~G~~-~~~~~~~~~~~ 307 (526)
..+... ...........|++.++||++++++| |+++ ..||.++..++.+ .|++ +..+|...-.+
T Consensus 198 ~~~~~~---~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~~-~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 198 PLLAAL---RPELGCILQPLGGEYAATRELLTSVP-FAPG-YGVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp HHHHHH---CGGGGGCSCTTCSCEEEEHHHHTTSC-BCCG-GGHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred HHHHHh---hhhhccccCCCccceeeeHHHHHhCC-CCCC-CcccHHHHHHHHHhcCCccEeeecceEEec
Confidence 000000 01111222345778899999999996 7654 5699999999986 6775 77776544333
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.83 E-value=2.1e-22 Score=220.92 Aligned_cols=199 Identities=17% Similarity=0.158 Sum_probs=0.0
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHH
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGAL 170 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~al 170 (526)
|+|||+||+||+++.|++||+|+++|+|++.++ |+|+|+|+|+|.+ ++++..+++ +.+++++..+ .+.|.++|+
T Consensus 2 p~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EI-IVVDDgStD~t~~-il~~~~~~~---~~~i~~i~~~-~n~G~~~ar 75 (729)
T 3l7i_A 2 NKLTIIVTYYNAEEYITGCLESIKQQRTQDFNL-IIVNDGSTDQSKK-LMDEAIKDY---DKNIRFIDLD-ENSGHAHAR 75 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEE-EEEECCCCCcHHH-HHHHHHHhC---CCCEEEEECC-CCCCHHHHH
Confidence 689999999999999999999999999996543 4477779998877 666554443 3467777444 345599999
Q ss_pred HHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhcccc
Q 009761 171 KEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSS 250 (526)
Q Consensus 171 n~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (526)
|.|++.| +||||+++|+|+.++|++|++++..++ ++++ +.+.....+.+.............. .........
T Consensus 76 N~gi~~A---~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~--v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 147 (729)
T 3l7i_A 76 NIALEEV---ETPYFMFLDADDELASYAITFYLEKFN-NTDG--LIAPIHSFTTQRPQFVDLDRVRVEY-FNAKENINS- 147 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhc---cCCEEEEECCCCCCChhHHHHHHHHhc-CCCE--EEEeeEEeecCCCccccccceeeee-ecchhhHHH-
Confidence 9999999 999999999999999999999999995 4443 3333332222211111111111000 000000001
Q ss_pred CCCcccccccceeeeHHHHHHcC-CCCCCC-ccchHHHHHHHHhCCCeEEEe-ccccc
Q 009761 251 TYAFFGFNGTAGVWRISALNEAG-GWKDRT-TVEDMDLAVRASLKGWKFVYV-GDLKV 305 (526)
Q Consensus 251 ~~~~~~~~G~~~~~Rr~~l~~~g-g~~~~~-~~ED~~l~~rl~~~G~~~~~~-~~~~~ 305 (526)
......++++++||++++++| +|++.. ..||.+++.|+..+|+++.++ ++...
T Consensus 148 --~~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~ 203 (729)
T 3l7i_A 148 --FLRKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFY 203 (729)
T ss_dssp ----------------------------------------------------------
T ss_pred --HhhccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEE
Confidence 111245778999999999999 899874 889999999999999999999 55544
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.83 E-value=1.3e-19 Score=182.17 Aligned_cols=197 Identities=14% Similarity=0.066 Sum_probs=139.1
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHHc--CCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEe------eC
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAACG--LSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEI------RD 160 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~~--q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~------~~ 160 (526)
..|+|||+||+|||++.|+++|+|+.+ |+||....+|+|+|+|+|+|.+ ++++. + .+++. +.
T Consensus 92 ~~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~-i~~~~-------~--~~v~~~~~~~i~~ 161 (387)
T 3f1y_A 92 LGLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAG-VAASH-------G--AEVYSENELMSGY 161 (387)
T ss_dssp HTCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHH-HHHHT-------T--CEEEEGGGTTGGG
T ss_pred CCCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHH-HHHHh-------C--chhcccceeEecC
Confidence 358999999999999999999999987 5676444556677889999987 54432 1 22222 23
Q ss_pred CCCCCCccHHHHHhhhhcccCCcEEEEecCCCC-CChHHHHHHHhhhhcCCCEEEEeeEEEEecC--------CCcHHHH
Q 009761 161 SRNGYKAGALKEGMKHSYVKQCDYVAIFDADFE-PEPDFLWRTIPFLVHNPDIALVQARWKFVNA--------DECLMTR 231 (526)
Q Consensus 161 ~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~--------~~~~~~~ 231 (526)
.++.||+.|+|.|++.+ ++|||+++|+|+. ++|++|.+++..++++|++++|.|....... ..+...+
T Consensus 162 ~~n~G~g~A~n~G~~~A---~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~ 238 (387)
T 3f1y_A 162 GDAHGKGDAMWRALSVT---RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTE 238 (387)
T ss_dssp CSCCSHHHHHHHHTTTC---CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHH
T ss_pred CccCCHHHHHHHHHHhc---CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhh
Confidence 34667999999999999 9999999999999 8999999999999788899999987542211 1122222
Q ss_pred HHH-HhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCccchHHHHHHHH-hCCCe-EEEeccccccc
Q 009761 232 MQE-MSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRAS-LKGWK-FVYVGDLKVKN 307 (526)
Q Consensus 232 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~l~~rl~-~~G~~-~~~~~~~~~~~ 307 (526)
... ..+...+. .........|++.++||++++++ +|++ ...+|.++..++. +.|++ +..+|-....+
T Consensus 239 ~~~~~l~~~~~~-------~l~~~~d~~sG~~a~rR~~l~~i-~f~~-gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h 308 (387)
T 3f1y_A 239 LTAKPLFNLFYP-------ELAGFVQPLAGEFVADRELFCSI-PFLT-GYAVETGIMIDVLKKVGLGAMAQVDLGERQN 308 (387)
T ss_dssp HTHHHHHHHHCG-------GGTTCSCTTCSCEEEEHHHHTTS-CEEC-STTHHHHHHHHHHHHHCGGGEEEEEEEECCC
T ss_pred hhHHHHHHHHhH-------hhccccccccccEEEEHHHHHhC-CCCC-CcchHHHHHHHHHHhcCCCeEEEEecceeec
Confidence 111 11111100 01112223467899999999999 6754 4778999998885 56987 98888665433
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.79 E-value=4.7e-20 Score=177.81 Aligned_cols=179 Identities=16% Similarity=0.163 Sum_probs=126.7
Q ss_pred CCCcEEEEEecCCChHHHHHHHHHHH---cCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCC
Q 009761 89 AYPMVLVQIPMYNEKEVYQLSIGAAC---GLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGY 165 (526)
Q Consensus 89 ~~P~VsViIp~yne~~~l~~~L~sl~---~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 165 (526)
..|+||||||+||+++.|+++|+|+. +|++++ .+|+|+||++|.. -+
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~--~EIiVVdds~d~~----------------------------f~ 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLD--YGIYVINQAGDTI----------------------------FN 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCE--EEEEEEEECSSSC----------------------------CC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeCCCCc----------------------------cc
Confidence 35899999999999999999999999 677775 4566677655521 03
Q ss_pred CccHHHHHh----hhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhh
Q 009761 166 KAGALKEGM----KHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHF 241 (526)
Q Consensus 166 K~~aln~gl----~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (526)
++.++|.|+ +.| ++||++++|+|++++||+... .....|+. ... .... +.
T Consensus 113 ~a~a~N~G~~~al~~A---~gd~i~flD~D~i~~~d~~~~---~~~~~p~~---------~~~---~~~~-----~~--- 166 (287)
T 2fy7_A 113 RAKLLNVGFQEALKDY---DYTCFVFSDVDLIPMNDHNAY---RCFSQPRH---------ISV---AMDK-----FG--- 166 (287)
T ss_dssp HHHHHHHHHHHHHHHS---CCCEEEEECTTEEESBTTSCC---SCCSSCEE---------CCC---EEGG-----GT---
T ss_pred hhhhhhhHHHHHHHhC---CCCEEEEECCCcccCCCcceE---ecCCCCce---------EEE---eecc-----cc---
Confidence 678899999 777 999999999999999996210 00011211 000 0000 00
Q ss_pred hhhhhccccCCCcccccccceeeeHHHHHHcCCCCCCCc---cchHHHHHHHHhCCCeEEEecc-----cccc-------
Q 009761 242 TVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTT---VEDMDLAVRASLKGWKFVYVGD-----LKVK------- 306 (526)
Q Consensus 242 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~---~ED~~l~~rl~~~G~~~~~~~~-----~~~~------- 306 (526)
. ... ...+.|+++++||++++++|||++... .||.|++.|+.++|+++...+. ...+
T Consensus 167 -~----~~~---~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~ 238 (287)
T 2fy7_A 167 -F----SLP---YVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKN 238 (287)
T ss_dssp -T----SCS---STTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC-------
T ss_pred -c----CCC---cCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCccc
Confidence 0 000 113568999999999999999999753 5999999999999999884432 2222
Q ss_pred ccCCcChHHHHHHHHhhhcchHHHH
Q 009761 307 NELPSTFKAYRYQQHRWSCGPANLF 331 (526)
Q Consensus 307 ~~~p~t~~~~~~Qr~RW~~G~~~~~ 331 (526)
...|..++...+|+.||.++.++.+
T Consensus 239 ~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 239 EPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp --CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred CCCHHHHHHHhhcccEEcCCCcccC
Confidence 2356778889999999999987654
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.78 E-value=6.6e-19 Score=167.47 Aligned_cols=183 Identities=10% Similarity=0.005 Sum_probs=120.6
Q ss_pred CCCCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcC-CCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCC
Q 009761 88 SAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDD-STDPTIKDLVELECQRWASKGINIKYEIRDSRNGYK 166 (526)
Q Consensus 88 ~~~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~-s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K 166 (526)
+..|.+||| |+||+++.+++||+|+.+.-......+|+|+|| |+|. .|.
T Consensus 13 ~~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~-----------------------------~g~ 62 (249)
T 2nxv_A 13 ESTLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ-----------------------------FHG 62 (249)
T ss_dssp CCCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS-----------------------------CCT
T ss_pred CCcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc-----------------------------ccH
Confidence 445789974 679999999999997764211111145556666 4331 236
Q ss_pred ccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhc----CCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhh
Q 009761 167 AGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH----NPDIALVQARWKFVNADECLMTRMQEMSLDYHFT 242 (526)
Q Consensus 167 ~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~----~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (526)
+.|+|.|++.| +|||++++|+|+.++|++|++++..+++ +|++++++......+...... ... .......
T Consensus 63 a~a~N~Gi~~A---~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~-~~~--~~~~~~~ 136 (249)
T 2nxv_A 63 FSWHKQMLPRC---KGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV-TAQ--ALHISDV 136 (249)
T ss_dssp TTHHHHHGGGC---CSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS-CCC--EEEEEET
T ss_pred HHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee-eec--ccccCCc
Confidence 88999999999 9999999999999999999999999865 599988865433222111000 000 0000000
Q ss_pred h--hhhccccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEeccccccccCC
Q 009761 243 V--EQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDLKVKNELP 310 (526)
Q Consensus 243 ~--~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~~~~~~p 310 (526)
. ....+..........|+++++||++ .||||+.. ..||.|+++|+.++|+++.+.|.. ++|...
T Consensus 137 ~~~~~~~~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~-v~H~~~ 205 (249)
T 2nxv_A 137 FGNDRRRGNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFH-LHHYGR 205 (249)
T ss_dssp TEEEEEESCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCC-CEECCC
T ss_pred cccccccCCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccE-EEECCC
Confidence 0 0000011111223578999999999 78999742 358999999999999999999865 555543
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.61 E-value=1.5e-14 Score=145.00 Aligned_cols=194 Identities=12% Similarity=0.087 Sum_probs=120.1
Q ss_pred EEEecCCChHHHHHHHHHHHc-CCCCCCceEEEEEcCCCchhHHHHHHHHHHHhh-ccCCcEEEEeeC--C-CCCCCccH
Q 009761 95 VQIPMYNEKEVYQLSIGAACG-LSWPSDRITIQVLDDSTDPTIKDLVELECQRWA-SKGINIKYEIRD--S-RNGYKAGA 169 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~-q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~-~~~~~v~~~~~~--~-~~g~K~~a 169 (526)
|+||+ ||+ .+..+++++.. +.+|..+ +|+|+|+|+|+|.+ ++++++++.+ ..+.++...... + .+.||+.|
T Consensus 4 VIiP~-~eE-~I~~vl~~l~~~~~~~~~E-IIVVDDGStD~T~e-ia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~A 79 (397)
T 2bo4_A 4 VVFPF-KHE-HPEVLLHNVRVAAAHPRVH-EVLCIGYERDQTYE-AVERAAPEISRATGTPVSVRLQERLGTLRPGKGDG 79 (397)
T ss_dssp EEEEC-CSS-CHHHHHHHHHHHHHSTTCC-EEEEEESSCCHHHH-HHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHH
T ss_pred EEEeC-Ccc-CHHHHHHHHHHhccCCCeE-EEEEECcCCccHHH-HHHHhhhhcccccCCeEEEEecccCCCCCCCHHHH
Confidence 45555 554 46777777642 3455443 45588889999988 6665555543 335555443212 2 15679999
Q ss_pred HHHHh----hhhcccCCcEEEEecCCCC-CChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHH-HHhhhhhhhh
Q 009761 170 LKEGM----KHSYVKQCDYVAIFDADFE-PEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQ-EMSLDYHFTV 243 (526)
Q Consensus 170 ln~gl----~~a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 243 (526)
++.|+ +.+ +||+++++|||.. .+|+++.+++..+++ +.++|.|... .....+...+.. .......+..
T Consensus 80 l~~G~~~Al~~a---~gd~vv~mDADlq~~~P~~i~~Ll~~l~~--g~D~V~g~~~-r~~~~~~~~~~~~~~ll~~~~~~ 153 (397)
T 2bo4_A 80 MNTALRYFLEET---QWERIHFYDADITSFGPDWITKAEEAADF--GYGLVRHYFP-RASTDAMITWMITRTGFALLWPH 153 (397)
T ss_dssp HHHHHHHHHHHC---CCSEEEECCTTCSSCCHHHHHHHHHHHHT--TCSEEEEECC-CCTTSCHHHHHTHHHHHHHHCTT
T ss_pred HHHHHHHHHHhC---CCCEEEEEcCCCCCCCHHHHHHHHHHHHc--CCCEEEEEec-cccCCcHHHHHHHHHHHHHHHHH
Confidence 99999 676 9999999999997 799999999998843 4777777422 111233322211 1101111111
Q ss_pred hhhccccCCCcccccccceeeeHHHHHHcCCC----CCCCccchHHHHHHHHhCCCeEEEeccc
Q 009761 244 EQEVGSSTYAFFGFNGTAGVWRISALNEAGGW----KDRTTVEDMDLAVRASLKGWKFVYVGDL 303 (526)
Q Consensus 244 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~----~~~~~~ED~~l~~rl~~~G~~~~~~~~~ 303 (526)
.+.. ... . ..++..++||++++++... .......|.++..++.++|+++..+|-.
T Consensus 154 ~~~~--~i~--d-p~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 154 TELS--WIE--Q-PLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp SSGG--GCS--C-TTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred hhcc--ccc--c-CCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 0100 111 1 1244568999999987321 2233567999999999999999988843
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.09 E-value=4e-10 Score=107.56 Aligned_cols=106 Identities=14% Similarity=0.014 Sum_probs=75.8
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHH--HHHHHHHHHhhccCCcEEEEeeCC------
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIK--DLVELECQRWASKGINIKYEIRDS------ 161 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~--~l~~~~~~~~~~~~~~v~~~~~~~------ 161 (526)
..++|||||||||+.. +++++++|.+.+ ..+|+|+|+|+|.+.. ++++.+++. .+.++.++|..+
T Consensus 52 ~~klSIVVPvYNEe~~---lLesVl~qi~~d-~eIIlVdDGS~D~s~~e~dil~~~~~~---~~~ri~viHQkn~gls~A 124 (391)
T 2wvl_A 52 LEQTAIVVPTRNERLK---LLEGVLSGIPHE-ALILVASNSSPDRFQMERDLLEEFAHL---TERPALIFHQKDPALAEA 124 (391)
T ss_dssp HTTEEEEEEESSCCHH---HHHHHHHTSCTT-SEEEEEECCCHHHHHHHHHHHHHHHHH---TTCCEEEEETTCHHHHHH
T ss_pred HhceEEEEeccCcHHH---HHHHHHhcCCCC-ceEEEEECCCCCChHhHHHHHHHHHhh---cccceEEEeccChHHHHH
Confidence 4689999999999974 699999998874 3455577888888842 244555542 245677776311
Q ss_pred ---------------CCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHH
Q 009761 162 ---------------RNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRT 202 (526)
Q Consensus 162 ---------------~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~l 202 (526)
.+.||+.++-.|+..|....+|||.|+|||..++.+..+.+
T Consensus 125 r~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyv 180 (391)
T 2wvl_A 125 LRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYV 180 (391)
T ss_dssp HHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHH
T ss_pred HHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHH
Confidence 12358888888888873337999999999999977655443
No 17
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.93 E-value=2.3e-09 Score=104.94 Aligned_cols=197 Identities=14% Similarity=0.100 Sum_probs=107.5
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeC--------CC
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRD--------SR 162 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~--------~~ 162 (526)
+.++|+|++||.++ ++++|+|+++|+.+.+..+|+|.||++++.++++++... .++.++..+ .+
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~-------~~I~~~~~~d~~~~~~~~~ 73 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYG-------SAVTHIRQPDLSNIAVQPD 73 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTG-------GGSEEEECSCCCCCCCCTT
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcC-------CceEEEEcCCccccccchh
Confidence 45789999999999 999999999998654444555666655544444555331 224333111 11
Q ss_pred CCCCc----------cHHHHHhhhhcccCCcEEEEecCCCCCChHHHHH---HHhhhhcCCCEEEEeeEEEEecCCCcHH
Q 009761 163 NGYKA----------GALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWR---TIPFLVHNPDIALVQARWKFVNADECLM 229 (526)
Q Consensus 163 ~g~K~----------~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~---lv~~~~~~~~v~~V~~~~~~~~~~~~~~ 229 (526)
+.|-+ .++|.+++.+ ++|+++++|+|++++||+++- +++.++.|+++..+++. |.+...
T Consensus 74 N~g~~~y~~ia~h~~~al~~vf~~~---~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~----n~~g~~- 145 (343)
T 1fo8_A 74 HRKFQGYYKIARHYRWALGQIFHNF---NYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW----NDNGKE- 145 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHTTS---CCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC----CTTCBG-
T ss_pred hcCcccchhHhHHHHHHHHHHHHhc---cCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecc----cCcccc-
Confidence 11111 3566666666 899999999999999998855 45556789999887654 221110
Q ss_pred HHHHHHhhhhhhhhhhhccccCCCcccccccceeeeHHHHHHcC-CCCCCCccchHHHHHH--HHhCCCeEEEecccc-c
Q 009761 230 TRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAG-GWKDRTTVEDMDLAVR--ASLKGWKFVYVGDLK-V 305 (526)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~g-g~~~~~~~ED~~l~~r--l~~~G~~~~~~~~~~-~ 305 (526)
.. ............-.++|-+-+..|++++++. .|+. ++.+..+| ..++|. ....|+.- +
T Consensus 146 ~~-----------~~~~~~~~lyrs~~f~~wGWa~wr~~W~e~~~~wp~----~~Wd~w~r~~~~~~~r-~ci~P~vsrv 209 (343)
T 1fo8_A 146 QM-----------VDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPK----AFWDDWMRRPEQRKGR-ACVRPEISRT 209 (343)
T ss_dssp GG-----------SCTTCTTCEEEESSCCCSSEEEEHHHHHHHGGGCCS----SCHHHHHTSHHHHTTC-EEEEESSBSE
T ss_pred cc-----------ccccCcceEEeecCCCchhhhhcHHHHHHHhhhcch----hHHHHHHHHHHHhCCC-EEEEecccee
Confidence 00 0000000001111245677899999998863 2333 23444433 355664 44556543 3
Q ss_pred cc--cCCcChHHHHHH
Q 009761 306 KN--ELPSTFKAYRYQ 319 (526)
Q Consensus 306 ~~--~~p~t~~~~~~Q 319 (526)
.+ +.-.+...+++|
T Consensus 210 ~n~G~~G~~~~~f~~~ 225 (343)
T 1fo8_A 210 MTFGRKGVSHGQFFDQ 225 (343)
T ss_dssp EECC------------
T ss_pred EeccccCcchhHHHHH
Confidence 33 333344444433
No 18
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.92 E-value=6.2e-09 Score=102.54 Aligned_cols=105 Identities=19% Similarity=0.123 Sum_probs=70.0
Q ss_pred CcEEEEEecCCChHH-HHHHHHHHHcCCCCCCceEEEEEcCCCchh------HHHHHHHHHHHhhccCCcEEEEeeCC--
Q 009761 91 PMVLVQIPMYNEKEV-YQLSIGAACGLSWPSDRITIQVLDDSTDPT------IKDLVELECQRWASKGINIKYEIRDS-- 161 (526)
Q Consensus 91 P~VsViIp~yne~~~-l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t------~~~l~~~~~~~~~~~~~~v~~~~~~~-- 161 (526)
.++||+||||||+.. +...+..+ .+ ...+|+|+|+|+|+| .+ +++..++.. .....+++..+
T Consensus 51 ~~iSVVIP~yNEE~~lI~~vL~~i---~~--~~eIIvVDDgSrD~tD~~~~~~~-~l~~~~~~~---~~~~~Vl~~~~p~ 121 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHLVDGVLKAI---PH--KCPIIIVSNSKREGPNRYKLEVD-LIRHFYNLT---HSKIIMIHQKDPG 121 (394)
T ss_dssp TTEEEEEEESSCCHHHHHHHHHHS---CT--TSCEEEEECCCCSSSCHHHHHHH-HHHHHHHHH---CCCEEEEETTCHH
T ss_pred CCEEEEEecCcccHHHHHHHHHcC---CC--CcEEEEEECcCcccccchhhHHH-HHHHHhhcc---ccceEEEecCCcc
Confidence 469999999999964 33333332 22 335666778886665 33 444444332 23445554433
Q ss_pred --------------------CCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 162 --------------------RNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 162 --------------------~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
++ ||+.|+-.|+..|...++|+|+++|||. ..|..+.+.+..+
T Consensus 122 v~~~~~~~g~~~il~~~~~~r~-GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy 184 (394)
T 2zu9_A 122 LAKAFKEVGYTDILDENGMIRS-GKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDY 184 (394)
T ss_dssp HHHHHHHHTCCTTBCTTSSBCC-SHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHH
T ss_pred hhHHhhhccccccccccccccC-ChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHh
Confidence 24 6999999999987334799999999999 6788887777655
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=98.15 E-value=5.5e-06 Score=76.82 Aligned_cols=179 Identities=16% Similarity=0.181 Sum_probs=114.0
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHH----cCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCC
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAAC----GLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGY 165 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~----~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 165 (526)
.-+|+||||-+|.++.+...|..+. +|.. ...|+|++..++ ..-.
T Consensus 50 ~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l---~y~I~VieQ~~~----------------------------~~FN 98 (287)
T 3lw6_A 50 VHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV---AHHIFVLNQVDR----------------------------FRFN 98 (287)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC---EEEEEEEEECSS----------------------------SCCC
T ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC---ceEEEEEecCCC----------------------------Cccc
Confidence 3489999999999987777775543 4532 244556654321 1112
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhh
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQ 245 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (526)
++..+|.|+..|. +..|++++-|.|-+|..|... + ..|+. .. +.+...+. ..+.+
T Consensus 99 Ra~LlNvGf~ea~-~~~d~~ifHDVDLlP~dd~n~----Y--~c~~~---~~-P~Hls~~~--------~~~~~------ 153 (287)
T 3lw6_A 99 RASLINVGFQFAS-DVYDYIAMHDVDLLPLNDNLL----Y--EYPSS---LG-PLHIAGPK--------LHPKY------ 153 (287)
T ss_dssp HHHHHHHHHHHSC-TTCCEEEEECTTEEECCTTSC----C--CCCCT---TC-CEESSCTT--------TCSSC------
T ss_pred hhheecccHHHHh-ccCCEEEEecccccccCCCcc----c--cCCCC---CC-ceEEeecc--------ccCCC------
Confidence 7788999999873 358999999999999765221 1 11110 01 11221110 00000
Q ss_pred hccccCCCcccccccceeeeHHHHHHcCCCCCCC---ccchHHHHHHHHhCCCeEEEeccc-ccc-------c-------
Q 009761 246 EVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRT---TVEDMDLAVRASLKGWKFVYVGDL-KVK-------N------- 307 (526)
Q Consensus 246 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~-~~~-------~------- 307 (526)
....+.|+.++++++.+.++|||++.. ..||.|+..|+...|+++.-.+.. ... +
T Consensus 154 -------~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~r 226 (287)
T 3lw6_A 154 -------HYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKR 226 (287)
T ss_dssp -------CCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCC
T ss_pred -------CcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCC
Confidence 011255889999999999999999965 579999999999999988765432 111 1
Q ss_pred cCCcChHHHHHHHHhhhcchHHHH
Q 009761 308 ELPSTFKAYRYQQHRWSCGPANLF 331 (526)
Q Consensus 308 ~~p~t~~~~~~Qr~RW~~G~~~~~ 331 (526)
+.|..+.....++.||..+.+..+
T Consensus 227 d~~k~~~~~~~~~~r~~~dGLnsl 250 (287)
T 3lw6_A 227 DTQKCFNQKEMTRKRDHKTGLDNV 250 (287)
T ss_dssp CCCCCTTHHHHHTSCCSSCSGGGC
T ss_pred cccchhhhhhhhcEEccCCCCeee
Confidence 223345566778888888777654
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=96.84 E-value=0.0018 Score=56.50 Aligned_cols=116 Identities=11% Similarity=0.029 Sum_probs=67.8
Q ss_pred CccHHHHHhhhhc-ccCCcEEEEecCC---CCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhh
Q 009761 166 KAGALKEGMKHSY-VKQCDYVAIFDAD---FEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHF 241 (526)
Q Consensus 166 K~~aln~gl~~a~-~~~~d~v~~lDaD---~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (526)
-..|+|..+..-. ..++|+++++||| ...+|+.+.+++. . +.++|.|.....+.+ . . ......+
T Consensus 37 I~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl~---~--g~DVV~GsYp~K~~~-~----~--s~~a~~y 104 (203)
T 2c0n_A 37 VAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKFN---E--GYDVVCGYYYLKTLR-G----Y--SVYRKDW 104 (203)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHHH---H--TCSEEEEECBCTTSS-S----B--SEESSSB
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHHh---C--CCCEEEEEeeccCCC-c----c--chHHHHH
Confidence 4445555554421 1378999999999 9999999999883 2 445666665332211 0 0 0000000
Q ss_pred hhhhhccccCCCcccccccceeeeHHHHHHcC--CC----C---CCCccchHHHHHHHHhCCCeE
Q 009761 242 TVEQEVGSSTYAFFGFNGTAGVWRISALNEAG--GW----K---DRTTVEDMDLAVRASLKGWKF 297 (526)
Q Consensus 242 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~g--g~----~---~~~~~ED~~l~~rl~~~G~~~ 297 (526)
... .. .......+++++++||++++.+- .| + .+..+||..++..+..+|+-+
T Consensus 105 ~~~--i~--~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 105 EKE--IF--DGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp CSS--CC--CEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred HHh--cc--CceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 000 00 01122244667899999999872 12 1 134789999999999998877
No 21
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=94.68 E-value=0.35 Score=44.70 Aligned_cols=105 Identities=11% Similarity=0.109 Sum_probs=60.1
Q ss_pred CCCCCcEEEEEecCCChH---HHHHHHHHHHcCCCCCCceEEEEEcCCCc--hhHHHHHHHHHHHhhccCCcEEEEeeCC
Q 009761 87 NSAYPMVLVQIPMYNEKE---VYQLSIGAACGLSWPSDRITIQVLDDSTD--PTIKDLVELECQRWASKGINIKYEIRDS 161 (526)
Q Consensus 87 ~~~~P~VsViIp~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~D~s~D--~t~~~l~~~~~~~~~~~~~~v~~~~~~~ 161 (526)
.+..|.|-||-|+|.... .+.+.-..+..- |+ +.-+|++|+.+ +.+..+.+. .+....++.-+.
T Consensus 17 ~~~~p~IivVTPTy~R~~Q~a~LtRLa~TL~~V--p~--L~WIVVEd~~~~t~~va~lL~r-------sGl~y~HL~~~~ 85 (281)
T 3cu0_A 17 RGSHMTIYVVTPTYARLVQKAELVRLSQTLSLV--PR--LHWLLVEDAEGPTPLVSGLLAA-------SGLLFTHLVVLT 85 (281)
T ss_dssp ----CEEEEEEEECCSTTHHHHHHHHHHHHTTS--SS--EEEEEEESSSSCCHHHHHHHHH-------HCSEEEEEECCC
T ss_pred CCCCCeEEEEeCCCCCcchhHHHHHHHHHHhcC--Cc--eEEEEEcCCCCCCHHHHHHHHH-------cCCceEEeccCC
Confidence 456799999999999983 444444444322 43 44445555433 333334332 155555554333
Q ss_pred CCCCC-------------ccHHHHHhhhhc--------cc------CCcEEEEecCCCCCChHHHHHH
Q 009761 162 RNGYK-------------AGALKEGMKHSY--------VK------QCDYVAIFDADFEPEPDFLWRT 202 (526)
Q Consensus 162 ~~g~K-------------~~aln~gl~~a~--------~~------~~d~v~~lDaD~~~~pd~L~~l 202 (526)
+...| ...+|.|++... .. ..-+|.|.|+|...+-+.++++
T Consensus 86 p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 86 PKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp C-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred CccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 22221 356899998774 11 2357899999999999888874
No 22
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=93.96 E-value=0.09 Score=49.00 Aligned_cols=182 Identities=12% Similarity=0.086 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccCCc
Q 009761 104 EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQCD 183 (526)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d 183 (526)
+.+..+++.+.+... +++ +++.| ++..+ +.++++ +.++.+. .++..+|.++ +..+++.....+.|
T Consensus 35 Pli~~~l~~l~~~~i--~~V-vVvt~---~~~i~----~~~~~~---g~~v~~~-~~~~~~Gt~~-i~~a~~~l~~~~~d 99 (256)
T 3tqd_A 35 PMIQHVYESAIKSGA--EEV-VIATD---DKRIR----QVAEDF---GAVVCMT-SSDHQSGTER-IAEAAVALGFEDDE 99 (256)
T ss_dssp EHHHHHHHHHHHTTC--SEE-EEEES---CHHHH----HHHHHT---TCEEEEC-CTTCCSHHHH-HHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHHhCCC--CEE-EEECC---HHHHH----HHHHHc---CCeEEEe-CCCCCCcHHH-HHHHHHHhCcCCCC
Confidence 478889998887542 333 33444 22222 223332 4454433 3333344443 55666654112579
Q ss_pred EEEEecCCC-CCChHHHHHHHhhhhcCCCEEEEeeEEEEecC----CCcHHHH-HHHHhhhhhhhhh-hh-ccccC----
Q 009761 184 YVAIFDADF-EPEPDFLWRTIPFLVHNPDIALVQARWKFVNA----DECLMTR-MQEMSLDYHFTVE-QE-VGSST---- 251 (526)
Q Consensus 184 ~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~-~~-~~~~~---- 251 (526)
.++++++|. ..+++.+.+++..+.++++.+++.......+. +.+...- .........|... .. .+...
T Consensus 100 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~pip~~r~~~~~~~ 179 (256)
T 3tqd_A 100 IIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWGRDTFSDKE 179 (256)
T ss_dssp EEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCTTTTTCGG
T ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecCCCCCCCccccccc
Confidence 999999998 66899999999988655543332222111110 0000000 0000000000000 00 00000
Q ss_pred ----CCcccccccceeeeHHHHHHcCCCCCCCccchHH--HHHHHHhCCCeEEEec
Q 009761 252 ----YAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMD--LAVRASLKGWKFVYVG 301 (526)
Q Consensus 252 ----~~~~~~~G~~~~~Rr~~l~~~gg~~~~~~~ED~~--l~~rl~~~G~~~~~~~ 301 (526)
......+.+-.+||+++++....+.... .|..| -.+|+..+|+++....
T Consensus 180 ~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~-lE~~e~leqlr~le~G~~i~~~~ 234 (256)
T 3tqd_A 180 NLQLNGSHYRHVGIYAYRVGFLEEYLSWDACP-AEKMEALEQLRILWHGGRIHMVV 234 (256)
T ss_dssp GCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCH-HHHHHTCTTHHHHHTTCCCEEEE
T ss_pred ccccCCcceEEEEEEEcCHHHHHHHHhCCCCc-ccchhhhHHHHHHHCCCeEEEEE
Confidence 0011234558899999999986665532 23332 1357789999988765
No 23
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=93.93 E-value=0.55 Score=42.71 Aligned_cols=103 Identities=12% Similarity=0.134 Sum_probs=61.7
Q ss_pred CCcEEEEEecCCChH---HHHHHHHHHHcCCCCCCceEEEEEcCCCchh--HHHHHHHHHHHhhccCCcEEEEeeCCCCC
Q 009761 90 YPMVLVQIPMYNEKE---VYQLSIGAACGLSWPSDRITIQVLDDSTDPT--IKDLVELECQRWASKGINIKYEIRDSRNG 164 (526)
Q Consensus 90 ~P~VsViIp~yne~~---~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t--~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 164 (526)
.|.|-||-|+|.... .+.+.-..+.. -|+ +.-+|++|+.+.+ +..+.+ + .|....++.-+.+..
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~--Vp~--l~WIVVEd~~~~~~~v~~lL~----~---sgl~y~HL~~~~~~~ 70 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFRQ--VAQ--LHWILVEDAAARSELVSRFLA----R---AGLPSTHLHVPTPRR 70 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHTT--STT--EEEEEEESSSSCCHHHHHHHH----H---SCSCEEEEECCCCCC
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHhc--CCc--eEEEEEcCCCCCCHHHHHHHH----H---cCCceEEEecCCccc
Confidence 588999999999983 44454444432 244 4444555544332 332333 2 266665554332221
Q ss_pred CC-------ccHHHHHhhhhccc------CCcEEEEecCCCCCChHHHHHHH
Q 009761 165 YK-------AGALKEGMKHSYVK------QCDYVAIFDADFEPEPDFLWRTI 203 (526)
Q Consensus 165 ~K-------~~aln~gl~~a~~~------~~d~v~~lDaD~~~~pd~L~~lv 203 (526)
.| ...+|.|++..... ..-+|.|.|+|...+-+.++++-
T Consensus 71 ~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR 122 (246)
T 2d0j_A 71 YKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMR 122 (246)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHT
T ss_pred cCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHh
Confidence 11 36789999765321 24688999999999998887753
No 24
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=93.86 E-value=0.31 Score=44.50 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=61.1
Q ss_pred CCcEEEEEecCCCh---HHHHHHHHHHHcCCCCCCceEEEEEcCCCc--hhHHHHHHHHHHHhhccCCcEEEEeeCCCCC
Q 009761 90 YPMVLVQIPMYNEK---EVYQLSIGAACGLSWPSDRITIQVLDDSTD--PTIKDLVELECQRWASKGINIKYEIRDSRNG 164 (526)
Q Consensus 90 ~P~VsViIp~yne~---~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D--~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 164 (526)
+|.|-||-|+|... ..+.+.-..+. + -|+ +.-+|++|+.+ +.+..+.+. .|....++.-+.+..
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~-~-Vp~--L~WIVVEd~~~~t~~va~lL~~-------sgl~y~HL~~~~p~~ 70 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTLL-H-VPN--LHWLVVEDAPRRTPLTARLLRD-------TGLNYTHLHVETPRN 70 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHT-T-SSS--EEEEEEESSSSCCHHHHHHHHH-------HCCEEEEEECCCCHH
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhhc-c-CCc--eEEEEEeCCCCCCHHHHHHHHH-------cCCceEEeecCCCcc
Confidence 58899999999998 34555555553 2 254 44445555433 333324332 155555553332100
Q ss_pred ----------C---CccHHHHHhhhhcc------cCCcEEEEecCCCCCChHHHHHHH
Q 009761 165 ----------Y---KAGALKEGMKHSYV------KQCDYVAIFDADFEPEPDFLWRTI 203 (526)
Q Consensus 165 ----------~---K~~aln~gl~~a~~------~~~d~v~~lDaD~~~~pd~L~~lv 203 (526)
. -...+|.|++.... ...-+|.|.|+|...+-+.++++-
T Consensus 71 ~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 71 YKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp HHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred ccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence 0 13478999987632 134688999999999998887753
No 25
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=92.18 E-value=0.41 Score=44.94 Aligned_cols=116 Identities=12% Similarity=0.101 Sum_probs=69.9
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccH
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGA 169 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~a 169 (526)
....|++|-+|+..+.+.+.++.+.+..+- ..+++|=.+...+..+.... .....+..+++.... .+ .-.+
T Consensus 27 ~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v--~~IvVvWn~~~~~pp~~~~~----~~~~~~vpv~v~~~~-~n--sLnn 97 (293)
T 1omz_A 27 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSL--HKVIVVWNNVGEKGPEELWN----SLGPHPIPVIFKPQT-AN--KMRN 97 (293)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHHHTTSTTE--EEEEEEECCTTCCCTHHHHH----HTCCCSSCEEEEECS-SC--CGGG
T ss_pred CCceEEEEEeecccHHHHHHHHHHhcCCCC--CeEEEEeCCCCCCCChhhcc----ccCCCCccEEEEeCC-CC--chhh
Confidence 457999999999999999999887655432 23332334432222221111 111223566665322 22 2222
Q ss_pred HHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeE
Q 009761 170 LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQAR 218 (526)
Q Consensus 170 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~ 218 (526)
+-.-.... +.|-|+.+|+|..++.+.|+.......++|+- +|+..
T Consensus 98 RF~p~~~i---~T~AVLslDDDv~l~~~el~faF~vWr~~PdR-lVGf~ 142 (293)
T 1omz_A 98 RLQVFPEV---ETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQ-IIGFV 142 (293)
T ss_dssp GGSCCTTC---CSSEEEEECTTEEECHHHHHHHHHHHTTSTTS-EEESC
T ss_pred ccCCCccC---CcCEEEEEcCCCCCCHHHHHHHHHHHHHCccc-eecCc
Confidence 22223444 89999999999999999999888877777862 44433
No 26
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=89.24 E-value=1.7 Score=40.14 Aligned_cols=96 Identities=15% Similarity=0.144 Sum_probs=57.4
Q ss_pred CChHHHHHHH-HHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcc
Q 009761 101 NEKEVYQLSI-GAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYV 179 (526)
Q Consensus 101 ne~~~l~~~L-~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~ 179 (526)
+..+.+..++ +++.+.. -+++ +++.|+ +... +.++++ +.++.+. ++...+|. +++..+++....
T Consensus 24 ~GkPli~~~i~~~~~~~~--~~~v-vVvt~~---~~i~----~~~~~~---g~~v~~~-~~~~~~Gt-~~i~~a~~~~~~ 88 (253)
T 4fcu_A 24 HDRPMILRVVDQAKKVEG--FDDL-CVATDD---ERIA----EICRAE---GVDVVLT-SADHPSGT-DRLSEVARIKGW 88 (253)
T ss_dssp TTEEHHHHHHHHHHTCTT--CCEE-EEEESC---HHHH----HHHHTT---TCCEEEC-CTTCCCHH-HHHHHHHHHHTC
T ss_pred CCeEhHHHHHHHHHHhcC--CCEE-EEECCH---HHHH----HHHHHc---CCeEEEe-CCCCCChH-HHHHHHHHhcCc
Confidence 3446889999 8887643 2333 435542 2222 223332 4454333 33333333 356667766521
Q ss_pred cCCcEEEEecCCC-CCChHHHHHHHhhhhcCCC
Q 009761 180 KQCDYVAIFDADF-EPEPDFLWRTIPFLVHNPD 211 (526)
Q Consensus 180 ~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~ 211 (526)
.+.|+++++++|. .++++.+.+++..+.++++
T Consensus 89 ~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~ 121 (253)
T 4fcu_A 89 DADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPN 121 (253)
T ss_dssp CTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTT
T ss_pred CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCC
Confidence 1469999999998 6789999999998866654
No 27
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=86.89 E-value=3.9 Score=37.94 Aligned_cols=89 Identities=12% Similarity=0.057 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccCCc
Q 009761 104 EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQCD 183 (526)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d 183 (526)
+.+..+++.+.+... +++ +++.| ++..+ +.++++ +.++.+. .+...+|.++ +..+++.....+.|
T Consensus 44 Pmi~~~l~~l~~~~i--~~I-vV~t~---~~~i~----~~~~~~---g~~v~~~-~~~~~~Gt~~-i~~~~~~l~~~~~d 108 (264)
T 3k8d_A 44 PMIVHVLERARESGA--ERI-IVATD---HEDVA----RAVEAA---GGEVCMT-RADHQSGTER-LAEVVEKCAFSDDT 108 (264)
T ss_dssp EHHHHHHHHHHHTTC--SEE-EEEES---CHHHH----HHHHHT---TCEEEEC-CTTCCSHHHH-HHHHHHHHTCCTTC
T ss_pred EHHHHHHHHHHhCCC--CEE-EEECC---HHHHH----HHHHHc---CCEEEEe-cCCCCCCHHH-HHHHHHHhccCCCC
Confidence 378899998887642 333 33443 23222 223332 4444332 3333444444 55555543112579
Q ss_pred EEEEecCCC-CCChHHHHHHHhhhh
Q 009761 184 YVAIFDADF-EPEPDFLWRTIPFLV 207 (526)
Q Consensus 184 ~v~~lDaD~-~~~pd~L~~lv~~~~ 207 (526)
+++++++|. .++++.+++++..+.
T Consensus 109 ~vlv~~gD~Pli~~~~i~~li~~~~ 133 (264)
T 3k8d_A 109 VIVNVQGDEPMIPATIIRQVADNLA 133 (264)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHHHH
T ss_pred EEEEEcCCcccCCHHHHHHHHHHHh
Confidence 999999997 568999999999884
No 28
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=86.57 E-value=2.8 Score=36.48 Aligned_cols=91 Identities=13% Similarity=0.140 Sum_probs=53.7
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+....++.+++.+.+... +++ ++|.+.. ++. +. +... ..++.++..+....|..+++..|++... .
T Consensus 29 ~g~pll~~~l~~l~~~~~--~~i-~vv~~~~-~~~---~~-~~~~-----~~~~~~~~~~~~~~g~~~~i~~al~~~~-~ 94 (197)
T 2wee_A 29 RDTTVLGATLDVARQAGF--DQL-ILTLGGA-ASA---VR-AAMA-----LDGTDVVVVEDVERGCAASLRVALARVH-P 94 (197)
T ss_dssp TTEEHHHHHHHHHHHTTC--SEE-EEEECTT-HHH---HH-HHSC-----CTTSEEEECC----CCHHHHHHHHTTSC-T
T ss_pred CCccHHHHHHHHHHhcCC--CcE-EEEeCCC-HHH---HH-HHhc-----cCCCEEEECCCcccCHHHHHHHHHHHhc-c
Confidence 345789999999887642 233 3344332 222 21 1111 1234444333233347788888887751 1
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhh
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPF 205 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~ 205 (526)
+.|.++++++|. .++++.+++++..
T Consensus 95 ~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 95 RATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp TEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 368999999998 5689999999886
No 29
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=86.55 E-value=3.7 Score=36.97 Aligned_cols=89 Identities=9% Similarity=0.006 Sum_probs=54.4
Q ss_pred ChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEee-CCCCCCCccHHHHHhhhhccc
Q 009761 102 EKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIR-DSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~-~~~~g~K~~aln~gl~~a~~~ 180 (526)
..+.++.+++++.+. . ++++| +.++ +... +..++ . +.++.. +...+|.+++. .+++..
T Consensus 26 g~pli~~~l~~~~~~-~--~~i~v-~~~~---~~i~----~~~~~----~--~~~~~~~~~~~~g~~~~~-~~~~~~--- 84 (234)
T 2y6p_A 26 GKPLIRWVVEGLVKT-G--ERVIL-ATDS---ERVK----EVVED----L--CEVFLTPSDLPSGSDRVL-YVVRDL--- 84 (234)
T ss_dssp TEEHHHHHHHHHHTT-T--SCEEE-EESC---HHHH----HHHTT----T--SEEEECCTTCCSHHHHHH-HHHTTC---
T ss_pred CEEHHHHHHHHHHHh-C--CEEEE-ECCh---HHHH----HHHHh----c--eEEEECCcccccchHHHH-HHHHhC---
Confidence 347899999998876 2 33433 4443 2221 12111 1 233322 23344556655 456665
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhhhcCCC
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFLVHNPD 211 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~ 211 (526)
+.|+++++++|. ..+++.+.+++..+.++++
T Consensus 85 ~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 85 DVDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 679999999999 7898999999987754444
No 30
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=85.66 E-value=6.3 Score=34.19 Aligned_cols=91 Identities=10% Similarity=0.082 Sum_probs=55.6
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+....++.+++.+.+... +++ ++|.+. .++. +. +...+ .++.++..+....|..+++..|++... .
T Consensus 29 ~g~pli~~~l~~l~~~~~--~~i-~vv~~~-~~~~---~~-~~~~~-----~~~~~~~~~~~~~g~~~~i~~al~~~~-~ 94 (199)
T 2waw_A 29 GDTTLLGATLAMARRCPF--DQL-IVTLGG-AADE---VL-EKVEL-----DGLDIVLVDDAGLGCSSSLKSALTWVD-P 94 (199)
T ss_dssp TTEEHHHHHHHHHHTSSC--SEE-EEEECT-THHH---HH-HHSCC-----TTSEEEECCCCCTTCCCHHHHHHHTSC-T
T ss_pred CccCHHHHHHHHHHhCCC--CcE-EEEeCC-CHHH---HH-HHhcc-----CCCEEEECCCcccCHHHHHHHHHHhhh-c
Confidence 345789999999987641 233 334433 2222 21 11111 233444333333357888999988751 1
Q ss_pred CCcEEEEecCCCC-CChHHHHHHHhh
Q 009761 181 QCDYVAIFDADFE-PEPDFLWRTIPF 205 (526)
Q Consensus 181 ~~d~v~~lDaD~~-~~pd~L~~lv~~ 205 (526)
+.|.++++++|.. ++++.+++++..
T Consensus 95 ~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 95 TAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp TCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 4689999999986 489999999887
No 31
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=85.48 E-value=4.7 Score=36.79 Aligned_cols=100 Identities=12% Similarity=0.012 Sum_probs=59.0
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcc-
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYV- 179 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~- 179 (526)
+..+.+..+++++.+.... +++ ++|.+.. +. + ..++..+++.. ...+.++. +.. +..+++..|++....
T Consensus 30 ~Gkpll~~~l~~~~~~~~~-~~i-vvv~~~~-~~--~-~~~~~~~~~~~-~~~~~~~~--~~~-~~~~sv~~al~~l~~~ 99 (246)
T 3f1c_A 30 NGKPIIVHTVEKFILNTRF-DKI-LISSPKE-WM--N-HAEDNIKKYIS-DDRIVVIE--GGE-DRNETIMNGIRFVEKT 99 (246)
T ss_dssp TTEEHHHHHHHHHHTCTTC-SEE-EEEECGG-GH--H-HHHHHHHHHCC-CTTEEEEE--CCS-SHHHHHHHHHHHHHHH
T ss_pred CCeeHHHHHHHHHHcCCCC-CEE-EEEeCHH-HH--H-HHHHHHHHhCC-CCCEEEEC--CCC-chHHHHHHHHHHHhhh
Confidence 3447899999999876432 233 3344432 21 1 12223333311 22454442 222 256677778876521
Q ss_pred ---cCCcEEEEecCCC-CCChHHHHHHHhhhhcCC
Q 009761 180 ---KQCDYVAIFDADF-EPEPDFLWRTIPFLVHNP 210 (526)
Q Consensus 180 ---~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~ 210 (526)
.+.|+|+++|+|. .++++.+.+++..+.+++
T Consensus 100 ~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~ 134 (246)
T 3f1c_A 100 YGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETG 134 (246)
T ss_dssp TCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTS
T ss_pred hcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcC
Confidence 1369999999996 679999999998885543
No 32
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=84.62 E-value=0.96 Score=42.56 Aligned_cols=108 Identities=10% Similarity=0.014 Sum_probs=63.6
Q ss_pred cCCcEEEEecCCCCCChHHHHHHHhhhhcCCCEEEEeeEEEEecCCCcHHHHHHHHhhhhhhhhhhhccccCCCcccccc
Q 009761 180 KQCDYVAIFDADFEPEPDFLWRTIPFLVHNPDIALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNG 259 (526)
Q Consensus 180 ~~~d~v~~lDaD~~~~pd~L~~lv~~~~~~~~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 259 (526)
++.||+++.|+|+.+..+-|.+++..+ |++-...-|......... . ..+..... .......++..|
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~--d~~~~~YiG~~~~~~~~~----~---~~~~~~~~-----~~~~~~~y~~GG 157 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTF--PQDRDVYVGKPSLNRPIH----A---SELQSKQR-----TKLVRFWFATGG 157 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTS--CTTSCCEEECEEC-------------------------------CCEECGG
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhC--CCCCCEEEEEeccCcccc----c---cccCcccc-----ccccccCcccCC
Confidence 389999999999999999999998876 443232223322111000 0 00000000 000112344568
Q ss_pred cceeeeHHHHHHcCCCC----------CCCccchHHHHHHHH-hCCCeEEEec
Q 009761 260 TAGVWRISALNEAGGWK----------DRTTVEDMDLAVRAS-LKGWKFVYVG 301 (526)
Q Consensus 260 ~~~~~Rr~~l~~~gg~~----------~~~~~ED~~l~~rl~-~~G~~~~~~~ 301 (526)
++.+++|++++++..+. .....||..++.-+. +.|-+....+
T Consensus 158 aG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~ 210 (280)
T 2j0a_A 158 AGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSP 210 (280)
T ss_dssp GCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECT
T ss_pred CEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecc
Confidence 89999999998863211 112458999999998 8898877654
No 33
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=84.60 E-value=4.3 Score=41.55 Aligned_cols=107 Identities=20% Similarity=0.160 Sum_probs=65.3
Q ss_pred CcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHH
Q 009761 91 PMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGAL 170 (526)
Q Consensus 91 P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~al 170 (526)
|++ ++|+.|.+ .|+..|+++.+... +++.| |+. ...+.+++...+..+++ +.++.+...+++.| -++|+
T Consensus 31 pK~--l~pv~gkp-~i~~~l~~~~~~g~--~~i~v-v~~-~~~~~i~~~~~~~~~~~---~~~i~~~~q~~~lG-Ta~Av 99 (501)
T 3st8_A 31 PKV--LHTLAGRS-MLSHVLHAIAKLAP--QRLIV-VLG-HDHQRIAPLVGELADTL---GRTIDVALQDRPLG-TGHAV 99 (501)
T ss_dssp CGG--GCEETTEE-HHHHHHHHHHHHCC--SEEEE-EEC-TTHHHHHHHHHHHHHHH---TSCCEEEECSSCCC-HHHHH
T ss_pred CHH--HeEECChh-HHHHHHHHHHhCCC--CEEEE-EeC-CCHHHHHHHHHHHHHhc---CCcEEEEEcCCCCC-cHHHH
Confidence 554 68888875 78888888876643 23333 443 22333333333322333 67788885555555 89999
Q ss_pred HHHhhhhcccCCcEEEEecCC-CCCChHHHHHHHhhhhc
Q 009761 171 KEGMKHSYVKQCDYVAIFDAD-FEPEPDFLWRTIPFLVH 208 (526)
Q Consensus 171 n~gl~~a~~~~~d~v~~lDaD-~~~~pd~L~~lv~~~~~ 208 (526)
..+.+.......+.++++..| ....++.+.+++...++
T Consensus 100 ~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~ 138 (501)
T 3st8_A 100 LCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRA 138 (501)
T ss_dssp HHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhh
Confidence 998887622223455555555 56788999999876543
No 34
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=82.71 E-value=8.9 Score=34.64 Aligned_cols=166 Identities=10% Similarity=0.038 Sum_probs=84.7
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcc-
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYV- 179 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~- 179 (526)
+..+.+..+++++.+.... ++ +++|.+....+. + +..... .+.++. .... ...++..|++....
T Consensus 33 ~Gkpll~~~l~~~~~~~~~-~~-ivVv~~~~~~~~---~-~~~~~~------~v~~v~--gg~~-r~~sv~~gl~~~~~~ 97 (231)
T 3q80_A 33 DGQTLIERAVDGLLDSGVV-DT-VVVAVPADRTDE---A-RQILGH------RAMIVA--GGSN-RTDTVNLALTVLSGT 97 (231)
T ss_dssp TTEEHHHHHHHHHHHTSCC-CE-EEEEECGGGHHH---H-HHHHGG------GCEEEE--CCSS-HHHHHHHHHGGGC--
T ss_pred CCeEHHHHHHHHHHhCCCC-Ce-EEEECChHHHHH---H-HHHhcC------CeEEEc--CCCc-hHHHHHHHHHHhhhc
Confidence 4557899999998765322 23 333444322111 2 111111 344441 1111 35677788887621
Q ss_pred cCCcEEEEecCC-CCCChHHHHHHHhhhhcCCCEEEEeeEEE----EecCCCcHHHHHHHHhhhhhhhhhhhccccCCCc
Q 009761 180 KQCDYVAIFDAD-FEPEPDFLWRTIPFLVHNPDIALVQARWK----FVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAF 254 (526)
Q Consensus 180 ~~~d~v~~lDaD-~~~~pd~L~~lv~~~~~~~~v~~V~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (526)
.+.|+++++|+| -.++++.+++++..+.++.+.++...+.. ..+.+.. ..+ ... ++...
T Consensus 98 ~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~~~~~~i~~~p~~dt~~~~~~~g~-v~~----------~~~---r~~l~-- 161 (231)
T 3q80_A 98 AEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGV-VLG----------TPE---RAGLR-- 161 (231)
T ss_dssp -CCSEEEECCTTCTTCCHHHHHHHHHHHHTTCSEEEEEECCSSCEEEECTTSB-EEE----------CCC---GGGEE--
T ss_pred CCCCEEEEEcCCcCCCCHHHHHHHHHHHhhcCCeEEEEEeccCCEEEEcCCCc-EEE----------ecc---hhheE--
Confidence 015899999999 45699999999998854234333322211 1111110 000 000 11111
Q ss_pred ccccccceeeeHHHHHHc----CCC-CCCCccchHHHHHHHHhCCCeEEEecc
Q 009761 255 FGFNGTAGVWRISALNEA----GGW-KDRTTVEDMDLAVRASLKGWKFVYVGD 302 (526)
Q Consensus 255 ~~~~G~~~~~Rr~~l~~~----gg~-~~~~~~ED~~l~~rl~~~G~~~~~~~~ 302 (526)
..-+-.+||.+.+.+. ..- ++..++||..+..+ .|.++..++.
T Consensus 162 --~~qTPq~F~~~~L~~a~~~~~~~n~~~~~TD~~~~~~~---~g~~v~~v~g 209 (231)
T 3q80_A 162 --AVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEH---IGGQVQVVDG 209 (231)
T ss_dssp --EECSCEEEEHHHHHHHHHHHTC-----CCSSSHHHHHH---TTCCCEEEEC
T ss_pred --EEcCCcEEEHHHHHHHHHHHHhhcCCCCCCcHHHHHHH---cCCcEEEEEC
Confidence 1134578898776553 110 12346888887654 6888877764
No 35
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=82.36 E-value=17 Score=32.48 Aligned_cols=92 Identities=15% Similarity=0.116 Sum_probs=53.1
Q ss_pred ChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC----CCCCCccHHHHHhhhh
Q 009761 102 EKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS----RNGYKAGALKEGMKHS 177 (526)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~----~~g~K~~aln~gl~~a 177 (526)
..+.++.+++.+.+...- +++ +++.| ++..+ +.++++ +.. ++.++. ...+-.+++..|++..
T Consensus 27 Gkpli~~~i~~~~~~~~~-~~i-vv~~~---~~~i~----~~~~~~---g~~--~~~~~~~~~~~~~~~~~~v~~al~~~ 92 (229)
T 1qwj_A 27 GVPLIGWVLRAALDAGVF-QSV-WVSTD---HDEIE----NVAKQF---GAQ--VHRRSSETSKDSSTSLDAIVEFLNYH 92 (229)
T ss_dssp TEEHHHHHHHHHHHHTCC-SEE-EEEES---CHHHH----HHHHHT---TCE--EEECCGGGSSTTCCHHHHHHHHHTTC
T ss_pred CEEHHHHHHHHHHhCCCc-CEE-EEECC---hHHHH----HHHHHc---CCE--EEeChhhhcCCCCcHHHHHHHHHHhc
Confidence 346788888888765421 233 33443 22222 222232 333 333331 1111235666777765
Q ss_pred cccCCcEEEEecCCCC-CChHHHHHHHhhhhcC
Q 009761 178 YVKQCDYVAIFDADFE-PEPDFLWRTIPFLVHN 209 (526)
Q Consensus 178 ~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 209 (526)
.+.|.++++++|.- ++++.+.+++..+.++
T Consensus 93 --~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~ 123 (229)
T 1qwj_A 93 --NEVDIVGNIQATSPCLHPTDLQKVAEMIREE 123 (229)
T ss_dssp --TTCSEEEEECTTCTTCCHHHHHHHHHHHHSS
T ss_pred --CCCCEEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 25799999999975 5899999999877443
No 36
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=82.17 E-value=11 Score=34.46 Aligned_cols=97 Identities=16% Similarity=0.104 Sum_probs=56.1
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhh
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKH 176 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~ 176 (526)
+|..+ .+.+..+++++.+... +++ +++.| ++... +.+.++ +.++.+. .++...|.++ ...+++.
T Consensus 22 ~~i~G-kPli~~~l~~l~~~~~--~~i-vVv~~---~~~i~----~~~~~~---g~~v~~~-~~~~~~Gt~~-~~~~~~~ 85 (252)
T 3oam_A 22 ADIGG-KPMIQWVYEQAMQAGA--DRV-IIATD---DERVE----QAVQAF---GGVVCMT-SPNHQSGTER-LAEVVAK 85 (252)
T ss_dssp CEETT-EEHHHHHHHHHHHTTC--SEE-EEEES---CHHHH----HHHHHT---TCEEEEC-CTTCCSHHHH-HHHHHHH
T ss_pred eeECC-EEHHHHHHHHHHhCCC--CeE-EEECC---HHHHH----HHHHHc---CCEEEEc-CCCCCCcHHH-HHHHHHh
Confidence 34433 4588899998887652 333 33554 22222 223332 4555443 3333444555 3444444
Q ss_pred hcccCCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 177 SYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 177 a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
....+.|.++++++|. .++++.+.+++..+.++
T Consensus 86 l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~ 119 (252)
T 3oam_A 86 MAIPADHIVVNVQGDEPLIPPAIIRQVADNLAAC 119 (252)
T ss_dssp TTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHS
T ss_pred cCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhc
Confidence 3112578999999998 67899999999887543
No 37
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=81.09 E-value=20 Score=32.23 Aligned_cols=91 Identities=15% Similarity=0.089 Sum_probs=54.2
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeC-CCCCCCccHHHHHhhhhcc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRD-SRNGYKAGALKEGMKHSYV 179 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~-~~~g~K~~aln~gl~~a~~ 179 (526)
+..+.++.+++.+.+.... ++ +++|.++ +... +.+.++ + +.++..+ +..+|-+++. .+++..
T Consensus 25 ~g~pli~~~i~~~~~~~~~-~~-ivvv~~~---~~i~----~~~~~~---~--~~~~~~~~~~~~g~~~~~-~~~~~~-- 87 (245)
T 1h7e_A 25 VGKPMIQHVYERALQVAGV-AE-VWVATDD---PRVE----QAVQAF---G--GKAIMTRNDHESGTDRLV-EVMHKV-- 87 (245)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CE-EEEEESC---HHHH----HHHHHT---T--CEEEECCSCCSSHHHHHH-HHHHHS--
T ss_pred CCchHHHHHHHHHHhCCCC-Ce-EEEECCc---HHHH----HHHHHc---C--CeEEeCCCccCCcHHHHH-HHHHhC--
Confidence 3457899999999876432 23 3335543 2222 222222 3 3444332 2333344433 455555
Q ss_pred cCCcEEEEecCCCC-CChHHHHHHHhhhhcC
Q 009761 180 KQCDYVAIFDADFE-PEPDFLWRTIPFLVHN 209 (526)
Q Consensus 180 ~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 209 (526)
+.|.++++++|.- .+++.+.+++..+.++
T Consensus 88 -~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 88 -EADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp -CCSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred -CCCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 6799999999985 5899999999877544
No 38
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=80.32 E-value=6.6 Score=39.45 Aligned_cols=101 Identities=17% Similarity=0.164 Sum_probs=60.1
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhh
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKH 176 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~ 176 (526)
+|.- ..+.++.+++++.+... +++.| +.... ++..+ +...+ .++.++..+. ..|-++++..+++.
T Consensus 31 ~~i~-g~pli~~~l~~l~~~~~--~~i~v-v~~~~-~~~i~----~~~~~-----~~~~~v~~~~-~~g~~~~i~~~~~~ 95 (459)
T 4fce_A 31 HPLA-GKPMVQHVIDAAMKLGA--QHVHL-VYGHG-GELLK----KTLAD-----PSLNWVLQAE-QLGTGHAMQQAAPH 95 (459)
T ss_dssp SEET-TEEHHHHHHHHHHHHTC--SCEEE-EESSC-HHHHH----HHC----------CEEECSS-CCCHHHHHHHHGGG
T ss_pred CeeC-CeeHHHHHHHHHHhCCC--CcEEE-EeCCC-HHHHH----HHhcc-----CCcEEEeCCC-CCCcHHHHHHHHHh
Confidence 3443 34788999998887642 33333 44322 22222 22111 2344553333 33467888899888
Q ss_pred hcccCCcEEEEecCCC-CCChHHHHHHHhhhhcCCCEEEE
Q 009761 177 SYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHNPDIALV 215 (526)
Q Consensus 177 a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~~~v~~V 215 (526)
.. +.|.++++++|. .++++.++++++.+. +.+..+.
T Consensus 96 ~~--~~~~~lv~~~D~P~i~~~~i~~l~~~~~-~~~~~~~ 132 (459)
T 4fce_A 96 FA--DDEDILMLYGDVPLISVDTLQRLLAAKP-EGGIGLL 132 (459)
T ss_dssp SC--TTSEEEEEETTCTTCCHHHHHHHHHHCC-TTSEEEE
T ss_pred cC--CCCcEEEEeCCcccCCHHHHHHHHHHHh-hCCEEEE
Confidence 71 359999999998 678999999998873 3444333
No 39
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=80.31 E-value=1.9 Score=40.36 Aligned_cols=54 Identities=13% Similarity=-0.042 Sum_probs=40.4
Q ss_pred CcEEEEeeCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChH----HHHHHHhhhhcC
Q 009761 152 INIKYEIRDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPD----FLWRTIPFLVHN 209 (526)
Q Consensus 152 ~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd----~L~~lv~~~~~~ 209 (526)
.++.+...... .|-++++..+.+.. +.|.++++.+|...+++ .+.+++..+.+.
T Consensus 95 ~~i~~~~~~~~-~Gt~~al~~a~~~l---~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~ 152 (281)
T 3juk_A 95 CCFSYVRQKQM-KGLGHAILTGEALI---GNEPFAVILADDLCISHDHPSVLKQMTSLYQKY 152 (281)
T ss_dssp CEEEEEECSSC-CCHHHHHHHTHHHH---CSSCEEEECTTEEEECTTSCCHHHHHHHHHHHH
T ss_pred ccEEEEecCCC-CCcHHHHHHHHHHc---CCCCEEEEeCCeeccCccchHHHHHHHHHHHHc
Confidence 45656643443 34788999998887 66889999999988888 899999876443
No 40
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=80.25 E-value=2.1 Score=37.69 Aligned_cols=86 Identities=14% Similarity=0.042 Sum_probs=52.8
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+....++.+++.+.+. +++| |..+. ++. +.+ .. . .++ ++..+....|-.+++..|++...
T Consensus 26 ~g~pll~~~l~~l~~~-----~ivv-v~~~~-~~~---~~~-~~----~--~~~-~v~~~~~~~G~~~si~~al~~~~-- 85 (197)
T 3d5n_A 26 DNTPIIMRTIRIYGDL-----EKII-IVGKY-VNE---MLP-LL----M--DQI-VIYNPFWNEGISTSLKLGLRFFK-- 85 (197)
T ss_dssp SSSBHHHHHHHHTTTS-----BCCE-EECTT-HHH---HGG-GC----T--TSC-EEECTTGGGCHHHHHHHHHHHTT--
T ss_pred CceEHHHHHHHHHHhC-----CEEE-EECCC-HHH---HHH-Hh----c--CCE-EEECCCCCCCHHHHHHHHHHhhc--
Confidence 4457889999988655 3433 44332 211 211 11 1 134 44333222346778888888761
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhh
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFL 206 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~ 206 (526)
+.|.++++++|. .++++.+++++..+
T Consensus 86 ~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 86 DYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp TSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred cCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 348999999998 56999999999876
No 41
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=77.62 E-value=8.1 Score=33.91 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=32.8
Q ss_pred CCccHHHHHhhhhcccCCcEEEEecCCC-CCChHHHHHHHhh
Q 009761 165 YKAGALKEGMKHSYVKQCDYVAIFDADF-EPEPDFLWRTIPF 205 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~ 205 (526)
|..+++..|++.. +.|+++++++|. .++++.+++++..
T Consensus 78 G~~~si~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 78 GPLAGMLSVMQQE---AGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp SHHHHHHHHHHHC---CSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CHHHHHHHHHHhC---CCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 5778888999887 789999999998 6789999998876
No 42
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=77.02 E-value=12 Score=33.13 Aligned_cols=85 Identities=11% Similarity=0.078 Sum_probs=52.3
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+....++.+++.+... ++ ++|..+ ++..+ ...+. .++.++.......|...++..|++.+
T Consensus 24 ~G~pli~~~~~~l~~~-----~v-vvv~~~--~~~~~----~~~~~-----~~~~~v~d~~~~~G~~~si~~gl~~~--- 83 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF-----QT-VFVCRD--EKQAE----KLSSR-----YEAEFIWDLHKGVGSIAGIHAALRHF--- 83 (208)
T ss_dssp TTEEHHHHHHHHHTTS-----EE-EEECSS--HHHHH----HHHTT-----SCSCEECCTTCCCSHHHHHHHHHHHH---
T ss_pred CCeeHHHHHHHHhcCC-----CE-EEEECC--HHHHH----HHHHh-----cCCeEEecCCCCCChHHHHHHHHHHc---
Confidence 5667899999988754 23 324432 22222 22111 23334422222224557888888876
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhhh
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFLV 207 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 207 (526)
.|++ ++++|. .++++.+++++..+.
T Consensus 84 -~~~v-v~~~D~P~i~~~~i~~l~~~~~ 109 (208)
T 3ngw_A 84 -GSCV-VAAIDMPFVKPEVLEHLYKEGE 109 (208)
T ss_dssp -SSEE-EEETTCTTCCHHHHHHHHHHHH
T ss_pred -CCCE-EEECCccCCCHHHHHHHHHHhh
Confidence 5889 999997 559999999998874
No 43
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=76.55 E-value=11 Score=33.60 Aligned_cols=92 Identities=13% Similarity=0.170 Sum_probs=53.4
Q ss_pred ChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC----CCCCCccHHHHHhhhh
Q 009761 102 EKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS----RNGYKAGALKEGMKHS 177 (526)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~----~~g~K~~aln~gl~~a 177 (526)
..+.++.+++.+.+...- ++ ++++.++ +..+ +.++++ +..+ +.++. ...|...++..|++..
T Consensus 28 gkpll~~~l~~~~~~~~~-~~-ivvv~~~---~~i~----~~~~~~---~~~~--~~~~~~~~~~~~g~~~sv~~~l~~~ 93 (228)
T 1ezi_A 28 GISLLGHTINAAISSKCF-DR-IIVSTDG---GLIA----EEAKNF---GVEV--VLRPAELASDTASSISGVIHALETI 93 (228)
T ss_dssp TEEHHHHHHHHHHHHCCC-SE-EEEEESC---HHHH----HHHHHT---TCEE--EECCC------CHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHhCCCC-CE-EEEECCC---HHHH----HHHHHc---CCEE--EeCchHHcCCCCChHHHHHHHHHHh
Confidence 446888899888765321 23 3435542 2222 222232 3333 32332 1122456677788776
Q ss_pred cccCCcEEEEecCCCC-CChHHHHHHHhhhhc
Q 009761 178 YVKQCDYVAIFDADFE-PEPDFLWRTIPFLVH 208 (526)
Q Consensus 178 ~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~ 208 (526)
..+.|.++++++|.- .+++.+.+++..+.+
T Consensus 94 -~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~ 124 (228)
T 1ezi_A 94 -GSNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (228)
T ss_dssp -TCCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred -CCCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 113689999999974 689999999987643
No 44
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=74.84 E-value=4 Score=37.82 Aligned_cols=95 Identities=12% Similarity=0.019 Sum_probs=56.7
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.++.+++++.+... +++ ++|.+....+. +.+ ........+.++.+.. .....|-++++..+.+..
T Consensus 53 ~g~pli~~~l~~l~~~g~--~~i-ivv~~~~~~~~---~~~-~~~~~~~~~~~i~~~~-~~~~~G~~~al~~a~~~~--- 121 (269)
T 4ecm_A 53 GRYPMIYHAVYKLKQCDI--TDI-MIITGKEHMGD---VVS-FLGSGQEFGVSFTYRV-QDKAGGIAQALGLCEDFV--- 121 (269)
T ss_dssp TTEEHHHHHHHHHHHTTC--CEE-EEEECTTTHHH---HHH-HHTTSGGGTCEEEEEE-CSSCCCHHHHHHTTHHHH---
T ss_pred CCEEHHHHHHHHHHHCCC--CEE-EEECChhhHHH---HHH-HHhhccccCceEEEee-CCccCcHHHHHHHHHHhc---
Confidence 345689999999987642 233 33554322222 222 1111011244565653 333445778888888877
Q ss_pred CCcEEEEecCCCCCChHHHHHHHhhhh
Q 009761 181 QCDYVAIFDADFEPEPDFLWRTIPFLV 207 (526)
Q Consensus 181 ~~d~v~~lDaD~~~~pd~L~~lv~~~~ 207 (526)
+.|.++++.+|.... ..+.+++..+.
T Consensus 122 ~~~~~lv~~~D~~~~-~~l~~l~~~~~ 147 (269)
T 4ecm_A 122 GNDRMVVILGDNIFS-DDIRPYVEEFT 147 (269)
T ss_dssp TTSEEEEEETTEEES-SCSHHHHHHHH
T ss_pred CCCcEEEEeCCccCc-cCHHHHHHHHH
Confidence 678999999998766 55677777663
No 45
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=74.69 E-value=17 Score=36.23 Aligned_cols=94 Identities=11% Similarity=0.079 Sum_probs=57.9
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhh
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKH 176 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~ 176 (526)
+|.-+ .+.++.+++++.+... +++.| +.+.. .+. +. +...+ .++.++..+. ..|.++++..+++.
T Consensus 28 ~~i~g-kpli~~~l~~l~~~~~--~~iiv-v~~~~-~~~---i~-~~~~~-----~~~~~v~~~~-~~g~~~~~~~~~~~ 92 (456)
T 2v0h_A 28 HTIAG-KPMVKHVIDTAHQLGS--ENIHL-IYGHG-GDL---MR-THLAN-----EQVNWVLQTE-QLGTAHAVQQAAPF 92 (456)
T ss_dssp SEETT-EEHHHHHHHHHHHTTC--SCEEE-EECTT-HHH---HH-HHTTT-----CCCEEEECSC-CCCHHHHHHHHGGG
T ss_pred cEECC-ccHHHHHHHHHHhCCC--CcEEE-EeCCC-HHH---HH-HHhhc-----CCcEEEeCCC-CCCcHHHHHHHHHh
Confidence 34433 4789999999987652 33333 44432 222 22 11111 1355553333 33467788888877
Q ss_pred hcccCCcEEEEecCCC-CCChHHHHHHHhhhh
Q 009761 177 SYVKQCDYVAIFDADF-EPEPDFLWRTIPFLV 207 (526)
Q Consensus 177 a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~ 207 (526)
.. +.|.++++++|. ..+++.++++++.+.
T Consensus 93 ~~--~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 122 (456)
T 2v0h_A 93 FK--DNENIVVLYGDAPLITKETLEKLIEAKP 122 (456)
T ss_dssp CC--TTSEEEEEETTCTTCCHHHHHHHHHHCC
T ss_pred cC--CCCeEEEEcCCcceeCHHHHHHHHHHHh
Confidence 61 379999999998 568899999998763
No 46
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=73.74 E-value=12 Score=35.38 Aligned_cols=97 Identities=15% Similarity=0.140 Sum_probs=58.2
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCC-cEEEEeeCCCCCCCccHHHHHh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGI-NIKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~-~v~~~~~~~~~g~K~~aln~gl 174 (526)
++|..+..+.++.+++.+.+. . ++++| |.+.... + .+++...+. .+. ++.++..+... |-++++..+.
T Consensus 30 ll~i~gg~pli~~~l~~l~~~-~--~~i~v-v~~~~~~---~-~i~~~~~~~--~~~~~~~~i~~~~~~-gt~~al~~a~ 98 (308)
T 2qh5_A 30 FLKLFDHKSLFELSFKRNASL-V--DETLI-VCNEKHY---F-LALEEIKNE--IKNKSVGFLLESLSK-NTANAIALSA 98 (308)
T ss_dssp GCTTBTTBCHHHHHHHHHHTT-C--SEEEE-EEEGGGH---H-HHHHHTTTT--CSSCEEEEEEESSCC-CHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHcc-C--CCEEE-EEChhHH---H-HHHHHHHHh--hCCCccEEEeCCCCC-ChHHHHHHHH
Confidence 356655668899999998876 2 33433 4443211 1 122221110 133 45555444443 4788888887
Q ss_pred hhhcccCCcEEEEecCCCCC-ChHHHHHHHhh
Q 009761 175 KHSYVKQCDYVAIFDADFEP-EPDFLWRTIPF 205 (526)
Q Consensus 175 ~~a~~~~~d~v~~lDaD~~~-~pd~L~~lv~~ 205 (526)
... ...++++++.+|... +++.+.+++..
T Consensus 99 ~~l--~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 99 LMS--DKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HTS--CTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HHh--CCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 765 135689999999887 78888888865
No 47
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=72.97 E-value=19 Score=31.98 Aligned_cols=100 Identities=9% Similarity=-0.006 Sum_probs=55.6
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhc-cCCcEEEEeeCCCCCCCccHHHHHhhhhcc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWAS-KGINIKYEIRDSRNGYKAGALKEGMKHSYV 179 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~-~~~~v~~~~~~~~~g~K~~aln~gl~~a~~ 179 (526)
+..+.++.+++++.+.... +++ ++|.+....+.. +..++++.. -.....+. .... +...++..|++....
T Consensus 29 ~g~pli~~~l~~l~~~~~~-~~i-~vv~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~-~~~~~i~~~l~~~~~ 99 (236)
T 2vsh_A 29 GDRPILIHTIEKFVLEPSI-EKI-VVGVHGDWVSHA----EDLVDKYLPLYKERIIIT--KGGA-DRNTSIKNIIEAIDA 99 (236)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CCE-EEEECGGGHHHH----HHHHHHHCGGGGGGEEEE--ECCS-SHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHcCCCC-CeE-EEEeCHHHHHHH----HHHHHhccccccCceEEE--CCCC-chHHHHHHHHHHHHh
Confidence 3457899999998865322 233 334443221222 222233310 00122222 1112 356667777776521
Q ss_pred --c--CCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 180 --K--QCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 180 --~--~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
. +.|+++++++|. .++++.+++++..+.++
T Consensus 100 ~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2vsh_A 100 YRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNH 134 (236)
T ss_dssp HSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHS
T ss_pred hccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 1 348999999998 77999999999877544
No 48
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=71.70 E-value=30 Score=31.50 Aligned_cols=92 Identities=14% Similarity=0.140 Sum_probs=51.7
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeC-CCCCCCccHHHHHhhhhcc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRD-SRNGYKAGALKEGMKHSYV 179 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~-~~~g~K~~aln~gl~~a~~ 179 (526)
+..+.++.+++++.+... +++ +++.++ + ... +.++++ + +.++.++ ...+|.+ .+..+++....
T Consensus 25 ~gkpli~~~l~~l~~~~~--~~i-vvv~~~--~-~i~----~~~~~~---~--~~~~~~~~~~~~g~~-~~~~~~~~l~~ 88 (262)
T 1vic_A 25 KGKPMIQHVFEKALQSGA--SRV-IIATDN--E-NVA----DVAKSF---G--AEVCMTSVNHNSGTE-RLAEVVEKLAI 88 (262)
T ss_dssp TTEEHHHHHHHHHHHTTC--SEE-EEEESC--H-HHH----HHHHHT---T--CEEEECCCSSCCHHH-HHHHHHHHTTC
T ss_pred CCeEHHHHHHHHHHhCCC--ceE-EEECCc--H-HHH----HHHHhc---C--CEEEECCccccCChH-HHHHHHHHhcc
Confidence 344789999999987654 333 334442 2 222 222222 3 3334332 3333333 33333333211
Q ss_pred cCCcEEEEecCCC-CCChHHHHHHHhhhhc
Q 009761 180 KQCDYVAIFDADF-EPEPDFLWRTIPFLVH 208 (526)
Q Consensus 180 ~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 208 (526)
.+.|+++++++|. .++++.+.+++..+.+
T Consensus 89 ~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 118 (262)
T 1vic_A 89 PDNEIIVNIQGDEPLIPPVIVRQVADNLAK 118 (262)
T ss_dssp CTTCEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcCccCHHHHHHHHHHHHh
Confidence 1578999999998 5689999999987643
No 49
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=70.69 E-value=9.2 Score=35.93 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=54.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.++. +.+..+++.+..... ++ +++|..+.+.+..+ +...+-...+.++.+...+.+ .|-++++..|.+
T Consensus 27 llpi~gk-pli~~~l~~l~~~gi--~~-I~vv~~~~~~~~i~----~~l~~g~~~g~~i~~~~~~~~-~G~~~al~~a~~ 97 (293)
T 1fxo_A 27 LLPVYDK-PMIYYPLSTLMLAGI--RE-ILIISTPQDTPRFQ----QLLGDGSNWGLDLQYAVQPSP-DGLAQAFLIGES 97 (293)
T ss_dssp GSEETTE-ETTHHHHHHHHHTTC--CE-EEEEECTTTHHHHH----HHHTTSGGGTCEEEEEECSSC-CCGGGHHHHTHH
T ss_pred eCeECCE-eHHHHHHHHHHHCCC--CE-EEEEeccccHHHHH----HHHhcccccCceEEEeeCCCC-CCHHHHHHHHHH
Confidence 4666765 677888888876542 23 33344332233222 222210011455656643333 448888888888
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
.. ..|-++++.+|....+..+.+++...
T Consensus 98 ~i---~~~~~~lv~gD~~~~~~~l~~~l~~~ 125 (293)
T 1fxo_A 98 FI---GNDLSALVLGDNLYYGHDFHELLGSA 125 (293)
T ss_dssp HH---TTSEEEEEETTEEEECTTHHHHHHHH
T ss_pred Hh---CCCCEEEEECChhccCccHHHHHHHH
Confidence 76 44544445599766435677777765
No 50
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=70.38 E-value=18 Score=31.93 Aligned_cols=89 Identities=12% Similarity=0.159 Sum_probs=53.0
Q ss_pred ChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccC
Q 009761 102 EKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQ 181 (526)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~ 181 (526)
....++.+++.+.+.... +++ ++|.+.. +. + ..+... . +.++.+.. +..+ ...++..|++.. .+
T Consensus 29 g~pli~~~l~~l~~~~~~-~~i-~vv~~~~-~~--~-~~~~~~---~--~~~v~~~~--~~~~-~~~~i~~al~~~--~~ 92 (223)
T 2xwl_A 29 GTPLLEHALSGLRASGVI-DRI-VIAVPPA-LT--D-ESKLVF---G--GEDSVIVS--GGVD-RTESVALALEAA--GD 92 (223)
T ss_dssp TEEHHHHHHHHHHHHSCC-SEE-EEEECGG-GH--H-HHHHHT---C--BTTEEEEE--CCSS-HHHHHHHHHTTC--TT
T ss_pred CeEHHHHHHHHHhcCCCC-CeE-EEEEccc-HH--H-HHHHHh---c--cCCeEEEc--CCCC-HHHHHHHHHHhc--CC
Confidence 457888888888765322 233 3344432 11 1 111111 0 23455542 2222 466777777765 25
Q ss_pred CcEEEEecCCC-CCChHHHHHHHhhh
Q 009761 182 CDYVAIFDADF-EPEPDFLWRTIPFL 206 (526)
Q Consensus 182 ~d~v~~lDaD~-~~~pd~L~~lv~~~ 206 (526)
.|+++++++|. .++++.+++++..+
T Consensus 93 ~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 93 AEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 68999999998 56899999999876
No 51
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=70.14 E-value=44 Score=29.45 Aligned_cols=96 Identities=17% Similarity=0.115 Sum_probs=56.3
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.++.+++.+.+.... +++ ++|.... ++..+. . .++. ...+.+. ++.. +..+++..|++.....
T Consensus 32 ~gkpli~~~l~~l~~~~~~-~~i-vvv~~~~-~~~~~~-~----~~~~--~~~i~~~--~~~~-~~~~si~~~l~~~~~~ 98 (231)
T 1vgw_A 32 GSKTVLEHVLGIFERHEAV-DLT-VVVVSPE-DTFADK-V----QTAF--PQVRVWK--NGGQ-TRAETVRNGVAKLLET 98 (231)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CEE-EEECCTT-CSTHHH-H----HHHC--TTSEEEC--CCCS-SHHHHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHcCCCC-CeE-EEEECcc-HHHHHH-H----HhcC--CCceEEE--cCCC-cHHHHHHHHHHHHhhh
Confidence 4557899999998865422 233 3344322 223332 1 1221 1234443 2222 3677777887765210
Q ss_pred ----CCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 181 ----QCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 181 ----~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
+.|.++++++|. ..+++.+.+++..+.++
T Consensus 99 ~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~ 132 (231)
T 1vgw_A 99 GLAAETDNILVHDAARCCLPSEALARLIEQAGNA 132 (231)
T ss_dssp SSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTC
T ss_pred ccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc
Confidence 368999999996 55899999999877444
No 52
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=69.99 E-value=20 Score=33.74 Aligned_cols=101 Identities=13% Similarity=0.078 Sum_probs=57.9
Q ss_pred EEecC-CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCC-------------
Q 009761 96 QIPMY-NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDS------------- 161 (526)
Q Consensus 96 iIp~y-ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~------------- 161 (526)
++|.- +....++.+++.+.+... +++ ++|......+... +.....+ ..+.++.+.....
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~~~--~~i-~vv~~~~~~~~~~---~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~ 97 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRAGF--GRL-VFVIRHSFEKEFR---EKILTKY-EGRIPVELVFQELDRLPEGFSCPEGR 97 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHHTC--CEE-EEEECGGGHHHHH---HHTHHHH-TTTSCEEEEECCTTCCCTTCCCCTTC
T ss_pred EeEcCCCCeeHHHHHHHHHHHCCC--CeE-EEEcCchHHHHHH---HHHHHHh-ccCCcEEEEecccccccccccccccc
Confidence 45663 344788899988876542 233 3344322112222 2222221 1235566664431
Q ss_pred -CCCCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhh
Q 009761 162 -RNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLV 207 (526)
Q Consensus 162 -~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~ 207 (526)
...|-++|+..+.+.. +.++ +++.+|...+++.+++++....
T Consensus 98 ~~~~Gt~~al~~a~~~i---~~~~-lV~~gD~l~~~~~~~~l~~~~~ 140 (303)
T 3pnn_A 98 EKPWGTNHAVLMGRDAI---REPF-AVINADDFYGRNGFEVLARKLM 140 (303)
T ss_dssp CSCCCHHHHHHTTTTTC---CSCE-EEEESSCBCCHHHHHHHHHHHH
T ss_pred cccCCcHHHHHHHHHhc---CCCE-EEEECCeecCHHHHHHHHHHHH
Confidence 2234677777777765 5454 5567999999999999998774
No 53
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=68.70 E-value=7.1 Score=34.85 Aligned_cols=94 Identities=10% Similarity=0.039 Sum_probs=54.3
Q ss_pred ChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccC
Q 009761 102 EKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQ 181 (526)
Q Consensus 102 e~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~ 181 (526)
..+.++.+++.+.+...- + .+++|.+. .++. +.+....++ +.++.++. +.. +..+++..|++... .+
T Consensus 31 g~pli~~~l~~l~~~~~~-~-~ivvv~~~-~~~~---~~~~~~~~~---~~~v~~~~--~~~-~~~~sv~~al~~~~-~~ 97 (228)
T 2yc3_A 31 GQPIALYSFFTFSRMPEV-K-EIVVVCDP-FFRD---IFEEYEESI---DVDLSFAI--PGK-ERQDSVYSGLQEID-VN 97 (228)
T ss_dssp TEEHHHHHHHHHHHCTTE-E-EEEEECCG-GGHH---HHHTTTTTS---SSEEEEEC--CCS-SHHHHHHHHHTTSC-TT
T ss_pred CEEHHHHHHHHHHcCCCC-C-eEEEEECh-HHHH---HHHHHHHhC---CCcEEEEC--CCC-CHHHHHHHHHHhhc-cC
Confidence 346888999988765221 2 23334333 2211 222121111 23455542 222 35677788887651 13
Q ss_pred CcEEEEecCCC-CCChHHHHHHHhhhhc
Q 009761 182 CDYVAIFDADF-EPEPDFLWRTIPFLVH 208 (526)
Q Consensus 182 ~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 208 (526)
.++++++|+|. .++++.+++++..+.+
T Consensus 98 ~~~vl~~d~d~P~~~~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 98 SELVCIHDSARPLVNTEDVEKVLKDGSA 125 (228)
T ss_dssp CSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCccCCHHHHHHHHHHHHh
Confidence 58999999996 6789999999987743
No 54
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=68.65 E-value=14 Score=31.85 Aligned_cols=94 Identities=11% Similarity=0.102 Sum_probs=52.6
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.++.+++.+.+... ++++| +.+.. ++...+..+ +.+. ...++.++. .. ..|..+++..|++..
T Consensus 25 ~g~pli~~~l~~l~~~~~--~~v~v-v~~~~-~~~i~~~~~---~~~~-~~~~~~~~~-~~-~~g~~~si~~al~~~--- 91 (196)
T 3rsb_A 25 CGRCLIDYVVSPLLKSKV--NNIFI-ATSPN-TPKTKEYIN---SAYK-DYKNIVVID-TS-GKGYIEDLNECIGYF--- 91 (196)
T ss_dssp TTEEHHHHHHHHHHSSSC--CCEEE-ECCTT-CHHHHHHHH---HHTT-TTTEEEE----------CCCCCTTTTTC---
T ss_pred CCEEHHHHHHHHHHHCCC--CEEEE-EeCCC-hHHHHHHHH---hhcc-CCCCEEEEE-CC-CCCcHHHHHHHHHhC---
Confidence 345789999999987652 33333 44332 333222222 1121 112444442 22 223556666666654
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhhhc
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFLVH 208 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 208 (526)
.|.++++++|. .++++.+++++..+.+
T Consensus 92 -~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 92 -SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp -SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred -CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 68999999997 5699999999988853
No 55
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=68.14 E-value=16 Score=32.67 Aligned_cols=94 Identities=14% Similarity=0.149 Sum_probs=56.1
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.++.+++.+.+.... ++ +++|.+...+ .... . ..+. ..++.++ .+ .. |...++..|++.. .
T Consensus 33 ~g~pll~~~i~~l~~~~~~-~~-ivvv~~~~~~-~~~~-~----~~~~--~~~v~~~-~~-~~-g~~~~i~~al~~~--~ 97 (236)
T 1i52_A 33 GNQTILEHSVHALLAHPRV-KR-VVIAISPGDS-RFAQ-L----PLAN--HPQITVV-DG-GD-ERADSVLAGLKAA--G 97 (236)
T ss_dssp TTEEHHHHHHHHHHTSTTE-EE-EEEEECTTCC-SGGG-S----GGGG--CTTEEEE-EC-CS-SHHHHHHHHHHTS--T
T ss_pred CCEEHHHHHHHHHHhCCCC-Ce-EEEEeCccHH-HHHH-H----HhcC--CCCEEEE-CC-CC-CHHHHHHHHHHhc--C
Confidence 4457899999998765321 22 3334443222 2221 1 1111 1245444 22 22 3667788888776 1
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
+.|.++++++|. .++++.+.+++..+.++
T Consensus 98 ~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 127 (236)
T 1i52_A 98 DAQWVLVHDAARPCLHQDDLARLLALSETS 127 (236)
T ss_dssp TCSEEEECCTTCTTCCHHHHHHHHGGGGTC
T ss_pred CCCEEEEEcCccccCCHHHHHHHHHHHHhc
Confidence 378999999997 46899999999877444
No 56
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=65.25 E-value=13 Score=37.42 Aligned_cols=96 Identities=8% Similarity=0.003 Sum_probs=58.6
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhh
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKH 176 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~ 176 (526)
+|.-+ .+.++.+++.+.+... +++ +++.... ++. +.+ . . ..++.++. +....|.++++..+++.
T Consensus 34 ~~i~g-kpli~~~l~~l~~~g~--~~i-ivv~~~~-~~~---i~~-~---~---~~~i~~v~-~~~~~G~~~sl~~a~~~ 97 (468)
T 1hm9_A 34 HKVAG-ISMLEHVFRSVGAIQP--EKT-VTVVGHK-AEL---VEE-V---L---AGQTEFVT-QSEQLGTGHAVMMTEPI 97 (468)
T ss_dssp SEETT-EEHHHHHHHHHHTTCC--SEE-EEEECTT-HHH---HHH-S---S---SSSSEEEE-CSSCCCHHHHHHTTHHH
T ss_pred eEECC-ccHHHHHHHHHHhcCC--CCE-EEEECCC-HHH---HHH-H---h---CCCcEEEe-CCccCChHHHHHHHHHH
Confidence 45544 4889999999987642 333 3344332 222 221 1 1 11455553 33333477888888877
Q ss_pred hcccCCcEEEEecCCCC-CChHHHHHHHhhhhcC
Q 009761 177 SYVKQCDYVAIFDADFE-PEPDFLWRTIPFLVHN 209 (526)
Q Consensus 177 a~~~~~d~v~~lDaD~~-~~pd~L~~lv~~~~~~ 209 (526)
.. ...|.++++++|.. +.++.+++++..++++
T Consensus 98 ~~-~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~ 130 (468)
T 1hm9_A 98 LE-GLSGHTLVIAGDTPLITGESLKNLIDFHINH 130 (468)
T ss_dssp HT-TCCSEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred hc-cCCCeEEEEeCCccccCHHHHHHHHHHHHhc
Confidence 61 12689999999985 6889999999876443
No 57
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=65.10 E-value=16 Score=34.27 Aligned_cols=99 Identities=9% Similarity=0.054 Sum_probs=54.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.++. +.+..+++.+..... ++ +++|......+..+ +...+....+.++.+...+.+ .|-++++..|.+
T Consensus 28 llpi~gk-pli~~~l~~l~~~gi--~~-Iivv~~~~~~~~i~----~~l~~g~~~g~~i~~~~~~~~-~G~~~al~~a~~ 98 (295)
T 1lvw_A 28 LLPIYDK-PMIYYPLSVLMLAGI--RD-ILIISTPRDLPLYR----DLLGDGSQFGVRFSYRVQEEP-RGIADAFIVGKD 98 (295)
T ss_dssp GSEETTE-ETTHHHHHHHHHTTC--CE-EEEEECTTTHHHHH----HHHTTSGGGTSEEEEEECSSC-CCGGGHHHHTHH
T ss_pred ecEECCe-eHHHHHHHHHHHCCC--Ce-EEEEeccchHHHHH----HHhhhccccCceEEEeeCCCC-CChHHHHHHHHH
Confidence 4677774 678888888876542 23 33344322222222 222211012455666644443 347888888888
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
... +.+++++. +|....+..+.+++...
T Consensus 99 ~i~--~~~~~lv~-gD~~~~~~~l~~~l~~~ 126 (295)
T 1lvw_A 99 FIG--DSKVALVL-GDNVFYGHRFSEILRRA 126 (295)
T ss_dssp HHT--TSCEEEEE-TTCCEECTTHHHHHHHH
T ss_pred HhC--CCcEEEEE-CCccccCcCHHHHHHHH
Confidence 761 34566666 89776335667777665
No 58
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=64.78 E-value=27 Score=30.37 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccCCc
Q 009761 104 EVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQCD 183 (526)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d 183 (526)
..++.+++.+.+. .+++ ++|.++..+ + .+. ++.++..+....|-.+++..|++.. +.|
T Consensus 41 pll~~~l~~l~~~---~~~i-~vv~~~~~~---~--------~~~----~~~~v~~~~~~~g~~~~i~~al~~~---~~~ 98 (201)
T 2e8b_A 41 KVIERVYETAKSV---FKEV-YIVAKDREK---F--------SFL----NAPVVLDEFEESASIIGLYTALKHA---KEE 98 (201)
T ss_dssp HHHHHHHHHHHTT---CSEE-EEEESCSGG---G--------GGG----TCCEEECCCSSCCHHHHHHHHHHHC---SSS
T ss_pred EHHHHHHHHHHHh---CCEE-EEEeCcHHH---h--------hcC----CceEEecCCCCCCcHHHHHHHHHHc---CCC
Confidence 4677888888765 2333 334443222 1 111 2334433333345788889999887 789
Q ss_pred EEEEecCCCC-CChHHHHH-HH
Q 009761 184 YVAIFDADFE-PEPDFLWR-TI 203 (526)
Q Consensus 184 ~v~~lDaD~~-~~pd~L~~-lv 203 (526)
.++++++|.- ++++.+++ ++
T Consensus 99 ~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 99 NVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EEEEEETTCTTCCHHHHHHHHH
T ss_pred CEEEEeCCcCcCCHHHHHHHHh
Confidence 9999999975 48888888 76
No 59
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=64.60 E-value=5.9 Score=37.24 Aligned_cols=104 Identities=15% Similarity=0.099 Sum_probs=61.2
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHH---HHHHhhc-------------cCCcEEEEeeC
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVEL---ECQRWAS-------------KGINIKYEIRD 160 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~---~~~~~~~-------------~~~~v~~~~~~ 160 (526)
+|.-+ .+.++.+++.+.+... +++ ++|.+.. .+..++..+. ..++... .+.++.++..+
T Consensus 40 l~i~g-kpli~~~l~~l~~~g~--~~i-~vv~~~~-~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~~~~~ 114 (297)
T 2ux8_A 40 LPVVD-RPLIQYAVDEAVEAGI--EQM-IFVTGRG-KSALEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAYVRQQ 114 (297)
T ss_dssp CEETT-EEHHHHHHHHHHHTTC--CEE-EEEECTT-CHHHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEEEECC
T ss_pred eeECC-eEHHHHHHHHHHhCCC--CEE-EEEeCCC-HHHHHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEEEeCC
Confidence 45544 4788999999887642 233 3354433 2222212110 0000000 23457666433
Q ss_pred CCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCC--hHHHHHHHhhhhcC
Q 009761 161 SRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPE--PDFLWRTIPFLVHN 209 (526)
Q Consensus 161 ~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~--pd~L~~lv~~~~~~ 209 (526)
...|-++++..+.+.. +.|.++++.+|...+ +..+.+++....++
T Consensus 115 -~~~Gt~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~ 161 (297)
T 2ux8_A 115 -EPMGLGHAVWCARDIV---GDEPFAVLLPDDFMFGQPGCLKQMVDAYNKV 161 (297)
T ss_dssp -SCCCHHHHHHTTHHHH---CSSCEEEECTTEEEESSSCHHHHHHHHHHHH
T ss_pred -CCCChHHHHHHHHHHc---CCCcEEEEeCCeecCCChHHHHHHHHHHHhc
Confidence 3334788888888776 668899999998887 67899988876433
No 60
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=63.22 E-value=6.5 Score=35.33 Aligned_cols=87 Identities=13% Similarity=0.022 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhcccCC
Q 009761 103 KEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVKQC 182 (526)
Q Consensus 103 ~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~ 182 (526)
...++.+++++.+. . ++++| |. ...+ . +.+...+++ +.++.++..+....|-++++..|++.. +.
T Consensus 45 ~pli~~~l~~l~~~-~--~~i~v-v~-~~~~-~---~~~~~~~~~---~~~~~~v~~~~~~~g~~~~i~~a~~~~---~~ 109 (232)
T 2xme_A 45 CEIILRTMKLLSPH-V--SEFII-VA-SRYA-D---DIDAFLKDK---GFNYKIVRHDRPEKGNGYSLLVAKNHV---ED 109 (232)
T ss_dssp EEHHHHHHHHHGGG-E--EEEEE-EE-STTH-H---HHHHHHTTS---CCCEEEEECSCGGGCHHHHHHTTGGGC---CS
T ss_pred EEHHHHHHHHHHHh-C--CEEEE-Ee-CChH-H---HHHHHHHhc---CCcEEEEECCCCCCCcHHHHHHHHHHC---CC
Confidence 47888999988765 2 33333 44 3222 2 222222222 345666643333234677788888776 54
Q ss_pred cEEEEecCCCCCChHHHHHHHhh
Q 009761 183 DYVAIFDADFEPEPDFLWRTIPF 205 (526)
Q Consensus 183 d~v~~lDaD~~~~pd~L~~lv~~ 205 (526)
.++++.+|...+++.+++++..
T Consensus 110 -~~lv~~~D~p~~~~~~~~l~~~ 131 (232)
T 2xme_A 110 -RFILTMGDHVYSQQFIEKAVRG 131 (232)
T ss_dssp -SEEEEETTEEECHHHHHHHTTC
T ss_pred -CEEEEcCCcccCHHHHHHHHhC
Confidence 4567889987788888887653
No 61
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=56.98 E-value=29 Score=33.74 Aligned_cols=88 Identities=11% Similarity=0.117 Sum_probs=54.6
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+..+.++.+++.+.+.... +++ ++|.+ .++. + ++. -.++.++ .... +...++..|++..
T Consensus 29 ~GkPLi~~~l~~l~~~~~~-~~I-vVvt~--~~~~---i-~~~-------~~~v~~v--~~g~-g~~~sv~~aL~~l--- 87 (371)
T 1w55_A 29 GNDPLWLYATKNLSSFYPF-KKI-VVTSS--NITY---M-KKF-------TKNYEFI--EGGD-TRAESLKKALELI--- 87 (371)
T ss_dssp BTEEHHHHHHHHHHTTSCC-SCE-EEEES--CHHH---H-HTT-------CSSSEEE--ECCS-SHHHHHHHHHTTC---
T ss_pred CCeEHHHHHHHHHHccCCC-CeE-EEEcC--CHHH---H-HHH-------hCCCEEE--eCCC-ChHHHHHHHHHhc---
Confidence 3457889999988763322 233 43555 2221 1 111 0113444 2222 2557788888877
Q ss_pred CCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 181 QCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 181 ~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
+.|+++++|+|. .++++.+++++..+.++
T Consensus 88 ~~d~vlv~~~D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 88 DSEFVMVSDVARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp CSSEEEEEETTCTTCCHHHHHHHHTTGGGC
T ss_pred CCCeEEEEeCCcccCCHHHHHHHHHHHHhc
Confidence 689999999997 56999999999877443
No 62
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=55.75 E-value=18 Score=33.89 Aligned_cols=55 Identities=13% Similarity=-0.113 Sum_probs=38.4
Q ss_pred CCcEEEEeeCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCC----hH---HHHHHHhhhhcC
Q 009761 151 GINIKYEIRDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPE----PD---FLWRTIPFLVHN 209 (526)
Q Consensus 151 ~~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~----pd---~L~~lv~~~~~~ 209 (526)
+.++.+.... ...|-++++..+.+.. +.|.++++.+|...+ ++ .+.+++....++
T Consensus 101 ~~~i~~~~~~-~~~Gt~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~ 162 (302)
T 2e3d_A 101 HVTIMQVRQG-LAKGLGHAVLCAHPVV---GDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDET 162 (302)
T ss_dssp TCEEEEEECS-SCCCHHHHHHHTHHHH---CSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHH
T ss_pred CcceEEeeCC-ccCCHHHHHHHHHHHc---CCCcEEEEcCCccccCccccchHHHHHHHHHHHHhc
Confidence 3455565333 3344788888888877 567899999998876 45 688888766433
No 63
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=54.93 E-value=97 Score=30.23 Aligned_cols=107 Identities=14% Similarity=0.010 Sum_probs=58.1
Q ss_pred CCcEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcC-CCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCcc
Q 009761 90 YPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDD-STDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAG 168 (526)
Q Consensus 90 ~P~VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~-s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~ 168 (526)
-++++.+|-++++.+.+++.++++ ..|...+.| -+|. +++...+ ........ ..++.+........-.+.
T Consensus 83 ~~kiAflil~h~d~~~l~rll~~l---y~p~n~y~I-HvD~ks~~~~~~-~~~~~~~~----f~NV~v~~~~~~v~WGg~ 153 (391)
T 2gak_A 83 GFPIAYSIVVHHKIEMLDRLLRAI---YMPQNFYCI-HVDRKAEESFLA-AVQGIASC----FDNVFVASQLESVVYASW 153 (391)
T ss_dssp TSCEEEEEEECSCHHHHHHHHHHH---CCTTSEEEE-EECTTSCHHHHH-HHHHHHHT----CTTEEECSSCCCCCTTSH
T ss_pred CCCEEEEEEecCCHHHHHHHHHHH---hCCCCeEEE-EEeCCCCHHHHH-HHHHHHhc----CCCEEEeccCcccccCCc
Confidence 357999999999888888888877 234433334 4454 4443222 22222222 357766632222221122
Q ss_pred HHH----HHhhhhcc--cCCcEEEEecCCCCC--ChHHHHHHHhh
Q 009761 169 ALK----EGMKHSYV--KQCDYVAIFDADFEP--EPDFLWRTIPF 205 (526)
Q Consensus 169 aln----~gl~~a~~--~~~d~v~~lDaD~~~--~pd~L~~lv~~ 205 (526)
.+. .+++.+.. .+.||++.+-+++.| +.+.+.+.+..
T Consensus 154 S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~ 198 (391)
T 2gak_A 154 TRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKC 198 (391)
T ss_dssp HHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHh
Confidence 222 23333322 267898888888777 45566555443
No 64
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=53.31 E-value=18 Score=34.02 Aligned_cols=99 Identities=10% Similarity=0.024 Sum_probs=53.4
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|.++. +.+..+++.+..... ++ +++|......+..+ +...+....+.++.+...+.+ .|-++++..|.+
T Consensus 28 llpi~gk-pli~~~l~~l~~~gi--~~-I~vv~~~~~~~~i~----~~l~~g~~~g~~i~~~~~~~~-~G~~~al~~a~~ 98 (296)
T 1mc3_A 28 LLPIYDK-PMIYYPLSVLMLAGI--RE-ILIITTPEDKGYFQ----RLLGDGSEFGIQLEYAEQPSP-DGLAQAFIIGET 98 (296)
T ss_dssp GSEETTE-ETTHHHHHHHHHTTC--CE-EEEEECTTTHHHHH----HHHTTSGGGTCEEEEEECSSC-CCSTHHHHHTHH
T ss_pred eeEECCe-eHHHHHHHHHHhCCC--Cc-EEEEechhHHHHHH----HHHhcccccCceEEEeccCCC-CCHHHHHHHHHH
Confidence 4666764 677788888776532 23 33344322222222 222221112455666644433 447888888888
Q ss_pred hhcccCCcEEEEecCCCCCChHHHHHHHhhh
Q 009761 176 HSYVKQCDYVAIFDADFEPEPDFLWRTIPFL 206 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~ 206 (526)
... +.+++++. +|....+..+.+++...
T Consensus 99 ~i~--~~~~~lv~-gD~~~~~~~l~~~l~~~ 126 (296)
T 1mc3_A 99 FLN--GEPSCLVL-GDNIFFGQGFSPKLRHV 126 (296)
T ss_dssp HHT--TSCEEEEE-TTEEEECSSCHHHHHHH
T ss_pred HhC--CCCEEEEE-CCccccccCHHHHHHHH
Confidence 761 34566655 88765334566776655
No 65
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=48.46 E-value=19 Score=34.18 Aligned_cols=57 Identities=14% Similarity=-0.115 Sum_probs=38.0
Q ss_pred CcEEEEeeCCCCCCCccHHHHHhhhhcccCCcEEEEecCCCCCC-hHHHHHHHhhhhcCC
Q 009761 152 INIKYEIRDSRNGYKAGALKEGMKHSYVKQCDYVAIFDADFEPE-PDFLWRTIPFLVHNP 210 (526)
Q Consensus 152 ~~v~~~~~~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~-pd~L~~lv~~~~~~~ 210 (526)
.++.++..+.. .|-++++..+.+... .+.|.++++.+|...+ +..+.+++..+.++.
T Consensus 105 ~~i~~~~~~~~-~Gt~~al~~a~~~l~-~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~ 162 (323)
T 2pa4_A 105 IKAVPVTQDKP-LGLGHAVGLAESVLD-DDEDVVAVMLPDDLVLPTGVMERMAQVRAEFG 162 (323)
T ss_dssp CEEEEEECSSC-CCHHHHHHTTGGGSC-SSCCEEEEECTTEEEESSCHHHHHHHHHHTTC
T ss_pred cceEEEeCCcc-CCcHHHHHHHHHHhc-CCCCeEEEEeCCcccCchHHHHHHHHHHHhcC
Confidence 45656543333 457888887777651 1235689999998886 588999988774443
No 66
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=46.45 E-value=1.6e+02 Score=26.33 Aligned_cols=48 Identities=13% Similarity=0.162 Sum_probs=36.3
Q ss_pred CCCCCCCccHHHHHhhhhcccCCcEEEEecCC-CCCChHHHHHHHhhhh
Q 009761 160 DSRNGYKAGALKEGMKHSYVKQCDYVAIFDAD-FEPEPDFLWRTIPFLV 207 (526)
Q Consensus 160 ~~~~g~K~~aln~gl~~a~~~~~d~v~~lDaD-~~~~pd~L~~lv~~~~ 207 (526)
++..+|-+..++.|++.+....++-++++-+| -.++++.|.+++..+.
T Consensus 81 ~q~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 81 AQQGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp ECCSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTT
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhc
Confidence 34555688888999887633356789999999 4558999999998873
No 67
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=44.33 E-value=1.2e+02 Score=27.82 Aligned_cols=116 Identities=4% Similarity=-0.051 Sum_probs=56.6
Q ss_pred cEEEEEecCCCh--HHHHHHHHHHHcCCCCCCceEEEEE-cCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc-
Q 009761 92 MVLVQIPMYNEK--EVYQLSIGAACGLSWPSDRITIQVL-DDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA- 167 (526)
Q Consensus 92 ~VsViIp~yne~--~~l~~~L~sl~~q~yp~~~~~I~V~-D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~- 167 (526)
.+.|++.+ |+. ..+..++.|++..+- ...+.++|. |+-+++..+ ..+...+++ +..++.+.-+... .+.
T Consensus 5 ~i~I~~~~-d~~Y~~~~~v~i~Sl~~~~~-~~~~~~~il~~~is~~~~~-~L~~~~~~~---~~~i~~~~~~~~~-~~~~ 77 (276)
T 3tzt_A 5 ADALLLTL-DENYIPQMKVLMTSIYINNP-GRIFDVYLIHSRISEDKLK-DLGEDLKKF---SYTLYPIRATDDL-FSFA 77 (276)
T ss_dssp CEEEEEEC-CGGGHHHHHHHHHHHHHHST-TCCEEEEEEESCCCHHHHH-HHHHHHHTT---TCEEEEEECC--------
T ss_pred eEEEEEEe-CHhHHHHHHHHHHHHHHhCC-CCceEEEEEeCCCCHHHHH-HHHHHHHHc---CCEEEEEEeCHHH-HhcC
Confidence 36666544 443 788889999986542 234555444 554444444 344443332 4455555333211 010
Q ss_pred -----c-HHHHH---hhhhcccCCcEEEEecCCCCCChHHHHHHHh-hhhcCCCEEEEe
Q 009761 168 -----G-ALKEG---MKHSYVKQCDYVAIFDADFEPEPDFLWRTIP-FLVHNPDIALVQ 216 (526)
Q Consensus 168 -----~-aln~g---l~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~-~~~~~~~v~~V~ 216 (526)
. -.+.. +......+.|-++.+|+|.++..|. .++.. .+ ++..+++|.
T Consensus 78 ~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di-~~L~~~dl-~~~~~aav~ 134 (276)
T 3tzt_A 78 KVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPL-DDLLRTDI-SDYILAAAS 134 (276)
T ss_dssp ------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCS-HHHHTCCC-TTSSEEEEE
T ss_pred ccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCH-HHHhhcCC-CCCeEEEEE
Confidence 0 01111 1111112579999999998886542 23332 23 333466653
No 68
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=41.63 E-value=95 Score=27.54 Aligned_cols=41 Identities=7% Similarity=0.065 Sum_probs=33.4
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCC-CCChHHHHHHHhhhhcC
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVHN 209 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~~ 209 (526)
...++..|++.. +.|+++++++|. .++++.+.+++..+.++
T Consensus 93 ~~~~i~~al~~~---~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2px7_A 93 RQASVARLLEAA---SLPLVLVHDVARPFVSRGLVARVLEAAQRS 134 (236)
T ss_dssp HHHHHHHHHHHC---CSSEEEECCTTCCCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHc---CCCeEEEecCccccCCHHHHHHHHHHHHhc
Confidence 567788888877 689999999996 56999999999877433
No 69
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=40.86 E-value=43 Score=29.63 Aligned_cols=43 Identities=7% Similarity=0.040 Sum_probs=31.4
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCC-CCChHHHHHHHhhhhc
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADF-EPEPDFLWRTIPFLVH 208 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~-~~~pd~L~~lv~~~~~ 208 (526)
...++..|++.+...+.|+++++++|. .++++.+.+++..+.+
T Consensus 91 ~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~ 134 (234)
T 1vpa_A 91 RSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARE 134 (234)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHh
Confidence 445577777765211368999999997 6799999999987743
No 70
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=36.20 E-value=1.2e+02 Score=28.39 Aligned_cols=87 Identities=11% Similarity=0.086 Sum_probs=43.1
Q ss_pred HHHHHHHHHH-HcCCCCCCceEEE-EEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCC------C-CCCccHHHH--
Q 009761 104 EVYQLSIGAA-CGLSWPSDRITIQ-VLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSR------N-GYKAGALKE-- 172 (526)
Q Consensus 104 ~~l~~~L~sl-~~q~yp~~~~~I~-V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~------~-g~K~~aln~-- 172 (526)
..+..++.|+ +..+ + ..+.++ +.|+-+++..+ ..+...+.+ +..+..+.-+.. . .+.-...+.
T Consensus 13 ~~~~vli~Sl~l~~~-~-~~~~f~il~~~ls~~~~~-~L~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~R 86 (311)
T 1g9r_A 13 AYLCVAAKSVEAAHP-D-TEIRFHVLDAGISEANRA-AVAANLRGG---GGNIRFIDVNPEDFAGFPLNIRHISITTYAR 86 (311)
T ss_dssp HHHHHHHHHHHHTCT-T-SCCEEEEEESSCCHHHHH-HHHHHSGGG---TTTEEEEECCGGGGTTSCCCCTTCCGGGGGG
T ss_pred HHHHHHHHHHHHHcC-C-CCceEEEEECCCCHHHHH-HHHHHHHHc---CCEEEEEEcCHHHHhcCccccccCCHHHHHH
Confidence 6778889999 6543 2 234443 44554554444 333333322 455655532211 0 100000111
Q ss_pred -HhhhhcccCCcEEEEecCCCCCChH
Q 009761 173 -GMKHSYVKQCDYVAIFDADFEPEPD 197 (526)
Q Consensus 173 -gl~~a~~~~~d~v~~lDaD~~~~pd 197 (526)
.+... .++.|-|+.+|+|.++..|
T Consensus 87 l~l~~l-l~~~~kvlyLD~D~iv~~d 111 (311)
T 1g9r_A 87 LKLGEY-IADCDKVLYLDIDVLVRDS 111 (311)
T ss_dssp GGHHHH-CCSCSCEEEECSSEEECSC
T ss_pred HHHHHH-hhhcCEEEEEcCCeEeccC
Confidence 11111 1367899999999888655
No 71
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=35.97 E-value=2.3e+02 Score=24.95 Aligned_cols=94 Identities=11% Similarity=0.004 Sum_probs=56.8
Q ss_pred EEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHH
Q 009761 93 VLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKE 172 (526)
Q Consensus 93 VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~ 172 (526)
.-|.|-+-+....++..++.+.+...+ .++..++.|. .|....+. +++ .+..+.+... ...+..++..
T Consensus 9 ~ri~vl~SG~gsnl~all~~~~~~~~~-~~I~~Vis~~-~~a~~l~~----A~~---~gIp~~~~~~---~~~~~~~~~~ 76 (215)
T 3kcq_A 9 LRVGVLISGRGSNLEALAKAFSTEESS-VVISCVISNN-AEARGLLI----AQS---YGIPTFVVKR---KPLDIEHIST 76 (215)
T ss_dssp EEEEEEESSCCHHHHHHHHHTCCC-CS-EEEEEEEESC-TTCTHHHH----HHH---TTCCEEECCB---TTBCHHHHHH
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCC-cEEEEEEeCC-cchHHHHH----HHH---cCCCEEEeCc---ccCChHHHHH
Confidence 445555667888899999988665554 3444444543 33222112 222 2555544421 2224456666
Q ss_pred HhhhhcccCCcEEEEecCCCCCChHHHHH
Q 009761 173 GMKHSYVKQCDYVAIFDADFEPEPDFLWR 201 (526)
Q Consensus 173 gl~~a~~~~~d~v~~lDaD~~~~pd~L~~ 201 (526)
.++.. +.|+++..---.++++++++.
T Consensus 77 ~L~~~---~~Dlivlagy~~IL~~~~l~~ 102 (215)
T 3kcq_A 77 VLREH---DVDLVCLAGFMSILPEKFVTD 102 (215)
T ss_dssp HHHHT---TCSEEEESSCCSCCCHHHHHH
T ss_pred HHHHh---CCCEEEEeCCceEeCHHHHhh
Confidence 77776 899999999989999988754
No 72
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=33.79 E-value=1.1e+02 Score=27.57 Aligned_cols=94 Identities=7% Similarity=0.074 Sum_probs=51.2
Q ss_pred EEecCCChHHHHHHHHHHHc-CCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHh
Q 009761 96 QIPMYNEKEVYQLSIGAACG-LSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGM 174 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~-q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl 174 (526)
++|+.+. +.++.+|+++.+ ... ++++| |+....+ ....+++...++.. ..+.....++...|-++|+..+.
T Consensus 24 llpv~gk-pli~~~l~~l~~~~gi--~~iiv-v~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~Gt~~av~~a~ 95 (255)
T 4evw_A 24 MLEAHGQ-TLFEHSVNSFAAYFAS--TPFLF-IVRNVYD--TAVFVREKATQLGI--KQFYIAELHTETRGQAETVTLGL 95 (255)
T ss_dssp GCEETTE-EHHHHHHGGGGGGTTT--SCEEE-EEESSTT--HHHHHHHHHHHHTC--SSEEEEEESSCCSSHHHHHHHHH
T ss_pred ccEECCe-EHHHHHHHHHhccCCC--ceEEE-EECchhh--hHHHHHHHHHHcCC--CCceEEEeCCCCCCHHHHHHHHH
Confidence 3566554 789999999876 332 33444 4433222 22233333333311 12222223444445788998888
Q ss_pred hhhcc---cCCcEEEEecCCCCCChH
Q 009761 175 KHSYV---KQCDYVAIFDADFEPEPD 197 (526)
Q Consensus 175 ~~a~~---~~~d~v~~lDaD~~~~pd 197 (526)
+.... ...+-++++.+|....+.
T Consensus 96 ~~l~~~~~~~~~~~lV~~gD~l~~~~ 121 (255)
T 4evw_A 96 EELAKQGVDYQGSITVFNIDTFRPNF 121 (255)
T ss_dssp HHHHHTTCCCCSCEEECCTTEECTTC
T ss_pred HHHhhcccCCCCcEEEEeCCEEEecc
Confidence 76510 134568889999877443
No 73
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=30.31 E-value=2.8e+02 Score=24.24 Aligned_cols=96 Identities=16% Similarity=0.063 Sum_probs=55.8
Q ss_pred EEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc---cH
Q 009761 93 VLVQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA---GA 169 (526)
Q Consensus 93 VsViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~---~a 169 (526)
.-|.|-+-+....++..++++.+...+ .++..++.|. .|....+. +++ .+..+.+....+-.. |. ..
T Consensus 8 ~ri~vl~SG~gsnl~all~~~~~~~l~-~~I~~Visn~-~~a~~l~~----A~~---~gIp~~~~~~~~~~~-r~~~d~~ 77 (209)
T 4ds3_A 8 NRVVIFISGGGSNMEALIRAAQAPGFP-AEIVAVFSDK-AEAGGLAK----AEA---AGIATQVFKRKDFAS-KEAHEDA 77 (209)
T ss_dssp EEEEEEESSCCHHHHHHHHHHTSTTCS-EEEEEEEESC-TTCTHHHH----HHH---TTCCEEECCGGGSSS-HHHHHHH
T ss_pred ccEEEEEECCcHHHHHHHHHHHcCCCC-cEEEEEEECC-cccHHHHH----HHH---cCCCEEEeCccccCC-HHHHHHH
Confidence 345566677888899999998766554 3444445553 33222112 222 255655442211111 21 34
Q ss_pred HHHHhhhhcccCCcEEEEecCCCCCChHHHHH
Q 009761 170 LKEGMKHSYVKQCDYVAIFDADFEPEPDFLWR 201 (526)
Q Consensus 170 ln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~ 201 (526)
+...++.. +.|+++...=..++++++++.
T Consensus 78 ~~~~l~~~---~~Dliv~agy~~il~~~~l~~ 106 (209)
T 4ds3_A 78 ILAALDVL---KPDIICLAGYMRLLSGRFIAP 106 (209)
T ss_dssp HHHHHHHH---CCSEEEESSCCSCCCHHHHGG
T ss_pred HHHHHHhc---CCCEEEEeccccCcCHHHHhh
Confidence 45556666 899999998888889887743
No 74
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=27.13 E-value=2e+02 Score=28.33 Aligned_cols=105 Identities=10% Similarity=0.020 Sum_probs=55.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhh-c-----cCCcEEEEeeC-C-----CC
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWA-S-----KGINIKYEIRD-S-----RN 163 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~-~-----~~~~v~~~~~~-~-----~~ 163 (526)
++|.-|....++.+++.+.+... +++ ++|.....+ ...+..+ +.+. . ....+.++... . ..
T Consensus 45 llpi~g~~pli~~~l~~l~~~g~--~~i-~vv~~~~~~-~i~~~~~---~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 117 (451)
T 1yp2_A 45 AVPLGANYRLIDIPVSNCLNSNI--SKI-YVLTQFNSA-SLNRHLS---RAYASNMGGYKNEGFVEVLAAQQSPENPDWF 117 (451)
T ss_dssp GCEETTTEETTHHHHHHHHHTTC--CEE-EEEESCCCH-HHHHHHH---HHCC--------CCEEEEEESCSSTTSCCCC
T ss_pred eeEECCcceeHHHHHHHHHHCCC--CEE-EEEeccCHH-HHHHHHh---hhhhcccccccccCcEEEecccccccccccc
Confidence 45666665788888888877642 233 334444322 2221221 2210 0 01123343211 1 12
Q ss_pred CCCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhc
Q 009761 164 GYKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH 208 (526)
Q Consensus 164 g~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 208 (526)
.|-++++..+++.......|.++++.+|.+.+.+ +.+++....+
T Consensus 118 ~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~ 161 (451)
T 1yp2_A 118 QGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMD-YEKFIQAHRE 161 (451)
T ss_dssp CSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCC-HHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCC-HHHHHHHHHH
Confidence 3467788888776611125899999999866654 6777766533
No 75
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=24.98 E-value=2.2e+02 Score=26.94 Aligned_cols=18 Identities=22% Similarity=0.152 Sum_probs=14.8
Q ss_pred cCCcEEEEecCCCCCChH
Q 009761 180 KQCDYVAIFDADFEPEPD 197 (526)
Q Consensus 180 ~~~d~v~~lDaD~~~~pd 197 (526)
.+.|-|+.+|+|.++-.|
T Consensus 93 ~~ydrvlYLDaD~lv~~d 110 (333)
T 1ll2_A 93 TQYSKCVFMDADTLVLAN 110 (333)
T ss_dssp TTCSEEEEECTTEEECSC
T ss_pred cCCCeEEEEeCCEEeccC
Confidence 378999999999887544
No 76
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=24.44 E-value=1.1e+02 Score=29.83 Aligned_cols=105 Identities=10% Similarity=0.080 Sum_probs=55.8
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhc----cCCcEEEEeeCC----CC--CC
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWAS----KGINIKYEIRDS----RN--GY 165 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~----~~~~v~~~~~~~----~~--g~ 165 (526)
++|.-|....++.+++.+.+... +++ +++.+... +...+..+ +.+.. ....+.++.... +. .|
T Consensus 37 llpi~gk~pli~~~l~~l~~~gi--~~i-~vv~~~~~-~~i~~~~~---~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~G 109 (420)
T 3brk_X 37 AVYFGGKARIIDFALSNALNSGI--RRI-GVATQYKA-HSLIRHLQ---RGWDFFRPERNESFDILPASQRVSETQWYEG 109 (420)
T ss_dssp GSEETTTEETHHHHHHHHHHTTC--CEE-EEEECTTC-HHHHHHHH---HHSCCCCGGGTCEEEEECCC-------CCCC
T ss_pred ccccCCCCcHHHHHHHHHHhCCC--CeE-EEEeCCCh-HHHHHHHh---hhhccccccccCCEEEeCccccccCCccccC
Confidence 35666665788899998887642 233 33444432 22222221 11210 011244432111 21 34
Q ss_pred CccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhhc
Q 009761 166 KAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLVH 208 (526)
Q Consensus 166 K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~~ 208 (526)
-++++..+++.....+.|.++++.+|.+.+.+ +.+++..+.+
T Consensus 110 t~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~ 151 (420)
T 3brk_X 110 TADAVYQNIDIIEPYAPEYMVILAGDHIYKMD-YEYMLQQHVD 151 (420)
T ss_dssp HHHHHHTTHHHHHHHCCSEEEEEESSCEECBC-THHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEecccEEEchH-HHHHHHHHHH
Confidence 67788777766521135889999999966554 6777766533
No 77
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=24.08 E-value=1.5e+02 Score=26.16 Aligned_cols=77 Identities=8% Similarity=0.103 Sum_probs=49.4
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhhhhccc
Q 009761 101 NEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMKHSYVK 180 (526)
Q Consensus 101 ne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~~a~~~ 180 (526)
+....++.+++.+.+... + |+|+-+. + ..+ + ..++.+ .. ..|-++++..|++..
T Consensus 30 ~g~pll~~~l~~l~~~~~---~--ivvv~~~-~-~i~---~---------~~~~~~---~~-~~g~~~~i~~a~~~~--- 83 (232)
T 2dpw_A 30 RGRPMVEWVLEALYAAGL---S--PVYVGEN-P-GLV---P---------APALTL---PD-RGGLLENLEQALEHV--- 83 (232)
T ss_dssp TTEETHHHHHHHHHHTTC---E--EEEESCC-S-SCS---S---------CCSEEE---CC-CSSHHHHHHHHHHTC---
T ss_pred CCEEHHHHHHHHHHhcCC---E--EEEEeCh-H-HHh---h---------hcCeEe---cC-CCCHHHHHHHHHHHc---
Confidence 345788888888876642 2 3333221 2 111 1 013433 22 334778888888877
Q ss_pred CCcEEEEecCCCC-CChHHHHHHHh
Q 009761 181 QCDYVAIFDADFE-PEPDFLWRTIP 204 (526)
Q Consensus 181 ~~d~v~~lDaD~~-~~pd~L~~lv~ 204 (526)
+ |.++++++|.- ++++.+++++.
T Consensus 84 ~-~~~lv~~~D~P~~~~~~i~~l~~ 107 (232)
T 2dpw_A 84 E-GRVLVATGDIPHLTEEAVRFVLD 107 (232)
T ss_dssp C-SEEEEEETTCTTCCHHHHHHHHH
T ss_pred C-CCEEEEeCCcccCCHHHHHHHHh
Confidence 5 89999999985 68999999988
No 78
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=23.22 E-value=2.5e+02 Score=21.44 Aligned_cols=24 Identities=17% Similarity=0.274 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEE
Q 009761 104 EVYQLSIGAACGLSWPSDRITIQVL 128 (526)
Q Consensus 104 ~~l~~~L~sl~~q~yp~~~~~I~V~ 128 (526)
+..++.++.+-. .||.-.++++|.
T Consensus 62 edfrenireiwe-rypqldvvvivt 85 (162)
T 2l82_A 62 EDFRENIREIWE-RYPQLDVVVIVT 85 (162)
T ss_dssp HHHHHHHHHHHH-HCTTCCEEEEEE
T ss_pred HHHHHHHHHHHH-hCCCCcEEEEEe
Confidence 445555555442 467655544444
No 79
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=23.21 E-value=3.8e+02 Score=23.42 Aligned_cols=92 Identities=14% Similarity=0.088 Sum_probs=52.4
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCc---cHHHHH
Q 009761 97 IPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKA---GALKEG 173 (526)
Q Consensus 97 Ip~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~---~aln~g 173 (526)
|=+-+....++..+++..+-+.+. ++..++.|.. |....+.+ ++ .+..+.+....+-+. +. ..+...
T Consensus 7 vl~Sg~Gsnl~ali~~~~~~~l~~-eI~~Visn~~-~a~v~~~A----~~---~gIp~~~~~~~~~~~-r~~~d~~~~~~ 76 (211)
T 3p9x_A 7 IFASGSGTNAEAIIQSQKAGQLPC-EVALLITDKP-GAKVVERV----KV---HEIPVCALDPKTYPS-KEAYEIEVVQQ 76 (211)
T ss_dssp EECCTTCHHHHHHHHHHHTTCCSS-EEEEEEESCS-SSHHHHHH----HT---TTCCEEECCGGGSSS-HHHHHHHHHHH
T ss_pred EEEeCCchHHHHHHHHHHcCCCCc-EEEEEEECCC-CcHHHHHH----HH---cCCCEEEeChhhcCc-hhhhHHHHHHH
Confidence 333445678888888887666653 4555455543 32222122 22 255554442211111 21 244455
Q ss_pred hhhhcccCCcEEEEecCCCCCChHHHHH
Q 009761 174 MKHSYVKQCDYVAIFDADFEPEPDFLWR 201 (526)
Q Consensus 174 l~~a~~~~~d~v~~lDaD~~~~pd~L~~ 201 (526)
++.. +.|+++..--..+++++.+..
T Consensus 77 l~~~---~~Dliv~agy~~Il~~~~l~~ 101 (211)
T 3p9x_A 77 LKEK---QIDFVVLAGYMRLVGPTLLGA 101 (211)
T ss_dssp HHHT---TCCEEEESSCCSCCCHHHHHH
T ss_pred HHhc---CCCEEEEeCchhhcCHHHHhh
Confidence 6665 899999998888889887755
No 80
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=23.07 E-value=2.2e+02 Score=25.93 Aligned_cols=17 Identities=24% Similarity=0.159 Sum_probs=14.4
Q ss_pred CCcEEEEecCCCCCChH
Q 009761 181 QCDYVAIFDADFEPEPD 197 (526)
Q Consensus 181 ~~d~v~~lDaD~~~~pd 197 (526)
++|-|+.+|+|.++-.+
T Consensus 95 ~~~~vlylD~D~~v~~~ 111 (263)
T 3u2u_A 95 QYSKCVFMDADTLVLAN 111 (263)
T ss_dssp TCSEEEEECTTEEECSC
T ss_pred CcceEEEEcCCEeeccC
Confidence 68999999999887554
No 81
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=22.83 E-value=88 Score=29.73 Aligned_cols=95 Identities=14% Similarity=0.197 Sum_probs=51.0
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCCccHHHHHhh
Q 009761 96 QIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYKAGALKEGMK 175 (526)
Q Consensus 96 iIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K~~aln~gl~ 175 (526)
++|..++...++.+++.+.+..-. +++.| |.+... .. .+++...+. ....++..+.+.| -+.++..+..
T Consensus 27 ll~l~g~~pli~~~l~~l~~~~~~-~~iiv-vt~~~~---~~-~i~~~l~~~----~~~~ii~e~~~~g-ta~ai~~a~~ 95 (336)
T 2x65_A 27 FLKLFGNKSLMRWTFERVLEEMDP-KDVIV-VTHKDY---VE-RTKKELPEL----PDENIIAEPMKKN-TAPACFIGTK 95 (336)
T ss_dssp GCCCBTTBCHHHHHHHHHHTTCCG-GGEEE-EEEGGG---HH-HHHHHCTTS----CGGGEEEESSCCC-HHHHHHHHHT
T ss_pred EEECCCCCcHHHHHHHHHhccCCC-CcEEE-EcChHH---HH-HHHHHhhcc----ccceEEeCCCCCC-cHHHHHHHHH
Confidence 467777678999999999875211 23333 444311 11 222221111 1112333444444 6777766665
Q ss_pred hhcccCCcEEEEecCCCCC-ChHHHHHHH
Q 009761 176 HSYVKQCDYVAIFDADFEP-EPDFLWRTI 203 (526)
Q Consensus 176 ~a~~~~~d~v~~lDaD~~~-~pd~L~~lv 203 (526)
.. ...+.++++.+|... +++.+.+++
T Consensus 96 ~~--~~~~~~lvl~~D~~~~~~~~~~~~l 122 (336)
T 2x65_A 96 LA--DDDEPVLVLPADHRIPDTKKFWKTV 122 (336)
T ss_dssp TS--CTTCEEEEEETTCBCCCHHHHHHHH
T ss_pred hh--CCCCEEEEEcCCceeccHHHHHHHH
Confidence 43 245789999999877 455444433
No 82
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=22.78 E-value=3.8e+02 Score=23.30 Aligned_cols=94 Identities=16% Similarity=0.137 Sum_probs=52.3
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCchhHHHHHHHHHHHhhccCCcEEEEeeCCCCCCC---ccHHH
Q 009761 95 VQIPMYNEKEVYQLSIGAACGLSWPSDRITIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDSRNGYK---AGALK 171 (526)
Q Consensus 95 ViIp~yne~~~l~~~L~sl~~q~yp~~~~~I~V~D~s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K---~~aln 171 (526)
|.|-..+..+....+++++.+...+ .++..+|.| .+|.... +.+++ .+..+.+....+-.. + ...+.
T Consensus 6 i~vl~sG~g~~~~~~l~~l~~~~l~-~~I~~Vit~-~~~~~v~----~~A~~---~gIp~~~~~~~~~~~-~~~~~~~~~ 75 (212)
T 3av3_A 6 LAVFASGSGTNFQAIVDAAKRGDLP-ARVALLVCD-RPGAKVI----ERAAR---ENVPAFVFSPKDYPS-KAAFESEIL 75 (212)
T ss_dssp EEEECCSSCHHHHHHHHHHHTTCCC-EEEEEEEES-STTCHHH----HHHHH---TTCCEEECCGGGSSS-HHHHHHHHH
T ss_pred EEEEEECCcHHHHHHHHHHHhCCCC-CeEEEEEeC-CCCcHHH----HHHHH---cCCCEEEeCcccccc-hhhhHHHHH
Confidence 4555667778899999998876443 234443444 3333222 22222 255554432211111 1 11344
Q ss_pred HHhhhhcccCCcEEEEecCCCCCChHHHHH
Q 009761 172 EGMKHSYVKQCDYVAIFDADFEPEPDFLWR 201 (526)
Q Consensus 172 ~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~ 201 (526)
..++.. +.|+++..-=..+++++++..
T Consensus 76 ~~l~~~---~~Dliv~a~y~~il~~~~l~~ 102 (212)
T 3av3_A 76 RELKGR---QIDWIALAGYMRLIGPTLLSA 102 (212)
T ss_dssp HHHHHT---TCCEEEESSCCSCCCHHHHHH
T ss_pred HHHHhc---CCCEEEEchhhhhCCHHHHhh
Confidence 455555 889999888788888887744
No 83
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=20.69 E-value=1.6e+02 Score=26.10 Aligned_cols=40 Identities=18% Similarity=-0.002 Sum_probs=27.1
Q ss_pred CCccHHHHHhhhhcccCCcEEEEecCCCCCChHHHHHHHhhhh
Q 009761 165 YKAGALKEGMKHSYVKQCDYVAIFDADFEPEPDFLWRTIPFLV 207 (526)
Q Consensus 165 ~K~~aln~gl~~a~~~~~d~v~~lDaD~~~~pd~L~~lv~~~~ 207 (526)
|-++++..+.+... ..|.++++.+|.+.+ ..+.+++....
T Consensus 107 gt~~al~~a~~~~~--~~~~~lv~~~D~~~~-~~~~~~~~~~~ 146 (259)
T 1tzf_A 107 MTGGRLKRVAEYVK--DDEAFLFTYGDGVAD-LDIKATIDFHK 146 (259)
T ss_dssp CHHHHHHHTGGGTT--TSSCEEEEETTEEEC-CCHHHHHHHHH
T ss_pred CcHHHHHHHHHhcC--CCCcEEEEECCEecc-cCHHHHHHHHH
Confidence 46777777776651 357788889998654 45677776653
Done!