Your job contains 1 sequence.
>009763
MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVK
PRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAE
LTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIAT
GGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNY
DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGY
TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD
GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIK
TFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSES
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009763
(526 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051094 - symbol:MAC3B "MOS4-associated compl... 2092 1.5e-216 1
UNIPROTKB|Q9AV81 - symbol:PUB72 "U-box domain-containing ... 2089 3.2e-216 1
TAIR|locus:2018319 - symbol:MAC3A "AT1G04510" species:370... 2076 7.6e-215 1
UNIPROTKB|Q9UMS4 - symbol:PRPF19 "Pre-mRNA-processing fac... 1071 2.4e-108 1
UNIPROTKB|B2CCY7 - symbol:PRPF19 "Nuclear matrix protein ... 1068 4.9e-108 1
UNIPROTKB|Q08E38 - symbol:PRPF19 "Pre-mRNA-processing fac... 1067 6.3e-108 1
UNIPROTKB|E2R8L3 - symbol:PRPF19 "Uncharacterized protein... 1066 8.1e-108 1
MGI|MGI:106247 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA proce... 1064 1.3e-107 1
RGD|708496 - symbol:Prpf19 "PRP19/PSO4 pre-mRNA processin... 1064 1.3e-107 1
UNIPROTKB|Q9JMJ4 - symbol:Prpf19 "Pre-mRNA-processing fac... 1064 1.3e-107 1
FB|FBgn0261119 - symbol:Prp19 "Prp19" species:7227 "Droso... 1063 1.7e-107 1
ZFIN|ZDB-GENE-030131-263 - symbol:prp19 "PRP19/PSO4 homol... 1061 2.7e-107 1
UNIPROTKB|Q5ZMA2 - symbol:PRPF19 "Pre-mRNA-processing fac... 1027 1.1e-103 1
DICTYBASE|DDB_G0276803 - symbol:prp19 "pre-mRNA processin... 786 3.8e-78 1
ASPGD|ASPL0000003842 - symbol:AN6906 species:162425 "Emer... 399 1.1e-62 2
WB|WBGene00020423 - symbol:prp-19 species:6239 "Caenorhab... 637 2.3e-62 1
GENEDB_PFALCIPARUM|PFC0365w - symbol:PFC0365w "conserved ... 521 4.6e-50 1
UNIPROTKB|O77325 - symbol:PFC0365w "PRP19-like protein, p... 521 4.6e-50 1
UNIPROTKB|F5GY56 - symbol:PRPF19 "Pre-mRNA-processing fac... 481 2.0e-49 2
POMBASE|SPAC29A4.08c - symbol:prp19 "ubiquitin-protein li... 369 1.6e-47 2
UNIPROTKB|H9L227 - symbol:PRPF19 "Pre-mRNA-processing fac... 417 4.8e-39 1
CGD|CAL0004852 - symbol:orf19.6740 species:5476 "Candida ... 296 1.5e-28 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 302 1.3e-25 1
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 314 1.5e-25 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 297 1.1e-24 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 282 4.1e-24 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 282 4.1e-24 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 282 4.1e-24 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 282 4.1e-24 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 282 4.1e-24 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 282 4.1e-24 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 281 5.4e-24 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 280 6.9e-24 1
SGD|S000003959 - symbol:PRP19 "Splicing factor associated... 244 9.3e-24 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 273 4.0e-23 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 282 1.3e-22 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 266 2.4e-22 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 264 3.9e-22 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 275 8.3e-22 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 278 1.5e-21 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 257 2.3e-21 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 270 3.5e-21 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 269 4.7e-21 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 261 5.9e-21 1
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 250 1.3e-20 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 265 1.4e-20 1
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 266 2.4e-20 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 272 5.2e-20 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 263 6.1e-20 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 265 1.0e-19 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 261 1.0e-19 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 224 1.1e-19 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 258 1.2e-19 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 254 1.2e-19 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 239 2.1e-19 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 268 2.2e-19 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 257 2.9e-19 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 255 4.0e-19 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 258 4.1e-19 1
WB|WBGene00007972 - symbol:prp-4 species:6239 "Caenorhabd... 256 4.3e-19 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 255 5.0e-19 1
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 256 5.1e-19 1
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 256 5.1e-19 1
FB|FBgn0036733 - symbol:U4-U6-60K "U4-U6 small nuclear ri... 254 1.0e-18 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 246 1.2e-18 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 251 1.4e-18 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 252 1.4e-18 1
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 250 2.6e-18 1
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 250 2.7e-18 1
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 249 3.1e-18 1
UNIPROTKB|Q8N0X2 - symbol:SPAG16 "Sperm-associated antige... 249 4.1e-18 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 249 4.1e-18 1
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 247 5.3e-18 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 249 5.5e-18 1
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 249 6.9e-18 2
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 248 7.0e-18 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 248 7.0e-18 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 248 7.0e-18 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 248 7.0e-18 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 247 9.3e-18 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 236 2.5e-17 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 236 2.5e-17 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 219 3.1e-17 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 242 3.3e-17 1
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 241 3.5e-17 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 236 4.3e-17 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 217 5.2e-17 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 229 5.7e-17 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 225 8.4e-17 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 234 8.7e-17 1
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 236 1.5e-16 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 228 3.3e-16 1
DICTYBASE|DDB_G0287635 - symbol:prpf4 "pre-mRNA processin... 216 4.1e-16 3
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 232 4.2e-16 1
SGD|S000000653 - symbol:PWP2 "Conserved 90S pre-ribosomal... 207 4.4e-16 2
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 230 5.7e-16 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 228 5.9e-16 1
UNIPROTKB|B3KVK2 - symbol:GNB1 "cDNA FLJ16663 fis, clone ... 205 1.0e-15 1
UNIPROTKB|F5H2I0 - symbol:PRPF19 "Pre-mRNA-processing fac... 205 1.0e-15 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 215 1.1e-15 1
WARNING: Descriptions of 1184 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2051094 [details] [associations]
symbol:MAC3B "MOS4-associated complex 3B" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0042742 GO:GO:0006281 eggNOG:COG2319 GO:GO:0006397
GO:GO:0045087 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AC002332 GO:GO:0080008 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:FJ820118 EMBL:AY080868 IPI:IPI00529157
PIR:C84744 RefSeq:NP_850206.4 RefSeq:NP_850207.4 UniGene:At.44022
ProteinModelPortal:O22785 SMR:O22785 IntAct:O22785 STRING:O22785
PaxDb:O22785 PRIDE:O22785 EnsemblPlants:AT2G33340.1
EnsemblPlants:AT2G33340.2 GeneID:817897 KEGG:ath:AT2G33340
GeneFarm:2867 TAIR:At2g33340 InParanoid:O22785 OMA:QWQELKV
PhylomeDB:O22785 Genevestigator:O22785 Uniprot:O22785
Length = 525
Score = 2092 (741.5 bits), Expect = 1.5e-216, P = 1.5e-216
Identities = 403/521 (77%), Positives = 454/521 (87%)
Query: 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVK 60
MNC+ISGEVP EPVVS SGLLFE+RLIERHI DYGKCPVTGEPLT+DDIVPIKTG+I+K
Sbjct: 1 MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIK 60
Query: 61 PRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
P+ L ASIPG+LG FQNEWDGLMLSNFALEQQLHTARQELSHALYQHD+ACRVIARLKK
Sbjct: 61 PKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKK 120
Query: 121 ERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAE 180
ERDEAR LLA+ ER I PA AVT+NAALSNGKRA DE+LGP KKL GI+ II E
Sbjct: 121 ERDEARQLLAEVERHI-PAAPEAVTANAALSNGKRAAVDEELGPDAKKLCPGISAEIITE 179
Query: 181 LTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIAT 240
LTDCNAALSQ+RKKRQ+P LA ID LER+TQL+SHPLHKT+KPGI S+DI +SKDVIAT
Sbjct: 180 LTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIAT 239
Query: 241 GGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNY 300
GGVD AVLFDRPSGQI++TL+GHSKKVTSVKFV + DL LT SADKTVR+W+ DGNY
Sbjct: 240 GGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNY 299
Query: 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGY 360
C +TL DH+AEV+AVTVH TNKYFV+ASLD TWCFYDLSSG CL QVSD D + Y
Sbjct: 300 ACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSD---DSKNVDY 356
Query: 361 TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD 420
T+AAFHPDGLILGTGTS+++VKIWDVKSQANVAKFDGH G VTAISFSENGY+LATAA D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 421 GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIK 480
GV+LWDLRKL+NF+SF S+D+ NSV+FD SGSYL +A++DI+VYQ ASVKA+WN IK
Sbjct: 417 GVRLWDLRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIK 472
Query: 481 TFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGND 521
T PDLSGTGKATCVKFG DA+Y+AVGSMDRNLR+FGLPG++
Sbjct: 473 TLPDLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDE 513
>UNIPROTKB|Q9AV81 [details] [associations]
symbol:PUB72 "U-box domain-containing protein 72"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618 GO:GO:0009507
GO:GO:0046686 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0042742 eggNOG:COG2319 EMBL:DP000086
EMBL:AP008216 EMBL:CM000147 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:AC022457 EMBL:AK064778
RefSeq:NP_001064804.1 UniGene:Os.37656 ProteinModelPortal:Q9AV81
STRING:Q9AV81 PRIDE:Q9AV81 GeneID:4348844 KEGG:dosa:Os10t0466300-01
KEGG:osa:4348844 Gramene:Q9AV81 Uniprot:Q9AV81
Length = 527
Score = 2089 (740.4 bits), Expect = 3.2e-216, P = 3.2e-216
Identities = 396/521 (76%), Positives = 454/521 (87%)
Query: 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVK 60
M C+ISGEVP+EPVVSK SGLLFE+RL+ER+I D+GKCPVT E LTMDDIV +KT K+VK
Sbjct: 1 MICAISGEVPDEPVVSKKSGLLFERRLVERYIEDHGKCPVTKEELTMDDIVAVKTNKVVK 60
Query: 61 PRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
PR L AASIPG+LGMFQNEWD +MLS+FALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61 PRQLQAASIPGLLGMFQNEWDAIMLSSFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
Query: 121 ERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAE 180
ERDEAR+LLAQ+ERQI PA A +SNGKRA EDE +GP GKK+ GI P +I E
Sbjct: 121 ERDEARALLAQAERQI-PASMAGAAPTAVVSNGKRAFEDE-VGPDGKKIRPGINPVMIDE 178
Query: 181 LTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIAT 240
LT+CN LS RKKRQVPP LA IDA+ERYTQ++SHPLHKT+KPGI+S+DIH SKD+IAT
Sbjct: 179 LTECNTMLSAHRKKRQVPPTLASIDAIERYTQISSHPLHKTNKPGILSMDIHPSKDIIAT 238
Query: 241 GGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNY 300
GG+DTNAVLFDRPSGQI+ TL+GHSKK+TS+KFV +LF+TGSADKTV++WQGSE+GNY
Sbjct: 239 GGIDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGSEEGNY 298
Query: 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGY 360
+C HTLKDHTAEV+AVTVHAT KYFVTAS DNTWCFYD+ SG CLTQV ++ G+ EGY
Sbjct: 299 NCIHTLKDHTAEVEAVTVHATQKYFVTASKDNTWCFYDIPSGSCLTQVGESS--GQ-EGY 355
Query: 361 TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD 420
TSA+FHPDGLILGTGT+EA+VKIWDVK+Q+NVAKF+GHVG VTA+SFSENGY+LATAA D
Sbjct: 356 TSASFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALD 415
Query: 421 GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIK 480
GVKLWDLRKL+NFR+ DS+TPTNSV+FD SGSYLAV +D RVYQVA+VK +WN +K
Sbjct: 416 GVKLWDLRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQVANVKLEWNLVK 475
Query: 481 TFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGND 521
T PDLSGTGK T VKFG DAKYIAVGSMDRNLR+FG PG D
Sbjct: 476 TLPDLSGTGKVTNVKFGTDAKYIAVGSMDRNLRIFGHPGED 516
>TAIR|locus:2018319 [details] [associations]
symbol:MAC3A "AT1G04510" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0005730
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0042742 eggNOG:COG2319 GO:GO:0006397 GO:GO:0045087
GO:GO:0005681 EMBL:AC000104 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 EMBL:AY039940 EMBL:AY142564 EMBL:AK221436
IPI:IPI00529251 PIR:E86177 RefSeq:NP_563708.1 UniGene:At.21449
HSSP:P32523 ProteinModelPortal:Q94BR4 SMR:Q94BR4 IntAct:Q94BR4
STRING:Q94BR4 PaxDb:Q94BR4 PRIDE:Q94BR4 DNASU:839503
EnsemblPlants:AT1G04510.1 GeneID:839503 KEGG:ath:AT1G04510
GeneFarm:3007 TAIR:At1g04510 HOGENOM:HOG000177308 InParanoid:Q94BR4
OMA:FPDANSV PhylomeDB:Q94BR4 ProtClustDB:CLSN2687671
Genevestigator:Q94BR4 Uniprot:Q94BR4
Length = 523
Score = 2076 (735.8 bits), Expect = 7.6e-215, P = 7.6e-215
Identities = 396/526 (75%), Positives = 457/526 (86%)
Query: 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVK 60
MNC+ISGEVPEEPVVSK SGLL+EKRLI+ HI DYGKCPVTGEP T+DDIVPIKTGKIVK
Sbjct: 1 MNCAISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVK 60
Query: 61 PRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
P+PL ASIPG+LG FQ EWD LMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61 PKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
Query: 121 ERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAE 180
ERDE+R LLA++ERQ+ PA TSNAALSNGKR +D + GP KK+ GI+ +I E
Sbjct: 121 ERDESRQLLAEAERQL-PAAPEVATSNAALSNGKRGIDDGEQGPNAKKMRLGISAEVITE 179
Query: 181 LTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIAT 240
LTDCNAALSQQRKKRQ+P LA +DALE++TQL+SHPLHKT+KPGI S+DI +SKDVIAT
Sbjct: 180 LTDCNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIAT 239
Query: 241 GGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNY 300
GG+DT AVLFDRPSGQI++TL+GHSKKVTS+KFV + DL LT S+DKTVR+W SEDGNY
Sbjct: 240 GGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNY 299
Query: 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGY 360
+HTLKDH+AEV+AVTVHATNKYFV+ASLD+TWCFYDLSSG+CL QV+DA + Y
Sbjct: 300 TSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASEND--VNY 357
Query: 361 TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD 420
T+AAFHPDGLILGTGT++++VKIWDVKSQANVAKF GH G +T+ISFSENGY+LATAA D
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Query: 421 GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIK 480
GV+LWDLRKLKNFR+F+ D+ NSV+FDHSGSYL +A++DIRV+Q ASVKA+WN IK
Sbjct: 418 GVRLWDLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIK 473
Query: 481 TFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSES 526
T PDLSGTGKAT VKFG D+KYIAVGSMDRNLR+FGLP +D +S
Sbjct: 474 TLPDLSGTGKATSVKFGLDSKYIAVGSMDRNLRIFGLPDDDNTEDS 519
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 241/520 (46%), Positives = 318/520 (61%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+
Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 65 PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
AR LA + Q AV S+ G A E DLG G+TP II +L
Sbjct: 125 TAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQ 177
Query: 183 DCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSK-DVI 238
D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I
Sbjct: 178 DKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKI 237
Query: 239 ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298
TGG D N V+FD+ S QI+ TL GH+KKVTSV F DL + S D T+R+W
Sbjct: 238 LTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVP--- 294
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE 358
N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G
Sbjct: 295 NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC-- 351
Query: 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418
T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA
Sbjct: 352 SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAA 411
Query: 419 HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWN 477
D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W
Sbjct: 412 DDSSVKLWDLRKLKNFKTLQL-DNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWT 466
Query: 478 CIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
I F + SG T V FG AK+IA MDR+L+ + L
Sbjct: 467 EILHFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 504
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 1068 (381.0 bits), Expect = 4.9e-108, P = 4.9e-108
Identities = 240/520 (46%), Positives = 318/520 (61%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+
Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 65 PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
AR LA + Q AV S+ G A E DLG G+TP II +L
Sbjct: 125 TAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQ 177
Query: 183 DCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSK-DVI 238
D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I
Sbjct: 178 DKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKI 237
Query: 239 ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298
TGG D N V+FD+ S QI+ TL GH+KKVTSV F +L + S D T+R+W
Sbjct: 238 LTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVP--- 294
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE 358
N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G
Sbjct: 295 NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC-- 351
Query: 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418
T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA
Sbjct: 352 SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAA 411
Query: 419 HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWN 477
D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W
Sbjct: 412 DDSSVKLWDLRKLKNFKTLQL-DNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWT 466
Query: 478 CIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
I F + SG T V FG AK+IA MDR+L+ + L
Sbjct: 467 EILHFTEHSGV--TTGVAFGHHAKFIASTGMDRSLKFYSL 504
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 240/520 (46%), Positives = 318/520 (61%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+
Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 65 PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
AR LA + Q AV S+ G A E DLG G+TP II +L
Sbjct: 125 TAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQ 177
Query: 183 DCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSK-DVI 238
D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I
Sbjct: 178 DKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKI 237
Query: 239 ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298
TGG D N V+FD+ S QI+ TL GH+KKVTSV F +L + S D T+R+W
Sbjct: 238 LTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVP--- 294
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE 358
N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G
Sbjct: 295 NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC-- 351
Query: 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418
T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA
Sbjct: 352 SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAA 411
Query: 419 HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWN 477
D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W
Sbjct: 412 DDSSVKLWDLRKLKNFKTLQL-DNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWT 466
Query: 478 CIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
I F + SG T V FG AK+IA MDR+L+ + L
Sbjct: 467 EILHFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 504
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 239/520 (45%), Positives = 317/520 (60%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+
Sbjct: 14 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 73
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 74 PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 133
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
AR LA + Q AV S+ G A E DLG G+TP II +L
Sbjct: 134 TAAREALATLKPQAGLIVPQAVPSSQPSVAG--AGEPMDLGEL-----VGMTPEIIQKLQ 186
Query: 183 DCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDI-HYSKDVI 238
D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ + I
Sbjct: 187 DKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPADTNKI 246
Query: 239 ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298
TGG D N V+FD+ S QI+ TL GH+KKVTSV F +L + S D T+R+W
Sbjct: 247 LTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVP--- 303
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE 358
N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G
Sbjct: 304 NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC-- 360
Query: 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418
T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA
Sbjct: 361 SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAA 420
Query: 419 HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWN 477
D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W
Sbjct: 421 DDSSVKLWDLRKLKNFKTLQL-DNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWT 475
Query: 478 CIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
I F + SG T V FG AK+IA MDR+L+ + L
Sbjct: 476 EILHFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 513
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 239/520 (45%), Positives = 318/520 (61%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+
Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 65 PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
AR LA + Q AV S+ G A E DLG G+TP II +L
Sbjct: 125 TAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQ 177
Query: 183 DCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSK-DVI 238
D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I
Sbjct: 178 DKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKI 237
Query: 239 ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298
TGG D N V+FD+ + QI+ TL GH+KKVTSV F +L + S D T+R+W
Sbjct: 238 LTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVP--- 294
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE 358
N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G
Sbjct: 295 NTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC-- 351
Query: 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418
T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA
Sbjct: 352 SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAA 411
Query: 419 HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWN 477
D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W
Sbjct: 412 DDSSVKLWDLRKLKNFKTLQL-DNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWT 466
Query: 478 CIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
I F + SG T V FG AK+IA MDR+L+ + L
Sbjct: 467 EILHFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 504
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 239/520 (45%), Positives = 318/520 (61%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+
Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 65 PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
AR LA + Q AV S+ G A E DLG G+TP II +L
Sbjct: 125 TAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQ 177
Query: 183 DCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSK-DVI 238
D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I
Sbjct: 178 DKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKI 237
Query: 239 ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298
TGG D N V+FD+ + QI+ TL GH+KKVTSV F +L + S D T+R+W
Sbjct: 238 LTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVP--- 294
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE 358
N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G
Sbjct: 295 NTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC-- 351
Query: 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418
T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA
Sbjct: 352 SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAA 411
Query: 419 HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWN 477
D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W
Sbjct: 412 DDSSVKLWDLRKLKNFKTLQL-DNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWT 466
Query: 478 CIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
I F + SG T V FG AK+IA MDR+L+ + L
Sbjct: 467 EILHFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 504
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 239/520 (45%), Positives = 318/520 (61%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+
Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 65 PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
AR LA + Q AV S+ G A E DLG G+TP II +L
Sbjct: 125 TAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQ 177
Query: 183 DCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSK-DVI 238
D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I
Sbjct: 178 DKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKI 237
Query: 239 ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298
TGG D N V+FD+ + QI+ TL GH+KKVTSV F +L + S D T+R+W
Sbjct: 238 LTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVP--- 294
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE 358
N C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G
Sbjct: 295 NTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDE-TSGC-- 351
Query: 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418
T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATAA
Sbjct: 352 SLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAA 411
Query: 419 HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWN 477
D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W
Sbjct: 412 DDSSVKLWDLRKLKNFKTLQL-DNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWT 466
Query: 478 CIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
I F + SG T V FG AK+IA MDR+L+ + L
Sbjct: 467 EILHFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 504
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 233/521 (44%), Positives = 320/521 (61%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
C+++ EVPE PVVS +SG +FEKR+IE+++L+ G P++G+ L ++++ IKT +VKP+
Sbjct: 5 CALTNEVPETPVVSPHSGAVFEKRVIEKYLLENGCDPISGKELKPEELIEIKTPAVVKPK 64
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P +A SIP L Q+EWD LM+ +F QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 65 PPSATSIPATLKTMQDEWDALMIHSFTQRQQLQTTRQELSHALYQHDAACRVIARLNKEV 124
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLH-TGITPAIIAEL 181
AR LA + Q A + AL++ E G A + G++ +I +L
Sbjct: 125 AAAREALATLKPQAGIANAPTAIPQPALAS-------EAGGAAAHPMEQAGMSAEVIQKL 177
Query: 182 TDCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSK-DV 237
D L+Q+RKKR VP L D ++ + +ASHP LH S PGI++LDI+ +
Sbjct: 178 QDKATVLTQERKKRGRTVPEDLVTTDQVKNFLTVASHPGLHSASVPGILALDINSADHSK 237
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I TGG D NA +F++ + Q+V L GH+KK+T V + D +TGS D +R+W
Sbjct: 238 ILTGGNDKNATVFNKDTEQMVAILKGHTKKITKVIYHPNEDTVITGSPDMNIRIWHVPTS 297
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
+ L+ H V +++H T Y ++ S D W F D+ +G LT+V D
Sbjct: 298 ---QTQLLLRCHEGPVTGLSLHPTGDYLLSTSSDKHWAFSDIRTGRLLTKVIDTAE---- 350
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G T+A FHPDGLI GTGT ++ VKIWD+K Q+NVA F GH G ++AISFSENGYYLATA
Sbjct: 351 VGLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATA 410
Query: 418 AHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADW 476
A D VKLWDLRKLKNF++ + D + FD SG+YLA+A +D+RVY + W
Sbjct: 411 ADDACVKLWDLRKLKNFKTIQLDDGYE-VKDLCFDQSGTYLAIAGSDVRVY----LCKQW 465
Query: 477 NCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+K F D T AT V+FG A+Y+A SMDR L+++ +
Sbjct: 466 QELKVFND--HTALATGVRFGKHAQYLASTSMDRTLKLYAI 504
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 236/522 (45%), Positives = 320/522 (61%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
C+IS EVPE P VS S +FE+RLIE++I + G P+ G+PL+ + ++ IK ++P+
Sbjct: 5 CAISNEVPEHPCVSPVSNQVFERRLIEKYIAENGADPINGQPLSEEQLIDIKVSHPIRPK 64
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
+A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 65 APSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124
Query: 123 DEARSLLAQSERQ--IMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAE 180
AR LA + Q ++ ++ + AA+ G A E + G+TP II +
Sbjct: 125 TAAREALATLKPQAGLVAPQAAPASQPAAVGAGGEAMEVSE--------QVGMTPEIIQK 176
Query: 181 LTDCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDI-HYSKD 236
L D L+ +RKKR VP L + L +Y Q+ SH LH S PGI+SLD+ +
Sbjct: 177 LQDKATVLTTERKKRGKTVPEELVRAEDLSKYRQVGSHAGLHSASVPGILSLDLCPTDTN 236
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
+ TGG D N V+FDR QIV TL GH+KKV+SV + + + S+D T+RVW +
Sbjct: 237 KVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVT- 295
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
GN C ++ H + V +++HAT Y +++S D W F D+ +G LT+V+D T G
Sbjct: 296 GGN--CVQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDE-TAGC 352
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G VTAI+FSENGYYLAT
Sbjct: 353 --ALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLAT 410
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKAD 475
A D +KLWDLRKLKNF++ + D+ S+ FD SG+YLAV +DIRVY +
Sbjct: 411 GAQDSSLKLWDLRKLKNFKTI-TLDNNYEVKSLVFDQSGTYLAVGGSDIRVY----ICKQ 465
Query: 476 WNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
W+ + F D SG T V FG A+++A MDR+L+ + L
Sbjct: 466 WSEVLNFSDHSGL--VTGVAFGEHAQFLASTGMDRSLKFYSL 505
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 234/521 (44%), Positives = 309/521 (59%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
CSIS EVPE P VS S ++E+RLIE++I + G PV +PL+ + ++ IK ++PR
Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHPIRPR 64
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 65 PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
AR LA + Q AV S+ N A E DLG G+TP II +
Sbjct: 125 TAAREALATLKPQAGLIVPQAVPSSQP--NVAGAGESMDLGELA-----GMTPEIIQKPQ 177
Query: 183 DCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP--LHKTSKPGIVSLDIHYSK-DV 237
D L+ +RKKR VP L ++ + LH S PGI++LD+ S +
Sbjct: 178 DKATVLTTERKKRGKTVPEELVEARGAQQVPGRSPRMWGLHSASIPGILALDLCPSDTNK 237
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I TGG D N ++FD+ S QI+ TL GHSKKVTSV F DL + S D T+R+W
Sbjct: 238 ILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVP-- 295
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
N C ++ H V +++HAT Y +++S D W F D+ +G LT+V+D +
Sbjct: 296 -NASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGC-- 352
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGYYLATA
Sbjct: 353 -ALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 411
Query: 418 AHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADW 476
A D VKLWDLRKLKNF++ + D+ S+ FD SG+YLA+ D+++Y + W
Sbjct: 412 ADDSSVKLWDLRKLKNFKTLQL-DNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQW 466
Query: 477 NCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
I F + SG T V FG AK+IA MDR+L+ + L
Sbjct: 467 TEILHFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 505
>DICTYBASE|DDB_G0276803 [details] [associations]
symbol:prp19 "pre-mRNA processing factor 19"
species:44689 "Dictyostelium discoideum" [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISS] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 dictyBase:DDB_G0276803 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0006281 eggNOG:COG2319 GenomeReviews:CM000151_GR
GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
EMBL:AAFI02000019 GO:GO:0000398 GO:GO:0000151 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 OMA:QWQELKV
RefSeq:XP_642890.1 ProteinModelPortal:Q7KWK5 STRING:Q7KWK5
PRIDE:Q7KWK5 EnsemblProtists:DDB0233121 GeneID:8620756
KEGG:ddi:DDB_G0276803 Uniprot:Q7KWK5
Length = 514
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 200/529 (37%), Positives = 293/529 (55%)
Query: 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVK 60
M C+ISG EEPV+S +G ++EKRLIE++I GK P TGEPL + D++ +K GK VK
Sbjct: 1 MICAISGSTTEEPVISTKTGNVYEKRLIEKYIDTNGKEPTTGEPLGLSDLITVKIGKTVK 60
Query: 61 PRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
PRP TA SIP ML +FQNEWD LML F L+QQ T RQEL+H++YQ+DAACRVIARL K
Sbjct: 61 PRPTTATSIPSMLQLFQNEWDSLMLETFTLKQQHETVRQELAHSMYQYDAACRVIARLVK 120
Query: 121 ERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAE 180
ERD ARS LA + R I+ + +N +N K P+ + + + I
Sbjct: 121 ERDAARSALANA-RNIVQQQQQQTNNNNNNNNNKDVEMSSASTPSSSEDNL-LDSTIYKR 178
Query: 181 LTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKD--VI 238
+ + + L + RK+R +LA DA++++ A+ +T I SL+++ S+D +I
Sbjct: 179 IAEKSEELIKTRKER-THQSLAEPDAIKQFKVSANV---ETDCQ-IKSLEVN-SQDNNLI 232
Query: 239 ATGGVDTNAVLFDRPSGQIVTTLSGHSKK-VTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
A GG++ N ++ R + ++ T + G S + V F + GS D +RV +G E
Sbjct: 233 AMGGINGNVYVYSRETNELCTAIKGTSSAPINKVLFAPNNTIVSAGS-DAVIRVVKGGES 291
Query: 298 GN---Y-DCKHTLK-DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAG 352
+ Y K T + H A V +++H Y +++SLD + YD+ +G LT +
Sbjct: 292 PSKKTYTQYKSTYQFAHKASVTDISLHVLGDYIISSSLDKSLNMYDIVNGTHLTSFGQS- 350
Query: 353 TDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGY 412
+ YTS AFHPDG+ GT +VKI+D+KS+ N F G AV ISFSENGY
Sbjct: 351 ---QQLCYTSVAFHPDGMFFAAGTQNGVVKIFDLKSKVNSFNFQGLSTAVNCISFSENGY 407
Query: 413 YLATAAHDGVKLWDLRKL--KNFRSFESSDSETPT-NSVDFDHSGSYLAVASAD-IRVYQ 468
YL A ++ VKL+DLRK KN ++ + S++FD+S YL VAS++ I +Y
Sbjct: 408 YLTAADNNTVKLFDLRKAATKNSPDIQTITLDNQQIKSINFDYSSQYLGVASSNQINLYS 467
Query: 469 VASVKADWNCIKTFPDLSGTGK--ATCVKFG---PDAKYIAVGSMDRNL 512
S K P +S + C+ F P++ + S +N+
Sbjct: 468 CKS--------KQKPPISSIHSIDSDCLDFKWARPNSNFFVTSSSSKNI 508
>ASPGD|ASPL0000003842 [details] [associations]
symbol:AN6906 species:162425 "Emericella nidulans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR006692
InterPro:IPR015943 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
EMBL:BN001301 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 EMBL:AACD01000113 eggNOG:NOG319177 KO:K10599
OrthoDB:EOG4M0JB3 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV RefSeq:XP_664510.1
ProteinModelPortal:Q5AXS4 SMR:Q5AXS4 STRING:Q5AXS4
EnsemblFungi:CADANIAT00007708 GeneID:2870617 KEGG:ani:AN6906.2
Uniprot:Q5AXS4
Length = 475
Score = 399 (145.5 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 81/159 (50%), Positives = 107/159 (67%)
Query: 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVK 60
M C+ISGE P+EPVVS SG +FEKRL+E +I + GK PV GE L+ +D++ +KT ++V+
Sbjct: 1 MLCAISGEAPQEPVVSPKSGSVFEKRLVEAYIAENGKDPVNGEELSTEDLIEVKTQRVVR 60
Query: 61 PRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
PRP T SIP +L +FQ EWD L L + L Q L RQELS ALYQHDAA RVIARL K
Sbjct: 61 PRPPTLTSIPSLLSVFQEEWDALALETYTLRQTLAQTRQELSAALYQHDAAVRVIARLTK 120
Query: 121 ERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPED 159
ERDEAR L+ + + A S+ ++A + P++
Sbjct: 121 ERDEARDALS---KVTVGARSSGAAADAMQVDSAGLPDE 156
Score = 259 (96.2 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 84/298 (28%), Positives = 139/298 (46%)
Query: 224 PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLS--GHSKKVTSVKFVTEGDLFL 281
PG SL ++ S D++ + +F QI+ TL GH VT+V + G+ +
Sbjct: 201 PGGKSLSVNVSGDLVLVETAEGTVGVFSLSQKQIIHTLQTDGH---VTNVLWA--GEKAV 255
Query: 282 TGSADKTVRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
S+ +V+V++ G E N++ H + +HAT + D ++ YDL+
Sbjct: 256 VASSTGSVKVFESGKEIANFN------SHAGAATGLALHATGDIVASVGEDKSYVLYDLT 309
Query: 341 S-GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV 399
+ G+ L S+ S FHPDG +L G ++ +KI+D+K+ A A +D
Sbjct: 310 TNGVILQNFSNTSL-------LSVQFHPDGHLLAAGGADGQIKIYDIKTGALAATYD-LA 361
Query: 400 GAVTAISFSENGYYLATAAHDG--VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457
GAV + FSENG YLA + V +WDLR K + E+ +S+ +D++G +L
Sbjct: 362 GAVKRVFFSENGTYLAAVTENSTMVSIWDLRSSKEIKVLETGSQ---VDSIHWDYTGQFL 418
Query: 458 AVAS-ADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRV 514
+ + V Q + W T P L A V +G A+ I ++D + R+
Sbjct: 419 LTGGPSGLTVQQYSKASKVW----TEP-LRSAVPAVAVAWGSAAQSIM--ALDNDGRI 469
Score = 171 (65.3 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 71/277 (25%), Positives = 122/277 (44%)
Query: 172 GITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSK--PGIVSL 229
G+ ++A + + A+LS+ R+KR VP A +A+ Y P T PG SL
Sbjct: 152 GLPDEVLARVENTQASLSKTRRKRPVPEGWATGEAISAYK-----PTESTDAFYPGGKSL 206
Query: 230 DIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLS--GHSKKVTSVKFVTEGDLFLTGSADK 287
++ S D++ + +F QI+ TL GH VT+V + G+ + S+
Sbjct: 207 SVNVSGDLVLVETAEGTVGVFSLSQKQIIHTLQTDGH---VTNVLWA--GEKAVVASSTG 261
Query: 288 TVRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS-GICL 345
+V+V++ G E N++ H + +HAT + D ++ YDL++ G+ L
Sbjct: 262 SVKVFESGKEIANFN------SHAGAATGLALHATGDIVASVGEDKSYVLYDLTTNGVIL 315
Query: 346 TQVSDAG---TDGRPEGYTSAAFHPDGLI-LGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
S+ P+G+ AA DG I + + AL +D+ F +
Sbjct: 316 QNFSNTSLLSVQFHPDGHLLAAGGADGQIKIYDIKTGALAATYDLAGAVKRVFFSENGTY 375
Query: 402 VTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFES 438
+ A++ EN +T V +WDLR K + E+
Sbjct: 376 LAAVT--EN----STM----VSIWDLRSSKEIKVLET 402
Score = 64 (27.6 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 34/168 (20%), Positives = 74/168 (44%)
Query: 353 TDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDV--KSQANVAKFDGHVGAVTAISFSEN 410
TD G S + + G ++ T+E V ++ + K + + DGHV T + ++
Sbjct: 196 TDAFYPGGKSLSVNVSGDLVLVETAEGTVGVFSLSQKQIIHTLQTDGHV---TNVLWAGE 252
Query: 411 GYYLATAAHDGVKLWDLRK-LKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQV 469
+A++ VK+++ K + NF S + + ++ +G +A D + Y +
Sbjct: 253 KAVVASST-GSVKVFESGKEIANFNSHAGAATGLALHA-----TGDIVASVGED-KSYVL 305
Query: 470 ASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+ + ++ F + S V+F PD +A G D ++++ +
Sbjct: 306 YDLTTNGVILQNFSNTS----LLSVQFHPDGHLLAAGGADGQIKIYDI 349
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 146/399 (36%), Positives = 228/399 (57%)
Query: 121 ERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAE 180
+ D A ++++ +++ A T S A D+D+ + G++ AI+A+
Sbjct: 110 QHDAACRVISRLSKELTAAREALSTLKPHTS----AKVDDDVSIDESEDQQGLSEAILAK 165
Query: 181 LTDCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSKDV 237
L + + +L+ +RK+R +P LA + L Q ASH +H T PGI +LDI ++
Sbjct: 166 LEEKSKSLTAERKQRGKNLPEGLAKTEELAELKQTASHTGIHSTGTPGITALDI--KGNL 223
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
TGG+D VL+D Q++ T GH+KK+ +V + ++ SAD +RVW ++
Sbjct: 224 SLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDS 283
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
+ K + H A V ++++A+ Y ++AS D+ W F D+ SG L +VS G
Sbjct: 284 SS---KAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVE--PGSQ 338
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
S FHPDGLI GTG ++A+VKIWD+K+Q A F GH AV +I+FSENGYYLAT
Sbjct: 339 IAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATG 398
Query: 418 AHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADW 476
+ DG VKLWDLRKLKN ++F + + + P NS+ FD +G++L + ++V V S W
Sbjct: 399 SEDGEVKLWDLRKLKNLKTFANEEKQ-PINSLSFDMTGTFLGIGGQKVQVLHVKS----W 453
Query: 477 NCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ + + D SG T V+FG +A+ + S+D++LRVF
Sbjct: 454 SEVVSLSDHSGP--VTGVRFGENARSLVTCSLDKSLRVF 490
Score = 381 (139.2 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 97/231 (41%), Positives = 134/231 (58%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVK-P 61
C ISGE+ E+PVVS+ SG +F++RLI + I + G P++ L+ D +V +K+G P
Sbjct: 5 CGISGELTEDPVVSQVSGHIFDRRLIVKFIAENGTDPISHGELSEDQLVSLKSGGTGSAP 64
Query: 62 RPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKE 121
R ++ SIP +L M Q+EWD +ML++F+L QQL ARQELSH+LYQHDAACRVI+RL KE
Sbjct: 65 RNVSGTSIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISRLSKE 124
Query: 122 RDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAEL 181
AR L+ + P S V + ++ E ED + L I A + E
Sbjct: 125 LTAAREALST----LKPHTSAKVDDDVSID------ESEDQ----QGLSEAIL-AKLEEK 169
Query: 182 TDCNAALSQQRKKRQVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDI 231
+ A +QR K +P LA + L Q ASH +H T PGI +LDI
Sbjct: 170 SKSLTAERKQRGKN-LPEGLAKTEELAELKQTASHTGIHSTGTPGITALDI 219
Score = 141 (54.7 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 44/194 (22%), Positives = 83/194 (42%)
Query: 326 VTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWD 385
+T +D T YD QV G + + HPD + + ++++ +++W
Sbjct: 225 LTGGIDKTVVLYDYEK----EQVMQT-FKGHNKKINAVVLHPDNITAISASADSHIRVWS 279
Query: 386 VKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLW-DLRKLKNFRSFE-SSDSET 443
++ A D H VT IS + +G Y+ +A+ D + D+R K+ S+
Sbjct: 280 ATDSSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQI 339
Query: 444 PTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYI 503
+S++F G +AD V ++ +K + FP T + F + Y+
Sbjct: 340 AVHSIEFHPDGLIFGTGAADA-VVKIWDLK-NQTVAAAFP--GHTAAVRSIAFSENGYYL 395
Query: 504 AVGSMDRNLRVFGL 517
A GS D ++++ L
Sbjct: 396 ATGSEDGEVKLWDL 409
>GENEDB_PFALCIPARUM|PFC0365w [details] [associations]
symbol:PFC0365w "conserved protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 143/474 (30%), Positives = 247/474 (52%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
C+ISG+ PEEPV+SK +G +FEKRLIE+HI++YG CPV+GE LT++D+ PIK KIVKPR
Sbjct: 5 CTISGQTPEEPVISK-TGYIFEKRLIEKHIINYGICPVSGEVLTLEDLYPIKNEKIVKPR 63
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P+TA+SIPG+L +FQ EWD ++ F+L ++ R ELSH+LYQ+DAA RVIA+L KE+
Sbjct: 64 PITASSIPGLLSIFQTEWDSIISEMFSLRTHVNDIRNELSHSLYQYDAATRVIAKLLKEK 123
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
+ + + ++QI +S SN D D+ G+ ++ ++
Sbjct: 124 NGYKEEIENLKKQIFQLKS----SN-----------DLDI------YEIGLNEELLEKMQ 162
Query: 183 DCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGI--VSLDIH-----YSK 235
+ L RKKR++ + ++ + + +H ++ PG+ ++LD++ Y+
Sbjct: 163 NVAKDLLINRKKRKIDNVCS-VEQWKDFKNTNEFNIHSSTIPGVTCITLDVNKYKYNYND 221
Query: 236 DVIA----TGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
D + +GG D N +I++ L GH KKV S+ + +T S DKT+R+
Sbjct: 222 DHMKHNFFSGGNDGNVYYVSLNDNKILSKLQGHLKKVNSIISHPSNFICITASNDKTIRI 281
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS-LDNTWCFYDLSSGICLTQVSD 350
W+G +D N H H + + + N S L+N YD + ++
Sbjct: 282 WKG-DDNNV---H----HNDNGDSDSDNNNNNNDNDGSHLNNNEYIYDNYQFVSAHVITK 333
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSEN 410
+ TS A HP + + +++ + D+++ + + + ++ +
Sbjct: 334 -----HKDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKDNPSSFKHLAIHPD 388
Query: 411 GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
G AA D + ++D+ K + +++ + +++ N + F +G YLA +S D
Sbjct: 389 GMMFGIAAQDSNIHIYDI-KSQEYKATLNGHTKS-LNCLSFSENGYYLASSSKD 440
Score = 352 (129.0 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 75/214 (35%), Positives = 119/214 (55%)
Query: 304 HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSA 363
H + H V ++ +H YF+++S D+ W +DL + + D P +
Sbjct: 329 HVITKHKDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKD-----NPSSFKHL 383
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-V 422
A HPDG++ G ++ + I+D+KSQ A +GH ++ +SFSENGYYLA+++ D V
Sbjct: 384 AIHPDGMMFGIAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFSENGYYLASSSKDNTV 443
Query: 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVA-SADIRVYQVASVKADWNCIKT 481
KLWDLRK ++F++ + ETP N + FD+SG YL++A DI++Y + K N IKT
Sbjct: 444 KLWDLRKAQSFQTITLN--ETP-NFISFDYSGKYLSIAVENDIQIYNFET-KNQANLIKT 499
Query: 482 FPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ TC FG YI SMD+ ++++
Sbjct: 500 LSSHTDIVTQTC--FGSTTSYILSSSMDKTIKLW 531
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 47/222 (21%), Positives = 90/222 (40%)
Query: 208 ERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKK 267
+ Y +++H + K K + SL +H ++ + D+ +L D + + + T +
Sbjct: 321 DNYQFVSAHVITK-HKDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKDNPSS 379
Query: 268 VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVT 327
+ +G +F + D + ++ + Y K TL HT + ++ Y +
Sbjct: 380 FKHLAIHPDGMMFGIAAQDSNIHIYD-IKSQEY--KATLNGHTKSLNCLSFSENGYYLAS 436
Query: 328 ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDV 386
+S DNT +DL + T + S F G L + + ++
Sbjct: 437 SSKDNTVKLWDLRKAQSFQTI----TLNETPNFIS--FDYSGKYLSIAVENDIQIYNFET 490
Query: 387 KSQANVAK-FDGHVGAVTAISF-SENGYYLATAAHDGVKLWD 426
K+QAN+ K H VT F S Y L+++ +KLW+
Sbjct: 491 KNQANLIKTLSSHTDIVTQTCFGSTTSYILSSSMDKTIKLWN 532
>UNIPROTKB|O77325 [details] [associations]
symbol:PFC0365w "PRP19-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear
matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 143/474 (30%), Positives = 247/474 (52%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
C+ISG+ PEEPV+SK +G +FEKRLIE+HI++YG CPV+GE LT++D+ PIK KIVKPR
Sbjct: 5 CTISGQTPEEPVISK-TGYIFEKRLIEKHIINYGICPVSGEVLTLEDLYPIKNEKIVKPR 63
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P+TA+SIPG+L +FQ EWD ++ F+L ++ R ELSH+LYQ+DAA RVIA+L KE+
Sbjct: 64 PITASSIPGLLSIFQTEWDSIISEMFSLRTHVNDIRNELSHSLYQYDAATRVIAKLLKEK 123
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
+ + + ++QI +S SN D D+ G+ ++ ++
Sbjct: 124 NGYKEEIENLKKQIFQLKS----SN-----------DLDI------YEIGLNEELLEKMQ 162
Query: 183 DCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGI--VSLDIH-----YSK 235
+ L RKKR++ + ++ + + +H ++ PG+ ++LD++ Y+
Sbjct: 163 NVAKDLLINRKKRKIDNVCS-VEQWKDFKNTNEFNIHSSTIPGVTCITLDVNKYKYNYND 221
Query: 236 DVIA----TGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
D + +GG D N +I++ L GH KKV S+ + +T S DKT+R+
Sbjct: 222 DHMKHNFFSGGNDGNVYYVSLNDNKILSKLQGHLKKVNSIISHPSNFICITASNDKTIRI 281
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS-LDNTWCFYDLSSGICLTQVSD 350
W+G +D N H H + + + N S L+N YD + ++
Sbjct: 282 WKG-DDNNV---H----HNDNGDSDSDNNNNNNDNDGSHLNNNEYIYDNYQFVSAHVITK 333
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSEN 410
+ TS A HP + + +++ + D+++ + + + ++ +
Sbjct: 334 -----HKDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKDNPSSFKHLAIHPD 388
Query: 411 GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
G AA D + ++D+ K + +++ + +++ N + F +G YLA +S D
Sbjct: 389 GMMFGIAAQDSNIHIYDI-KSQEYKATLNGHTKS-LNCLSFSENGYYLASSSKD 440
Score = 352 (129.0 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 75/214 (35%), Positives = 119/214 (55%)
Query: 304 HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSA 363
H + H V ++ +H YF+++S D+ W +DL + + D P +
Sbjct: 329 HVITKHKDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKD-----NPSSFKHL 383
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-V 422
A HPDG++ G ++ + I+D+KSQ A +GH ++ +SFSENGYYLA+++ D V
Sbjct: 384 AIHPDGMMFGIAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFSENGYYLASSSKDNTV 443
Query: 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVA-SADIRVYQVASVKADWNCIKT 481
KLWDLRK ++F++ + ETP N + FD+SG YL++A DI++Y + K N IKT
Sbjct: 444 KLWDLRKAQSFQTITLN--ETP-NFISFDYSGKYLSIAVENDIQIYNFET-KNQANLIKT 499
Query: 482 FPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ TC FG YI SMD+ ++++
Sbjct: 500 LSSHTDIVTQTC--FGSTTSYILSSSMDKTIKLW 531
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 47/222 (21%), Positives = 90/222 (40%)
Query: 208 ERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKK 267
+ Y +++H + K K + SL +H ++ + D+ +L D + + + T +
Sbjct: 321 DNYQFVSAHVITK-HKDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKDNPSS 379
Query: 268 VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVT 327
+ +G +F + D + ++ + Y K TL HT + ++ Y +
Sbjct: 380 FKHLAIHPDGMMFGIAAQDSNIHIYD-IKSQEY--KATLNGHTKSLNCLSFSENGYYLAS 436
Query: 328 ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDV 386
+S DNT +DL + T + S F G L + + ++
Sbjct: 437 SSKDNTVKLWDLRKAQSFQTI----TLNETPNFIS--FDYSGKYLSIAVENDIQIYNFET 490
Query: 387 KSQANVAK-FDGHVGAVTAISF-SENGYYLATAAHDGVKLWD 426
K+QAN+ K H VT F S Y L+++ +KLW+
Sbjct: 491 KNQANLIKTLSSHTDIVTQTCFGSTTSYILSSSMDKTIKLWN 532
>UNIPROTKB|F5GY56 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00504 PROSITE:PS00678 InterPro:IPR019775 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AP003721
InterPro:IPR013915 Pfam:PF08606 EMBL:AP000777 HGNC:HGNC:17896
IPI:IPI01011381 ProteinModelPortal:F5GY56 SMR:F5GY56
Ensembl:ENST00000541371 ArrayExpress:F5GY56 Bgee:F5GY56
Uniprot:F5GY56
Length = 252
Score = 481 (174.4 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 115/253 (45%), Positives = 152/253 (60%)
Query: 3 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPR 62
CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+
Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64
Query: 63 PLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 65 PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
AR LA + Q AV S+ G A E DLG G+TP II +L
Sbjct: 125 TAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQ 177
Query: 183 DCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSK-DVI 238
D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I
Sbjct: 178 DKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKI 237
Query: 239 ATGGVDTNAVLFD 251
TG +D+ ++D
Sbjct: 238 LTGTMDSQIKIWD 250
Score = 51 (23.0 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 374 TGTSEALVKIWDVK 387
TGT ++ +KIWD+K
Sbjct: 239 TGTMDSQIKIWDLK 252
>POMBASE|SPAC29A4.08c [details] [associations]
symbol:prp19 "ubiquitin-protein ligase E4" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 PomBase:SPAC29A4.08c
GO:GO:0005829 GO:GO:0005635 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005681 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0000151
GO:GO:0045292 EMBL:AF254351 PIR:T38481 RefSeq:NP_594874.1
ProteinModelPortal:O14011 DIP:DIP-34861N IntAct:O14011
STRING:O14011 EnsemblFungi:SPAC29A4.08c.1 GeneID:2542256
KEGG:spo:SPAC29A4.08c eggNOG:NOG319177 KO:K10599 OMA:LESFTIR
OrthoDB:EOG4M0JB3 NextBio:20803321 InterPro:IPR013915 Pfam:PF08606
Uniprot:O14011
Length = 488
Score = 369 (135.0 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 85/212 (40%), Positives = 123/212 (58%)
Query: 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVK 60
M CSISGE P+EPV+S+ SG ++EKRLIE+ I + K PVT + T++D+VP+K V+
Sbjct: 1 MFCSISGETPKEPVISRVSGNVYEKRLIEQVIRETSKDPVTQQECTLEDLVPVKVPDFVR 60
Query: 61 PRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
PRP +A S+P +L +FQ EWD + L F L + L +QELS ALY DAA RVI+RL K
Sbjct: 61 PRPPSATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTK 120
Query: 121 ERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAE 180
ERDEAR LA+ I S + ++ ++G + +L T + +
Sbjct: 121 ERDEAREALAKFSDNIGTVSSKTIEV-----------QEVEMGESDDQLKTSLRSTVEKT 169
Query: 181 LTDCNAALSQQRKKRQVPPALAPIDALERYTQ 212
+ LS +RK+ ++ P A DA+ + Q
Sbjct: 170 FQE----LSSKRKRTKLQPKWATDDAVSQLLQ 197
Score = 145 (56.1 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 47/173 (27%), Positives = 77/173 (44%)
Query: 312 EVQAVTVHATNKYFVTASLDNTWCF-YDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370
+V + H + +Y + AS N C+ + L S + V+ + TS A HPDG
Sbjct: 297 KVNFLQAHPSGEYLLAAS--NEKCYIFSLKSQVYNITVA--------QHITSLAVHPDGN 346
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG--VKLWDLR 428
+ G ++ ++ S + KF H V + F ENGY+L +D + +WDLR
Sbjct: 347 LFVAGLENGELRFFETSSGNELTKFGPHSSPVKTLQFGENGYWLVVTTNDDSDIFIWDLR 406
Query: 429 KLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKAD--WNCI 479
K + + +T +V D + S L V+S +Y VK+ W C+
Sbjct: 407 KSELVQKIPL---QTKVAAVSLDIT-SQLLVSSDGETLYVHIYVKSSKSWRCM 455
Score = 68 (29.0 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 213 LASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVK 272
L S + T I SL +H ++ G + F+ SG +T HS V +++
Sbjct: 323 LKSQVYNITVAQHITSLAVHPDGNLFVAGLENGELRFFETSSGNELTKFGPHSSPVKTLQ 382
Query: 273 FVTEGD-LFLTGSADKTVRVW 292
F G L +T + D + +W
Sbjct: 383 FGENGYWLVVTTNDDSDIFIW 403
Score = 51 (23.0 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 25/112 (22%), Positives = 49/112 (43%)
Query: 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
L H S + + + +F S T++ H +TS+ +G+LF+ G +
Sbjct: 301 LQAHPSGEYLLAAS-NEKCYIFSLKSQVYNITVAQH---ITSLAVHPDGNLFVAGLENGE 356
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCF-YDL 339
+R ++ S GN K H++ V+ + + V + D++ F +DL
Sbjct: 357 LRFFETSS-GNELTK--FGPHSSPVKTLQFGENGYWLVVTTNDDSDIFIWDL 405
>UNIPROTKB|H9L227 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR000772
PROSITE:PS50231 GeneTree:ENSGT00700000104487 EMBL:AADN02059449
EMBL:AADN02059450 Ensembl:ENSGALT00000035741 Uniprot:H9L227
Length = 219
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 95/220 (43%), Positives = 129/220 (58%)
Query: 191 QRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSK-DVIATGGVDTN 246
+RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I TGG D N
Sbjct: 2 ERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKN 61
Query: 247 AVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTL 306
++FD+ S QI+ TL GHSKKVTSV F DL + S D T+R+W N C +
Sbjct: 62 VIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVP---NASCVQVV 118
Query: 307 KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFH 366
+ H V +++HAT Y +++S D W F D+ +G LT+V+D + T A FH
Sbjct: 119 RAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGC---ALTCAQFH 175
Query: 367 PDGLILGTGTSEALVKIWDVK--SQANVAKFDGHVGAVTA 404
PDGLI GTGT ++ +KIWD+K +Q V + G VG TA
Sbjct: 176 PDGLIFGTGTMDSQIKIWDLKRGAQGLVGERRGQVGPPTA 215
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 46/181 (25%), Positives = 81/181 (44%)
Query: 256 QIVTTLSGHSKKVTSVKFV----TEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
Q+ + + HS + + + ++ + LTG ADK V V+ S + TLK H+
Sbjct: 25 QVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSE---QILATLKGHSK 81
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+V +V H + +AS D T + + + C+ QV A +G T + H G
Sbjct: 82 KVTSVVFHPSQDLVFSASPDATIRIWSVPNASCV-QVVRAH-EG---SVTGLSLHATGDY 136
Query: 372 LGTGTSEALVKIWDVKSQANVAKF-DGHVG-AVTAISFSENGYYLATAAHDG-VKLWDLR 428
L + + + D+++ + K D G A+T F +G T D +K+WDL+
Sbjct: 137 LLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLK 196
Query: 429 K 429
+
Sbjct: 197 R 197
Score = 113 (44.8 bits), Expect = 0.00057, P = 0.00057
Identities = 31/145 (21%), Positives = 67/145 (46%)
Query: 374 TGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN 432
TG ++ V ++D S+ +A GH VT++ F + + +A+ D +++W +
Sbjct: 55 TGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASC 114
Query: 433 FRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKAT 492
+ + + + +G YL ++S+D + + + ++ K + SG T
Sbjct: 115 VQVVRAHEGSV--TGLSLHATGDYL-LSSSDDQYWAFSDIQTGRVLTKVTDESSGCA-LT 170
Query: 493 CVKFGPDAKYIAVGSMDRNLRVFGL 517
C +F PD G+MD ++++ L
Sbjct: 171 CAQFHPDGLIFGTGTMDSQIKIWDL 195
>CGD|CAL0004852 [details] [associations]
symbol:orf19.6740 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000349 "generation of catalytic
spliceosome for first transesterification step" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF04564 SMART:SM00504
CGD:CAL0004852 Gene3D:2.130.10.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR011044
SUPFAM:SSF50969 eggNOG:NOG319177 KO:K10599 InterPro:IPR013915
Pfam:PF08606 EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719721.1
RefSeq:XP_719838.1 ProteinModelPortal:Q5ADV1 STRING:Q5ADV1
GeneID:3638529 GeneID:3638592 KEGG:cal:CaO19.14032
KEGG:cal:CaO19.6740 HOGENOM:HOG000248784 Uniprot:Q5ADV1
Length = 446
Score = 296 (109.3 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 68/175 (38%), Positives = 100/175 (57%)
Query: 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGK--- 57
M CSISGE+ +PVVS SG +F+++ I +I G P+T EPLT +++ +K +
Sbjct: 1 MICSISGEIATDPVVSPKSGAIFQRKHIVNYIATSGTDPITDEPLTESELISLKVNEKST 60
Query: 58 -IVKPRPL--TAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRV 114
I +P P + +SIP +L FQNEWD ++L F L++QL +A+QELS ALY+ DAA V
Sbjct: 61 AIAQPSPPDPSNSSIPSLLSTFQNEWDAIVLEVFTLKKQLQSAKQELSIALYRQDAAVNV 120
Query: 115 IARLKKERDEARSLLAQ--SERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGK 167
A+ +ERDEAR L + S + T A K++ + G + K
Sbjct: 121 AAKAIRERDEAREALEKLSSSINLSDVPDTNTPPEEAEPKPKKSKKSSSKGTSAK 175
Score = 79 (32.9 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 25/110 (22%), Positives = 49/110 (44%)
Query: 222 SKPGIVSLD-IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF 280
S+ G++SL +HY +++AT D L+ SG + T + + + ++F T G
Sbjct: 337 SRNGVLSLGALHYDGEILATKN-DDKIKLYSIVSGDELGTFTATHENIAKLEFATNGYWL 395
Query: 281 L---TGSADKTVRVW---QGSEDGNYDCKHTLKDHTAEVQAVTVHATNKY 324
L TG +++++ +G E N + ++H+ KY
Sbjct: 396 LALSTGDNTSSIQIFDLRKGIEVQNLQFNEVATKKIGNIMFYSLHSFFKY 445
Score = 78 (32.5 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL-ATAAHDG- 421
A H DG IL T + +K++ + S + F + + F+ NGY+L A + D
Sbjct: 346 ALHYDGEILATKNDDK-IKLYSIVSGDELGTFTATHENIAKLEFATNGYWLLALSTGDNT 404
Query: 422 --VKLWDLRK 429
++++DLRK
Sbjct: 405 SSIQIFDLRK 414
Score = 43 (20.2 bits), Expect = 8.6e-25, Sum P(2) = 8.6e-25
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 382 KIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDS 441
K W V S ++ V ++ A+ + +G LAT D +KL+ + +F ++
Sbjct: 324 KKWFVISTDSIVASRNGVLSLGALHY--DGEILATKNDDKIKLYSIVSGDELGTFTATHE 381
Query: 442 ETPTNSVDFDHSGSYL-AVASAD 463
++F +G +L A+++ D
Sbjct: 382 NIA--KLEFATNGYWLLALSTGD 402
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 302 (111.4 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 103/365 (28%), Positives = 167/365 (45%)
Query: 161 DLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHP--L 218
DLGP+ T ++ A++ E+ L+ R + QV + + E+ Q ++H L
Sbjct: 34 DLGPS-----TDVS-ALVEEIQKAEPLLTASRTE-QVKLLIQRLQ--EKLGQNSNHTFYL 84
Query: 219 HKTSKPGIVSLD---IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT 275
K K I+ L ++ S TG D L+D SG+ + TL GH V ++ F
Sbjct: 85 FKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNN 144
Query: 276 E-GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTW 334
GD TGS DKT ++W E G C HT + HTAE+ ++ + + T S+D T
Sbjct: 145 PYGDKIATGSFDKTCKLWS-VETGK--CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 201
Query: 335 CFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAK 394
+D+ +G +V G S +F+ G + TG+ + V +WD + V
Sbjct: 202 KLWDIQNG---EEVYTLR--GHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNI 256
Query: 395 FDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453
GH +++ SF+ + + T + D KLWD K + D E + FD++
Sbjct: 257 LIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSC--FDYT 314
Query: 454 GSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDR 510
G +A ASAD R++ A+ K CI L G G+ + + F P ++ GS D+
Sbjct: 315 GKLIATASADGTARIFSAATRK----CIAK---LEGHEGEISKISFNPQGNHLLTGSSDK 367
Query: 511 NLRVF 515
R++
Sbjct: 368 TARIW 372
Score = 282 (104.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 69/239 (28%), Positives = 122/239 (51%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
IV L + ++ATG +DT A L+D +G+ V TL GHS ++ S+ F T GD +TGS
Sbjct: 180 IVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSF 239
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D TV VW ++ G + L H AE+ + + + +T S+D T +D ++G C+
Sbjct: 240 DHTVVVWD-ADTGRK--VNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCV 296
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
++ G + + F G ++ T +++ +I+ ++ +AK +GH G ++ I
Sbjct: 297 ATLT-----GHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKI 351
Query: 406 SFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
SF+ G +L T + D ++WD + + + E E S F++ G+ + S D
Sbjct: 352 SFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEI--FSCAFNYKGNIVITGSKD 408
Score = 233 (87.1 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 69/282 (24%), Positives = 128/282 (45%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
D IATG D L+ +G+ T GH+ ++ + F + L TGS D T ++W
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD-I 206
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
++G +TL+ H+AE+ +++ + + +T S D+T +D +G + + G
Sbjct: 207 QNGEE--VYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILI-----G 259
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA 415
+SA+F+ D ++ TG+ + K+WD + VA GH + F G +A
Sbjct: 260 HCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIA 319
Query: 416 TAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKA 474
TA+ DG +++ K E + E + + F+ G++L S+D + ++ +
Sbjct: 320 TASADGTARIFSAATRKCIAKLEGHEGEI--SKISFNPQGNHLLTGSSD-KTARIWDAQT 376
Query: 475 DWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
C++ L G T + F + GS D R++
Sbjct: 377 G-QCLQV---LEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 314 (115.6 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 97/357 (27%), Positives = 168/357 (47%)
Query: 178 IAELTDCNAALSQQRKKRQVPPALAPIDALERYT-QLASHPLHKTSKPGIVS--LDIHYS 234
IA+ + AA+ QR KR+ +DA ++ + A H S G +S
Sbjct: 205 IAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGCSFS 264
Query: 235 KD--VIATGGVDTNAVLFDRPS-GQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
+D ++AT + L++ P + L H ++ T V F D T SAD+T ++
Sbjct: 265 RDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKL 324
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
W+ DG T + H + V H + KY T S D TW +D+++G L
Sbjct: 325 WK--TDGTL--LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLL---- 376
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411
+G AF DG + + ++L ++WD+++ ++ F GH+ V +++FS NG
Sbjct: 377 -QEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNG 435
Query: 412 YYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFD-HSGSYLAVASADIRVYQV 469
Y+LA+ D ++WDLR K+ + + + V ++ G +LA AS D++V +
Sbjct: 436 YHLASGGEDNQCRIWDLRMRKSLYIIPAHANLV--SQVKYEPQEGYFLATASYDMKV-NI 492
Query: 470 ASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
S + D++ +K+ L+G K + D+ IA S DR ++++ GND E
Sbjct: 493 WSGR-DFSLVKS---LAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDE 545
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 297 (109.6 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 71/239 (29%), Positives = 119/239 (49%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
IV L + V+ATG +DT A L+D SG+ V TL+GH ++ S+ F T GD +TGS
Sbjct: 180 IVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSF 239
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D TV VW S HTL H AE+ + +T S+D T +D +SG C+
Sbjct: 240 DHTVVVWDASTGRKV---HTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCV 296
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
++ G + + F G ++ T +++ ++++ ++ + K +GH G ++ I
Sbjct: 297 ATLT-----GHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKI 351
Query: 406 SFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
SF+ G L T + D ++WD++ + + E E S F++ G+ + S D
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEI--FSCAFNYKGNIVITGSKD 408
Score = 219 (82.2 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 70/282 (24%), Positives = 123/282 (43%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
D IATG D L+ +G+ T GH+ ++ + F + + TGS D T ++W
Sbjct: 148 DKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWD-I 206
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
+ G TL H AE+ +++ + +T S D+T +D S+G + + G
Sbjct: 207 QSGEEVV--TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLI-----G 259
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA 415
+SA F D ++ TG+ + +WD S VA GH + F G +A
Sbjct: 260 HCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIA 319
Query: 416 TAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKA 474
TA+ DG ++++ K E + E + + F+ G+ L S+D + ++ V+
Sbjct: 320 TASADGTARVYNATTRKCITKLEGHEGEI--SKISFNPQGNRLLTGSSD-KTARIWDVQT 376
Query: 475 DWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
C++ L G T + F + GS D + R++
Sbjct: 377 G-QCLQV---LEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 76/298 (25%), Positives = 118/298 (39%)
Query: 224 PGIVSLDIHYSKDVIATGGVDTNAV-LFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLT 282
PGI+ + Y K G + T ++ L + V TL G +KV + +T
Sbjct: 13 PGIM---LEYEKG----GELKTKSIDLLELSPSTDVNTLVGEIQKVEPL---------IT 56
Query: 283 GSADKTVR--VWQGSEDGNYDCKHT------LKDHTAEVQAVTVHATNKYFVTASLDNTW 334
S K VR V + E C H L+ H + V ++ F+T S D T
Sbjct: 57 ASRTKQVRLLVQRLQEKLRQHCDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTC 116
Query: 335 CFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAK 394
+D +SG L + R Y A +P G + TG+ + K+W ++
Sbjct: 117 KVWDTASGEELHTLEGH----RNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHT 172
Query: 395 FDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453
F GH + +SF+ +AT + D KLWD++ + + +E S+ FD S
Sbjct: 173 FRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEII--SLSFDTS 230
Query: 454 GSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDR 510
G + S D V V D + + L G + + F D I GSMD+
Sbjct: 231 GDRIITGSFDHTV-----VVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDK 283
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 282 (104.3 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 72/270 (26%), Positives = 134/270 (49%)
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
+P+ + TL+GH+K V+SVKF G+ + SADK +++W G+ DG ++ T+ H
Sbjct: 6 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKL 62
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+ V + + V+AS D T +D+SSG CL + G F+P +
Sbjct: 63 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNL 117
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKL 430
+ +G+ + V+IWDVK+ + H V+A+ F+ +G + ++++DG+ ++WD
Sbjct: 118 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 177
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGT 488
+ ++ D+ P + V F +G Y+ A+ D ++++ + K C+KT+
Sbjct: 178 QCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYTGHKNE 232
Query: 489 GKATCVKFG-PDAKYIAVGSMDRNLRVFGL 517
F K+I GS D + ++ L
Sbjct: 233 KYCIFANFSVTGGKWIVSGSEDNLVYIWNL 262
Score = 219 (82.2 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 73/273 (26%), Positives = 129/273 (47%)
Query: 198 PPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQI 257
P + P AL ++T LA H +K + S+ + + +A+ D ++ G+
Sbjct: 2 PTPVKPNYAL-KFT-LAGH-----TK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 53
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
T+SGH ++ V + ++ +L ++ S DKT+++W S G C TLK H+ V
Sbjct: 54 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYVFCCN 110
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ + V+ S D + +D+ +G CL + A +D P ++ F+ DG ++ + +
Sbjct: 111 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSD--P--VSAVHFNRDGSLIVSSSY 165
Query: 378 EALVKIWDVKS-QANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435
+ L +IWD S Q D V+ + FS NG Y+ A D +KLWD K K ++
Sbjct: 166 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 225
Query: 436 FESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
+ +E +F +G ++ S D VY
Sbjct: 226 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 258
Score = 203 (76.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ +S D ++ + D ++D SG+ + TL GHS V F + +L ++GS D+
Sbjct: 66 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 125
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+VR+W + G C TL H+ V AV + V++S D +D +SG CL
Sbjct: 126 SVRIWD-VKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 182
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
+ D D P + F P+G + T + +K+WD + + GH I
Sbjct: 183 LID--DDNPPVSFVK--FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 238
Query: 406 SFS-ENGYYLATAAHDG-VKLWDLR 428
+FS G ++ + + D V +W+L+
Sbjct: 239 NFSVTGGKWIVSGSEDNLVYIWNLQ 263
Score = 199 (75.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++I +G D + ++D +G+ + TL HS V++V F +G L ++ S D R+W +
Sbjct: 116 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-T 174
Query: 296 EDGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
G C TL D V V KY + A+LDNT +D S G CL T
Sbjct: 175 ASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY----TG 228
Query: 355 GRPEGYTSAA-FH-PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV--TAISFSEN 410
+ E Y A F G + +G+ + LV IW+++++ V K GH V TA +EN
Sbjct: 229 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 288
Query: 411 GYYLATAAHDG-VKLW 425
A +D +KLW
Sbjct: 289 IIASAALENDKTIKLW 304
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 282 (104.3 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 72/270 (26%), Positives = 134/270 (49%)
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
+P+ + TL+GH+K V+SVKF G+ + SADK +++W G+ DG ++ T+ H
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKL 88
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+ V + + V+AS D T +D+SSG CL + G F+P +
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNL 143
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKL 430
+ +G+ + V+IWDVK+ + H V+A+ F+ +G + ++++DG+ ++WD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGT 488
+ ++ D+ P + V F +G Y+ A+ D ++++ + K C+KT+
Sbjct: 204 QCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYTGHKNE 258
Query: 489 GKATCVKFG-PDAKYIAVGSMDRNLRVFGL 517
F K+I GS D + ++ L
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 219 (82.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 73/273 (26%), Positives = 129/273 (47%)
Query: 198 PPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQI 257
P + P AL ++T LA H +K + S+ + + +A+ D ++ G+
Sbjct: 28 PTPVKPNYAL-KFT-LAGH-----TK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
T+SGH ++ V + ++ +L ++ S DKT+++W S G C TLK H+ V
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYVFCCN 136
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ + V+ S D + +D+ +G CL + A +D P ++ F+ DG ++ + +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSD--P--VSAVHFNRDGSLIVSSSY 191
Query: 378 EALVKIWDVKS-QANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435
+ L +IWD S Q D V+ + FS NG Y+ A D +KLWD K K ++
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 436 FESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
+ +E +F +G ++ S D VY
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Score = 203 (76.5 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ +S D ++ + D ++D SG+ + TL GHS V F + +L ++GS D+
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+VR+W + G C TL H+ V AV + V++S D +D +SG CL
Sbjct: 152 SVRIWD-VKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
+ D D P + F P+G + T + +K+WD + + GH I
Sbjct: 209 LID--DDNPPVSFVK--FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 406 SFS-ENGYYLATAAHDG-VKLWDLR 428
+FS G ++ + + D V +W+L+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQ 289
Score = 199 (75.1 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++I +G D + ++D +G+ + TL HS V++V F +G L ++ S D R+W +
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-T 200
Query: 296 EDGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
G C TL D V V KY + A+LDNT +D S G CL T
Sbjct: 201 ASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY----TG 254
Query: 355 GRPEGYTSAA-FH-PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV--TAISFSEN 410
+ E Y A F G + +G+ + LV IW+++++ V K GH V TA +EN
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 314
Query: 411 GYYLATAAHDG-VKLW 425
A +D +KLW
Sbjct: 315 IIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 282 (104.3 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 72/270 (26%), Positives = 134/270 (49%)
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
+P+ + TL+GH+K V+SVKF G+ + SADK +++W G+ DG ++ T+ H
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKL 88
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+ V + + V+AS D T +D+SSG CL + G F+P +
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNL 143
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKL 430
+ +G+ + V+IWDVK+ + H V+A+ F+ +G + ++++DG+ ++WD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGT 488
+ ++ D+ P + V F +G Y+ A+ D ++++ + K C+KT+
Sbjct: 204 QCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYTGHKNE 258
Query: 489 GKATCVKFG-PDAKYIAVGSMDRNLRVFGL 517
F K+I GS D + ++ L
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 219 (82.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 73/273 (26%), Positives = 129/273 (47%)
Query: 198 PPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQI 257
P + P AL ++T LA H +K + S+ + + +A+ D ++ G+
Sbjct: 28 PTPVKPNYAL-KFT-LAGH-----TK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
T+SGH ++ V + ++ +L ++ S DKT+++W S G C TLK H+ V
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYVFCCN 136
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ + V+ S D + +D+ +G CL + A +D P ++ F+ DG ++ + +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSD--P--VSAVHFNRDGSLIVSSSY 191
Query: 378 EALVKIWDVKS-QANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435
+ L +IWD S Q D V+ + FS NG Y+ A D +KLWD K K ++
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 436 FESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
+ +E +F +G ++ S D VY
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Score = 203 (76.5 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ +S D ++ + D ++D SG+ + TL GHS V F + +L ++GS D+
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+VR+W + G C TL H+ V AV + V++S D +D +SG CL
Sbjct: 152 SVRIWD-VKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
+ D D P + F P+G + T + +K+WD + + GH I
Sbjct: 209 LID--DDNPPVSFVK--FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 406 SFS-ENGYYLATAAHDG-VKLWDLR 428
+FS G ++ + + D V +W+L+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQ 289
Score = 199 (75.1 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++I +G D + ++D +G+ + TL HS V++V F +G L ++ S D R+W +
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-T 200
Query: 296 EDGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
G C TL D V V KY + A+LDNT +D S G CL T
Sbjct: 201 ASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY----TG 254
Query: 355 GRPEGYTSAA-FH-PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV--TAISFSEN 410
+ E Y A F G + +G+ + LV IW+++++ V K GH V TA +EN
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 314
Query: 411 GYYLATAAHDG-VKLW 425
A +D +KLW
Sbjct: 315 IIASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 282 (104.3 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 72/270 (26%), Positives = 134/270 (49%)
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
+P+ + TL+GH+K V+SVKF G+ + SADK +++W G+ DG ++ T+ H
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKL 88
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+ V + + V+AS D T +D+SSG CL + G F+P +
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNL 143
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKL 430
+ +G+ + V+IWDVK+ + H V+A+ F+ +G + ++++DG+ ++WD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGT 488
+ ++ D+ P + V F +G Y+ A+ D ++++ + K C+KT+
Sbjct: 204 QCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYTGHKNE 258
Query: 489 GKATCVKFG-PDAKYIAVGSMDRNLRVFGL 517
F K+I GS D + ++ L
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 219 (82.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 73/273 (26%), Positives = 129/273 (47%)
Query: 198 PPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQI 257
P + P AL ++T LA H +K + S+ + + +A+ D ++ G+
Sbjct: 28 PTPVKPNYAL-KFT-LAGH-----TK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
T+SGH ++ V + ++ +L ++ S DKT+++W S G C TLK H+ V
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYVFCCN 136
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ + V+ S D + +D+ +G CL + A +D P ++ F+ DG ++ + +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSD--P--VSAVHFNRDGSLIVSSSY 191
Query: 378 EALVKIWDVKS-QANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435
+ L +IWD S Q D V+ + FS NG Y+ A D +KLWD K K ++
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 436 FESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
+ +E +F +G ++ S D VY
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Score = 203 (76.5 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ +S D ++ + D ++D SG+ + TL GHS V F + +L ++GS D+
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+VR+W + G C TL H+ V AV + V++S D +D +SG CL
Sbjct: 152 SVRIWD-VKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
+ D D P + F P+G + T + +K+WD + + GH I
Sbjct: 209 LID--DDNPPVSFVK--FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 406 SFS-ENGYYLATAAHDG-VKLWDLR 428
+FS G ++ + + D V +W+L+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQ 289
Score = 199 (75.1 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++I +G D + ++D +G+ + TL HS V++V F +G L ++ S D R+W +
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-T 200
Query: 296 EDGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
G C TL D V V KY + A+LDNT +D S G CL T
Sbjct: 201 ASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY----TG 254
Query: 355 GRPEGYTSAA-FH-PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV--TAISFSEN 410
+ E Y A F G + +G+ + LV IW+++++ V K GH V TA +EN
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 314
Query: 411 GYYLATAAHDG-VKLW 425
A +D +KLW
Sbjct: 315 IIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 282 (104.3 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 72/270 (26%), Positives = 134/270 (49%)
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
+P+ + TL+GH+K V+SVKF G+ + SADK +++W G+ DG ++ T+ H
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKL 88
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+ V + + V+AS D T +D+SSG CL + G F+P +
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNL 143
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKL 430
+ +G+ + V+IWDVK+ + H V+A+ F+ +G + ++++DG+ ++WD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGT 488
+ ++ D+ P + V F +G Y+ A+ D ++++ + K C+KT+
Sbjct: 204 QCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYTGHKNE 258
Query: 489 GKATCVKFG-PDAKYIAVGSMDRNLRVFGL 517
F K+I GS D + ++ L
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 219 (82.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 73/273 (26%), Positives = 129/273 (47%)
Query: 198 PPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQI 257
P + P AL ++T LA H +K + S+ + + +A+ D ++ G+
Sbjct: 28 PTPVKPNYAL-KFT-LAGH-----TK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
T+SGH ++ V + ++ +L ++ S DKT+++W S G C TLK H+ V
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYVFCCN 136
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ + V+ S D + +D+ +G CL + A +D P ++ F+ DG ++ + +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSD--P--VSAVHFNRDGSLIVSSSY 191
Query: 378 EALVKIWDVKS-QANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435
+ L +IWD S Q D V+ + FS NG Y+ A D +KLWD K K ++
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 436 FESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
+ +E +F +G ++ S D VY
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Score = 203 (76.5 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ +S D ++ + D ++D SG+ + TL GHS V F + +L ++GS D+
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+VR+W + G C TL H+ V AV + V++S D +D +SG CL
Sbjct: 152 SVRIWD-VKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
+ D D P + F P+G + T + +K+WD + + GH I
Sbjct: 209 LID--DDNPPVSFVK--FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 406 SFS-ENGYYLATAAHDG-VKLWDLR 428
+FS G ++ + + D V +W+L+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQ 289
Score = 199 (75.1 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++I +G D + ++D +G+ + TL HS V++V F +G L ++ S D R+W +
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-T 200
Query: 296 EDGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
G C TL D V V KY + A+LDNT +D S G CL T
Sbjct: 201 ASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY----TG 254
Query: 355 GRPEGYTSAA-FH-PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV--TAISFSEN 410
+ E Y A F G + +G+ + LV IW+++++ V K GH V TA +EN
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 314
Query: 411 GYYLATAAHDG-VKLW 425
A +D +KLW
Sbjct: 315 IIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 282 (104.3 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 72/270 (26%), Positives = 134/270 (49%)
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
+P+ + TL+GH+K V+SVKF G+ + SADK +++W G+ DG ++ T+ H
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKL 88
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+ V + + V+AS D T +D+SSG CL + G F+P +
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNL 143
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKL 430
+ +G+ + V+IWDVK+ + H V+A+ F+ +G + ++++DG+ ++WD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGT 488
+ ++ D+ P + V F +G Y+ A+ D ++++ + K C+KT+
Sbjct: 204 QCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYTGHKNE 258
Query: 489 GKATCVKFG-PDAKYIAVGSMDRNLRVFGL 517
F K+I GS D + ++ L
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 219 (82.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 73/273 (26%), Positives = 129/273 (47%)
Query: 198 PPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQI 257
P + P AL ++T LA H +K + S+ + + +A+ D ++ G+
Sbjct: 28 PTPVKPNYAL-KFT-LAGH-----TK-AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
T+SGH ++ V + ++ +L ++ S DKT+++W S G C TLK H+ V
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS-GK--CLKTLKGHSNYVFCCN 136
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ + V+ S D + +D+ +G CL + A +D P ++ F+ DG ++ + +
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSD--P--VSAVHFNRDGSLIVSSSY 191
Query: 378 EALVKIWDVKS-QANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435
+ L +IWD S Q D V+ + FS NG Y+ A D +KLWD K K ++
Sbjct: 192 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 251
Query: 436 FESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
+ +E +F +G ++ S D VY
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Score = 203 (76.5 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ +S D ++ + D ++D SG+ + TL GHS V F + +L ++GS D+
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+VR+W + G C TL H+ V AV + V++S D +D +SG CL
Sbjct: 152 SVRIWD-VKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
+ D D P + F P+G + T + +K+WD + + GH I
Sbjct: 209 LID--DDNPPVSFVK--FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 264
Query: 406 SFS-ENGYYLATAAHDG-VKLWDLR 428
+FS G ++ + + D V +W+L+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQ 289
Score = 199 (75.1 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++I +G D + ++D +G+ + TL HS V++V F +G L ++ S D R+W +
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-T 200
Query: 296 EDGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
G C TL D V V KY + A+LDNT +D S G CL T
Sbjct: 201 ASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY----TG 254
Query: 355 GRPEGYTSAA-FH-PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV--TAISFSEN 410
+ E Y A F G + +G+ + LV IW+++++ V K GH V TA +EN
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 314
Query: 411 GYYLATAAHDG-VKLW 425
A +D +KLW
Sbjct: 315 IIASAALENDKTIKLW 330
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 281 (104.0 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 71/270 (26%), Positives = 134/270 (49%)
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
+P+ + TL+GHS ++SVKF G+ + +AD + +W G+ DGN CK TL H+
Sbjct: 26 KPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIW-GAYDGN--CKKTLYGHSL 82
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
E+ V + + V+AS D T +D+ SG CL + G + F+P +
Sbjct: 83 EISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLK-----GHSDFVFCCDFNPPSNL 137
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKL 430
+ +G+ + VKIW+VK+ + H ++A++F+ NG + + ++DG+ ++WD
Sbjct: 138 IVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASG 197
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGT 488
+ R+ + + P + V F +G Y+ A+ D ++++ + + C+KT+
Sbjct: 198 QCLRTL-ADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGR----CLKTYTGHKNE 252
Query: 489 GKATCVKFGPDA-KYIAVGSMDRNLRVFGL 517
F K++ GS D + ++ L
Sbjct: 253 KYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
Score = 209 (78.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 62/233 (26%), Positives = 111/233 (47%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+A+ D +++ G TL GHS +++ V + ++ ++ S DKT++VW
Sbjct: 54 LASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWD-MRS 112
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G C TLK H+ V + + V+ S D + +++ +G CL +S A +D P
Sbjct: 113 GK--CLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLS-AHSD--P 167
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKS-QANVAKFDGHVGAVTAISFSENGYYLAT 416
++ F+ +G ++ +G+ + L +IWD S Q D V+ + FS NG Y+ T
Sbjct: 168 --ISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILT 225
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSG-SYLAVASADIRVY 467
A D +KLWD + + +++ +E F +G ++ S D VY
Sbjct: 226 ATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVY 278
Score = 207 (77.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 57/202 (28%), Positives = 98/202 (48%)
Query: 230 DIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTV 289
D + ++I +G D + +++ +G+ + TLS HS +++V F G L ++GS D
Sbjct: 130 DFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLC 189
Query: 290 RVWQGSEDGNYDCKHTLKDH-TAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
R+W + C TL D V V KY +TA+LDNT +D S G CL
Sbjct: 190 RIWDAASG---QCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 246
Query: 349 SDAGTDGRPEGYTS-AAFHPDGLI-LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
T + E Y A+F G + +G+ + +V IW+++++ V + GH V + +
Sbjct: 247 ----TGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAA 302
Query: 407 FSENGYYLATAAHDG---VKLW 425
+A+AA + +K+W
Sbjct: 303 CHPTKNIIASAALENDKTIKVW 324
Score = 203 (76.5 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 56/205 (27%), Positives = 97/205 (47%)
Query: 230 DIHYSKDV--IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ +S D + + D ++D SG+ + TL GHS V F +L ++GS D+
Sbjct: 86 DVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDE 145
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+V++W+ + G C TL H+ + AV + V+ S D +D +SG CL
Sbjct: 146 SVKIWE-VKTGK--CLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRT 202
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
++D G P + F P+G + T T + +K+WD + + GH +
Sbjct: 203 LADEGNP--PVSFVK--FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFA 258
Query: 406 SFSENGY-YLATAAHDG-VKLWDLR 428
SFS G ++ + + D V +W+L+
Sbjct: 259 SFSVTGRKWVVSGSEDNMVYIWNLQ 283
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 45/169 (26%), Positives = 76/169 (44%)
Query: 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKK-VTSVKFVTEGDLF 280
S P I +++ + + +I +G D ++D SGQ + TL+ V+ VKF G
Sbjct: 165 SDP-ISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYI 223
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAV--TVHATN-KYFVTASLDNTWCFY 337
LT + D T+++W S G C T H E + + T K+ V+ S DN +
Sbjct: 224 LTATLDNTLKLWDYSR-GR--CLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW 280
Query: 338 DLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE--ALVKIW 384
+L + + ++ G + SAA HP I+ + E +K+W
Sbjct: 281 NLQTKEIVQRLQ-----GHTDVVISAACHPTKNIIASAALENDKTIKVW 324
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 280 (103.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 72/270 (26%), Positives = 134/270 (49%)
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
+P+ + TL+GH+K V+SVKF G+ + SADK +++W G+ DG ++ T+ H
Sbjct: 32 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKL 88
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+ V + + V+AS D T +D+SSG CL + G F+P +
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNL 143
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKL 430
+ +G+ + V+IWDVK+ + H V+A+ F+ +G + ++++DG+ ++WD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 203
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGT 488
+ ++ D+ P + V F +G Y+ A+ D ++++ + K C+KT+
Sbjct: 204 QCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYTCHKNE 258
Query: 489 GKATCVKFG-PDAKYIAVGSMDRNLRVFGL 517
F K+I GS D + ++ L
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 217 (81.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 63/233 (27%), Positives = 111/233 (47%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+A+ D ++ G+ T+SGH ++ V + ++ +L ++ S DKT+++W S
Sbjct: 60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS- 118
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G C TLK H+ V + + V+ S D + +D+ +G CL + A +D P
Sbjct: 119 GK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSD--P 173
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKS-QANVAKFDGHVGAVTAISFSENGYYLAT 416
++ F+ DG ++ + + + L +IWD S Q D V+ + FS NG Y+
Sbjct: 174 --VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
A D +KLWD K K +++ +E +F +G ++ S D VY
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Score = 197 (74.4 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++I +G D + ++D +G+ + TL HS V++V F +G L ++ S D R+W +
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-T 200
Query: 296 EDGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
G C TL D V V KY + A+LDNT +D S G CL T
Sbjct: 201 ASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY----TC 254
Query: 355 GRPEGYTSAA-FH-PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV--TAISFSEN 410
+ E Y A F G + +G+ + LV IW+++++ V K GH V TA +EN
Sbjct: 255 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTEN 314
Query: 411 GYYLATAAHDG-VKLW 425
A +D +KLW
Sbjct: 315 IIASAALENDKTIKLW 330
Score = 194 (73.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/205 (27%), Positives = 96/205 (46%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ +S D ++ + D ++D SG+ + TL GHS V F + +L ++GS D+
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+VR+W + G C TL H+ V AV + V++S D +D +SG CL
Sbjct: 152 SVRIWD-VKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
+ D D P + F P+G + T + +K+WD + + H I
Sbjct: 209 LID--DDNPPVSFVK--FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFA 264
Query: 406 SFS-ENGYYLATAAHDG-VKLWDLR 428
+FS G ++ + + D V +W+L+
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQ 289
>SGD|S000003959 [details] [associations]
symbol:PRP19 "Splicing factor associated with the
spliceosome" species:4932 "Saccharomyces cerevisiae" [GO:0000974
"Prp19 complex" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0000384 "first spliceosomal transesterification
activity" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IMP;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0071006 "U2-type catalytic step 1 spliceosome" evidence=IDA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IMP] InterPro:IPR017986
InterPro:IPR003613 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00504 SGD:S000003959 GO:GO:0005739
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006281
EMBL:BK006945 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0000349 GO:GO:0000974 GO:GO:0071006
GeneTree:ENSGT00700000104487 eggNOG:NOG319177 KO:K10599
OrthoDB:EOG4M0JB3 InterPro:IPR013915 Pfam:PF08606 EMBL:L09721
EMBL:X99770 EMBL:Z73142 PIR:S64787 RefSeq:NP_013064.1 PDB:1N87
PDB:2BAY PDB:3LRV PDBsum:1N87 PDBsum:2BAY PDBsum:3LRV
ProteinModelPortal:P32523 SMR:P32523 DIP:DIP-1112N IntAct:P32523
MINT:MINT-632220 STRING:P32523 PaxDb:P32523 PeptideAtlas:P32523
EnsemblFungi:YLL036C GeneID:850623 KEGG:sce:YLL036C CYGD:YLL036c
HOGENOM:HOG000115709 OMA:YLYSHEN ChEMBL:CHEMBL5058
EvolutionaryTrace:P32523 NextBio:966526 ArrayExpress:P32523
Genevestigator:P32523 GermOnline:YLL036C Uniprot:P32523
Length = 503
Score = 244 (91.0 bits), Expect = 9.3e-24, Sum P(2) = 9.3e-24
Identities = 57/143 (39%), Positives = 83/143 (58%)
Query: 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTG---- 56
M C+ISG+VP PV+S S +FEK L+E+++ D G P+T EPL++++IV I
Sbjct: 1 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEIVPSAQQA 60
Query: 57 ---KIVKPRPLTAA-SIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAAC 112
+ L A SIP +L QNEWD +ML NF L L + ++LS +Y+ DAA
Sbjct: 61 SLTESTNSATLKANYSIPNLLTSLQNEWDAIMLENFKLRSTLDSLTKKLSTVMYERDAAK 120
Query: 113 RVIARLKKERDEARSLLAQSERQ 135
V A+L E++E L +S +Q
Sbjct: 121 LVAAQLLMEKNEDSKDLPKSSQQ 143
Score = 100 (40.3 bits), Expect = 9.3e-24, Sum P(2) = 9.3e-24
Identities = 29/126 (23%), Positives = 61/126 (48%)
Query: 360 YTSAAFHPDGLILGTGTSEALVKIWDVKS--QANVAKFDGHVGA-VTAISFSENGYYLAT 416
Y+S H D L+L + + ++ ++++ S QA+ ++F A + + F++NGY++
Sbjct: 333 YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYWMVV 391
Query: 417 AAHDGVKLWDLRK---LKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD---IRVYQVA 470
V +DLRK + ++ + +T T + D D SG + S + + +Y+
Sbjct: 392 ECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 451
Query: 471 SVKADW 476
+W
Sbjct: 452 KKTKNW 457
Score = 40 (19.1 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 308 DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGI 343
D A+++ V A N Y++ D T +DL +
Sbjct: 372 DEEAKIKEVKF-ADNGYWMVVECDQTVVCFDLRKDV 406
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 273 (101.2 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 83/298 (27%), Positives = 137/298 (45%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDL 279
K + + +D ++ +A+G +D+ +++ +GH VT V F G L
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 106
Query: 280 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDL 339
+GS DKTVR+W + G + HTA V++V + + FVTAS D T +
Sbjct: 107 LASGSRDKTVRIWVPNIKGE---STVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWST 163
Query: 340 SSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV 399
L +S A F PDG ++ + + + VK+WD S+ V + H
Sbjct: 164 HRQKFLFSLSQ-----HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 218
Query: 400 GAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLA 458
G VT + F +G +A A D VK+WD+R + + ++ + N++ F SG+YL
Sbjct: 219 GFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV--NALSFHPSGNYLV 276
Query: 459 VASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
AS+D + ++ + + + T L G G AT V F +Y A G D + V+
Sbjct: 277 TASSDSTL-KILDLM-EGRLLYT---LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 63/259 (24%), Positives = 94/259 (36%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH VT V F +GS D + VW + H V V +
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSR---AYRFTGHKDAVTCVNFSPSG 104
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFH--PDGLILGTGTSEAL 380
+ S D T I + + T R T + H DG T + +
Sbjct: 105 HLLASGSRDKT-------VRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 157
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF-ES 438
+K+W Q + H+ V FS +G + +A+ D VKLWD + S+ E
Sbjct: 158 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 217
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
T VDF SG+ +A A D V +V V+ ++ + S A + F P
Sbjct: 218 GGFVT---YVDFHPSGTCVAAAGMDNTV-KVWDVRTH-RLLQHYQLHSAAVNA--LSFHP 270
Query: 499 DAKYIAVGSMDRNLRVFGL 517
Y+ S D L++ L
Sbjct: 271 SGNYLVTASSDSTLKILDL 289
Score = 116 (45.9 bits), Expect = 0.00087, P = 0.00087
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 200 ALAPIDALERYTQLASHPL---HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ 256
A A +D + + +H L ++ + +L H S + + T D+ + D G+
Sbjct: 234 AAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGR 293
Query: 257 IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
++ TL GH T+V F G+ F +G +D+ V VW+ + D
Sbjct: 294 LLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFD 334
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 282 (104.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 70/239 (29%), Positives = 120/239 (50%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
IV L + ++ATG +DT A L+D SG+ V TL+GHS ++ S+ F T G+ +TGS
Sbjct: 180 IVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSF 239
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D TV VW+ ++ G +TL H AE+ + + +T S+D T +D +G C+
Sbjct: 240 DHTVTVWE-ADTGRK--VYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCV 296
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
++ G + + F G ++ T +++ +I+ ++ V K +GH G ++ I
Sbjct: 297 ATLT-----GHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKI 351
Query: 406 SFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
SF+ G L T + D ++WD + + + E E S F++ G + S D
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEI--FSCAFNYKGDIIITGSKD 408
Score = 272 (100.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 80/295 (27%), Positives = 136/295 (46%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE-GDLFLTGS 284
+ ++ ++ S TG D L+D SG+ + TL GH V ++ F GD TGS
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGS 154
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
DKT ++W E G C HT + HTAE+ ++ + + T S+D T +D+ SG
Sbjct: 155 FDKTCKLWS-VETGK--CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEE 211
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTA 404
+ ++ G S +F+ G + TG+ + V +W+ + V GH +++
Sbjct: 212 VFTLT-----GHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISS 266
Query: 405 ISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
F+ + + T + D KLWD K + D E + FD++G +A ASAD
Sbjct: 267 AVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSC--FDYTGKLIATASAD 324
Query: 464 --IRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
R++ A+ + C+ L G G+ + + F P + GS D+ R++
Sbjct: 325 GTARIFSAATRE----CVTK---LEGHEGEISKISFNPQGNRLLTGSSDKTARIW 372
Score = 212 (79.7 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 68/282 (24%), Positives = 123/282 (43%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
D IATG D L+ +G+ T GH+ ++ + F + L TGS D T ++W
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD-I 206
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
+ G TL H+AE+ +++ + + +T S D+T ++ +G + + G
Sbjct: 207 QSGEE--VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLI-----G 259
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA 415
+SA F+ D ++ TG+ + K+WD + VA GH + F G +A
Sbjct: 260 HCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIA 319
Query: 416 TAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKA 474
TA+ DG +++ + E + E + + F+ G+ L S+D + ++ +
Sbjct: 320 TASADGTARIFSAATRECVTKLEGHEGEI--SKISFNPQGNRLLTGSSD-KTARIWDAQT 376
Query: 475 DWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
C++ L G T + F I GS D R++
Sbjct: 377 G-QCLQV---LEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 186 (70.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 63/261 (24%), Positives = 107/261 (40%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L H +T+V G F+TGS D+T ++W + HTL+ H V A+ +
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEEL---HTLEGHRNVVYAIAFN- 143
Query: 321 TNKY---FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
N Y T S D T + + +G C G +F+P ++ TG+
Sbjct: 144 -NPYGDKIATGSFDKTCKLWSVETGKCYHTFR-----GHTAEIVCLSFNPQSTLVATGSM 197
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ K+WD++S V GH + ++SF+ +G + T + D V +W+ + +
Sbjct: 198 DTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTL 257
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCV 494
+E +S F+ S + S D +++ + K C+ T +C
Sbjct: 258 IGHCAEI--SSAVFNWDCSLILTGSMDKTCKLWDAVNGK----CVATLTGHDDEILDSC- 310
Query: 495 KFGPDAKYIAVGSMDRNLRVF 515
F K IA S D R+F
Sbjct: 311 -FDYTGKLIATASADGTARIF 330
Score = 118 (46.6 bits), Expect = 0.00065, P = 0.00065
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293
+ TG D A ++D +GQ + L GH+ ++ S F +GD+ +TGS D T R+W+
Sbjct: 360 LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 266 (98.7 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 84/301 (27%), Positives = 135/301 (44%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDL 279
K + + +D + +A+G +D+ +++ +GH VT V F G L
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 280 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WCF 336
+GS DKTVR+W + G + HTA V++V + + VTAS D T W
Sbjct: 76 LASGSRDKTVRIWVPNVKGE---STVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWST 132
Query: 337 YDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD 396
+ LTQ A F PDG ++ + + + VK+WD S+ V +
Sbjct: 133 HRQRFLFSLTQ--------HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC 184
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
H G VT + F +G +A A D VK+WD R + + ++ + N++ F SG+
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAV--NALSFHPSGN 242
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRV 514
YL AS+D + ++ + + + T L G G AT V F +Y A G D + V
Sbjct: 243 YLITASSDSTL-KILDLM-EGRLLYT---LHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 515 F 515
+
Sbjct: 298 W 298
Score = 154 (59.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 65/259 (25%), Positives = 96/259 (37%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH VT V F +GS D T+ +W + H V V +
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSR---AYRFTGHKDAVTCVNFSPSG 73
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFH--PDGLILGTGTSEAL 380
+ S D T I + V T R T + H DG +L T + +
Sbjct: 74 HLLASGSRDKT-------VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKT 126
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF-ES 438
VK+W Q + H+ V FS +G + +A+ D VKLWD + S+ E
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
T VDF SG+ +A A D V +V + ++ + S A + F P
Sbjct: 187 GGFVT---YVDFHPSGTCIAAAGMDNTV-KVWDTRTH-RLVQHYQLHSAAVNA--LSFHP 239
Query: 499 DAKYIAVGSMDRNLRVFGL 517
Y+ S D L++ L
Sbjct: 240 SGNYLITASSDSTLKILDL 258
Score = 115 (45.5 bits), Expect = 0.00090, P = 0.00090
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 209 RYTQLASH-PLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKK 267
R +L H LH + + +L H S + + T D+ + D G+++ TL GH
Sbjct: 217 RTHRLVQHYQLHSAA---VNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGP 273
Query: 268 VTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
T+V F G+ F +G +D+ V VW+ + D
Sbjct: 274 ATTVAFSRTGEYFASGGSDEQVMVWKSNFD 303
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 264 (98.0 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 84/295 (28%), Positives = 132/295 (44%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLT 282
+ I S+D +K +A+G +D+ ++ L GH V V+F G L +
Sbjct: 20 RDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVAS 79
Query: 283 GSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG 342
GS DKTV +W S G K HTA V++V + + VTAS D T + +
Sbjct: 80 GSRDKTVCLWVPSVKGE---STVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQ 136
Query: 343 ICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV 402
L +S A F PDG ++ + + + VK+WD S+ + F H G
Sbjct: 137 KFLFSLSQ-----HINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFA 191
Query: 403 TAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVAS 461
+ F +G +A A D VK+WD+R + + ++ + NS+ F SG+YL AS
Sbjct: 192 NHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAV--NSLSFHPSGNYLITAS 249
Query: 462 ADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
D + ++ + + + T L G G ATCV F + A G D + V+
Sbjct: 250 NDSTL-KILDL-LEGRLLYT---LHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 226 (84.6 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 70/266 (26%), Positives = 120/266 (45%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPS--GQIVTTLSGHSKKVTSVKFVTEGDLF 280
K ++ + S ++A+G D L+ PS G+ T H+ V SV F ++G
Sbjct: 62 KDAVMCVQFSPSGHLVASGSRDKTVCLWV-PSVKGES-TVFKAHTATVRSVHFSSDGQSL 119
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
+T S DKT++VW +L H V+ + +AS D T +D +
Sbjct: 120 VTASDDKTIKVWTVHRQ---KFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKT 176
Query: 341 SGICLTQVSDAGTDGRPEGYTS-AAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV 399
S C+ + G G+ + FHP G + ++ VK+WDV+ + + H
Sbjct: 177 SRECIHSFCEHG------GFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHT 230
Query: 400 GAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLA 458
AV ++SF +G YL TA++D +K+ DL L+ + + P V F +G + A
Sbjct: 231 AAVNSLSFHPSGNYLITASNDSTLKILDL--LEGRLLYTLHGHQGPATCVAFSRTGDFFA 288
Query: 459 VASAD--IRVYQVASVKADWN-CIKT 481
+D + V++ AD++ +KT
Sbjct: 289 SGGSDEQVMVWKTNFSAADYDGVLKT 314
Score = 182 (69.1 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 65/258 (25%), Positives = 101/258 (39%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH +TSV F +GS D +++W C L H V V +
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYC---LVGHKDAVMCVQFSPSG 74
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYT--SAAFHPDGLILGTGTSEAL 380
+ S D T C + + V T + T S F DG L T + +
Sbjct: 75 HLVASGSRDKTVCLW-------VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W V Q + H+ V FS +G +A+A+ D VKLWD + SF
Sbjct: 128 IKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSF--C 185
Query: 440 DSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPD 499
+ N V+F SG+ +A A D + +V V+ + ++ + T + F P
Sbjct: 186 EHGGFANHVEFHPSGTCIAAAGTD-KTVKVWDVRMN-RLLQHYQ--VHTAAVNSLSFHPS 241
Query: 500 AKYIAVGSMDRNLRVFGL 517
Y+ S D L++ L
Sbjct: 242 GNYLITASNDSTLKILDL 259
Score = 146 (56.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 56/231 (24%), Positives = 94/231 (40%)
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WCFYDLSSGICLTQVSDAG 352
ED + + +H + H + +V K + S+D+ W CL
Sbjct: 8 EDPSLE-RH-FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLV------ 59
Query: 353 TDGRPEGYTSAAFHPDGLILGTGTSEALVKIW--DVKSQANVAKFDGHVGAVTAISFSEN 410
G + F P G ++ +G+ + V +W VK ++ V F H V ++ FS +
Sbjct: 60 --GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTV--FKAHTATVRSVHFSSD 115
Query: 411 GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQV 469
G L TA+ D +K+W + + K F S F G +A AS D + ++
Sbjct: 116 GQSLVTASDDKTIKVWTVHRQKFL--FSLSQHINWVRCARFSPDGRLIASASDD-KTVKL 172
Query: 470 ASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN 520
K CI +F + G A V+F P IA D+ ++V+ + N
Sbjct: 173 WD-KTSRECIHSFCEHGGF--ANHVEFHPSGTCIAAAGTDKTVKVWDVRMN 220
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 275 (101.9 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 84/298 (28%), Positives = 137/298 (45%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDL 279
K + + S+D + +A+G +D+ +++ +GH VT V F G L
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHL 75
Query: 280 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDL 339
+GS DKTVR+W + G + HTA V++V + + FVTAS D T +
Sbjct: 76 LASGSRDKTVRIWVPNVKGE---STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 340 SSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV 399
L +S A F PDG ++ + + + VK+WD S+ V + H
Sbjct: 133 HRQKFLFSLSQ-----HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 400 GAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLA 458
G VT + F +G +A A D VK+WD+R + + ++ + N++ F SG+YL
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV--NALSFHPSGNYLV 245
Query: 459 VASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
AS+D + ++ + + + T L G G AT V F +Y A G D + V+
Sbjct: 246 TASSDSTL-KILDLM-EGRLLYT---LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 66/259 (25%), Positives = 95/259 (36%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH VTSV F +GS D + VW + H V V +
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTR---AYRFAGHKDAVTCVNFSPSG 73
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFH--PDGLILGTGTSEAL 380
+ S D T I + V T R T + H DG T + +
Sbjct: 74 HLLASGSRDKT-------VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF-ES 438
VK+W Q + H+ V FS +G + +A+ D VKLWD + S+ E
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
T VDF SG+ +A A D V +V V+ ++ + S A + F P
Sbjct: 187 GGFVT---YVDFHPSGTCIAAAGMDNTV-KVWDVRTH-RLLQHYQLHSAAVNA--LSFHP 239
Query: 499 DAKYIAVGSMDRNLRVFGL 517
Y+ S D L++ L
Sbjct: 240 SGNYLVTASSDSTLKILDL 258
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 278 (102.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 76/278 (27%), Positives = 137/278 (49%)
Query: 249 LFDRPSGQIVTTLSGHSKKVTSVKF-------VTEGDLFLTG-SADKTVRVWQGSEDGNY 300
L+ P ++ TL GH+ V ++ F + E D+ + +AD +V++W D
Sbjct: 242 LWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSD--- 298
Query: 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGY 360
+ ++ H+ V VT H + ++ T D++W +DL Q +G +G
Sbjct: 299 EPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLE-----VQEEILHQEGHSKGV 353
Query: 361 TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD 420
FHPDG + GTG ++ ++WD+++ V +GH+ + +I+FS NG+++AT + D
Sbjct: 354 HDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGD 413
Query: 421 GV-KLWDLRKLKNFRSFESSDSETPTNSVDFD-HSGSYLAVASADIRVYQVASVKADWNC 478
K+WDLR+ + + + + +SV F + G YL + D ++ + W+
Sbjct: 414 NACKVWDLRQRRCIYTIPAH--QNLVSSVKFQPNDGHYLLTGAYD-NTAKIWT-HPGWSP 469
Query: 479 IKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+KT L+G GK V PD + IA S DR +++
Sbjct: 470 LKT---LAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 175 (66.7 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 56/237 (23%), Positives = 102/237 (43%)
Query: 236 DV-IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294
DV +A+ D + L+ S + + + GHS +V V + G T D + R+W
Sbjct: 278 DVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWD- 336
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
+ + H + H+ V + H T LD+ +DL +G C+ + +
Sbjct: 337 -LEVQEEILHQ-EGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFL-----E 389
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSEN-GYY 413
G + S F P+G + TG+ + K+WD++ + + H V+++ F N G+Y
Sbjct: 390 GHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHY 449
Query: 414 LATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQV 469
L T A+D K+W ++ + + VD G +A S D R +++
Sbjct: 450 LLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVM--GVDLSPDGQLIATCSYD-RTFKL 503
Score = 169 (64.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/196 (28%), Positives = 79/196 (40%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
H S + T D + L+D + + GHSK V + F +G L TG D RV
Sbjct: 317 HPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARV 376
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
W G C L+ H E+ ++ + T S DN +DL C+ +
Sbjct: 377 WD-LRTGR--CVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIP-- 431
Query: 352 GTDGRPEGYTSAAFHP-DGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSEN 410
+S F P DG L TG + KIW + + GH G V + S +
Sbjct: 432 ---AHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPD 488
Query: 411 GYYLATAAHDGV-KLW 425
G +AT ++D KLW
Sbjct: 489 GQLIATCSYDRTFKLW 504
Score = 157 (60.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 47/169 (27%), Positives = 77/169 (45%)
Query: 218 LHKTS-KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE 276
LH+ G+ L H + TGG+D+ A ++D +G+ V L GH K++ S+ F
Sbjct: 344 LHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPN 403
Query: 277 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWC 335
G TGS D +VW + C +T+ H V +V + Y +T + DNT
Sbjct: 404 GFHVATGSGDNACKVWDLRQRR---CIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAK 460
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
+ L + AG +G+ G + PDG ++ T + + K+W
Sbjct: 461 IWTHPGWSPLKTL--AGHEGKVMGVDLS---PDGQLIATCSYDRTFKLW 504
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 257 (95.5 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 66/260 (25%), Positives = 121/260 (46%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K ++SVKF +G + SADKT+++W G+ DG ++ TL+ H + +
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIW-GAYDGKFE--RTLEGHKEGISDIAWS 97
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
+K +AS D T +D+ SG + + G E +F+P ++ +G+ +
Sbjct: 98 QDSKLICSASDDKTIKIWDVESGKMVKTLK-----GHKEYVFGVSFNPQSNLIVSGSFDE 152
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438
V+IWDV + H VT + F+ +G + + ++DG V++WD + + +
Sbjct: 153 NVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIST 212
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
D + + V F +G ++ + D ++ S + C+KT+ F
Sbjct: 213 EDGKE-VSFVKFSPNGKFVLAGTLD-NTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSV 270
Query: 499 DA-KYIAVGSMDRNLRVFGL 517
K+I GS D + ++ L
Sbjct: 271 TCGKWIVTGSEDNLIYIYNL 290
Score = 208 (78.3 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 63/229 (27%), Positives = 107/229 (46%)
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WCFYDLSSGICLTQVSDAGTDG 355
NY K+TLK H + +V K+ +AS D T W YD G + +G
Sbjct: 35 NYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYD---G-----KFERTLEG 86
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA 415
EG + A+ D ++ + + + +KIWDV+S V GH V +SF+ +
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIV 146
Query: 416 TAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASV 472
+ + D V++WD+ + + S+ S+ P V F+ G+ + S D +R++ +
Sbjct: 147 SGSFDENVRIWDVNTGECTKMI-SAHSD-PVTGVHFNRDGTLVVSGSYDGTVRIWDTTTG 204
Query: 473 KADWNCIKTFPDLSGTGK-ATCVKFGPDAKYIAVGSMDRNLRVFGLPGN 520
+ N I T D GK + VKF P+ K++ G++D LR++ N
Sbjct: 205 QL-LNTIST-ED----GKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNN 247
Score = 199 (75.1 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 81/347 (23%), Positives = 158/347 (45%)
Query: 179 AELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLD-IHYSKDV 237
A ++ ++ L Q+++++Q P E Q ++ L T K + S+ + +S D
Sbjct: 6 ASMSSSSSYLYQEQQQQQ------P-QQTESIPQTPNYILKYTLKGHLKSISSVKFSPDG 58
Query: 238 --IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
+A+ D ++ G+ TL GH + ++ + + + L + S DKT+++W
Sbjct: 59 KWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWD-V 117
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
E G K TLK H V V+ + + V+ S D +D+++G C +S A +D
Sbjct: 118 ESGKM-VK-TLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMIS-AHSD- 173
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENG-YY 413
P T F+ DG ++ +G+ + V+IWD + + G V+ + FS NG +
Sbjct: 174 -P--VTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFV 230
Query: 414 LATAAHDGVKLWDLRKLKN-FRSFESSDSETPTNSVDFDHS-GSYLAVASADIRVYQVAS 471
LA + ++LW K +++ +E F + G ++ S D +Y + +
Sbjct: 231 LAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIY-IYN 289
Query: 472 VKADWNCIKTFPDLSGTGKATC-VKFGPDAKYIAVGSM--DRNLRVF 515
++ ++T L+G V P IA G++ DR+++++
Sbjct: 290 LQTR-EIVQT---LAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 270 (100.1 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 84/298 (28%), Positives = 137/298 (45%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDL 279
K + I S+D + +A+G +D+ +++ +GH VT V F G L
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHL 75
Query: 280 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDL 339
+GS DKTVR+W + G + HTA V++V + + VTAS D T +
Sbjct: 76 LASGSRDKTVRIWIPNVKGE---STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 340 SSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV 399
L +S A F PDG ++ + + + VK+WD S+ V + H
Sbjct: 133 HRQKFLFSLSQ-----HINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 400 GAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLA 458
G VT + F +G +A A+ D VK+WD+R + + ++ + N++ F SG+YL
Sbjct: 188 GFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAV--NALSFHPSGNYLL 245
Query: 459 VASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
AS+D + ++ + + + T L G G AT V F +Y A G D + V+
Sbjct: 246 TASSDSTL-KILDLM-EGRLLYT---LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 158 (60.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 67/259 (25%), Positives = 97/259 (37%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH +TSV F +GS D + VW + H V V +
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSR---AYRFAGHKDAVTCVNFSPSG 73
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFH--PDGLILGTGTSEAL 380
+ S D T I + V T R T + H DG L T + +
Sbjct: 74 HLLASGSRDKT-------VRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF-ES 438
VK+W Q + H+ V FS +G + +A+ D VKLWD + S+ E
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
T VDF SG+ +A AS D V +V V+ ++ + S A + F P
Sbjct: 187 GGFVT---YVDFHPSGTCIAAASMDNTV-KVWDVRTH-RLLQHYQLHSAAVNA--LSFHP 239
Query: 499 DAKYIAVGSMDRNLRVFGL 517
Y+ S D L++ L
Sbjct: 240 SGNYLLTASSDSTLKILDL 258
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 200 ALAPIDALERYTQLASHPL---HKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ 256
A A +D + + +H L ++ + +L H S + + T D+ + D G+
Sbjct: 203 AAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGR 262
Query: 257 IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDH 309
++ TL GH T+V F G+ F +G +D+ V VW+ + D D + +K H
Sbjct: 263 LLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDV-VDYREVIKVH 314
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 269 (99.8 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 84/301 (27%), Positives = 136/301 (45%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDL 279
K + + +D + +A+G +D+ +++ +GH VT V F G L
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 280 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WCF 336
+GS DKTVR+W + G + HTA V++V + + FVTAS D T W
Sbjct: 76 LASGSRDKTVRIWVPNVKGE---STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 132
Query: 337 YDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD 396
+ L+Q A F PDG ++ + + + VK+WD S+ V +
Sbjct: 133 HRQKFLFSLSQ--------HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYC 184
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
H G VT + F +G +A A D VK+WD+R + + ++ + N + F SG+
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV--NGLSFHPSGN 242
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRV 514
YL AS+D + ++ + + + T L G G AT V F +Y A G D + V
Sbjct: 243 YLITASSDSTL-KILDLM-EGRLLYT---LHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 515 F 515
+
Sbjct: 298 W 298
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 64/259 (24%), Positives = 93/259 (35%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH VT V F +GS D + VW + H V V +
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSR---AYRFTGHKDAVTCVNFSPSG 73
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFH--PDGLILGTGTSEAL 380
+ S D T I + V T R T + H DG T + +
Sbjct: 74 HLLASGSRDKT-------VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF-ES 438
VK+W Q + H+ V FS +G + +A+ D VKLWD + S+ E
Sbjct: 127 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEH 186
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
T VDF SG+ +A A D V +V V+ ++ + S + F P
Sbjct: 187 GGFVT---YVDFHPSGTCIAAAGMDNTV-KVWDVRTH-RLLQHYQLHSAAVNG--LSFHP 239
Query: 499 DAKYIAVGSMDRNLRVFGL 517
Y+ S D L++ L
Sbjct: 240 SGNYLITASSDSTLKILDL 258
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 261 (96.9 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 67/274 (24%), Positives = 134/274 (48%)
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
+P+ + TL+GH+K V++VKF G+ + SADK +++W G+ DG ++ T+ H
Sbjct: 59 KPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKL 115
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+ V + ++ V+ S D T ++LS+G L + G F+P +
Sbjct: 116 GISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLK-----GHSNYVFCCNFNPQSNL 170
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKL 430
+ +G+ + V+IWDV++ + H V+A+ F+ +G + ++++DG+ ++WD
Sbjct: 171 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 230
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGT 488
+ ++ D+ P + V F +G Y+ A+ D ++++ + K C+KT+
Sbjct: 231 QCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSKGK----CLKTYTGHKNE 285
Query: 489 GKATCVKFG-PDAKYIAVGSMDRNLRVFGLPGND 521
F K+I GS D + ++ L +
Sbjct: 286 KYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKE 319
Score = 213 (80.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/233 (27%), Positives = 111/233 (47%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+A+ D ++ G+ T+SGH ++ V + ++ L ++GS DKT++VW+ S
Sbjct: 87 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTG 146
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
+ TLK H+ V + + V+ S D + +D+ +G CL + A +D P
Sbjct: 147 KSLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-AHSD--P 200
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKS-QANVAKFDGHVGAVTAISFSENGYYLAT 416
++ F+ DG ++ + + + L +IWD S Q D V+ + FS NG Y+
Sbjct: 201 --VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 258
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
A D +KLWD K K +++ +E +F +G ++ S D VY
Sbjct: 259 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVY 311
Score = 200 (75.5 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 56/205 (27%), Positives = 97/205 (47%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ +S D ++ +G D +++ +G+ + TL GHS V F + +L ++GS D+
Sbjct: 119 DVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 178
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+VR+W G C TL H+ V AV + V++S D +D +SG CL
Sbjct: 179 SVRIWD-VRTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 235
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
+ D D P + F P+G + T + +K+WD + + GH I
Sbjct: 236 LID--DDNPPVSFVK--FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 291
Query: 406 SFS-ENGYYLATAAHDG-VKLWDLR 428
+FS G ++ + + D V +W+L+
Sbjct: 292 NFSVTGGKWIVSGSEDNMVYIWNLQ 316
Score = 199 (75.1 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 62/196 (31%), Positives = 94/196 (47%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++I +G D + ++D +G+ + TL HS V++V F +G L ++ S D R+W +
Sbjct: 169 NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-T 227
Query: 296 EDGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
G C TL D V V KY + A+LDNT +D S G CL T
Sbjct: 228 ASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY----TG 281
Query: 355 GRPEGYTSAA-FH-PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV--TAISFSEN 410
+ E Y A F G + +G+ + +V IW+++S+ V K GH V TA +EN
Sbjct: 282 HKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTEN 341
Query: 411 GYYLATAAHDG-VKLW 425
A +D +KLW
Sbjct: 342 IIASAALENDKTIKLW 357
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 250 (93.1 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 80/293 (27%), Positives = 134/293 (45%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTT---LSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
KD + TGG+D ++D + L GH+ V SV ++G + S D T+ +
Sbjct: 52 KDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCL 111
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
W + G D KH L ++ V NKY ++ D Y + +G Q DA
Sbjct: 112 WD-ARSG--DKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKA-EQTLDA 167
Query: 352 GTDGRPEGYT-SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSEN 410
+G+ YT S A+ PDG + +G + ++ I+DV + V +GH V ++ FS N
Sbjct: 168 -QNGK---YTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPN 223
Query: 411 GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVY 467
L TA+ DG +KL+D+ + S V F G + A +S+D ++++
Sbjct: 224 SQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLC--VAFSEDGKHFASSSSDNSVKIW 281
Query: 468 QVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN 520
+ K C+ TF + T + V++ P +A S D++L ++ P N
Sbjct: 282 DTSERK----CLHTFAE--HTDQVWGVRYSPGNDKVASASEDKSLNIYYCPPN 328
Score = 172 (65.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 64/268 (23%), Positives = 115/268 (42%)
Query: 205 DALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGH 264
D E T H L K G+VS+ + IA+ +D+ L+D SG LS
Sbjct: 68 DLQEDNTLKLRHKL-KGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFG 126
Query: 265 SKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQ-AVTVHATNK 323
+ +V+F ++G D + ++ E G + TL + ++ K
Sbjct: 127 PVDLWTVQFSPCNKYVISGLNDGKISMYS-VETGK--AEQTLDAQNGKYTLSIAYSPDGK 183
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
Y + ++D +D+++G + + +G S F P+ +L T + + +K+
Sbjct: 184 YIASGAIDGIITIFDVAAGKVVQTL-----EGHAMPVRSLCFSPNSQLLLTASDDGHMKL 238
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF-ESSDS 441
+DV V GH V ++FSE+G + A+++ D VK+WD + K +F E +D
Sbjct: 239 YDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQ 298
Query: 442 ETPTNSVDFDHSGSYLAVASAD--IRVY 467
V + +A AS D + +Y
Sbjct: 299 VW---GVRYSPGNDKVASASEDKSLNIY 323
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 265 (98.3 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 83/301 (27%), Positives = 135/301 (44%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDL 279
K + + +D + +A+G +D+ +++ +GH VT V F G L
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 280 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WCF 336
+GS DKTVR+W + G + HTA V++V + + VTAS D T W
Sbjct: 76 LASGSRDKTVRIWVPNVKGE---STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 337 YDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD 396
+ LTQ A F PDG ++ + + + VK+WD S+ + +
Sbjct: 133 HRQRFLFSLTQ--------HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYC 184
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
H G VT + F +G +A A D VK+WD R + + ++ + N++ F SG+
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAV--NALSFHPSGN 242
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRV 514
YL AS+D + ++ + + + T L G G AT V F +Y A G D + V
Sbjct: 243 YLITASSDSTL-KILDLM-EGRLLYT---LHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 515 F 515
+
Sbjct: 298 W 298
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 65/259 (25%), Positives = 95/259 (36%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH VT V F +GS D T+ +W + H V V +
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSR---AYRFTGHKDAVTCVNFSPSG 73
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFH--PDGLILGTGTSEAL 380
+ S D T I + V T R T + H DG L T + +
Sbjct: 74 HLLASGSRDKT-------VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF-ES 438
VK+W Q + H+ V FS +G + +A+ D VKLWD + S+ E
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEH 186
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
T VDF SG+ +A A D V +V + ++ + S A + F P
Sbjct: 187 GGFVT---YVDFHPSGTCIAAAGMDNTV-KVWDARTH-RLLQHYQLHSAAVNA--LSFHP 239
Query: 499 DAKYIAVGSMDRNLRVFGL 517
Y+ S D L++ L
Sbjct: 240 SGNYLITASSDSTLKILDL 258
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 266 (98.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 57/150 (38%), Positives = 88/150 (58%)
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
TG+AD TV +W+ S+ L+ H A V V H + Y V+AS D TW +D+ +
Sbjct: 240 TGAADNTVCLWKASQSTPL---LRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHT 296
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
G+ L +G EG S A PDG ++ +G ++A+ +IWD++S ++ D H+
Sbjct: 297 GVELLM-----QEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQ 351
Query: 402 VTAISFSENGYYLATA-AHDGVKLWDLRKL 430
+ A+++S NGY LAT+ A D VK+WDLRK+
Sbjct: 352 IVAMAWSPNGYQLATSSADDTVKIWDLRKV 381
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 48/193 (24%), Positives = 86/193 (44%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+ATG D L+ + L GH +V V F GD ++ S D T R+W D
Sbjct: 238 LATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLW----D 293
Query: 298 GNYDCKHTLKD-HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
+ + +++ H+ + ++ + D +DL SG + + D
Sbjct: 294 VHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVL-----DEH 348
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGY--YL 414
+ A+ P+G L T +++ VKIWD++ + H V+ + + E+G ++
Sbjct: 349 IRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFI 408
Query: 415 ATAAHDG-VKLWD 426
AT+ +DG VKLW+
Sbjct: 409 ATSGYDGCVKLWN 421
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 272 (100.8 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 78/288 (27%), Positives = 146/288 (50%)
Query: 233 YSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+S D ++A+G D L+D +G+++ T GH + SV F +G + S D T++
Sbjct: 800 FSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIK 859
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
+W + + + TL H+ V++V K ++SLD+T ++ ++G L Q
Sbjct: 860 IWDLATG---ELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGE-LQQ--- 912
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSEN 410
+GR S AF PDG L +G+ + VK+W+ + + +GH +V +++FS +
Sbjct: 913 -SLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPD 971
Query: 411 GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVY 467
G LA+++ D +KLW+ + ++F+ D +V F G +L S D I+++
Sbjct: 972 GKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWI--RAVAFSPDGKHLVSGSDDNTIKLW 1029
Query: 468 QVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+A+ + ++ D S + A V F PD K +A S+D ++++
Sbjct: 1030 DLATSELQ----QSLEDHSRSVHA--VAFSPDDKQLASSSLDSTIKLW 1071
Score = 270 (100.1 bits), Expect = 8.6e-20, P = 8.6e-20
Identities = 78/281 (27%), Positives = 135/281 (48%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+ +G D ++D +G+++ TL GHS V S+ F +G L +GS D T+ +W S
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWD-SAT 823
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G + T + H + +V K +AS D+T +DL++G L Q D+ +
Sbjct: 824 G--ELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGE-LQQTLDSHS---- 876
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
+ S AF PDG +L + + ++ +K+W+ + +G G V +++FS +G LA+
Sbjct: 877 QSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASG 936
Query: 418 AHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADW 476
+ VKLW+ + ++ E SV F G LA +S+D + S +
Sbjct: 937 SEKNTVKLWNPATGELLQTLEGHSQSV--RSVAFSPDGKQLASSSSDTTIKLWNSTTGEL 994
Query: 477 NCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+TF +A V F PD K++ GS D ++++ L
Sbjct: 995 Q--QTFKGHDLWIRA--VAFSPDGKHLVSGSDDNTIKLWDL 1031
Score = 261 (96.9 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 94/371 (25%), Positives = 165/371 (44%)
Query: 156 APEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPP-----ALAPIDALERY 210
AP+ ++L A I EL + SQ + P A + +D+ +
Sbjct: 843 APDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKV 902
Query: 211 TQLASHPLHKT--SKPGIVSLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSK 266
A+ L ++ + G V + +S D +A+G L++ +G+++ TL GHS+
Sbjct: 903 WNPATGELQQSLEGRSGWVK-SVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQ 961
Query: 267 KVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV 326
V SV F +G + S+D T+++W S G + + T K H ++AV K+ V
Sbjct: 962 SVRSVAFSPDGKQLASSSSDTTIKLWN-STTG--ELQQTFKGHDLWIRAVAFSPDGKHLV 1018
Query: 327 TASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDV 386
+ S DNT +DL++ + D + AF PD L + + ++ +K+WD
Sbjct: 1019 SGSDDNTIKLWDLATSELQQSLED-----HSRSVHAVAFSPDDKQLASSSLDSTIKLWDS 1073
Query: 387 KSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPT 445
+ +GH V +++FS +G LA+ ++DG +KLW+ L +
Sbjct: 1074 ATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN--PLTGELQQTLTGRSDWV 1131
Query: 446 NSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIA 504
+SV F G LA D + S + ++T L G + + V F PD K +A
Sbjct: 1132 DSVAFSPDGKQLASGYYDSTIKLWDSATGE--LLQT---LEGHSDRIQSVVFSPDGKLLA 1186
Query: 505 VGSMDRNLRVF 515
GS D+ +++
Sbjct: 1187 SGSYDQTAKLW 1197
Score = 250 (93.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 73/282 (25%), Positives = 130/282 (46%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+A+ DT L++ +G++ T GH + +V F +G ++GS D T+++W +
Sbjct: 975 LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS 1034
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
+ + +L+DH+ V AV +K ++SLD+T +D ++G + +G
Sbjct: 1035 ---ELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTL-----EGHS 1086
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
+G S F PDG +L + + + +K+W+ + G V +++FS +G LA+
Sbjct: 1087 QGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASG 1146
Query: 418 AHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASV--KA 474
+D +KLWD + ++ E SV F G LA S D Q A + A
Sbjct: 1147 YYDSTIKLWDSATGELLQTLEGHSDRI--QSVVFSPDGKLLASGSYD----QTAKLWDPA 1200
Query: 475 DWNCIKTFPDLSGTGK-ATCVKFGPDAKYIAVGSMDRNLRVF 515
++ F G K V F PD K +A S ++++
Sbjct: 1201 TGELLQIF---EGHSKWVESVAFSPDGKLLASSSYGETIKLW 1239
Score = 238 (88.8 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 64/236 (27%), Positives = 118/236 (50%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+A+ +D+ L+D +G++ TL GHS+ V SV F +G L + S D T+++W
Sbjct: 1059 LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG 1118
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
+ + TL + V +V K + D+T +D ++G L + +G
Sbjct: 1119 ---ELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTL-----EGHS 1170
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
+ S F PDG +L +G+ + K+WD + + F+GH V +++FS +G LA++
Sbjct: 1171 DRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASS 1230
Query: 418 AH-DGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLA-VASADIRVYQVAS 471
++ + +KLWD + ++ +D + SV F G+ LA V D +++ A+
Sbjct: 1231 SYGETIKLWDPVTGELLQTL--NDPDESAGSVAFSPDGNRLASVDIFDTKIWDPAT 1284
Score = 237 (88.5 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 73/260 (28%), Positives = 119/260 (45%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL H V SV F +G ++GS D TV++W + + TL H+ V+++
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIW---DPATGELLQTLDGHSGTVESLAFS 801
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
K + S DNT +D ++G L +G P S AF PDG L + + ++
Sbjct: 802 PDGKLLASGSYDNTIDLWDSATGELLQTF-----EGHPHSIWSVAFAPDGKELASASDDS 856
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438
+KIWD+ + D H +V +++FS +G LA+++ D +K+W+ + +S E
Sbjct: 857 TIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEG 916
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCI--KTFPDLSGTGKAT-CVK 495
SV F G LA S + +VK WN + L G ++ V
Sbjct: 917 RSGWV--KSVAFSPDGKKLASGS------EKNTVKL-WNPATGELLQTLEGHSQSVRSVA 967
Query: 496 FGPDAKYIAVGSMDRNLRVF 515
F PD K +A S D ++++
Sbjct: 968 FSPDGKQLASSSSDTTIKLW 987
Score = 224 (83.9 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 73/265 (27%), Positives = 120/265 (45%)
Query: 242 GVDTNAV-LFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNY 300
G D N + L+D + ++ +L HS+ V +V F + + S D T+++W S G
Sbjct: 1020 GSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD-SATG-- 1076
Query: 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGY 360
+ + TL+ H+ V++VT K + S D T ++ +G ++ T GR +
Sbjct: 1077 ELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG----ELQQTLT-GRSDWV 1131
Query: 361 TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD 420
S AF PDG L +G ++ +K+WD + + +GH + ++ FS +G LA+ ++D
Sbjct: 1132 DSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYD 1191
Query: 421 GV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCI 479
KLWD + + FE SV F G LA +S + V +
Sbjct: 1192 QTAKLWDPATGELLQIFEGHSKWV--ESVAFSPDGKLLASSSYGETIKLWDPVTGELLQT 1249
Query: 480 KTFPDLSGTGKATCVKFGPDAKYIA 504
PD S A V F PD +A
Sbjct: 1250 LNDPDES----AGSVAFSPDGNRLA 1270
Score = 214 (80.4 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 64/216 (29%), Positives = 111/216 (51%)
Query: 303 KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362
+ TL++H V++V K V+ S D+T +D ++G L Q D G G E S
Sbjct: 743 QQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELL-QTLD-GHSGTVE---S 797
Query: 363 AAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG- 421
AF PDG +L +G+ + + +WD + + F+GH ++ +++F+ +G LA+A+ D
Sbjct: 798 LAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDST 857
Query: 422 VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCI 479
+K+WDL + ++ +S SV F G LA +S D I+V+ A+ +
Sbjct: 858 IKIWDLATGELQQTLDSHSQSV--RSVAFSPDGKLLASSSLDSTIKVWNPATGELQ---- 911
Query: 480 KTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ SG K+ V F PD K +A GS ++++
Sbjct: 912 QSLEGRSGWVKS--VAFSPDGKKLASGSEKNTVKLW 945
Score = 192 (72.6 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 58/230 (25%), Positives = 108/230 (46%)
Query: 200 ALAPIDALERYTQLASHPLHKTSK---PGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ 256
A + +D+ + A+ L +T + G+ S+ ++A+ D L++ +G+
Sbjct: 1060 ASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGE 1119
Query: 257 IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAV 316
+ TL+G S V SV F +G +G D T+++W S G + TL+ H+ +Q+V
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWD-SATG--ELLQTLEGHSDRIQSV 1176
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
K + S D T +D ++G L Q+ + G + S AF PDG +L + +
Sbjct: 1177 VFSPDGKLLASGSYDQTAKLWDPATGELL-QIFE----GHSKWVESVAFSPDGKLLASSS 1231
Query: 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWD 426
+K+WD + + + + +++FS +G LA+ K+WD
Sbjct: 1232 YGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTKIWD 1281
Score = 160 (61.4 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+A+G D+ L+D +G+++ TL GHS ++ SV F +G L +GS D+T ++W +
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLW---DP 1199
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
+ + H+ V++V K ++S T +D +G L ++D
Sbjct: 1200 ATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPD----- 1254
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGH 398
E S AF PDG L + KIWD + + GH
Sbjct: 1255 ESAGSVAFSPDGNRLAS-VDIFDTKIWDPATGELLQALKGH 1294
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 263 (97.6 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 90/302 (29%), Positives = 133/302 (44%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGD 278
K K I S D + IAT DT +L+ +P + + GH VTS++F +G+
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQGN 73
Query: 279 LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WC 335
L + S DKTVR+W G K HTA V++V A ++ VTAS D + W
Sbjct: 74 LLASASRDKTVRLWVLDRKGK---SSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWS 130
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKF 395
Y L + A F PDG ++ + + + +KIWD S+ V F
Sbjct: 131 MYRQRFLYSLYR--------HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
Query: 396 DGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSG 454
VG + FS NG +A+A D V++WD+R + + ++ N + F SG
Sbjct: 183 SDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGV--NCLSFHPSG 240
Query: 455 SYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLR 513
+ L AS+D V + V+ I T L G TG V F D + G D +
Sbjct: 241 NSLVTASSDGTVKILDLVEG--RLIYT---LQGHTGPVFTVSFSKDGELFTSGGADAQVL 295
Query: 514 VF 515
V+
Sbjct: 296 VW 297
Score = 155 (59.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 50/217 (23%), Positives = 86/217 (39%)
Query: 307 KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFH 366
K H A + + K TAS D + L + G + TS F
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-----GHKDVVTSLQFS 69
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P G +L + + + V++W + + ++F H V ++ FS +G +L TA+ D +K+W
Sbjct: 70 PQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVW 129
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
+ + + S F G + S D I+++ S + C+ F
Sbjct: 130 SMYRQRFLYSLYRHTHWV--RCAKFSPDGRLIVSCSEDKTIKIWDTTSKQ----CVNNFS 183
Query: 484 DLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN 520
D G A V F P+ IA D +R++ + N
Sbjct: 184 D--SVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMN 218
Score = 139 (54.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 57/258 (22%), Positives = 96/258 (37%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH +TS F T S D + +W + H V ++
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHAR---AYRYVGHKDVVTSLQFSPQG 72
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+AS D T + L + S+ P S F DG L T + + +K
Sbjct: 73 NLLASASRDKTVRLWVLDRK---GKSSEFKAHTAP--VRSVDFSADGQFLVTASEDKSIK 127
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+W + Q + H V FS +G + + + D +K+WD + +F SDS
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF--SDS 185
Query: 442 ETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPD 499
N VDF +G+ +A A +D +R++ + N + + G C+ F P
Sbjct: 186 VGFANFVDFSPNGTCIASAGSDHAVRIWDIRM-----NRLLQHYQVHSCG-VNCLSFHPS 239
Query: 500 AKYIAVGSMDRNLRVFGL 517
+ S D +++ L
Sbjct: 240 GNSLVTASSDGTVKILDL 257
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 209 RYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKV 268
R +L H ++ G+ L H S + + T D + D G+++ TL GH+ V
Sbjct: 216 RMNRLLQH--YQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPV 273
Query: 269 TSVKFVTEGDLFLTGSADKTVRVWQGS 295
+V F +G+LF +G AD V VW+ S
Sbjct: 274 FTVSFSKDGELFTSGGADAQVLVWRTS 300
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 265 (98.3 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 82/256 (32%), Positives = 125/256 (48%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
HS V+S+ + G L TG D V +W S+ +C +L HT+ V + +++
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKP---NCIMSLTGHTSAVGCIQFNSSE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V SL + +DL + L + G +S FHP G L +G+ ++ +K
Sbjct: 76 ERVVAGSLSGSLRLWDLEAAKILRTLM-----GHKASISSLDFHPMGEYLASGSVDSNIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WDV+ + V ++ GH AV ++FS +G +LA+A+ D VKLWDL K F S S
Sbjct: 131 LWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTS 190
Query: 442 ETPTNSVDFDHSGSYL-AVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDA 500
N V F H YL A SAD R ++ ++ +N I + TG V F PD
Sbjct: 191 AV--NVVQF-HPNEYLLASGSAD-RTVKLWDLEK-FNMIGSSE--GETGVVRSVLFNPDG 243
Query: 501 KYIAVGSMDRNLRVFG 516
+ GS + LRV+G
Sbjct: 244 SCLYSGS-ENTLRVYG 258
Score = 254 (94.5 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 68/234 (29%), Positives = 112/234 (47%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D ++ + +L+GH+ V ++F + + + GS ++R+W E
Sbjct: 35 LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H +Y + S+D+ +D+ C+ + G
Sbjct: 94 AAKI--LRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYK-----GH 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ AF PDG L + + ++ VK+WD+ + + +F H AV + F N Y LA+
Sbjct: 147 TQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLAS 206
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPT-NSVDFDHSGSYLAVASAD-IRVY 467
+ D VKLWDL K F SS+ ET SV F+ GS L S + +RVY
Sbjct: 207 GSADRTVKLWDLEK---FNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVY 257
Score = 216 (81.1 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 49/205 (23%), Positives = 100/205 (48%)
Query: 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF 280
TS G + + S++ + G + + L+D + +I+ TL GH ++S+ F G+
Sbjct: 63 TSAVGCIQFNS--SEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL 120
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
+GS D +++W G C K HT V+ + K+ +AS D+T +DL
Sbjct: 121 ASGSVDSNIKLWDVRRKG---CVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLI 177
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+G +T+ + FHP+ +L +G+++ VK+WD++ + +G G
Sbjct: 178 AGKMITEFTS-----HTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETG 232
Query: 401 AVTAISFSENGYYLATAAHDGVKLW 425
V ++ F+ +G L + + + ++++
Sbjct: 233 VVRSVLFNPDGSCLYSGSENTLRVY 257
Score = 167 (63.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 61/215 (28%), Positives = 93/215 (43%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H + +A+G VD+N L+D R G V GH++ V + F +G
Sbjct: 105 KASISSLDFHPMGEYLASGSVDSNIKLWDVRRKG-CVFRYKGHTQAVRCLAFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+ S D TV++W G + T HT+ V V H + S D T +DL
Sbjct: 164 SASDDSTVKLWDLIA-GKMITEFT--SHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEK 220
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDVKSQANVAKFDGHVG 400
+ + +G S F+PDG L +G+ L V W+ +V HVG
Sbjct: 221 ---FNMIGSS--EGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPDRCFDVV----HVG 271
Query: 401 --AVTAISFSENGYYLATAAHDGVKLW--DLRKLK 431
V+ ++ S N + +H V + DL ++K
Sbjct: 272 WGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRVK 306
Score = 157 (60.3 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 43/150 (28%), Positives = 68/150 (45%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V IW V + GH AV I F+ + + + G ++LWDL
Sbjct: 33 GRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + +S+DF G YLA S D + ++ V+ C+ F
Sbjct: 93 EAAKILRTLMGHKASI--SSLDFHPMGEYLASGSVDSNI-KLWDVRRK-GCV--FRYKGH 146
Query: 488 TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
T C+ F PD K++A S D ++++ L
Sbjct: 147 TQAVRCLAFSPDGKWLASASDDSTVKLWDL 176
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 359 GYTSAA----FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G+TSA F+ + G+ +++WD+++ + GH +++++ F G YL
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL 120
Query: 415 ATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD+R+ K F + F G +LA AS D ++VK
Sbjct: 121 ASGSVDSNIKLWDVRR-KGC-VFRYKGHTQAVRCLAFSPDGKWLASASDD------STVK 172
Query: 474 ADWNCI--KTFPDL-SGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
W+ I K + S T V+F P+ +A GS DR ++++ L
Sbjct: 173 L-WDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 261 (96.9 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 86/296 (29%), Positives = 134/296 (45%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGD 278
K K I SLD+ + +AT DT +L++ +P + + GH VTSV+F G+
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGN 73
Query: 279 LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WC 335
L + S D+TVR+W + G + K HTA V++V A ++ TAS D + W
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFS---EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWS 130
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKF 395
Y L + A F PDG ++ + + + +KIWD ++ V F
Sbjct: 131 MYRQRFLYSLYR--------HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 396 DGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSG 454
VG + F+ +G +A+A D VK+WD+R K + ++ N + F SG
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV--NCISFHPSG 240
Query: 455 SYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMD 509
+YL AS+D ++ + + I T L G TG V F + A G D
Sbjct: 241 NYLITASSD-GTLKILDL-LEGRLIYT---LQGHTGPVFTVSFSKGGELFASGGAD 291
Score = 209 (78.6 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 63/246 (25%), Positives = 106/246 (43%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLT 282
K + S+ +++A+ D L+ + H+ V SV F +G T
Sbjct: 60 KDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLAT 119
Query: 283 GSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG 342
S DK+++VW ++L HT V+ + V+ S D T +D ++
Sbjct: 120 ASEDKSIKVWSMYRQRFL---YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 343 ICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
C+ SD+ G+ + F+P G + + S+ VK+WDV+ + + H G
Sbjct: 177 QCVNNFSDS------VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 402 VTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVA 460
V ISF +G YL TA+ DG +K+ DL + + + + P +V F G A
Sbjct: 231 VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG--PVFTVSFSKGGELFASG 288
Query: 461 SADIRV 466
AD +V
Sbjct: 289 GADTQV 294
Score = 166 (63.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 63/256 (24%), Positives = 101/256 (39%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH +TS+ G T S D + +W + H V +V
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHAR---AYRYVGHKDVVTSVQFSPHG 72
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+AS D T + + S+ P S F DG L T + + +K
Sbjct: 73 NLLASASRDRTVRLWIPDKR---GKFSEFKAHTAP--VRSVDFSADGQFLATASEDKSIK 127
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+W + Q + H V FS +G + + + D +K+WD + +F SDS
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF--SDS 185
Query: 442 ETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAK 501
N VDF+ SG+ +A A +D V +V V+ + ++ + SG G C+ F P
Sbjct: 186 VGFANFVDFNPSGTCIASAGSDQTV-KVWDVRVN-KLLQHYQVHSG-G-VNCISFHPSGN 241
Query: 502 YIAVGSMDRNLRVFGL 517
Y+ S D L++ L
Sbjct: 242 YLITASSDGTLKILDL 257
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 49/217 (22%), Positives = 88/217 (40%)
Query: 307 KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFH 366
K H A + ++ + K TAS D ++ + G + TS F
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-----GHKDVVTSVQFS 69
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P G +L + + + V++W + ++F H V ++ FS +G +LATA+ D +K+W
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
+ + + S F G + S D I+++ + + C+ F
Sbjct: 130 SMYRQRFLYSLYRHTHWV--RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ----CVNNFS 183
Query: 484 DLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN 520
D G A V F P IA D+ ++V+ + N
Sbjct: 184 D--SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 395 FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453
F GH A+T++ S NG LATA+ D + LW+ + + R++ + SV F
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKP--HARAYRYVGHKDVVTSVQFSPH 71
Query: 454 GSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRN 511
G+ LA AS D +R++ + + ++ K T V F D +++A S D++
Sbjct: 72 GNLLASASRDRTVRLW-IPDKRGKFSEFKAH-----TAPVRSVDFSADGQFLATASEDKS 125
Query: 512 LRVFGL 517
++V+ +
Sbjct: 126 IKVWSM 131
Score = 119 (46.9 bits), Expect = 0.00062, P = 0.00062
Identities = 29/99 (29%), Positives = 47/99 (47%)
Query: 209 RYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKV 268
R +L H ++ G+ + H S + + T D + D G+++ TL GH+ V
Sbjct: 216 RVNKLLQH--YQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Query: 269 TSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK 307
+V F G+LF +G AD V +W+ + D CK K
Sbjct: 274 FTVSFSKGGELFASGGADTQVLLWRTNFD-ELHCKGLTK 311
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 224 (83.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 58/192 (30%), Positives = 92/192 (47%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
D + + N L++ G + T+ GHS V SV F +G L +GSA+KT+++W +
Sbjct: 126 DRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSA 185
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
G KHTL H+ V + + + S D T +D SG L +G
Sbjct: 186 TCG---LKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSG-SLKHT----LEG 237
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA 415
S AF P+G +L +G+S+A +K+WD + + GH V ++ FS + L
Sbjct: 238 HSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLE 297
Query: 416 TAAHDG-VKLWD 426
+ + D +KLWD
Sbjct: 298 SGSGDNTIKLWD 309
Score = 178 (67.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 41/117 (35%), Positives = 67/117 (57%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
L + +S D ++A+G D L+D PSG + TL GHS K+ S+ F G L +GS+D
Sbjct: 201 LPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSD 260
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W + G++ +HTLK H+ V +V ++ + S DNT +D ++GI
Sbjct: 261 ATIKLWD-TATGSF--RHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGI 314
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/223 (26%), Positives = 99/223 (44%)
Query: 254 SGQIVTTLSGHSKKVTSVKFVTEG--DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
SG TT+ + S+K EG D + + ++W + G+ KHT++ H+
Sbjct: 100 SGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAI-GSL--KHTIEGHSD 156
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
V +V + + S + T +D S C + + G F PDG +
Sbjct: 157 WVLSVAFSPDGQLLASGSAEKTIKLWD--SATCGLKHT---LGGHSNWVLPLVFSPDGRL 211
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKL 430
L +G+++A +K+WD S + +GH + +++FS NG LA+ + D +KLWD
Sbjct: 212 LASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTAT- 270
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471
+FR S+ SV F L S D I+++ A+
Sbjct: 271 GSFRHTLKGHSDMVL-SVVFSPDSQLLESGSGDNTIKLWDPAT 312
Score = 156 (60.0 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 45/165 (27%), Positives = 80/165 (48%)
Query: 354 DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYY 413
+G + S AF PDG +L +G++E +K+WD + GH V + FS +G
Sbjct: 152 EGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRL 211
Query: 414 LATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVA 470
LA+ ++D +KLWD + E ++ S+ F +G LA S+D I+++ A
Sbjct: 212 LASGSNDATIKLWDPPSGSLKHTLEGHSNKI--ESLAFSPNGQLLASGSSDATIKLWDTA 269
Query: 471 SVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ + +K D+ V F PD++ + GS D ++++
Sbjct: 270 TGSFR-HTLKGHSDM-----VLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 155 (59.6 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 33/88 (37%), Positives = 51/88 (57%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+ +S D ++A+G DT L+D SG + TL GHS V SV F G L +GS+D T
Sbjct: 47 VTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTT 106
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAV 316
+++W + D KHT++ H+ V++V
Sbjct: 107 IKLWNSASDS---LKHTMEGHSDRVESV 131
Score = 136 (52.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 354 DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYY 413
+G + + F PDG +L +G+++ +K+WD S +GH +V +++FS NG
Sbjct: 38 EGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQL 97
Query: 414 LATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASV 472
LA+ + D +KLW+ + E SV F +G A ++ + +
Sbjct: 98 LASGSSDTTIKLWNSASDSLKHTMEGHSDRV--ESVAFSPNGQLWNPAIGSLK-HTIEG- 153
Query: 473 KADWNCIKTF-PD--LSGTGKA 491
+DW F PD L +G A
Sbjct: 154 HSDWVLSVAFSPDGQLLASGSA 175
Score = 129 (50.5 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 36/115 (31%), Positives = 57/115 (49%)
Query: 255 GQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQ 314
G + TL GHS + +V F +G L +GS D T+++W + G K TL+ H++ VQ
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGG---LKQTLEGHSSSVQ 87
Query: 315 AVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG 369
+V + + S D T ++ +S L + +D R E S AF P+G
Sbjct: 88 SVAFSPNGQLLASGSSDTTIKLWNSASD-SLKHTMEGHSD-RVE---SVAFSPNG 137
Score = 77 (32.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF--LTGSADKTV 289
++A+G DT L++ S + T+ GHS +V SV F G L+ GS T+
Sbjct: 97 LLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTI 151
Score = 73 (30.8 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 34/138 (24%), Positives = 60/138 (43%)
Query: 382 KIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT-AAHDGVKLWDLRKLKNFRSFESSD 440
++W+ + +GH V +++FS +G LA+ +A +KLWD +
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATC-GLKHTLGGH 196
Query: 441 SETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFG 497
S V F G LA S D I+++ S +K L G + K + F
Sbjct: 197 SNWVLPLV-FSPDGRLLASGSNDATIKLWDPPS-----GSLKH--TLEGHSNKIESLAFS 248
Query: 498 PDAKYIAVGSMDRNLRVF 515
P+ + +A GS D ++++
Sbjct: 249 PNGQLLASGSSDATIKLW 266
Score = 46 (21.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 496 FGPDAKYIAVGSMDRNLRVFGLP 518
F PD + +A GS D ++++ P
Sbjct: 205 FSPDGRLLASGSNDATIKLWDPP 227
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 258 (95.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 81/292 (27%), Positives = 130/292 (44%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE-GDLFLTGS 284
+ ++ + S TG D ++D SG+ + TL GH V ++ F GD TGS
Sbjct: 95 LTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGS 154
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
DKT ++W +E G C +T + HTAE+ + + + T S+D T +D+ SG
Sbjct: 155 FDKTCKLWS-AETGK--CFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESG-- 209
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTA 404
+VS G S F+ G L TG+ + +WDV S V GH G ++
Sbjct: 210 -EEVSTLA--GHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISC 266
Query: 405 ISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
+ F+ + +ATA+ D K+WD + + + E V F+++G +A ASAD
Sbjct: 267 VQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVL--DVCFNYTGQLIATASAD 324
Query: 464 IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+V S + C+ G C F + S+D+ RV+
Sbjct: 325 -GTSRVFSTDT-FQCLCQLEGHKGEISKVC--FNAQGSRVLTASVDKTSRVW 372
Score = 234 (87.4 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 63/239 (26%), Positives = 109/239 (45%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
IV L + ++ATG +DT A L+D SG+ V+TL+GH ++ S+ F T GD +TGS
Sbjct: 180 IVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSF 239
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D T +W H L H E+ V + TASLD + +D G CL
Sbjct: 240 DHTAILWDVPSGRKV---HVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCL 296
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
+ G + F+ G ++ T +++ +++ + + + +GH G ++ +
Sbjct: 297 ATLL-----GHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKV 351
Query: 406 SFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
F+ G + TA+ D ++W ++ + E E S F++ G + S D
Sbjct: 352 CFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEI--FSCAFNYEGDTIITGSKD 408
Score = 222 (83.2 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 75/281 (26%), Positives = 123/281 (43%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
D +ATG D L+ +G+ T GH+ ++ + F + L TGS D T ++W
Sbjct: 148 DKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD-V 206
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
E G TL H AE+ ++ + T VT S D+T +D+ SG + +S G G
Sbjct: 207 ESGEE--VSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS--GHRG 262
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA 415
+ F+ D ++ T + + K+WD + +A GH V + F+ G +A
Sbjct: 263 E---ISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIA 319
Query: 416 TAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKA 474
TA+ DG +++ + E E + V F+ GS + AS D + +V VK
Sbjct: 320 TASADGTSRVFSTDTFQCLCQLEGHKGEI--SKVCFNAQGSRVLTASVD-KTSRVWCVKT 376
Query: 475 DWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
C++ S +C F + I GS D R++
Sbjct: 377 G-ACLQVLEGHSDE-IFSCA-FNYEGDTIITGSKDNTCRIW 414
Score = 216 (81.1 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 70/259 (27%), Positives = 106/259 (40%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L H +T+V F G F+TGS D+T ++W + HTL+ H V A+ +
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEEL---HTLEGHRNVVYAIAFN- 143
Query: 321 TNKY---FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
N Y T S D T + +G C G AF+P ++ TG+
Sbjct: 144 -NPYGDKVATGSFDKTCKLWSAETGKCFYTFR-----GHTAEIVCLAFNPQSTLVATGSM 197
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVK-LWDLRKLKNFRSF 436
+ K+WDV+S V+ GH + ++ F+ G L T + D LWD+ +
Sbjct: 198 DTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVL 257
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKF 496
E + V F+ S +A AS D + +V + C+ T L + V F
Sbjct: 258 SGHRGEI--SCVQFNWDCSLIATASLD-KSCKVWDAEGG-QCLATL--LGHNDEVLDVCF 311
Query: 497 GPDAKYIAVGSMDRNLRVF 515
+ IA S D RVF
Sbjct: 312 NYTGQLIATASADGTSRVF 330
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 54/216 (25%), Positives = 93/216 (43%)
Query: 306 LKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAF 365
L+ H + V + + F+T S D T +D +SG L + R Y A
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGH----RNVVYAIAFN 143
Query: 366 HPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KL 424
+P G + TG+ + K+W ++ F GH + ++F+ +AT + D KL
Sbjct: 144 NPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKL 203
Query: 425 WDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPD 484
WD+ + + +E S+ F+ +G L S D ++ D +
Sbjct: 204 WDVESGEEVSTLAGHFAEII--SLCFNTTGDRLVTGSFDH-----TAILWDVPSGRKVHV 256
Query: 485 LSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
LSG G+ +CV+F D IA S+D++ +V+ G
Sbjct: 257 LSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEG 292
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 254 (94.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 79/259 (30%), Positives = 120/259 (46%)
Query: 262 SGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHAT 321
+GH VT V F G L +GS DKTVR+W + G + HTA V++V +
Sbjct: 20 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---STVFRAHTATVRSVHFCSD 76
Query: 322 NKYFVTASLDNT---WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378
+ FVTAS D T W + L+Q A F PDG ++ + + +
Sbjct: 77 GQSFVTASDDKTVKVWATHRQKFLFSLSQ--------HINWVRCAKFSPDGRLIVSASDD 128
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
VK+WD S+ V + H G VT + F +G +A A D VK+WD+R + + ++
Sbjct: 129 KTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQ 188
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKF 496
+ N + F SG+YL AS+D + ++ + + + T L G G AT V F
Sbjct: 189 LHSAAV--NGLSFHPSGNYLITASSDSTL-KILDLM-EGRLLYT---LHGHQGPATTVAF 241
Query: 497 GPDAKYIAVGSMDRNLRVF 515
+Y A G D + V+
Sbjct: 242 SRTGEYFASGGSDEQVMVW 260
Score = 231 (86.4 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 69/247 (27%), Positives = 109/247 (44%)
Query: 223 KPGIVSLDIHYSKDVIATGGVD-TNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K + ++ S ++A+G D T + G+ T H+ V SV F ++G F+
Sbjct: 23 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES-TVFRAHTATVRSVHFCSDGQSFV 81
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
T S DKTV+VW +L H V+ + V+AS D T +D SS
Sbjct: 82 TASDDKTVKVWATHRQ---KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSS 138
Query: 342 GICLTQVSDAGTDGRPEGY-TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
C+ + G G+ T FHP G + + VK+WDV++ + + H
Sbjct: 139 RECVHSYCEHG------GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA 192
Query: 401 AVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAV 459
AV +SF +G YL TA+ D +K+ DL + + + P +V F +G Y A
Sbjct: 193 AVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQG--PATTVAFSRTGEYFAS 250
Query: 460 ASADIRV 466
+D +V
Sbjct: 251 GGSDEQV 257
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/139 (26%), Positives = 66/139 (47%)
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
++ + +W +K Q+ +F GH AVT ++FS +G+ LA+ + D V++W + +K +
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTV 60
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKF 496
+ + T SV F G AS D V A+ + + F C KF
Sbjct: 61 FRAHTAT-VRSVHFCSDGQSFVTASDDKTVKVWATHRQKF----LFSLSQHINWVRCAKF 115
Query: 497 GPDAKYIAVGSMDRNLRVF 515
PD + I S D+ ++++
Sbjct: 116 SPDGRLIVSASDDKTVKLW 134
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 43/158 (27%), Positives = 65/158 (41%)
Query: 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG 421
S F DG T + + VK+W Q + H+ V FS +G + +A+ D
Sbjct: 70 SVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDK 129
Query: 422 -VKLWDLRKLKNFRSF-ESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCI 479
VKLWD + S+ E T VDF SG+ +A A D V +V V+ +
Sbjct: 130 TVKLWDKSSRECVHSYCEHGGFVT---YVDFHPSGTCIAAAGMDNTV-KVWDVRTH-RLL 184
Query: 480 KTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+ + S + F P Y+ S D L++ L
Sbjct: 185 QHYQLHSAAVNG--LSFHPSGNYLITASSDSTLKILDL 220
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 239 (89.2 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 78/296 (26%), Positives = 141/296 (47%)
Query: 236 DVIATGGVDTNAVLF-----DRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
D++ +G D + +L+ D G L+GHS V+ + L+ S DKT+R
Sbjct: 29 DILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIR 88
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
+W E G +C H HT++V +V++ N+ V+ S D T +++ G C ++D
Sbjct: 89 LWD-LEKG--ECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNII-GNCKYTITD 144
Query: 351 AGTDGRPEGYTSAAF--HPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS 408
G + + F +PD L + + VK+WD+++ + GH G V+A++ S
Sbjct: 145 GG---HSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTIS 201
Query: 409 ENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVAS-ADIRV 466
+G A+ DG + LWDL + + S E+ + N++ F + +L A+ + IR+
Sbjct: 202 PDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN---INALVFSPNRYWLCAATGSSIRI 258
Query: 467 YQVASV-KADWNCIKTFPDLSGTGKAT----CVK--FGPDAKYIAVGSMDRNLRVF 515
+ + + K D + D G GK + C+ + PD + + G D +RV+
Sbjct: 259 FDLETQEKVDELTV----DFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVW 310
Score = 180 (68.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 73/274 (26%), Positives = 112/274 (40%)
Query: 260 TLSGHSKKVTSVKFVTEG-DLFLTGSADKTVRVWQ-GSEDGNYD-CKHTLKDHTAEVQAV 316
TL GHS VTS+ E D+ L+GS DK++ +W +D NY + L H+ V
Sbjct: 10 TLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDC 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + Y ++AS D T +DL G C Q G S + PD + +G+
Sbjct: 70 ALSFDSHYALSASWDKTIRLWDLEKGECTHQFV-----GHTSDVLSVSISPDNRQVVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFDG-HVGAVTAISFSENGYYLA--TAAHD-GVKLWDLRKLKN 432
+ +KIW++ DG H V+ + FS N L +A D VK+WDL +
Sbjct: 125 RDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDL---ET 181
Query: 433 FRSFESSDSETP-TNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKA 491
F S T ++V GS A D + + D N L
Sbjct: 182 FSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTL-----MLWDLNESTHLYSLEAKANI 236
Query: 492 TCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ F P+ +Y + ++R+F L + E
Sbjct: 237 NALVFSPN-RYWLCAATGSSIRIFDLETQEKVDE 269
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 268 (99.4 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 79/287 (27%), Positives = 138/287 (48%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
H S+ ++A+ D ++D +G + L GH+ V SV F + L +GS D+TVR+
Sbjct: 315 HDSR-LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRI 373
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
W+ + G +HT +DH V AV+ ++ +AS +D +G L V
Sbjct: 374 WE-TTTGLL--RHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTG-SLQNV--- 426
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411
+G + S +F PD +L + + + VKIW + + +GH V ++ FS +
Sbjct: 427 -LEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDS 485
Query: 412 YYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQ 468
+A+A+ D VK+WD + + ES D+ SV F H LA AS D ++++
Sbjct: 486 RLIASASDDMTVKIWDTATVPLQNNLESHDNWV--RSVVFSHDSRLLASASDDMTVKIWD 543
Query: 469 VASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
A+ + N ++ D + V F PD++ +A S D ++++
Sbjct: 544 TATGSLE-NTLEGHDD-----RVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 210 (79.0 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 73/294 (24%), Positives = 133/294 (45%)
Query: 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
G VS H S+ ++A+ D ++D + + TL GH++ V SV F + L + S
Sbjct: 267 GSVSFS-HDSR-LLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASAS 324
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
D TV++W + G + LK H V++V ++ + S D T ++ ++G+
Sbjct: 325 DDGTVKIWD-TATGTL--QRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLL 381
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTA 404
D + + +F D L + + VKIWD ++ + +GH V +
Sbjct: 382 RHTFED-----HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNS 436
Query: 405 ISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
+SFS + LA+A+ D VK+W R+ E + SV F H +A AS D
Sbjct: 437 VSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWV--RSVVFSHDSRLIASASDD 494
Query: 464 --IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++++ A+V N +++ + V F D++ +A S D ++++
Sbjct: 495 MTVKIWDTATVPLQ-NNLESHDNW-----VRSVVFSHDSRLLASASDDMTVKIW 542
Score = 209 (78.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 70/259 (27%), Positives = 119/259 (45%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH + V SV F + L + S D TV++W + ++TL+ H V++V +
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIW---DTATSFLQNTLEGHNEWVKSVVFSHDS 317
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ +AS D T +D ++G + G + S F D ++ +G+++ V+
Sbjct: 318 RLLASASDDGTVKIWDTATGTLQRMLK-----GHNDSVRSVVFSHDSRLIASGSNDRTVR 372
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR--KLKNFRSFESS 439
IW+ + F+ H +V A+SF+ + LA+A+ G VK+WD R L+N E
Sbjct: 373 IWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNV--LEGH 430
Query: 440 DSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGK-ATCVKF 496
D NSV F LA AS D ++++ A+ +T L G V F
Sbjct: 431 DD--CVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQ----RT---LEGHNDWVRSVVF 481
Query: 497 GPDAKYIAVGSMDRNLRVF 515
D++ IA S D ++++
Sbjct: 482 SHDSRLIASASDDMTVKIW 500
Score = 207 (77.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 64/230 (27%), Positives = 107/230 (46%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+ +S D ++A+ D ++ +G + TL GH+ V SV F + L + S D T
Sbjct: 437 VSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMT 496
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
V++W + ++ L+ H V++V ++ +AS D T +D ++G L
Sbjct: 497 VKIW---DTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATG-SLENT 552
Query: 349 SDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS 408
+ G D R S +F PD +L + + + VKIW + FDG +++FS
Sbjct: 553 LE-GHDDR---VNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFS 608
Query: 409 ENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457
LA+A DG VK+WD+ ++ + R D E + FD S S L
Sbjct: 609 HTSNLLASAMDDGTVKIWDM-EIYSLRHTFDLDHEI--QRIQFDKSMSSL 655
Score = 206 (77.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 65/257 (25%), Positives = 115/257 (44%)
Query: 208 ERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKK 267
E T L H + + ++++ + +A+ N ++D +G + L GH
Sbjct: 375 ETTTGLLRHTF-EDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDC 433
Query: 268 VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVT 327
V SV F + L + S D+TV++W + G+ + TL+ H V++V ++ +
Sbjct: 434 VNSVSFSPDSRLLASASDDRTVKIWHAAT-GSL--QRTLEGHNDWVRSVVFSHDSRLIAS 490
Query: 328 ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVK 387
AS D T +D ++ + L + S F D +L + + + VKIWD
Sbjct: 491 ASDDMTVKIWDTAT-VPLQN----NLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTA 545
Query: 388 SQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTN 446
+ + +GH V ++SFS + LA+A+ DG VK+W +F+ S
Sbjct: 546 TGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAI-- 603
Query: 447 SVDFDHSGSYLAVASAD 463
S+ F H+ + LA A D
Sbjct: 604 SLAFSHTSNLLASAMDD 620
Score = 178 (67.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 67/290 (23%), Positives = 125/290 (43%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
H S+ +IA+G D +++ +G + T H V +V F + + S V++
Sbjct: 357 HDSR-LIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKI 415
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
W + G+ ++ L+ H V +V+ ++ +AS D T + ++G L +
Sbjct: 416 WD-TRTGSL--QNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATG-SLQRT--- 468
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411
+G + S F D ++ + + + VKIWD + + H V ++ FS +
Sbjct: 469 -LEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDS 527
Query: 412 YYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQ 468
LA+A+ D VK+WD + E D NSV F LA AS D ++++
Sbjct: 528 RLLASASDDMTVKIWDTATGSLENTLEGHDDRV--NSVSFSPDSRLLASASDDGTVKIWY 585
Query: 469 VASVKADWNCIKTFPDLSGTGK-ATCVKFGPDAKYIAVGSMDRNLRVFGL 517
A+ TF G+G+ A + F + +A D ++++ +
Sbjct: 586 AATGTVQ----HTF---DGSGRVAISLAFSHTSNLLASAMDDGTVKIWDM 628
Score = 38 (18.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 12/56 (21%), Positives = 22/56 (39%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
D+ + D + +F R ++ TL + + +GD+FL D V
Sbjct: 90 DIFPSDLTDVHHTMFLRSLQEMSLTLQRNMYNLHHPGVSVDGDMFLLPEPDPLAAV 145
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 257 (95.5 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 80/267 (29%), Positives = 126/267 (47%)
Query: 200 ALAPID-ALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQI 257
A +P D LERY K K I S+D + +ATG DT +L+ RP +
Sbjct: 2 ASSPEDPVLERY--------FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARA 53
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
+ GH +TSV+F G+L + S D+T+R+W + G K HTA V++V
Sbjct: 54 FRYV-GHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGK---SSEFKAHTAPVRSVD 109
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
A ++ +AS D + +++ L + A F PDG ++ + +
Sbjct: 110 FSADGQFLASASEDKSIKVWNMYRQRFLYSLYR-----HTHWVRCAKFSPDGRLIVSCSE 164
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ +KIWD ++ V F VG ++F+ NG +A+A D VK+WD+R K + +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY 224
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASAD 463
+ N V F SG+YL AS+D
Sbjct: 225 QVHSGGV--NCVSFHPSGNYLITASSD 249
Score = 202 (76.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 56/205 (27%), Positives = 93/205 (45%)
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H+ V SV F +G + S DK+++VW ++L HT V+ +
Sbjct: 101 HTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFL---YSLYRHTHWVRCAKFSPDGR 157
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS-AAFHPDGLILGTGTSEALVK 382
V+ S D T +D ++ C+ SD G+ + AF+P+G + + S+ VK
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDF------VGFANFVAFNPNGTCIASAGSDHTVK 211
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
IWD++ + + H G V +SF +G YL TA+ DG +K+ DL + + + +
Sbjct: 212 IWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 271
Query: 442 ETPTNSVDFDHSGSYLAVASADIRV 466
P +V F G AD +V
Sbjct: 272 --PVFTVSFSKGGELFTSGGADAQV 294
Score = 193 (73.0 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 50/165 (30%), Positives = 79/165 (47%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G TS F P+G L TG+ + + +W ++ QA ++ GH +T++ FS G L
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLL 75
Query: 415 ATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+A+ D ++LW K F++ + P SVDF G +LA AS D S+K
Sbjct: 76 ASASRDRTIRLWIPDKRGKSSEFKAHTA--PVRSVDFSADGQFLASASED------KSIK 127
Query: 474 ADWNCIKT---FPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
WN + + T C KF PD + I S D+ ++++
Sbjct: 128 V-WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Score = 38 (18.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 154 KRAPEDEDLGPAGKKLHTG 172
K A D P GK+L TG
Sbjct: 18 KAAITSVDFSPNGKQLATG 36
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 255 (94.8 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 85/296 (28%), Positives = 133/296 (44%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGD 278
K K I SLD+ + +AT DT +L++ +P + + GH VTSV+F G+
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGN 73
Query: 279 LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WC 335
L + S D+TVR+W + G + K HTA V++V A ++ TAS D + W
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFS---EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWS 130
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKF 395
Y L + A F PDG ++ + + + +KIWD ++ V F
Sbjct: 131 MYRQRFLYSLYR--------HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 396 DGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSG 454
VG + F+ +G +A+A D VK+WD+R K + ++ N + F S
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV--NCISFHPSD 240
Query: 455 SYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMD 509
+YL AS+D ++ + + I T L G TG V F + A G D
Sbjct: 241 NYLVTASSD-GTLKILDL-LEGRLIYT---LQGHTGPVFTVSFSKGGELFASGGAD 291
Score = 203 (76.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 62/246 (25%), Positives = 105/246 (42%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLT 282
K + S+ +++A+ D L+ + H+ V SV F +G T
Sbjct: 60 KDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLAT 119
Query: 283 GSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG 342
S DK+++VW ++L HT V+ + V+ S D T +D ++
Sbjct: 120 ASEDKSIKVWSMYRQRFL---YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 343 ICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
C+ SD+ G+ + F+P G + + S+ VK+WDV+ + + H G
Sbjct: 177 QCVNNFSDS------VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 402 VTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVA 460
V ISF + YL TA+ DG +K+ DL + + + + P +V F G A
Sbjct: 231 VNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTG--PVFTVSFSKGGELFASG 288
Query: 461 SADIRV 466
AD +V
Sbjct: 289 GADTQV 294
Score = 165 (63.1 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 63/256 (24%), Positives = 101/256 (39%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH +TS+ G T S D + +W + H V +V
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHAR---AYRYVGHKDVVTSVQFSPHG 72
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+AS D T + + S+ P S F DG L T + + +K
Sbjct: 73 NLLASASRDRTVRLWIPDKR---GKFSEFKAHTAP--VRSVDFSADGQFLATASEDKSIK 127
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+W + Q + H V FS +G + + + D +K+WD + +F SDS
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF--SDS 185
Query: 442 ETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAK 501
N VDF+ SG+ +A A +D V +V V+ + ++ + SG G C+ F P
Sbjct: 186 VGFANFVDFNPSGTCIASAGSDQTV-KVWDVRVN-KLLQHYQVHSG-G-VNCISFHPSDN 241
Query: 502 YIAVGSMDRNLRVFGL 517
Y+ S D L++ L
Sbjct: 242 YLVTASSDGTLKILDL 257
Score = 157 (60.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 49/217 (22%), Positives = 88/217 (40%)
Query: 307 KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFH 366
K H A + ++ + K TAS D ++ + G + TS F
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYV-----GHKDVVTSVQFS 69
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P G +L + + + V++W + ++F H V ++ FS +G +LATA+ D +K+W
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
+ + + S F G + S D I+++ + + C+ F
Sbjct: 130 SMYRQRFLYSLYRHTHWV--RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ----CVNNFS 183
Query: 484 DLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN 520
D G A V F P IA D+ ++V+ + N
Sbjct: 184 D--SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 395 FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453
F GH A+T++ S NG LATA+ D + LW+ + + R++ + SV F
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKP--HARAYRYVGHKDVVTSVQFSPH 71
Query: 454 GSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRN 511
G+ LA AS D +R++ + + ++ K T V F D +++A S D++
Sbjct: 72 GNLLASASRDRTVRLW-IPDKRGKFSEFKAH-----TAPVRSVDFSADGQFLATASEDKS 125
Query: 512 LRVFGL 517
++V+ +
Sbjct: 126 IKVWSM 131
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 209 RYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKV 268
R +L H ++ G+ + H S + + T D + D G+++ TL GH+ V
Sbjct: 216 RVNKLLQH--YQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Query: 269 TSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303
+V F G+LF +G AD V +W+ + D CK
Sbjct: 274 FTVSFSKGGELFASGGADTQVLLWRTNFD-ELHCK 307
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 258 (95.9 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 73/264 (27%), Positives = 130/264 (49%)
Query: 211 TQLASHPLHKTSKPGIVSLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKK- 267
T L LH +V +++S D +ATG + +A ++D +G+ V S+K
Sbjct: 268 TNLNIDLLHNLQHNSVVCC-VNFSNDGKYLATG-CNRSAQIYDVDTGKKVHAFVDESEKD 325
Query: 268 ----VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
+ SV F +G+ TG+ DKTV+VW + +HT H ++ ++ + +
Sbjct: 326 GDLYIRSVCFSPDGNYLATGAEDKTVKVW---DIHTKKIQHTFYGHELDIYSLDYSSDGR 382
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
+ V+ S D +D+ G C + + G G TS A PDG ++ G+ + +V++
Sbjct: 383 FIVSGSGDKKAKIWDIEKGKCAFTLGNEEV-GPKNGVTSVAMSPDGRLVAAGSLDNIVRL 441
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDL---RKLKNFRSFESS 439
WD ++ + +++GH+ +V +++FS +G LA+ + D +KLWDL R R+ +
Sbjct: 442 WDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNG 501
Query: 440 DSETPTNSVDFDHSGSYLAVASAD 463
+ SV F GS+L S D
Sbjct: 502 HKDFVL-SVAFSPDGSWLISGSKD 524
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 64/233 (27%), Positives = 108/233 (46%)
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ-VSDAGTDGRP 357
N D H L+ H + V V KY T + + YD+ +G + V ++ DG
Sbjct: 271 NIDLLHNLQ-HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDG-- 326
Query: 358 EGYT-SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ Y S F PDG L TG + VK+WD+ ++ F GH + ++ +S +G ++ +
Sbjct: 327 DLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVS 386
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSET-PTN---SVDFDHSGSYLAVASADIRVYQVAS 471
+ D K+WD+ K K +F + E P N SV G +A S D + ++
Sbjct: 387 GSGDKKAKIWDIEKGKC--AFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLD-NIVRLWD 443
Query: 472 VKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPS 524
+ + + L V F PD K +A GS+D++L+++ L G+ + S
Sbjct: 444 AQTGYFLERYEGHLDSVYS---VAFSPDGKSLASGSLDKSLKLWDLSGSRSRS 493
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 62/210 (29%), Positives = 96/210 (45%)
Query: 226 IVSLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLS----GHSKKVTSVKFVTEGDL 279
I SLD YS D I +G D A ++D G+ TL G VTSV +G L
Sbjct: 372 IYSLD--YSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRL 429
Query: 280 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDL 339
GS D VR+W ++ G + ++ + H V +V K + SLD + +DL
Sbjct: 430 VAAGSLDNIVRLWD-AQTGYFLERY--EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
Query: 340 SSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV 399
S ++ A +G + S AF PDG L +G+ + V+ WD ++ GH
Sbjct: 487 SGSRSRSRCR-ATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHK 545
Query: 400 GAVTAISFS-ENGYY--LATAAHD-GVKLW 425
+V +++ S +N + AT + D +LW
Sbjct: 546 NSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 63/267 (23%), Positives = 109/267 (40%)
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDC--KHTLKDHTAEVQAVTVHAT 321
H+ V V F +G TG +++ +++ + KD +++V
Sbjct: 280 HNSVVCCVNFSNDGKYLATG-CNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 322 NKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381
Y T + D T +D+ T+ G S + DG + +G+ +
Sbjct: 339 GNYLATGAEDKTVKVWDIH-----TKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKA 393
Query: 382 KIWDV-KSQANVAKFDGHVG---AVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
KIWD+ K + + VG VT+++ S +G +A + D V+LWD + +
Sbjct: 394 KIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERY 453
Query: 437 ESS-DSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC 493
E DS SV F G LA S D ++++ ++ ++ C TF
Sbjct: 454 EGHLDS---VYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDF--VLS 508
Query: 494 VKFGPDAKYIAVGSMDRNLRVFGLPGN 520
V F PD ++ GS DR+++ F P N
Sbjct: 509 VAFSPDGSWLISGSKDRSVQ-FWDPRN 534
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 256 (95.2 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 79/326 (24%), Positives = 136/326 (41%)
Query: 200 ALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT 259
ALA +A + Q+ H + + + I T G + ++ R
Sbjct: 181 ALARQEAHKWVQQINLHASQVADTRPVAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEI 240
Query: 260 TLSGHSKKVTSVKF----VTEGDL----FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
GHS + +F T+ D ++ S D TV +W S++ L+ H
Sbjct: 241 KFIGHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIG---ELEQHPQ 297
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
V V H + TA D+TW YDL+ T+ +G + AFHPDG +
Sbjct: 298 RVSKVAFHPNGHHLATACFDSTWRMYDLT-----TKKELLYQEGHSKSVADVAFHPDGSV 352
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKL 430
TG + ++WD+++ + DGH + ++ + NGY + T + D +K+WDLR
Sbjct: 353 ALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMR 412
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTG- 489
+N + + S V D +G YL AS D + ++ W ++ L G
Sbjct: 413 RNTYTMPAHTSVV--TRVRADAAGQYLVSASFDCTLKMWSTT--GWQPLR---QLQGHDT 465
Query: 490 KATCVKFGPDAKYIAVGSMDRNLRVF 515
+ CV PD +++ + DR +++
Sbjct: 466 RILCVDISPDGQWMCSSAFDRTFKLW 491
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 255 (94.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 84/293 (28%), Positives = 133/293 (45%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGD 278
K K I S+D S +AT DT +L++ +P + + GH VTSV+F G+
Sbjct: 15 KGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV-GHKDVVTSVQFSPLGN 73
Query: 279 LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYD 338
L + S D+TVR+W + G K HTA V++V A ++ TAS D + ++
Sbjct: 74 LLASASRDRTVRLWIPDKRGK---SSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWN 130
Query: 339 LSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGH 398
+ L + A F PDG ++ + + + +KIWD ++ V F
Sbjct: 131 MYRQRFLYSLYR-----HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 399 VGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457
VG + F+ NG +A+A D VK+WD+R K + ++ N V F SG+Y+
Sbjct: 186 VGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGV--NCVSFHPSGNYI 243
Query: 458 AVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMD 509
AS+D ++ + + I T L G TG V F + + G D
Sbjct: 244 ITASSD-GTLKILDL-LEGRLIYT---LQGHTGPVFTVSFSKGGELFSSGGAD 291
Score = 202 (76.2 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 55/205 (26%), Positives = 94/205 (45%)
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H+ V SV F +G T S DK+++VW ++L HT V+ +
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFL---YSLYRHTHWVRCAKFSPDGR 157
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSEALVK 382
V+ S D T +D ++ C+ SD+ G+ + F+P+G + + S+ VK
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDS------VGFANFVDFNPNGTCIASAGSDHTVK 211
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
IWD++ + + H G V +SF +G Y+ TA+ DG +K+ DL + + + +
Sbjct: 212 IWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTG 271
Query: 442 ETPTNSVDFDHSGSYLAVASADIRV 466
P +V F G + AD +V
Sbjct: 272 --PVFTVSFSKGGELFSSGGADTQV 294
Score = 192 (72.6 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 52/165 (31%), Positives = 77/165 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G TS F P G L T + + + +W+ K QA ++ GH VT++ FS G L
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 415 ATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+A+ D V+LW K F++ + P SVDF G +LA AS D S+K
Sbjct: 76 ASASRDRTVRLWIPDKRGKSSEFKAHTA--PVRSVDFSADGQFLATASED------KSIK 127
Query: 474 ADWNCIKT---FPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
WN + + T C KF PD + I S D+ ++++
Sbjct: 128 V-WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Score = 164 (62.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 50/201 (24%), Positives = 85/201 (42%)
Query: 228 SLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
S+D +AT D + +++ + + +L H+ V KF +G L ++ S DK
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT- 346
T+++W + N C + D V + +A D+T +D+ L
Sbjct: 167 TIKIWDTT---NKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQH 223
Query: 347 -QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
QV G + +FHP G + T +S+ +KI D+ + GH G V +
Sbjct: 224 YQVHSGGVN-------CVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTV 276
Query: 406 SFSENGYYLATAAHDG-VKLW 425
SFS+ G ++ D V LW
Sbjct: 277 SFSKGGELFSSGGADTQVLLW 297
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 209 RYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKV 268
R +L H ++ G+ + H S + I T D + D G+++ TL GH+ V
Sbjct: 216 RVNKLLQH--YQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Query: 269 TSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK 307
+V F G+LF +G AD V +W+ + D +CK +K
Sbjct: 274 FTVSFSKGGELFSSGGADTQVLLWRTNFD-YLNCKDMIK 311
Score = 120 (47.3 bits), Expect = 0.00049, P = 0.00049
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 395 FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453
F GH A+T++ FS +G LATA+ D + LW+ + R+F + SV F
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKP--QARAFRYVGHKDVVTSVQFSPL 71
Query: 454 GSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLR 513
G+ LA AS D V K K+ + T V F D +++A S D++++
Sbjct: 72 GNLLASASRDRTVRLWIPDKRG----KSSEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 514 VFGL 517
V+ +
Sbjct: 128 VWNM 131
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 256 (95.2 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 78/297 (26%), Positives = 141/297 (47%)
Query: 232 HYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF-------VTEGDLFLT 282
H+S + ++AT L+ P ++ TL GH+ V ++ F + + D+ L
Sbjct: 237 HFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLA 296
Query: 283 G-SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+AD +V++W D + ++ HT V VT H + ++ T D +W +DL +
Sbjct: 297 SCAADGSVKLWSLDSD---EPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
Q +G G AFH DG + GTG +A ++WD+++ + +GH+
Sbjct: 354 -----QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKE 408
Query: 402 VTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDH-SGSYLAV 459
+ I+FS NGY++AT + D K+WDLR+ + + + + V F+ G++L
Sbjct: 409 IYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAH--QNLVTGVKFEPIHGNFLLT 466
Query: 460 ASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ D ++ + W+ +KT L+G GK + D + IA S DR +++
Sbjct: 467 GAYD-NTAKIWT-HPGWSPLKT---LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/169 (24%), Positives = 74/169 (43%)
Query: 218 LHKTSKP-GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE 276
LH+ G+ + H + TGG+D ++D +G+ + L GH K++ + F
Sbjct: 358 LHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN 417
Query: 277 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWC 335
G TGS D T +VW + C +T+ H V V + + +T + DNT
Sbjct: 418 GYHIATGSGDNTCKVWDLRQRR---CVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 474
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
+ L + AG +G+ G ++ DG ++ T + + K+W
Sbjct: 475 IWTHPGWSPLKTL--AGHEGKVMGLDISS---DGQLIATCSYDRTFKLW 518
Score = 119 (46.9 bits), Expect = 0.00071, P = 0.00071
Identities = 50/194 (25%), Positives = 78/194 (40%)
Query: 341 SGIC-LTQVSDAGTDGRPEGYTS----AAFHPDGLI--------LGTGTSEALVKIWDVK 387
SG+C L V D G+ + FHP + L + ++ VK+W +
Sbjct: 251 SGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLD 310
Query: 388 SQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTN 446
S VA +GH V +++ +G +L T +D +LWDL + E
Sbjct: 311 SDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGV--Y 368
Query: 447 SVDFDHSGSYLAVASADI--RVYQVASVKADWNCIKTFPDLSGTGKATC-VKFGPDAKYI 503
+ F GS D RV+ + + + CI F L G K + F P+ +I
Sbjct: 369 DIAFHQDGSLAGTGGLDAFGRVWDLRTGR----CIM-F--LEGHLKEIYGINFSPNGYHI 421
Query: 504 AVGSMDRNLRVFGL 517
A GS D +V+ L
Sbjct: 422 ATGSGDNTCKVWDL 435
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 256 (95.2 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 78/297 (26%), Positives = 143/297 (48%)
Query: 232 HYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF-------VTEGDLFLT 282
H+S + ++AT L+ P +V TL GHS V ++ F + + D+ L
Sbjct: 237 HFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLA 296
Query: 283 G-SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+AD +V++W D + ++ H+ V V H + ++ T D++W +DL +
Sbjct: 297 SCAADGSVKLWSLESD---EPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEA 353
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
Q +G +G AFH DG + GTG +A ++WD+++ + +GH+
Sbjct: 354 -----QEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKE 408
Query: 402 VTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFD-HSGSYLAV 459
+ ++FS NGY++AT + D K+WDLR+ K + + + V F+ + G++L
Sbjct: 409 IYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAH--QNLVTGVKFEPNHGNFLLT 466
Query: 460 ASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ D ++ + W+ +KT L+G GK + D + IA S DR +++
Sbjct: 467 GAYD-NTAKIWT-HPGWSPLKT---LAGHEGKVMGLDISLDGQLIATCSYDRTFKLW 518
Score = 138 (53.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 42/169 (24%), Positives = 73/169 (43%)
Query: 218 LHKTS-KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE 276
LH+ G+ + H + TGG+D ++D +G+ + L GH K++ + F
Sbjct: 358 LHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPN 417
Query: 277 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWC 335
G TGS D T +VW + C +T+ H V V + + +T + DNT
Sbjct: 418 GYHVATGSGDNTCKVWDLRQR---KCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAK 474
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
+ L + AG +G+ G + DG ++ T + + K+W
Sbjct: 475 IWTHPGWSPLKTL--AGHEGKVMGLDISL---DGQLIATCSYDRTFKLW 518
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 254 (94.5 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 90/343 (26%), Positives = 156/343 (45%)
Query: 188 LSQQRKKRQVPPALAPIDALERYTQLAS-HPLHKT---SKPGIVSLDIHYSKDVIATGGV 243
L + R+ +VP A +E +L S PL ++P + S ++ T
Sbjct: 223 LVRAREALEVPSAARAGRMVEMQKKLQSLAPLCSQVGDTRP-VSSAAFSEDSSLLLTSSW 281
Query: 244 DTNAVLFDRPSGQIVTTLSGHSKKV------TSVKFVTEGDLFL-TGSADKTVRVWQ-GS 295
L+ P ++ TL GH+ V VK E + + +G D V++W +
Sbjct: 282 SGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNN 341
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
E+ D + H V V H + ++ TA D++W +DL T+V +G
Sbjct: 342 EESIADITGHMP-H--RVSKVAFHPSGRFLATACYDSSWRLWDLEQK---TEVLHQ--EG 393
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA 415
+ ++H DG +L TG +A ++WD+++ + +GH+GAV + FS NG+++A
Sbjct: 394 HAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIA 453
Query: 416 TAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHS-GSYLAVASADIRVYQVASVK 473
T + D K+WDLR+ + + + + + V + GS+L S D ++ S K
Sbjct: 454 TGSQDNTCKIWDLRRRQPVYTIPAHTNLI--SDVKYQQECGSFLVTCSYDSTT-KIWSNK 510
Query: 474 ADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
W +KT L G K V P+++YIA S DR +++
Sbjct: 511 T-WQPLKT---LQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 138 (53.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVG-AVTAISFSENGYYLATAAHDGV-KLWDLRK 429
+ +G + VK+W ++ ++A GH+ V+ ++F +G +LATA +D +LWDL +
Sbjct: 325 MASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQ 384
Query: 430 LKNFRSFESSDSETPTNSVDFDHSGSYLAVASADI--RVYQVASVKADWNCIKTFPDLSG 487
E P + + + GS L D RV+ + + + CI F L G
Sbjct: 385 KTEVLHQEGHAK--PVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGR----CIM-F--LEG 435
Query: 488 -TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
G V F P+ +IA GS D +++ L
Sbjct: 436 HLGAVFGVDFSPNGFHIATGSQDNTCKIWDL 466
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 246 (91.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 72/267 (26%), Positives = 124/267 (46%)
Query: 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQA 315
++++T+ GH+K +++VKF G T SADKTV++W S+ C+ TL H V
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSD---LSCERTLTGHKLGVND 126
Query: 316 VTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGT-DGRPEGYTSAAFHPDGLILGT 374
A +K VTAS D T Y++ + V A T G F+P ++ +
Sbjct: 127 FAWSADSKSIVTASDDKTLKIYEVPT------VKMAKTLKGHTNYVFCCNFNPQSSLVVS 180
Query: 375 GTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNF 433
G+ + V+IWDV++ V H V+A+SF+ +G + + ++DG V++WD +
Sbjct: 181 GSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCV 240
Query: 434 RSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKA 491
++ D P V F +G Y+ ++ D ++++ K +K +
Sbjct: 241 KTLVD-DENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKT----LKQYQGHENNKYC 295
Query: 492 TCVKFG-PDAKYIAVGSMDRNLRVFGL 517
F K+I GS D + V+ L
Sbjct: 296 IFANFSVTGGKWIISGSEDCKIYVWNL 322
Score = 213 (80.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 71/299 (23%), Positives = 133/299 (44%)
Query: 175 PAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLD-IHY 233
PA ++ ++ N ++ VP A AP + E A + L T + S+ + +
Sbjct: 34 PAALSSVSPANPPITA------VPEATAPTTSQESTIPGAGYKLISTIEGHTKSISAVKF 87
Query: 234 SK--DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
S + T D +++ TL+GH V + + +T S DKT+++
Sbjct: 88 SPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKI 147
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
+ E TLK HT V + + V+ S D + +D+ +G+C+ + A
Sbjct: 148 Y---EVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLP-A 203
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKS-QANVAKFDGHVGAVTAISFSEN 410
+D P ++ +F+ DG ++ +G+ + LV+IWD + Q D V + FS N
Sbjct: 204 HSD--P--VSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPN 259
Query: 411 GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
G Y+ ++ D +KLWD K K + ++ ++ +F +G ++ S D ++Y
Sbjct: 260 GKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIY 318
Score = 180 (68.4 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 50/193 (25%), Positives = 88/193 (45%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ +G D + ++D +G V TL HS V++V F +G L +GS D VR+W +
Sbjct: 177 LVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW---D 233
Query: 297 DGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
N C TL D V V KY ++++LDNT +D G L Q G +
Sbjct: 234 TANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQ--GHEN 291
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA 415
+ G + +G+ + + +W+++++ V +GH AV A +A
Sbjct: 292 NKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIA 351
Query: 416 TAA---HDGVKLW 425
+ A + +++W
Sbjct: 352 SGALEPDNTIRIW 364
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 50/208 (24%), Positives = 96/208 (46%)
Query: 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293
SK ++ T D +++ P+ ++ TL GH+ V F + L ++GS D++VR+W
Sbjct: 133 SKSIV-TASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWD 191
Query: 294 GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGT 353
G C TL H+ V AV+ + + S D +D ++G C+ + D
Sbjct: 192 -VRTGM--CVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVD--D 246
Query: 354 DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI--SFS-EN 410
+ P + F P+G + + + +K+WD + ++ GH I +FS
Sbjct: 247 ENPPVAFVK--FSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTG 304
Query: 411 GYYLATAAHD-GVKLWDLRKLKNFRSFE 437
G ++ + + D + +W+L+ + +S E
Sbjct: 305 GKWIISGSEDCKIYVWNLQTKEVVQSLE 332
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 251 (93.4 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 84/299 (28%), Positives = 132/299 (44%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGD 278
K K I S D + IAT DT +L+ +P + + GH VTS++F +G+
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQGN 73
Query: 279 LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYD 338
L + S D+TVR+W G K HTA V++V A + VTAS D + +
Sbjct: 74 LLASASRDRTVRLWVLDRKGK---SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWS 130
Query: 339 LSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGH 398
+ L + A F PDG ++ + + + +KIWD ++ V F
Sbjct: 131 MFRQRFLYSLYR-----HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 399 VGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457
VG + F+ NG +A+A D VK+WD+R K + ++ N + F G+ L
Sbjct: 186 VGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGV--NCLSFHPLGNSL 243
Query: 458 AVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
AS+D V + ++ I T L G TG V F D + + G D + ++
Sbjct: 244 VTASSDGTVKMLDLIEG--RLIYT---LQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 146 (56.5 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 48/221 (21%), Positives = 87/221 (39%)
Query: 303 KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362
+ + K H A + + K TAS D + L + G + TS
Sbjct: 11 ERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-----GHKDVVTS 65
Query: 363 AAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-G 421
F P G +L + + + V++W + + ++F H V ++ FS +G L TA+ D
Sbjct: 66 LQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKS 125
Query: 422 VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCI 479
+K+W + + + S F G + S D I+++ + + C+
Sbjct: 126 IKVWSMFRQRFLYSLYRHTHWV--RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ----CV 179
Query: 480 KTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN 520
F D G A V F P+ IA D ++++ + N
Sbjct: 180 NNFSD--SVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMN 218
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 57/259 (22%), Positives = 99/259 (38%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
+ GH +TS F T S D + +W + H V ++
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHAR---AYRYVGHKDVVTSLQFS 69
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
+AS D T + L + S+ P S F DG +L T + +
Sbjct: 70 PQGNLLASASRDRTVRLWVLDRK---GKSSEFKAHTAP--VRSVDFSADGQLLVTASEDK 124
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438
+K+W + Q + H V FS +G + + + D +K+WD + +F
Sbjct: 125 SIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF-- 182
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
SDS N VDF+ +G+ +A A +D V ++ ++ N + + G C+ F P
Sbjct: 183 SDSVGFANFVDFNPNGTCIASAGSDHAV-KIWDIRM--NKLLQHYQVHSCG-VNCLSFHP 238
Query: 499 DAKYIAVGSMDRNLRVFGL 517
+ S D +++ L
Sbjct: 239 LGNSLVTASSDGTVKMLDL 257
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 252 (93.8 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 78/297 (26%), Positives = 139/297 (46%)
Query: 232 HYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF-------VTEGDLFLT 282
H+S + ++AT L+ P ++ TL GH+ V ++ F + + D+ L
Sbjct: 237 HFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLA 296
Query: 283 G-SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+AD +V++W D + ++ HT V V H + ++ T D +W +DL +
Sbjct: 297 SCAADGSVKLWSLDSD---EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
Q +G G AFH DG + GTG +A ++WD+++ + +GH+
Sbjct: 354 -----QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKE 408
Query: 402 VTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDH-SGSYLAV 459
+ ISFS NGY++AT + D K+WDLR+ + + + + V F+ G +L
Sbjct: 409 IYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAH--QNLVTGVKFEPIHGDFLLT 466
Query: 460 ASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ D ++ + W+ +KT L+G GK + D + IA S DR +++
Sbjct: 467 GAYD-NTAKIWT-HPGWSPLKT---LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/169 (24%), Positives = 74/169 (43%)
Query: 218 LHKTSKP-GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE 276
LH+ G+ + H + TGG+D ++D +G+ + L GH K++ + F
Sbjct: 358 LHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPN 417
Query: 277 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWC 335
G TGS D T +VW + C +T+ H V V + + +T + DNT
Sbjct: 418 GYHIATGSGDNTCKVWDLRQRR---CVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
+ L + AG +G+ G ++ DG ++ T + + K+W
Sbjct: 475 IWTHPGWSPLKTL--AGHEGKVMGLDISS---DGQLIATCSYDRTFKLW 518
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 250 (93.1 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 77/297 (25%), Positives = 140/297 (47%)
Query: 232 HYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF-------VTEGDLFLT 282
H+S + ++AT L+ P ++ TL GH+ V ++ F + + D+ L
Sbjct: 253 HFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLA 312
Query: 283 G-SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+AD +V++W D + ++ HT V V H + ++ T D +W +DL +
Sbjct: 313 SCAADGSVKLWSLDSD---EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 369
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
Q +G G AFH DG + GTG +A ++WD+++ + +GH+
Sbjct: 370 -----QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKE 424
Query: 402 VTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDH-SGSYLAV 459
+ I+FS NGY++AT + D K+WDLR+ + + + + V F+ G++L
Sbjct: 425 IYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAH--QNLVTGVKFEPIHGNFLLT 482
Query: 460 ASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ D ++ + W+ +KT L+G GK + D + IA S DR +++
Sbjct: 483 GAYD-NTAKIWT-HPGWSPLKT---LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/169 (24%), Positives = 74/169 (43%)
Query: 218 LHKTSKP-GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE 276
LH+ G+ + H + TGG+D ++D +G+ + L GH K++ + F
Sbjct: 374 LHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN 433
Query: 277 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWC 335
G TGS D T +VW + C +T+ H V V + + +T + DNT
Sbjct: 434 GYHIATGSGDNTCKVWDLRQRR---CVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 490
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
+ L + AG +G+ G ++ DG ++ T + + K+W
Sbjct: 491 IWTHPGWSPLKTL--AGHEGKVMGLDISS---DGQLIATCSYDRTFKLW 534
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 250 (93.1 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 77/297 (25%), Positives = 140/297 (47%)
Query: 232 HYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF-------VTEGDLFLT 282
H+S + ++AT L+ P ++ TL GH+ V ++ F + + D+ L
Sbjct: 255 HFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLA 314
Query: 283 G-SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+AD +V++W D + ++ HT V V H + ++ T D +W +DL +
Sbjct: 315 SCAADGSVKLWSLDSD---EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 371
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
Q +G G AFH DG + GTG +A ++WD+++ + +GH+
Sbjct: 372 -----QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKE 426
Query: 402 VTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDH-SGSYLAV 459
+ I+FS NGY++AT + D K+WDLR+ + + + + V F+ G++L
Sbjct: 427 IYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAH--QNLVTGVKFEPIHGNFLLT 484
Query: 460 ASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ D ++ + W+ +KT L+G GK + D + IA S DR +++
Sbjct: 485 GAYD-NTAKIWT-HPGWSPLKT---LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/169 (24%), Positives = 74/169 (43%)
Query: 218 LHKTSKP-GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE 276
LH+ G+ + H + TGG+D ++D +G+ + L GH K++ + F
Sbjct: 376 LHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN 435
Query: 277 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWC 335
G TGS D T +VW + C +T+ H V V + + +T + DNT
Sbjct: 436 GYHIATGSGDNTCKVWDLRQRR---CVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 492
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
+ L + AG +G+ G ++ DG ++ T + + K+W
Sbjct: 493 IWTHPGWSPLKTL--AGHEGKVMGLDISS---DGQLIATCSYDRTFKLW 536
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 249 (92.7 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 77/297 (25%), Positives = 139/297 (46%)
Query: 232 HYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF-------VTEGDLFLT 282
H+S + ++AT L+ P ++ TL GH+ V ++ F + + D+ L
Sbjct: 237 HFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLA 296
Query: 283 G-SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+AD +V++W D + ++ HT V V H + ++ T D +W +DL +
Sbjct: 297 SCAADGSVKLWSLDSD---EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
Q +G G AFH DG + GTG +A ++WD+++ + +GH+
Sbjct: 354 -----QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKE 408
Query: 402 VTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDH-SGSYLAV 459
+ I+FS NGY++AT + D K+WDLR+ + + + + V F+ G +L
Sbjct: 409 IYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAH--QNLVTGVKFEPIHGDFLLT 466
Query: 460 ASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ D ++ + W+ +KT L+G GK + D + IA S DR +++
Sbjct: 467 GAYD-NTAKIWT-HPGWSPLKT---LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/169 (24%), Positives = 74/169 (43%)
Query: 218 LHKTSKP-GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE 276
LH+ G+ + H + TGG+D ++D +G+ + L GH K++ + F
Sbjct: 358 LHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN 417
Query: 277 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWC 335
G TGS D T +VW + C +T+ H V V + + +T + DNT
Sbjct: 418 GYHIATGSGDNTCKVWDLRQRR---CVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
+ L + AG +G+ G ++ DG ++ T + + K+W
Sbjct: 475 IWTHPGWSPLKTL--AGHEGKVMGLDISS---DGQLIATCSYDRTFKLW 518
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 249 (92.7 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 79/290 (27%), Positives = 129/290 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
VS+ H KD++ + G D + P ++ T GH+ ++ F GD T S D
Sbjct: 358 VSMQPH--KDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGD 415
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT 346
TV++W + DC T + H+ V + T H+ + ++SLD T +D++S C
Sbjct: 416 TTVKLWDLCKG---DCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRC 472
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
+ G + S F P L T +++ + IWD ++ GH+ ++
Sbjct: 473 TLY-----GHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAI 527
Query: 407 FSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIR 465
F G+ +A+ GV KLWD RKL S + S P N V+FD SG LA AS +
Sbjct: 528 FDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPS--PGNEVNFDSSGRVLAQASGN-G 584
Query: 466 VYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
V + +K+ + + +A V F D + + G D +R +
Sbjct: 585 VIHLLDLKSG----EIHKLMGHENEAHTVVFSHDGEILFSGGSDGTVRTW 630
Score = 138 (53.6 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 43/167 (25%), Positives = 74/167 (44%)
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE 358
+Y K+ + H V V++ V+ D W L C V G G +
Sbjct: 341 DYKLKNIFRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPK--C--NVLLTGF-GHTD 395
Query: 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418
+ FHP G L T + + VK+WD+ + F+GH AV + ++ G ++A+++
Sbjct: 396 WLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSS 455
Query: 419 HDGV-KLWDLRKLK-NFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
D K+WD+ + + +DS NS++F + L +SAD
Sbjct: 456 LDKTSKIWDVNSERCRCTLYGHTDS---VNSIEFFPFSNTLLTSSAD 499
Score = 45 (20.9 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 90 LEQQLHTARQELSHALYQHDAACRVIARLKKERD 123
LE + +++L H D A + +++KERD
Sbjct: 160 LENENKNLKKDLKHYKQAADKAREDLLKIQKERD 193
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 249 (92.7 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 72/246 (29%), Positives = 119/246 (48%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
L + YS D ++A+ D ++D +G + TL GHS V SV F + L L ++D
Sbjct: 300 LSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRL-LASASD 358
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT 346
TV++W + G +HTL+ H V++V ++ +AS D+T +D +G L
Sbjct: 359 STVKIW---DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG-SLQ 414
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
+G + S F D +L + + ++ VKIWD + + +GH V ++
Sbjct: 415 HT----LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVI 470
Query: 407 FSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-- 463
FS + LA+A+ D V++WD K + + E S SV F H LA AS D
Sbjct: 471 FSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLV--TSVSFSHDSRLLASASNDQT 528
Query: 464 IRVYQV 469
+R++ +
Sbjct: 529 VRIWDI 534
Score = 227 (85.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 67/238 (28%), Positives = 119/238 (50%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
H S+ ++A+ D+ ++D +G + TL GH V SV F + L + S D TV++
Sbjct: 348 HDSR-LLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKI 405
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
W + G +HTL+ H V++V ++ +AS D+T +D +G L
Sbjct: 406 W---DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG-SLQHT--- 458
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411
+G + S F D +L + + + V+IWD + ++ +GH VT++SFS +
Sbjct: 459 -LEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDS 517
Query: 412 YYLATAAHDG-VKLWDLRKLKNFRSFESS-DSETPTNSVDFDHSGS-YLAVA-SADIR 465
LA+A++D V++WD+ RS + + D + ++ FD + S ++ V A IR
Sbjct: 518 RLLASASNDQTVRIWDIEA----RSLQHTFDLDATIEAMRFDKATSLWIQVTVKASIR 571
Score = 213 (80.0 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 72/259 (27%), Positives = 121/259 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GH V SV + + L + S D+TV++W +E G+ +HTL+ H+ V++V
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWD-TETGSL--QHTLEGHSDLVRSVIFSH 348
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
++ +AS D+T +D +G L +G + S F D +L + + ++
Sbjct: 349 DSRLLASAS-DSTVKIWDTGTG-SLQHT----LEGHRDWVRSVIFSHDSQLLASASDDST 402
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
VKIWD + + +GH V ++ FS + LA+A+ D VK+WD + E
Sbjct: 403 VKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGH 462
Query: 440 DSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGP 498
SV F H LA AS D R ++ + + K L G + T V F
Sbjct: 463 RDWV--RSVIFSHDSRLLASASDD-RTVRIWDTEKGSH--KH--TLEGHSSLVTSVSFSH 515
Query: 499 DAKYIAVGSMDRNLRVFGL 517
D++ +A S D+ +R++ +
Sbjct: 516 DSRLLASASNDQTVRIWDI 534
Score = 173 (66.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 46/170 (27%), Positives = 82/170 (48%)
Query: 228 SLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
S+ + ++A+ D+ ++D +G + TL GH V SV F + L + S D
Sbjct: 384 SVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS 443
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
TV++W + G +HTL+ H V++V ++ +AS D T +D G
Sbjct: 444 TVKIW---DTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKG----- 495
Query: 348 VSDAGT-DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD 396
S T +G TS +F D +L + +++ V+IWD+++++ FD
Sbjct: 496 -SHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFD 544
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 56/217 (25%), Positives = 94/217 (43%)
Query: 302 CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYT 361
C L+ H A V +V+ ++ +AS D T +D +G L +G +
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETG-SLQHT----LEGHSDLVR 342
Query: 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG 421
S F D +L + S++ VKIWD + + +GH V ++ FS + LA+A+ D
Sbjct: 343 SVIFSHDSRLLASA-SDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS 401
Query: 422 -VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNC 478
VK+WD + E SV F H LA AS D ++++ + +
Sbjct: 402 TVKIWDTGTGSLQHTLEGHRDWV--RSVIFSHDSQLLASASDDSTVKIWDTGTGSLQ-HT 458
Query: 479 IKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ D V F D++ +A S DR +R++
Sbjct: 459 LEGHRDW-----VRSVIFSHDSRLLASASDDRTVRIW 490
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 247 (92.0 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 77/297 (25%), Positives = 139/297 (46%)
Query: 232 HYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEG-------DLFLT 282
H+S + ++AT L+ P ++ TL GH+ V ++ F + D+ L
Sbjct: 238 HFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLA 297
Query: 283 G-SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+AD +V++W D + ++ HT V V H + ++ T D +W +DL +
Sbjct: 298 SCAADGSVKLWSLDSD---EPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 354
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
Q +G G AFH DG + GTG +A ++WD+++ + +GH+
Sbjct: 355 -----QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKE 409
Query: 402 VTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDH-SGSYLAV 459
+ I+FS NGY++AT + D K+WDLR+ + + + + V F+ G++L
Sbjct: 410 IYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAH--QNLVTGVKFEPIHGNFLLT 467
Query: 460 ASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ D ++ + W+ +KT L+G GK + D + IA S DR +++
Sbjct: 468 GAYD-NTAKIWT-HPGWSPLKT---LAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/169 (24%), Positives = 74/169 (43%)
Query: 218 LHKTSKP-GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTE 276
LH+ G+ + H + TGG+D ++D +G+ + L GH K++ + F
Sbjct: 359 LHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN 418
Query: 277 GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWC 335
G TGS D T +VW + C +T+ H V V + + +T + DNT
Sbjct: 419 GYHIATGSGDNTCKVWDLRQRR---CVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 475
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
+ L + AG +G+ G ++ DG ++ T + + K+W
Sbjct: 476 IWTHPGWSPLKTL--AGHEGKVMGLDISS---DGQLIATCSYDRTFKLW 519
Score = 118 (46.6 bits), Expect = 0.00092, P = 0.00092
Identities = 41/161 (25%), Positives = 68/161 (42%)
Query: 361 TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD 420
++ + P + L + ++ VK+W + S VA +GH V + + +G +L T +D
Sbjct: 285 STVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYD 344
Query: 421 -GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADI--RVYQVASVKADWN 477
+LWDL + E + F GS D RV+ + + +
Sbjct: 345 RSWRLWDLEAQEEILHQEGHSMGV--YDIAFHQDGSLAGTGGLDAFGRVWDLRTGR---- 398
Query: 478 CIKTFPDLSGTGKATC-VKFGPDAKYIAVGSMDRNLRVFGL 517
CI F L G K + F P+ +IA GS D +V+ L
Sbjct: 399 CIM-F--LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDL 436
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 249 (92.7 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 78/257 (30%), Positives = 120/257 (46%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
HS V+S+ + G L TG D V VW ++ +C +L HT ++++ + A
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKP---NCVMSLTGHTTPIESLQISAKE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V S + +DL + L + G S FHP G + +G+ + +K
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLL-----GHKANICSLDFHPYGSFVASGSLDTDIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WDV+ + + K+ H AV + FS +G +LA+AA D VKLWDL K FE +
Sbjct: 131 LWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM--FEFTGH 188
Query: 442 ETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPD 499
P N V+F S LA S+D IR + + +CI+ T C+ F PD
Sbjct: 189 SGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVV-SCIEE----EAT-PVRCILFNPD 242
Query: 500 AKYIAVGSMDRNLRVFG 516
+ G D +LRV+G
Sbjct: 243 GCCLYGGFQD-SLRVYG 258
Score = 217 (81.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 60/233 (25%), Positives = 102/233 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D ++ V +L+GH+ + S++ + +L + GS ++RVW E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H + + SLD +D+ C+ +
Sbjct: 94 AAKI--LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS-----H 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ F PDG L + + VK+WD+ + + +F GH G V + F + Y LA+
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLAS 206
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVY 467
+ D ++ WDL K E + TP + F+ G L D +RVY
Sbjct: 207 GSSDRTIRFWDLEKFHVVSCIE--EEATPVRCILFNPDGCCLYGGFQDSLRVY 257
Score = 189 (71.6 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 50/200 (25%), Positives = 93/200 (46%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
I SL I +++I G + ++D + +I+ TL GH + S+ F G +GS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C K HT V+ + K+ +A+ D+T +DL++G +
Sbjct: 126 DTDIKLWDVRRKG---CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM 182
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
+ + G G P FHP +L +G+S+ ++ WD++ V+ + V I
Sbjct: 183 FEFT--GHSG-PVNVVE--FHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCI 237
Query: 406 SFSENGYYLATAAHDGVKLW 425
F+ +G L D ++++
Sbjct: 238 LFNPDGCCLYGGFQDSLRVY 257
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/150 (26%), Positives = 68/150 (45%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W V V GH + ++ S + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF GS++A S D + ++ V+ CI F S
Sbjct: 93 EAAKILRTLLGHKANIC--SLDFHPYGSFVASGSLDTDI-KLWDVRRK-GCI--FKYKSH 146
Query: 488 TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
T C++F PD K++A + D ++++ L
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 138 (53.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 47/165 (28%), Positives = 75/165 (45%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H +A+G +DT+ L+D R G I S H++ V ++F +G
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS-HTQAVRCLRFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+ + D TV++W + G + T H+ V V H + + S D T F+DL
Sbjct: 164 SAADDHTVKLWDLTA-GKVMFEFT--GHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEK 220
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWD 385
++ + + T R F+PDG L G ++L V W+
Sbjct: 221 FHVVSCIEEEATPVR-----CILFNPDGCCLYGGFQDSLRVYGWE 260
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 37/150 (24%), Positives = 70/150 (46%)
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRK 429
++ G+ +++WD+++ + GH + ++ F G ++A+ + D +KLWD+R+
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR 136
Query: 430 LKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKA-DWNCIKTFPDLSG- 487
++S + F G +LA A+ D +VK D K + +G
Sbjct: 137 KGCIFKYKSHTQAV--RCLRFSPDGKWLASAADD------HTVKLWDLTAGKVMFEFTGH 188
Query: 488 TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+G V+F P +A GS DR +R + L
Sbjct: 189 SGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 249 (92.7 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 68/234 (29%), Positives = 111/234 (47%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+H +D + + D + P G ++ T SGH+ ++ F G T S D T++
Sbjct: 368 MHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIK 427
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
+W ++ +C TL+ H V + T H+ + +ASLD T +D++S C +
Sbjct: 428 LWDLNKG---ECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLY- 483
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSEN 410
G + S F P IL T +++ + +WD ++ GH+ +V +F+
Sbjct: 484 ----GHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPR 539
Query: 411 GYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
G+ +A+ GV KLWD RKL S + S N V+FD SG LA ASA+
Sbjct: 540 GHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSG--NEVNFDQSGRVLAQASAN 591
Score = 225 (84.3 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 63/238 (26%), Positives = 107/238 (44%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
H S +AT D+ L+D G+ TL GH+ V S + + GD + S D T ++
Sbjct: 411 HPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKI 470
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
W + + C++TL HT V ++ + +TAS D T +D +G C +
Sbjct: 471 WDVNSER---CRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKC-----EQ 522
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411
G A F P G I+ + + + K+WD + + D + ++F ++G
Sbjct: 523 SLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSG 582
Query: 412 YYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVY 467
LA A+ +G+ L LK+ + + E+ +SV F H G L +D IR++
Sbjct: 583 RVLAQASANGII--HLLDLKSGQIHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 167 (63.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 44/168 (26%), Positives = 78/168 (46%)
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG-ICLTQVSDAGTDGRP 357
+Y + + H V + +H Y ++ S D W L G + LT G+ G
Sbjct: 349 DYKLNNIFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLT-----GS-GHT 402
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
+ + FHP G L T + ++ +K+WD+ +GH AV + ++ G ++A+A
Sbjct: 403 DWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASA 462
Query: 418 AHDGV-KLWDLRKLK-NFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
+ D K+WD+ + + + +DS NS++F + L ASAD
Sbjct: 463 SLDMTSKIWDVNSERCRYTLYGHTDS---VNSIEFFPFSNILLTASAD 507
Score = 43 (20.2 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 90 LEQQLHTARQELSHALYQHDAACRVIARLKKERD 123
LE + ++EL H + A + R +KERD
Sbjct: 154 LETENKNLKKELKHFKQAAEKAKEDLLRTQKERD 187
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 248 (92.4 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 78/258 (30%), Positives = 121/258 (46%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
H+ V+S+ G L TG D V +W ++ +C +L HT+ V++V ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESVRLNTPE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V S + +DL + L + G S FHP G + +G+ + +K
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLM-----GHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WD++ + V ++ GH AV + FS +G +LA+AA D VKLWDL K F
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 442 ETPTNSVDFDHSGSYL-AVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
P N V+F H YL A S+D IR + + + +CI+ P G V F P
Sbjct: 191 --PVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEP-----GPVRSVLFNP 241
Query: 499 DAKYIAVGSMDRNLRVFG 516
D + G D +LRV+G
Sbjct: 242 DGCCLYSGCQD-SLRVYG 258
Score = 243 (90.6 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 65/233 (27%), Positives = 104/233 (44%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D L+ + +L+GH+ V SV+ T +L + GS ++RVW E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H ++ + S D +D+ C+ + G
Sbjct: 94 AAKI--LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR-----GH 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ F PDG L + + VK+WD+ + +++F GH G V + F N Y LA+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVY 467
+ D ++ WDL K + E P SV F+ G L D +RVY
Sbjct: 207 GSSDRTIRFWDLEKFQVVSCIEGEPG--PVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 46/200 (23%), Positives = 100/200 (50%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ ++ +++I G + ++D + +I+ TL GH + S+ F G+ +GS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C + H+ V+ + K+ +A+ D+T +DL++G +
Sbjct: 126 DTNIKLWDIRRKG---CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
++ G G P FHP+ +L +G+S+ ++ WD++ V+ +G G V ++
Sbjct: 183 SEFP--GHTG-PVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 406 SFSENGYYLATAAHDGVKLW 425
F+ +G L + D ++++
Sbjct: 238 LFNPDGCCLYSGCQDSLRVY 257
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/165 (31%), Positives = 74/165 (44%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H + +A+G DTN L+D R G V GHS+ V ++F +G
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+ + D TV++W + G + HT V V H + S D T F+DL
Sbjct: 164 SAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWD 385
QV +G P S F+PDG L +G ++L V W+
Sbjct: 221 ----FQVVSC-IEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/154 (25%), Positives = 75/154 (48%)
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P+ LI+ G+ +++WD+++ + GH + ++ F G ++A+ + D +KLW
Sbjct: 74 PEELIVA-GSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
D+R+ K F + F G +LA A+ D ++++ + + K + FP
Sbjct: 133 DIRR-KGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM----MSEFP 186
Query: 484 DLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
TG V+F P+ +A GS DR +R + L
Sbjct: 187 --GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W + + GH V ++ + + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF G ++A S D + ++ ++ C+ + G
Sbjct: 93 EAAKILRTLMGHKANIC--SLDFHPYGEFVASGSQDTNI-KLWDIRRK-GCVFRY---RG 145
Query: 488 TGKAT-CVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+A C++F PD K++A + D ++++ L SE
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 248 (92.4 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 78/258 (30%), Positives = 121/258 (46%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
H+ V+S+ G L TG D V +W ++ +C +L HT+ V++V ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESVRLNTPE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V S + +DL + L + G S FHP G + +G+ + +K
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLM-----GHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WD++ + V ++ GH AV + FS +G +LA+AA D VKLWDL K F
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 442 ETPTNSVDFDHSGSYL-AVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
P N V+F H YL A S+D IR + + + +CI+ P G V F P
Sbjct: 191 --PVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEP-----GPVRSVLFNP 241
Query: 499 DAKYIAVGSMDRNLRVFG 516
D + G D +LRV+G
Sbjct: 242 DGCCLYSGCQD-SLRVYG 258
Score = 243 (90.6 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 65/233 (27%), Positives = 104/233 (44%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D L+ + +L+GH+ V SV+ T +L + GS ++RVW E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H ++ + S D +D+ C+ + G
Sbjct: 94 AAKI--LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR-----GH 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ F PDG L + + VK+WD+ + +++F GH G V + F N Y LA+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVY 467
+ D ++ WDL K + E P SV F+ G L D +RVY
Sbjct: 207 GSSDRTIRFWDLEKFQVVSCIEGEPG--PVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 46/200 (23%), Positives = 100/200 (50%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ ++ +++I G + ++D + +I+ TL GH + S+ F G+ +GS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C + H+ V+ + K+ +A+ D+T +DL++G +
Sbjct: 126 DTNIKLWDIRRKG---CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
++ G G P FHP+ +L +G+S+ ++ WD++ V+ +G G V ++
Sbjct: 183 SEFP--GHTG-PVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 406 SFSENGYYLATAAHDGVKLW 425
F+ +G L + D ++++
Sbjct: 238 LFNPDGCCLYSGCQDSLRVY 257
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/165 (31%), Positives = 74/165 (44%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H + +A+G DTN L+D R G V GHS+ V ++F +G
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+ + D TV++W + G + HT V V H + S D T F+DL
Sbjct: 164 SAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWD 385
QV +G P S F+PDG L +G ++L V W+
Sbjct: 221 ----FQVVSC-IEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/154 (25%), Positives = 75/154 (48%)
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P+ LI+ G+ +++WD+++ + GH + ++ F G ++A+ + D +KLW
Sbjct: 74 PEELIVA-GSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
D+R+ K F + F G +LA A+ D ++++ + + K + FP
Sbjct: 133 DIRR-KGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM----MSEFP 186
Query: 484 DLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
TG V+F P+ +A GS DR +R + L
Sbjct: 187 --GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W + + GH V ++ + + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF G ++A S D + ++ ++ C+ + G
Sbjct: 93 EAAKILRTLMGHKANIC--SLDFHPYGEFVASGSQDTNI-KLWDIRRK-GCVFRY---RG 145
Query: 488 TGKAT-CVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+A C++F PD K++A + D ++++ L SE
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 248 (92.4 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 78/258 (30%), Positives = 121/258 (46%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
H+ V+S+ G L TG D V +W ++ +C +L HT+ V++V ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESVRLNTPE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V S + +DL + L + G S FHP G + +G+ + +K
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLM-----GHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WD++ + V ++ GH AV + FS +G +LA+AA D VKLWDL K F
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 442 ETPTNSVDFDHSGSYL-AVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
P N V+F H YL A S+D IR + + + +CI+ P G V F P
Sbjct: 191 --PVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEP-----GPVRSVLFNP 241
Query: 499 DAKYIAVGSMDRNLRVFG 516
D + G D +LRV+G
Sbjct: 242 DGCCLYSGCQD-SLRVYG 258
Score = 243 (90.6 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 65/233 (27%), Positives = 104/233 (44%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D L+ + +L+GH+ V SV+ T +L + GS ++RVW E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H ++ + S D +D+ C+ + G
Sbjct: 94 AAKI--LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR-----GH 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ F PDG L + + VK+WD+ + +++F GH G V + F N Y LA+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVY 467
+ D ++ WDL K + E P SV F+ G L D +RVY
Sbjct: 207 GSSDRTIRFWDLEKFQVVSCIEGEPG--PVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 46/200 (23%), Positives = 100/200 (50%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ ++ +++I G + ++D + +I+ TL GH + S+ F G+ +GS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C + H+ V+ + K+ +A+ D+T +DL++G +
Sbjct: 126 DTNIKLWDIRRKG---CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
++ G G P FHP+ +L +G+S+ ++ WD++ V+ +G G V ++
Sbjct: 183 SEFP--GHTG-PVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 406 SFSENGYYLATAAHDGVKLW 425
F+ +G L + D ++++
Sbjct: 238 LFNPDGCCLYSGCQDSLRVY 257
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/165 (31%), Positives = 74/165 (44%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H + +A+G DTN L+D R G V GHS+ V ++F +G
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+ + D TV++W + G + HT V V H + S D T F+DL
Sbjct: 164 SAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWD 385
QV +G P S F+PDG L +G ++L V W+
Sbjct: 221 ----FQVVSC-IEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/154 (25%), Positives = 75/154 (48%)
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P+ LI+ G+ +++WD+++ + GH + ++ F G ++A+ + D +KLW
Sbjct: 74 PEELIVA-GSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
D+R+ K F + F G +LA A+ D ++++ + + K + FP
Sbjct: 133 DIRR-KGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM----MSEFP 186
Query: 484 DLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
TG V+F P+ +A GS DR +R + L
Sbjct: 187 --GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W + + GH V ++ + + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF G ++A S D + ++ ++ C+ + G
Sbjct: 93 EAAKILRTLMGHKANIC--SLDFHPYGEFVASGSQDTNI-KLWDIRRK-GCVFRY---RG 145
Query: 488 TGKAT-CVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+A C++F PD K++A + D ++++ L SE
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 248 (92.4 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 78/258 (30%), Positives = 121/258 (46%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
H+ V+S+ G L TG D V +W ++ +C +L HT+ V++V ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESVRLNTPE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V S + +DL + L + G S FHP G + +G+ + +K
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLM-----GHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WD++ + V ++ GH AV + FS +G +LA+AA D VKLWDL K F
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 442 ETPTNSVDFDHSGSYL-AVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
P N V+F H YL A S+D IR + + + +CI+ P G V F P
Sbjct: 191 --PVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEP-----GPVRSVLFNP 241
Query: 499 DAKYIAVGSMDRNLRVFG 516
D + G D +LRV+G
Sbjct: 242 DGCCLYSGCQD-SLRVYG 258
Score = 243 (90.6 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 65/233 (27%), Positives = 104/233 (44%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D L+ + +L+GH+ V SV+ T +L + GS ++RVW E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H ++ + S D +D+ C+ + G
Sbjct: 94 AAKI--LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR-----GH 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ F PDG L + + VK+WD+ + +++F GH G V + F N Y LA+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVY 467
+ D ++ WDL K + E P SV F+ G L D +RVY
Sbjct: 207 GSSDRTIRFWDLEKFQVVSCIEGEPG--PVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 46/200 (23%), Positives = 100/200 (50%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ ++ +++I G + ++D + +I+ TL GH + S+ F G+ +GS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C + H+ V+ + K+ +A+ D+T +DL++G +
Sbjct: 126 DTNIKLWDIRRKG---CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
++ G G P FHP+ +L +G+S+ ++ WD++ V+ +G G V ++
Sbjct: 183 SEFP--GHTG-PVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 406 SFSENGYYLATAAHDGVKLW 425
F+ +G L + D ++++
Sbjct: 238 LFNPDGCCLYSGCQDSLRVY 257
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/165 (31%), Positives = 74/165 (44%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H + +A+G DTN L+D R G V GHS+ V ++F +G
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+ + D TV++W + G + HT V V H + S D T F+DL
Sbjct: 164 SAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWD 385
QV +G P S F+PDG L +G ++L V W+
Sbjct: 221 ----FQVVSC-IEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/154 (25%), Positives = 75/154 (48%)
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P+ LI+ G+ +++WD+++ + GH + ++ F G ++A+ + D +KLW
Sbjct: 74 PEELIVA-GSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
D+R+ K F + F G +LA A+ D ++++ + + K + FP
Sbjct: 133 DIRR-KGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM----MSEFP 186
Query: 484 DLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
TG V+F P+ +A GS DR +R + L
Sbjct: 187 --GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W + + GH V ++ + + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF G ++A S D + ++ ++ C+ + G
Sbjct: 93 EAAKILRTLMGHKANIC--SLDFHPYGEFVASGSQDTNI-KLWDIRRK-GCVFRY---RG 145
Query: 488 TGKAT-CVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+A C++F PD K++A + D ++++ L SE
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 247 (92.0 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 77/258 (29%), Positives = 121/258 (46%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
H+ V+S+ G L TG D V +W ++ +C +L HT+ V++V ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESVRLNTPE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V S + +DL + L + G S FHP G + +G+ + +K
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLM-----GHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WD++ + V ++ GH AV + FS +G +LA+AA D VKLWDL K F
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 442 ETPTNSVDFDHSGSYL-AVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
P N V+F H YL A S+D IR + + + +CI+ P G + F P
Sbjct: 191 --PVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEP-----GPVRSILFNP 241
Query: 499 DAKYIAVGSMDRNLRVFG 516
D + G D +LRV+G
Sbjct: 242 DGCCLYSGCQD-SLRVYG 258
Score = 242 (90.2 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 64/233 (27%), Positives = 104/233 (44%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D L+ + +L+GH+ V SV+ T +L + GS ++RVW E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H ++ + S D +D+ C+ + G
Sbjct: 94 AAKI--LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR-----GH 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ F PDG L + + VK+WD+ + +++F GH G V + F N Y LA+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVY 467
+ D ++ WDL K + E P S+ F+ G L D +RVY
Sbjct: 207 GSSDRTIRFWDLEKFQVVSCIEGEPG--PVRSILFNPDGCCLYSGCQDSLRVY 257
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 47/200 (23%), Positives = 100/200 (50%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ ++ +++I G + ++D + +I+ TL GH + S+ F G+ +GS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C + H+ V+ + K+ +A+ D+T +DL++G +
Sbjct: 126 DTNIKLWDIRRKG---CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
++ G G P FHP+ +L +G+S+ ++ WD++ V+ +G G V +I
Sbjct: 183 SEFP--GHTG-PVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSI 237
Query: 406 SFSENGYYLATAAHDGVKLW 425
F+ +G L + D ++++
Sbjct: 238 LFNPDGCCLYSGCQDSLRVY 257
Score = 166 (63.5 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 57/190 (30%), Positives = 83/190 (43%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H + +A+G DTN L+D R G V GHS+ V ++F +G
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+ + D TV++W + G + HT V V H + S D T F+DL
Sbjct: 164 SAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDVKSQANVAKFDGHVG 400
QV +G P S F+PDG L +G ++L V W+ + +V H G
Sbjct: 221 ----FQVVSC-IEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLV--HWG 273
Query: 401 AVTAISFSEN 410
V ++ N
Sbjct: 274 KVADLAICNN 283
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/154 (25%), Positives = 75/154 (48%)
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P+ LI+ G+ +++WD+++ + GH + ++ F G ++A+ + D +KLW
Sbjct: 74 PEELIVA-GSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
D+R+ K F + F G +LA A+ D ++++ + + K + FP
Sbjct: 133 DIRR-KGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM----MSEFP 186
Query: 484 DLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
TG V+F P+ +A GS DR +R + L
Sbjct: 187 --GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W + + GH V ++ + + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF G ++A S D + ++ ++ C+ + G
Sbjct: 93 EAAKILRTLMGHKANIC--SLDFHPYGEFVASGSQDTNI-KLWDIRRK-GCVFRY---RG 145
Query: 488 TGKAT-CVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+A C++F PD K++A + D ++++ L SE
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 236 (88.1 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 71/268 (26%), Positives = 129/268 (48%)
Query: 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQA 315
+++ TL GH+K ++S KF G T SADKTV++W + D + C+ TL H V
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIW--NMD-HMICERTLTGHKLGVND 134
Query: 316 VTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
+ + ++ V+AS D T +++ +T G F+P ++ +G
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEI-----VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSG 189
Query: 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFR 434
+ + V+IWDVK+ + H V+A+SF+ +G +A+ ++DG V++WD + +
Sbjct: 190 SFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIK 249
Query: 435 SFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKA-DWNCIKTFPDLSGTGKAT- 492
+ D P V F +G Y+ ++ D +++K D++ KT +G +
Sbjct: 250 TLVD-DENPPVAFVKFSPNGKYILASNLD------STLKLWDFSKGKTLKQYTGHENSKY 302
Query: 493 CV--KFG-PDAKYIAVGSMDRNLRVFGL 517
C+ F K+I GS D + ++ L
Sbjct: 303 CIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 190 (71.9 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 56/233 (24%), Positives = 106/233 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+ T D +++ TL+GH V + + ++ ++ S DKT++++ E
Sbjct: 102 LGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIF---EI 158
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
TLK H V + + V+ S D + +D+ +G+C+ + A +D P
Sbjct: 159 VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLP-AHSD--P 215
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKS-QANVAKFDGHVGAVTAISFSENG-YYLA 415
++ +F+ DG ++ +G+ + LV+IWD + Q D V + FS NG Y LA
Sbjct: 216 --VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILA 273
Query: 416 TAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
+ +KLWD K K + + ++ +F +G ++ S D ++Y
Sbjct: 274 SNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 54/224 (24%), Positives = 100/224 (44%)
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
S NY TL+ HT + + KY T+S D T +++ IC ++
Sbjct: 72 SGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLT----- 126
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G G A+ D + + + + +KI+++ + GH V +F+ +
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471
+ + D V++WD++ ++ + P ++V F+ GS +A S D +R++ A+
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSD--PVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 472 VKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ CIKT D A VKF P+ KYI ++D L+++
Sbjct: 245 GQ----CIKTLVDDENPPVAF-VKFSPNGKYILASNLDSTLKLW 283
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 49/205 (23%), Positives = 95/205 (46%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
DI +S D + + D +F+ + ++ TL GH+ V F + L ++GS D+
Sbjct: 134 DIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDE 193
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+VR+W + G C TL H+ V AV+ + + S D +D ++G C+
Sbjct: 194 SVRIWD-VKTGM--CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
+ D + P + F P+G + ++ +K+WD + ++ GH + I
Sbjct: 251 LVD--DENPPVAFVK--FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 406 SFS-ENGYYLATAAHD-GVKLWDLR 428
+FS G ++ + + D + +W+L+
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIWNLQ 331
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ +G D + ++D +G + TL HS V++V F +G L +GS D VR+W +
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW---D 241
Query: 297 DGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
N C TL D V V KY + ++LD+T +D S G L Q + G +
Sbjct: 242 TANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT--GHEN 299
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTA 404
+ G + +G+ + + IW+++++ V +GH V A
Sbjct: 300 SKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA 348
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 236 (88.1 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 71/268 (26%), Positives = 129/268 (48%)
Query: 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQA 315
+++ TL GH+K ++S KF G T SADKTV++W + D + C+ TL H V
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIW--NMD-HMICERTLTGHKLGVND 134
Query: 316 VTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
+ + ++ V+AS D T +++ +T G F+P ++ +G
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEI-----VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSG 189
Query: 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFR 434
+ + V+IWDVK+ + H V+A+SF+ +G +A+ ++DG V++WD + +
Sbjct: 190 SFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIK 249
Query: 435 SFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKA-DWNCIKTFPDLSGTGKAT- 492
+ D P V F +G Y+ ++ D +++K D++ KT +G +
Sbjct: 250 TLVD-DENPPVAFVKFSPNGKYILASNLD------STLKLWDFSKGKTLKQYTGHENSKY 302
Query: 493 CV--KFG-PDAKYIAVGSMDRNLRVFGL 517
C+ F K+I GS D + ++ L
Sbjct: 303 CIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 190 (71.9 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 56/233 (24%), Positives = 106/233 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+ T D +++ TL+GH V + + ++ ++ S DKT++++ E
Sbjct: 102 LGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIF---EI 158
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
TLK H V + + V+ S D + +D+ +G+C+ + A +D P
Sbjct: 159 VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLP-AHSD--P 215
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKS-QANVAKFDGHVGAVTAISFSENG-YYLA 415
++ +F+ DG ++ +G+ + LV+IWD + Q D V + FS NG Y LA
Sbjct: 216 --VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILA 273
Query: 416 TAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS-YLAVASADIRVY 467
+ +KLWD K K + + ++ +F +G ++ S D ++Y
Sbjct: 274 SNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 54/224 (24%), Positives = 100/224 (44%)
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
S NY TL+ HT + + KY T+S D T +++ IC ++
Sbjct: 72 SGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLT----- 126
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G G A+ D + + + + +KI+++ + GH V +F+ +
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471
+ + D V++WD++ ++ + P ++V F+ GS +A S D +R++ A+
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSD--PVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 472 VKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+ CIKT D A VKF P+ KYI ++D L+++
Sbjct: 245 GQ----CIKTLVDDENPPVAF-VKFSPNGKYILASNLDSTLKLW 283
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 49/205 (23%), Positives = 95/205 (46%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
DI +S D + + D +F+ + ++ TL GH+ V F + L ++GS D+
Sbjct: 134 DIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDE 193
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+VR+W + G C TL H+ V AV+ + + S D +D ++G C+
Sbjct: 194 SVRIWD-VKTGM--CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI-- 405
+ D + P + F P+G + ++ +K+WD + ++ GH + I
Sbjct: 251 LVD--DENPPVAFVK--FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 406 SFS-ENGYYLATAAHD-GVKLWDLR 428
+FS G ++ + + D + +W+L+
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIWNLQ 331
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ +G D + ++D +G + TL HS V++V F +G L +GS D VR+W +
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW---D 241
Query: 297 DGNYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
N C TL D V V KY + ++LD+T +D S G L Q + G +
Sbjct: 242 TANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT--GHEN 299
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTA 404
+ G + +G+ + + IW+++++ V +GH V A
Sbjct: 300 SKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA 348
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 219 (82.2 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 62/203 (30%), Positives = 97/203 (47%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
H+ V+S+ G L TG D V +W ++ +C +L HT+ V++V ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESVRLNTPE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V S + +DL + L + G S FHP G + +G+ + +K
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLM-----GHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WD++ + V ++ GH AV + FS +G +LA+AA D VKLWDL K F
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 442 ETPTNSVDFDHSGSYL-AVASAD 463
P N V+F H YL A S+D
Sbjct: 191 --PVNVVEF-HPNEYLLASGSSD 210
Score = 203 (76.5 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 50/184 (27%), Positives = 84/184 (45%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D L+ + +L+GH+ V SV+ T +L + GS ++RVW E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H ++ + S D +D+ C+ + G
Sbjct: 94 AAKI--LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR-----GH 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ F PDG L + + VK+WD+ + +++F GH G V + F N Y LA+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 417 AAHD 420
+ D
Sbjct: 207 GSSD 210
Score = 142 (55.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/153 (23%), Positives = 75/153 (49%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ ++ +++I G + ++D + +I+ TL GH + S+ F G+ +GS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C + H+ V+ + K+ +A+ D+T +DL++G +
Sbjct: 126 DTNIKLWDIRRKG---CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378
++ G G P FHP+ +L +G+S+
Sbjct: 183 SEFP--GHTG-PVNVVE--FHPNEYLLASGSSD 210
Score = 135 (52.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W + + GH V ++ + + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF G ++A S D + ++ ++ C+ + G
Sbjct: 93 EAAKILRTLMGHKANIC--SLDFHPYGEFVASGSQDTNI-KLWDIRRK-GCVFRY---RG 145
Query: 488 TGKAT-CVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+A C++F PD K++A + D ++++ L SE
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Score = 130 (50.8 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/146 (25%), Positives = 70/146 (47%)
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P+ LI+ G+ +++WD+++ + GH + ++ F G ++A+ + D +KLW
Sbjct: 74 PEELIVA-GSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
D+R+ K F + F G +LA A+ D ++++ + + K + FP
Sbjct: 133 DIRR-KGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM----MSEFP 186
Query: 484 DLSGTGKATCVKFGPDAKYIAVGSMD 509
TG V+F P+ +A GS D
Sbjct: 187 --GHTGPVNVVEFHPNEYLLASGSSD 210
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 34/107 (31%), Positives = 51/107 (47%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H + +A+G DTN L+D R G V GHS+ V ++F +G
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTA 328
+ + D TV++W + G + HT V V H N+Y + +
Sbjct: 164 SAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLAS 206
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 242 (90.2 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 77/258 (29%), Positives = 119/258 (46%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
HS V+S+ + G L TG D V VW ++ +C +L HT ++++ + A
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKP---NCVMSLTGHTTPIESLQISAKE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V S + +DL + L + G S FHP G + +G+ + +K
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLL-----GHKANICSLDFHPYGSFVASGSLDTDIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WDV+ + + K+ H AV + FS +G +LA+AA D VKLWDL K FE +
Sbjct: 131 LWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM--FEFTGH 188
Query: 442 ETPTNSVDFDHSGSYLAVA---SADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
P N V+F S YL + S IR + + +CI+ T C+ F P
Sbjct: 189 YGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV-SCIEE----EAT-PVRCILFNP 242
Query: 499 DAKYIAVGSMDRNLRVFG 516
D + G D +LRV+G
Sbjct: 243 DGCCLYGGFQD-SLRVYG 259
Score = 203 (76.5 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 58/234 (24%), Positives = 99/234 (42%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D ++ V +L+GH+ + S++ + +L + GS ++RVW E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H + + SLD +D+ C+ +
Sbjct: 94 AAKI--LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS-----H 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ F PDG L + + VK+WD+ + + +F GH G V + F + YL
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLA 206
Query: 417 AAHDG--VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVY 467
+ ++ WDL K E + TP + F+ G L D +RVY
Sbjct: 207 SGSSSMTIRFWDLEKFHVVSCIE--EEATPVRCILFNPDGCCLYGGFQDSLRVY 258
Score = 175 (66.7 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 50/201 (24%), Positives = 92/201 (45%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
I SL I +++I G + ++D + +I+ TL GH + S+ F G +GS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C K HT V+ + K+ +A+ D+T +DL++G +
Sbjct: 126 DTDIKLWDVRRKG---CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM 182
Query: 346 TQVSDAGTDGRPEGYTSAAFHPD-GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTA 404
+ + G G P FHP +L +G+S ++ WD++ V+ + V
Sbjct: 183 FEFT--GHYG-PVNVVE--FHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRC 237
Query: 405 ISFSENGYYLATAAHDGVKLW 425
I F+ +G L D ++++
Sbjct: 238 ILFNPDGCCLYGGFQDSLRVY 258
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/150 (26%), Positives = 68/150 (45%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W V V GH + ++ S + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF GS++A S D + ++ V+ CI F S
Sbjct: 93 EAAKILRTLLGHKANIC--SLDFHPYGSFVASGSLDTDI-KLWDVRRK-GCI--FKYKSH 146
Query: 488 TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
T C++F PD K++A + D ++++ L
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 47/166 (28%), Positives = 76/166 (45%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H +A+G +DT+ L+D R G I S H++ V ++F +G
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS-HTQAVRCLRFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTA-SLDNTWCFYDLS 340
+ + D TV++W + G + T H V V H + +Y + + S T F+DL
Sbjct: 164 SAADDHTVKLWDLTA-GKVMFEFT--GHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLE 220
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWD 385
++ + + T R F+PDG L G ++L V W+
Sbjct: 221 KFHVVSCIEEEATPVR-----CILFNPDGCCLYGGFQDSLRVYGWE 261
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 241 (89.9 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 70/219 (31%), Positives = 101/219 (46%)
Query: 254 SGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEV 313
SG + TL GHS V F+T+ L+ S D TVR W N + H V
Sbjct: 343 SGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTN---TVLYRGHAYPV 399
Query: 314 QAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG 373
V V + YF TAS D T + + L + G FHP+ +
Sbjct: 400 WDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYA-----GHLSDVDCVKFHPNSNYIA 454
Query: 374 TGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN 432
TG+++ V++W + A+V F GH G V ++FS NG YLA+A D +KLWDL
Sbjct: 455 TGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGL 514
Query: 433 FRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
F+ ++T +S+ F S +A AS D +RV+ +
Sbjct: 515 FKDLRGH-TDT-ISSLSFSQDSSLVASASMDNTVRVWDI 551
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 58/236 (24%), Positives = 98/236 (41%)
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
ED + TL+ H+ V ++ S D+T ++DL S T
Sbjct: 340 EDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKS---FTNTVLYRGHA 396
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA 415
P + P L T + + ++W + + GH+ V + F N Y+A
Sbjct: 397 YPVWDVDVS--PCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIA 454
Query: 416 TAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASV 472
T + D V+LW R+ + R F + P ++ F +G YLA A D ++++ +AS
Sbjct: 455 TGSTDKTVRLWSTRQGASVRLF--TGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASG 512
Query: 473 KADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGLPG--NDAPSE 525
F DL G T + + F D+ +A SMD +RV+ + AP++
Sbjct: 513 GL-------FKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTD 561
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 46/196 (23%), Positives = 78/196 (39%)
Query: 205 DALERYTQLASHP---LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTL 261
D+ RY L S L++ + +D+ +T D A L+ +
Sbjct: 375 DSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLY 434
Query: 262 SGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHAT 321
+GH V VKF + TGS DKTVR+W + + H V +
Sbjct: 435 AGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASV---RLFTGHRGPVLTLAFSPN 491
Query: 322 NKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381
KY +A D +DL+SG + G + +S +F D ++ + + + V
Sbjct: 492 GKYLASAGEDQRLKLWDLASGGLFKDLR-----GHTDTISSLSFSQDSSLVASASMDNTV 546
Query: 382 KIWDVKSQANVAKFDG 397
++WD+++ A DG
Sbjct: 547 RVWDIRNAHGSAPTDG 562
Score = 120 (47.3 bits), Expect = 0.00068, P = 0.00068
Identities = 38/152 (25%), Positives = 66/152 (43%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
H + + IATG D L+ G V +GH V ++ F G + D+ +++
Sbjct: 447 HPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKL 506
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS--GICLTQVS 349
W + G + L+ HT + +++ + +AS+DNT +D+ + G T
Sbjct: 507 WDLASGGLFK---DLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGC 563
Query: 350 DAGTDGRPEGYTS----AAFHPDGLILGTGTS 377
+ G+ G TS F L+L TGT+
Sbjct: 564 SSELIGQYTGSTSNILNVQFMACNLLLVTGTA 595
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 236 (88.1 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 77/298 (25%), Positives = 134/298 (44%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDL 279
K + I SLD S IA+G VD + ++++ +GH VT V+F L
Sbjct: 15 KGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHL 74
Query: 280 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDL 339
+ S DKTVR+W S G + HT V++V A + +TAS D + + +
Sbjct: 75 LASSSRDKTVRLWVPSVKGE---SVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSV 131
Query: 340 SSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHV 399
+ + + R A F PDG ++ + + + VK+WD S+ + F
Sbjct: 132 HRQKIICTLREHNNWVR-----CARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPG 186
Query: 400 GAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLA 458
G + + F + +ATA+ D V++WD+R + ++ + N++ F SG++L
Sbjct: 187 GYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAV--NALSFHPSGNHLL 244
Query: 459 VASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
AS+D + ++ + + + T L G G A+CV F A D+ + V+
Sbjct: 245 TASSDSTL-KILDL-LEGRLLYT---LHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 61/259 (23%), Positives = 102/259 (39%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH +TS+ F G +GS D +V VW + H V V +
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSR---AYRFTGHKDAVTCVQFSPSA 72
Query: 323 KYFVTASLDNTWCFYDLS-SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381
++S D T + S G + + G+ S F DG L T + + +
Sbjct: 73 HLLASSSRDKTVRLWVPSVKGESVLFRAHTGS------VRSVCFSADGQSLLTASDDQSI 126
Query: 382 KIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD 440
K+W V Q + H V FS +G + + + D VKLWD + +F +
Sbjct: 127 KLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTF--CE 184
Query: 441 SETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
++ VDF S + +A AS+D +RV+ + + ++ + S A + F P
Sbjct: 185 PGGYSSYVDFHPSSTCIATASSDNTVRVWDIRT----HTLLQHYQVHSAAVNA--LSFHP 238
Query: 499 DAKYIAVGSMDRNLRVFGL 517
++ S D L++ L
Sbjct: 239 SGNHLLTASSDSTLKILDL 257
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 217 (81.4 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 258 VTTLSGHSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAV 316
V + H+ V+S+ G L TG D V +W ++ +C +L HT+ V++V
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESV 73
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
++ + V S + +DL + L + G S FHP G + +G+
Sbjct: 74 RLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-----GHKANICSLDFHPYGEFVASGS 128
Query: 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435
+ +K+WD++ + V ++ GH AV + FS +G +LA+AA D VKLWDL K
Sbjct: 129 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 188
Query: 436 FESSDSETPTNSVDFDHSGSYL 457
F P N V+F H YL
Sbjct: 189 FPGHTG--PVNVVEF-HPNEYL 207
Score = 192 (72.6 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D L+ + +L+GH+ V SV+ T +L + GS ++RVW E
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-LE 97
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H ++ + S D +D+ C+ + G
Sbjct: 98 AAKI--LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR-----GH 150
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
+ F PDG L + + VK+WD+ + +++F GH G V + F N Y L
Sbjct: 151 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 208
Score = 135 (52.6 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W + + GH V ++ + + + G +++WDL
Sbjct: 37 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 96
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF G ++A S D + ++ ++ C+ + G
Sbjct: 97 EAAKILRTLMGHKANIC--SLDFHPYGEFVASGSQDTNI-KLWDIRRK-GCVFRY---RG 149
Query: 488 TGKAT-CVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+A C++F PD K++A + D ++++ L SE
Sbjct: 150 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 188
Score = 128 (50.1 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 34/147 (23%), Positives = 70/147 (47%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ ++ +++I G + ++D + +I+ TL GH + S+ F G+ +GS
Sbjct: 70 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 129
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C + H+ V+ + K+ +A+ D+T +DL++G +
Sbjct: 130 DTNIKLWDIRRKG---CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 186
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLIL 372
++ G G P FHP+ +L
Sbjct: 187 SEFP--GHTG-PVNVVE--FHPNEYLL 208
Score = 114 (45.2 bits), Expect = 0.00036, P = 0.00036
Identities = 34/105 (32%), Positives = 50/105 (47%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H + +A+G DTN L+D R G V GHS+ V ++F +G
Sbjct: 109 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLA 167
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV 326
+ + D TV++W + G + HT V V H N+Y +
Sbjct: 168 SAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLL 208
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 229 (85.7 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 73/286 (25%), Positives = 134/286 (46%)
Query: 239 ATGGVDTNA-VLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+TG T+ V +P + TL GH+ ++ VKF +G+L + S DKT+ +W +
Sbjct: 17 STGNAGTSGNVPIYKPYRHL-KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSAT-- 73
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGI-CLTQVSDAGTDGR 356
NY H + H++ + + + + Y +AS D T +D S CL + G
Sbjct: 74 -NYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLR-----GH 127
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
F+P ++ +G+ + ++IW+VK+ V H ++++ F+ +G + +
Sbjct: 128 TNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVS 187
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSETPTNS-VDFDHSGSYLAVASADIRVYQVASVKA 474
A+HDG K+WD ++ ++ D ++P S F +G ++ VA+ D + S A
Sbjct: 188 ASHDGSCKIWDAKEGTCLKTL--IDDKSPAVSFAKFSPNGKFILVATLDSTLK--LSNYA 243
Query: 475 DWNCIKTFPDLSGTGKATCVK--FG-PDAKYIAVGSMDRNLRVFGL 517
+K + T K C+ F + KYI GS D + ++ L
Sbjct: 244 TGKFLKVYT--GHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDL 287
Score = 187 (70.9 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 57/206 (27%), Positives = 97/206 (47%)
Query: 228 SLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
S D HY+ + D ++D R + + L GH+ V V F +L ++GS D
Sbjct: 94 SSDSHYT----CSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT 346
+T+R+W+ + G C +K H+ + +V + V+AS D + +D G CL
Sbjct: 150 ETIRIWE-VKTGK--CVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLK 206
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
+ D D P + A F P+G + T ++ +K+ + + + + GH V I+
Sbjct: 207 TLID---DKSP-AVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCIT 262
Query: 407 --FS-ENGYYLATAAHDG-VKLWDLR 428
FS NG Y+ + + D V LWDL+
Sbjct: 263 SAFSVTNGKYIVSGSEDNCVYLWDLQ 288
Score = 185 (70.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 56/242 (23%), Positives = 106/242 (43%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+ +S D ++A+ VD +L+ + ++ GHS ++ + + ++ + S D T
Sbjct: 49 VKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCT 108
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
+R+W Y+C L+ HT V V + + V+ S D T +++ +G C+ +
Sbjct: 109 LRIWDARSP--YECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMI 166
Query: 349 SDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKF-DGHVGAVTAISF 407
P +S F+ DG ++ + + + KIWD K + D AV+ F
Sbjct: 167 K---AHSMP--ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKF 221
Query: 408 SENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFD-HSGSYLAVASADIR 465
S NG ++ A D +KL + K + + ++ + F +G Y+ S D
Sbjct: 222 SPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNC 281
Query: 466 VY 467
VY
Sbjct: 282 VY 283
Score = 162 (62.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 43/172 (25%), Positives = 87/172 (50%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++I +G D +++ +G+ V + HS ++SV F +G L ++ S D + ++W
Sbjct: 141 NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
E G C TL D + + + N K+ + A+LD+T + ++G L + G
Sbjct: 201 E-GT--CLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYT--GHT 255
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
+ TSA +G + +G+ + V +WD++++ + + +GH AV ++S
Sbjct: 256 NKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVS 307
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 225 (84.3 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 68/246 (27%), Positives = 116/246 (47%)
Query: 230 DIHYSKDV--IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ +S D I + D L+D +G ++ TL GH+ V F + ++ ++GS D+
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDE 135
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
TVR+W + G C L H+ V AV + V++S D +D +G C+
Sbjct: 136 TVRIWDVTT-GK--CLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS- 406
+ D D P + F P+G + GT + +++W++ S + + GHV A IS
Sbjct: 193 LID---DENPP-VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISS 248
Query: 407 -FS-ENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
FS NG + + + D V +W+L K + E +ET N V + + +A S D
Sbjct: 249 AFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGH-TETVMN-VACHPTENLIASGSLD 306
Query: 464 --IRVY 467
+R++
Sbjct: 307 KTVRIW 312
Score = 209 (78.6 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 55/219 (25%), Positives = 108/219 (49%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS--EDGNYDCKHTLKDHTAEVQAVT 317
TL+ H++ V+SVKF ++G L + SADKT+R + + D + H + V
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ ++ V+AS D T +D+ +G + + G F+P ++ +G+
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLI-----GHTNYAFCVNFNPQSNMIVSGSF 133
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSF 436
+ V+IWDV + + H VTA+ F+ +G + ++++DG+ ++WD ++
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVK 473
D P + V F +G ++ V + D +R++ ++S K
Sbjct: 194 -IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK 231
Score = 191 (72.3 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 52/222 (23%), Positives = 101/222 (45%)
Query: 300 YDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS-GICLTQVSDAGTDGRPE 358
Y TL H V +V + + +AS D T Y +++ + + T G
Sbjct: 14 YVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFT-GHEN 72
Query: 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418
G + AF D + + + + +K+WDV++ + + GH ++F+ + + +
Sbjct: 73 GISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGS 132
Query: 419 HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKAD 475
D V++WD+ K + + P +VDF+ GS + +S D R++ +
Sbjct: 133 FDETVRIWDVTTGKCLKVLPAHSD--PVTAVDFNRDGSLIVSSSYDGLCRIWDSGT---- 186
Query: 476 WNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+C+KT D + V+F P+ K+I VG++D LR++ +
Sbjct: 187 GHCVKTLID-DENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Score = 133 (51.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 48/180 (26%), Positives = 79/180 (43%)
Query: 217 PLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTL-SGHSKKVTSVKFVT 275
P H S P + ++D + +I + D ++D +G V TL + V+ V+F
Sbjct: 152 PAH--SDP-VTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP 208
Query: 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAV-----TVHATN-KYFVTAS 329
G L G+ D T+R+W N LK +T V A TN K V+ S
Sbjct: 209 NGKFILVGTLDNTLRLW------NISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGS 262
Query: 330 LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQ 389
DN ++L+S L ++ +G E + A HP ++ +G+ + V+IW K +
Sbjct: 263 EDNCVHMWELNSKKLLQKL-----EGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 234 (87.4 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 74/252 (29%), Positives = 113/252 (44%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH VTSV+F G+L + S D+TVR+W + G + K HTA V++V A
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFS---EFKAHTAPVRSVDFSADG 72
Query: 323 KYFVTASLDNT---WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
++ TAS D + W Y L + A F PDG ++ + + +
Sbjct: 73 QFLATASEDKSIKVWSMYRQRFLYSLYR--------HTHWVRCAKFSPDGRLIVSCSEDK 124
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438
+KIWD ++ V F VG + F+ +G +A+A D VK+WD+R K + ++
Sbjct: 125 TIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 184
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFG 497
N + F SG+YL AS+D ++ + + I T L G TG V F
Sbjct: 185 HSGGV--NCISFHPSGNYLITASSD-GTLKILDL-LEGRLIYT---LQGHTGPVFTVSFS 237
Query: 498 PDAKYIAVGSMD 509
+ A G D
Sbjct: 238 KGGELFASGGAD 249
Score = 209 (78.6 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 63/246 (25%), Positives = 106/246 (43%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLT 282
K + S+ +++A+ D L+ + H+ V SV F +G T
Sbjct: 18 KDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLAT 77
Query: 283 GSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG 342
S DK+++VW ++L HT V+ + V+ S D T +D ++
Sbjct: 78 ASEDKSIKVWSMYRQRFL---YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 134
Query: 343 ICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
C+ SD+ G+ + F+P G + + S+ VK+WDV+ + + H G
Sbjct: 135 QCVNNFSDS------VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 188
Query: 402 VTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVA 460
V ISF +G YL TA+ DG +K+ DL + + + + P +V F G A
Sbjct: 189 VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG--PVFTVSFSKGGELFASG 246
Query: 461 SADIRV 466
AD +V
Sbjct: 247 GADTQV 252
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+W+ K A ++ GH VT++ FS +G LA+A+ D V+LW K F F++ +
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 442 ETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKT---FPDLSGTGKATCVKFGP 498
P SVDF G +LA AS D S+K W+ + + T C KF P
Sbjct: 62 --PVRSVDFSADGQFLATASED------KSIKV-WSMYRQRFLYSLYRHTHWVRCAKFSP 112
Query: 499 DAKYIAVGSMDRNLRVF 515
D + I S D+ ++++
Sbjct: 113 DGRLIVSCSEDKTIKIW 129
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG 421
S F DG L T + + +K+W + Q + H V FS +G + + + D
Sbjct: 65 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 124
Query: 422 -VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIK 480
+K+WD + +F SDS N VDF+ SG+ +A A +D V +V V+ + ++
Sbjct: 125 TIKIWDTTNKQCVNNF--SDSVGFANFVDFNPSGTCIASAGSDQTV-KVWDVRVN-KLLQ 180
Query: 481 TFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+ SG G C+ F P Y+ S D L++ L
Sbjct: 181 HYQVHSG-G-VNCISFHPSGNYLITASSDGTLKILDL 215
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/169 (24%), Positives = 73/169 (43%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G + TS F P G +L + + + V++W + ++F H V ++ FS +G +L
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 75
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471
ATA+ D +K+W + + + S F G + S D I+++ +
Sbjct: 76 ATASEDKSIKVWSMYRQRFLYSLYRHTHWV--RCAKFSPDGRLIVSCSEDKTIKIWDTTN 133
Query: 472 VKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN 520
+ C+ F D G A V F P IA D+ ++V+ + N
Sbjct: 134 KQ----CVNNFSD--SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 176
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 29/99 (29%), Positives = 47/99 (47%)
Query: 209 RYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKV 268
R +L H ++ G+ + H S + + T D + D G+++ TL GH+ V
Sbjct: 174 RVNKLLQH--YQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 231
Query: 269 TSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK 307
+V F G+LF +G AD V +W+ + D CK K
Sbjct: 232 FTVSFSKGGELFASGGADTQVLLWRTNFD-ELHCKGLTK 269
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 236 (88.1 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 73/255 (28%), Positives = 117/255 (45%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
HS V+S+ + G L TG D V VW ++ +C +L HT ++++ + A
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKP---NCVMSLTGHTTPIESLQISAKE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V S + +DL + L + G S FHP G + +G+ + +K
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLL-----GHKANICSLDFHPYGSFVASGSLDTDIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WDV+ + + K+ H AV + FS +G +LA+AA D VKLWDL K FE +
Sbjct: 131 LWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM--FEFTGH 188
Query: 442 ETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAK 501
P N V+F H Y S R + ++ ++ + + T C+ F PD
Sbjct: 189 YGPVNVVEF-HPSEYPLAGSPVHRTIRFWDLEK-FHVVSCIEE-EAT-PVRCILFNPDGC 244
Query: 502 YIAVGSMDRNLRVFG 516
+ G D +LRV+G
Sbjct: 245 CLYGGFQD-SLRVYG 258
Score = 215 (80.7 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 60/233 (25%), Positives = 101/233 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D ++ V +L+GH+ + S++ + +L + GS ++RVW E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H + + SLD +D+ C+ +
Sbjct: 94 AAKI--LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS-----H 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA- 415
+ F PDG L + + VK+WD+ + + +F GH G V + F + Y LA
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAG 206
Query: 416 TAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVY 467
+ H ++ WDL K E + TP + F+ G L D +RVY
Sbjct: 207 SPVHRTIRFWDLEKFHVVSCIE--EEATPVRCILFNPDGCCLYGGFQDSLRVY 257
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/200 (24%), Positives = 87/200 (43%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
I SL I +++I G + ++D + +I+ TL GH + S+ F G +GS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C K HT V+ + K+ +A+ D+T +DL++G +
Sbjct: 126 DTDIKLWDVRRKG---CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM 182
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
+ + G G P FHP L ++ WD++ V+ + V I
Sbjct: 183 FEFT--GHYG-PVNVVE--FHPSEYPLAGSPVHRTIRFWDLEKFHVVSCIEEEATPVRCI 237
Query: 406 SFSENGYYLATAAHDGVKLW 425
F+ +G L D ++++
Sbjct: 238 LFNPDGCCLYGGFQDSLRVY 257
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/150 (26%), Positives = 68/150 (45%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W V V GH + ++ S + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF GS++A S D + ++ V+ CI F S
Sbjct: 93 EAAKILRTLLGHKANIC--SLDFHPYGSFVASGSLDTDI-KLWDVRRK-GCI--FKYKSH 146
Query: 488 TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
T C++F PD K++A + D ++++ L
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 122 (48.0 bits), Expect = 0.00047, P = 0.00047
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H +A+G +DT+ L+D R G I S H++ V ++F +G
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS-HTQAVRCLRFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+ + D TV++W + G + T H V V H + + + T F+DL
Sbjct: 164 SAADDHTVKLWDLTA-GKVMFEFT--GHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEK 220
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWD 385
++ + + T R F+PDG L G ++L V W+
Sbjct: 221 FHVVSCIEEEATPVR-----CILFNPDGCCLYGGFQDSLRVYGWE 260
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 228 (85.3 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 68/251 (27%), Positives = 114/251 (45%)
Query: 237 VIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++A+ D + L+D + S + + T+ GH V+SV FV GD L+ S D+T+++W+ +
Sbjct: 164 LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVA 223
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFYDLSSGI--- 343
Y C T H V+ V VH F T S D T W C +L
Sbjct: 224 T--GY-CVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTV 280
Query: 344 -CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
C+ +A E G + H G L +G+ + ++IWDV + GH
Sbjct: 281 ECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDN 340
Query: 401 AVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAV 459
V ++F G YL +A+ D +++WDLR + ++ + S+DF + Y+
Sbjct: 341 WVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFC--TSIDFHKAHPYVIS 398
Query: 460 ASAD--IRVYQ 468
S D ++V++
Sbjct: 399 GSVDQTVKVWE 409
Score = 189 (71.6 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 67/302 (22%), Positives = 132/302 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ + D ++D +G+ +L GH+ V V F +G L + SAD ++++W +
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQ 181
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
+Y+C T+ H V +V Y ++AS D T +++++G C+ + G
Sbjct: 182 --SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYT-----GH 234
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-------- 408
E H +G I T +++ +++W S+ + H V I+++
Sbjct: 235 REWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAI 294
Query: 409 ------EN------GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+N G +LA+ + D +++WD+ + D+ + F G
Sbjct: 295 NEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWV--RGLAFHPGGK 352
Query: 456 YLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLR 513
YL AS D IRV+ + + + C+KT + T + F Y+ GS+D+ ++
Sbjct: 353 YLVSASDDKTIRVWDLRNKR----CMKTL--YAHQHFCTSIDFHKAHPYVISGSVDQTVK 406
Query: 514 VF 515
V+
Sbjct: 407 VW 408
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 76/281 (27%), Positives = 122/281 (43%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
+L+GH +T V F L ++ S D T+R+W E G Y+ +LK HT VQ V
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWD-FETGEYE--RSLKGHTDSVQDVAFD 159
Query: 320 ATNKYFVTASLDNTWCFYDLSSGI-CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378
A K + S D + +D C+ + G +S AF P G + + + +
Sbjct: 160 AQGKLLASCSADLSIKLWDFQQSYECIKTMH-----GHDHNVSSVAFVPAGDYVLSASRD 214
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLW--DLRKLK-NFR 434
+K+W+V + V + GH V + G AT ++D +++W + + K R
Sbjct: 215 RTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELR 274
Query: 435 SFESSDS------ETPTNSVD----FD-----HSGSYLAVASAD--IRVYQVASVKADWN 477
E + E ++++ D H G +LA S D IR++ V SV
Sbjct: 275 DHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDV-SVGL--- 330
Query: 478 CIKTFPDLSGTGK-ATCVKFGPDAKYIAVGSMDRNLRVFGL 517
C+ T LSG + F P KY+ S D+ +RV+ L
Sbjct: 331 CLLT---LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 54/209 (25%), Positives = 93/209 (44%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
D + + D +++ +G V T +GH + V V+ EG +F T S D+T+RVW +
Sbjct: 206 DYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTN 265
Query: 296 EDGNYDCKHTLKDHTAEVQAVT---VHATNKYFVTASLDNTWCFYD---LSSG-----IC 344
DCK L+DH V+ + A + A DN + L+SG I
Sbjct: 266 SK---DCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIR 322
Query: 345 LTQVSDA----GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+ VS G AFHP G L + + + +++WD++++ + H
Sbjct: 323 IWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQH 382
Query: 401 AVTAISFSE-NGYYLATAAHDGVKLWDLR 428
T+I F + + Y ++ + VK+W+ R
Sbjct: 383 FCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 144 (55.7 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 45/176 (25%), Positives = 82/176 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A ++IWD ++ GH +V ++F G L
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 415 ATAAHD-GVKLWDLRK-LKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVA 470
A+ + D +KLWD ++ + ++ D +SV F +G Y+ AS D I++++VA
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNV--SSVAFVPAGDYVLSASRDRTIKMWEVA 223
Query: 471 SVKADWNCIKTFPDLSGTGK-ATCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KT+ +G + V+ + A S D+ +RV+ D E
Sbjct: 224 T----GYCVKTY---TGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVE 272
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 31/102 (30%), Positives = 48/102 (47%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
H+ +A+G D ++D G + TLSGH V + F G ++ S DKT+RV
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT 333
W + N C TL H ++ H + Y ++ S+D T
Sbjct: 366 W---DLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQT 404
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 49/207 (23%), Positives = 85/207 (41%)
Query: 303 KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362
K +L H A + V H V+AS D T +D +G + G +
Sbjct: 101 KFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETG-----EYERSLKGHTDSVQD 155
Query: 363 AAFHPDGLILGTGTSEALVKIWDVKSQANVAK-FDGHVGAVTAISFSENGYYLATAAHDG 421
AF G +L + +++ +K+WD + K GH V++++F G Y+ +A+ D
Sbjct: 156 VAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDR 215
Query: 422 -VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNC 478
+K+W++ +++ V + GS A S D IRV+ S +C
Sbjct: 216 TIKMWEVATGYCVKTYTGHREWVRMVRVHIE--GSIFATCSNDQTIRVWLTNSK----DC 269
Query: 479 IKTFPDLSGTGKATCVKFGPDAKYIAV 505
D T C+ + P+A A+
Sbjct: 270 KVELRDHEHT--VECIAWAPEAAASAI 294
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 216 (81.1 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 65/226 (28%), Positives = 112/226 (49%)
Query: 305 TLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG-ICLTQVSDAGTDGRPEGYTSA 363
+L+ H+ V + H +Y T+S D +W +DL SG CL +G +G
Sbjct: 382 SLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLD-----QEGHSDGVMGI 436
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-V 422
+ DG +L TG+ + LV+IWD++S + F GH V ++ +S NGY LA+++ D V
Sbjct: 437 SIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGYQLASSSEDNTV 496
Query: 423 KLWDLRKLKNFRSFESSDS----------ETPTNSVDFDHS-G--SYLAVASADIRVYQV 469
+WD+RK + + +S T TN+ + + S G +YLA S D ++ +
Sbjct: 497 VIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKI-KT 555
Query: 470 ASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
S W+ + TF S K T + ++K ++ S D+ +++
Sbjct: 556 WSPNT-WSPLATFEGHSS--KVTSIDL-TNSKILST-SFDKTWKIW 596
Score = 144 (55.7 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 51/214 (23%), Positives = 82/214 (38%)
Query: 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQA 315
Q + +L GHS V F G T S DK+ R+W G C + H+ V
Sbjct: 378 QPILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGK--CLLDQEGHSDGVMG 435
Query: 316 VTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
+++ + T S D +DL SG + G + S + P+G L +
Sbjct: 436 ISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQ-----GHSKQVISVDWSPNGYQLASS 490
Query: 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGY---------------YLATAAHD 420
+ + V IWD++ + + H V+ + F + YLAT + D
Sbjct: 491 SEDNTVVIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFD 550
Query: 421 G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453
G +K W +FE S+ S+D +S
Sbjct: 551 GKIKTWSPNTWSPLATFEGHSSKV--TSIDLTNS 582
Score = 117 (46.2 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 50/203 (24%), Positives = 83/203 (40%)
Query: 238 IATGGVDTNAVLFDRPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
I T D + L+D SG + + GHS V + ++G L TGS D VR+W
Sbjct: 402 ITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQSDGSLLATGSQDGLVRIWD-LR 460
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDL------------SSGIC 344
G + H+ +V +V ++S DNT +D+ +S +
Sbjct: 461 SGRPILY--FQGHSKQVISVDWSPNGYQLASSSEDNTVVIWDIRKKEQSCQILAHNSIVS 518
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLI--LGTGTSEALVKIWDVKSQANVAKFDGHVGAV 402
+ T S+ P G + L T + + +K W + + +A F+GH V
Sbjct: 519 CVKFQKQSTQTNNNNNNSS---P-GCVNYLATCSFDGKIKTWSPNTWSPLATFEGHSSKV 574
Query: 403 TAISFSENGYYLATAAHDGVKLW 425
T+I + N L+T+ K+W
Sbjct: 575 TSIDLT-NSKILSTSFDKTWKIW 596
Score = 52 (23.4 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 254 SGQIVTTLSGHSKKVTSVKFVT----EGDL------FLTGSADKTVRVWQGSEDGNYDCK 303
SGQ L+GHS++V+ + + +G+ T SAD T ++W + N +
Sbjct: 299 SGQKKQILAGHSQRVSCIAYHPLSGIDGNHTKNLVNIATTSADSTCKLWPLLNNDNNNNN 358
Query: 304 HTLKDHTAEVQAVTV 318
+ D+ E TV
Sbjct: 359 NNNNDNEEEDNDATV 373
Score = 48 (22.0 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 77 QNEWDGLMLSNFALE--QQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSE 133
Q + +G NF E ++L TAR +S +Y + + + LKK+R+ S+ +++
Sbjct: 130 QEQLEGSDEENFLTEGTEELKTARINIS--IYSLKKSQQRLLHLKKQREIELSIQKEND 186
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 232 (86.7 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 77/259 (29%), Positives = 118/259 (45%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTL-KDHTAEVQAVTVHAT 321
HS V+S+ + G L TG D V VW ++ +H L HT ++++ + A
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQ-----LRHDLLTGHTTPIESLQISAK 73
Query: 322 NKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381
+ V S + +DL + L + G S FHP G + +G+ + +
Sbjct: 74 EELIVAGSQSGSIRVWDLEAAKILRTLL-----GHKANICSLDFHPYGSFVASGSLDTDI 128
Query: 382 KIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD 440
K+WDV+ + + K+ H AV + FS +G +LA+AA D VKLWDL K FE +
Sbjct: 129 KLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM--FEFTG 186
Query: 441 SETPTNSVDFDHSGSYLAVA---SADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
P N V+F S YL + S IR + + +CI+ T C+ F
Sbjct: 187 HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVV-SCIEE----EAT-PVRCILFN 240
Query: 498 PDAKYIAVGSMDRNLRVFG 516
PD + G D +LRV+G
Sbjct: 241 PDGCCLYGGFQD-SLRVYG 258
Score = 187 (70.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/235 (24%), Positives = 99/235 (42%)
Query: 237 VIATGGVDTNAVLFDRPSGQIV-TTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
++ATGG D ++ Q+ L+GH+ + S++ + +L + GS ++RVW
Sbjct: 35 LLATGGDDCRVNVWS--VAQLRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWD-L 91
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
E TL H A + ++ H + + SLD +D+ C+ +
Sbjct: 92 EAAKI--LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS----- 144
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA 415
+ F PDG L + + VK+WD+ + + +F GH G V + F + YL
Sbjct: 145 HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLL 204
Query: 416 TAAHDG--VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVY 467
+ ++ WDL K E + TP + F+ G L D +RVY
Sbjct: 205 ASGSSSMTIRFWDLEKFHVVSCIE--EEATPVRCILFNPDGCCLYGGFQDSLRVY 257
Score = 175 (66.7 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 50/201 (24%), Positives = 92/201 (45%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
I SL I +++I G + ++D + +I+ TL GH + S+ F G +GS
Sbjct: 65 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 124
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C K HT V+ + K+ +A+ D+T +DL++G +
Sbjct: 125 DTDIKLWDVRRKG---CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM 181
Query: 346 TQVSDAGTDGRPEGYTSAAFHPD-GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTA 404
+ + G G P FHP +L +G+S ++ WD++ V+ + V
Sbjct: 182 FEFT--GHYG-PVNVVE--FHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRC 236
Query: 405 ISFSENGYYLATAAHDGVKLW 425
I F+ +G L D ++++
Sbjct: 237 ILFNPDGCCLYGGFQDSLRVY 257
Score = 138 (53.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 39/150 (26%), Positives = 69/150 (46%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W V +Q GH + ++ S + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNVWSV-AQLRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 91
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF GS++A S D + ++ V+ CI F S
Sbjct: 92 EAAKILRTLLGHKANIC--SLDFHPYGSFVASGSLDTDI-KLWDVRRK-GCI--FKYKSH 145
Query: 488 TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
T C++F PD K++A + D ++++ L
Sbjct: 146 TQAVRCLRFSPDGKWLASAADDHTVKLWDL 175
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 47/166 (28%), Positives = 76/166 (45%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H +A+G +DT+ L+D R G I S H++ V ++F +G
Sbjct: 104 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS-HTQAVRCLRFSPDGKWLA 162
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTA-SLDNTWCFYDLS 340
+ + D TV++W + G + T H V V H + +Y + + S T F+DL
Sbjct: 163 SAADDHTVKLWDLTA-GKVMFEFT--GHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLE 219
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWD 385
++ + + T R F+PDG L G ++L V W+
Sbjct: 220 KFHVVSCIEEEATPVR-----CILFNPDGCCLYGGFQDSLRVYGWE 260
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 207 (77.9 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 50/173 (28%), Positives = 87/173 (50%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G + S A+ PDG + T + + +K+WD+ S +A F+ H +VTA+ F++ G +
Sbjct: 343 GHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVM 402
Query: 415 ATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
+++ DG V+ WDL + +NFR+F ++ N + D SG + S D V SV+
Sbjct: 403 FSSSLDGTVRAWDLIRYRNFRTFTGTE-RIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQ 461
Query: 474 ADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ LSG G +C+ F + +A S D+ +R++ + G E
Sbjct: 462 TG----QLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVE 510
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/203 (23%), Positives = 94/203 (46%)
Query: 228 SLDIHYSKDVIATGGVDTNAVL-FDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
++ ++ + + +A G +L ++ S + GH S+ + +G +T S D
Sbjct: 307 TVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASED 366
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT 346
++VW + C T ++HT+ V AV + ++SLD T +DL
Sbjct: 367 GKIKVWDITSGF---CLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFR 423
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDVKSQANVAKFDGHVGAVTAI 405
+ GT+ R + + A P G ++ G+ + + +W V++ + GH G V+ +
Sbjct: 424 TFT--GTE-RIQ-FNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCL 479
Query: 406 SFSENGYYLATAAHDG-VKLWDL 427
SFS+ LA+A+ D +++W +
Sbjct: 480 SFSQENSVLASASWDKTIRIWSI 502
Score = 152 (58.6 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 51/212 (24%), Positives = 94/212 (44%)
Query: 303 KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362
KH + A+V+ VT H + + YDL + Q+S G + P S
Sbjct: 253 KHFFYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLS-MGQN--PVNTVS 309
Query: 363 AAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG- 421
+ L G+ L+ +++ +S++ + K GH + ++++S +G + TA+ DG
Sbjct: 310 VNQTGEWLAFGSSKLGQLL-VYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGK 368
Query: 422 VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIK- 480
+K+WD+ +FE S +V F G + +S D +V+A W+ I+
Sbjct: 369 IKVWDITSGFCLATFEEHTSSV--TAVQFAKRGQVMFSSSLD------GTVRA-WDLIRY 419
Query: 481 -TFPDLSGTGKA--TCVKFGPDAKYIAVGSMD 509
F +GT + C+ P + + GS+D
Sbjct: 420 RNFRTFTGTERIQFNCLAVDPSGEVVCAGSLD 451
Score = 143 (55.4 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 63/294 (21%), Positives = 114/294 (38%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA---DKT 288
H + ++A G L+D P ++ LS V +V G+ GS+
Sbjct: 269 HPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLL 328
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
V WQ SE +Y K + H ++ VTAS D +D++SG CL
Sbjct: 329 VYEWQ-SE--SYILKQ--QGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATF 383
Query: 349 SDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISF 407
+ T+ F G ++ + + + V+ WD+ N F G ++
Sbjct: 384 EE-----HTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAV 438
Query: 408 SENGYYLATAAHDG--VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-- 463
+G + + D + +W ++ + + S E P + + F S LA AS D
Sbjct: 439 DPSGEVVCAGSLDNFDIHVWSVQTGQLLDAL--SGHEGPVSCLSFSQENSVLASASWDKT 496
Query: 464 IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
IR++ + I+ + D+ + PD K +AV ++ + +F +
Sbjct: 497 IRIWSIFGRSQQVEPIEVYSDV------LALSMRPDGKEVAVSTLKGQISIFNI 544
Score = 122 (48.0 bits), Expect = 0.00071, P = 0.00071
Identities = 47/204 (23%), Positives = 86/204 (42%)
Query: 233 YSKDV--IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
YS D + T D ++D SG + T H+ VT+V+F G + + S D TVR
Sbjct: 353 YSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVR 412
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT-QVS 349
W N+ + + + V + + SLDN +D+ T Q+
Sbjct: 413 AWDLIRYRNF--RTFTGTERIQFNCLAVDPSGEVVCAGSLDN----FDIHVWSVQTGQLL 466
Query: 350 DAGTDGRPEGYTSA-AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS 408
DA G EG S +F + +L + + + ++IW + ++ + V A+S
Sbjct: 467 DA-LSGH-EGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLALSMR 524
Query: 409 ENGYYLATAAHDG-VKLWDLRKLK 431
+G +A + G + ++++ K
Sbjct: 525 PDGKEVAVSTLKGQISIFNIEDAK 548
Score = 76 (31.8 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 30/134 (22%), Positives = 50/134 (37%)
Query: 209 RYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQ---IVTTLSGHS 265
++ H +H I SL I T D +A ++ S + TT +GH
Sbjct: 132 QFAPFVRHRVHAGHFQDITSLTWSQDSRFILTTSKDLSAKIWSVDSEEKNLAATTFNGHR 191
Query: 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQ----GSEDGNYDCKHTLKDHTAEVQAVTVHAT 321
V F + + T S D V VW+ S+D + + + K ++ + T
Sbjct: 192 DYVMGAFFSHDQEKIYTVSKDGAVFVWEFTKRPSDDDDNESEDDDKQEEVDISKYSWRIT 251
Query: 322 NKYFVTASLDNTWC 335
K+F A+ C
Sbjct: 252 KKHFFYANQAKVKC 265
Score = 70 (29.7 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 31/170 (18%), Positives = 77/170 (45%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLT 282
+ I ++D++ ++ + D A+L + + ++ + +K ++VKF +G LF
Sbjct: 55 RKNIAAIDLNKQGTLLISIDEDGRAILVNFKARNVLHHFN-FKEKCSAVKFSPDGRLFAL 113
Query: 283 GSADKTVRVWQGSEDGNYD------CKHTLK-DHTAEVQAVTVHATNKYFVTASLDNTWC 335
S + +++W+ + D N D +H + H ++ ++T +++ +T S D +
Sbjct: 114 ASG-RFLQIWK-TPDVNKDRQFAPFVRHRVHAGHFQDITSLTWSQDSRFILTTSKDLSAK 171
Query: 336 FYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWD 385
+ + S ++ +G + A F D + T + + V +W+
Sbjct: 172 IWSVDSEE--KNLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFVWE 219
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 230 (86.0 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 64/224 (28%), Positives = 110/224 (49%)
Query: 218 LHKTSKPGIVSLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKK------VT 269
LH ++ + +S D +ATG + A++F+ +G+++T L S K V
Sbjct: 293 LHTLEHTSVICY-VRFSADGKFLATG-CNRAAMVFNVETGKLITLLQEESSKREGDLYVR 350
Query: 270 SVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS 329
SV F +G TG D+ +R+W ++ Y L H E+ ++ K V+ S
Sbjct: 351 SVAFSPDGKYLATGVEDQQIRIWDIAQKRVY---RLLTGHEQEIYSLDFSKDGKTLVSGS 407
Query: 330 LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQ 389
D T C +D+ +G Q TD +G T+ F PDG + G+ + +++IW S
Sbjct: 408 GDRTVCLWDVEAG---EQKLILHTD---DGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSG 460
Query: 390 ANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN 432
V + GH +V +++FS +G YL + + D +KLW+L+ + N
Sbjct: 461 TLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSN 504
Score = 204 (76.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 62/227 (27%), Positives = 106/227 (46%)
Query: 304 HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYT-S 362
HTL +HT+ + V A K+ T + +++ +G +T + + + + Y S
Sbjct: 294 HTL-EHTSVICYVRFSADGKFLATGC-NRAAMVFNVETGKLITLLQEESSKREGDLYVRS 351
Query: 363 AAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG- 421
AF PDG L TG + ++IWD+ + GH + ++ FS++G L + + D
Sbjct: 352 VAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRT 411
Query: 422 VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKT 481
V LWD+ + + D T +V F G ++A S D +V ++ W T
Sbjct: 412 VCLWDVEAGEQKLILHTDDGVT---TVMFSPDGQFIAAGSLD-KVIRI------WTSSGT 461
Query: 482 FPD-LSGTGKAT-CVKFGPDAKYIAVGSMDRNLRVFGLP--GNDAPS 524
+ L G ++ V F PD KY+ GS+D ++++ L N APS
Sbjct: 462 LVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPS 508
Score = 197 (74.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 61/216 (28%), Positives = 95/216 (43%)
Query: 226 IVSLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKK-VTSVKFVTEGDLFLT 282
I SLD +SKD + +G D L+D +G+ L H+ VT+V F +G
Sbjct: 391 IYSLD--FSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL--HTDDGVTTVMFSPDGQFIAA 446
Query: 283 GSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS-- 340
GS DK +R+W S G L H V +V KY V+ SLDNT ++L
Sbjct: 447 GSLDKVIRIWTSS--GTL--VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCV 502
Query: 341 SGICLTQVSDAGT-----DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKF 395
S + + + G G + S PDG + +G+ + ++ W S +
Sbjct: 503 SNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTL 562
Query: 396 DGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKL 430
GH +V +++ S NG+ AT + D ++W L
Sbjct: 563 QGHNNSVISVAVSPNGHCFATGSGDLRARIWSYEDL 598
Score = 178 (67.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 62/236 (26%), Positives = 114/236 (48%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+ +S D +ATG D ++D ++ L+GH +++ S+ F +G ++GS D+T
Sbjct: 352 VAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRT 411
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTA-SLDNTWCFYDLSSGICLTQ 347
V +W E G K L HT + + + + F+ A SLD + SSG + Q
Sbjct: 412 VCLWD-VEAGEQ--KLIL--HTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQ 465
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
+ G E S AF PDG L +G+ + +K+W+++ +NVA G + +F
Sbjct: 466 LH-----GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTF 520
Query: 408 SENGYYL--ATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFD-HSGSYLAVA 460
+ + ++ T + DG W + K+ R+ + ++P + + H+ S ++VA
Sbjct: 521 TGHKDFILSVTVSPDGK--WIISGSKD-RTIQFWSPDSPHSQLTLQGHNNSVISVA 573
Score = 137 (53.3 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 75/286 (26%), Positives = 115/286 (40%)
Query: 254 SGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS--ADKTVRVWQGSEDGNYDCKHTLKDHTA 311
S Q++ TL H+ + V+F +G TG A V G + + ++
Sbjct: 289 SVQLLHTLE-HTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDL 347
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
V++V KY T D +D++ +V T E Y S F DG
Sbjct: 348 YVRSVAFSPDGKYLATGVEDQQIRIWDIAQ----KRVYRLLTGHEQEIY-SLDFSKDGKT 402
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVG-AVTAISFSENGYYLATAAHDGV-KLWDLRK 429
L +G+ + V +WDV +A K H VT + FS +G ++A + D V ++W
Sbjct: 403 LVSGSGDRTVCLWDV--EAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSG 460
Query: 430 --LKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASV--------KADWN 477
++ E S SV F G YL S D I+++++ V K
Sbjct: 461 TLVEQLHGHEES-----VYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGI 515
Query: 478 CIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAP 523
C +TF V PD K+I GS DR ++ F P D+P
Sbjct: 516 CKQTFTGHKDF--ILSVTVSPDGKWIISGSKDRTIQ-FWSP--DSP 556
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 228 (85.3 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 76/293 (25%), Positives = 128/293 (43%)
Query: 220 KTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDL 279
K K I D + + +ATG D + ++++ GH+ +T V F G L
Sbjct: 15 KGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSL 74
Query: 280 FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDL 339
+ S D+TVR+W S G K HTA V++V + VTAS D + + +
Sbjct: 75 VASSSRDQTVRLWTPSIKGE---STVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGV 131
Query: 340 SSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGH 398
L ++ R + A F PDG ++ + + V++WD S + F +
Sbjct: 132 ERKKFLYSLN------RHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDY 185
Query: 399 VGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457
G+ T + F+ +G +A++ D +K+WD+R K + ++ ++ N F SG+YL
Sbjct: 186 GGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGV--NCFSFHPSGNYL 243
Query: 458 AVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMD 509
S+D + ++ + + I T L G G V F D A G D
Sbjct: 244 ISGSSDSTI-KILDL-LEGRLIYT---LHGHKGPVLTVTFSRDGDLFASGGAD 291
Score = 175 (66.7 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 53/221 (23%), Positives = 101/221 (45%)
Query: 231 IHYSKDV--IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+S+D + T D + ++ + + +L+ H+ V +F +G L + D+T
Sbjct: 108 VHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRT 167
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT-- 346
VR+W S ++ C + D+ V +++ ++ DNT +D+ + +
Sbjct: 168 VRLWDTS---SHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHY 224
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
+V +AG + +FHP G L +G+S++ +KI D+ + GH G V ++
Sbjct: 225 KVHNAGVN-------CFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVT 277
Query: 407 FSENGYYLATAAHDG-VKLWDLR-KLKNFRSFESSDSETPT 445
FS +G A+ D V +W N+R S S+ T
Sbjct: 278 FSRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKRVT 318
Score = 163 (62.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 63/259 (24%), Positives = 104/259 (40%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH ++ F TGS DK++ +W + HT + V +
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKAR---AFRFVGHTDVITGVNFAPSG 72
Query: 323 KYFVTASLDNTWCFYDLS-SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALV 381
++S D T + S G + V A T S F DG L T + + V
Sbjct: 73 SLVASSSRDQTVRLWTPSIKGE--STVFKAHT----ASVRSVHFSRDGQRLVTASDDKSV 126
Query: 382 KIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSD 440
K+W V+ + + + H V FS +G +A+ D V+LWD + F +D
Sbjct: 127 KVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIF--TD 184
Query: 441 SETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGP 498
VDF+ SG+ +A + AD I+++ + + K I+ + + G C F P
Sbjct: 185 YGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKL----IQHYK-VHNAG-VNCFSFHP 238
Query: 499 DAKYIAVGSMDRNLRVFGL 517
Y+ GS D +++ L
Sbjct: 239 SGNYLISGSSDSTIKILDL 257
Score = 138 (53.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 209 RYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKV 268
R +L H +K G+ H S + + +G D+ + D G+++ TL GH V
Sbjct: 216 RTNKLIQH--YKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPV 273
Query: 269 TSVKFVTEGDLFLTGSADKTVRVWQGSEDG-NYDCKHTLKDHTAEV 313
+V F +GDLF +G AD V +W+ + D NY + L H+ V
Sbjct: 274 LTVTFSRDGDLFASGGADSQVLMWKTNFDSLNY--RELLSKHSKRV 317
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 205 (77.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 53/190 (27%), Positives = 86/190 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I T DT L+D +GQ TT +GH+ V S+ + LF++G+ D + ++W E
Sbjct: 57 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 115
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G C+ T H +++ A+ F T S D T +DL + L S D
Sbjct: 116 GM--CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH---DNII 170
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G TS +F G +L G + +WD GH V+ + +++G +AT
Sbjct: 171 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 230
Query: 418 AHDG-VKLWD 426
+ D +K+W+
Sbjct: 231 SWDSFLKIWN 240
Score = 180 (68.4 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 61/245 (24%), Positives = 98/245 (40%)
Query: 273 FVTEGDLFLTGSADKTVRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD 331
+ G+ G D ++ + +GN L HT + N+ VT+S D
Sbjct: 5 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD 63
Query: 332 NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
T +D+ +G Q + T G S + PD + +G +A K+WDV+
Sbjct: 64 TTCALWDIETG----QQTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC 118
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDF 450
F GH + AI F NG AT + D +L+DLR + ++ + SV F
Sbjct: 119 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 178
Query: 451 DHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDR 510
SG L D ++KAD + D + +C+ D +A GS D
Sbjct: 179 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDS 234
Query: 511 NLRVF 515
L+++
Sbjct: 235 FLKIW 239
>UNIPROTKB|F5H2I0 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA]
EMBL:AP003721 InterPro:IPR013915 Pfam:PF08606 EMBL:AP000777
HGNC:HGNC:17896 IPI:IPI01009194 Ensembl:ENST00000546152
ArrayExpress:F5H2I0 Bgee:F5H2I0 Uniprot:F5H2I0
Length = 104
Score = 205 (77.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 56/111 (50%), Positives = 63/111 (56%)
Query: 84 MLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTA 143
ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q A
Sbjct: 1 MLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQA 60
Query: 144 VTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKK 194
V S+ G A E DLG G+TP II +L D L+ +RKK
Sbjct: 61 VPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQDKATVLTTERKK 104
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 215 (80.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 78/262 (29%), Positives = 123/262 (46%)
Query: 264 HSKKVTSV---KFVTEG-DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
H + SV K +G +L ++GS D V+VW+ S++ + + TL+ H V +V V
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDE-RLELQSTLEGHQLGVVSVDVS 73
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
+ ++SLD +DL SG + + DAG P S AF PD L TG+
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRAI-DAG----PVDAWSVAFSPDSQHLATGSHVG 128
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFES 438
V I+ V++ D + +I++S +G YLA+ A DG+ ++D+ K + E
Sbjct: 129 KVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
Query: 439 SDSETPTNSVDFDHSGSYLAVASAD--IRVYQV--ASVKADWNCIKTFPDLSGTGKATC- 493
P S+ F L AS D I++Y+V AS+ A LSG G
Sbjct: 189 H--AMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAAT---------LSGHGSWVLN 237
Query: 494 VKFGPDAKYIAVGSMDRNLRVF 515
V F PD + S D++++V+
Sbjct: 238 VAFSPDDTHFVSSSSDKSVKVW 259
Score = 196 (74.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 62/266 (23%), Positives = 123/266 (46%)
Query: 205 DALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGH 264
+ LE + L H L G+VS+D+ S +++A+ +D + L+D SG+ + +
Sbjct: 52 ERLELQSTLEGHQL------GVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAG 105
Query: 265 SKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKY 324
SV F + TGS V ++ G E G + ++L + ++ KY
Sbjct: 106 PVDAWSVAFSPDSQHLATGSHVGKVNIF-GVETGKKE--YSLDTRGKFILSIAYSPDGKY 162
Query: 325 FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
+ ++D +D+++G L + +G S F PD +L T + + +KI+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTL-----EGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Query: 385 DVKSQANVAKFDGHVGAVTAISFS-ENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSET 443
+V+ + A GH V ++FS ++ +++++++ VK+WD+ +F D +
Sbjct: 218 EVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTF--LDHQD 275
Query: 444 PTNSVDFDHSGSYLAVASAD--IRVY 467
V ++ +GS + + D I VY
Sbjct: 276 QVWGVKYNKNGSKIVSVADDQEIHVY 301
Score = 167 (63.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 59/264 (22%), Positives = 115/264 (43%)
Query: 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQA 315
++ +TL GH V SV G++ + S D +R+W E G + + +
Sbjct: 55 ELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWD-LESGKQI--RAIDAGPVDAWS 111
Query: 316 VTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
V +++ T S + + +G + D R + S A+ PDG L +G
Sbjct: 112 VAFSPDSQHLATGSHVGKVNIFGVETG-----KKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFR 434
+ ++ I+D+ + + +GH + +++FS + L TA+ DG +K+++++ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHA-SLA 225
Query: 435 SFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCV 494
+ S N V F ++ +S+D V +V V A C+ TF L + V
Sbjct: 226 ATLSGHGSWVLN-VAFSPDDTHFVSSSSDKSV-KVWDVSAR-TCVHTF--LDHQDQVWGV 280
Query: 495 KFGPDAKYIAVGSMDRNLRVFGLP 518
K+ + I + D+ + V+ P
Sbjct: 281 KYNKNGSKIVSVADDQEIHVYDCP 304
Score = 124 (48.7 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 35/123 (28%), Positives = 53/123 (43%)
Query: 216 HPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT 275
H L + P I SL ++ T D +++ + TLSGH V +V F
Sbjct: 184 HTLEGHAMP-IRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSP 242
Query: 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWC 335
+ F++ S+DK+V+VW S C HT DH +V V + V+ + D
Sbjct: 243 DDTHFVSSSSDKSVKVWDVSAR---TCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIH 299
Query: 336 FYD 338
YD
Sbjct: 300 VYD 302
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 217 (81.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 72/273 (26%), Positives = 128/273 (46%)
Query: 251 DRPSGQIVT---TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK 307
D SG+I T +L+GHS+ + V ++G L+GS D +VR+W S + +
Sbjct: 55 DDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLG---ETIRSFI 111
Query: 308 DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP 367
HT++V +V+ N+ V+AS D T ++ + C ++D + T F P
Sbjct: 112 GHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ-CKYTITD---QQHTDWITCVRFSP 167
Query: 368 D---GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-K 423
+I+ G + LVK+W++K+ +GH G + ++ S +G A+ DGV K
Sbjct: 168 SPNQAIIVSCGWDK-LVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAK 226
Query: 424 LWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQVASVKADWNCIKTF 482
LWD+++ K+ S E+ + NS+ F +L A+ IR++ + S
Sbjct: 227 LWDVKEGKHLYSLETGST---INSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVK 283
Query: 483 PDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
G T + + + + + GS D N+ V+
Sbjct: 284 QSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVY 316
Score = 175 (66.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 59/254 (23%), Positives = 109/254 (42%)
Query: 230 DIHYSKDVI--ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D + +G D + L+D G+ + + GH+ V SV F + ++ S DK
Sbjct: 77 DVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDK 136
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
T+++W CK+T+ D HT + V + + S C +D + +
Sbjct: 137 TIKLWNTLAQ----CKYTITDQQHTDWITCVRFSPSPNQAIIVS-----CGWDKL--VKV 185
Query: 346 TQVSDAGTDGRPEGYT----SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
+ + + EG+T + PDG + +G + + K+WDVK ++ +
Sbjct: 186 WNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG-ST 244
Query: 402 VTAISFSENGYYLATAAHDGVKLWDLRK---LKNFRSFESSDSETP-TNSVDFDHSGSYL 457
+ ++ FS Y+L A +++W+L + + S P S+ + +G L
Sbjct: 245 INSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLL 304
Query: 458 AVASAD--IRVYQV 469
S D I VY+V
Sbjct: 305 YCGSTDGNIYVYEV 318
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 63/265 (23%), Positives = 112/265 (42%)
Query: 263 GHSKKVTSVKFVTEGDL--FLTGSADKTVRVWQ-GSEDGNYD---CKHTLKDHTAEVQAV 316
GHS VTSV T+ L ++ S DK + VW ++D + + K +L H+ + V
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
++ + + ++ S D++ +DLS G + G S +F PD + + +
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFI-----GHTSDVFSVSFSPDNRQIVSAS 133
Query: 377 SEALVKIWDVKSQANVAKFDG-HVGAVTAISFSE--NGYYLATAAHDG-VKLWDLRKLKN 432
+ +K+W+ +Q D H +T + FS N + + D VK+W+L+
Sbjct: 134 RDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDL 193
Query: 433 FRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKAT 492
++ E N+V GS A D V ++ VK + + T +
Sbjct: 194 NKNLEGHTGVL--NTVTISPDGSLCASGGKD-GVAKLWDVKEGKHLYSL--ETGSTINSL 248
Query: 493 CVKFGPDAKYIAVGSMDRNLRVFGL 517
C F P Y + DR +R++ L
Sbjct: 249 C--FSP-CDYWLCAATDRFIRIWNL 270
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 217 (81.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 72/273 (26%), Positives = 128/273 (46%)
Query: 251 DRPSGQIVT---TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLK 307
D SG+I T +L+GHS+ + V ++G L+GS D +VR+W S + +
Sbjct: 55 DDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLG---ETIRSFI 111
Query: 308 DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP 367
HT++V +V+ N+ V+AS D T ++ + C ++D + T F P
Sbjct: 112 GHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ-CKYTITD---QQHTDWITCVRFSP 167
Query: 368 D---GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-K 423
+I+ G + LVK+W++K+ +GH G + ++ S +G A+ DGV K
Sbjct: 168 SPNQAIIVSCGWDK-LVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAK 226
Query: 424 LWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQVASVKADWNCIKTF 482
LWD+++ K+ S E+ + NS+ F +L A+ IR++ + S
Sbjct: 227 LWDVKEGKHLYSLETGST---INSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVK 283
Query: 483 PDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
G T + + + + + GS D N+ V+
Sbjct: 284 QSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVY 316
Score = 175 (66.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 59/254 (23%), Positives = 109/254 (42%)
Query: 230 DIHYSKDVI--ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D + +G D + L+D G+ + + GH+ V SV F + ++ S DK
Sbjct: 77 DVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDK 136
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
T+++W CK+T+ D HT + V + + S C +D + +
Sbjct: 137 TIKLWNTLAQ----CKYTITDQQHTDWITCVRFSPSPNQAIIVS-----CGWDKL--VKV 185
Query: 346 TQVSDAGTDGRPEGYT----SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
+ + + EG+T + PDG + +G + + K+WDVK ++ +
Sbjct: 186 WNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG-ST 244
Query: 402 VTAISFSENGYYLATAAHDGVKLWDLRK---LKNFRSFESSDSETP-TNSVDFDHSGSYL 457
+ ++ FS Y+L A +++W+L + + S P S+ + +G L
Sbjct: 245 INSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLL 304
Query: 458 AVASAD--IRVYQV 469
S D I VY+V
Sbjct: 305 YCGSTDGNIYVYEV 318
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 63/265 (23%), Positives = 112/265 (42%)
Query: 263 GHSKKVTSVKFVTEGDL--FLTGSADKTVRVWQ-GSEDGNYD---CKHTLKDHTAEVQAV 316
GHS VTSV T+ L ++ S DK + VW ++D + + K +L H+ + V
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
++ + + ++ S D++ +DLS G + G S +F PD + + +
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFI-----GHTSDVFSVSFSPDNRQIVSAS 133
Query: 377 SEALVKIWDVKSQANVAKFDG-HVGAVTAISFSE--NGYYLATAAHDG-VKLWDLRKLKN 432
+ +K+W+ +Q D H +T + FS N + + D VK+W+L+
Sbjct: 134 RDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDL 193
Query: 433 FRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKAT 492
++ E N+V GS A D V ++ VK + + T +
Sbjct: 194 NKNLEGHTGVL--NTVTISPDGSLCASGGKD-GVAKLWDVKEGKHLYSL--ETGSTINSL 248
Query: 493 CVKFGPDAKYIAVGSMDRNLRVFGL 517
C F P Y + DR +R++ L
Sbjct: 249 C--FSP-CDYWLCAATDRFIRIWNL 270
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 217 (81.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 79/318 (24%), Positives = 151/318 (47%)
Query: 211 TQLASHPLHKTSKPGIVSLDIHYSKD-VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVT 269
TQ+A++ + K ++S S+D I VD+ A + + P G+ V +L+GH+ V+
Sbjct: 20 TQIATYT--RNDKTTVLSS----SRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVS 73
Query: 270 SVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS 329
V ++G L+GS DKT+R+W ++ + + HT +V +V A N+ V+ S
Sbjct: 74 DVVISSDGQFALSGSWDKTLRLWDLNQ--GVSTRQFIS-HTKDVLSVAFSADNRQIVSGS 130
Query: 330 LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP---DGLILGTGTSEALVKIWDV 386
D + ++ + T D TD ++ F P D +I+ G + +VK+W++
Sbjct: 131 RDKSIKLWNTLAQCKYTITDDCHTDW----VSTVRFSPSNRDPVIVSAGWDK-VVKVWNL 185
Query: 387 KSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPT 445
+ GH G V ++ S +G A+ DG LWDL + K+ + +D
Sbjct: 186 GNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDV---I 242
Query: 446 NSVDFDHSGSYLAVA-SADIRVYQVASVKADWNCIKTFPDLSGTGKAT-----CVK--FG 497
N++ F + +L A + I+++ + K + +K P+++ +G + C+ +
Sbjct: 243 NAMSFSPNRYWLCAAVGSSIKIWDLED-KKEIEELK--PEIASSGSSRGSSPQCISLAWS 299
Query: 498 PDAKYIAVGSMDRNLRVF 515
D + + G D +RV+
Sbjct: 300 QDGQTLFAGYTDNIIRVY 317
Score = 142 (55.0 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 67/267 (25%), Positives = 107/267 (40%)
Query: 256 QIVTTLSGHSKKVTSVKFVTEGD--LFLTGSADKTVRVWQGSEDGNYD------CKHTLK 307
++ TL GH+ VT + T D L+ S DKT+ VW D +L
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 308 DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP 367
H V V + + ++ ++ S D T +DL+ G+ Q D S AF
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKD-----VLSVAFSA 121
Query: 368 DGLILGTGTSEALVKIWDVKSQANVAKFDG-HVGAVTAISFSENGY--YLATAAHDGV-K 423
D + +G+ + +K+W+ +Q D H V+ + FS + + +A D V K
Sbjct: 122 DNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVK 181
Query: 424 LWDLRKLKNFRSFESSDSETP-TNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTF 482
+W+L N R + T N+V GS A D + ++ D N K
Sbjct: 182 VWNLG---NCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQ-----AMLWDLNEGKHL 233
Query: 483 PDLSGTGKATCVKFGPDAKYI--AVGS 507
L G + F P+ ++ AVGS
Sbjct: 234 YTLPGNDVINAMSFSPNRYWLCAAVGS 260
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 61/239 (25%), Positives = 99/239 (41%)
Query: 305 TLKDHTAEVQAVTVHATN-KYFV-TASLDNTWCFYDLSSGICLTQVSDAGTDGRP----E 358
TL+ HT V + + N K V ++S D T +D+ S + V D G GRP
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDS---VAPV-DEGPIGRPVRSLT 66
Query: 359 GY----TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G+ + DG +G+ + +++WD+ + +F H V +++FS + +
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQI 126
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETP-TNSVDFDHSGSYLAVASADIRVYQVASV 472
+ + D +KLW+ L + + D T ++V F S + SA +V V
Sbjct: 127 VSGSRDKSIKLWNT--LAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWD--KVVKV 182
Query: 473 KADWNC-IKTFPDLSGTGKATCVKFGPDAKYIAVGSMD---------RNLRVFGLPGND 521
NC +KT + TG V PD A G D ++ LPGND
Sbjct: 183 WNLGNCRLKT-NHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND 240
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 217 (81.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 79/318 (24%), Positives = 151/318 (47%)
Query: 211 TQLASHPLHKTSKPGIVSLDIHYSKD-VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVT 269
TQ+A++ + K ++S S+D I VD+ A + + P G+ V +L+GH+ V+
Sbjct: 20 TQIATYT--RNDKTTVLSS----SRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVS 73
Query: 270 SVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS 329
V ++G L+GS DKT+R+W ++ + + HT +V +V A N+ V+ S
Sbjct: 74 DVVISSDGQFALSGSWDKTLRLWDLNQ--GVSTRQFIS-HTKDVLSVAFSADNRQIVSGS 130
Query: 330 LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP---DGLILGTGTSEALVKIWDV 386
D + ++ + T D TD ++ F P D +I+ G + +VK+W++
Sbjct: 131 RDKSIKLWNTLAQCKYTITDDCHTDW----VSTVRFSPSNRDPVIVSAGWDK-VVKVWNL 185
Query: 387 KSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPT 445
+ GH G V ++ S +G A+ DG LWDL + K+ + +D
Sbjct: 186 GNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDV---I 242
Query: 446 NSVDFDHSGSYLAVA-SADIRVYQVASVKADWNCIKTFPDLSGTGKAT-----CVK--FG 497
N++ F + +L A + I+++ + K + +K P+++ +G + C+ +
Sbjct: 243 NAMSFSPNRYWLCAAVGSSIKIWDLED-KKEIEELK--PEIASSGSSRGSSPQCISLAWS 299
Query: 498 PDAKYIAVGSMDRNLRVF 515
D + + G D +RV+
Sbjct: 300 QDGQTLFAGYTDNIIRVY 317
Score = 142 (55.0 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 67/267 (25%), Positives = 107/267 (40%)
Query: 256 QIVTTLSGHSKKVTSVKFVTEGD--LFLTGSADKTVRVWQGSEDGNYD------CKHTLK 307
++ TL GH+ VT + T D L+ S DKT+ VW D +L
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 308 DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP 367
H V V + + ++ ++ S D T +DL+ G+ Q D S AF
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKD-----VLSVAFSA 121
Query: 368 DGLILGTGTSEALVKIWDVKSQANVAKFDG-HVGAVTAISFSENGY--YLATAAHDGV-K 423
D + +G+ + +K+W+ +Q D H V+ + FS + + +A D V K
Sbjct: 122 DNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVK 181
Query: 424 LWDLRKLKNFRSFESSDSETP-TNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTF 482
+W+L N R + T N+V GS A D + ++ D N K
Sbjct: 182 VWNLG---NCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQ-----AMLWDLNEGKHL 233
Query: 483 PDLSGTGKATCVKFGPDAKYI--AVGS 507
L G + F P+ ++ AVGS
Sbjct: 234 YTLPGNDVINAMSFSPNRYWLCAAVGS 260
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 61/239 (25%), Positives = 99/239 (41%)
Query: 305 TLKDHTAEVQAVTVHATN-KYFV-TASLDNTWCFYDLSSGICLTQVSDAGTDGRP----E 358
TL+ HT V + + N K V ++S D T +D+ S + V D G GRP
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDS---VAPV-DEGPIGRPVRSLT 66
Query: 359 GY----TSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G+ + DG +G+ + +++WD+ + +F H V +++FS + +
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQI 126
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETP-TNSVDFDHSGSYLAVASADIRVYQVASV 472
+ + D +KLW+ L + + D T ++V F S + SA +V V
Sbjct: 127 VSGSRDKSIKLWNT--LAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWD--KVVKV 182
Query: 473 KADWNC-IKTFPDLSGTGKATCVKFGPDAKYIAVGSMD---------RNLRVFGLPGND 521
NC +KT + TG V PD A G D ++ LPGND
Sbjct: 183 WNLGNCRLKT-NHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND 240
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 228 (85.3 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 57/204 (27%), Positives = 97/204 (47%)
Query: 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
GI S+ S+ ++A G L+D +IV TL+GH SV F G+ F +GS
Sbjct: 61 GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
D +++W + G C HT K HT V + ++ V+ DN +DL++G
Sbjct: 121 LDTNLKIWDIRKKG---CIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL 177
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTA 404
LT+ +G+ + S FHP +L TG+++ VK WD+++ + V
Sbjct: 178 LTEFKSH--EGQIQ---SLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRC 232
Query: 405 ISFSENGYYLATAAHDGVKL--WD 426
+SF+ +G + + +K+ W+
Sbjct: 233 LSFNPDGKTVLCGLQESLKIFSWE 256
Score = 215 (80.7 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 61/223 (27%), Positives = 96/223 (43%)
Query: 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293
S V+ TGG D L+ + +L GHS + SV F L G+A T+++W
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD 87
Query: 294 GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGT 353
E TL H + +V H ++F + SLD +D+ C+
Sbjct: 88 LEEA---KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK---- 140
Query: 354 DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYY 413
G G F PDG + +G + +VK+WD+ + + +F H G + ++ F + +
Sbjct: 141 -GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 414 LATAAHDG-VKLWDLRKLKNFRSFESSDSETP-TNSVDFDHSG 454
LAT + D VK WDL + F S ET + F+ G
Sbjct: 200 LATGSADRTVKFWDL---ETFELIGSGGPETAGVRCLSFNPDG 239
Score = 214 (80.4 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 66/258 (25%), Positives = 114/258 (44%)
Query: 264 HSKKVTSVKFVTEGD-LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
HS V +K + + +TG D V +W G + +L H++ + +VT A+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWA---IGKPNAILSLYGHSSGIDSVTFDASE 71
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ T +DL + ++ G S FHP G +G+ + +K
Sbjct: 72 VLVAAGAASGTIKLWDLEEAKIVRTLT-----GHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
IWD++ + + + GH V + F+ +G ++ + D VK+WDL K F+S +
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG 186
Query: 442 ETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKAT----CVKFG 497
+ S+DF LA SAD +VK W+ ++TF + G T C+ F
Sbjct: 187 QI--QSLDFHPHEFLLATGSAD------RTVKF-WD-LETFELIGSGGPETAGVRCLSFN 236
Query: 498 PDAKYIAVGSMDRNLRVF 515
PD K + G + +L++F
Sbjct: 237 PDGKTVLCG-LQESLKIF 253
Score = 141 (54.7 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 38/148 (25%), Positives = 67/148 (45%)
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRK 429
+L TG + V +W + + GH + +++F + +A A G +KLWDL +
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 430 LKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTG 489
K R+ S SVDF G + A S D + ++ ++ CI T+ T
Sbjct: 91 AKIVRTLTGHRSNCI--SVDFHPFGEFFASGSLDTNL-KIWDIRKK-GCIHTYK--GHTR 144
Query: 490 KATCVKFGPDAKYIAVGSMDRNLRVFGL 517
++F PD +++ G D ++V+ L
Sbjct: 145 GVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Score = 130 (50.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 37/164 (22%), Positives = 71/164 (43%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G G S F +++ G + +K+WD++ V GH ++ F G +
Sbjct: 57 GHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +K+WD+RK +++ N + F G ++ V+ + + +V +
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGV--NVLRFTPDGRWV-VSGGEDNIVKVWDLT 173
Query: 474 ADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
A + F S G+ + F P +A GS DR ++ + L
Sbjct: 174 AG-KLLTEFK--SHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 202 (76.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 80/340 (23%), Positives = 149/340 (43%)
Query: 119 KKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAII 178
K+ RD R LL Q E++ A S +DED ++ ++ P ++
Sbjct: 93 KERRDRLRELLMQ-EKERQQASGQVEGSQDVEMEDVDEEDDED-EEQEEEFYSRGGPDLL 150
Query: 179 ---AELTDCNAALSQQRKKRQVPPALAP----IDALERYTQ-LASHPLHKTSKPGI--VS 228
E+ + ++QR Q A P + A ++ + L L + G +S
Sbjct: 151 NARVEIAKYSLPRAKQRVAFQKTEAKIPQRTHMRARKQVKERLQGFELQGSQTAGQRHIS 210
Query: 229 LD-IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF-----VTEGDL--- 279
+ I + + +ATG LF P+ L GH+ KV+ + + + E ++
Sbjct: 211 ITRISPNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAE 270
Query: 280 ---FLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCF 336
TG A+ V +W S+D TL HT V V H + ++ +AS D +W
Sbjct: 271 SVNLATGGAEGQVNLWSLSQDTPLA---TLSGHTQRVCRVDFHPSGRFLASASEDTSWRL 327
Query: 337 YDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANV---- 392
+D+ L +G G + +F+ DG +L + +++ +IWD+++ +
Sbjct: 328 WDVEKRTELLL-----QEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILD 382
Query: 393 AKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK 431
DGH+ + A+ + +G+ + +A+ DG +K WD+RK++
Sbjct: 383 GHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQ 422
Score = 147 (56.8 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 44/168 (26%), Positives = 75/168 (44%)
Query: 311 AEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370
A +Q V A + T + + LS L +S G + FHP G
Sbjct: 260 ATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLS-----GHTQRVCRVDFHPSGR 314
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRK 429
L + + + ++WDV+ + + +GH V A+SF+ +G LA+A D + ++WDLR
Sbjct: 315 FLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRT 374
Query: 430 LKNFRSFESS-DSET-PTNSVDFDHSGSYLAVASAD--IRVYQVASVK 473
+ + D P ++D+ G + ASAD I+ + V V+
Sbjct: 375 GRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQ 422
Score = 138 (53.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 224 PGIVSLDIHYSKDVI--ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
PG + + S + + ATGG + L+ + TLSGH+++V V F G
Sbjct: 258 PGATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLA 317
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKD-HTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
+ S D + R+W D + L++ H+ V AV+ + +A D+ +DL
Sbjct: 318 SASEDTSWRLW----DVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLR 373
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+G + + D DG + + + DG + + +++ +K WDV+ H
Sbjct: 374 TGRTI-MILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTS 432
Query: 401 AVT 403
AV+
Sbjct: 433 AVS 435
Score = 68 (29.0 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 453 SGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRN 511
SG++L + D +V + S DW +++ LSG TG V D ++I G DR
Sbjct: 465 SGTFLVSSGFDHKV-NIYSAD-DWALVQS---LSGHTGPVASVDVSRDGRWIVSGGHDRT 519
Query: 512 LRVFG 516
++++G
Sbjct: 520 VKLWG 524
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 178 (67.7 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 47/170 (27%), Positives = 79/170 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L+GH + SVKF L ++ S D T++VW E G ++ TLK HT VQ +
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWD-FESGEFE--RTLKGHTNAVQDIDFDK 158
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
T + S D T +D + C+ + G + F P G L + + +
Sbjct: 159 TGNLLASCSADLTIKLWDFQTYDCVKTLH-----GHDHNVSCVRFTPSGDQLISSSRDKT 213
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRK 429
+K+W+ + + GH V I+ SE+G +A+ ++D +K W++ K
Sbjct: 214 IKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVK 263
Score = 175 (66.7 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 44/183 (24%), Positives = 81/183 (44%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
I S+ H S ++ + D ++D SG+ TL GH+ V + F G+L + SA
Sbjct: 109 INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSA 168
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D T+++W YDC TL H V V + +++S D T ++ ++G C+
Sbjct: 169 DLTIKLWDFQ---TYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCI 225
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
+ G + DG + + +++ +K W++ +A + H V +
Sbjct: 226 KTLV-----GHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECL 280
Query: 406 SFS 408
+FS
Sbjct: 281 AFS 283
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 44/159 (27%), Positives = 71/159 (44%)
Query: 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD- 420
S FHP ++ + + +A +K+WD +S GH AV I F + G LA+ + D
Sbjct: 111 SVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADL 170
Query: 421 GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNC 478
+KLWD + ++ D + V F SG L +S D I+V++ A+ C
Sbjct: 171 TIKLWDFQTYDCVKTLHGHDHNV--SCVRFTPSGDQLISSSRDKTIKVWEAAT----GYC 224
Query: 479 IKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
IKT + V D IA S D+ ++ + +
Sbjct: 225 IKTLVGHEDWVRKITVS--EDGSCIASCSNDQTIKTWNI 261
Score = 120 (47.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 49/208 (23%), Positives = 87/208 (41%)
Query: 303 KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362
KH L H + +V H + V+AS D T +D SG + G
Sbjct: 99 KHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESG-----EFERTLKGHTNAVQD 153
Query: 363 AAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG- 421
F G +L + +++ +K+WD ++ V GH V+ + F+ +G L +++ D
Sbjct: 154 IDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKT 213
Query: 422 VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKT 481
+K+W+ ++ + +V D GS +A S D + VK + C+ T
Sbjct: 214 IKVWEAATGYCIKTLVGHEDWVRKITVSED--GSCIASCSNDQTIKTWNIVKGE--CLAT 269
Query: 482 FPDLSGTGKATCVKFGPDAKYIAV-GSM 508
+ + S C+ F A I + GS+
Sbjct: 270 YREHSHV--VECLAFST-ANIIDIPGSL 294
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 38/146 (26%), Positives = 69/146 (47%)
Query: 245 TNAVLFDRPSGQIVTTLSGHSK--KVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDC 302
+ A + D P G +++T G SK + V + TGS DKT+++W+ + G C
Sbjct: 283 STANIIDIP-GSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELAT-GR--C 338
Query: 303 KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362
T H V+AV H K+ ++ D T +D++ G C+ +++A T + S
Sbjct: 339 LATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTH-----FIS 393
Query: 363 AA-FHPDGLILGTGTSEALVKIWDVK 387
F + TG + ++K+W ++
Sbjct: 394 CLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 102 (41.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 28/122 (22%), Positives = 60/122 (49%)
Query: 357 PEGYTSAAFHPDGLILG------TGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSEN 410
PEG + P G ++G TG+ + +KIW++ + +A + GH V A+ F
Sbjct: 298 PEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPC 357
Query: 411 GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVY 467
G +L + D +++WD+ + + ++ + + + +DF ++A D I+V+
Sbjct: 358 GKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHF-ISCLDFCLHNPHIATGGVDDVIKVW 416
Query: 468 QV 469
++
Sbjct: 417 KL 418
Score = 89 (36.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 31/108 (28%), Positives = 53/108 (49%)
Query: 413 YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
YLAT + D +K+W+L + ++ D+ +V F G +L D IRV+ +
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWV--RAVRFHPCGKFLLSVGDDKTIRVWDI 375
Query: 470 ASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
A + CIKT + + T +C+ F +IA G +D ++V+ L
Sbjct: 376 AQGR----CIKTINE-AHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
Score = 85 (35.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 22/100 (22%), Positives = 44/100 (44%)
Query: 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293
S D + + D +++ +G + TL GH V + +G + S D+T++ W
Sbjct: 201 SGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Query: 294 GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT 333
+ +C T ++H+ V+ + N + SL +T
Sbjct: 261 IVKG---ECLATYREHSHVVECLAFSTANIIDIPGSLLST 297
Score = 41 (19.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 489 GKATCVKFGPDAK------YIAVGSMDRNLRVFGL 517
GK+ VK GP Y+A GS D+ ++++ L
Sbjct: 300 GKSK-VKQGPGGNLVGQCGYLATGSRDKTIKIWEL 333
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 224 (83.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 54/196 (27%), Positives = 91/196 (46%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ATGG D L+ + +L+GH+ V SV+ T +L + GS ++RVW E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD-LE 93
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
TL H A + ++ H ++ + S D +D+ C+ + G
Sbjct: 94 AAKI--LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR-----GH 146
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ F PDG L + + VK+WD+ + +++F GH G V + F N Y LA+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLAS 206
Query: 417 AAHDG-VKLWDLRKLK 431
+ D ++ WDL K +
Sbjct: 207 GSSDRTIRFWDLEKFQ 222
Score = 223 (83.6 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 67/225 (29%), Positives = 107/225 (47%)
Query: 264 HSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
H+ V+S+ G L TG D V +W ++ +C +L HT+ V++V ++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESVRLNTPE 75
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ V S + +DL + L + G S FHP G + +G+ + +K
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLM-----GHKANICSLDFHPYGEFVASGSQDTNIK 130
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WD++ + V ++ GH AV + FS +G +LA+AA D VKLWDL K F
Sbjct: 131 LWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 442 ETPTNSVDFDHSGSYL-AVASAD--IRVYQVASVKADWNCIKTFP 483
P N V+F H YL A S+D IR + + + +CI+ P
Sbjct: 191 --PVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVV-SCIEGEP 231
Score = 174 (66.3 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 42/177 (23%), Positives = 87/177 (49%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ ++ +++I G + ++D + +I+ TL GH + S+ F G+ +GS
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D +++W G C + H+ V+ + K+ +A+ D+T +DL++G +
Sbjct: 126 DTNIKLWDIRRKG---CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV 402
++ G G P FHP+ +L +G+S+ ++ WD++ V+ +G G V
Sbjct: 183 SEFP--GHTG-PVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 40/154 (25%), Positives = 75/154 (48%)
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P+ LI+ G+ +++WD+++ + GH + ++ F G ++A+ + D +KLW
Sbjct: 74 PEELIVA-GSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
D+R+ K F + F G +LA A+ D ++++ + + K + FP
Sbjct: 133 DIRR-KGC-VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM----MSEFP 186
Query: 484 DLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
TG V+F P+ +A GS DR +R + L
Sbjct: 187 --GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
G +L TG + V +W + + GH V ++ + + + G +++WDL
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG 487
K R+ + S+DF G ++A S D + ++ ++ C+ + G
Sbjct: 93 EAAKILRTLMGHKANIC--SLDFHPYGEFVASGSQDTNI-KLWDIRRK-GCVFRY---RG 145
Query: 488 TGKAT-CVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+A C++F PD K++A + D ++++ L SE
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Score = 131 (51.2 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 38/118 (32%), Positives = 54/118 (45%)
Query: 223 KPGIVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
K I SLD H + +A+G DTN L+D R G V GHS+ V ++F +G
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDL 339
+ + D TV++W + G + HT V V H + S D T F+DL
Sbjct: 164 SAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 43 (20.2 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 362 SAAFHPDGLILGTGTSEAL-VKIWD 385
S F+PDG L +G ++L V W+
Sbjct: 292 SVLFNPDGCCLYSGCQDSLRVYGWE 316
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 225 (84.3 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 64/221 (28%), Positives = 97/221 (43%)
Query: 244 DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303
D N + D SG++ +L GH+ V F E +L L+ S D T+R+W + C
Sbjct: 429 DINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLL---TWSCV 485
Query: 304 HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSA 363
T + H V V YFV+ S D T + S L G
Sbjct: 486 VTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFV-----GHLSDVDCV 540
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GV 422
FHP+ + TG+S+ V++WD + +V GH G+V++++FS G YLA+ + D +
Sbjct: 541 QFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNI 600
Query: 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
+WDL + S T + F G+ LA A D
Sbjct: 601 IIWDLSNGSLVTTLLRHTSTVTT--ITFSRDGTVLAAAGLD 639
Score = 141 (54.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 54/233 (23%), Positives = 91/233 (39%)
Query: 284 SADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGI 343
SAD VR+ +D + + +L HT V ++ S D+T + L +
Sbjct: 427 SADINVRML---DDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWS 483
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C+ G F P G + + + ++W S + F GH+ V
Sbjct: 484 CVVTYR-----GHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVD 538
Query: 404 AISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA 462
+ F N Y+AT + D V+LWD ++ R +S+ F G YLA S
Sbjct: 539 CVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSV--SSLAFSACGRYLASGSV 596
Query: 463 DIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
D + + ++ + + T L T T + F D +A +D NL ++
Sbjct: 597 DHNI--IIWDLSNGSLVTTL--LRHTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/110 (30%), Positives = 49/110 (44%)
Query: 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+ H + + +ATG D L+D +GQ V ++GH V+S+ F G +GS D
Sbjct: 540 VQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHN 599
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYD 338
+ +W S N TL HT+ V +T A LDN +D
Sbjct: 600 IIIWDLS---NGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 36/142 (25%), Positives = 60/142 (42%)
Query: 244 DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303
D A L+ S Q + GH V V+F + TGS+D+TVR+W +
Sbjct: 513 DKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSV--- 569
Query: 304 HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSA 363
+ H V ++ A +Y + S+D+ +DLS+G +T + T+
Sbjct: 570 RLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLR-----HTSTVTTI 624
Query: 364 AFHPDGLILGTGTSEALVKIWD 385
F DG +L + + +WD
Sbjct: 625 TFSRDGTVLAAAGLDNNLTLWD 646
Score = 132 (51.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 37/155 (23%), Positives = 75/155 (48%)
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV- 422
AF P+ +L + + ++ +++W + + + V + GHV V + F+ +GYY + ++D
Sbjct: 457 AFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTA 516
Query: 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTF 482
+LW + R F S+ + V F + +Y+A S+D V ++ + T
Sbjct: 517 RLWATDSNQALRVFVGHLSDV--DCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMT- 573
Query: 483 PDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
G + + F +Y+A GS+D N+ ++ L
Sbjct: 574 ---GHKGSVSSLAFSACGRYLASGSVDHNIIIWDL 605
Score = 57 (25.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 253 PSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVW 292
PS T L+ H + VT + + + G D +VR+W
Sbjct: 366 PSAVFYTVLNSH-QGVTCAEISDDSTMLACGFGDSSVRIW 404
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 223 (83.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 79/266 (29%), Positives = 121/266 (45%)
Query: 254 SGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEV 313
+G + L GH V S +F+ + L+ S D ++R W + G++ + H V
Sbjct: 331 TGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW---DLGSFTNTVLYQGHAYPV 387
Query: 314 QAVTVHATNKYFVTASLDNT---WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370
V + + YF + S D T W F D + + + A D FHP+
Sbjct: 388 WDVDISPFSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVD-------CVKFHPNSN 439
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRK 429
L TG+++ V++W + +V F GH G V ++SFS NG YLA+A D +KLWDL
Sbjct: 440 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLAS 499
Query: 430 LKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLS 486
F+ +DS T S+ F +A AS D +RV+ + S C T D S
Sbjct: 500 GTLFKELRGHTDSIT---SLAFSPDSGLIASASMDNSVRVWDIRST-----CCNTPADGS 551
Query: 487 GTGKATCVKFGPDAKYIAVGSMDRNL 512
+G+ V G + ++V M NL
Sbjct: 552 -SGELVGVYTGQMSNVLSVQFMACNL 576
Score = 176 (67.0 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 53/200 (26%), Positives = 85/200 (42%)
Query: 209 RYTQLASHP---LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHS 265
RY L S L++ + +DI A+G D A L+ + +GH
Sbjct: 367 RYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHL 426
Query: 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYF 325
V VKF + TGS DKTVR+W ++ GN H V +++ KY
Sbjct: 427 ADVDCVKFHPNSNYLATGSTDKTVRLWS-AQQGN--SVRLFTGHRGPVLSLSFSPNGKYL 483
Query: 326 VTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWD 385
+A D +DL+SG ++ G + TS AF PD ++ + + + V++WD
Sbjct: 484 ASAGEDQRLKLWDLASGTLFKELR-----GHTDSITSLAFSPDSGLIASASMDNSVRVWD 538
Query: 386 VKSQANVAKFDGHVGAVTAI 405
++S DG G + +
Sbjct: 539 IRSTCCNTPADGSSGELVGV 558
Score = 164 (62.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 59/234 (25%), Positives = 98/234 (41%)
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
T+ + ED L+ H V + A + ++ S D + ++DL S T
Sbjct: 320 TLEEEENEEDNTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS---FTN 376
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
G P L +G+ + ++W + + GH+ V + F
Sbjct: 377 T--VLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF 434
Query: 408 SENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--I 464
N YLAT + D V+LW ++ + R F + P S+ F +G YLA A D +
Sbjct: 435 HPNSNYLATGSTDKTVRLWSAQQGNSVRLF--TGHRGPVLSLSFSPNGKYLASAGEDQRL 492
Query: 465 RVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+++ +AS F +L G T T + F PD+ IA SMD ++RV+ +
Sbjct: 493 KLWDLASGTL-------FKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 200 (75.5 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 53/190 (27%), Positives = 84/190 (44%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I T DT L+D +GQ +GHS V S+ +G F++G+ D ++++W +
Sbjct: 57 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDS 116
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
C+ T H +++ AV F T S D T +DL + L S D
Sbjct: 117 M---CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSH---DNII 170
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G TS AF G +L G + IWD GH V+ + +++G +AT
Sbjct: 171 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 230
Query: 418 AHDG-VKLWD 426
+ D +K+W+
Sbjct: 231 SWDSFLKIWN 240
Score = 188 (71.2 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 60/245 (24%), Positives = 98/245 (40%)
Query: 273 FVTEGDLFLTGSADKTVRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD 331
+ G+ G D ++ + +GN L HT + N+ +T+S D
Sbjct: 5 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGD 63
Query: 332 NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
T +D+ +G V AG G S + PDG +G +A +K+WDV+
Sbjct: 64 TTCALWDIETG--QQTVGFAGHSG---DVMSLSLAPDGRTFVSGACDASIKLWDVRDSMC 118
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDF 450
F GH + A++F NGY T + D +L+DLR + + + SV F
Sbjct: 119 RQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAF 178
Query: 451 DHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDR 510
SG L D ++K D + D + +C+ D +A GS D
Sbjct: 179 SRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDS 234
Query: 511 NLRVF 515
L+++
Sbjct: 235 FLKIW 239
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 213 (80.0 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 77/270 (28%), Positives = 118/270 (43%)
Query: 170 HTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPG---I 226
H G ++ L + N LS R K + I L R Q +P K S G I
Sbjct: 14 HNGWVTSLATSLENPNMLLSGSRDKTLI------IWNLTRDEQAYGYP--KRSLEGHSHI 65
Query: 227 VSLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
VS D S D + D + L++ SGQ T GH+ V SV F + ++GS
Sbjct: 66 VS-DCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGS 124
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLS 340
D+T+++W G DCK+T+ D HT V V + + N V+A D ++L+
Sbjct: 125 RDRTIKLWNTL--G--DCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELA 180
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
S C Q G G + PDG + +G + + +WD+ ++ + H G
Sbjct: 181 S--CRLQTDHIGHTGY---INTVTISPDGSLCASGGKDGVTMLWDLNESKHL--YSLHAG 233
Query: 401 -AVTAISFSENGYYLATAAHDGVKLWDLRK 429
+ A+ FS N Y+L A + ++DL K
Sbjct: 234 DEIHALVFSPNRYWLCAATSSSITIFDLEK 263
Score = 207 (77.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 71/269 (26%), Positives = 126/269 (46%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
+L GHS V+ ++G L+ S DK++R+W+ S T HT +V +V+
Sbjct: 58 SLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSG---QTTRTFVGHTNDVLSVSFS 114
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGT 376
A N+ V+ S D T ++ + G C ++D G E + F P+ +I+ G
Sbjct: 115 ADNRQIVSGSRDRTIKLWN-TLGDCKYTITDKG---HTEWVSCVRFSPNPQNPVIVSAGW 170
Query: 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVK-LWDLRKLKNFRS 435
+ LVK+W++ S GH G + ++ S +G A+ DGV LWDL + K+ S
Sbjct: 171 DK-LVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYS 229
Query: 436 FESSDSETPTNSVDFDHSGSYLAVA-SADIRVYQVASVKADWNCIKTFPDLSGTGKAT-- 492
+ D +++ F + +L A S+ I ++ + K+ + +K P+ GK +
Sbjct: 230 LHAGDE---IHALVFSPNRYWLCAATSSSITIFDLEK-KSKVDELK--PEYIEKGKKSRE 283
Query: 493 --CVK--FGPDAKYIAVGSMDRNLRVFGL 517
CV + D + + G D +R +G+
Sbjct: 284 PECVSLAWSADGQTLFAGYTDNKIRAWGV 312
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 38/159 (23%), Positives = 71/159 (44%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
VI + G D +++ S ++ T GH+ + +V +G L +G D +W +E
Sbjct: 164 VIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNE 223
Query: 297 DGNYDCKHTLKDHTA-EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVS----DA 351
KH H E+ A+ V + N+Y++ A+ ++ +DL + ++ +
Sbjct: 224 S-----KHLYSLHAGDEIHAL-VFSPNRYWLCAATSSSITIFDLEKKSKVDELKPEYIEK 277
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
G R S A+ DG L G ++ ++ W V S+A
Sbjct: 278 GKKSREPECVSLAWSADGQTLFAGYTDNKIRAWGVMSRA 316
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 223 (83.6 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 63/245 (25%), Positives = 113/245 (46%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+ YS D IA+ G D L+ + + H + S+ F +G L+ S DKT
Sbjct: 95 VKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKT 154
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
+++W+ +D + C + H V++ + + + S D T +DL+ +++
Sbjct: 155 LKLWR-LQDKKFMC--SFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKY 211
Query: 349 SDAGTD---GRPEGYTS-------AAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGH 398
S + + Y+ FHPDG L + + + +KI D++S + ++ H
Sbjct: 212 STLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAH 271
Query: 399 VGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457
V +IS GY+LA+A D +K+WDLR+ + + S+D + T V F+ SG Y
Sbjct: 272 DAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITT--VQFNQSGDYF 329
Query: 458 AVASA 462
A +
Sbjct: 330 ATGGS 334
Score = 167 (63.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 58/268 (21%), Positives = 115/268 (42%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH V VK+ +G+ + D+ +R+WQ + C +K H +++++ A
Sbjct: 87 GHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSK--CS-IIKAHCGAIRSMSFSADG 143
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
Y +++S D T + L + + G S PD ++ +G+ + V
Sbjct: 144 GYLLSSSDDKTLKLWRLQDKKFMCSFA-----GHKNWVRSGVISPDMRLVASGSDDKTVM 198
Query: 383 IWDVKSQANVAKFD---------------GHVGAVTAISFSENGYYLATAAHDG-VKLWD 426
+WD+ Q V+K+ H+ V+ + F +G L +++ D +K+ D
Sbjct: 199 LWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITD 258
Query: 427 LRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPD 484
+R K + + + D++ NS+ +G +LA A +D I+++ + + + D
Sbjct: 259 IRSNKLIQHYNAHDAQV--NSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKD 316
Query: 485 LSGTGKATCVKFGPDAKYIAVGSMDRNL 512
+ T V+F Y A G +NL
Sbjct: 317 I------TTVQFNQSGDYFATGG-SQNL 337
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 43/169 (25%), Positives = 79/169 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G + T A F P + + + +++V +W+ K Q KF GH GAV + +S +G +
Sbjct: 45 GHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETI 104
Query: 415 ATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471
A+ D ++LW +++ S + S+ F G YL +S D ++++++
Sbjct: 105 ASCGQDRQIRLWQ-NTVQSKCSIIKAHCGA-IRSMSFSADGGYLLSSSDDKTLKLWRLQD 162
Query: 472 VKADWNCIKTFPDLSGTGKATCVKFG---PDAKYIAVGSMDRNLRVFGL 517
K + C S G V+ G PD + +A GS D+ + ++ L
Sbjct: 163 KK--FMC-------SFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDL 202
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 223 (83.6 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 67/245 (27%), Positives = 105/245 (42%)
Query: 251 DRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHT 310
D+ TL GHS V S F + L+GS DKTVR+W S D + + K H
Sbjct: 511 DKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLW--SMD-THTALVSYKGHN 567
Query: 311 AEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370
V V+ YF TAS D T + L + G +FHP+G
Sbjct: 568 HPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFA-----GHLNDVDCVSFHPNGC 622
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRK 429
+ TG+S+ ++WDV + +V F GH V +I+ +G +L+T + DG+ +WD+
Sbjct: 623 YVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGT 682
Query: 430 LKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSG 487
K + + S+ + G+ L AD +RV+ + + + P +
Sbjct: 683 GKRLKQMRGH-GKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPDEPFIGY 741
Query: 488 TGKAT 492
G T
Sbjct: 742 LGDVT 746
Score = 206 (77.6 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 57/205 (27%), Positives = 92/205 (44%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+ +G D L+ + + + GH+ V V F G F T S D+T R+W S D
Sbjct: 540 LLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLW--SCD 597
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
Y + H +V V+ H Y T S D T +D+S+G + G
Sbjct: 598 HIYPLR-IFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFL-----GHT 651
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGH-VGAVTAISFSENGYYLAT 416
S A PDG L TG+ + ++ +WD+ + + + GH A+ ++S+S+ G L +
Sbjct: 652 APVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLIS 711
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSD 440
D V++WDL+K S E +
Sbjct: 712 GGADHTVRVWDLKKATTEPSAEPDE 736
Score = 164 (62.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 48/177 (27%), Positives = 85/177 (48%)
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C T V +GT Y S +F PD L +G+ + V++W + + + + GH V
Sbjct: 518 CKTLVGHSGTV-----Y-STSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVW 571
Query: 404 AISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA 462
+SFS G+Y ATA+HD +LW + R F ++ + V F +G Y+ S+
Sbjct: 572 DVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDV--DCVSFHPNGCYVFTGSS 629
Query: 463 D--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
D R++ V++ + ++ F L T + PD ++++ GS D + V+ +
Sbjct: 630 DKTCRMWDVST----GDSVRLF--LGHTAPVISIAVCPDGRWLSTGSEDGIINVWDI 680
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 56/207 (27%), Positives = 90/207 (43%)
Query: 206 ALERYTQLASHPLHKTSKPGIVSLDIHYSK--DVIATGGVDTNAVLFDRPSGQIVTTLSG 263
+++ +T L S+ H + P D+ +S AT D A L+ + +G
Sbjct: 553 SMDTHTALVSYKGH--NHP---VWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAG 607
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H V V F G TGS+DKT R+W S D HTA V ++ V +
Sbjct: 608 HLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTG---DSVRLFLGHTAPVISIAVCPDGR 664
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
+ T S D +D+ +G L Q+ G + Y S ++ +G +L +G ++ V++
Sbjct: 665 WLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAI---Y-SLSYSKEGNVLISGGADHTVRV 720
Query: 384 WDVKSQANVAK------FDGHVGAVTA 404
WD+K F G++G VTA
Sbjct: 721 WDLKKATTEPSAEPDEPFIGYLGDVTA 747
Score = 128 (50.1 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 39/130 (30%), Positives = 59/130 (45%)
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
GH G V + SFS + YL + + D V+LW + S++ + P V F G
Sbjct: 523 GHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNH--PVWDVSFSPLGH 580
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFP--DLSG-TGKATCVKFGPDAKYIAVGSMDRNL 512
Y A AS D Q A + W+C +P +G CV F P+ Y+ GS D+
Sbjct: 581 YFATASHD----QTARL---WSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTC 633
Query: 513 RVFGLPGNDA 522
R++ + D+
Sbjct: 634 RMWDVSTGDS 643
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS 329
+ GSE +++ DH E + + ++KY +T S
Sbjct: 211 FHGSEINRLFSVNSI-DHIKENEVASAFQSHKYRITMS 247
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 228 (85.3 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 78/292 (26%), Positives = 128/292 (43%)
Query: 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293
SK ++AT + + +LFD S ++++ + HSK V +G+ +TGS D T +VW
Sbjct: 1710 SKQILATT-MKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWS 1768
Query: 294 GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGT 353
S G + L + T + D T +D+SS +V A
Sbjct: 1769 -STLGT-QLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREV--AKL 1824
Query: 354 DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKS-QANVAKFDGHVGAVTAISFSE-NG 411
G TS F P G ++ + + + L+K+W+V++ +A H + ISF+ N
Sbjct: 1825 HGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNE 1884
Query: 412 YYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVD---FDHSGSYLAVASAD--IR 465
L + + D K+W F + + +E TN++ + G Y+A S D I
Sbjct: 1885 CELISCSDDYSTKVWS-----RFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIA 1939
Query: 466 VYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
VY +S K + +K D C F PD+K + G D NLRV+ +
Sbjct: 1940 VYLCSSKKLLFR-LKGHTDWVNF----CT-FSPDSKKLVSGGWDFNLRVWNI 1985
Score = 201 (75.8 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 76/298 (25%), Positives = 128/298 (42%)
Query: 233 YSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
YS+D +IA+ G D+ +F +G + TL GHS ++ F +G + S D TV
Sbjct: 1530 YSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVI 1589
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHAT-NKYFVTASLDNTWCFYDLSSGICLTQVS 349
VW GN H KDH+ V T N ++ + D++ ++ S
Sbjct: 1590 VWDLIV-GNQI--HQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFR 1646
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWD-----VKSQA-NVAKFDGHVGAVT 403
A + +P S + PDG ++ + + + +KIW+ K + +V G++
Sbjct: 1647 SAHS--KP--VNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIK 1702
Query: 404 AISFSENG-YYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA 462
+ FS N LAT + V L+D+ K S + S++ N + G+Y+ S
Sbjct: 1703 SCKFSANSKQILATTMKNDVLLFDVNSQKLI-SVMGNHSKS-VNHCSLSNDGNYIVTGSD 1760
Query: 463 DIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN 520
D +S + F + G A C+ F P +AVG+ D +R+F + N
Sbjct: 1761 DATAKVWSSTLGTQ--LTNFL-IPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSN 1815
Score = 137 (53.3 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 70/302 (23%), Positives = 125/302 (41%)
Query: 233 YSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFV-TEGDLFLTGSADKTV 289
+S D +A+ D +++D G + HS+ V +F T +L ++ + D ++
Sbjct: 1572 FSDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSI 1631
Query: 290 RVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WCFYDLSSGICLT 346
++ S+ + ++ H+ V + ++S D T W +D + L
Sbjct: 1632 IIFNTSDKNIF--RNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLK 1689
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGL-ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
V DA S F + IL T T + V ++DV SQ ++ H +V
Sbjct: 1690 HVIDASLSYG--SIKSCKFSANSKQILAT-TMKNDVLLFDVNSQKLISVMGNHSKSVNHC 1746
Query: 406 SFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD- 463
S S +G Y+ T + D K+W +F + N + F + LAV + D
Sbjct: 1747 SLSNDGNYIVTGSDDATAKVWSSTLGTQLTNF-LIPGDCWANCLAFSPTQPLLAVGATDC 1805
Query: 464 -IRVYQVASVKADWNCI-KTFPDLSGTGKA-TCVKFGPDAKYIAVGSMDRNLRVFGLPGN 520
+R++ V+S N I + L G +A T + F P IA S D ++V+ + +
Sbjct: 1806 TVRLFDVSS-----NTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTH 1860
Query: 521 DA 522
A
Sbjct: 1861 KA 1862
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 69/301 (22%), Positives = 129/301 (42%)
Query: 210 YTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLS-GHSKKV 268
Y ++A LH ++ I S+ S ++IA+ D +++ + + T+ H+ +
Sbjct: 1818 YREVAK--LHGHTR-AITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPI 1874
Query: 269 TSVKF--VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDH--TAEVQAVTVHATNKY 324
+ F E +L ++ S D + +VW + TL T ++ KY
Sbjct: 1875 NCISFNPTNECEL-ISCSDDYSTKVWS-----RFTTSTTLSTEGSTNTIKHCVYSPDGKY 1928
Query: 325 FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
T S D + Y SS L ++ G + F PD L +G + +++W
Sbjct: 1929 IATVSRDCSIAVYLCSSKKLLFRLK-----GHTDWVNFCTFSPDSKKLVSGGWDFNLRVW 1983
Query: 385 DVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF--ESSDS 441
++K+Q + GH ++ F+++ Y+ +A+ DG VK+WD + S ++ S
Sbjct: 1984 NIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLRHQTRIS 2043
Query: 442 ETPTNSVDFDHSGSYLAVASADI--RVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPD 499
+ ++S D SG + + I Y VA +C+ T SG K V+F P+
Sbjct: 2044 DVVSSS---DASGRIFSSSDDGIIKSWYPVAG-----SCLATLTGHSGPIKQ--VQFNPN 2093
Query: 500 A 500
+
Sbjct: 2094 S 2094
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 211 (79.3 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 86/322 (26%), Positives = 139/322 (43%)
Query: 170 HTGITPAIIAELTDCNAALSQQRKKRQVPPALA-PIDALERYTQ--LASHPLHKTSKPGI 226
H G I D + +S R K + L D Y Q L H H S +
Sbjct: 14 HNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHS-HFISDV-V 71
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D +Y+ +G D L+D +G+ GH+K V SV F + ++GS D
Sbjct: 72 LSSDGNYA----LSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRD 127
Query: 287 KTVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSG 342
KT+++W + CK T+++ HT V V + + +N V+ D T ++L++
Sbjct: 128 KTIKLWNTLAE----CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLAN- 182
Query: 343 ICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV 402
C + + G +G T + PDG + +G ++ +WD+ N+ + H +
Sbjct: 183 -CKLKNNHHGHNGYLNTVTVS---PDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDII 237
Query: 403 TAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVD--------FDHSG 454
A+ FS N Y+L A +K+WDL K + +PT+ D + G
Sbjct: 238 NALCFSPNRYWLCVAYGPSIKIWDLACKKTVEELRP-EVVSPTSKADQPQCLSLAWSTDG 296
Query: 455 SYLAVASAD--IRVYQVASVKA 474
L +D IRV+QV SV A
Sbjct: 297 QTLFAGYSDNTIRVWQV-SVSA 317
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 223 (83.6 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 59/180 (32%), Positives = 94/180 (52%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+A+G D L+D +G + TL GHS V SV F +G L +GS DKTVR+W +
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
G+ + TL+ H+ V++V + + S D T +D ++G L Q G
Sbjct: 769 -GSL--QQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATG-SLQQT----LRGH 820
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
+ S AF PDG +L +G+ + V++WD + + + G VT + FS++G Y++T
Sbjct: 821 SDTVRSVAFSPDGRLLASGSFDKTVRLWD-PATGTLQQTLIIKGTVTELQFSQDGSYIST 879
Score = 180 (68.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 53/173 (30%), Positives = 84/173 (48%)
Query: 255 GQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQ 314
G + TL GHS V +V +GS D+TVR+W + G+ + TL+ H+ V
Sbjct: 693 GAELQTLEGHSNSVWAV--------LASGSDDETVRLWDPAT-GSL--QQTLEGHSGWVL 741
Query: 315 AVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374
+V + + S D T +D ++G L Q G S AF PDG +L +
Sbjct: 742 SVAFSPDGRLLASGSFDKTVRLWDPATG-SLQQT----LRGHSNWVRSVAFSPDGRLLAS 796
Query: 375 GTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWD 426
G+ + V++WD + + GH V +++FS +G LA+ + D V+LWD
Sbjct: 797 GSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
Score = 160 (61.4 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 46/148 (31%), Positives = 71/148 (47%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
L + +S D ++A+G D L+D +G + TL GHS V SV F +G L +GS D
Sbjct: 741 LSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFD 800
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT 346
KTVR+W + G+ + TL+ H+ V++V + + S D T +D ++G
Sbjct: 801 KTVRLWDPAT-GSL--QQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQ 857
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGLILGT 374
+ GT T F DG + T
Sbjct: 858 TLIIKGT------VTELQFSQDGSYIST 879
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 59/226 (26%), Positives = 110/226 (48%)
Query: 300 YDCKH-TLKD-HTAEVQAVTVHATNKYFV--TASLDNTWCFYDLSSGIC-LTQVSDA-GT 353
+D K LK+ A+ + ++ F TA + + + DL S IC L +V++ G
Sbjct: 636 HDAKRFVLKNCQVADEAPLQIYCAGLVFAPQTALIRSNFS-EDLPSWICQLPKVNEKWGA 694
Query: 354 DGRP-EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGY 412
+ + EG++++ + +L +G+ + V++WD + + +GH G V +++FS +G
Sbjct: 695 ELQTLEGHSNSVW----AVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGR 750
Query: 413 YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
LA+ + D V+LWD ++ + SV F G LA S D +R++
Sbjct: 751 LLASGSFDKTVRLWDPATGSLQQTLRGHSNWV--RSVAFSPDGRLLASGSFDKTVRLWDP 808
Query: 470 ASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
A+ +T S T ++ V F PD + +A GS D+ +R++
Sbjct: 809 ATGSLQ----QTLRGHSDTVRS--VAFSPDGRLLASGSFDKTVRLW 848
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 222 (83.2 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 54/204 (26%), Positives = 96/204 (47%)
Query: 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
GI S+ S+ ++A G L+D ++V TL+GH SV F G+ F +GS
Sbjct: 61 GIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGS 120
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
D +++W + G C HT K HT V + ++ V+ DN +DL++G
Sbjct: 121 LDTNLKIWDIRKKG---CIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKL 177
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTA 404
L + +G+ + S FHP +L TG+++ VK WD+++ + V
Sbjct: 178 LHEFKSH--EGKIQ---SLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRC 232
Query: 405 ISFSENGYYLATAAHDGVKL--WD 426
++F+ +G + + +K+ W+
Sbjct: 233 LTFNPDGKSVLCGLQESLKIFSWE 256
Score = 221 (82.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/237 (26%), Positives = 103/237 (43%)
Query: 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293
S V+ TGG D L+ + +L GHS + SV F L G+A T+++W
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD 87
Query: 294 GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGT 353
E TL H + +V H ++F + SLD +D+ C+
Sbjct: 88 LEEA---KVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK---- 140
Query: 354 DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYY 413
G G F PDG + +G + +VK+WD+ + + +F H G + ++ F + +
Sbjct: 141 -GHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFL 199
Query: 414 LATAAHDG-VKLWDLRKLKNFRSFESSDSETP-TNSVDFDHSG-SYLAVASADIRVY 467
LAT + D VK WDL + F S +ET + F+ G S L ++++
Sbjct: 200 LATGSADKTVKFWDL---ETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIF 253
Score = 216 (81.1 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 68/259 (26%), Positives = 118/259 (45%)
Query: 264 HSKKVTSVKFVTEGD-LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
HS V +K + + +TG D V +W G + +L H++ + +VT A+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWA---IGKPNAILSLYGHSSGIDSVTFDASE 71
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
+ T +DL + ++ G S FHP G +G+ + +K
Sbjct: 72 GLVAAGAASGTIKLWDLEEAKVVRTLT-----GHRSNCVSVNFHPFGEFFASGSLDTNLK 126
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDS 441
IWD++ + + + GH V + F+ +G ++ + D V K+WDL K F+S +
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG 186
Query: 442 ETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTG--KAT---CVKF 496
+ S+DF LA SAD +VK W+ ++TF +L G+G + T C+ F
Sbjct: 187 KI--QSLDFHPHEFLLATGSAD------KTVKF-WD-LETF-ELIGSGGTETTGVRCLTF 235
Query: 497 GPDAKYIAVGSMDRNLRVF 515
PD K + G + +L++F
Sbjct: 236 NPDGKSVLCG-LQESLKIF 253
Score = 139 (54.0 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 39/148 (26%), Positives = 67/148 (45%)
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDLRK 429
+L TG + V +W + + GH + +++F + G A AA +KLWDL +
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 90
Query: 430 LKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTG 489
K R+ S SV+F G + A S D + ++ ++ CI T+ T
Sbjct: 91 AKVVRTLTGHRSNCV--SVNFHPFGEFFASGSLDTNL-KIWDIRKK-GCIHTYK--GHTR 144
Query: 490 KATCVKFGPDAKYIAVGSMDRNLRVFGL 517
++F PD ++I G D ++V+ L
Sbjct: 145 GVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Score = 130 (50.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 38/164 (23%), Positives = 71/164 (43%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G G S F ++ G + +K+WD++ V GH +++F G +
Sbjct: 57 GHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFF 116
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +K+WD+RK +++ N + F G ++ V+ + V +V +
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGV--NVLRFTPDGRWI-VSGGEDNVVKVWDLT 173
Query: 474 ADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
A + F S GK + F P +A GS D+ ++ + L
Sbjct: 174 AG-KLLHEFK--SHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 214
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 219 (82.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 69/261 (26%), Positives = 124/261 (47%)
Query: 262 SGHSKKVTSVK-FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
+GH+K V++++ F G L L+ S D +++W+ + C T H+ V+ V +
Sbjct: 284 TGHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERR--CVRTFIGHSKAVRDVCFNN 341
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
+ F++A+ D +D +G C+++ ++ R Y F+PD +L G S
Sbjct: 342 SGTQFLSAAYDRYIKLWDSETGQCISRFTN-----RKVPYC-VKFNPDEDKQNLLVAGMS 395
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDLRKLKNFRSF 436
+ + WD++S V ++D H+GAV I+F EN +++T+ +++W+ +F+
Sbjct: 396 DKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFKYI 455
Query: 437 -ESSDSETPTNSVDFDHSGSYLAVASADIRVYQV-ASVKADWNCIKTFPDLSGTGKATCV 494
E S P +V +G +LA S D ++ A + N K F G A V
Sbjct: 456 AEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQV 513
Query: 495 KFGPDAKYIAVGSMDRNLRVF 515
F PD Y+ G D L ++
Sbjct: 514 DFSPDMSYVVSGDADGKLNIW 534
Score = 156 (60.0 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294
++++ G D V +D SG++V H V ++ FV E F++ S DK++RVW+
Sbjct: 387 QNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEW 446
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
D D K+ + + AVT+ K+ S+DN + + L +
Sbjct: 447 --DIPADFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKG 503
Query: 355 GRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGY 412
GY F PD + +G ++ + IWD K+ + H ++A+
Sbjct: 504 HMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCISALWHPHETS 563
Query: 413 YLATAAHDG-VKLWD 426
+ T DG +KLWD
Sbjct: 564 KVITCGWDGQIKLWD 578
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 208 (78.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 77/262 (29%), Positives = 121/262 (46%)
Query: 264 HSKKVTSV---KFVTEG-DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
H + SV K +G +L ++GS D V+VW+ S++ + + L+ H V +V V
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDE-RLEMQWALEGHQLGVVSVDVS 73
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
+ ++SLD +DL SG + + DAG P S AF PD L TG+
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRSI-DAG----PVDAWSVAFSPDSQHLATGSHVG 128
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFES 438
V I+ V++ D + +I++S +G YLA+ A DG+ ++D+ K + E
Sbjct: 129 KVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
Query: 439 SDSETPTNSVDFDHSGSYLAVASAD--IRVYQV--ASVKADWNCIKTFPDLSGTGKATC- 493
P S+ F L AS D I++Y V AS+ A LSG G
Sbjct: 189 H--AMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAAT---------LSGHGSWVLN 237
Query: 494 VKFGPDAKYIAVGSMDRNLRVF 515
V F PD + S D++++V+
Sbjct: 238 VAFSPDDAHFVSSSSDKSVKVW 259
Score = 193 (73.0 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 57/246 (23%), Positives = 115/246 (46%)
Query: 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
G+VS+D+ S +++A+ +D + L+D SG+ + ++ SV F + TGS
Sbjct: 66 GVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGS 125
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
V ++ G E G + ++L + ++ KY + ++D +D+++G
Sbjct: 126 HVGKVNIF-GVETGKKE--YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTA 404
L + +G S F D +L T + + +KI+DV+ + A GH V
Sbjct: 183 LHTL-----EGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLN 237
Query: 405 ISFS-ENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
++FS ++ +++++++ VK+WD+ +F D + V ++ +GS + D
Sbjct: 238 VAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTF--LDHQDQVWGVKYNRNGSKIVSVGDD 295
Query: 464 --IRVY 467
I VY
Sbjct: 296 QEIHVY 301
Score = 169 (64.5 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 61/260 (23%), Positives = 116/260 (44%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GH V SV G++ + S D +R+W E G ++ + +V
Sbjct: 60 LEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWD-LESGKQI--RSIDAGPVDAWSVAFSP 116
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+++ T S + + +G + D R + S A+ PDG L +G + +
Sbjct: 117 DSQHLATGSHVGKVNIFGVETG-----KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+ I+D+ + + +GH + +++FS + L TA+ DG +K++D++ + + S
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHA-SLAATLSG 230
Query: 440 DSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPD 499
N V F ++ +S+D V +V V A C+ TF L + VK+ +
Sbjct: 231 HGSWVLN-VAFSPDDAHFVSSSSDKSV-KVWDVSAR-TCVHTF--LDHQDQVWGVKYNRN 285
Query: 500 -AKYIAVGSMDRNLRVFGLP 518
+K ++VG D+ + V+ P
Sbjct: 286 GSKIVSVGD-DQEIHVYDCP 304
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/123 (29%), Positives = 52/123 (42%)
Query: 216 HPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT 275
H L + P I SL ++ T D ++D + TLSGH V +V F
Sbjct: 184 HTLEGHAMP-IRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSP 242
Query: 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWC 335
+ F++ S+DK+V+VW S C HT DH +V V + V+ D
Sbjct: 243 DDAHFVSSSSDKSVKVWDVSAR---TCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIH 299
Query: 336 FYD 338
YD
Sbjct: 300 VYD 302
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 79/345 (22%), Positives = 144/345 (41%)
Query: 176 AIIAELTDCNAALSQQRKKRQVPPALAPIDALER--YTQLASHPLHKTSKPGIVSLDIHY 233
+++ E + L ++R+K + LE+ Y + + K + ++ D
Sbjct: 21 SLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKVLCTDWSP 80
Query: 234 SKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293
K I + D +++D + ++ + + + + G+ G D V V+
Sbjct: 81 DKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYP 140
Query: 294 GSEDGNYDCK-HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAG 352
+ D K T+ HT+ + +++ +T S D+T +D+ SG L S G
Sbjct: 141 ITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQ--SFHG 198
Query: 353 TDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGY 412
G A + G +G+ + + IWD++S V F+GH V ++ F G
Sbjct: 199 HSGDVMAIDLAP-NETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGD 257
Query: 413 YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVAS 471
+AT + D +L+D+R + F NSVDF SG L D V +
Sbjct: 258 AIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDT 317
Query: 472 VKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+K++ C+ L G K +CV+ PD ++ GS D +RV+
Sbjct: 318 LKSERVCL-----LYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 215 (80.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 106/451 (23%), Positives = 190/451 (42%)
Query: 90 LEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVT---- 145
L+Q H Q + + + D R + + K+ + + Q +R+I AE V
Sbjct: 29 LKQLPHERLQAVLEKIPEEDLEVRRLLSILKKPEVVENEDVQ-QRRIRLAEILMVDEIDL 87
Query: 146 ---SNAALSNGKRAPEDED---LGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQV-- 197
+N NG+ E++D PA +L I L L ++ ++ Q
Sbjct: 88 ENINNMENINGEEVDEEDDEDFFTPATSELIFARRFLINYSLERSRKRLQKEMERHQKFN 147
Query: 198 --PPALAPIDALERYT--QLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRP 253
L+ L+R +LA L T KP I ++ + V+ATG + + +
Sbjct: 148 TRQELLSRRTELQRMANLELAGSQLVST-KP-ISAVSLSTDDMVVATGSWAGDLQVLNSQ 205
Query: 254 SGQIVTT-LSGHSKKVTSVKFVTEGDLFLTGSA-DKTVRVWQGS-EDGNYDCKHTLKDHT 310
+ Q +T L H K+ ++ + + + + A D ++ +Q S E+G L H
Sbjct: 206 TLQPLTQKLDSHVGKIGAIDWHPDSNNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHE 265
Query: 311 AEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370
+ V H + K+ +AS D TW +D S T +G +G S +F DG
Sbjct: 266 RRISDVKYHPSGKFIGSASHDMTWRLWDAS-----THQELLLQEGHDKGVFSLSFQCDGS 320
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRK 429
++ +G ++L +WD++S + V GH + +++S NGY +AT DG+ +WD+RK
Sbjct: 321 LVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRK 380
Query: 430 LKNFRSFESSDSETPTNSVDF--DHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDL 485
+ + V F + G L D I VY + W +K L
Sbjct: 381 RDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDT----W--LK-MGSL 433
Query: 486 SG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
+G T K + ++ ++ G DR+++++
Sbjct: 434 AGHTDKIISLDISNNSHFLVSGGWDRSIKLW 464
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 217 (81.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 64/241 (26%), Positives = 113/241 (46%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+ATG D ++D + I +GH + + S+ F +G +GS D+TVR+W E+
Sbjct: 361 LATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWD-IEN 419
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G T++D V V + KY SLD + +DL+ G + ++ G DG
Sbjct: 420 GTALTVFTIEDG---VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLE--GPDGHK 474
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDV-------KSQAN-----VAKFDGHVGAVTAI 405
+ S AF P+G L TG+ + +K+W++ ++Q + V F+GH V ++
Sbjct: 475 DSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSV 534
Query: 406 SFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADI 464
+ + + ++ + + D GV+ WD R + + SV +G + A S D+
Sbjct: 535 ALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVI--SVAPSPTGGFFATGSGDM 592
Query: 465 R 465
R
Sbjct: 593 R 593
Score = 194 (73.4 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 60/225 (26%), Positives = 105/225 (46%)
Query: 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG--ICLTQVSDAGTDGRPE 358
D HTL+ H + V V A KY T + F D+++G +C+ Q +A T G +
Sbjct: 291 DLVHTLQ-HESVVCCVRFSADGKYVATGCNRSAQIF-DVNTGEKVCVLQDDNADTTG--D 346
Query: 359 GYT-SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
Y S F PDG L TG + +++WD+ ++ +F GH + ++ F+ +G +A+
Sbjct: 347 LYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASG 406
Query: 418 AHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKA 474
+ D V+LWD+ F D T +V Y+A S D +RV+ +
Sbjct: 407 SGDRTVRLWDIENGTALTVFTIEDGVT---TVAISPDTKYVAAGSLDKSVRVWDLTQ--- 460
Query: 475 DWNC-IKTFPDLSGTGKAT-CVKFGPDAKYIAVGSMDRNLRVFGL 517
C ++ G + V F P+ + + GS+D+ ++++ L
Sbjct: 461 --GCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWEL 503
Score = 180 (68.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/222 (26%), Positives = 100/222 (45%)
Query: 218 LHKTSKPGIVSLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVT------ 269
+H +V + +S D +ATG + +A +FD +G+ V L + T
Sbjct: 293 VHTLQHESVVCC-VRFSADGKYVATG-CNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIR 350
Query: 270 SVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS 329
SV F +G TG+ DK +RVW + + H ++ ++ + + S
Sbjct: 351 SVCFSPDGKYLATGAEDKQIRVWDIT---TRTIRIQFAGHEQDIYSLDFARDGRTIASGS 407
Query: 330 LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQ 389
D T +D+ +G LT + +G T+ A PD + G+ + V++WD+
Sbjct: 408 GDRTVRLWDIENGTALTVFTIE------DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQG 461
Query: 390 ANVAKF---DGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
V + DGH +V +++FS NG L T + D +KLW+L
Sbjct: 462 CPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWEL 503
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 65/275 (23%), Positives = 121/275 (44%)
Query: 257 IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAE---- 312
+V TL H V V+F +G TG +++ +++ + G C L+D A+
Sbjct: 292 LVHTLQ-HESVVCCVRFSADGKYVATG-CNRSAQIFDVNT-GEKVC--VLQDDNADTTGD 346
Query: 313 --VQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370
+++V KY T + D +D+++ Q + G + S F DG
Sbjct: 347 LYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFA-----GHEQDIYSLDFARDGR 401
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRK 429
+ +G+ + V++WD+++ + F G VT ++ S + Y+A + D V++WDL +
Sbjct: 402 TIASGSGDRTVRLWDIENGTALTVFTIEDG-VTTVAISPDTKYVAAGSLDKSVRVWDLTQ 460
Query: 430 LKNFRSFESSDSETPT-NSVDFDHSGSYLAVASAD--IRVYQVASVKADWN--------C 478
E D + SV F +G L S D I+++++A+ + + C
Sbjct: 461 GCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRC 520
Query: 479 IKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLR 513
+KTF V PD +++ GS DR ++
Sbjct: 521 VKTFE--GHRDFVLSVALTPDNQWVMSGSKDRGVQ 553
Score = 148 (57.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG---HSKKVTSVKFVTEG 277
T + G+ ++ I +A G +D + ++D G V L G H V SV F G
Sbjct: 427 TIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNG 486
Query: 278 DLFLTGSADKTVRVW-----------QGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV 326
+TGS DKT+++W QGS+ G C T + H V +V + N++ +
Sbjct: 487 RDLVTGSLDKTIKLWELATPRGNMQNQGSKGGR--CVKTFEGHRDFVLSVALTPDNQWVM 544
Query: 327 TASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDV 386
+ S D F+D +G TQ+ G S A P G TG+ + +IW
Sbjct: 545 SGSKDRGVQFWDPRTGS--TQLM---LQGHKNSVISVAPSPTGGFFATGSGDMRARIWSY 599
Query: 387 KSQAN 391
N
Sbjct: 600 TRMDN 604
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 215 (80.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 72/291 (24%), Positives = 128/291 (43%)
Query: 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
G S+ Y+ + TGG D ++D SG ++ +L G + + + + +
Sbjct: 227 GCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAAT 286
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSSGI 343
+ + VW S G +HTL HT +V AV V ++++ V+A+ D T +DL G
Sbjct: 287 SSNNLFVWDVSS-GRV--RHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGY 343
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C V + DGL + +G + +++WD+++ +++ GH AVT
Sbjct: 344 CTNTVLFTSN------CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVT 397
Query: 404 AISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTN--SVDFDHSGSYLAVA 460
++S S NG + T+ D V ++D R L+ + +S + +N Y+A
Sbjct: 398 SVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAG 457
Query: 461 SADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRN 511
SAD V+ + K N + + T C + K +A S D+N
Sbjct: 458 SADGSVHVWSLSKG--NIVSILKEQ--TSPILCCSWSGIGKPLA--SADKN 502
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 62/268 (23%), Positives = 111/268 (41%)
Query: 261 LSGHSKKVTSVKF-VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
+ H S+ F G LF TG D+ V++W + G K +L + + V
Sbjct: 221 IHAHEGGCGSIVFEYNSGTLF-TGGQDRAVKMWD-TNSGTL-IK-SLYGSLGNILDMAVT 276
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
NK + A+ N +D+SSG + TD + + F ++ + +
Sbjct: 277 HDNKSVIAATSSNNLFVWDVSSGR-VRHTLTGHTD-KVCAVDVSKFSSRHVV--SAAYDR 332
Query: 380 LVKIWDVKSQ--ANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+K+WD+ N F + A I S +G + + DG ++LWD++ K
Sbjct: 333 TIKLWDLHKGYCTNTVLFTSNCNA---ICLSIDGLTVFSGHMDGNLRLWDIQTGKLLS-- 387
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNC--IKTFPD-LSGTGKATC 493
E + + SV +G+ + + D V+ V + C ++ + L+ +C
Sbjct: 388 EVAGHSSAVTSVSLSRNGNRILTSGRD-NVHNVFDTRTLEICGTLRASGNRLASNWSRSC 446
Query: 494 VKFGPDAKYIAVGSMDRNLRVFGLP-GN 520
+ PD Y+A GS D ++ V+ L GN
Sbjct: 447 IS--PDDDYVAAGSADGSVHVWSLSKGN 472
>RGD|1582817 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1582817 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 OrthoDB:EOG4R7V93 IPI:IPI00372838
RefSeq:NP_001162124.1 UniGene:Rn.208019 ProteinModelPortal:D3ZV54
PRIDE:D3ZV54 Ensembl:ENSRNOT00000001605 GeneID:690297
KEGG:rno:690297 UCSC:RGD:1582817 NextBio:740604 Uniprot:D3ZV54
Length = 920
Score = 219 (82.2 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 110/442 (24%), Positives = 191/442 (43%)
Query: 94 LHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALS-N 152
L++ Q+ + ++Q D + RLK R +L Q E++ E N +
Sbjct: 203 LYSLSQDGALCVWQCDTPPEGL-RLKAPRGWKADIL-QREKEEEEEEDEEGEGNRETTIR 260
Query: 153 GKRAPEDEDLGPAGKKLHTGITPAIIAELTDCN--AALSQQRKKRQVPPALAP-IDALER 209
GK P +++ GK ++ + + + D N A + +K + A I L
Sbjct: 261 GKAVPAEQER--VGKVKYSRLAKYFLNKEGDFNNLTAAAYHKKTHLLVTGFASGIFHLHE 318
Query: 210 YTQL-ASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVL-FDRPSGQIVTTLSGHSKK 267
+ H L S + S+ I+ S D IA G +L ++ S V GH
Sbjct: 319 LPEFNLIHSL-SISDQRVASVAINSSGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNS 377
Query: 268 VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVT 327
+ ++ + +G +TG D V+VW + G C TL +H++ V VT AT VT
Sbjct: 378 MVALAYSPDGQYIVTGGDDGKVKVWN-TLSGF--CFVTLTEHSSGVTGVTFTATGHVIVT 434
Query: 328 ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDV 386
+SLD T YDL + T RP ++ A G I+ G ++ + +W +
Sbjct: 435 SSLDGTVRAYDLHR----YRNFRTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEIFVWSM 490
Query: 387 KSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPT 445
++ + GH G ++ + F+ LA+A+ D V+LWD+ ++R+ E+ +
Sbjct: 491 QTGRLLDVLSGHEGPISGLCFNPMKSILASASWDKTVRLWDM--FDSWRTKETLSLTSDV 548
Query: 446 NSVDFDHSGSYLAVASADIRV--------YQVASVKADWNCIKTF-PDL-------SGTG 489
+V + G+ LAVA+ + ++ QV S++ + +KT +L S G
Sbjct: 549 LAVTYRPDGAELAVATLNSQITFWDPENAVQVGSIEGRHD-LKTGRKELDKITAKHSAKG 607
Query: 490 KA-TCVKFGPDAKYIAVGSMDR 510
KA T V + D + I G M +
Sbjct: 608 KAFTTVCYSADGQNILAGGMSK 629
Score = 166 (63.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 61/259 (23%), Positives = 113/259 (43%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
G +T+ + + L +TG A + + E ++ H+L V +V ++++
Sbjct: 288 GDFNNLTAAAYHKKTHLLVTGFASGIFHLHELPE---FNLIHSLSISDQRVASVAINSSG 344
Query: 323 KY--FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ F + L + S L Q G + A+ PDG + TG +
Sbjct: 345 DWIAFGCSGLGQLLVWEWQSESYVLKQ------QGHFNSMVALAYSPDGQYIVTGGDDGK 398
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
VK+W+ S H VT ++F+ G+ + T++ DG V+ +DL + +NFR+F +S
Sbjct: 399 VKVWNTLSGFCFVTLTEHSSGVTGVTFTATGHVIVTSSLDGTVRAYDLHRYRNFRTF-TS 457
Query: 440 DSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGP 498
T + V D SG ++ + D V S++ + LSG G + + F P
Sbjct: 458 PRPTQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQTG----RLLDVLSGHEGPISGLCFNP 513
Query: 499 DAKYIAVGSMDRNLRVFGL 517
+A S D+ +R++ +
Sbjct: 514 MKSILASASWDKTVRLWDM 532
Score = 122 (48.0 bits), Expect = 0.00071, P = 0.00071
Identities = 50/208 (24%), Positives = 96/208 (46%)
Query: 207 LERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAV-LFDRPSGQIVTTLSGHS 265
L RY + + ++ V++D S ++++ G D+ + ++ +G+++ LSGH
Sbjct: 446 LHRYRNFRTFTSPRPTQFSCVAVDS--SGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHE 503
Query: 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYF 325
++ + F + + S DKTVR+W + ++ K TL T++V AVT
Sbjct: 504 GPISGLCFNPMKSILASASWDKTVRLWDMFD--SWRTKETLS-LTSDVLAVTYRPDGAEL 560
Query: 326 VTASLDNTWCFYDLSSGICLTQVS---DAGTDGRPE-------------GYTSAAFHPDG 369
A+L++ F+D + + + + D T GR E +T+ + DG
Sbjct: 561 AVATLNSQITFWDPENAVQVGSIEGRHDLKT-GRKELDKITAKHSAKGKAFTTVCYSADG 619
Query: 370 L-ILGTGTSEALVKIWDVKSQANVAKFD 396
IL G S+ V ++ V+ Q V +F+
Sbjct: 620 QNILAGGMSK-FVCLYHVREQILVKRFE 646
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 206 (77.6 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 70/239 (29%), Positives = 111/239 (46%)
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
++GS D V+VW+ +++ D + TL+ H V +V + T ++SLD +DL
Sbjct: 36 ISGSLDDLVKVWKWNDE-KLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLE 94
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+G + + DAG P S AF PD L TG+ V I+ V++ D
Sbjct: 95 TGKQIKSI-DAG----PVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGK 149
Query: 401 AVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAV 459
+ +I++S +G YLA+ A DG+ ++D+ K + E P S+ F L
Sbjct: 150 FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH--AMPIRSLTFSPDSQLLVT 207
Query: 460 ASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC-VKFGPDAKYIAVGSMDRNLRVF 515
AS D I++Y V N T LSG G V F PD + S D++++V+
Sbjct: 208 ASDDGYIKIYDVQHA----NLAGT---LSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Score = 185 (70.2 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 57/247 (23%), Positives = 115/247 (46%)
Query: 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
G+VS+DI ++ + A+ +D + L+D +G+ + ++ S+ F + TGS
Sbjct: 66 GVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGS 125
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
V ++ G E G + ++L + ++ KY + ++D +D+++G
Sbjct: 126 HVGKVNIF-GVETGKKE--YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVA-KFDGHVGAVT 403
L + +G S F PD +L T + + +KI+DV+ AN+A GH V
Sbjct: 183 LHTL-----EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGTLSGHGSWVL 236
Query: 404 AISFS-ENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA 462
++F ++ +++++++ VK+WD +F D + V ++ SGS +
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTF--FDHQDQVWGVKYNGSGSKIVSVGD 294
Query: 463 D--IRVY 467
D I +Y
Sbjct: 295 DQEIHIY 301
Score = 165 (63.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 61/263 (23%), Positives = 117/263 (44%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH V SV G + + S D +R+W E G K ++ + ++
Sbjct: 59 TLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWD-LETGK-QIK-SIDAGPVDAWSLAFS 115
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
+++ T S + + +G + D R + S A+ PDG L +G +
Sbjct: 116 PDSQFLATGSHVGKVNIFGVETG-----KKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438
++ I+D+ + + +GH + +++FS + L TA+ DG +K++D++ N S
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAGTLS 229
Query: 439 SDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKF 496
N V F ++ +S+D ++V+ A + C+ TF D + VK+
Sbjct: 230 GHGSWVLN-VAFCPDDTHFVSSSSDKSVKVWD-AGTRT---CVHTFFDHQD--QVWGVKY 282
Query: 497 -GPDAKYIAVGSMDRNLRVFGLP 518
G +K ++VG D+ + ++ P
Sbjct: 283 NGSGSKIVSVGD-DQEIHIYDCP 304
Score = 134 (52.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 216 HPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT 275
H L + P I SL ++ T D ++D + TLSGH V +V F
Sbjct: 184 HTLEGHAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCP 242
Query: 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWC 335
+ F++ S+DK+V+VW G C HT DH +V V + + V+ D
Sbjct: 243 DDTHFVSSSSDKSVKVWDA---GTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIH 299
Query: 336 FYD 338
YD
Sbjct: 300 IYD 302
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 206 (77.6 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 70/239 (29%), Positives = 111/239 (46%)
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
++GS D V+VW+ +++ D + TL+ H V +V + T ++SLD +DL
Sbjct: 36 ISGSLDDLVKVWKWNDE-KLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLE 94
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+G + + DAG P S AF PD L TG+ V I+ V++ D
Sbjct: 95 TGKQIKSI-DAG----PVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGK 149
Query: 401 AVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAV 459
+ +I++S +G YLA+ A DG+ ++D+ K + E P S+ F L
Sbjct: 150 FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH--AMPIRSLTFSPDSQLLVT 207
Query: 460 ASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC-VKFGPDAKYIAVGSMDRNLRVF 515
AS D I++Y V N T LSG G V F PD + S D++++V+
Sbjct: 208 ASDDGYIKIYDVQHA----NLAGT---LSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Score = 185 (70.2 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 57/247 (23%), Positives = 115/247 (46%)
Query: 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
G+VS+DI ++ + A+ +D + L+D +G+ + ++ S+ F + TGS
Sbjct: 66 GVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGS 125
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
V ++ G E G + ++L + ++ KY + ++D +D+++G
Sbjct: 126 HVGKVNIF-GVETGKKE--YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVA-KFDGHVGAVT 403
L + +G S F PD +L T + + +KI+DV+ AN+A GH V
Sbjct: 183 LHTL-----EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGTLSGHGSWVL 236
Query: 404 AISFS-ENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA 462
++F ++ +++++++ VK+WD +F D + V ++ SGS +
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTF--FDHQDQVWGVKYNGSGSKIVSVGD 294
Query: 463 D--IRVY 467
D I +Y
Sbjct: 295 DQEIHIY 301
Score = 165 (63.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 61/263 (23%), Positives = 117/263 (44%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH V SV G + + S D +R+W E G K ++ + ++
Sbjct: 59 TLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWD-LETGK-QIK-SIDAGPVDAWSLAFS 115
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
+++ T S + + +G + D R + S A+ PDG L +G +
Sbjct: 116 PDSQFLATGSHVGKVNIFGVETG-----KKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438
++ I+D+ + + +GH + +++FS + L TA+ DG +K++D++ N S
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAGTLS 229
Query: 439 SDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKF 496
N V F ++ +S+D ++V+ A + C+ TF D + VK+
Sbjct: 230 GHGSWVLN-VAFCPDDTHFVSSSSDKSVKVWD-AGTRT---CVHTFFDHQD--QVWGVKY 282
Query: 497 -GPDAKYIAVGSMDRNLRVFGLP 518
G +K ++VG D+ + ++ P
Sbjct: 283 NGSGSKIVSVGD-DQEIHIYDCP 304
Score = 134 (52.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 216 HPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT 275
H L + P I SL ++ T D ++D + TLSGH V +V F
Sbjct: 184 HTLEGHAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCP 242
Query: 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWC 335
+ F++ S+DK+V+VW G C HT DH +V V + + V+ D
Sbjct: 243 DDTHFVSSSSDKSVKVWDA---GTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIH 299
Query: 336 FYD 338
YD
Sbjct: 300 IYD 302
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 208 (78.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 80/306 (26%), Positives = 138/306 (45%)
Query: 234 SKDVIATGGVDTNAVLF-----DRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+ DVI T D + +L+ D+ G ++GHS V V ++G L+GS D
Sbjct: 27 NSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGE 86
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
+R+W + + HT +V +V N+ V+AS D T ++ + G C +
Sbjct: 87 LRLWDLATG---ESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTI 142
Query: 349 SDAGTDGRPEGYTSAAFHPDGLI--LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
S+A DG E + F P+ L+ + + + + VK+W++++ GH G + ++
Sbjct: 143 SEA--DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVA 200
Query: 407 FSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-I 464
S +G A+ DGV LWDL + K S E+ +S+ F + +L A+ + I
Sbjct: 201 VSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI---IHSLCFSPNRYWLCAATENSI 257
Query: 465 RVYQVAS------VKADWNCIKTFPDLS-GTGKAT----C--VKFGPDAKYIAVGSMDRN 511
R++ + S +K D D S G G T C + + D + G D
Sbjct: 258 RIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCTSLNWSADGNTLFSGYTDGV 317
Query: 512 LRVFGL 517
+RV+G+
Sbjct: 318 IRVWGI 323
Score = 183 (69.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 65/265 (24%), Positives = 116/265 (43%)
Query: 170 HTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSL 229
HT + AI + + + ++ R K + L D + Y +A + T V
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKED--KSYG-VAQRRM--TGHSHFVQ- 67
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G+ GH+K V SV F T+ ++ S D+
Sbjct: 68 DVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDR 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD---HTAEVQAVTVHATNKY--FVTASLDNTWCFYDLSSG 342
T+++W G +CK+T+ + H V V V+AS D T ++L +
Sbjct: 128 TIKLWNTL--G--ECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN- 182
Query: 343 ICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV 402
C + + AG G + A PDG + +G + ++ +WD+ + + +
Sbjct: 183 -CKLRNTLAGHSGY---LNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-SII 237
Query: 403 TAISFSENGYYLATAAHDGVKLWDL 427
++ FS N Y+L A + +++WDL
Sbjct: 238 HSLCFSPNRYWLCAATENSIRIWDL 262
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 213 (80.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 72/270 (26%), Positives = 125/270 (46%)
Query: 253 PSGQIVTTLSGHSKKVTSVK-FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
P QI SGH+K V++V+ F G L L+ S D +++W+ G+ C T H+
Sbjct: 142 PKKQI-HVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVY--GDRRCLRTFIGHSK 198
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-- 369
V+ + + F++A+ D +D +G C+++ ++ R Y F+PD
Sbjct: 199 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN-----RKVPYC-VKFNPDEDK 252
Query: 370 -LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDL 427
+ G S+ + WD++S V ++D H+GAV I F EN +++T+ +++W+
Sbjct: 253 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 312
Query: 428 RKLKNFRSF-ESSDSETPTNSVDFDHSGSYLAVASADIRVYQV-ASVKADWNCIKTFPDL 485
+F+ E S P +V +G +LA S D ++ A + N K F
Sbjct: 313 DIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGH 370
Query: 486 SGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
G A V F PD Y+ G + L ++
Sbjct: 371 MVAGYACQVDFSPDMSYVISGDGNGKLNIW 400
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 51/195 (26%), Positives = 82/195 (42%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294
+++ G D V +D SG+IV H V ++ FV E F++ S DK++RVW+
Sbjct: 253 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 312
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
D D K+ + + AVT+ K+ S+DN + + L +
Sbjct: 313 --DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKG 369
Query: 355 GRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGY 412
GY F PD + +G + IWD K+ ++F H + A+
Sbjct: 370 HMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETS 429
Query: 413 YLATAAHDG-VKLWD 426
+ T DG +KLWD
Sbjct: 430 KVITCGWDGLIKLWD 444
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 213 (80.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 72/270 (26%), Positives = 125/270 (46%)
Query: 253 PSGQIVTTLSGHSKKVTSVK-FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
P QI SGH+K V++V+ F G L L+ S D +++W+ G+ C T H+
Sbjct: 145 PKKQI-HVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVY--GDRRCLRTFIGHSK 201
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-- 369
V+ + + F++A+ D +D +G C+++ ++ R Y F+PD
Sbjct: 202 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN-----RKVPYC-VKFNPDEDK 255
Query: 370 -LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDL 427
+ G S+ + WD++S V ++D H+GAV I F EN +++T+ +++W+
Sbjct: 256 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 315
Query: 428 RKLKNFRSF-ESSDSETPTNSVDFDHSGSYLAVASADIRVYQV-ASVKADWNCIKTFPDL 485
+F+ E S P +V +G +LA S D ++ A + N K F
Sbjct: 316 DIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGH 373
Query: 486 SGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
G A V F PD Y+ G + L ++
Sbjct: 374 MVAGYACQVDFSPDMSYVISGDGNGKLNIW 403
Score = 158 (60.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 51/195 (26%), Positives = 82/195 (42%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294
+++ G D V +D SG+IV H V ++ FV E F++ S DK++RVW+
Sbjct: 256 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 315
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
D D K+ + + AVT+ K+ S+DN + + L +
Sbjct: 316 --DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKG 372
Query: 355 GRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGY 412
GY F PD + +G + IWD K+ ++F H + A+
Sbjct: 373 HMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETS 432
Query: 413 YLATAAHDG-VKLWD 426
+ T DG +KLWD
Sbjct: 433 KVITCGWDGLIKLWD 447
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 204 (76.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 67/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 17 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI 76
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ +T+S D T +D+ +G
Sbjct: 77 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETG--QQT 133
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
V AG G S + PDG +G +A +K+WDV+ F GH + A++F
Sbjct: 134 VGFAGHSG---DVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 190
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NGY T + D +L+DLR + + + SV F SG L D
Sbjct: 191 FPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 250
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++K D + D + +C+ D +A GS D L+++
Sbjct: 251 NIWDAMKGDRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 295
Score = 172 (65.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 63/266 (23%), Positives = 111/266 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 6 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 62
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ + LDN Y L + +VS G GY S F D I+ T + +
Sbjct: 63 PSGNFVACGGLDNICSIYSLKTREGNVRVSRE-LPGHT-GYLSCCRFLDDNQII-TSSGD 119
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + +G + A D +KLWD+R ++F
Sbjct: 120 TTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFI 179
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N+V F +G Y +D ++ ++AD + D G T V F
Sbjct: 180 GHESDI--NAVAFFPNG-YAFTTGSDDATCRLFDLRADQELLMYSHDNIICG-ITSVAFS 235
Query: 498 PDAKYIAVGSMDRNLRVF-GLPGNDA 522
+ + G D N ++ + G+ A
Sbjct: 236 RSGRLLLAGYDDFNCNIWDAMKGDRA 261
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 210 (79.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 69/310 (22%), Positives = 133/310 (42%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ SLD K+ I + D ++++ + Q + H V + F G G
Sbjct: 69 VYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMTCAFAPNGQSVACGGL 128
Query: 286 DKTVRVW----QGSEDGNYDCKHTLKDHTAEVQAVT-VHATNKYFVTASLDNTWCFYDLS 340
D ++ Q DGN L H V + V +T+S D T +D++
Sbjct: 129 DSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYVPDQETRLITSSGDQTCVLWDVT 188
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGL-ILGTGTSEALVKIWDVKSQANVAK-FDGH 398
+G ++ G S + + + +G+ +A V++WD++ + + + GH
Sbjct: 189 TGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATVRLWDIRIASRAVRTYHGH 248
Query: 399 VGAVTAISFSENGYYLATAAHDGV-KLWDLR---KLKNF-RSFESSDSETPT-NSVDFDH 452
G + ++ F +G T + DG +L+D+R +L+ + R + +D+E PT S+ F
Sbjct: 249 EGDINSVKFFPDGQRFGTGSDDGTCRLFDVRTGHQLQVYSREPDRNDNELPTVTSIAFSI 308
Query: 453 SGSYL--AVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDR 510
SG L ++ D V+ + N + + S G+ +C+ D + GS D+
Sbjct: 309 SGRLLFAGYSNGDCYVWDTLLAEVVLN-LGNLQN-SHEGRISCLGLSSDGSALCTGSWDK 366
Query: 511 NLRVFGLPGN 520
NL+++ G+
Sbjct: 367 NLKIWAFSGH 376
Score = 127 (49.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 58/225 (25%), Positives = 92/225 (40%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GHS KV S+ + E + ++ S D + VW H +K H V
Sbjct: 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK---THAIKLHCPWVMTCAFA 117
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLT---QVSDAGTDGRPEGYTSAA-FHPDGLI-LGT 374
+ LD+ ++L+S VS T G +GY S+ + PD L T
Sbjct: 118 PNGQSVACGGLDSACSIFNLNSQADRDGNIPVSRILT-GH-KGYVSSCQYVPDQETRLIT 175
Query: 375 GTSEALVKIWDVKSQANVAKF-----DGHVGAVTAISF-SENGYYLATAAHDG-VKLWDL 427
+ + +WDV + ++ F GH V ++S S N + + D V+LWD+
Sbjct: 176 SSGDQTCVLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATVRLWDI 235
Query: 428 R-KLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
R + R++ + + NSV F G S D R++ V
Sbjct: 236 RIASRAVRTYHGHEGDI--NSVKFFPDGQRFGTGSDDGTCRLFDV 278
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 115/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F + ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D HT V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DTIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +L+ +S +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D IRV+QV
Sbjct: 298 LFAGYTDNLIRVWQV 312
Score = 189 (71.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 65/263 (24%), Positives = 120/263 (45%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V A
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSA 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C + D D E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTIQD---DSHTEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ +VK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-MVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQV-ASVKADW--NCIKTFPDLSGTGKAT 492
+ D+ N++ F + +L A+ I+++ + + D I T + + T
Sbjct: 231 DGGDT---INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCT 287
Query: 493 CVKFGPDAKYIAVGSMDRNLRVF 515
+ + D + + G D +RV+
Sbjct: 288 SLAWSADGQTLFAGYTDNLIRVW 310
Score = 161 (61.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 67/269 (24%), Positives = 116/269 (43%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GHS VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSADNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVA-KFDGHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ + D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDT 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 179 (68.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 125 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 184
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 185 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 235
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 236 INALCFSPN-RYWLCAATGPSIKIWDLEG 263
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 206 (77.6 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 68 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 298 LFAGYTDNLVRVWQV 312
Score = 174 (66.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 66/265 (24%), Positives = 121/265 (45%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 115
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 116 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LV +W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 172 K-LVNVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 230
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 231 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 285
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 144 (55.7 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 49/219 (22%), Positives = 90/219 (41%)
Query: 305 TLKDHTAEVQAVTVHA-TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSA 363
TLK H V ++ HA T + F++ D T + L+ + G +
Sbjct: 10 TLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-V 422
DG +G+ + +++WD+ + +F GH V +++FS + + + + D +
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 129
Query: 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD----IRVYQVASVKADWNC 478
KLW+ + + + S SE + V F + S + S + V+ +A+ K
Sbjct: 130 KLWNTLGVCKYTVQDESHSEW-VSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCK----- 183
Query: 479 IKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+KT + TG V PD A G D ++ L
Sbjct: 184 LKT-NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 207 (77.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 68/278 (24%), Positives = 115/278 (41%)
Query: 154 KRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQL 213
++AP+ L H G +I + + +S R K + L P DA +
Sbjct: 4 QKAPQVTYLEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDAT---SPG 60
Query: 214 ASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF 273
+H K + + I + +G D L+D G GH++ V SV F
Sbjct: 61 KAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAF 120
Query: 274 VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKD---HTAEVQAVTVHATNKYFVTASL 330
++ ++GS D T++VW G +CK TL+ H V + V+ S
Sbjct: 121 SSDNRQIISGSRDATIKVWNTL--G--ECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSW 176
Query: 331 DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQ 389
DN +D+ S C ++D GY + PDG + +G + +W++ S
Sbjct: 177 DNKVKIWDIKSFKCNHTLTDH------TGYVNTVTISPDGSLCASGGKDTFACLWELSSG 230
Query: 390 ANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDL 427
+ K + + A++FS N Y+L+ A D + +WDL
Sbjct: 231 KPLYKLEAR-NTINALAFSPNKYWLSAATDDKIIIWDL 267
Score = 190 (71.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 61/213 (28%), Positives = 100/213 (46%)
Query: 258 VTTLSGHSKKVTSVKFVTEG-DLFLTGSADKTVRVWQGSE-DGNYDCK-H-TLKDHTAEV 313
V +L GH+ VTS+ E D ++ S DKTV VWQ + D K H +LK H+ V
Sbjct: 14 VGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFV 73
Query: 314 QAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG 373
Q V + ++ ++ S DNT +D++ G+ T++ G + S AF D +
Sbjct: 74 QDVVISHDGQFALSGSWDNTLRLWDITKGVS-TRLFK----GHTQDVMSVAFSSDNRQII 128
Query: 374 TGTSEALVKIWDVKSQANVAKF--DGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKL 430
+G+ +A +K+W+ + + H V+ I FS N + + + D VK+WD++
Sbjct: 129 SGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSF 188
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
K + +D N+V GS A D
Sbjct: 189 KCNHTL--TDHTGYVNTVTISPDGSLCASGGKD 219
Score = 147 (56.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 47/187 (25%), Positives = 82/187 (43%)
Query: 211 TQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG---HSKK 267
T+ S L K ++S+ I +G D +++ G+ TL G H
Sbjct: 100 TKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNT-LGECKFTLEGPEAHQDW 158
Query: 268 VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVT 327
V+ ++F ++GS D V++W + ++ C HTL DHT V VT+ +
Sbjct: 159 VSCIRFSPNTPTIVSGSWDNKVKIW---DIKSFKCNHTLTDHTGYVNTVTISPDGSLCAS 215
Query: 328 ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVK 387
D C ++LSSG L ++ T + AF P+ L T + ++ IWD+
Sbjct: 216 GGKDTFACLWELSSGKPLYKLEARNT------INALAFSPNKYWLSAATDDKII-IWDLL 268
Query: 388 SQANVAK 394
++ +A+
Sbjct: 269 TKQVLAE 275
>FB|FBgn0004623 [details] [associations]
symbol:Gbeta76C "G protein beta-subunit 76C" species:7227
"Drosophila melanogaster" [GO:0016059 "deactivation of rhodopsin
mediated signaling" evidence=IMP;TAS] [GO:0016056 "rhodopsin
mediated signaling pathway" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=NAS;IMP] [GO:0007602 "phototransduction"
evidence=IDA;IMP] [GO:0016028 "rhabdomere" evidence=IDA;TAS]
[GO:0005834 "heterotrimeric G-protein complex"
evidence=NAS;IDA;IPI] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=NAS] [GO:0007202 "activation of
phospholipase C activity" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007601
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0007202 GO:GO:0016028 GO:GO:0016056
PRINTS:PR00319 GO:GO:0016059 GO:GO:0005834
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K07972 EMBL:M76593 EMBL:AY118886 PIR:JU0269 RefSeq:NP_523720.2
UniGene:Dm.9760 ProteinModelPortal:P29829 SMR:P29829 IntAct:P29829
MINT:MINT-938155 STRING:P29829 PaxDb:P29829
EnsemblMetazoa:FBtr0074949 GeneID:40148 KEGG:dme:Dmel_CG8770
CTD:40148 FlyBase:FBgn0004623 InParanoid:P29829 OMA:KGHINKV
OrthoDB:EOG4SJ3W9 PhylomeDB:P29829 ChiTaRS:Gbeta76C
GenomeRNAi:40148 NextBio:817248 Bgee:P29829 GermOnline:CG8770
Uniprot:P29829
Length = 346
Score = 208 (78.3 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 54/189 (28%), Positives = 81/189 (42%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+ TG D +D G +GH+ + + + ++TGS DKT ++W E+
Sbjct: 163 LITGSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDVREE 222
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G+ K H +V +V H + F + S D T YDL + Q++ +
Sbjct: 223 GH---KQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYDLRAD---QQIAQYEPPQKN 276
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G+TS A G L G E V WD Q + GH +T IS NG LA+
Sbjct: 277 TGFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCISLCPNGMCLAST 336
Query: 418 AHDG-VKLW 425
+ D V+LW
Sbjct: 337 SWDQQVRLW 345
Score = 189 (71.6 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 62/257 (24%), Positives = 110/257 (42%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GH KV SV F + +TGS D + +W + + + +A V V
Sbjct: 55 LKGHINKVNSVHFAGDSRHCVTGSLDGKLIIW---DTWTANKVQIIPLRSAWVMTVAFSP 111
Query: 321 TNKYFVTASLDNTWCFYDLS----SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + +DN YD++ SG+ G +G +S F DG ++ TG+
Sbjct: 112 SGNFVACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGF---LSSCRFLDDGHLI-TGS 167
Query: 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSEN-GYYLATAAHDGVKLWDLRKLKNFRS 435
+ + WD++ F+GH G + +S S + Y+ + KLWD+R+ + +
Sbjct: 168 GDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDVREEGHKQM 227
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVK 495
F D + +SV + SG A S D + ++ ++AD + P TG +C
Sbjct: 228 FFGHDMDV--SSVCYHPSGFGFASCSED-QTARMYDLRADQQIAQYEPPQKNTGFTSCA- 283
Query: 496 FGPDAKYIAVGSMDRNL 512
+Y+ G ++ N+
Sbjct: 284 LSTSGRYLMCGGIEGNV 300
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 56/243 (23%), Positives = 108/243 (44%)
Query: 234 SKDVIATGGVDTNAVLFD---RP-SG--QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
S + +A GG+D ++D R SG ++V L G+ ++S +F+ +G L +TGS D
Sbjct: 112 SGNFVACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDDGHL-ITGSGDM 170
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
+ W E G H ++ +++ K ++T S+D T +D+ +
Sbjct: 171 KICHWD-LEKGVKTMD--FNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDVRE-----E 222
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG---HVGAVTA 404
G +S +HP G + + + +++D+++ +A+++ + G T+
Sbjct: 223 GHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYDLRADQQIAQYEPPQKNTG-FTS 281
Query: 405 ISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
+ S +G YL +G V WD K ++ + S E + +G LA S D
Sbjct: 282 CALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTL--SGHENRITCISLCPNGMCLASTSWD 339
Query: 464 IRV 466
+V
Sbjct: 340 QQV 342
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 215 (80.7 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 65/223 (29%), Positives = 101/223 (45%)
Query: 253 PSGQ-IVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
P+G+ T L GHS V S F GD L+ SAD T+R+W + N C K H
Sbjct: 405 PNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVC---YKGHNY 461
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
V YF + S D T + + L ++ G +HP+
Sbjct: 462 PVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMA-----GHLSDVDCVQWHPNCNY 516
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKL 430
+ TG+S+ V++WDV++ V F GH V +++ S +G Y+A+ DG + +WDL
Sbjct: 517 IATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTA 576
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471
+ +S S+ + GS LA SAD ++++ V S
Sbjct: 577 RCITPLMGHNS--CVWSLSYSGEGSLLASGSADCTVKLWDVTS 617
Score = 193 (73.0 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 59/219 (26%), Positives = 91/219 (41%)
Query: 210 YTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVT 269
YT L H S P + S D + + DT L+ + GH+ V
Sbjct: 411 YTLLLGH-----SGP-VYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVW 464
Query: 270 SVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTAS 329
+F G F + S D+T R+W S D + + H ++V V H Y T S
Sbjct: 465 DAQFSPFGHYFASCSHDRTARIW--SMDRIQPLR-IMAGHLSDVDCVQWHPNCNYIATGS 521
Query: 330 LDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQ 389
D T +D+ +G C+ G S A PDG + +G + + +WD+ +
Sbjct: 522 SDKTVRLWDVQTGECVRIFI-----GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTA 576
Query: 390 ANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDL 427
+ GH V ++S+S G LA+ + D VKLWD+
Sbjct: 577 RCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 158 (60.7 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 244 DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303
D A ++ Q + ++GH V V++ + TGS+DKTVR+W + G +C
Sbjct: 481 DRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWD-VQTG--ECV 537
Query: 304 HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSA 363
H + V ++ + +Y + D T +DLS+ C+T + G S
Sbjct: 538 RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM-----GHNSCVWSL 592
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAK 394
++ +G +L +G+++ VK+WDV S + K
Sbjct: 593 SYSGEGSLLASGSADCTVKLWDVTSSTKLTK 623
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/159 (23%), Positives = 78/159 (49%)
Query: 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG 421
SA F P G + + +++ +++W K AN+ + GH V FS G+Y A+ +HD
Sbjct: 423 SATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDR 482
Query: 422 V-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNC 478
++W + +++ R S+ + V + + +Y+A S+D +R++ V + + C
Sbjct: 483 TARIWSMDRIQPLRIMAGHLSDV--DCVQWHPNCNYIATGSSDKTVRLWDVQTGE----C 536
Query: 479 IKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
++ F + + PD +Y+A G D + ++ L
Sbjct: 537 VRIF--IGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL 573
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 206 (77.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F ++ ++GS DK
Sbjct: 71 DVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 130
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D H+ V V + +++N V+ D ++L++
Sbjct: 131 TIKLWNTL--GV--CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-- 184
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C + + G G T + PDG + +G + +WD+ ++ DG +
Sbjct: 185 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIIN 240
Query: 404 AISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGSY 456
A+ FS N Y+L A +K+WDL +LK SS +E P S+ + G
Sbjct: 241 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 300
Query: 457 LAVASAD--IRVYQV 469
L D +RV+QV
Sbjct: 301 LFAGYTDNLVRVWQV 315
Score = 179 (68.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 67/265 (25%), Positives = 122/265 (46%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GHS V+ V ++G L+GS D T+R+W + G + HT +V +V +
Sbjct: 62 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT-GTTTRRFV--GHTKDVLSVAFSS 118
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGTS 377
N+ V+ S D T ++ + G+C V D + E + F P+ +I+ G
Sbjct: 119 DNRQIVSGSRDKTIKLWN-TLGVCKYTVQD---ESHSEWVSCVRFSPNSSNPIIVSCGWD 174
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSF 436
+ LVK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 175 K-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 233
Query: 437 ESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQVASVKADWNCIKTFPDLSGTGKA---- 491
+ D N++ F + +L A+ I+++ + K + +K +S + KA
Sbjct: 234 DGGDI---INALCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQ-EVISTSSKAEPPQ 288
Query: 492 -TCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 289 CTSLAWSADGQTLFAGYTDNLVRVW 313
Score = 151 (58.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 66/269 (24%), Positives = 115/269 (42%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VT + + D+ L+ S DKT+ +W+ + D NY + L+ H+ V V
Sbjct: 13 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 72
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ S D T +DL++G + G + S AF D + +G+
Sbjct: 73 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGS 127
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLR--KL 430
+ +K+W+ D H V+ + FS N + + D VK+W+L KL
Sbjct: 128 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 187
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK 490
K + T T S D GS A D + ++ D N K L G
Sbjct: 188 KTNHIGHTGYLNTVTVSPD----GSLCASGGKDGQ-----AMLWDLNEGKHLYTLDGGDI 238
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
+ F P+ +Y + +++++ L G
Sbjct: 239 INALCFSPN-RYWLCAATGPSIKIWDLEG 266
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 214 (80.4 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 79/302 (26%), Positives = 128/302 (42%)
Query: 222 SKPGIVSLD-IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF 280
SKP + + IH D + D A +R L GH V S +F+ +
Sbjct: 303 SKPHQIDVSHIHLINDTLEVDEEDRTAT--ERK------VLLGHCGPVYSTRFLPDSSAL 354
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WCFY 337
L+ S D ++R W N + H V + + + +F +AS D+T W F
Sbjct: 355 LSCSEDTSIRYWDLESFTN---TVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSF- 410
Query: 338 DLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG 397
D + + + AG D FHP+ L TG+++ V++W + +V F G
Sbjct: 411 DRTYPLRIYAGHLAGVD-------CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTG 463
Query: 398 HVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456
H G V ++FS NG YL +A D + KLWDL ++ + SV F S
Sbjct: 464 HCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDI--TSVTFSLDSSV 521
Query: 457 LAVASAD--IRVYQVASVKADWNCIKTFPDLSG--TGKATCV---KFGPDAKYIAVGSMD 509
+A AS D +R++ + S + +L G TG+ + V +F ++ + G +
Sbjct: 522 IASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTVLNVQFMAGSRLLVTGIRE 581
Query: 510 RN 511
N
Sbjct: 582 EN 583
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLW 425
P L + + + ++W + + GH+ V + F N YLAT + D V+LW
Sbjct: 391 PHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLW 450
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
++ + R F P + F +G YL A D ++++ +AS +
Sbjct: 451 SAQQGNSVRLFTGHCG--PVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTL-------YK 501
Query: 484 DLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGLPG--NDAPSE 525
DL G T T V F D+ IA SMD ++R++ + N P++
Sbjct: 502 DLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPAD 546
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 212 (79.7 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 75/276 (27%), Positives = 114/276 (41%)
Query: 205 DALERYTQLASHPLHKTSKPGIVS----LDIHYSKDVIATGGVDTNAVLFDRPSGQIVTT 260
D + + LAS L K S G VS + + + + G D +D +++
Sbjct: 193 DRVIKIWDLASGKL-KLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRH 251
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
GH V S+ D+ T D T R+W N HTL HT V +V A
Sbjct: 252 YHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANV---HTLTGHTNTVASVVAQA 308
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
TN +T S D+T +DL++G + +++ + S HP L + S
Sbjct: 309 TNPQIITGSHDSTVRLWDLAAGKSVCTLTN-----HKKSVRSIVLHPS-LYMFASASPDN 362
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFE--- 437
+K W V GH V ++ + G ++ + + WD R NF+ F+
Sbjct: 363 IKQWRCPEGKFVQNISGHTSIVNCMAANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAPV 422
Query: 438 ---SSDSETPTNSVDFDHSGSYLAVASAD--IRVYQ 468
S DSE ++ FD SGS L A AD I+VY+
Sbjct: 423 QPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVYK 458
Score = 164 (62.8 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 77/352 (21%), Positives = 150/352 (42%)
Query: 83 LMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAEST 142
L +SN ++ ++L ++ D V+ ++ K + ++ AQ+ A +
Sbjct: 25 LFVSNQGNLPEIDERLEKLRRSIKAKDGYGLVLDKVAKIGEARKASGAQTPGDKTLAITD 84
Query: 143 AVTSNAALSNGKRAPEDEDLGPAGKK--LHTGITPAII-AELTDCNAALSQQ---RKKRQ 196
++AA G + PA K L TG +++ A L + NA +S Q
Sbjct: 85 GSATDAASGAGSLVKYNAGARPAEKTAPLVTGTHTSLVRASLANSNADMSANGAIASHLQ 144
Query: 197 VPPALAPIDALERYTQLASHPLHK--TSKPGIVS-LDIHYSKDVIATGGVDTNAVLFDRP 253
+ P AP ++ + A L + + G V + + + ATG D ++D
Sbjct: 145 LIPKKAP--SIPKPKWHAPWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLA 202
Query: 254 SGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEV 313
SG++ +L+GH V V T+ + D+ V+ W + N +H H + V
Sbjct: 203 SGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWD--LEYNKVIRH-YHGHLSAV 259
Query: 314 QAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG 373
++ +H T T+ D+T +D+ + + ++ G + A +P I+
Sbjct: 260 YSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLT--GHTNTVASVVAQATNPQ--II- 314
Query: 374 TGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLW 425
TG+ ++ V++WD+ + +V H +V +I + Y A+A+ D +K W
Sbjct: 315 TGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDNIKQW 366
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 207 (77.9 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 54/190 (28%), Positives = 86/190 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I T DT L+D +GQ TT +GH+ V S+ + LF++G+ D + ++W E
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G C+ T H +++ A+ F T S D T +DL + L S D
Sbjct: 216 GM--CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSH---DNII 270
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G TS AF G +L G + +WD GH V+ + +++G +AT
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 418 AHDG-VKLWD 426
+ D +K+W+
Sbjct: 331 SWDSFLKIWN 340
Score = 192 (72.6 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 69/289 (23%), Positives = 115/289 (39%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ VT+S D T +D+ +G T
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTT 179
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
AG G S + PD + +G +A K+WDV+ F GH + AI F
Sbjct: 180 F--AGHTG---DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NG AT + D +L+DLR + + + SV F SG L D
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++KAD + D + +C+ D +A GS D L+++
Sbjct: 295 NVWDALKADRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 170 (64.9 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 62/258 (24%), Positives = 108/258 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ Y LDN Y+L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRE-LAGHT-GYLSCCRFLDDNQIV-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + + + A D KLWD+R+ ++F
Sbjct: 164 TTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N++ F +G+ A S D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAICFFPNGNAFATGSDDATC-RLFDLRADQELMVYSHDNIICG-ITSVAFS 279
Query: 498 PDAKYIAVGSMDRNLRVF 515
+ + G D N V+
Sbjct: 280 KSGRLLLAGYDDFNCNVW 297
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 47/189 (24%), Positives = 83/189 (43%)
Query: 200 ALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT 259
AL I+ ++ T A H T ++SL + + +G D +A L+D G
Sbjct: 167 ALWDIETGQQTTTFAGH----TGD--VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ 220
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
T +GH + ++ F G+ F TGS D T R++ D D + + H + +T
Sbjct: 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLF----DLRADQELMVYSHDNIICGITSV 276
Query: 320 ATNKY--FVTASLDNTWCFYDLSSGICLTQVSD-AGTDGRPEGYTSAAFHPDGLILGTGT 376
A +K + A D+ C ++ + + AG D R + DG+ + TG+
Sbjct: 277 AFSKSGRLLLAGYDDFNC--NVWDALKADRAGVLAGHDNR---VSCLGVTDDGMAVATGS 331
Query: 377 SEALVKIWD 385
++ +KIW+
Sbjct: 332 WDSFLKIWN 340
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 213 (80.0 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 87/363 (23%), Positives = 160/363 (44%)
Query: 157 PEDED--LGPAGK-KLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQL 213
PED + LGP GK + + E + + LS++ K+ ++P P++ E+ T
Sbjct: 183 PEDIEGFLGPWGKFENEVSVAKPNEQERAELDELLSKRHKRGRIPED-KPLE--EKSTL- 238
Query: 214 ASHPLHKTSKPGIVSLDIHYSKDV-IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVK 272
H G L + V + + T L P I T SGH+K ++S++
Sbjct: 239 --HIKDAYDYQGRSYLHAPHDLGVNLRSNAPPTKCFL---PKAHI-HTWSGHNKGISSIR 292
Query: 273 -FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLD 331
F L L+GS D V++W+ G C T H ++ + + F++AS D
Sbjct: 293 WFPKTAHLLLSGSMDCRVKLWEVY--GERRCIRTFSGHRQAIKDIAWNNRGTNFLSASYD 350
Query: 332 NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL---ILGTGTSEALVKIWDVKS 388
+D +G +++ + T P FHPD + GTS+ + WD +S
Sbjct: 351 RYIKLWDAETGDVVSRFT---TRKMP---FCVKFHPDNSKQHLFVAGTSDKKIICWDTRS 404
Query: 389 QANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNS 447
V ++D H+G+V+ I+F +N ++ T+ +++W+ + + + + + +
Sbjct: 405 GDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDIPVDMK-YIADPTMHSMPA 463
Query: 448 VDFDHSGSYLAVASADIRVYQVASV-KADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVG 506
V +G ++A S D ++ +++ + N KTF +G A + F PD Y+ G
Sbjct: 464 VTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGYACQLDFSPDMSYLVSG 523
Query: 507 SMD 509
D
Sbjct: 524 DGD 526
Score = 175 (66.7 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 52/193 (26%), Positives = 81/193 (41%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
+ G D + +D SG IV H V+++ FV + F+T S DK++R+W+
Sbjct: 387 LFVAGTSDKKIICWDTRSGDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEW-- 444
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
D D K+ + AVT+ K+ SLDN + + + + T
Sbjct: 445 DIPVDMKYIADPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNR-KKTFTGHM 503
Query: 357 PEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGYYL 414
GY F PD L +G + IWD K+ K+ H G ++A+ +
Sbjct: 504 VSGYACQLDFSPDMSYLVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHEASKV 563
Query: 415 ATAAHDG-VKLWD 426
TA DG +K WD
Sbjct: 564 VTAGWDGQIKYWD 576
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 50/224 (22%), Positives = 94/224 (41%)
Query: 249 LFDRPSGQIVTTLSGHSKKVTSVKFVTEGD---LFLTGSADKTVRVWQGSEDGNYDCKHT 305
L+D +G +V+ + K VKF + LF+ G++DK + W + G D
Sbjct: 355 LWDAETGDVVSRFTTR-KMPFCVKFHPDNSKQHLFVAGTSDKKIICWD-TRSG--DIVQE 410
Query: 306 LKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAF 365
H V +T N+ FVT S D + ++ + + ++D P +
Sbjct: 411 YDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDIPVDMKYIADPTMHSMP----AVTL 466
Query: 366 HPDGLILGTGTSEALVKIWDV--KSQANVAK-FDGHV--GAVTAISFSENGYYLATAAHD 420
P+G + + + + I+ + + N K F GH+ G + FS + YL + D
Sbjct: 467 APNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGYACQLDFSPDMSYLVSGDGD 526
Query: 421 G-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
G +WD + K ++ +++ D +++ H S + A D
Sbjct: 527 GKCYIWDWKTTKMYKKWQAHDGVC-ISALWHPHEASKVVTAGWD 569
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 213 (80.0 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 72/270 (26%), Positives = 125/270 (46%)
Query: 253 PSGQIVTTLSGHSKKVTSVK-FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
P QI SGH+K V++V+ F G L L+ S D +++W+ G+ C T H+
Sbjct: 277 PKKQI-HVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVY--GDRRCLRTFIGHSK 333
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-- 369
V+ + + F++A+ D +D +G C+++ ++ R Y F+PD
Sbjct: 334 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN-----RKVPYC-VKFNPDEDK 387
Query: 370 -LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDL 427
+ G S+ + WD++S V ++D H+GAV I F EN +++T+ +++W+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 428 RKLKNFRSF-ESSDSETPTNSVDFDHSGSYLAVASADIRVYQV-ASVKADWNCIKTFPDL 485
+F+ E S P +V +G +LA S D ++ A + N K F
Sbjct: 448 DIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGH 505
Query: 486 SGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
G A V F PD Y+ G + L ++
Sbjct: 506 MVAGYACQVDFSPDMSYVISGDGNGKLNIW 535
Score = 158 (60.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 51/195 (26%), Positives = 82/195 (42%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294
+++ G D V +D SG+IV H V ++ FV E F++ S DK++RVW+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
D D K+ + + AVT+ K+ S+DN + + L +
Sbjct: 448 --DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKG 504
Query: 355 GRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGY 412
GY F PD + +G + IWD K+ ++F H + A+
Sbjct: 505 HMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETS 564
Query: 413 YLATAAHDG-VKLWD 426
+ T DG +KLWD
Sbjct: 565 KVITCGWDGLIKLWD 579
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 213 (80.0 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 72/270 (26%), Positives = 125/270 (46%)
Query: 253 PSGQIVTTLSGHSKKVTSVK-FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
P QI SGH+K V++V+ F G L L+ S D +++W+ G+ C T H+
Sbjct: 277 PKKQI-HVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVY--GDRRCLRTFIGHSK 333
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-- 369
V+ + + F++A+ D +D +G C+++ ++ R Y F+PD
Sbjct: 334 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN-----RKVPYC-VKFNPDEDK 387
Query: 370 -LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDL 427
+ G S+ + WD++S V ++D H+GAV I F EN +++T+ +++W+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 428 RKLKNFRSF-ESSDSETPTNSVDFDHSGSYLAVASADIRVYQV-ASVKADWNCIKTFPDL 485
+F+ E S P +V +G +LA S D ++ A + N K F
Sbjct: 448 DIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGH 505
Query: 486 SGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
G A V F PD Y+ G + L ++
Sbjct: 506 MVAGYACQVDFSPDMSYVISGDGNGKLNIW 535
Score = 158 (60.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 51/195 (26%), Positives = 82/195 (42%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294
+++ G D V +D SG+IV H V ++ FV E F++ S DK++RVW+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
D D K+ + + AVT+ K+ S+DN + + L +
Sbjct: 448 --DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKG 504
Query: 355 GRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGY 412
GY F PD + +G + IWD K+ ++F H + A+
Sbjct: 505 HMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETS 564
Query: 413 YLATAAHDG-VKLWD 426
+ T DG +KLWD
Sbjct: 565 KVITCGWDGLIKLWD 579
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 213 (80.0 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 72/270 (26%), Positives = 125/270 (46%)
Query: 253 PSGQIVTTLSGHSKKVTSVK-FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
P QI SGH+K V++V+ F G L L+ S D +++W+ G+ C T H+
Sbjct: 277 PKKQI-HVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVY--GDRRCLRTFIGHSK 333
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-- 369
V+ + + F++A+ D +D +G C+++ ++ R Y F+PD
Sbjct: 334 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN-----RKVPYC-VKFNPDEDK 387
Query: 370 -LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDL 427
+ G S+ + WD++S V ++D H+GAV I F EN +++T+ +++W+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 428 RKLKNFRSF-ESSDSETPTNSVDFDHSGSYLAVASADIRVYQV-ASVKADWNCIKTFPDL 485
+F+ E S P +V +G +LA S D ++ A + N K F
Sbjct: 448 DIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGH 505
Query: 486 SGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
G A V F PD Y+ G + L ++
Sbjct: 506 MVAGYACQVDFSPDMSYVISGDGNGKLNIW 535
Score = 158 (60.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 51/195 (26%), Positives = 82/195 (42%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294
+++ G D V +D SG+IV H V ++ FV E F++ S DK++RVW+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
D D K+ + + AVT+ K+ S+DN + + L +
Sbjct: 448 --DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKG 504
Query: 355 GRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGY 412
GY F PD + +G + IWD K+ ++F H + A+
Sbjct: 505 HMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETS 564
Query: 413 YLATAAHDG-VKLWD 426
+ T DG +KLWD
Sbjct: 565 KVITCGWDGLIKLWD 579
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 212 (79.7 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 79/327 (24%), Positives = 146/327 (44%)
Query: 122 RDEARSLLAQ-SERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAE 180
RD R LL +E+Q A + A + ++E +L
Sbjct: 92 RDRLRELLTDIAEKQEAAAAEDIEMAEAGGEEDEGEQQEEFYTEGSDELLKARKAIARFS 151
Query: 181 LTDCNAALSQQRKKRQVP--PALAPIDALERYTQLASHPLHKTSKPGIVSLDI-HYSKD- 236
L A +++QR++ +P + A++ +L + L+ + G + I ++ D
Sbjct: 152 LPRAKARVARQREESTIPLRTHIKHRKAIKE--KLHNFDLYGSQIAGDRPVSICRFAPDG 209
Query: 237 -VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
IATG L P+ + ++ GH+ +V + + L + ++ V G
Sbjct: 210 QTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAVNFVSGG 269
Query: 296 EDGNYDC-----KH----TLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT 346
+GN C K TL+ H+ V H + KY +AS D TW +D+ + L
Sbjct: 270 GEGNV-CLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTAEL- 327
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
Q+ + + E YT AF+ DG +L +G +++ ++WD+++ V +GH+ + +
Sbjct: 328 QLQEGHSR---EVYT-VAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLD 383
Query: 407 FSENGYYLATAAHDG-VKLWDLRKLKN 432
+ +GY + + + DG VK WDLR++KN
Sbjct: 384 WGVDGYRVLSGSGDGWVKCWDLRQVKN 410
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 66/299 (22%), Positives = 117/299 (39%)
Query: 224 PGIVSLDIHYSKDVI--ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
PG + + S+ + +GG + N L+ Q + TL GHS +V +F G
Sbjct: 249 PGATLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIA 308
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+ S D T R+W + + H+ EV V + + LD+ +DL +
Sbjct: 309 SASYDTTWRLWDVETTAELQLQ---EGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRT 365
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
G + + +G + DG + +G+ + VK WD++ N H
Sbjct: 366 GRTVMIL-----EGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSV 420
Query: 402 VTAISF---SENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLA 458
V+ + + SE+ +L T ++ D + T V SG++
Sbjct: 421 VSDVRWYKGSESASFLPTTEGQPGRM---------------DVDGATAPVQPRKSGTFFV 465
Query: 459 VASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+ D V + S DW+ IKT SG +A++IA DR ++++G+
Sbjct: 466 SSGFDKNV-NIFSAD-DWSLIKTLSGHSGN--VLSADISNNAQWIASCGHDRTVKLWGI 520
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 213 (80.0 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 67/226 (29%), Positives = 105/226 (46%)
Query: 251 DRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHT 310
D G + L GH V S +F+ + L+ S D ++R W + G++ + H
Sbjct: 328 DDDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW---DLGSFTNTVLYQGHA 384
Query: 311 AEVQAVTVHATNKYFVTASLDNT---WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP 367
V V + + YF + S D T W F D + + + A D FHP
Sbjct: 385 YPVWDVDISPYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVD-------CVKFHP 436
Query: 368 DGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWD 426
+ L TG+++ V++W + +V F GH G V +++FS NG YLA+A D +KLWD
Sbjct: 437 NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 496
Query: 427 LRKLKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
L F+ +D+ T S+ F S +A AS D +RV+ +
Sbjct: 497 LASGTLFKELRGHTDNIT---SLTFSPDSSLIASASMDNSVRVWDI 539
Score = 188 (71.2 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 55/191 (28%), Positives = 85/191 (44%)
Query: 255 GQIVTTL--SGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAE 312
G T+ GH+ V V F +GS D+T R+W S D Y + H A+
Sbjct: 372 GSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLW--SFDRTYPLR-IYAGHLAD 428
Query: 313 VQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372
V V H + Y T S D T + G + + G G P S AF P+G L
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT--GHRG-P--VLSLAFSPNGKYL 483
Query: 373 GTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK 431
+ + +K+WD+ S + GH +T+++FS + +A+A+ D V++WD+R
Sbjct: 484 ASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTH 543
Query: 432 NFRSFESSDSE 442
+ S SE
Sbjct: 544 CSAPTDGSSSE 554
Score = 167 (63.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 51/192 (26%), Positives = 81/192 (42%)
Query: 209 RYTQLASHP---LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHS 265
RY L S L++ + +DI A+G D A L+ + +GH
Sbjct: 367 RYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHL 426
Query: 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYF 325
V VKF + TGS DKTVR+W ++ GN H V ++ KY
Sbjct: 427 ADVDCVKFHPNSNYLATGSTDKTVRLWS-AQQGN--SVRLFTGHRGPVLSLAFSPNGKYL 483
Query: 326 VTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWD 385
+A D +DL+SG ++ G + TS F PD ++ + + + V++WD
Sbjct: 484 ASAGEDQRLKLWDLASGTLFKELR-----GHTDNITSLTFSPDSSLIASASMDNSVRVWD 538
Query: 386 VKSQANVAKFDG 397
+++ A DG
Sbjct: 539 IRNTHCSAPTDG 550
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 58/226 (25%), Positives = 97/226 (42%)
Query: 306 LKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAF 365
L+ H V + A + ++ S D + ++DL S T G
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS---FTNT--VLYQGHAYPVWDVDI 392
Query: 366 HPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKL 424
P L +G+ + ++W + + GH+ V + F N YLAT + D V+L
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 425 WDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTF 482
W ++ + R F + P S+ F +G YLA A D ++++ +AS F
Sbjct: 453 WSAQQGNSVRLF--TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL-------F 503
Query: 483 PDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN--DAPSE 525
+L G T T + F PD+ IA SMD ++RV+ + AP++
Sbjct: 504 KELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTD 549
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 216 (81.1 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 63/211 (29%), Positives = 97/211 (45%)
Query: 244 DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303
DT A L+ + + GH+ V V F G F T S D+T R+W + +
Sbjct: 700 DTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTN---HISPL 756
Query: 304 HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSA 363
H ++ V H Y T S D + +++ +G C+ R YT
Sbjct: 757 RIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGH----RAPIYT-V 811
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GV 422
AF PDG +L T + V +WD+ + V K DGH V ++ FS +G LA+ + D V
Sbjct: 812 AFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTV 871
Query: 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453
+LWD++K +F SS S P++ ++ D S
Sbjct: 872 RLWDVKK-----AFNSSLSTQPSSLIN-DES 896
Score = 209 (78.6 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 73/231 (31%), Positives = 100/231 (43%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
T GHS V F + L+ S D T R+W N C K H V V+
Sbjct: 674 TFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVC---YKGHNFPVWDVSFS 730
Query: 320 ATNKYFVTASLDNT---WCFYDLSSGICLT-QVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
YF TAS D T W +S T +SD T FHP+ L TG
Sbjct: 731 PFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNT---------VRFHPNINYLATG 781
Query: 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFR 434
+++ ++W++++ V F GH + ++FS +G LATA D V LWDL K +
Sbjct: 782 SNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVK 841
Query: 435 SFESSDSETP-TNSVDFDHSGSYLAVASADIRVYQVASVKADWNC-IKTFP 483
D T S+DF GS LA S+D V ++ VK +N + T P
Sbjct: 842 KM---DGHTKCVYSLDFSCDGSILASGSSDCTV-RLWDVKKAFNSSLSTQP 888
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 43/157 (27%), Positives = 78/157 (49%)
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV- 422
+F PD L + + + ++W +++ +N+ + GH V +SFS G+Y ATA+HD
Sbjct: 686 SFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTA 745
Query: 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIK 480
+LW + R F S+ N+V F + +YLA S D R++++ + K C++
Sbjct: 746 RLWTTNHISPLRIFTGHLSDC--NTVRFHPNINYLATGSNDKSARLWEIQTGK----CVR 799
Query: 481 TFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
F + V F PD + +A D ++ ++ L
Sbjct: 800 IF--MGHRAPIYTVAFSPDGRLLATAGEDTSVILWDL 834
Score = 153 (58.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 44/153 (28%), Positives = 68/153 (44%)
Query: 239 ATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDG 298
AT D A L+ + +GH +V+F + TGS DK+ R+W+ + G
Sbjct: 737 ATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWE-IQTG 795
Query: 299 NYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPE 358
C H A + V + TA D + +DLS+G + ++ DG +
Sbjct: 796 K--CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKM-----DGHTK 848
Query: 359 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
S F DG IL +G+S+ V++WDVK N
Sbjct: 849 CVYSLDFSCDGSILASGSSDCTVRLWDVKKAFN 881
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 86/401 (21%), Positives = 155/401 (38%)
Query: 123 DEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELT 182
DE S+ QSE+ ST + +A PE ED +K + I LT
Sbjct: 417 DEQYSISFQSEKDAGDLNSTPINYHAF------KPEFEDDVLVQQKEKQQLEQGRILPLT 470
Query: 183 DCNAALSQQRKKRQVPPALAP-IDALERYT----QLASHPLHKT-SKPGIVSLDIHYSKD 236
D NA L PP + I L++ ++ + K S I +L + +
Sbjct: 471 DPNAPLPPVVAPPPPPPPTSGYIPKLKKKDKKKKEVKDERMSKIESNVPIPNLTERFENE 530
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ + PS T + + + + + + L G +D +V++W E
Sbjct: 531 LMEDFTKCVSLSSSHLPSICFYTIFNTY-QGLNTTDISKDAQLVAGGFSDSSVKIWNLKE 589
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
+ + + Q + N YF + + S+ + ++ +G +
Sbjct: 590 MKEQRLQQQQQQQQQQQQQQNSNQ-NGYFENGNFAS-------SASSASSAMNGSGNNNE 641
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
T+A + L +G+S + K+ + ++ F GH G V SFS + YL +
Sbjct: 642 NNKSTTANNN-----LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLS 696
Query: 417 AAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKAD 475
+ D +LW + + N ++ + P V F G Y A AS D R ++ +
Sbjct: 697 CSEDTTARLWSMETMSNLVCYKGHNF--PVWDVSFSPFGFYFATASHD-RTARLWTT--- 750
Query: 476 WNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 515
N I +G V+F P+ Y+A GS D++ R++
Sbjct: 751 -NHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLW 790
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+ +S D ++AT G DT+ +L+D +G+ V + GH+K V S+ F +G + +GS+D T
Sbjct: 811 VAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCT 870
Query: 289 VRVW 292
VR+W
Sbjct: 871 VRLW 874
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 206 (77.6 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 54/190 (28%), Positives = 86/190 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I T DT L+D +GQ TT +GH+ V S+ + LF++G+ D + ++W E
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIRE- 215
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G C+ T H +++ A+ F T S D T +DL + L S D
Sbjct: 216 GM--CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSH---DNII 270
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G TS AF G +L G + +WD GH V+ + +++G +AT
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 418 AHDG-VKLWD 426
+ D +K+W+
Sbjct: 331 SWDSFLKIWN 340
Score = 191 (72.3 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 68/289 (23%), Positives = 115/289 (39%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ VT+S D T +D+ +G T
Sbjct: 121 CSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTT 179
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
AG G S + PD + +G +A K+WD++ F GH + AI F
Sbjct: 180 F--AGHTG---DVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NG AT + D +L+DLR + + + SV F SG L D
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++KAD + D + +C+ D +A GS D L+++
Sbjct: 295 NVWDTLKADRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 170 (64.9 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 62/258 (24%), Positives = 107/258 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ Y LDN Y L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNYVACGGLDNICSIYSLKTREGNVRVSRE-LAGHT-GYLSCCRFLDDNQIV-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + + + A D KLWD+R+ ++F
Sbjct: 164 TTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFT 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N++ F +G+ A S D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAICFFPNGNAFATGSDDATC-RLFDLRADQELMVYSHDNIICG-ITSVAFS 279
Query: 498 PDAKYIAVGSMDRNLRVF 515
+ + G D N V+
Sbjct: 280 KSGRLLLAGYDDFNCNVW 297
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 48/190 (25%), Positives = 82/190 (43%)
Query: 200 ALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT 259
AL I+ ++ T A H T ++SL + + +G D +A L+D G
Sbjct: 167 ALWDIETGQQTTTFAGH----TGD--VMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQ 220
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
T +GH + ++ F G+ F TGS D T R++ D D + + H + +T
Sbjct: 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLF----DLRADQELMVYSHDNIICGITSV 276
Query: 320 ATNKY--FVTASLDNTWCFYDLSSGICLTQVSD-AGT-DGRPEGYTSAAFHPDGLILGTG 375
A +K + A D D + + T +D AG G + DG+ + TG
Sbjct: 277 AFSKSGRLLLAGYD------DFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 376 TSEALVKIWD 385
+ ++ +KIW+
Sbjct: 331 SWDSFLKIWN 340
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 212 (79.7 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 72/270 (26%), Positives = 124/270 (45%)
Query: 253 PSGQIVTTLSGHSKKVTSVK-FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
P QI SGH+K V++V+ F G L L+ S D +++W+ G C T H+
Sbjct: 277 PKKQI-HVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVY--GERRCLRTFIGHSK 333
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-- 369
V+ + + F++A+ D +D +G C+++ ++ R Y F+PD
Sbjct: 334 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN-----RKVPYC-VKFNPDEDK 387
Query: 370 -LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDL 427
+ G S+ + WD++S V ++D H+GAV I F EN +++T+ +++W+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 428 RKLKNFRSF-ESSDSETPTNSVDFDHSGSYLAVASADIRVYQV-ASVKADWNCIKTFPDL 485
+F+ E S P +V +G +LA S D ++ A + N K F
Sbjct: 448 DIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGH 505
Query: 486 SGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
G A V F PD Y+ G + L ++
Sbjct: 506 MVAGYACQVDFSPDMSYVISGDGNGKLNIW 535
Score = 158 (60.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 51/195 (26%), Positives = 82/195 (42%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294
+++ G D V +D SG+IV H V ++ FV E F++ S DK++RVW+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
D D K+ + + AVT+ K+ S+DN + + L +
Sbjct: 448 --DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKG 504
Query: 355 GRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGY 412
GY F PD + +G + IWD K+ ++F H + A+
Sbjct: 505 HMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETS 564
Query: 413 YLATAAHDG-VKLWD 426
+ T DG +KLWD
Sbjct: 565 KVITCGWDGLIKLWD 579
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 213 (80.0 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 72/270 (26%), Positives = 125/270 (46%)
Query: 253 PSGQIVTTLSGHSKKVTSVK-FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
P QI SGH+K V++V+ F G L L+ S D +++W+ G+ C T H+
Sbjct: 361 PKKQI-HVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVY--GDRRCLRTFIGHSK 417
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-- 369
V+ + + F++A+ D +D +G C+++ ++ R Y F+PD
Sbjct: 418 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN-----RKVPYC-VKFNPDEDK 471
Query: 370 -LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDL 427
+ G S+ + WD++S V ++D H+GAV I F EN +++T+ +++W+
Sbjct: 472 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 531
Query: 428 RKLKNFRSF-ESSDSETPTNSVDFDHSGSYLAVASADIRVYQV-ASVKADWNCIKTFPDL 485
+F+ E S P +V +G +LA S D ++ A + N K F
Sbjct: 532 DIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGH 589
Query: 486 SGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
G A V F PD Y+ G + L ++
Sbjct: 590 MVAGYACQVDFSPDMSYVISGDGNGKLNIW 619
Score = 158 (60.7 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 51/195 (26%), Positives = 82/195 (42%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294
+++ G D V +D SG+IV H V ++ FV E F++ S DK++RVW+
Sbjct: 472 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 531
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
D D K+ + + AVT+ K+ S+DN + + L +
Sbjct: 532 --DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKG 588
Query: 355 GRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGY 412
GY F PD + +G + IWD K+ ++F H + A+
Sbjct: 589 HMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETS 648
Query: 413 YLATAAHDG-VKLWD 426
+ T DG +KLWD
Sbjct: 649 KVITCGWDGLIKLWD 663
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 212 (79.7 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 66/224 (29%), Positives = 106/224 (47%)
Query: 255 GQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQ 314
G + L GH V S +F+ + L+ S D ++R W + G++ + H V
Sbjct: 328 GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW---DLGSFTNTVLYQGHAYPVW 384
Query: 315 AVTVHATNKYFVTASLDNT---WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+ + + YF +AS D T W F D + + + A D FHP+
Sbjct: 385 DLDISPHSLYFASASHDRTARLWSF-DRTYPLRIYAGHLADVD-------CVKFHPNSNY 436
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKL 430
L TG+++ V++W + +V F GH G V +++FS NG YLA+A D +KLWDL
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 496
Query: 431 KNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471
++ +D+ T S+ F S +A AS D +RV+ + S
Sbjct: 497 TLYKELRGHTDNIT---SLTFSPDSSLVASASMDNSVRVWDIRS 537
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 53/191 (27%), Positives = 84/191 (43%)
Query: 255 GQIVTTL--SGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAE 312
G T+ GH+ V + F + S D+T R+W S D Y + H A+
Sbjct: 368 GSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLW--SFDRTYPLR-IYAGHLAD 424
Query: 313 VQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372
V V H + Y T S D T + G + + G G P S AF P+G L
Sbjct: 425 VDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFT--GHRG-P--VLSLAFSPNGKYL 479
Query: 373 GTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK 431
+ + +K+WD+ S + GH +T+++FS + +A+A+ D V++WD+R
Sbjct: 480 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSH 539
Query: 432 NFRSFESSDSE 442
+ S SE
Sbjct: 540 CSTPADGSSSE 550
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/192 (26%), Positives = 79/192 (41%)
Query: 209 RYTQLASHP---LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHS 265
RY L S L++ + LDI A+ D A L+ + +GH
Sbjct: 363 RYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHL 422
Query: 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYF 325
V VKF + TGS DKTVR+W ++ GN H V ++ KY
Sbjct: 423 ADVDCVKFHPNSNYLATGSTDKTVRLWS-TQQGN--SVRLFTGHRGPVLSLAFSPNGKYL 479
Query: 326 VTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWD 385
+A D +DL+SG ++ G + TS F PD ++ + + + V++WD
Sbjct: 480 ASAGEDQRLKLWDLASGTLYKELR-----GHTDNITSLTFSPDSSLVASASMDNSVRVWD 534
Query: 386 VKSQANVAKFDG 397
++S DG
Sbjct: 535 IRSSHCSTPADG 546
Score = 157 (60.3 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 56/230 (24%), Positives = 97/230 (42%)
Query: 293 QGSEDGNYDCK-HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
+ ED N + L+ H V + A + ++ S D + ++DL S T
Sbjct: 320 EDDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS---FTNT--V 374
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411
G P L + + + ++W + + GH+ V + F N
Sbjct: 375 LYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 434
Query: 412 YYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQ 468
YLAT + D V+LW ++ + R F + P S+ F +G YLA A D ++++
Sbjct: 435 NYLATGSTDKTVRLWSTQQGNSVRLF--TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 492
Query: 469 VASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+AS + +L G T T + F PD+ +A SMD ++RV+ +
Sbjct: 493 LASGTL-------YKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDI 535
Score = 130 (50.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 36/153 (23%), Positives = 65/153 (42%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
H + + +ATG D L+ G V +GH V S+ F G + D+ +++
Sbjct: 431 HPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKL 490
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
W + Y L+ HT + ++T + +AS+DN+ +D+ S C T +
Sbjct: 491 WDLASGTLYK---ELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGS 547
Query: 352 GTD------GRPEGYTSAAFHPDGLILGTGTSE 378
++ G+ S F L+L TG ++
Sbjct: 548 SSELVGVYTGQMSNVLSVQFMACNLLLVTGITQ 580
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 216 (81.1 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 62/218 (28%), Positives = 112/218 (51%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+H + + +G D ++D +GQ + L GH V V++ +G ++G+ D V+
Sbjct: 347 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 404
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW + C HTL+ HT V ++ + V+ SLD + +D+ +G C+ ++
Sbjct: 405 VWDPETE---TCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVETGNCIHTLT- 458
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG---HVGAVTAISF 407
G + TS D +++ +G +++ VKIWD+K+ + G H AVT + F
Sbjct: 459 ----GH-QSLTSGMELKDNILV-SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 512
Query: 408 SENGYYLATAAHDG-VKLWDLRK---LKNFRSFESSDS 441
++N ++ T++ DG VKLWDL+ ++N + ES S
Sbjct: 513 NKN--FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 548
Score = 210 (79.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 75/319 (23%), Positives = 148/319 (46%)
Query: 204 IDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG 263
ID R +L S + K +++ + + + I +G D ++ +G+ + TL G
Sbjct: 241 IDTNWRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 299
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H+ V S + ++ ++GS D+T++VW +E G +C HTL HT+ V+ + +H K
Sbjct: 300 HTGGVWSSQM--RDNIIISGSTDRTLKVWN-AETG--ECIHTLYGHTSTVRCMHLH--EK 352
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
V+ S D T +D+ +G CL + G + DG + +G + +VK+
Sbjct: 353 RVVSGSRDATLRVWDIETGQCLHVLM-----GHVAAVRCVQY--DGRRVVSGAYDFMVKV 405
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSE 442
WD +++ + GH V ++ F +G ++ + + D +++WD+ + S
Sbjct: 406 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 463
Query: 443 TPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK----ATCVKFGP 498
T + + L +AD V ++ +K C++T L G K TC++F
Sbjct: 464 TS----GMELKDNILVSGNADSTV-KIWDIKTG-QCLQT---LQGPNKHQSAVTCLQFNK 514
Query: 499 DAKYIAVGSMDRNLRVFGL 517
+ ++ S D ++++ L
Sbjct: 515 N--FVITSSDDGTVKLWDL 531
Score = 165 (63.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 51/198 (25%), Positives = 92/198 (46%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+ Y + +G D ++D + + TL GH+ +V S++F +G ++GS D ++R
Sbjct: 387 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 444
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW E GN C HTL H + + + + V+ + D+T +D+ +G CL +
Sbjct: 445 VWD-VETGN--CIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQ- 498
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA---NVAKFD--GHVGAVTAI 405
G + T F+ + +I T + + VK+WD+K+ N+ + G G V I
Sbjct: 499 -GPNKHQSAVTCLQFNKNFVI--TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 555
Query: 406 SFSENGYYLATAAHDGVK 423
S A + +G +
Sbjct: 556 RASNTKLVCAVGSRNGTE 573
Score = 40 (19.1 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 27 LIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKP 61
L E ++L KC G +D+ + IK K++KP
Sbjct: 194 LAEDNLLWREKCKEEG----IDEPLHIKRRKVIKP 224
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 216 (81.1 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 62/218 (28%), Positives = 112/218 (51%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+H + + +G D ++D +GQ + L GH V V++ +G ++G+ D V+
Sbjct: 389 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 446
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW + C HTL+ HT V ++ + V+ SLD + +D+ +G C+ ++
Sbjct: 447 VWDPETE---TCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVETGNCIHTLT- 500
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG---HVGAVTAISF 407
G + TS D +++ +G +++ VKIWD+K+ + G H AVT + F
Sbjct: 501 ----GH-QSLTSGMELKDNILV-SGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQF 554
Query: 408 SENGYYLATAAHDG-VKLWDLRK---LKNFRSFESSDS 441
++N ++ T++ DG VKLWDL+ ++N + ES S
Sbjct: 555 NKN--FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 590
Score = 212 (79.7 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 74/316 (23%), Positives = 147/316 (46%)
Query: 204 IDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG 263
ID R +L S + K +++ + + + I +G D ++ +G+ + TL G
Sbjct: 283 IDTNWRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 341
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H+ V S + ++ ++GS D+T++VW +E G +C HTL HT+ V+ + +H K
Sbjct: 342 HTGGVWSSQM--RDNIIISGSTDRTLKVWN-AETG--ECIHTLYGHTSTVRCMHLH--EK 394
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
V+ S D T +D+ +G CL + G + DG + +G + +VK+
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLM-----GHVAAVRCVQY--DGRRVVSGAYDFMVKV 447
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSE 442
WD +++ + GH V ++ F +G ++ + + D +++WD+ + S
Sbjct: 448 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 505
Query: 443 TPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKA-TCVKFGPDAK 501
T + + L +AD V ++ +K C++T S A TC++F +
Sbjct: 506 TS----GMELKDNILVSGNADSTV-KIWDIKTG-QCLQTLQGPSKHQSAVTCLQFNKN-- 557
Query: 502 YIAVGSMDRNLRVFGL 517
++ S D ++++ L
Sbjct: 558 FVITSSDDGTVKLWDL 573
Score = 164 (62.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 51/198 (25%), Positives = 91/198 (45%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+ Y + +G D ++D + + TL GH+ +V S++F +G ++GS D ++R
Sbjct: 429 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 486
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW E GN C HTL H + + + + V+ + D+T +D+ +G CL +
Sbjct: 487 VWD-VETGN--CIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQ- 540
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA---NVAKFD--GHVGAVTAI 405
G T F+ + +I T + + VK+WD+K+ N+ + G G V I
Sbjct: 541 -GPSKHQSAVTCLQFNKNFVI--TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 597
Query: 406 SFSENGYYLATAAHDGVK 423
S A + +G +
Sbjct: 598 RASNTKLVCAVGSRNGTE 615
Score = 41 (19.5 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 27 LIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKP 61
L E ++L KC G +D+ + IK KI+KP
Sbjct: 236 LAEDNLLWREKCKEEG----IDEPLHIKRRKIIKP 266
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 213 (80.0 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 101/405 (24%), Positives = 173/405 (42%)
Query: 140 ESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPP 199
E+T + S A + + E E+ K TG A A T + +++ P
Sbjct: 221 ETTTLPSVKAPESTLKETEPEN-NNTSKINDTG--SATTATTTTATETEIKPKEEDATPA 277
Query: 200 ALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDT----NAVLFDRPSG 255
+L L Y Q A+H K P ++ LD D + D N L
Sbjct: 278 SLHQDHYLVPYNQRANHS--KPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDV 335
Query: 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK----HTLKDHTA 311
++ +L H+ V VKF +G+ TG +KT +V++ S DG+ + +H
Sbjct: 336 ELHKSLD-HTSVVCCVKFSNDGEYLATG-CNKTTQVYRVS-DGSLVARLSDDSAANNHRN 392
Query: 312 EV-QAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ-VSDAGTDGRPEG--YT-SAAFH 366
+ + T +T+ +T + T ++S L + V + T P Y S F
Sbjct: 393 SITENNTTTSTDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFS 452
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLW 425
PDG L TG + L++IWD++++ V GH + ++ + +G L + + D V++W
Sbjct: 453 PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIW 512
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDL 485
DLR + + D T T +V G Y+A S D R +V + + + +
Sbjct: 513 DLRTGQCSLTLSIEDGVT-TVAVS-PGDGKYIAAGSLD-RAVRVWDSETGFLVERLDSEN 569
Query: 486 -SGTG---KATCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSES 526
SGTG V F D + + GS+DR+++++ L + S+S
Sbjct: 570 ESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 614
Score = 189 (71.6 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 59/229 (25%), Positives = 109/229 (47%)
Query: 218 LHKTSKPG--IVSLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKF 273
L+ +S P + + +S D +ATG D ++D + +IV L GH + + S+ +
Sbjct: 434 LNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY 493
Query: 274 VTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT 333
GD ++GS D+TVR+W G +++D V AV+ KY SLD
Sbjct: 494 FPSGDKLVSGSGDRTVRIWD-LRTGQCSLTLSIEDGVTTV-AVSP-GDGKYIAAGSLDRA 550
Query: 334 WCFYDLSSGICLTQV---SDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
+D +G + ++ +++GT G + S F DG + +G+ + VK+W++++
Sbjct: 551 VRVWDSETGFLVERLDSENESGT-GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 609
Query: 391 NVAK------------FDGHVGAVTAISFSENGYYLATAAHD-GVKLWD 426
N + + GH V +++ ++N Y+ + + D GV WD
Sbjct: 610 NKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD 658
Score = 171 (65.3 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/219 (26%), Positives = 101/219 (46%)
Query: 268 VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVT 327
+ SV F +G TG+ D+ +R+W + N L+ H ++ ++ + V+
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIW---DIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 502
Query: 328 ASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP-DGLILGTGTSEALVKIWDV 386
S D T +DL +G C +S +G T+ A P DG + G+ + V++WD
Sbjct: 503 GSGDRTVRIWDLRTGQCSLTLSIE------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDS 556
Query: 387 KSQANVAKFD-------GHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFES 438
++ V + D GH +V ++ F+ +G + + + D VKLW+L+ N
Sbjct: 557 ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN-----K 611
Query: 439 SDSETP---TNSVDF-DHSGSYLAVASADIRVYQVASVK 473
SDS+TP T V + H L+VA+ Y ++ K
Sbjct: 612 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK 650
Score = 120 (47.3 bits), Expect = 0.00085, P = 0.00085
Identities = 57/225 (25%), Positives = 95/225 (42%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
I SLD S D + +G D ++D +GQ TLS T +G GS
Sbjct: 488 IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 547
Query: 286 DKTVRVWQGSEDG----NYDCKHTL-KDHTAEVQAVTVHATNKYFVTASLDNTWCFYDL- 339
D+ VRVW SE G D ++ H V +V + V+ SLD + ++L
Sbjct: 548 DRAVRVWD-SETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 606
Query: 340 -SSGICLTQVSDAGTD-----GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVA 393
++ ++ ++GT G + S A + + +G+ + V WD KS +
Sbjct: 607 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 666
Query: 394 KFDGHVGAVTAISFSENGYYL-------ATAAHD-GVKLWDLRKL 430
GH +V +++ + NG L AT + D ++W +K+
Sbjct: 667 MLQGHRNSVISVAVA-NGSPLGPEYNVFATGSGDCKARIWKYKKI 710
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 219 (82.2 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 63/218 (28%), Positives = 112/218 (51%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+H + + +G D ++D +GQ + L GH V V++ +G ++G+ D V+
Sbjct: 520 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 577
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW + C HTL+ HT V ++ + V+ SLD + +D+ +G C+ ++
Sbjct: 578 VWDPETE---TCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVETGNCIHTLT- 631
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG---HVGAVTAISF 407
G + TS D +++ +G +++ VKIWD+K+ + G H AVT + F
Sbjct: 632 ----GH-QSLTSGMELKDNILV-SGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQF 685
Query: 408 SENGYYLATAAHDG-VKLWDLRK---LKNFRSFESSDS 441
++N ++ T++ DG VKLWDLR ++N + ES S
Sbjct: 686 NKN--FVITSSDDGTVKLWDLRTGEFIRNLVTLESGGS 721
Score = 206 (77.6 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 75/319 (23%), Positives = 147/319 (46%)
Query: 204 IDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG 263
ID R L S + K +++ + + + I +G D ++ +G+ + TL G
Sbjct: 414 IDTNWRRGDLKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 472
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H+ V S + ++ ++GS D+T++VW +E G +C HTL HT+ V+ + +H K
Sbjct: 473 HTGGVWSSQM--RDNIIISGSTDRTLKVWN-AETG--ECIHTLYGHTSTVRCMHLH--EK 525
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
V+ S D T +D+ +G CL + G + DG + +G + +VK+
Sbjct: 526 RVVSGSRDATLRVWDIETGQCLHVLM-----GHVAAVRCVQY--DGRRVVSGAYDFMVKV 578
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSE 442
WD +++ + GH V ++ F +G ++ + + D +++WD+ + S
Sbjct: 579 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 636
Query: 443 TPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK----ATCVKFGP 498
T + + L +AD V ++ +K C++T L G K TC++F
Sbjct: 637 TS----GMELKDNILVSGNADSTV-KIWDIKTG-QCLQT---LQGPHKHQSAVTCLQFNK 687
Query: 499 DAKYIAVGSMDRNLRVFGL 517
+ ++ S D ++++ L
Sbjct: 688 N--FVITSSDDGTVKLWDL 704
Score = 40 (19.1 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 27 LIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKP 61
L E ++L KC G +D+ + IK K++KP
Sbjct: 367 LAEDNLLWKEKCKEEG----IDEPLHIKRRKVIKP 397
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 205 (77.2 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 53/190 (27%), Positives = 86/190 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I T DT L+D +GQ TT +GH+ V S+ + LF++G+ D + ++W E
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G C+ T H +++ A+ F T S D T +DL + L S D
Sbjct: 216 GM--CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH---DNII 270
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G TS +F G +L G + +WD GH V+ + +++G +AT
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 418 AHDG-VKLWD 426
+ D +K+W+
Sbjct: 331 SWDSFLKIWN 340
Score = 196 (74.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 68/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ VT+S D T +D+ +G Q
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG----Q 175
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
+ T G S + PD + +G +A K+WDV+ F GH + AI F
Sbjct: 176 QTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NG AT + D +L+DLR + ++ + SV F SG L D
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++KAD + D + +C+ D +A GS D L+++
Sbjct: 295 NVWDALKADRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 173 (66.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 62/258 (24%), Positives = 108/258 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ Y LDN Y+L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRE-LAGHT-GYLSCCRFLDDNQIV-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + + + A D KLWD+R+ ++F
Sbjct: 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N++ F +G+ A S D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAICFFPNGNAFATGSDDATC-RLFDLRADQELMTYSHDNIICG-ITSVSFS 279
Query: 498 PDAKYIAVGSMDRNLRVF 515
+ + G D N V+
Sbjct: 280 KSGRLLLAGYDDFNCNVW 297
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 205 (77.2 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 53/190 (27%), Positives = 86/190 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I T DT L+D +GQ TT +GH+ V S+ + LF++G+ D + ++W E
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G C+ T H +++ A+ F T S D T +DL + L S D
Sbjct: 216 GM--CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH---DNII 270
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G TS +F G +L G + +WD GH V+ + +++G +AT
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 418 AHDG-VKLWD 426
+ D +K+W+
Sbjct: 331 SWDSFLKIWN 340
Score = 196 (74.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 68/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ VT+S D T +D+ +G Q
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG----Q 175
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
+ T G S + PD + +G +A K+WDV+ F GH + AI F
Sbjct: 176 QTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NG AT + D +L+DLR + ++ + SV F SG L D
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++KAD + D + +C+ D +A GS D L+++
Sbjct: 295 NVWDALKADRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 173 (66.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 62/258 (24%), Positives = 108/258 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ Y LDN Y+L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRE-LAGHT-GYLSCCRFLDDNQIV-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + + + A D KLWD+R+ ++F
Sbjct: 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N++ F +G+ A S D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAICFFPNGNAFATGSDDATC-RLFDLRADQELMTYSHDNIICG-ITSVSFS 279
Query: 498 PDAKYIAVGSMDRNLRVF 515
+ + G D N V+
Sbjct: 280 KSGRLLLAGYDDFNCNVW 297
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 205 (77.2 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 53/190 (27%), Positives = 86/190 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I T DT L+D +GQ TT +GH+ V S+ + LF++G+ D + ++W E
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G C+ T H +++ A+ F T S D T +DL + L S D
Sbjct: 216 GM--CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH---DNII 270
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G TS +F G +L G + +WD GH V+ + +++G +AT
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 418 AHDG-VKLWD 426
+ D +K+W+
Sbjct: 331 SWDSFLKIWN 340
Score = 196 (74.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 68/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ VT+S D T +D+ +G Q
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG----Q 175
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
+ T G S + PD + +G +A K+WDV+ F GH + AI F
Sbjct: 176 QTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NG AT + D +L+DLR + ++ + SV F SG L D
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++KAD + D + +C+ D +A GS D L+++
Sbjct: 295 NVWDALKADRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 173 (66.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 62/258 (24%), Positives = 108/258 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ Y LDN Y+L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRE-LAGHT-GYLSCCRFLDDNQIV-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + + + A D KLWD+R+ ++F
Sbjct: 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N++ F +G+ A S D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAICFFPNGNAFATGSDDATC-RLFDLRADQELMTYSHDNIICG-ITSVSFS 279
Query: 498 PDAKYIAVGSMDRNLRVF 515
+ + G D N V+
Sbjct: 280 KSGRLLLAGYDDFNCNVW 297
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 205 (77.2 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 53/190 (27%), Positives = 86/190 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I T DT L+D +GQ TT +GH+ V S+ + LF++G+ D + ++W E
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G C+ T H +++ A+ F T S D T +DL + L S D
Sbjct: 216 GM--CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH---DNII 270
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G TS +F G +L G + +WD GH V+ + +++G +AT
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 418 AHDG-VKLWD 426
+ D +K+W+
Sbjct: 331 SWDSFLKIWN 340
Score = 196 (74.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 68/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ VT+S D T +D+ +G Q
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG----Q 175
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
+ T G S + PD + +G +A K+WDV+ F GH + AI F
Sbjct: 176 QTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NG AT + D +L+DLR + ++ + SV F SG L D
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++KAD + D + +C+ D +A GS D L+++
Sbjct: 295 NVWDALKADRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 173 (66.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 62/258 (24%), Positives = 108/258 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ Y LDN Y+L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRE-LAGHT-GYLSCCRFLDDNQIV-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + + + A D KLWD+R+ ++F
Sbjct: 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N++ F +G+ A S D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAICFFPNGNAFATGSDDATC-RLFDLRADQELMTYSHDNIICG-ITSVSFS 279
Query: 498 PDAKYIAVGSMDRNLRVF 515
+ + G D N V+
Sbjct: 280 KSGRLLLAGYDDFNCNVW 297
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 205 (77.2 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 53/190 (27%), Positives = 86/190 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I T DT L+D +GQ TT +GH+ V S+ + LF++G+ D + ++W E
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE- 215
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G C+ T H +++ A+ F T S D T +DL + L S D
Sbjct: 216 GM--CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH---DNII 270
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G TS +F G +L G + +WD GH V+ + +++G +AT
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 418 AHDG-VKLWD 426
+ D +K+W+
Sbjct: 331 SWDSFLKIWN 340
Score = 196 (74.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 68/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ VT+S D T +D+ +G Q
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG----Q 175
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
+ T G S + PD + +G +A K+WDV+ F GH + AI F
Sbjct: 176 QTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NG AT + D +L+DLR + ++ + SV F SG L D
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++KAD + D + +C+ D +A GS D L+++
Sbjct: 295 NVWDALKADRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 173 (66.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 62/258 (24%), Positives = 108/258 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ Y LDN Y+L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRE-LAGHT-GYLSCCRFLDDNQIV-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + + + A D KLWD+R+ ++F
Sbjct: 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N++ F +G+ A S D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAICFFPNGNAFATGSDDATC-RLFDLRADQELMTYSHDNIICG-ITSVSFS 279
Query: 498 PDAKYIAVGSMDRNLRVF 515
+ + G D N V+
Sbjct: 280 KSGRLLLAGYDDFNCNVW 297
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 211 (79.3 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 60/209 (28%), Positives = 101/209 (48%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHS--KK----VTSVKFVTEGDLFLT 282
+ +S+D +ATG + +A +FD GQ V L S K + SV F +G T
Sbjct: 275 VRFSRDGKYLATG-CNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLAT 333
Query: 283 GSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG 342
G+ DK +RVW + KH H ++ ++ +Y + S D T +D++ G
Sbjct: 334 GAEDKQIRVW---DIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEG 390
Query: 343 ICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKF---DGHV 399
+ +S +G T+ A PDGL + G+ + V++WD + V + DGH
Sbjct: 391 KLVYTLSIE------DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHK 444
Query: 400 GAVTAISFSENGYYLATAAHDG-VKLWDL 427
+V +++F+ NG L + + D +KLW+L
Sbjct: 445 DSVYSVAFAPNGKELVSGSLDKTIKLWEL 473
Score = 204 (76.9 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 63/240 (26%), Positives = 110/240 (45%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+ATG D ++D + I SGH + + S+ F G +GS DKTVR+W +E
Sbjct: 331 LATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAE- 389
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G +++D V V + Y SLD T +D ++G + ++ + DG
Sbjct: 390 GKLVYTLSIEDG---VTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENP--DGHK 444
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDV---KSQANVA--------KFDGHVGAVTAIS 406
+ S AF P+G L +G+ + +K+W++ + Q N A F+GH V ++
Sbjct: 445 DSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVC 504
Query: 407 FSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIR 465
+ +G+++ + + D GV+ WD + + SV +G+ A S D+R
Sbjct: 505 LTPDGHWVMSGSKDRGVQFWD--PITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMR 562
Score = 187 (70.9 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 54/212 (25%), Positives = 96/212 (45%)
Query: 309 HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYT-SAAFHP 367
H + V V KY T + F D++ G + + D D + Y S F P
Sbjct: 268 HDSVVCCVRFSRDGKYLATGCNRSAQIF-DVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 368 DGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWD 426
DG L TG + +++WD+ ++ F GH + ++ F+ NG Y+A+ + D V+LWD
Sbjct: 327 DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWD 386
Query: 427 LRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLS 486
+ + K + D T +V G Y+A S D + +V + ++ +
Sbjct: 387 IAEGKLVYTLSIEDGVT---TVAMSPDGLYVAAGSLD-KTVRVWDTTTGY-LVERLENPD 441
Query: 487 GTGKAT-CVKFGPDAKYIAVGSMDRNLRVFGL 517
G + V F P+ K + GS+D+ ++++ L
Sbjct: 442 GHKDSVYSVAFAPNGKELVSGSLDKTIKLWEL 473
Score = 173 (66.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 62/210 (29%), Positives = 94/210 (44%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
I SLD + IA+G D L+D G++V TLS VT+V +G GS
Sbjct: 361 IYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTTVAMSPDGLYVAAGSL 419
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
DKTVRVW + + H V +V K V+ SLD T ++L+ +
Sbjct: 420 DKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELN--LPR 477
Query: 346 TQVSDAGTDGRP----EGYT----SAAFHPDGLILGTGTSEALVKIWD-VKSQANVAKFD 396
Q + AG G+ EG+ S PDG + +G+ + V+ WD + A +
Sbjct: 478 QQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMM-LQ 536
Query: 397 GHVGAVTAISFSENGYYLATAAHD-GVKLW 425
GH +V +++ S G AT + D ++W
Sbjct: 537 GHKNSVISVAPSPTGNLFATGSGDMRARIW 566
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 211 (79.3 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 72/270 (26%), Positives = 124/270 (45%)
Query: 253 PSGQIVTTLSGHSKKVTSVK-FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
P QI SGH+K V++V+ F G + L+ S D +++W+ G+ C T H
Sbjct: 278 PKKQI-HVWSGHTKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVY--GDRRCLRTFIGHGK 334
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG-- 369
V+ + + F++A+ D +D +G C+++ ++ R Y F+PD
Sbjct: 335 AVRDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTN-----RKVPYC-VKFNPDEDK 388
Query: 370 -LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDL 427
+ G S+ + WD++S V ++D H+GAV I F EN +++T+ +++W+
Sbjct: 389 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 448
Query: 428 RKLKNFRSF-ESSDSETPTNSVDFDHSGSYLAVASADIRVYQV-ASVKADWNCIKTFPDL 485
+F+ E S P +V +G +LA S D ++ A + N K F
Sbjct: 449 DIPVDFKYIAEPSMHSMP--AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGH 506
Query: 486 SGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
G A V F PD Y+ G D L ++
Sbjct: 507 MVAGYACQVDFSPDMSYVISGDADGKLNIW 536
Score = 155 (59.6 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 50/195 (25%), Positives = 83/195 (42%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQG 294
+++ G D V +D SG+IV H V ++ FV E F++ S DK++RVW+
Sbjct: 389 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 448
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
D D K+ + + AVT+ K+ S+DN + + L +
Sbjct: 449 --DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK-KKIFKG 505
Query: 355 GRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGY 412
GY F PD + +G ++ + IWD K+ ++ H + A+
Sbjct: 506 HMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHETS 565
Query: 413 YLATAAHDG-VKLWD 426
+ T DG +KLWD
Sbjct: 566 KVITCGWDGLIKLWD 580
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 214 (80.4 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 66/255 (25%), Positives = 118/255 (46%)
Query: 267 KVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKY-- 324
K+ F + L + G + R+++ ED ++ +L V V ++ T ++
Sbjct: 256 KLKCACFHPQSKLLVVGFTNGEFRLYE-IED--FNLIQSLSMGQNAVNTVNINKTGEWLA 312
Query: 325 FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
F +A L + S L Q G + + + PDG L TG+ + +KIW
Sbjct: 313 FGSAKLGQLLVYEWQSESYILKQ------QGHFDSMNTLCYSPDGSRLVTGSDDGKIKIW 366
Query: 385 DVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSET 443
DV+S + F H AVT + F++ G L +++ DG ++ WDL + +NF++F ++ S
Sbjct: 367 DVRSGFCLMTFTEHTSAVTQVQFAKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTAT-SRV 425
Query: 444 PTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKY 502
N + D SG + S D V SV+ + L+G G +C+ FG +
Sbjct: 426 QFNCLAVDPSGEVIVGGSQDTFEIYVWSVQTG----QLLDSLTGHEGPISCLTFGKENSI 481
Query: 503 IAVGSMDRNLRVFGL 517
+A S D+ +R++ +
Sbjct: 482 LASASWDKTIRIWNI 496
Score = 150 (57.9 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 50/251 (19%), Positives = 112/251 (44%)
Query: 228 SLDIHYSKDVIATGGVDTNAVL-FDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+++I+ + + +A G +L ++ S + GH + ++ + +G +TGS D
Sbjct: 301 TVNINKTGEWLAFGSAKLGQLLVYEWQSESYILKQQGHFDSMNTLCYSPDGSRLVTGSDD 360
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT 346
+++W G C T +HT+ V V + ++SLD T +DL I
Sbjct: 361 GKIKIWD-VRSGF--CLMTFTEHTSAVTQVQFAKRGQVLFSSSLDGTIRAWDL---IRFR 414
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDVKSQANVAKFDGHVGAVTAI 405
R + + A P G ++ G+ + + +W V++ + GH G ++ +
Sbjct: 415 NFKTFTATSRVQ-FNCLAVDPSGEVIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCL 473
Query: 406 SFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD- 463
+F + LA+A+ D +++W++ +N ++ E + ++ + LAV++ D
Sbjct: 474 TFGKENSILASASWDKTIRIWNIFS-RN-QTVEPIEIQSDALCLTMRPDCKELAVSTLDG 531
Query: 464 -IRVYQVASVK 473
+ ++ + K
Sbjct: 532 HVTIFDIEDAK 542
Score = 132 (51.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 70/309 (22%), Positives = 129/309 (41%)
Query: 229 LDIHYSKD---VIATGGVDTNAVLFDRPSGQ--IVTTLSGHSKKVTSVKFVTEGDLFLTG 283
L+I +S D I+T D A +F S + + T SGH V + F + ++ T
Sbjct: 150 LNISWSLDSRFFISTSK-DMTAKIFSLNSDEKDVAMTFSGHRDYVINAFFSHDQEIIYTV 208
Query: 284 SADKTVRVWQGSE---DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
S D + W+ +E N D + D T + + + A N ++ L CF+ S
Sbjct: 209 SKDGALFKWEYTERPKPENED-SDSEDDATDKPMSWRITAKNFFYADGKLKCA-CFHPQS 266
Query: 341 S----GIC-----LTQVSDAG-----TDGRPEGYTSAAFHPDGLILGTGTSE-ALVKIWD 385
G L ++ D + G+ + + G L G+++ + +++
Sbjct: 267 KLLVVGFTNGEFRLYEIEDFNLIQSLSMGQ-NAVNTVNINKTGEWLAFGSAKLGQLLVYE 325
Query: 386 VKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETP 444
+S++ + K GH ++ + +S +G L T + DG +K+WD+R F ++ +
Sbjct: 326 WQSESYILKQQGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRS--GFCLMTFTEHTSA 383
Query: 445 TNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIK--TFPDLSGTGKA--TCVKFGPDA 500
V F G L +S D +++A W+ I+ F + T + C+ P
Sbjct: 384 VTQVQFAKRGQVLFSSSLD------GTIRA-WDLIRFRNFKTFTATSRVQFNCLAVDPSG 436
Query: 501 KYIAVGSMD 509
+ I GS D
Sbjct: 437 EVIVGGSQD 445
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 61/293 (20%), Positives = 115/293 (39%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA---DKT 288
H ++ G + L++ ++ +LS V +V G+ GSA
Sbjct: 263 HPQSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVNTVNINKTGEWLAFGSAKLGQLL 322
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
V WQ SE +Y K + H + + VT S D +D+ SG CL
Sbjct: 323 VYEWQ-SE--SYILKQ--QGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTF 377
Query: 349 SDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISF 407
++ T F G +L + + + ++ WD+ N F ++
Sbjct: 378 TE-----HTSAVTQVQFAKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNCLAV 432
Query: 408 SENGYYLATAAHDGVKLWDLRKLKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD--I 464
+G + + D +++ + ++ + +S + E P + + F S LA AS D I
Sbjct: 433 DPSGEVIVGGSQDTFEIY-VWSVQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTI 491
Query: 465 RVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
R++ + S +T + A C+ PD K +AV ++D ++ +F +
Sbjct: 492 RIWNIFSRN------QTVEPIEIQSDALCLTMRPDCKELAVSTLDGHVTIFDI 538
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 214 (80.4 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 66/255 (25%), Positives = 118/255 (46%)
Query: 267 KVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKY-- 324
K+ F + L + G + R+++ ED ++ +L V V ++ T ++
Sbjct: 256 KLKCACFHPQSKLLVVGFTNGEFRLYE-IED--FNLIQSLSMGQNAVNTVNINKTGEWLA 312
Query: 325 FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
F +A L + S L Q G + + + PDG L TG+ + +KIW
Sbjct: 313 FGSAKLGQLLVYEWQSESYILKQ------QGHFDSMNTLCYSPDGSRLVTGSDDGKIKIW 366
Query: 385 DVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSET 443
DV+S + F H AVT + F++ G L +++ DG ++ WDL + +NF++F ++ S
Sbjct: 367 DVRSGFCLMTFTEHTSAVTQVQFAKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTAT-SRV 425
Query: 444 PTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKY 502
N + D SG + S D V SV+ + L+G G +C+ FG +
Sbjct: 426 QFNCLAVDPSGEVIVGGSQDTFEIYVWSVQTG----QLLDSLTGHEGPISCLTFGKENSI 481
Query: 503 IAVGSMDRNLRVFGL 517
+A S D+ +R++ +
Sbjct: 482 LASASWDKTIRIWNI 496
Score = 150 (57.9 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 50/251 (19%), Positives = 112/251 (44%)
Query: 228 SLDIHYSKDVIATGGVDTNAVL-FDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+++I+ + + +A G +L ++ S + GH + ++ + +G +TGS D
Sbjct: 301 TVNINKTGEWLAFGSAKLGQLLVYEWQSESYILKQQGHFDSMNTLCYSPDGSRLVTGSDD 360
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT 346
+++W G C T +HT+ V V + ++SLD T +DL I
Sbjct: 361 GKIKIWD-VRSGF--CLMTFTEHTSAVTQVQFAKRGQVLFSSSLDGTIRAWDL---IRFR 414
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDVKSQANVAKFDGHVGAVTAI 405
R + + A P G ++ G+ + + +W V++ + GH G ++ +
Sbjct: 415 NFKTFTATSRVQ-FNCLAVDPSGEVIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCL 473
Query: 406 SFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD- 463
+F + LA+A+ D +++W++ +N ++ E + ++ + LAV++ D
Sbjct: 474 TFGKENSILASASWDKTIRIWNIFS-RN-QTVEPIEIQSDALCLTMRPDCKELAVSTLDG 531
Query: 464 -IRVYQVASVK 473
+ ++ + K
Sbjct: 532 HVTIFDIEDAK 542
Score = 132 (51.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 70/309 (22%), Positives = 129/309 (41%)
Query: 229 LDIHYSKD---VIATGGVDTNAVLFDRPSGQ--IVTTLSGHSKKVTSVKFVTEGDLFLTG 283
L+I +S D I+T D A +F S + + T SGH V + F + ++ T
Sbjct: 150 LNISWSLDSRFFISTSK-DMTAKIFSLNSDEKDVAMTFSGHRDYVINAFFSHDQEIIYTV 208
Query: 284 SADKTVRVWQGSE---DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
S D + W+ +E N D + D T + + + A N ++ L CF+ S
Sbjct: 209 SKDGALFKWEYTERPKPENED-SDSEDDATDKPMSWRITAKNFFYADGKLKCA-CFHPQS 266
Query: 341 S----GIC-----LTQVSDAG-----TDGRPEGYTSAAFHPDGLILGTGTSE-ALVKIWD 385
G L ++ D + G+ + + G L G+++ + +++
Sbjct: 267 KLLVVGFTNGEFRLYEIEDFNLIQSLSMGQ-NAVNTVNINKTGEWLAFGSAKLGQLLVYE 325
Query: 386 VKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETP 444
+S++ + K GH ++ + +S +G L T + DG +K+WD+R F ++ +
Sbjct: 326 WQSESYILKQQGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRS--GFCLMTFTEHTSA 383
Query: 445 TNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIK--TFPDLSGTGKA--TCVKFGPDA 500
V F G L +S D +++A W+ I+ F + T + C+ P
Sbjct: 384 VTQVQFAKRGQVLFSSSLD------GTIRA-WDLIRFRNFKTFTATSRVQFNCLAVDPSG 436
Query: 501 KYIAVGSMD 509
+ I GS D
Sbjct: 437 EVIVGGSQD 445
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 61/293 (20%), Positives = 115/293 (39%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA---DKT 288
H ++ G + L++ ++ +LS V +V G+ GSA
Sbjct: 263 HPQSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVNTVNINKTGEWLAFGSAKLGQLL 322
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
V WQ SE +Y K + H + + VT S D +D+ SG CL
Sbjct: 323 VYEWQ-SE--SYILKQ--QGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTF 377
Query: 349 SDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTAISF 407
++ T F G +L + + + ++ WD+ N F ++
Sbjct: 378 TE-----HTSAVTQVQFAKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNCLAV 432
Query: 408 SENGYYLATAAHDGVKLWDLRKLKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD--I 464
+G + + D +++ + ++ + +S + E P + + F S LA AS D I
Sbjct: 433 DPSGEVIVGGSQDTFEIY-VWSVQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTI 491
Query: 465 RVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
R++ + S +T + A C+ PD K +AV ++D ++ +F +
Sbjct: 492 RIWNIFSRN------QTVEPIEIQSDALCLTMRPDCKELAVSTLDGHVTIFDI 538
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 216 (81.1 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 62/218 (28%), Positives = 112/218 (51%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+H + + +G D ++D +GQ + L GH V V++ +G ++G+ D V+
Sbjct: 387 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 444
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW + C HTL+ HT V ++ + V+ SLD + +D+ +G C+ ++
Sbjct: 445 VWDPETE---TCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVETGNCIHTLT- 498
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG---HVGAVTAISF 407
G + TS D +++ +G +++ VKIWD+K+ + G H AVT + F
Sbjct: 499 ----GH-QSLTSGMELKDNILV-SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 552
Query: 408 SENGYYLATAAHDG-VKLWDLRK---LKNFRSFESSDS 441
++N ++ T++ DG VKLWDL+ ++N + ES S
Sbjct: 553 NKN--FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 588
Score = 210 (79.0 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 75/319 (23%), Positives = 148/319 (46%)
Query: 204 IDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG 263
ID R +L S + K +++ + + + I +G D ++ +G+ + TL G
Sbjct: 281 IDTNWRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 339
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H+ V S + ++ ++GS D+T++VW +E G +C HTL HT+ V+ + +H K
Sbjct: 340 HTGGVWSSQM--RDNIIISGSTDRTLKVWN-AETG--ECIHTLYGHTSTVRCMHLH--EK 392
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
V+ S D T +D+ +G CL + G + DG + +G + +VK+
Sbjct: 393 RVVSGSRDATLRVWDIETGQCLHVLM-----GHVAAVRCVQY--DGRRVVSGAYDFMVKV 445
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSE 442
WD +++ + GH V ++ F +G ++ + + D +++WD+ + S
Sbjct: 446 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 503
Query: 443 TPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK----ATCVKFGP 498
T + + L +AD V ++ +K C++T L G K TC++F
Sbjct: 504 TS----GMELKDNILVSGNADSTV-KIWDIKTG-QCLQT---LQGPNKHQSAVTCLQFNK 554
Query: 499 DAKYIAVGSMDRNLRVFGL 517
+ ++ S D ++++ L
Sbjct: 555 N--FVITSSDDGTVKLWDL 571
Score = 165 (63.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 51/198 (25%), Positives = 92/198 (46%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+ Y + +G D ++D + + TL GH+ +V S++F +G ++GS D ++R
Sbjct: 427 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 484
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW E GN C HTL H + + + + V+ + D+T +D+ +G CL +
Sbjct: 485 VWD-VETGN--CIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQ- 538
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA---NVAKFD--GHVGAVTAI 405
G + T F+ + +I T + + VK+WD+K+ N+ + G G V I
Sbjct: 539 -GPNKHQSAVTCLQFNKNFVI--TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 595
Query: 406 SFSENGYYLATAAHDGVK 423
S A + +G +
Sbjct: 596 RASNTKLVCAVGSRNGTE 613
Score = 40 (19.1 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 27 LIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKP 61
L E ++L KC G +D+ + IK K++KP
Sbjct: 234 LAEDNLLWREKCKEEG----IDEPLHIKRRKVIKP 264
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 205 (77.2 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 68/264 (25%), Positives = 116/264 (43%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
+ LSGH +V KF G + D+ + +W + G+ D TLK H+ V +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELH 117
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ +AS D T +D +G + ++ G A P ++ TG+
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRGPQ--LVCTGSD 173
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK-NFRS 435
+ VK+WD++ +A V F + V A++F++ + + D +K+WDLR+ K +
Sbjct: 174 DGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC 493
+DS T + GSYL + D +RV+ V C+K F +
Sbjct: 233 RGHADSVT---GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Query: 494 VK--FGPDAKYIAVGSMDRNLRVF 515
++ + PD IA GS DR + V+
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVW 313
Score = 187 (70.9 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 78/291 (26%), Positives = 119/291 (40%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
H + +A+ G D +L++ TL GHS V + + T+G + + S DKTV
Sbjct: 76 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV-TASLDNTWCFYDLSSGICLTQVS 349
VW SE G K LK HT+ V + V T S D T +D+ +
Sbjct: 136 VWD-SETGER-VKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ 192
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE 409
+ + F+ + +G + +K+WD++ GH +VT +S S
Sbjct: 193 NTYQ------VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 410 NGYYLATAAHDG-VKLWDLR----KLKNFRSFESSDSETPTNSV--DFDHSGSYLAVASA 462
G YL + A D V++WD+R K + + F+ + N + + GS +A SA
Sbjct: 247 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 463 DIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNL 512
D VY D + L G G V F PD I S D+ L
Sbjct: 307 DRFVYVW-----DTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 204 (76.9 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 67/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ +T+S D T +D+ +G
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETG--QQT 177
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
V AG G S + PDG +G +A +K+WDV+ F GH + A++F
Sbjct: 178 VGFAGHSG---DVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NGY T + D +L+DLR + + + SV F SG L D
Sbjct: 235 FPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++K D + D + +C+ D +A GS D L+++
Sbjct: 295 NIWDAMKGDRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 172 (65.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 63/266 (23%), Positives = 111/266 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ + LDN Y L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNFVACGGLDNICSIYSLKTREGNVRVSRE-LPGHT-GYLSCCRFLDDNQII-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + +G + A D +KLWD+R ++F
Sbjct: 164 TTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFI 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N+V F +G Y +D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAVAFFPNG-YAFTTGSDDATCRLFDLRADQELLMYSHDNIICG-ITSVAFS 279
Query: 498 PDAKYIAVGSMDRNLRVF-GLPGNDA 522
+ + G D N ++ + G+ A
Sbjct: 280 RSGRLLLAGYDDFNCNIWDAMKGDRA 305
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 204 (76.9 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 67/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ +T+S D T +D+ +G
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETG--QQT 177
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
V AG G S + PDG +G +A +K+WDV+ F GH + A++F
Sbjct: 178 VGFAGHSG---DVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NGY T + D +L+DLR + + + SV F SG L D
Sbjct: 235 FPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++K D + D + +C+ D +A GS D L+++
Sbjct: 295 NIWDAMKGDRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 172 (65.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 63/266 (23%), Positives = 111/266 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ + LDN Y L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNFVACGGLDNICSIYSLKTREGNVRVSRE-LPGHT-GYLSCCRFLDDNQII-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + +G + A D +KLWD+R ++F
Sbjct: 164 TTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFI 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N+V F +G Y +D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAVAFFPNG-YAFTTGSDDATCRLFDLRADQELLMYSHDNIICG-ITSVAFS 279
Query: 498 PDAKYIAVGSMDRNLRVF-GLPGNDA 522
+ + G D N ++ + G+ A
Sbjct: 280 RSGRLLLAGYDDFNCNIWDAMKGDRA 305
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 204 (76.9 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 67/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ +T+S D T +D+ +G
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETG--QQT 177
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
V AG G S + PDG +G +A +K+WDV+ F GH + A++F
Sbjct: 178 VGFAGHSG---DVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NGY T + D +L+DLR + + + SV F SG L D
Sbjct: 235 FPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++K D + D + +C+ D +A GS D L+++
Sbjct: 295 NIWDAMKGDRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 172 (65.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 63/266 (23%), Positives = 111/266 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ + LDN Y L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNFVACGGLDNICSIYSLKTREGNVRVSRE-LPGHT-GYLSCCRFLDDNQII-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + +G + A D +KLWD+R ++F
Sbjct: 164 TTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFI 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N+V F +G Y +D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAVAFFPNG-YAFTTGSDDATCRLFDLRADQELLMYSHDNIICG-ITSVAFS 279
Query: 498 PDAKYIAVGSMDRNLRVF-GLPGNDA 522
+ + G D N ++ + G+ A
Sbjct: 280 RSGRLLLAGYDDFNCNIWDAMKGDRA 305
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 204 (76.9 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 67/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ +T+S D T +D+ +G
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETG--QQT 177
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
V AG G S + PDG +G +A +K+WDV+ F GH + A++F
Sbjct: 178 VGFAGHSG---DVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NGY T + D +L+DLR + + + SV F SG L D
Sbjct: 235 FPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++K D + D + +C+ D +A GS D L+++
Sbjct: 295 NIWDAMKGDRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 172 (65.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 63/266 (23%), Positives = 111/266 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ + LDN Y L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNFVACGGLDNICSIYSLKTREGNVRVSRE-LPGHT-GYLSCCRFLDDNQII-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + +G + A D +KLWD+R ++F
Sbjct: 164 TTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFI 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N+V F +G Y +D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAVAFFPNG-YAFTTGSDDATCRLFDLRADQELLMYSHDNIICG-ITSVAFS 279
Query: 498 PDAKYIAVGSMDRNLRVF-GLPGNDA 522
+ + G D N ++ + G+ A
Sbjct: 280 RSGRLLLAGYDDFNCNIWDAMKGDRA 305
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 204 (76.9 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 67/289 (23%), Positives = 116/289 (40%)
Query: 231 IHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D ++ + D +++D + V + S V + + G+ G D
Sbjct: 61 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L HT + N+ +T+S D T +D+ +G
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETG--QQT 177
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
V AG G S + PDG +G +A +K+WDV+ F GH + A++F
Sbjct: 178 VGFAGHSG---DVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NGY T + D +L+DLR + + + SV F SG L D
Sbjct: 235 FPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++K D + D + +C+ D +A GS D L+++
Sbjct: 295 NIWDAMKGDRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 172 (65.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 63/266 (23%), Positives = 111/266 (41%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + T+ L ++ S D + +W H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ + LDN Y L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGNFVACGGLDNICSIYSLKTREGNVRVSRE-LPGHT-GYLSCCRFLDDNQII-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ F GH G V ++S + +G + A D +KLWD+R ++F
Sbjct: 164 TTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFI 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N+V F +G Y +D ++ ++AD + D G T V F
Sbjct: 224 GHESDI--NAVAFFPNG-YAFTTGSDDATCRLFDLRADQELLMYSHDNIICG-ITSVAFS 279
Query: 498 PDAKYIAVGSMDRNLRVF-GLPGNDA 522
+ + G D N ++ + G+ A
Sbjct: 280 RSGRLLLAGYDDFNCNIWDAMKGDRA 305
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 201 (75.8 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 69/283 (24%), Positives = 125/283 (44%)
Query: 233 YSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+S D + T D ++ SG+++ L+GH V S F +G L + S+D ++R
Sbjct: 34 FSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIR 93
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
+W + C H LK H V+ V+ +K + D +++ SG + +
Sbjct: 94 LWDVARS---KCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLV- 149
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKF---DGHVGAVTAISF 407
G + S+ F P L TG+ ++ V IWD+++ V + +GH G ++ + +
Sbjct: 150 ----GHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCY 205
Query: 408 SENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVA--SADI 464
S +G LA+ + D + +W + N + NS+ F LA A S +
Sbjct: 206 SASGL-LASGSWDKTICVW--KPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTV 262
Query: 465 RVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGS 507
+V+ + K C++T + A C+ F PD K + G+
Sbjct: 263 KVWDCLTGK----CLETLKGMLDVAHA-CI-FTPDGKLLVSGA 299
Score = 168 (64.2 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 51/190 (26%), Positives = 79/190 (41%)
Query: 231 IHYSKDV--IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+ +S D +A+GG D A++++ SG+ V L GH + S F D TGS D T
Sbjct: 116 VSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDST 175
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
V +W H L+ HT + + A+ + S D T C + ++ Q+
Sbjct: 176 VHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQL 234
Query: 349 SDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS 408
G S AF PD L L + VK+WD + + G + A F+
Sbjct: 235 K-----GHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFT 289
Query: 409 ENGYYLATAA 418
+G L + A
Sbjct: 290 PDGKLLVSGA 299
Score = 153 (58.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 64/255 (25%), Positives = 104/255 (40%)
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H +V F +G LT S D V VW G++ G + L H V++ +
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVW-GTKSGRLLWR--LAGHRGPVKSCCFSPDGR 81
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
++S D++ +D++ CL + G + +F PD L +G + +
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLK-----GHQRSVETVSFSPDSKQLASGGWDKRAIV 136
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSE 442
W+V+S V GH ++ + FS LAT + D V +WDLR S+ + +
Sbjct: 137 WEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGH 196
Query: 443 TPTNS-VDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDA 500
T S + + SG LA S D + K N + L G T + F PD
Sbjct: 197 TGNISCLCYSASG-LLASGSWD---KTICVWKPTTNNLPL--QLKGHTIWVNSLAFSPDE 250
Query: 501 KYIAVGSMDRNLRVF 515
+A R ++V+
Sbjct: 251 LKLASAGYSRTVKVW 265
Score = 132 (51.5 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 43/167 (25%), Positives = 73/167 (43%)
Query: 355 GRPEGYTS-AAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYY 413
G+ G + +AF PDG L T + + V +W KS + + GH G V + FS +G
Sbjct: 23 GQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRL 82
Query: 414 LATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIR--VYQVA 470
+A+++ D ++LWD+ + K + T V F LA D R V++V
Sbjct: 83 IASSSSDHSIRLWDVARSKCLHVLKGHQRSVET--VSFSPDSKQLASGGWDKRAIVWEVQ 140
Query: 471 SVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
S + + + + F P + +A GS D + ++ L
Sbjct: 141 SGRRVHLLVGHCDSIQSSD------FSPTSDSLATGSWDSTVHIWDL 181
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 43/155 (27%), Positives = 72/155 (46%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFD-RPSGQIVT--TLSGHSKKVTSVKFVTEGDLFLT 282
I S D + D +ATG D+ ++D R S +V+ L GH+ ++ + + G L +
Sbjct: 155 IQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLAS 213
Query: 283 GSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSG 342
GS DKT+ VW+ + + N + LK HT V ++ +A T +D +G
Sbjct: 214 GSWDKTICVWKPTTN-NLPLQ--LKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTG 270
Query: 343 ICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
CL + G + + F PDG +L +G +
Sbjct: 271 KCLETLK-----GMLDVAHACIFTPDGKLLVSGAA 300
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 203 (76.5 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 78/306 (25%), Positives = 139/306 (45%)
Query: 234 SKDVIATGGVDTNAVLF-----DRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+ D+I T D + +L+ D+ G L+GHS V V ++G L+GS D
Sbjct: 27 NSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 86
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
+R+W + + HT +V +V N+ V+AS D T ++ + G C +
Sbjct: 87 LRLWDLATG---ETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTI 142
Query: 349 SDAGTDGRPEGYTSAAFHPDGLI--LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
S+ DG E + F P+ L+ + + + + VK+W++++ GH G + ++
Sbjct: 143 SEG--DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVA 200
Query: 407 FSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-I 464
S +G A+ DGV LWDL + K S E+ +S+ F + +L A+ + I
Sbjct: 201 VSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI---IHSLCFSPNRYWLCAATENSI 257
Query: 465 RVYQVAS--VKADWNC-IKTFPDLS----GTGK------ATCVKFGPDAKYIAVGSMDRN 511
R++ + S V D +K+ + + GTG T + + D + G D
Sbjct: 258 RIWDLESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGV 317
Query: 512 LRVFGL 517
+RV+G+
Sbjct: 318 VRVWGI 323
Score = 188 (71.2 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 67/267 (25%), Positives = 116/267 (43%)
Query: 168 KLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIV 227
+ HT I AI + + + ++ R K + L D + Y +A L T V
Sbjct: 12 RAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDD--KSYG-VAQRRL--TGHSHFV 66
Query: 228 SLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
D+ S D +G D L+D +G+ GH+K V SV F T+ ++ S
Sbjct: 67 E-DVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASR 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKD---HTAEVQAVTVHATNKY--FVTASLDNTWCFYDLS 340
D+T+++W G +CK+T+ + H V V V+AS D T ++L
Sbjct: 126 DRTIKLWNTL--G--ECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+ C + S G G + A PDG + +G + ++ +WD+ + +
Sbjct: 182 N--CKLRNSLVGHSGY---LNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-S 235
Query: 401 AVTAISFSENGYYLATAAHDGVKLWDL 427
+ ++ FS N Y+L A + +++WDL
Sbjct: 236 IIHSLCFSPNRYWLCAATENSIRIWDL 262
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 213 (80.0 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 61/215 (28%), Positives = 111/215 (51%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+H + + +G D ++D +GQ + L GH V V++ +G ++G+ D V+
Sbjct: 389 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 446
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW + C HTL+ HT V ++ + V+ SLD + +D+ +G C+ ++
Sbjct: 447 VWDPETE---TCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVETGNCIHTLT- 500
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG---HVGAVTAISF 407
G + TS D +++ +G +++ VKIWD+K+ + G H AVT + F
Sbjct: 501 ----GH-QSLTSGMELKDNILV-SGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQF 554
Query: 408 SENGYYLATAAHDG-VKLWDLRK---LKNFRSFES 438
++N ++ T++ DG VKLWDL+ ++N + ES
Sbjct: 555 NKN--FVITSSDDGTVKLWDLKTGEFIRNLVTLES 587
Score = 212 (79.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 74/316 (23%), Positives = 147/316 (46%)
Query: 204 IDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG 263
ID R +L S + K +++ + + + I +G D ++ +G+ + TL G
Sbjct: 283 IDTNWRRGELRSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 341
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H+ V S + ++ ++GS D+T++VW +E G +C HTL HT+ V+ + +H K
Sbjct: 342 HTGGVWSSQM--RDNIIISGSTDRTLKVWN-AETG--ECIHTLYGHTSTVRCMHLH--EK 394
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
V+ S D T +D+ +G CL + G + DG + +G + +VK+
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLM-----GHVAAVRCVQY--DGRRVVSGAYDFMVKV 447
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSE 442
WD +++ + GH V ++ F +G ++ + + D +++WD+ + S
Sbjct: 448 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 505
Query: 443 TPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKA-TCVKFGPDAK 501
T + + L +AD V ++ +K C++T S A TC++F +
Sbjct: 506 TS----GMELKDNILVSGNADSTV-KIWDIKTG-QCLQTLQGPSKHQSAVTCLQFNKN-- 557
Query: 502 YIAVGSMDRNLRVFGL 517
++ S D ++++ L
Sbjct: 558 FVITSSDDGTVKLWDL 573
Score = 41 (19.5 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 27 LIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKP 61
L E ++L KC G +D+ + IK KI+KP
Sbjct: 236 LAEDNLLWREKCKEEG----IDEPLHIKRRKIIKP 266
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 204 (76.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 67/264 (25%), Positives = 116/264 (43%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
+ LSGH +V KF G + D+ + +W + G+ D TLK H+ V +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELH 116
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ +AS D T +D +G + ++ G A P ++ TG+
Sbjct: 117 YNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRGPQ--LVCTGSD 172
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK-NFRS 435
+ VK+WD++ +A + F + V A++F++ + + D +K+WDLR+ K +
Sbjct: 173 DGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC 493
+DS T + GSYL + D +RV+ V C+K F +
Sbjct: 232 RGHADSVT---GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 288
Query: 494 VK--FGPDAKYIAVGSMDRNLRVF 515
++ + PD IA GS DR + V+
Sbjct: 289 LRCSWSPDGSKIAAGSADRFVYVW 312
Score = 187 (70.9 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 78/291 (26%), Positives = 119/291 (40%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
H + +A+ G D +L++ TL GHS V + + T+G + + S DKTV
Sbjct: 75 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 134
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV-TASLDNTWCFYDLSSGICLTQVS 349
VW SE G K LK HT+ V + V T S D T +D+ +
Sbjct: 135 VWD-SETGER-VKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 191
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE 409
+ + F+ + +G + +K+WD++ GH +VT +S S
Sbjct: 192 NTYQ------VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 245
Query: 410 NGYYLATAAHDG-VKLWDLR----KLKNFRSFESSDSETPTNSV--DFDHSGSYLAVASA 462
G YL + A D V++WD+R K + + F+ + N + + GS +A SA
Sbjct: 246 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 305
Query: 463 DIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNL 512
D VY D + L G G V F PD I S D+ L
Sbjct: 306 DRFVYVW-----DTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRL 351
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 63/251 (25%), Positives = 108/251 (43%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEG-DLFLTGSA 285
+++HY+ D ++ + D ++D +G+ V L GH+ V S G L TGS
Sbjct: 113 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 172
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D TV++W + T ++ T +V AVT + T+ ++ +DN +DL L
Sbjct: 173 DGTVKLWDIRKKAAIQ---TFQN-TYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-L 227
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN----VAKFDGHVGA 401
T G + T + +G L + + V++WDV+ A V F G+V
Sbjct: 228 TYTMR----GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 402 ----VTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456
+ S+S +G +A + D V +WD + ++ N V F
Sbjct: 284 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL--YKLPGHAGSINEVAFHPDEPI 341
Query: 457 LAVASADIRVY 467
+ AS+D R+Y
Sbjct: 342 IISASSDKRLY 352
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 204 (76.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 67/264 (25%), Positives = 116/264 (43%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
+ LSGH +V KF G + D+ + +W + G+ D TLK H+ V +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELH 117
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ +AS D T +D +G + ++ G A P ++ TG+
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRGPQ--LVCTGSD 173
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK-NFRS 435
+ VK+WD++ +A + F + V A++F++ + + D +K+WDLR+ K +
Sbjct: 174 DGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC 493
+DS T + GSYL + D +RV+ V C+K F +
Sbjct: 233 RGHADSVT---GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Query: 494 VK--FGPDAKYIAVGSMDRNLRVF 515
++ + PD IA GS DR + V+
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVW 313
Score = 187 (70.9 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 78/291 (26%), Positives = 119/291 (40%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
H + +A+ G D +L++ TL GHS V + + T+G + + S DKTV
Sbjct: 76 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV-TASLDNTWCFYDLSSGICLTQVS 349
VW SE G K LK HT+ V + V T S D T +D+ +
Sbjct: 136 VWD-SETGER-VKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 192
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE 409
+ + F+ + +G + +K+WD++ GH +VT +S S
Sbjct: 193 NTYQ------VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 410 NGYYLATAAHDG-VKLWDLR----KLKNFRSFESSDSETPTNSV--DFDHSGSYLAVASA 462
G YL + A D V++WD+R K + + F+ + N + + GS +A SA
Sbjct: 247 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 463 DIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNL 512
D VY D + L G G V F PD I S D+ L
Sbjct: 307 DRFVYVW-----DTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 63/251 (25%), Positives = 108/251 (43%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEG-DLFLTGSA 285
+++HY+ D ++ + D ++D +G+ V L GH+ V S G L TGS
Sbjct: 114 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 173
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D TV++W + T ++ T +V AVT + T+ ++ +DN +DL L
Sbjct: 174 DGTVKLWDIRKKAAIQ---TFQN-TYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-L 228
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN----VAKFDGHVGA 401
T G + T + +G L + + V++WDV+ A V F G+V
Sbjct: 229 TYTMR----GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 402 ----VTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456
+ S+S +G +A + D V +WD + ++ N V F
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL--YKLPGHAGSINEVAFHPDEPI 342
Query: 457 LAVASADIRVY 467
+ AS+D R+Y
Sbjct: 343 ILSASSDKRLY 353
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 204 (76.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 67/264 (25%), Positives = 116/264 (43%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
+ LSGH +V KF G + D+ + +W + G+ D TLK H+ V +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELH 117
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ +AS D T +D +G + ++ G A P ++ TG+
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRGPQ--LVCTGSD 173
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK-NFRS 435
+ VK+WD++ +A + F + V A++F++ + + D +K+WDLR+ K +
Sbjct: 174 DGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC 493
+DS T + GSYL + D +RV+ V C+K F +
Sbjct: 233 RGHADSVT---GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Query: 494 VK--FGPDAKYIAVGSMDRNLRVF 515
++ + PD IA GS DR + V+
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVW 313
Score = 187 (70.9 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 78/291 (26%), Positives = 119/291 (40%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
H + +A+ G D +L++ TL GHS V + + T+G + + S DKTV
Sbjct: 76 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV-TASLDNTWCFYDLSSGICLTQVS 349
VW SE G K LK HT+ V + V T S D T +D+ +
Sbjct: 136 VWD-SETGER-VKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 192
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE 409
+ + F+ + +G + +K+WD++ GH +VT +S S
Sbjct: 193 NTYQ------VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 410 NGYYLATAAHDG-VKLWDLR----KLKNFRSFESSDSETPTNSV--DFDHSGSYLAVASA 462
G YL + A D V++WD+R K + + F+ + N + + GS +A SA
Sbjct: 247 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 463 DIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNL 512
D VY D + L G G V F PD I S D+ L
Sbjct: 307 DRFVYVW-----DTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 63/251 (25%), Positives = 108/251 (43%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEG-DLFLTGSA 285
+++HY+ D ++ + D ++D +G+ V L GH+ V S G L TGS
Sbjct: 114 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 173
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D TV++W + T ++ T +V AVT + T+ ++ +DN +DL L
Sbjct: 174 DGTVKLWDIRKKAAIQ---TFQN-TYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-L 228
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN----VAKFDGHVGA 401
T G + T + +G L + + V++WDV+ A V F G+V
Sbjct: 229 TYTMR----GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 402 ----VTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456
+ S+S +G +A + D V +WD + ++ N V F
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL--YKLPGHAGSINEVAFHPDEPI 342
Query: 457 LAVASADIRVY 467
+ AS+D R+Y
Sbjct: 343 ILSASSDKRLY 353
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 216 (81.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 62/218 (28%), Positives = 112/218 (51%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+H + + +G D ++D +GQ + L GH V V++ +G ++G+ D V+
Sbjct: 467 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 524
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW + C HTL+ HT V ++ + V+ SLD + +D+ +G C+ ++
Sbjct: 525 VWDPETE---TCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVETGNCIHTLT- 578
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG---HVGAVTAISF 407
G + TS D +++ +G +++ VKIWD+K+ + G H AVT + F
Sbjct: 579 ----GH-QSLTSGMELKDNILV-SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 632
Query: 408 SENGYYLATAAHDG-VKLWDLRK---LKNFRSFESSDS 441
++N ++ T++ DG VKLWDL+ ++N + ES S
Sbjct: 633 NKN--FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 668
Score = 210 (79.0 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 75/319 (23%), Positives = 148/319 (46%)
Query: 204 IDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG 263
ID R +L S + K +++ + + + I +G D ++ +G+ + TL G
Sbjct: 361 IDTNWRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 419
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H+ V S + ++ ++GS D+T++VW +E G +C HTL HT+ V+ + +H K
Sbjct: 420 HTGGVWSSQM--RDNIIISGSTDRTLKVWN-AETG--ECIHTLYGHTSTVRCMHLH--EK 472
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
V+ S D T +D+ +G CL + G + DG + +G + +VK+
Sbjct: 473 RVVSGSRDATLRVWDIETGQCLHVLM-----GHVAAVRCVQY--DGRRVVSGAYDFMVKV 525
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSE 442
WD +++ + GH V ++ F +G ++ + + D +++WD+ + S
Sbjct: 526 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 583
Query: 443 TPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK----ATCVKFGP 498
T + + L +AD V ++ +K C++T L G K TC++F
Sbjct: 584 TS----GMELKDNILVSGNADSTV-KIWDIKTG-QCLQT---LQGPNKHQSAVTCLQFNK 634
Query: 499 DAKYIAVGSMDRNLRVFGL 517
+ ++ S D ++++ L
Sbjct: 635 N--FVITSSDDGTVKLWDL 651
Score = 165 (63.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 51/198 (25%), Positives = 92/198 (46%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+ Y + +G D ++D + + TL GH+ +V S++F +G ++GS D ++R
Sbjct: 507 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 564
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW E GN C HTL H + + + + V+ + D+T +D+ +G CL +
Sbjct: 565 VWD-VETGN--CIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQ- 618
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA---NVAKFD--GHVGAVTAI 405
G + T F+ + +I T + + VK+WD+K+ N+ + G G V I
Sbjct: 619 -GPNKHQSAVTCLQFNKNFVI--TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 675
Query: 406 SFSENGYYLATAAHDGVK 423
S A + +G +
Sbjct: 676 RASNTKLVCAVGSRNGTE 693
Score = 40 (19.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 27 LIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKP 61
L E ++L KC G +D+ + IK K++KP
Sbjct: 314 LAEDNLLWREKCKEEG----IDEPLHIKRRKVIKP 344
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 199 (75.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 75/260 (28%), Positives = 115/260 (44%)
Query: 264 HSKKVTSVKFVTE----GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
H + SV + T + +TGS D V+VW+ D D + +L+ H V +V +
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKW-RDERLDLQWSLEGHQLGVVSVDIS 73
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
T ++SLD +DL +G + + DAG P + AF PD L TGT
Sbjct: 74 HTLPIAASSSLDAHIRLWDLENGKQIKSI-DAG----PVDAWTLAFSPDSQYLATGTHVG 128
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFES 438
V I+ V+S D + +I++S +G YLA+ A DG+ ++D+ K + E
Sbjct: 129 KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
Query: 439 SDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC-VK 495
P S+ F L AS D I++Y V N T LSG V
Sbjct: 189 H--AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NLAGT---LSGHASWVLNVA 239
Query: 496 FGPDAKYIAVGSMDRNLRVF 515
F PD + S D++++V+
Sbjct: 240 FCPDDTHFVSSSSDKSVKVW 259
Score = 175 (66.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 51/233 (21%), Positives = 111/233 (47%)
Query: 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
G+VS+DI ++ + A+ +D + L+D +G+ + ++ ++ F + TG+
Sbjct: 66 GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT 125
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
V ++ G E G + ++L + ++ KY + ++D +D+++G
Sbjct: 126 HVGKVNIF-GVESGKKE--YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVA-KFDGHVGAVT 403
L + +G S F PD +L T + + +KI+DV+ AN+A GH V
Sbjct: 183 LHTL-----EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGTLSGHASWVL 236
Query: 404 AISFS-ENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
++F ++ +++++++ VK+WD+ +F D + V ++ +GS
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF--FDHQDQVWGVKYNGNGS 287
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 62/279 (22%), Positives = 122/279 (43%)
Query: 234 SKDVIATGGVDTNAVLFD-RPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
+ + + TG +D ++ R + +L GH V SV + + S D +R+
Sbjct: 31 NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 90
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
W E+G K ++ + + ++Y T + + + SG +
Sbjct: 91 WD-LENGK-QIK-SIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG-----KKEY 142
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411
D R + S A+ PDG L +G + ++ I+D+ + + +GH + +++FS +
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 412 YYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQ 468
L TA+ DG +K++D++ N S + N V F ++ +S+D ++V+
Sbjct: 203 QLLVTASDDGYIKIYDVQHA-NLAGTLSGHASWVLN-VAFCPDDTHFVSSSSDKSVKVWD 260
Query: 469 VASVKADWNCIKTFPDLSGTGKATCVKF-GPDAKYIAVG 506
V + C+ TF D + VK+ G +K ++VG
Sbjct: 261 VGTR----TCVHTFFDHQD--QVWGVKYNGNGSKIVSVG 293
Score = 125 (49.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 216 HPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT 275
H L + P I SL ++ T D ++D + TLSGH+ V +V F
Sbjct: 184 HTLEGHAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP 242
Query: 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVT 327
+ F++ S+DK+V+VW + G C HT DH +V V + V+
Sbjct: 243 DDTHFVSSSSDKSVKVW---DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVS 291
Score = 124 (48.7 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/150 (24%), Positives = 72/150 (48%)
Query: 374 TGTSEALVKIWDVKSQANVAKF--DGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKL 430
TG+ + LVK+W + + ++ +GH V ++ S A+++ D ++LWDL
Sbjct: 37 TGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENG 96
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVAS--ADIRVYQVASVKADWNCIKTFPDLSGT 488
K +S ++ + T + F YLA + + ++ V S K +++ L
Sbjct: 97 KQIKSIDAGPVDAWT--LAFSPDSQYLATGTHVGKVNIFGVESGKKEYS-------LDTR 147
Query: 489 GK-ATCVKFGPDAKYIAVGSMDRNLRVFGL 517
GK + + PD KY+A G++D + +F +
Sbjct: 148 GKFILSIAYSPDGKYLASGAIDGIINIFDI 177
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 216 (81.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 62/218 (28%), Positives = 112/218 (51%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+H + + +G D ++D +GQ + L GH V V++ +G ++G+ D V+
Sbjct: 472 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 529
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW + C HTL+ HT V ++ + V+ SLD + +D+ +G C+ ++
Sbjct: 530 VWDPETE---TCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVETGNCIHTLT- 583
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG---HVGAVTAISF 407
G + TS D +++ +G +++ VKIWD+K+ + G H AVT + F
Sbjct: 584 ----GH-QSLTSGMELKDNILV-SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 637
Query: 408 SENGYYLATAAHDG-VKLWDLRK---LKNFRSFESSDS 441
++N ++ T++ DG VKLWDL+ ++N + ES S
Sbjct: 638 NKN--FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 673
Score = 210 (79.0 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 75/319 (23%), Positives = 148/319 (46%)
Query: 204 IDALERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG 263
ID R +L S + K +++ + + + I +G D ++ +G+ + TL G
Sbjct: 366 IDTNWRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 424
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H+ V S + ++ ++GS D+T++VW +E G +C HTL HT+ V+ + +H K
Sbjct: 425 HTGGVWSSQM--RDNIIISGSTDRTLKVWN-AETG--ECIHTLYGHTSTVRCMHLH--EK 477
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
V+ S D T +D+ +G CL + G + DG + +G + +VK+
Sbjct: 478 RVVSGSRDATLRVWDIETGQCLHVLM-----GHVAAVRCVQY--DGRRVVSGAYDFMVKV 530
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSE 442
WD +++ + GH V ++ F +G ++ + + D +++WD+ + S
Sbjct: 531 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 588
Query: 443 TPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK----ATCVKFGP 498
T + + L +AD V ++ +K C++T L G K TC++F
Sbjct: 589 TS----GMELKDNILVSGNADSTV-KIWDIKTG-QCLQT---LQGPNKHQSAVTCLQFNK 639
Query: 499 DAKYIAVGSMDRNLRVFGL 517
+ ++ S D ++++ L
Sbjct: 640 N--FVITSSDDGTVKLWDL 656
Score = 165 (63.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 51/198 (25%), Positives = 92/198 (46%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+ Y + +G D ++D + + TL GH+ +V S++F +G ++GS D ++R
Sbjct: 512 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 569
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW E GN C HTL H + + + + V+ + D+T +D+ +G CL +
Sbjct: 570 VWD-VETGN--CIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQ- 623
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA---NVAKFD--GHVGAVTAI 405
G + T F+ + +I T + + VK+WD+K+ N+ + G G V I
Sbjct: 624 -GPNKHQSAVTCLQFNKNFVI--TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 680
Query: 406 SFSENGYYLATAAHDGVK 423
S A + +G +
Sbjct: 681 RASNTKLVCAVGSRNGTE 698
Score = 40 (19.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 27 LIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKP 61
L E ++L KC G +D+ + IK K++KP
Sbjct: 319 LAEDNLLWREKCKEEG----IDEPLHIKRRKVIKP 349
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 72/226 (31%), Positives = 103/226 (45%)
Query: 251 DRPSGQIVTT-LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDH 309
DR Q T L GHS V V F + L+ S DKTVR+W S D Y + K H
Sbjct: 502 DRHKPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLW--SLD-TYTALVSYKGH 558
Query: 310 TAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG 369
T V V YFVTAS D T + + I ++ G FHP+
Sbjct: 559 TQPVWDVKFSPLGHYFVTASHDQTARLW-ATDHIYPLRIFA----GHINDVDCVEFHPNS 613
Query: 370 LILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVK-LWDL- 427
+ TG+S+ ++WDV + V F GH +V ++ S +G +LA+ DG+ +WD+
Sbjct: 614 NYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIG 673
Query: 428 --RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
R+LK+ R + S+ F G+ L AD +RV+ V
Sbjct: 674 SGRRLKSMRGH----ARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Score = 206 (77.6 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 51/177 (28%), Positives = 83/177 (46%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
+ + GH++ V VKF G F+T S D+T R+W + D Y + H +V V
Sbjct: 552 LVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLW--ATDHIYPLR-IFAGHINDVDCVE 608
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
H + Y T S D T +D+ +G C+ G A PDG L +G
Sbjct: 609 FHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFL-----GHTNSVNCLAVSPDGRWLASGGE 663
Query: 378 EALVKIWDVKSQANVAKFDGHVGA-VTAISFSENGYYLATAAHDG-VKLWDLRKLKN 432
+ ++ +WD+ S + GH A + +++FS +G L + D V++WD++K N
Sbjct: 664 DGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKNTN 720
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 55/190 (28%), Positives = 82/190 (43%)
Query: 206 ALERYTQLASHPLHKTSKPGIVSLDIHYSK--DVIATGGVDTNAVLFDRPSGQIVTTLSG 263
+L+ YT L S+ H ++P D+ +S T D A L+ + +G
Sbjct: 545 SLDTYTALVSYKGH--TQP---VWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAG 599
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H V V+F + TGS+DKT R+W GN C HT V + V +
Sbjct: 600 HINDVDCVEFHPNSNYVFTGSSDKTCRMWD-VHTGN--CVRVFLGHTNSVNCLAVSPDGR 656
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
+ + D C +D+ SG L + R Y S AF DG +L +G ++ V++
Sbjct: 657 WLASGGEDGIICVWDIGSGRRLKSMRG---HARASLY-SLAFSRDGTVLVSGCADNSVRV 712
Query: 384 WDVKSQANVA 393
WDVK N A
Sbjct: 713 WDVKKNTNDA 722
Score = 160 (61.4 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 38/147 (25%), Positives = 70/147 (47%)
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV- 422
+F PD L + + + V++W + + + + GH V + FS G+Y TA+HD
Sbjct: 524 SFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTA 583
Query: 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTF 482
+LW + R F ++ + V+F + +Y+ S+D + ++ V NC++ F
Sbjct: 584 RLWATDHIYPLRIFAGHINDV--DCVEFHPNSNYVFTGSSD-KTCRMWDVHTG-NCVRVF 639
Query: 483 PDLSGTGKATCVKFGPDAKYIAVGSMD 509
L T C+ PD +++A G D
Sbjct: 640 --LGHTNSVNCLAVSPDGRWLASGGED 664
Score = 142 (55.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 49/179 (27%), Positives = 75/179 (41%)
Query: 361 TSAAFHPDGLILGTGTSEALVKIWDV--------------KSQANVAKFDGHVGAVTAIS 406
T F+ D ++ G ++ +K+W + K Q N K GH G V +S
Sbjct: 465 TCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVS 524
Query: 407 FSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIR 465
FS + YL + + D V+LW L S++ P V F G Y AS D
Sbjct: 525 FSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQ--PVWDVKFSPLGHYFVTASHD-- 580
Query: 466 VYQVASVKADWNCIKTFP--DLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGL-PGN 520
Q A + W +P +G CV+F P++ Y+ GS D+ R++ + GN
Sbjct: 581 --QTARL---WATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGN 634
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 203 (76.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 67/259 (25%), Positives = 111/259 (42%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED-GNYDCKHTLKDHTAEVQAV 316
+ LSGH +V KF G + D+ + +W D NY TLK H+ V +
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYA---TLKGHSGAVMEL 105
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ +AS D T C +D +G + ++ G A P + TG+
Sbjct: 106 HYNTDGSLLFSASTDKTVCVWDSETGERVKRLK--GHTSFVNSCFPARRGPQ--LACTGS 161
Query: 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435
+ VK+WD++ +A+V F + V +++F++ + + D +K+WDLR+ K S
Sbjct: 162 DDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYS 220
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC 493
+ S+ D GSYL S D +RV+ + C+K F +
Sbjct: 221 MQGHGDSVTGLSLSAD--GSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNL 278
Query: 494 VK--FGPDAKYIAVGSMDR 510
++ + D IA GS DR
Sbjct: 279 LRCSWSADGSKIAAGSADR 297
Score = 187 (70.9 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 75/292 (25%), Positives = 126/292 (43%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
H + +A+ G D ++++ + TL GHS V + + T+G L + S DKTV
Sbjct: 65 HPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVC 124
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAV-TVHATNKYFVTASLDNTWCFYDLSSGICLTQVS 349
VW SE G K LK HT+ V + + T S D T +D+ + +
Sbjct: 125 VWD-SETGER-VKR-LKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIR------KKA 175
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE 409
T S F+ + +G + +K+WD++ + GH +VT +S S
Sbjct: 176 SVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSA 235
Query: 410 NGYYLATAAHDG-VKLWDLR----KLKNFRSFESSDSETPTNSV--DFDHSGSYLAVASA 462
+G YL + + D V++WD+R K + + F+ + N + + GS +A SA
Sbjct: 236 DGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSA 295
Query: 463 DIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRV 514
D VY + + P +G+ V F P+ + GS D+ L +
Sbjct: 296 DRFVYIWDTTTR--RIVYKLPGHAGSVNE--VAFHPEEPIVLSGSSDKRLYI 343
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 60/251 (23%), Positives = 110/251 (43%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEG-DLFLTGSA 285
+++HY+ D ++ + D ++D +G+ V L GH+ V S G L TGS
Sbjct: 103 MELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSD 162
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D TV++W + + HT ++ T +V +VT + T+ ++ +DN +DL +
Sbjct: 163 DGTVKLWDIRKKASV---HTFQN-TYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLI 218
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN----VAKFDGHVGA 401
+ G + T + DG L + + + V++WD++ A V F G+V
Sbjct: 219 YSMQ-----GHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHN 273
Query: 402 ----VTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456
+ S+S +G +A + D V +WD + ++ N V F
Sbjct: 274 FEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIV--YKLPGHAGSVNEVAFHPEEPI 331
Query: 457 LAVASADIRVY 467
+ S+D R+Y
Sbjct: 332 VLSGSSDKRLY 342
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 51/217 (23%), Positives = 93/217 (42%)
Query: 306 LKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAF 365
L H EV H ++ D +++ G C + G G +
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGHSG---AVMELHY 107
Query: 366 HPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLA-TAAHDG-VK 423
+ DG +L + +++ V +WD ++ V + GH V + + G LA T + DG VK
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVK 167
Query: 424 LWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKT 481
LWD+RK + +F+++ SV F+ + + D I+V+ + K ++
Sbjct: 168 LWDIRKKASVHTFQNTYQVL---SVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYS---- 220
Query: 482 FPDLSGTGKA-TCVKFGPDAKYIAVGSMDRNLRVFGL 517
+ G G + T + D Y+ SMD ++RV+ +
Sbjct: 221 ---MQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDI 254
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 79/299 (26%), Positives = 130/299 (43%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ +LD + ++ATG D A ++ +G++++TLS H + S+K+ +GD LTGS
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGDYLLTGSV 385
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+T VW + + K + H+ V N F T+S D+ Y G
Sbjct: 386 DRTAVVWDVKAE---EWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSM--IYLCKIGETR 439
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
+ G G + P G +L + + ++ KIW++K V H + I
Sbjct: 440 PAKTFTGHQGE---VNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTI 496
Query: 406 SFSENG---------YYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+S G LA+A+ D VKLWD K SF P S+ F +G
Sbjct: 497 RWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGH--REPVYSLAFSPNGE 554
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRV 514
Y+A S D ++ + S+K + +KT+ +G G V + + IA D ++ V
Sbjct: 555 YIASGSLDKSIH-IWSIK-EGKIVKTY---TGNGGIFEVCWNKEGNKIAACFADNSVCV 608
Score = 157 (60.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 54/212 (25%), Positives = 92/212 (43%)
Query: 228 SLDIHYSKDV-IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+LD+ + +V AT D+ L + T +GH +V VK+ G L + S D
Sbjct: 410 TLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDD 469
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHAT-------NKYFV--TASLDNTWCFY 337
T ++W + H L++HT E+ + T NK +AS D+T +
Sbjct: 470 STAKIWNIKQS---TFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLW 526
Query: 338 DLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG 397
D G L + G E S AF P+G + +G+ + + IW +K V + G
Sbjct: 527 DAELGKMLCSFN-----GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTG 581
Query: 398 HVGAVTAISFSENGYYLATA-AHDGVKLWDLR 428
+ G + + +++ G +A A + V + D R
Sbjct: 582 N-GGIFEVCWNKEGNKIAACFADNSVCVLDFR 612
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 62/286 (21%), Positives = 119/286 (41%)
Query: 242 GVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYD 301
G + NA++ G+ + SK VT++ + EG L TGS D R+W N +
Sbjct: 305 GRNINALILKHAKGKS----NEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL----NGE 356
Query: 302 CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYT 361
TL H + ++ + Y +T S+D T +D+ + Q G T
Sbjct: 357 LISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHS------GPT 410
Query: 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG 421
+ + T ++++++ + + F GH G V + + G LA+ + D
Sbjct: 411 LDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDS 470
Query: 422 V-KLWDLRKLKNFRSFESSDSE------TPTNSVDFDHSGSYLAVASADIRVYQVASVKA 474
K+W++++ E +PT ++ L +ASA ++VK
Sbjct: 471 TAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGP-GTNNPNKQLTLASASFD----STVKL 525
Query: 475 DWNCI--KTFPDLSGTGKAT-CVKFGPDAKYIAVGSMDRNLRVFGL 517
W+ K +G + + F P+ +YIA GS+D+++ ++ +
Sbjct: 526 -WDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSI 570
Score = 149 (57.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 64/256 (25%), Positives = 108/256 (42%)
Query: 218 LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEG 277
L K P I SL + D + TG VD AV++D + + HS V +
Sbjct: 361 LSKHKGP-IFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNV 419
Query: 278 DLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFY 337
F T S D + + + E K T H EV V T + S D+T +
Sbjct: 420 S-FATSSTDSMIYLCKIGE--TRPAK-TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Query: 338 DLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---------LILGTGTSEALVKIWDVKS 388
++ T V D + E YT + P G L L + + ++ VK+WD +
Sbjct: 476 NIKQS---TFVHDL-REHTKEIYT-IRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAEL 530
Query: 389 QANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNS 447
+ F+GH V +++FS NG Y+A+ + D + +W +++ K +++ +
Sbjct: 531 GKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGG---IFE 587
Query: 448 VDFDHSGSYLAVASAD 463
V ++ G+ +A AD
Sbjct: 588 VCWNKEGNKIAACFAD 603
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 56/237 (23%), Positives = 101/237 (42%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
D++ T T+ + P+ V L GH+ +V + + L +GS D T R+W
Sbjct: 241 DIVMTPTSQTSHI----PNSD-VRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIP 295
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATN-KYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
E G++ HT ++ A + +N K +LD L++G C Q +
Sbjct: 296 E-GSFKAVHTGRNINALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLN 354
Query: 355 G-------RPEG-YTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
G + +G S ++ G L TG+ + +WDVK++ +F+ H G +
Sbjct: 355 GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVD 414
Query: 407 FSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
+ N + ++ + L + + + ++F E N V +D +GS LA S D
Sbjct: 415 WRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEV--NCVKWDPTGSLLASCSDD 469
>CGD|CAL0004633 [details] [associations]
symbol:orf19.7343 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 184 (69.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 41/132 (31%), Positives = 63/132 (47%)
Query: 309 HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAF--- 365
H + H N ++ S D TW +DL+ Q D EG++ F
Sbjct: 220 HNDRITKTLFHPINNLIISTSFDQTWKLWDLNK--LSGQRDDLQCLVEQEGHSKPIFTGE 277
Query: 366 -HPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVK 423
HPDG + +G + +V IWD++S ++ H+ V + +S NGY T + D +K
Sbjct: 278 IHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDCSLK 337
Query: 424 LWDLRKLKNFRS 435
+WDLRKL+N S
Sbjct: 338 IWDLRKLENNNS 349
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 47/205 (22%), Positives = 86/205 (41%)
Query: 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
SKP I + +IH + +GG+D ++D SG+ + TL H V + + G F+
Sbjct: 270 SKP-IFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFV 328
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
TGS D ++++W D + L+++ + + ++ A K FY S
Sbjct: 329 TGSGDCSLKIW--------DLRK-LENNNSNNELYSIPAHTKLITDVK------FYHQSR 373
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
I Q + + F+ DG L + + + V IW + + GH
Sbjct: 374 DIMQKQQQQQDQQQDQDHLLGSEFN-DGKFLVSCSYDGDVNIWSSDNWIKIKSLRGHTDK 432
Query: 402 VTAISFSENGYYLATAAHD-GVKLW 425
V + + G ++ ++ D +KLW
Sbjct: 433 VMSCDINSTGKWIVSSGWDRSIKLW 457
Score = 117 (46.2 bits), Expect = 0.00097, P = 0.00097
Identities = 36/152 (23%), Positives = 65/152 (42%)
Query: 244 DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE-DGNYD- 301
D N +L P IV+ H+ ++T F +L ++ S D+T ++W ++ G D
Sbjct: 203 DQNGLLLSSP---IVSIKQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDD 259
Query: 302 --CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEG 359
C + H+ + +H F++ LD +DL SG + + G
Sbjct: 260 LQCLVEQEGHSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQK-----HMAG 314
Query: 360 YTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+ P+G TG+ + +KIWD++ N
Sbjct: 315 VYCLDWSPNGYQFVTGSGDCSLKIWDLRKLEN 346
Score = 67 (28.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 22/95 (23%), Positives = 45/95 (47%)
Query: 207 LERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT-TLSG-H 264
L +Y S + T++ I ++ I + IA G D + L + I T SG H
Sbjct: 96 LSKYEIYGSQFIPGTTRT-ISNIKISNNDKYIACGSWDGSINLLNSQDLSIFKKTPSGFH 154
Query: 265 SKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGN 299
++K++ + + + ++G + T+ +W +E+ N
Sbjct: 155 NEKISGLSWNNNDNQLVSGGNEGTINIWNVNENNN 189
>UNIPROTKB|Q5A3W6 [details] [associations]
symbol:PRP4 "Potential spliceosomal U4/U6 snRNP protein
Prp4p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 184 (69.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 41/132 (31%), Positives = 63/132 (47%)
Query: 309 HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAF--- 365
H + H N ++ S D TW +DL+ Q D EG++ F
Sbjct: 220 HNDRITKTLFHPINNLIISTSFDQTWKLWDLNK--LSGQRDDLQCLVEQEGHSKPIFTGE 277
Query: 366 -HPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVK 423
HPDG + +G + +V IWD++S ++ H+ V + +S NGY T + D +K
Sbjct: 278 IHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDCSLK 337
Query: 424 LWDLRKLKNFRS 435
+WDLRKL+N S
Sbjct: 338 IWDLRKLENNNS 349
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 47/205 (22%), Positives = 86/205 (41%)
Query: 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
SKP I + +IH + +GG+D ++D SG+ + TL H V + + G F+
Sbjct: 270 SKP-IFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFV 328
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
TGS D ++++W D + L+++ + + ++ A K FY S
Sbjct: 329 TGSGDCSLKIW--------DLRK-LENNNSNNELYSIPAHTKLITDVK------FYHQSR 373
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
I Q + + F+ DG L + + + V IW + + GH
Sbjct: 374 DIMQKQQQQQDQQQDQDHLLGSEFN-DGKFLVSCSYDGDVNIWSSDNWIKIKSLRGHTDK 432
Query: 402 VTAISFSENGYYLATAAHD-GVKLW 425
V + + G ++ ++ D +KLW
Sbjct: 433 VMSCDINSTGKWIVSSGWDRSIKLW 457
Score = 117 (46.2 bits), Expect = 0.00097, P = 0.00097
Identities = 36/152 (23%), Positives = 65/152 (42%)
Query: 244 DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE-DGNYD- 301
D N +L P IV+ H+ ++T F +L ++ S D+T ++W ++ G D
Sbjct: 203 DQNGLLLSSP---IVSIKQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDD 259
Query: 302 --CKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEG 359
C + H+ + +H F++ LD +DL SG + + G
Sbjct: 260 LQCLVEQEGHSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQK-----HMAG 314
Query: 360 YTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+ P+G TG+ + +KIWD++ N
Sbjct: 315 VYCLDWSPNGYQFVTGSGDCSLKIWDLRKLEN 346
Score = 67 (28.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 22/95 (23%), Positives = 45/95 (47%)
Query: 207 LERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVT-TLSG-H 264
L +Y S + T++ I ++ I + IA G D + L + I T SG H
Sbjct: 96 LSKYEIYGSQFIPGTTRT-ISNIKISNNDKYIACGSWDGSINLLNSQDLSIFKKTPSGFH 154
Query: 265 SKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGN 299
++K++ + + + ++G + T+ +W +E+ N
Sbjct: 155 NEKISGLSWNNNDNQLVSGGNEGTINIWNVNENNN 189
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 208 (78.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 67/258 (25%), Positives = 113/258 (43%)
Query: 256 QIVTTLSGHSKKVTSVKFVT-EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQ 314
++V T SGH+K V++++F +G L L+ D V++W G C T H V+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGK--CMRTYMGHAKAVR 330
Query: 315 AVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LI 371
+ F+TA D ++D +G QV + G+ Y +PD I
Sbjct: 331 DICFSNDGSKFLTAGYDKNIKYWDTETG----QVISTFSTGKIP-YV-VKLNPDDDKQNI 384
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKL 430
L G S+ + WD+ + ++D H+GAV I+F +N T++ D +++W+ +
Sbjct: 385 LLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG-I 443
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGT 488
+ S S+ +G++LA S D I +Y + N K F
Sbjct: 444 PVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVA 502
Query: 489 GKATCVKFGPDAKYIAVG 506
G A V F PD +++ G
Sbjct: 503 GYACQVNFSPDGRFVMSG 520
Score = 155 (59.6 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 57/212 (26%), Positives = 83/212 (39%)
Query: 221 TSK-PGIVSLDIHYSKDVIATGGV-DTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGD 278
T K P +V L+ K I G+ D V +D +G++ H V ++ FV
Sbjct: 366 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNR 425
Query: 279 LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYD 338
F+T S DK++RVW+ K+ + H + +++VH + SLDN Y
Sbjct: 426 RFVTSSDDKSLRVWEFGIP--VVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYS 483
Query: 339 LSSGICLTQVSD-AGTDGRPEGYTSAA-FHPDGLILGTGTSEALVKIWDVKSQANVAKFD 396
L + AG GY F PDG + +G E WD KS
Sbjct: 484 TRERFQLNKKKRFAGHI--VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 541
Query: 397 GHVGAVTAISFSE-NGYYLATAAHDG-VKLWD 426
H G + +AT DG +K WD
Sbjct: 542 CHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>UNIPROTKB|E1BL00 [details] [associations]
symbol:PWP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 EMBL:DAAA02003485 IPI:IPI00686265
RefSeq:XP_002685190.1 RefSeq:XP_592170.3 ProteinModelPortal:E1BL00
Ensembl:ENSBTAT00000009343 GeneID:514336 KEGG:bta:514336
NextBio:20871282 Uniprot:E1BL00
Length = 919
Score = 211 (79.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 100/394 (25%), Positives = 165/394 (41%)
Query: 81 DGLMLSNF-ALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPA 139
D ++ F A L+T Q+ + ++Q D + RLK LL + E Q
Sbjct: 189 DAIVACFFEASSLDLYTLSQDGALCVWQCDTLPEGL-RLKAPTGWKADLLQREEEQ---E 244
Query: 140 ESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCN--AALSQQRKKRQV 197
E S + GK P E+ GK ++ + + D N A + +K +
Sbjct: 245 EEEGAESETTI-RGKATPAAEE--QQGKVKYSRVAKYFFNKEGDFNNLTAAAYHKKVHLL 301
Query: 198 PPALAP-IDALERYTQL-ASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVL-FDRPS 254
A I L + H L S + S+ I+ S D IA G +L ++ S
Sbjct: 302 VTGFASGIFHLHELPEFNLIHSL-SISDQRVASVAINSSGDWIAFGCSGLGQLLVWEWQS 360
Query: 255 GQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQ 314
V GH + S+ + +G +TG D V+VW S G C T +H++ V
Sbjct: 361 ESYVLKQQGHFNSMVSLAYSPDGQYIVTGGDDGKVKVWN-SLSGF--CFVTFTEHSSGVT 417
Query: 315 AVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGT 374
VT T VT+S+D T +DL + T RP ++ A G I+
Sbjct: 418 GVTFTTTGYVIVTSSMDGTVRAFDLHR----YRNFRTFTSPRPTQFSCVAVDSSGEIVSA 473
Query: 375 GTSEAL-VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKN 432
G ++ V IW +++ + GH G ++ + F+ LA+A+ D V LWD+ +
Sbjct: 474 GAQDSFEVFIWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDRTVHLWDMAD--S 531
Query: 433 FRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
+R+ E+ + +V F G+ LAVA+ + ++
Sbjct: 532 WRTTETLALTSDALAVTFRPDGAELAVATLNSQI 565
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 63/259 (24%), Positives = 113/259 (43%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
G +T+ + + L +TG A + + E ++ H+L V +V ++++
Sbjct: 284 GDFNNLTAAAYHKKVHLLVTGFASGIFHLHELPE---FNLIHSLSISDQRVASVAINSSG 340
Query: 323 KY--FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ F + L + S L Q G S A+ PDG + TG +
Sbjct: 341 DWIAFGCSGLGQLLVWEWQSESYVLKQ------QGHFNSMVSLAYSPDGQYIVTGGDDGK 394
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
VK+W+ S F H VT ++F+ GY + T++ DG V+ +DL + +NFR+F +S
Sbjct: 395 VKVWNSLSGFCFVTFTEHSSGVTGVTFTTTGYVIVTSSMDGTVRAFDLHRYRNFRTF-TS 453
Query: 440 DSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGP 498
T + V D SG ++ + D + S++ + LSG G + + F P
Sbjct: 454 PRPTQFSCVAVDSSGEIVSAGAQDSFEVFIWSMQTG----RLLDVLSGHEGPISGLCFNP 509
Query: 499 DAKYIAVGSMDRNLRVFGL 517
+A S DR + ++ +
Sbjct: 510 MKSVLASASWDRTVHLWDM 528
Score = 145 (56.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 55/226 (24%), Positives = 92/226 (40%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+ + YS D I TGG D +++ SG T + HS VT V F T G + +T S D
Sbjct: 375 VSLAYSPDGQYIVTGGDDGKVKVWNSLSGFCFVTFTEHSSGVTGVTFTTTGYVIVTSSMD 434
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCF-YDLSSGICL 345
TVR + N+ + + V V ++ + + D+ F + + +G L
Sbjct: 435 GTVRAFDLHRYRNF--RTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEVFIWSMQTGRLL 492
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
+S G +G G F+P +L + + + V +WD+ + A+
Sbjct: 493 DVLS--GHEGPISGL---CFNPMKSVLASASWDRTVHLWDMADSWRTTETLALTSDALAV 547
Query: 406 SFSENGYYLATAA-HDGVKLWDLRKLKNFRSFESS-DSETPTNSVD 449
+F +G LA A + + WD S E D +T +D
Sbjct: 548 TFRPDGAELAVATLNSQITFWDPENAVQTGSIEGRHDLKTGRKELD 593
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 208 (78.3 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 65/226 (28%), Positives = 106/226 (46%)
Query: 251 DRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHT 310
D +G + L GH V S +F+ + L+ S D ++R W + G++ + H
Sbjct: 346 DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW---DLGSFTNTVLYQGHA 402
Query: 311 AEVQAVTVHATNKYFVTASLDNT---WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP 367
V + + + YF + S D T W F D + + + A D FHP
Sbjct: 403 YPVWDLDISPYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVD-------CVKFHP 454
Query: 368 DGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWD 426
+ L TG+++ V++W + +V F GH G V +++FS NG YLA+A D +KLWD
Sbjct: 455 NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 514
Query: 427 LRKLKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
L ++ +D+ T S+ F S +A AS D +RV+ +
Sbjct: 515 LASGTLYKELRGHTDNIT---SLTFSPDSSLIASASMDNSVRVWDI 557
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 52/200 (26%), Positives = 83/200 (41%)
Query: 209 RYTQLASHP---LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHS 265
RY L S L++ + LDI A+G D A L+ + +GH
Sbjct: 385 RYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHL 444
Query: 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYF 325
V VKF + TGS DKTVR+W ++ GN H V ++ KY
Sbjct: 445 ADVDCVKFHPNSNYLATGSTDKTVRLWS-AQQGN--SVRLFTGHRGPVLSLAFSPNGKYL 501
Query: 326 VTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWD 385
+A D +DL+SG ++ G + TS F PD ++ + + + V++WD
Sbjct: 502 ASAGEDQRLKLWDLASGTLYKELR-----GHTDNITSLTFSPDSSLIASASMDNSVRVWD 556
Query: 386 VKSQANVAKFDGHVGAVTAI 405
+++ DG G + +
Sbjct: 557 IRNTYCSTPADGSSGELVGV 576
Score = 160 (61.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 58/230 (25%), Positives = 98/230 (42%)
Query: 293 QGSEDGNYDCK-HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
+ ED N + L+ H V + A + ++ S D + ++DL S T
Sbjct: 342 EDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS---FTNT--V 396
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411
G P L +G+ + ++W + + GH+ V + F N
Sbjct: 397 LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 456
Query: 412 YYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQ 468
YLAT + D V+LW ++ + R F + P S+ F +G YLA A D ++++
Sbjct: 457 NYLATGSTDKTVRLWSAQQGNSVRLF--TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 514
Query: 469 VASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+AS + +L G T T + F PD+ IA SMD ++RV+ +
Sbjct: 515 LASGTL-------YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 557
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 200 (75.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 71/256 (27%), Positives = 116/256 (45%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
D+ S D +G D L+D +G GH+K V SV F + ++GS DK
Sbjct: 68 DVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDK 127
Query: 288 TVRVWQGSEDGNYDCKHTLKD--HTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
T+++W G CK+T++D HT V V + +++N V+ D ++L++
Sbjct: 128 TIKLWNTL--GV--CKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLAN-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD-GHVGAV 402
C + + G G T + PDG + +G + +WD+ ++ D G V +
Sbjct: 182 CKLKTNHIGHTGYLNTVTVS---PDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDV--I 236
Query: 403 TAISFSENGYYLATAAHDGVKLWDLR------KLKNFRSFESSDSETPT-NSVDFDHSGS 455
A+ FS N Y+L A +K+WDL +L+ +S +E P S+ + G
Sbjct: 237 NALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQ 296
Query: 456 YLAVASAD--IRVYQV 469
L D IRV+QV
Sbjct: 297 TLFAGYTDNLIRVWQV 312
Score = 185 (70.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 64/265 (24%), Positives = 120/265 (45%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
+L GHS V+ V ++G L+G+ D T+R+W + HT +V +V
Sbjct: 58 SLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLT---TRRFVGHTKDVLSVAFS 114
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGT 376
A N+ V+ S D T ++ + G+C + D +G E + F P+ +I+ G
Sbjct: 115 ADNRQIVSGSRDKTIKLWN-TLGVCKYTIQD---EGHTEWVSCVRFSPNSSNPIIVSCGW 170
Query: 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRS 435
+ +VK+W++ + GH G + ++ S +G A+ DG LWDL + K+ +
Sbjct: 171 DK-MVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 229
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASA-DIRVYQV-ASVKAD---WNCIKTFPDLSGTGK 490
+S D N++ F + +L A+ I+++ + + D I T + +
Sbjct: 230 LDSGDV---INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVIST-NSKAEPPQ 285
Query: 491 ATCVKFGPDAKYIAVGSMDRNLRVF 515
T + + D + + G D +RV+
Sbjct: 286 CTSLAWSADGQTLFAGYTDNLIRVW 310
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 260 TLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GHS VT + + D+ L+ S DK++ +W+ + D NY + +LK H+ V V
Sbjct: 10 TLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDV 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + ++ ++ + D T +DL++G+ + G + S AF D + +G+
Sbjct: 70 VISSDGQFALSGAWDGTLRLWDLTTGLTTRRFV-----GHTKDVLSVAFSADNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLRKLK 431
+ +K+W+ D GH V+ + FS N + + D VK+W+L K
Sbjct: 125 RDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCK 183
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 47/221 (21%), Positives = 89/221 (40%)
Query: 305 TLKDHTAEVQAVTVHATNKY---FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYT 361
TLK H+ V + T KY ++AS D + + L+ + G +
Sbjct: 10 TLKGHSGWVTQIAT--TPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVS 67
Query: 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG 421
DG +G + +++WD+ + +F GH V +++FS + + + + D
Sbjct: 68 DVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDK 127
Query: 422 -VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD----IRVYQVASVKADW 476
+KLW+ + + + +E + V F + S + S ++V+ +A+ K
Sbjct: 128 TIKLWNTLGVCKYTIQDEGHTEW-VSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCK--- 183
Query: 477 NCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+KT + TG V PD A G D ++ L
Sbjct: 184 --LKT-NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 204 (76.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 67/264 (25%), Positives = 116/264 (43%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
+ LSGH +V KF G + D+ + +W + G+ D TLK H+ V +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELH 116
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ +AS D T +D +G + ++ G A P ++ TG+
Sbjct: 117 YNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRGPQ--LVCTGSD 172
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK-NFRS 435
+ VK+WD++ +A + F + V A++F++ + + D +K+WDLR+ K +
Sbjct: 173 DGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC 493
+DS T + GSYL + D +RV+ V C+K F +
Sbjct: 232 RGHADSVT---GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 288
Query: 494 VK--FGPDAKYIAVGSMDRNLRVF 515
++ + PD IA GS DR + V+
Sbjct: 289 LRCSWSPDGSKIAAGSADRFVYVW 312
Score = 180 (68.4 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 76/285 (26%), Positives = 116/285 (40%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
H + +A+ G D +L++ TL GHS V + + T+G + + S DKTV
Sbjct: 75 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 134
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV-TASLDNTWCFYDLSSGICLTQVS 349
VW SE G K LK HT+ V + V T S D T +D+ +
Sbjct: 135 VWD-SETGER-VKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 191
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE 409
+ + F+ + +G + +K+WD++ GH +VT +S S
Sbjct: 192 NTYQ------VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 245
Query: 410 NGYYLATAAHDG-VKLWDLR----KLKNFRSFESSDSETPTNSV--DFDHSGSYLAVASA 462
G YL + A D V++WD+R K + + F+ + N + + GS +A SA
Sbjct: 246 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 305
Query: 463 DIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVG 506
D VY D + L G G V F PD I G
Sbjct: 306 DRFVYVW-----DTTSRRILYKLPGHAGSINEVAFHPDEPIIETG 345
Score = 156 (60.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 38/187 (20%), Positives = 84/187 (44%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ TG D L+D + T ++ +V +V F D ++G D ++VW +
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGI----CLTQVSDAG 352
+ +T++ H V +++ + Y ++ ++DNT +D+ C+ ++
Sbjct: 225 N---KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV-KIFQGN 280
Query: 353 TDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGY 412
+ ++ PDG + G+++ V +WD S+ + K GH G++ ++F +
Sbjct: 281 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP 340
Query: 413 YLATAAH 419
+ T H
Sbjct: 341 IIETGFH 347
Score = 145 (56.1 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 55/210 (26%), Positives = 94/210 (44%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEG-DLFLTGSA 285
+++HY+ D ++ + D ++D +G+ V L GH+ V S G L TGS
Sbjct: 113 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 172
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D TV++W + T ++ T +V AVT + T+ ++ +DN +DL L
Sbjct: 173 DGTVKLWDIRKKAAIQ---TFQN-TYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-L 227
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN----VAKFDGHVGA 401
T G + T + +G L + + V++WDV+ A V F G+V
Sbjct: 228 TYTMR----GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 402 ----VTAISFSENGYYLATAAHDG-VKLWD 426
+ S+S +G +A + D V +WD
Sbjct: 284 FEKNLLRCSWSPDGSKIAAGSADRFVYVWD 313
Score = 117 (46.2 bits), Expect = 0.00081, P = 0.00081
Identities = 35/155 (22%), Positives = 65/155 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
++++ + + D I +GG+D + ++D ++ T+ GH+ VT + +EG L+ +
Sbjct: 196 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 255
Query: 286 DKTVRVWQGSEDGNYD-CKHTLKDHTAEVQAVTVHAT----NKYFVTASLDNTWCFYDLS 340
D TVRVW + C + + + + + S D +D +
Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT 315
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
S L ++ G AFHPD I+ TG
Sbjct: 316 SRRILYKLP-----GHAGSINEVAFHPDEPIIETG 345
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 200 (75.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 68/265 (25%), Positives = 114/265 (43%)
Query: 168 KLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQ--LASHPLHKTSKPG 225
+ HT + AI + + + +S R K + L D Q L H H
Sbjct: 12 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS-HFVEDV- 69
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
++S D ++ +G D L+D +G GH+K V SV F + ++ S
Sbjct: 70 VLSSDGQFA----LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR 125
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
D+T+++W + Y + H V V + + V+AS D T ++LS+
Sbjct: 126 DRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN-- 183
Query: 344 CLTQVSDAGTDGRPEGYTSA-AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAV 402
C + + AG G Y S A PDG + +G + +V +WD+ + + + +
Sbjct: 184 CKLRSTLAGHTG----YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVI 238
Query: 403 TAISFSENGYYLATAAHDGVKLWDL 427
A+ FS N Y+L A G+K+WDL
Sbjct: 239 HALCFSPNRYWLCAATEHGIKIWDL 263
Score = 193 (73.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 74/304 (24%), Positives = 136/304 (44%)
Query: 236 DVIATGGVDTNAVLF-----DRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
D+I + D + +L+ D+ G L+GHS V V ++G L+GS D +R
Sbjct: 29 DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 88
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
+W + + HT +V +V N+ V+AS D T ++ + G C +S+
Sbjct: 89 LWDLAAGVS---TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN-TLGECKYTISE 144
Query: 351 AGTDGRPEGYTSAAFHPDGL--ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS 408
G +G + + F P+ L + + + + VK+W++ + + GH G V+ ++ S
Sbjct: 145 GG-EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS 203
Query: 409 ENGYYLATAAHDGVKL-WDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-IRV 466
+G A+ DGV L WDL + K S E++ + +++ F + +L A+ I++
Sbjct: 204 PDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN---SVIHALCFSPNRYWLCAATEHGIKI 260
Query: 467 YQVAS------VKADWNCIKTFPDLSGTGKA-------TCVKFGPDAKYIAVGSMDRNLR 513
+ + S +K D D SG T + + D + G D +R
Sbjct: 261 WDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIR 320
Query: 514 VFGL 517
V+G+
Sbjct: 321 VWGI 324
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 49/212 (23%), Positives = 87/212 (41%)
Query: 303 KHTLKDHTAEVQAVTVHATNK-YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYT 361
K T++ HT V A+ N V+AS D + + L+ V+ G
Sbjct: 8 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVE 67
Query: 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG 421
DG +G+ + +++WD+ + + +F GH V +++FS + + +A+ D
Sbjct: 68 DVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR 127
Query: 422 -VKLWDLRKLKNFRSFESSDSETP-TNSVDFDHSGSYLAVASADI-RVYQVASVKADWNC 478
+KLW+ + E + + V F + + SA + +V ++ NC
Sbjct: 128 TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS---NC 184
Query: 479 IKTFPDLSG-TGKATCVKFGPDAKYIAVGSMD 509
K L+G TG + V PD A G D
Sbjct: 185 -KLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 215
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 198 (74.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 74/260 (28%), Positives = 116/260 (44%)
Query: 264 HSKKVTSVKFVTE----GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
H + SV + T + +TGS D V+VW+ ++ D + +L+ H V +V +
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDE-RLDLQWSLEGHQLGVVSVDIS 73
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
T ++SLD +DL +G + + DAG P + AF PD L TGT
Sbjct: 74 HTLPIAASSSLDAHIRLWDLDNGKQIKSI-DAG----PVDAWTLAFSPDSQYLATGTHVG 128
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFES 438
V I+ V+S D + +I++S +G YLA+ A DG+ ++D+ K + E
Sbjct: 129 KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
Query: 439 SDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC-VK 495
P S+ F L AS D I++Y V N T LSG V
Sbjct: 189 H--AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----NLAGT---LSGHASWVLNVA 239
Query: 496 FGPDAKYIAVGSMDRNLRVF 515
F PD + S D++++V+
Sbjct: 240 FCPDDTHFVSSSSDKSVKVW 259
Score = 181 (68.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 55/247 (22%), Positives = 116/247 (46%)
Query: 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
G+VS+DI ++ + A+ +D + L+D +G+ + ++ ++ F + TG+
Sbjct: 66 GVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGT 125
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
V ++ G E G + ++L + ++ KY + ++D +D+++G
Sbjct: 126 HVGKVNIF-GVESGKKE--YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVA-KFDGHVGAVT 403
L + +G S F PD +L T + + +KI+DV+ AN+A GH V
Sbjct: 183 LHTL-----EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGTLSGHASWVL 236
Query: 404 AISFS-ENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA 462
++F ++ +++++++ VK+WD+ +F D + V ++ +GS +
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF--FDHQDQVWGVKYNGNGSKIVSVGD 294
Query: 463 D--IRVY 467
D I VY
Sbjct: 295 DQEIHVY 301
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 60/263 (22%), Positives = 115/263 (43%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
+L GH V SV + + S D +R+W D K ++ + +
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD--LDNGKQIK-SIDAGPVDAWTLAFS 115
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEA 379
++Y T + + + SG + D R + S A+ PDG L +G +
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESG-----KKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 380 LVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES 438
++ I+D+ + + +GH + +++FS + L TA+ DG +K++D++ N S
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAGTLS 229
Query: 439 SDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKF 496
+ N V F ++ +S+D ++V+ V + C+ TF D + VK+
Sbjct: 230 GHASWVLN-VAFCPDDTHFVSSSSDKSVKVWDVGTR----TCVHTFFDHQD--QVWGVKY 282
Query: 497 -GPDAKYIAVGSMDRNLRVFGLP 518
G +K ++VG D+ + V+ P
Sbjct: 283 NGNGSKIVSVGD-DQEIHVYDCP 304
Score = 132 (51.5 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 36/123 (29%), Positives = 54/123 (43%)
Query: 216 HPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT 275
H L + P I SL ++ T D ++D + TLSGH+ V +V F
Sbjct: 184 HTLEGHAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP 242
Query: 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWC 335
+ F++ S+DK+V+VW + G C HT DH +V V + V+ D
Sbjct: 243 DDTHFVSSSSDKSVKVW---DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIH 299
Query: 336 FYD 338
YD
Sbjct: 300 VYD 302
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 206 (77.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 64/223 (28%), Positives = 101/223 (45%)
Query: 251 DRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHT 310
D +G + L GH V S +F+++ L+ S D ++R W N + H
Sbjct: 328 DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTN---TVLYQGHA 384
Query: 311 AEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGL 370
V + + + YF +AS D T + L + G FHP+
Sbjct: 385 YPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYA-----GHLLDVDCVKFHPNSN 439
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRK 429
L TG+++ V++W + +V F GH G V A++FS NG YLA+A D +KLWDL
Sbjct: 440 YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLAS 499
Query: 430 LKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
++ +D+ T S+ F S +A AS D +RV+ +
Sbjct: 500 GTLYKELRGHTDNIT---SLTFSPDSSLIASASMDNSVRVWDI 539
Score = 166 (63.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 49/181 (27%), Positives = 80/181 (44%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
GH+ V + F + S D+T R+W S D Y + H +V V H +
Sbjct: 382 GHAYPVWDLDISPCSLYFASASHDRTARLW--SFDRTYPLR-IYAGHLLDVDCVKFHPNS 438
Query: 323 KYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVK 382
Y T S D T + G + + G G P + AF P+G L + + +K
Sbjct: 439 NYLATGSTDKTVRLWSTQQGNSVRLFT--GHRG-P--VLALAFSPNGKYLASAGEDQRLK 493
Query: 383 IWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS 441
+WD+ S + GH +T+++FS + +A+A+ D V++WD+R + S S
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSS 553
Query: 442 E 442
E
Sbjct: 554 E 554
Score = 164 (62.8 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 47/169 (27%), Positives = 72/169 (42%)
Query: 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
LDI A+ D A L+ + +GH V VKF + TGS DKT
Sbjct: 390 LDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKT 449
Query: 289 VRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQV 348
VR+W ++ GN H V A+ KY +A D +DL+SG ++
Sbjct: 450 VRLWS-TQQGN--SVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 506
Query: 349 SDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG 397
G + TS F PD ++ + + + V++WD+++ A DG
Sbjct: 507 R-----GHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADG 550
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/165 (26%), Positives = 78/165 (47%)
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLW 425
P L + + + ++W + + GH+ V + F N YLAT + D V+LW
Sbjct: 394 PCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLW 453
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFP 483
++ + R F + P ++ F +G YLA A D ++++ +AS +
Sbjct: 454 STQQGNSVRLF--TGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTL-------YK 504
Query: 484 DLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN--DAPSE 525
+L G T T + F PD+ IA SMD ++RV+ + +AP++
Sbjct: 505 ELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPAD 549
Score = 116 (45.9 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 397 GHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
GH G V + F + L + + D ++ WDLR N ++ P +D
Sbjct: 340 GHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGH--AYPVWDLDISPCSL 397
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGK---ATCVKFGPDAKYIAVGSMDRNL 512
Y A AS D + A + W+ +T+P G CVKF P++ Y+A GS D+ +
Sbjct: 398 YFASASHD----RTARL---WSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTV 450
Query: 513 RVFGLP-GN 520
R++ GN
Sbjct: 451 RLWSTQQGN 459
Score = 51 (23.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 362 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
+A P+ +L G + VK+W ++S+ K + H+ V+ I
Sbjct: 273 TAEISPNSKLLAAGFDNSCVKLWSLRSKK--LKSEPHLVDVSRI 314
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 202 (76.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 54/215 (25%), Positives = 98/215 (45%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ + + +K IAT D ++ + ++ TL GH + ++ VK+ T + S
Sbjct: 57 VTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASD 116
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
DKT+R+W + + C LK HT V ++ + V+ S D T ++L G CL
Sbjct: 117 DKTIRIWDFEKRCSVRC---LKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCL 173
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA-VTA 404
+ E S + DG + T + + + +IWDV S + + ++
Sbjct: 174 RMLP-----AHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSN 228
Query: 405 ISFSENGYYLATA-AHDGVKLWDLRKLKNFRSFES 438
+ F+EN YL + + ++LWD R+ + R F+S
Sbjct: 229 LQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDS 263
Score = 182 (69.1 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K VT V T S+D T+++W +C TL H + V
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTF-RLEC--TLFGHYRGISQVKWA 105
Query: 320 ATNKYFVTASLDNT---WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+KY +AS D T W F S CL G +S F+P G +L +G+
Sbjct: 106 TGSKYLASASDDKTIRIWDFEKRCSVRCLK--------GHTNYVSSIDFNPLGTLLVSGS 157
Query: 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRS 435
+ V+IW+++ + H + ++S S +G ATA++DG+ ++WD+ + ++
Sbjct: 158 WDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKT 217
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASADIRV 466
+ P +++ F + YL V++ + ++
Sbjct: 218 LVEPIN-VPLSNLQFTENRKYLLVSNLNSQI 247
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 62/227 (27%), Positives = 99/227 (43%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+A+ D ++D V L GH+ V+S+ F G L ++GS D+TVR+W +D
Sbjct: 111 LASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWN-LQD 169
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL-TQVSDAGTDGR 356
G C L H+ + +V++ A TAS D +D+ SG CL T V
Sbjct: 170 GT--CLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINV--- 224
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
P ++ F + L + +++WD + V FD HV T S S + Y
Sbjct: 225 P--LSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVN--TRYSMSWDCY---- 276
Query: 417 AAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
+ + KN + ++DS P ++ F H +YL + S D
Sbjct: 277 -SSKNIP-------KNTEALPNNDSSYPDDAESFMHD-AYLLIPSED 314
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 55/232 (23%), Positives = 102/232 (43%)
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLT 346
K +R ++ + C TL H V V+V ++ T+S D T + LT
Sbjct: 33 KRIRNYESHSGFSEYC--TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWS-----ALT 85
Query: 347 QVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAIS 406
+ G G + + L + + + ++IWD + + +V GH V++I
Sbjct: 86 FRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSID 145
Query: 407 FSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD-- 463
F+ G L + + D V++W+L+ R + SE P SV G+ A AS D
Sbjct: 146 FNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAH-SE-PIISVSISADGTLCATASYDGM 203
Query: 464 IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
R++ V S + C+KT + + ++F + KY+ V +++ +R++
Sbjct: 204 ARIWDVLSGQ----CLKTLVEPINVPLSN-LQFTENRKYLLVSNLNSQIRLW 250
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 201 (75.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 66/264 (25%), Positives = 116/264 (43%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
+ LSGH +V KF G + D+ + +W + G+ D TLK H+ V +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELH 117
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ +AS D T +D +G + ++ G A P ++ TG+
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRGPQ--LVCTGSD 173
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK-NFRS 435
+ VK+WD++ +A + F + V A++F++ + + D +K+WDLR+ K +
Sbjct: 174 DGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC 493
+DS T + GSYL + D +RV+ V C++ F +
Sbjct: 233 RGHADSVT---GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNL 289
Query: 494 VK--FGPDAKYIAVGSMDRNLRVF 515
++ + PD IA GS DR + V+
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVW 313
Score = 190 (71.9 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 79/291 (27%), Positives = 119/291 (40%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
H + +A+ G D +L++ TL GHS V + + T+G + + S DKTV
Sbjct: 76 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV-TASLDNTWCFYDLSSGICLTQVS 349
VW SE G K LK HT+ V + V T S D T +D+ +
Sbjct: 136 VWD-SETGER-VKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 192
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE 409
+ + F+ + +G + +K+WD++ GH +VT +S S
Sbjct: 193 NTYQ------VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 410 NGYYLATAAHDG-VKLWDLR----KLKNFRSFESSDSETPTNSV--DFDHSGSYLAVASA 462
G YL + A D V++WD+R K + R F+ + N + + GS +A SA
Sbjct: 247 EGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 463 DIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNL 512
D VY D + L G G V F PD I S D+ L
Sbjct: 307 DRFVYVW-----DTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 63/251 (25%), Positives = 108/251 (43%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEG-DLFLTGSA 285
+++HY+ D ++ + D ++D +G+ V L GH+ V S G L TGS
Sbjct: 114 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 173
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D TV++W + T ++ T +V AVT + T+ ++ +DN +DL L
Sbjct: 174 DGTVKLWDIRKKAAIQ---TFQN-TYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-L 228
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN----VAKFDGHVGA 401
T G + T + +G L + + V++WDV+ A V F G+V
Sbjct: 229 TYTMR----GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHN 284
Query: 402 ----VTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456
+ S+S +G +A + D V +WD + ++ N V F
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRIL--YKLPGHAGSINEVAFHPDEPI 342
Query: 457 LAVASADIRVY 467
+ AS+D R+Y
Sbjct: 343 ILSASSDKRLY 353
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 201 (75.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 66/258 (25%), Positives = 112/258 (43%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
+ LSGH +V KF G + D+ + +W S G+ D TLK H+ V +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLW--SVYGDCDNYATLKGHSGAVMELH 117
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ +AS D T +D +G + ++ G A P ++ TG+
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRGPQ--LVCTGSD 173
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK-NFRS 435
+ VK+WD++ +A + F + V A++F++ + + D +K+WDLR+ K +
Sbjct: 174 DGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC 493
+DS T + GSYL + D +RV+ V C+K F +
Sbjct: 233 RGHADSVT---GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Query: 494 VK--FGPDAKYIAVGSMD 509
++ + PD IA GS D
Sbjct: 290 LRCSWSPDGSKIAAGSAD 307
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSG-QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
H + +A+ G D +L+ TL GHS V + + T+G + + S DKTV
Sbjct: 76 HPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV-TASLDNTWCFYDLSSGICLTQVS 349
VW SE G K LK HT+ V + V T S D T +D+ +
Sbjct: 136 VWD-SETGER-VKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ 192
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE 409
+ + F+ + +G + +K+WD++ GH +VT +S S
Sbjct: 193 NTYQ------VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 410 NGYYLATAAHDG-VKLWDLR----KLKNFRSFESSDSETPTNSV--DFDHSGSYLAVASA 462
G YL + A D V++WD+R K + + F+ + N + + GS +A SA
Sbjct: 247 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 463 DIRVY 467
D +Y
Sbjct: 307 DSFLY 311
Score = 146 (56.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 61/251 (24%), Positives = 106/251 (42%)
Query: 229 LDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEG-DLFLTGSA 285
+++HY+ D ++ + D ++D +G+ V L GH+ V S G L TGS
Sbjct: 114 MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSD 173
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D TV++W + T ++ T +V AVT + T+ ++ +DN +DL L
Sbjct: 174 DGTVKLWDIRKKAAIQ---TFQN-TYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-L 228
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN----VAKFDGHVGA 401
T G + T + +G L + + V++WDV+ A V F G+V
Sbjct: 229 TYTMR----GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 402 ----VTAISFSENGYYLATAAHDGVKL-WDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456
+ S+S +G +A + D W +++ +SV G
Sbjct: 285 FEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDSVK-PQEGIX 343
Query: 457 LAVASADIRVY 467
+ AS+D R+Y
Sbjct: 344 ILSASSDKRLY 354
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 209 (78.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 53/193 (27%), Positives = 93/193 (48%)
Query: 234 SKDVIATGGVDTNAV-LFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVW 292
S++V+ G + + L+D ++V +GH ++V+F G+ +GS+D +RVW
Sbjct: 68 SEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVW 127
Query: 293 QGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAG 352
+ G C T K HT + + ++ V+ LDN +DL++G L +
Sbjct: 128 DTRKKG---CIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH- 183
Query: 353 TDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGY 412
+G P S FHP +L TG+++ VK WD+++ + V AI+F +G
Sbjct: 184 -EG-P--IRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQ 239
Query: 413 YLATAAHDGVKLW 425
L DG+K++
Sbjct: 240 TLFCGLDDGLKVY 252
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 69/243 (28%), Positives = 114/243 (46%)
Query: 279 LFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYD 338
L LTG D V +W G +L HT+ V +V ++ + + +D
Sbjct: 30 LLLTGGDDYKVNLWS---IGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWD 86
Query: 339 LSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGH 398
L +++ A T G ++ FHP G L +G+S+ +++WD + + + + GH
Sbjct: 87 LEE----SKMVRAFT-GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGH 141
Query: 399 VGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYL 457
++ I FS +G ++ + D V K+WDL K F+ E P S+DF L
Sbjct: 142 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH--EGPIRSLDFHPLEFLL 199
Query: 458 AVASADIRVYQVASVKADWNCIKTFPDLSGTGK--ATCVK---FGPDAKYIAVGSMDRNL 512
A SAD +VK W+ ++TF +L GT + AT V+ F PD + + G +D L
Sbjct: 200 ATGSAD------RTVKF-WD-LETF-ELIGTTRPEATGVRAIAFHPDGQTLFCG-LDDGL 249
Query: 513 RVF 515
+V+
Sbjct: 250 KVY 252
Score = 186 (70.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 59/234 (25%), Positives = 99/234 (42%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ TGG D L+ +L GH+ V SV F +E L L G++ +++W E
Sbjct: 30 LLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEE 89
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
H + AV H ++ + S D +D C+ G
Sbjct: 90 S---KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK-----GH 141
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT 416
G ++ F PDG + +G + +VK+WD+ + + +F H G + ++ F + LAT
Sbjct: 142 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT 201
Query: 417 AAHDG-VKLWDLRKLKNFRSFESSDSE-TPTNSVDFDHSGSYLAVASAD-IRVY 467
+ D VK WDL + F ++ E T ++ F G L D ++VY
Sbjct: 202 GSADRTVKFWDL---ETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVY 252
Score = 173 (66.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 59/222 (26%), Positives = 104/222 (46%)
Query: 228 SLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
+++ H + +A+G DTN ++D + T GH++ +++++F +G ++G D
Sbjct: 105 AVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDN 164
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
V+VW + G H K H ++++ H T S D T F+DL + +
Sbjct: 165 VVKVWDLTA-GKL--LHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELI-- 219
Query: 348 VSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDG-HVGAVTA 404
GT RPE G + AFHPDG L G + L K++ S V DG +G T
Sbjct: 220 ----GTT-RPEATGVRAIAFHPDGQTLFCGLDDGL-KVY---SWEPVICRDGVDMGWSTL 270
Query: 405 ISFSEN-GYYLATAAH-DGVKLW--DLRKLKNFRSFESSDSE 442
F N G ++ + + + V +W D+ +L+ + + +E
Sbjct: 271 GDFCINEGKFIGCSYYRNSVGIWVSDISELEPYGAVSEDKNE 312
Score = 160 (61.4 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 43/148 (29%), Positives = 76/148 (51%)
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF-SENGYYLATAAHDGVKLWDLRK 429
+L TG + V +W + + GH V +++F SE LA A+ +KLWDL +
Sbjct: 30 LLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEE 89
Query: 430 LKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTG 489
K R+F S ++V+F G +LA S+D + +V + CI+T+ + G
Sbjct: 90 SKMVRAFTGHRSNC--SAVEFHPFGEFLASGSSDTNL-RVWDTRKK-GCIQTYKGHT-RG 144
Query: 490 KATCVKFGPDAKYIAVGSMDRNLRVFGL 517
+T ++F PD +++ G +D ++V+ L
Sbjct: 145 IST-IEFSPDGRWVVSGGLDNVVKVWDL 171
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 207 (77.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 56/181 (30%), Positives = 89/181 (49%)
Query: 277 GDLFLTGSADKTVRVWQGSEDGNYDCKHTL---KDHTAEVQAVTVHATNKYFVTASLDNT 333
G +TGS D + R+W + + +H L HT +V+ V H Y T S D++
Sbjct: 551 GQYVVTGSKDLSARLW------SLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHS 604
Query: 334 ---WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
WC +SG + +D + T AF PDG +L E V+I+D+ + A
Sbjct: 605 VRLWC---ATSGKLMRVFADCR-----QAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGA 656
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNF--RSFESSDSETPTNS 447
+A+ H +++++S+S + +LATA DG ++LWD++KL S S S TN
Sbjct: 657 QLAELKDHSASISSLSWSTHNRHLATACSDGTLRLWDIKKLSPMSDNSSAGSSSSATTNR 716
Query: 448 V 448
V
Sbjct: 717 V 717
Score = 178 (67.7 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 56/212 (26%), Positives = 94/212 (44%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GH+K VT V+F L + S D T+R W+ N C + H + +
Sbjct: 493 LRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAH---NLHCAAIYRSHNYPIWCLDESP 549
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+Y VT S D + + L L + G + AFHP+G + TG+++
Sbjct: 550 VGQYVVTGSKDLSARLWSLEKEHALIIYA-----GHTQDVECVAFHPNGNYIATGSADHS 604
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
V++W S + F AVT ++FS +G LA A + V+++DL + E
Sbjct: 605 VRLWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAA--GAQLAELK 662
Query: 440 DSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
D +S+ + +LA A +D +R++ +
Sbjct: 663 DHSASISSLSWSTHNRHLATACSDGTLRLWDI 694
Score = 121 (47.7 bits), Expect = 0.00070, P = 0.00070
Identities = 36/150 (24%), Positives = 62/150 (41%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
+ TG D +A L+ + +GH++ V V F G+ TGSAD +VR+W +
Sbjct: 554 VVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCATS- 612
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
G D V + K A + +DL++G L ++ D
Sbjct: 613 GKL--MRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSAS--- 667
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVK 387
+S ++ L T S+ +++WD+K
Sbjct: 668 --ISSLSWSTHNRHLATACSDGTLRLWDIK 695
Score = 120 (47.3 bits), Expect = 0.00090, P = 0.00090
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 367 PDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLW 425
P G + TG+ + ++W ++ + + + GH V ++F NG Y+AT + D V+LW
Sbjct: 549 PVGQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLW 608
Query: 426 DLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471
K R F +D + F G LA A + +R++ +A+
Sbjct: 609 CATSGKLMRVF--ADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAA 654
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 206 (77.6 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 67/249 (26%), Positives = 113/249 (45%)
Query: 194 KRQVPPALAPIDALERYTQLASH--PLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFD 251
K+ +P + + D+ + +L SH P++ T+ S D Y + + D +A L+
Sbjct: 357 KKSLPKSTSVEDS-DGSVRLLSHSGPVYGTT----FSPDNKY----LLSCSEDASARLWS 407
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTA 311
+ + GH+ V V F G F T S D+T ++W S D Y + H +
Sbjct: 408 VDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLW--SCDHIYPLR-VFAGHLS 464
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+V VT H + Y +T S D T +D+ G + + G + T+ A PDG
Sbjct: 465 DVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFN-----GHTQPVTAVAIAPDGHT 519
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKL 430
+ + SE L+ +WD+ + + GH G + ++SFS L + D V+ WD+ K
Sbjct: 520 MASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKT 579
Query: 431 KNFRSFESS 439
N+ + SS
Sbjct: 580 -NYNNPVSS 587
Score = 178 (67.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 62/228 (27%), Positives = 96/228 (42%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTL---KDHTAEVQAVT 317
L HS V F + L+ S D + R+W + D K L K HT V V
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLW------SVDTKTALVAYKGHTGPVWDVA 428
Query: 318 VHATNKYFVTASLDNT---W-CFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG 373
YF TAS D T W C + + +SD FHP+ +
Sbjct: 429 FGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDC---------VTFHPNSAYVL 479
Query: 374 TGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL---RK 429
TG+S+ ++WDV +V F+GH VTA++ + +G+ +A+A +G + LWD+ R+
Sbjct: 480 TGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRR 539
Query: 430 LKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWN 477
+K R + S+ F + L +D V K ++N
Sbjct: 540 IKTMRGHRGN-----IYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYN 582
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 45/170 (26%), Positives = 73/170 (42%)
Query: 363 AAFHPDGLILGTGTSEALVKIWDVKSQ-------ANVAKFDG------HVGAVTAISFSE 409
A F PD ++ G E+ +++W +K+ +V DG H G V +FS
Sbjct: 330 AEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSP 389
Query: 410 NGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQ 468
+ YL + + D +LW + +++ P V F G Y A AS D Q
Sbjct: 390 DNKYLLSCSEDASARLWSVDTKTALVAYKGHTG--PVWDVAFGPFGHYFATASHD----Q 443
Query: 469 VASVKADWNCIKTFPDLSGTGKAT---CVKFGPDAKYIAVGSMDRNLRVF 515
A + W+C +P G + CV F P++ Y+ GS D+ R++
Sbjct: 444 TAQL---WSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLW 490
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 182 (69.1 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 44/164 (26%), Positives = 77/164 (46%)
Query: 249 LFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKD 308
L+ + +++ ++SGH+ V F ++G LF + S D +VR W S + C HTL
Sbjct: 48 LWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFASASHDCSVRTWCNS---SLKCTHTLTA 104
Query: 309 HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD 368
H V+ V+ ++ ++ DN + + SG L ++ G S+ F D
Sbjct: 105 HRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGALLEELK-----GHNAAVQSSVFSSD 159
Query: 369 GLILGTGTSEALVKIWDVKS-QANVAKFDGHVGAVTAISFSENG 411
+ TG+ + V++W ++ QA GH+G V + FS G
Sbjct: 160 SQSVATGSWDRAVRVWKLRDRQAEAVVLQGHLGNVACLCFSVAG 203
Score = 130 (50.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 45/161 (27%), Positives = 67/161 (41%)
Query: 364 AFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GV 422
AF PD +L T + +W + +A GH G V FS +G A+A+HD V
Sbjct: 29 AFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFASASHDCSV 88
Query: 423 KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTF 482
+ W LK + + T V F G +L D R + S+++
Sbjct: 89 RTWCNSSLKCTHTLTAHRRSVET--VSFSPDGQWLLSGGWDNRAL-IWSIQSG----ALL 141
Query: 483 PDLSGTGKATCVK-FGPDAKYIAVGSMDRNLRVFGLPGNDA 522
+L G A F D++ +A GS DR +RV+ L A
Sbjct: 142 EELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQA 182
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 45/171 (26%), Positives = 72/171 (42%)
Query: 262 SGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHAT 321
S H +V F + L LT + +W+ S ++ HT V+ +
Sbjct: 19 SRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTS---TAKLLASVSGHTGPVKCCVFSSD 75
Query: 322 NKYFVTASLD---NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSE 378
+ F +AS D TWC +S + T A + +F PDG L +G +
Sbjct: 76 GRLFASASHDCSVRTWC----NSSLKCTHTLTA----HRRSVETVSFSPDGQWLLSGGWD 127
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLR 428
IW ++S A + + GH AV + FS + +AT + D V++W LR
Sbjct: 128 NRALIWSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLR 178
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 199 (75.1 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 57 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 115
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 116 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 168
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 169 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 228
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 229 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 285
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 286 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 179 (68.1 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 95
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 96 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 150
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 151 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 208
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 209 EHEHVVECISWAPESSYSSISEA 231
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 91 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 148
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 149 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 205
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 206 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 265
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 266 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 322
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 323 FHKTAPYVVTGSVDQTVKVWE 343
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 41 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 100
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 101 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 157
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 158 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 206
Score = 136 (52.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 130 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 189
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 190 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 246
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 247 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 306
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 307 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 201 (75.8 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 LMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++++G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF--------- 407
E + DG +L + +++ V++W V ++ A+ H V IS+
Sbjct: 234 REWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTI 293
Query: 408 -----SEN------GYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
SEN G +L + + D +K+WD+ + D+ V F H G
Sbjct: 294 SEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWV--RGVLF-HPGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
V+ AD + ++ K + C+KT + T + F + Y+ GS+D+ ++V+
Sbjct: 351 RFVVSCADDKTLRIWDYK-NKRCMKTLS--AHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 49/166 (29%), Positives = 81/166 (48%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F L ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWD-YEAGDFE--RTLKGHTDSVQDISFDQ 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
T K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLW 425
+K+W+V + V F GH V + +++G LA+ ++D V++W
Sbjct: 216 MKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 61/260 (23%), Positives = 112/260 (43%)
Query: 230 DIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
DI + + ++A+ D L+D + + T+ GH V+SV + GD ++ S DK
Sbjct: 155 DISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDK 214
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFYD 338
T+++W+ + Y C T H V+ V + + S D T W C +
Sbjct: 215 TMKMWEVAT--GY-CVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAE 271
Query: 339 LSSGI----CLTQVSDAG--TDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANV 392
L C++ ++ T G + G L +G+ + +K+WD+ + +
Sbjct: 272 LREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCL 331
Query: 393 AKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES-SDSETPTNSVDF 450
GH V + F G ++ + A D +++WD KN R ++ S E S+DF
Sbjct: 332 MTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY---KNKRCMKTLSAHEHFVTSLDF 388
Query: 451 DHSGSYLAVASAD--IRVYQ 468
+ Y+ S D ++V++
Sbjct: 389 HKASPYVVTGSVDQTVKVWE 408
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF + G L
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVAS 471
A+ + D +KLWD + + R+ D +SV +G ++ AS D +++++VA+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRDKTMKMWEVAT 223
Query: 472 VKADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
C+KTF TG V+ D +A S D+ +RV+ + + +E
Sbjct: 224 ----GYCVKTF-----TGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAE 271
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 56/221 (25%), Positives = 96/221 (43%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT-----VHATNKYFVTASLDNTWCF---- 336
D+TVRVW + +CK L++H V+ ++ H T T S +N
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESAHPTISE-ATGS-ENKKSGKPGP 309
Query: 337 YDLSSGICLT-QVSDAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKS 388
+ LS T ++ D T G FHP G + + + ++IWD K+
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKN 369
Query: 389 QANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 370 KRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 207 (77.9 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 65/257 (25%), Positives = 116/257 (45%)
Query: 273 FVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKY--FVTASL 330
F E +L + G ++ ++ E +++ HTL + V+++ + ++ F + L
Sbjct: 266 FHAESNLLVAGFSNGIFGLY---EMPDFNLIHTLSISQNGIDFVSINKSGEWLAFGASKL 322
Query: 331 DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
+ S L Q G + + A+ PDG + T + +K+WD++S
Sbjct: 323 GQLLVWEWQSESYILKQ------QGHFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGF 376
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVD 449
+ F H VTA F++ G L TA+ DG ++ WDL + +NFR+F ++ + + +
Sbjct: 377 CIVTFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTF-TAPTRLSFSCMA 435
Query: 450 FDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSM 508
D SG +A S D + SV+ + LSG G + V F PD + GS
Sbjct: 436 VDPSGEVVAAGSLDSFDVHIWSVQTG----QLLDQLSGHEGPVSAVAFAPDGGLLVSGSW 491
Query: 509 DRNLRVFGLPGNDAPSE 525
D+ R++ + SE
Sbjct: 492 DKTARIWSVFNRTQTSE 508
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 77/336 (22%), Positives = 135/336 (40%)
Query: 196 QVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSKD--VIATGGVDTNAVLF--D 251
Q P + D LE + H H + I +S+D + D A ++ +
Sbjct: 126 QTPDSATGDDGLE-FAPFVRHHSHAAHFDEV--RHIEWSRDSRFFLSASKDLTARIWSLN 182
Query: 252 RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ--GSEDGNYDCKHTLKDH 309
+ G T LSGH + V F + + T S D V WQ G +D D +
Sbjct: 183 QEEGFTPTVLSGHRQGVVGAWFSMDQETIYTVSKDGAVFDWQYVGPQDKEDDDMDGADES 242
Query: 310 TAEVQAVTVH---ATNKYFVTASL--DNTWCFYDLSSGIC-LTQVSDAGT----DGRPEG 359
+ V H N A+ ++ S+GI L ++ D G
Sbjct: 243 DLRWRIVKRHYFMQNNASLKCAAFHAESNLLVAGFSNGIFGLYEMPDFNLIHTLSISQNG 302
Query: 360 YTSAAFHPDGLILGTGTSE-ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAA 418
+ + G L G S+ + +W+ +S++ + K GH ++ A+++S +G + TAA
Sbjct: 303 IDFVSINKSGEWLAFGASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSPDGKRIVTAA 362
Query: 419 HDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWN 477
DG +K+WD+ F ++ + + F G+ L AS D S++A W+
Sbjct: 363 DDGKLKVWDIES--GFCIVTFTEHTSGVTACQFAKKGNVLFTASLD------GSIRA-WD 413
Query: 478 CIK--TFPDLSGTGKAT--CVKFGPDAKYIAVGSMD 509
I+ F + + + C+ P + +A GS+D
Sbjct: 414 LIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLD 449
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 64/286 (22%), Positives = 115/286 (40%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK-TVR 290
H +++ G + L++ P ++ TLS + V G+ G++ +
Sbjct: 267 HAESNLLVAGFSNGIFGLYEMPDFNLIHTLSISQNGIDFVSINKSGEWLAFGASKLGQLL 326
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
VW+ + +Y K + H + A+ K VTA+ D +D+ SG C+ ++
Sbjct: 327 VWEWQSE-SYILKQ--QGHFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFCIVTFTE 383
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-- 408
G T+ F G +L T + + ++ WD+ N F A T +SFS
Sbjct: 384 -----HTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFT----APTRLSFSCM 434
Query: 409 ---ENGYYLATAAHDG--VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD 463
+G +A + D V +W ++ + S E P ++V F G L S D
Sbjct: 435 AVDPSGEVVAAGSLDSFDVHIWSVQTGQLLDQL--SGHEGPVSAVAFAPDGGLLVSGSWD 492
Query: 464 IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMD 509
+ A + + +N +T L V PD+ +AV ++D
Sbjct: 493 ----KTARIWSVFNRTQTSEPLQLQADVLSVAVRPDSSQLAVSTLD 534
Score = 144 (55.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 67/234 (28%), Positives = 103/234 (44%)
Query: 131 QSERQIMPAESTAVTSNA-ALS-NGKRAPEDEDLGPAGK-KLHTGITPAIIAELTDCNAA 187
QSE I+ + + NA A S +GKR D G + +G E T
Sbjct: 331 QSESYILKQQGHFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFCIVTFTEHTS-GVT 389
Query: 188 LSQQRKKRQVPPALAPIDALERYTQLASHPLHKT-SKPGIVSLD---IHYSKDVIATGGV 243
Q KK V A +D R L + +T + P +S + S +V+A G +
Sbjct: 390 ACQFAKKGNVL-FTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSL 448
Query: 244 DTNAV-LFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDC 302
D+ V ++ +GQ++ LSGH V++V F +G L ++GS DKT R+W S
Sbjct: 449 DSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIW--SVFNRTQT 506
Query: 303 KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
L+ A+V +V V + ++LD F+ ++ QVS G DGR
Sbjct: 507 SEPLQLQ-ADVLSVAVRPDSSQLAVSTLDGQISFWSVTEA---QQVS--GVDGR 554
Score = 141 (54.7 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 50/200 (25%), Positives = 90/200 (45%)
Query: 233 YSKDV--IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
YS D I T D ++D SG + T + H+ VT+ +F +G++ T S D ++R
Sbjct: 351 YSPDGKRIVTAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVLFTASLDGSIR 410
Query: 291 VWQGSEDGNYDCKHTLKDHTA-EVQAVTVHATNKYFVTASLDNTWC-FYDLSSGICLTQV 348
W N+ T T + V + + SLD+ + + +G L Q+
Sbjct: 411 AWDLIRYRNF---RTFTAPTRLSFSCMAVDPSGEVVAAGSLDSFDVHIWSVQTGQLLDQL 467
Query: 349 SDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS 408
S G +G P ++ AF PDG +L +G+ + +IW V ++ ++ V +++
Sbjct: 468 S--GHEG-P--VSAVAFAPDGGLLVSGSWDKTARIWSVFNRTQTSEPLQLQADVLSVAVR 522
Query: 409 ENGYYLATAAHDG-VKLWDL 427
+ LA + DG + W +
Sbjct: 523 PDSSQLAVSTLDGQISFWSV 542
Score = 129 (50.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 234 SKDVIATGGVDTNAV-LFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVW 292
S +V+A G +D+ V ++ +GQ++ LSGH V++V F +G L ++GS DKT R+W
Sbjct: 439 SGEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIW 498
Query: 293 QGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFY--------------- 337
S L+ A+V +V V + ++LD F+
Sbjct: 499 --SVFNRTQTSEPLQLQ-ADVLSVAVRPDSSQLAVSTLDGQISFWSVTEAQQVSGVDGRR 555
Query: 338 DLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKF 395
D+S G +T A G + + + + DG L G + + ++ + + KF
Sbjct: 556 DVSGGRKITDRRTAANAGGTKAFHTIQYSMDGSCLIAGGNSKYMCLYSTTTMVLLKKF 613
Score = 60 (26.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 16/79 (20%), Positives = 36/79 (45%)
Query: 402 VTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVD-FDHSGSYLAVA 460
V+ +SF+ +G A+ +G+ ++ L F F+ + TP +++ ++ YL
Sbjct: 678 VSGVSFAPDGAAFCAASTEGLLIYSLDHTVQFDPFDLNMEITPASTLAVLENEKDYLKAL 737
Query: 461 SADIRVYQVASVKADWNCI 479
R+ + +K + I
Sbjct: 738 VMAFRLNEAGLIKRVYQAI 756
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 203 (76.5 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 50/177 (28%), Positives = 90/177 (50%)
Query: 253 PSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAE 312
P +++ +SGH+ V ++ + F TGS D T++VW + + K TL H +
Sbjct: 195 PPWKLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASG---ELKVTLTGHVSA 251
Query: 313 VQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372
++ + V + + Y + DN +DL S QV + G +G S A HP +L
Sbjct: 252 IRGLEVSSRHPYLFSVGEDNKVLCWDLESN---KQVRNYY--GHRQGVYSVALHPTLDVL 306
Query: 373 GTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG--YYLATAAHDGVKLWDL 427
+G + V++WD++++AN+ + GH G + ++ S+N ++ + VKLWDL
Sbjct: 307 FSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLK-SQNADPQVISGSMDTTVKLWDL 362
Score = 158 (60.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 61/268 (22%), Positives = 106/268 (39%)
Query: 213 LASHPLHKTSKPGIVS----LDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKV 268
LAS L K + G VS L++ + + G D + +D S + V GH + V
Sbjct: 236 LASGEL-KVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGV 294
Query: 269 TSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTA 328
SV D+ +G D VRVW N +K H + ++ + ++
Sbjct: 295 YSVALHPTLDVLFSGGRDNCVRVWDMRTRANI---FEMKGHKGTILSLKSQNADPQVISG 351
Query: 329 SLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKS 388
S+D T +DL++G S A +G S H TG ++ +K W
Sbjct: 352 SMDTTVKLWDLATG-----TSAATLTNHKKGVRSMVIHEKEYSFATGAADN-IKQWKCPD 405
Query: 389 QANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWD------LRKLKNFRSFESSDSE 442
+ + GH + A++ + + ++ + + WD +K ++ S + E
Sbjct: 406 GSFIKNLSGHNSIINAMALNADNVLVSGGDNGSISFWDWKTGYCFQKTQSIVQPGSLEGE 465
Query: 443 TPTNSVDFDHSGSYLAVASAD--IRVYQ 468
+ FD +GS L AD I+ Y+
Sbjct: 466 AGIFDMAFDKTGSRLITCEADKTIKFYK 493
Score = 149 (57.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 51/222 (22%), Positives = 90/222 (40%)
Query: 210 YTQLASHPLHKTSK-----PGIV-SLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSG 263
YT+ HP K + G V ++ + S + ATG D ++D SG++ TL+G
Sbjct: 188 YTKPEWHPPWKLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTG 247
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H + ++ + + D V W + N ++ H V +V +H T
Sbjct: 248 HVSAIRGLEVSSRHPYLFSVGEDNKVLCWD--LESNKQVRNYY-GHRQGVYSVALHPTLD 304
Query: 324 YFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKI 383
+ DN +D+ + + ++ G G S P + +G+ + VK+
Sbjct: 305 VLFSGGRDNCVRVWDMRTRANIFEMK--GHKGTILSLKSQNADPQVI---SGSMDTTVKL 359
Query: 384 WDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLW 425
WD+ + + A H V ++ E Y AT A D +K W
Sbjct: 360 WDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADNIKQW 401
Score = 127 (49.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 52/225 (23%), Positives = 98/225 (43%)
Query: 207 LERYTQLASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSK 266
LE Q+ ++ H+ G+ S+ +H + DV+ +GG D ++D + + + GH
Sbjct: 278 LESNKQVRNYYGHRQ---GVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKG 334
Query: 267 KVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFV 326
+ S+K ++GS D TV++W + + TL +H V+++ +H F
Sbjct: 335 TILSLKSQNADPQVISGSMDTTVKLWDLATGTS---AATLTNHKKGVRSMVIHEKEYSFA 391
Query: 327 TASLDNT--WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIW 384
T + DN W D G + +S G + A + D +++ G + + + W
Sbjct: 392 TGAADNIKQWKCPD---GSFIKNLS-----GHNSIINAMALNADNVLVSGGDNGS-ISFW 442
Query: 385 D-------VKSQANV--AKFDGHVGAVTAISFSENGYYLATAAHD 420
D K+Q+ V +G G + ++F + G L T D
Sbjct: 443 DWKTGYCFQKTQSIVQPGSLEGEAG-IFDMAFDKTGSRLITCEAD 486
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 204 (76.9 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 64/226 (28%), Positives = 105/226 (46%)
Query: 251 DRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHT 310
D +G + L GH V S +F+ + L+ S D ++R W + G++ + H
Sbjct: 328 DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW---DLGSFTNTVLYQGHA 384
Query: 311 AEVQAVTVHATNKYFVTASLDNT---WCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHP 367
V + + + YF + S D T W F D + + + A D FHP
Sbjct: 385 YPVWDLDISPYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVD-------CVKFHP 436
Query: 368 DGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWD 426
+ L TG+++ V++W + +V F GH G V +++FS NG YLA+A D +KLWD
Sbjct: 437 NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 496
Query: 427 LRKLKNFRSFES-SDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
L ++ +D+ T S+ F +A AS D +RV+ +
Sbjct: 497 LASGTLYKELRGHTDNIT---SLTFSPDSGLIASASMDNSVRVWDI 539
Score = 183 (69.5 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 54/191 (28%), Positives = 85/191 (44%)
Query: 255 GQIVTTL--SGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAE 312
G T+ GH+ V + F +GS D+T R+W S D Y + H A+
Sbjct: 372 GSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLW--SFDRTYPLR-IYAGHLAD 428
Query: 313 VQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLIL 372
V V H + Y T S D T + G + + G G P S AF P+G L
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT--GHRG-P--VLSLAFSPNGKYL 483
Query: 373 GTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK 431
+ + +K+WD+ S + GH +T+++FS + +A+A+ D V++WD+R
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTY 543
Query: 432 NFRSFESSDSE 442
+ S SE
Sbjct: 544 CSAPADGSSSE 554
Score = 167 (63.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 52/192 (27%), Positives = 81/192 (42%)
Query: 209 RYTQLASHP---LHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHS 265
RY L S L++ + LDI A+G D A L+ + +GH
Sbjct: 367 RYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHL 426
Query: 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYF 325
V VKF + TGS DKTVR+W ++ GN H V ++ KY
Sbjct: 427 ADVDCVKFHPNSNYLATGSTDKTVRLWS-AQQGN--SVRLFTGHRGPVLSLAFSPNGKYL 483
Query: 326 VTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWD 385
+A D +DL+SG ++ G + TS F PD ++ + + + V++WD
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELR-----GHTDNITSLTFSPDSGLIASASMDNSVRVWD 538
Query: 386 VKSQANVAKFDG 397
+++ A DG
Sbjct: 539 IRNTYCSAPADG 550
Score = 159 (61.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 60/240 (25%), Positives = 102/240 (42%)
Query: 293 QGSEDGNYDCK-HTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
+ ED N + L+ H V + A + ++ S D + ++DL S T
Sbjct: 324 EDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS---FTNT--V 378
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411
G P L +G+ + ++W + + GH+ V + F N
Sbjct: 379 LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 438
Query: 412 YYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQ 468
YLAT + D V+LW ++ + R F + P S+ F +G YLA A D ++++
Sbjct: 439 NYLATGSTDKTVRLWSAQQGNSVRLF--TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 496
Query: 469 VASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGN--DAPSE 525
+AS + +L G T T + F PD+ IA SMD ++RV+ + AP++
Sbjct: 497 LASGTL-------YKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPAD 549
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 199 (75.1 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 67/264 (25%), Positives = 117/264 (44%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVT 317
+ LSGH +V KF G+ + D+ + +W + G+ D TLK H+ V +
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLW--NVYGDCDNYATLKGHSGAVMELH 143
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
+ +AS D T +D +G + ++ G A P ++ TG+
Sbjct: 144 YNTDGSMLFSASTDKTVAVWDSETGERVKRLK--GHTSFVNSCYPARRGPQ--LVCTGSD 199
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK-NFRS 435
+ VK+WD++ +A V F + V A++F++ + + D +K+WDLR+ K +
Sbjct: 200 DGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 258
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATC 493
+DS T + GSYL + D +R++ V C+K F +
Sbjct: 259 RGHADSVT---GLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNL 315
Query: 494 VK--FGPDAKYIAVGSMDRNLRVF 515
++ + PD IA GS DR + V+
Sbjct: 316 LRCSWSPDGSKIAGGSADRFVYVW 339
Score = 155 (59.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 40/188 (21%), Positives = 85/188 (45%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
++ TG D L+D V T ++ +V +V F D ++G D ++VW +
Sbjct: 193 LVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 251
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGI----CLTQVSDAG 352
+ +T++ H V +++ + Y ++ ++DNT +D+ C+ ++
Sbjct: 252 N---KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCV-KIFQGN 307
Query: 353 TDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGY 412
+ ++ PDG + G+++ V +WD S+ + K GH G+V ++F
Sbjct: 308 VHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEP 367
Query: 413 YLATAAHD 420
+ +A+ D
Sbjct: 368 IILSASSD 375
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 203 (76.5 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 66/259 (25%), Positives = 120/259 (46%)
Query: 256 QIVTTLSGHSKKVTSVKFVTE-GDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQ 314
+++ +GH+K V +++++ + G L L+ D TV++W G+ C T H+ V+
Sbjct: 295 KLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAY--GDRRCIQTYMGHSQAVR 352
Query: 315 AVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG----L 370
+ + F++ D +D +G L+ T+G+ Y F+PD
Sbjct: 353 DICFSNDGRRFLSCGYDRQTRLWDTETGKILSSF----TNGKIP-YC-IKFNPDDDKQEQ 406
Query: 371 ILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRK 429
L G+ + +++ WD+KS V ++D H+GAV I+F ++ T++ D +++WD
Sbjct: 407 FLCGGSDKKIIQ-WDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDWG- 464
Query: 430 LKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSG 487
+ + S S +V G + A S D I +Y A + N K F +
Sbjct: 465 IPVVIKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYS-ARDRFRMNKKKRFLGHNV 523
Query: 488 TGKATCVKFGPDAKYIAVG 506
+G A + F PD K+I G
Sbjct: 524 SGYACQLGFSPDGKFIYSG 542
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 49/189 (25%), Positives = 76/189 (40%)
Query: 241 GGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNY 300
GG D + +D S QIV H V ++ F+ + F+T S DK++RVW
Sbjct: 410 GGSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDWGIP--V 467
Query: 301 DCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGY 360
K+ + AV +H K+F SLDN Y + + GY
Sbjct: 468 VIKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNK-KKRFLGHNVSGY 526
Query: 361 T-SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE-NGYYLATAA 418
F PDG + +G S WD K+ + + H I ++ +AT +
Sbjct: 527 ACQLGFSPDGKFIYSGDSTGKAFFWDWKTSKIIKTINAHNNVCIGIEWAPLEPSKVATCS 586
Query: 419 -HDGVKLWD 426
++ +KLWD
Sbjct: 587 WNNEIKLWD 595
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 188 (71.2 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 69/252 (27%), Positives = 107/252 (42%)
Query: 266 KKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYF 325
KK+ VK + +L S D R+ E + + K L H+ V V+ Y
Sbjct: 458 KKLRKVKSAADLNLIDKESDDVLERIMD--EKTSSESK-ILHGHSGPVYGVSFSPDRNYL 514
Query: 326 VTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWD 385
+++S D T + L + CL G G F P G +G + + ++W
Sbjct: 515 LSSSEDGTIRLWSLQTFTCLV-----GYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWA 569
Query: 386 VKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETP 444
+ F GH+ VT F N Y+AT + D V+LWD+ R F + + P
Sbjct: 570 TDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIF--TGHKGP 627
Query: 445 TNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYI 503
+S+ F +G +LA S D RV + D +L G TG +KF D + I
Sbjct: 628 IHSLAFSPNGKFLASGSTDGRV-----LLWDIGHGLMIAELKGHTGTIYALKFSRDGEII 682
Query: 504 AVGSMDRNLRVF 515
A GS+D +R++
Sbjct: 683 ASGSIDNTVRLW 694
Score = 187 (70.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 60/224 (26%), Positives = 92/224 (41%)
Query: 249 LFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKD 308
+ D + L GHS V V F + + L+ S D T+R+W + C K
Sbjct: 483 IMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQ---TFTCLVGYKG 539
Query: 309 HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPD 368
H V YFV+ D + L + G T FHP+
Sbjct: 540 HNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFA-----GHLADVTCTRFHPN 594
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
+ TG+S+ V++WDV + V F GH G + +++FS NG +LA+ + DG V LWD+
Sbjct: 595 SNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI 654
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQV 469
E ++ F G +A S D +R++ V
Sbjct: 655 GH--GLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 156 (60.0 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 43/175 (24%), Positives = 74/175 (42%)
Query: 240 TGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGN 299
+GG D A L+ Q + +GH VT +F + TGS+D+TVR+W +GN
Sbjct: 558 SGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVL-NGN 616
Query: 300 YDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEG 359
C H + ++ K+ + S D +D+ G+ + ++ G
Sbjct: 617 --CVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELK-----GHTGT 669
Query: 360 YTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
+ F DG I+ +G+ + V++WDV + + D A I +N L
Sbjct: 670 IYALKFSRDGEIIASGSIDNTVRLWDVMRAIDDVETDDFTAATGHIHLPDNSQEL 724
Score = 142 (55.0 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFR 434
+ + L +I D K+ + GH G V +SFS + YL +++ DG ++LW L+
Sbjct: 476 SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLV 535
Query: 435 SFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCV 494
++ + P F G Y D RV ++ + + ++ F TC
Sbjct: 536 GYKGHNY--PVWDTQFSPFGYYFVSGGHD-RVARLWATD-HYQPLRIFA--GHLADVTCT 589
Query: 495 KFGPDAKYIAVGSMDRNLRVFG-LPGN 520
+F P++ Y+A GS DR +R++ L GN
Sbjct: 590 RFHPNSNYVATGSSDRTVRLWDVLNGN 616
Score = 130 (50.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 44/158 (27%), Positives = 70/158 (44%)
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
H + + +ATG D L+D +G V +GH + S+ F G +GS D V +
Sbjct: 592 HPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLL 651
Query: 292 WQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDA 351
W + G+ LK HT + A+ + + S+DNT +D+ + + D
Sbjct: 652 W---DIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV-----MRAIDDV 703
Query: 352 GTDGRPEGYTSAAFH---PDG---LILGTGTSEALVKI 383
TD +T+A H PD L+LGT S++ I
Sbjct: 704 ETDD----FTAATGHIHLPDNSQELLLGTYHSKSTAVI 737
Score = 64 (27.6 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 253 PSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVW 292
PS T L+ + + +T+V F + L G AD TVRVW
Sbjct: 415 PSICFYTFLNAY-QGLTAVDFTDDSSLIAGGFADSTVRVW 453
Score = 51 (23.0 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDV 386
+G T+ F D ++ G +++ V++W V
Sbjct: 427 QGLTAVDFTDDSSLIAGGFADSTVRVWSV 455
Score = 41 (19.5 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 123 DEARSLLA--QSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAE 180
++ ++LLA Q ++ AES + A + D G GK G T +++
Sbjct: 68 EDQQTLLAVLQFLKRSKLAESVEILRREAGLAEELEDSHTDAGAGGKDGDAGDTKTLLSR 127
Query: 181 LTDCNAALSQ 190
++ AA Q
Sbjct: 128 VSIAGAAAPQ 137
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 199 (75.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDFK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 182 (69.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 53/203 (26%), Positives = 96/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
T K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY ++ A
Sbjct: 274 EHEHVVECISWAPESSYSTISEA 296
Score = 178 (67.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 63/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 156 ISFD-HTGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAG--TDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ T G + G L +G+ + +K+WD+ +
Sbjct: 271 ELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 153 (58.9 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 47/175 (26%), Positives = 80/175 (45%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 199 (75.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 274 EHEHVVECISWAPESSYSSISEA 296
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 156 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 199 (75.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 274 EHEHVVECISWAPESSYSSISEA 296
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 156 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 199 (75.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 274 EHEHVVECISWAPESSYSSISEA 296
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 156 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 199 (75.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 274 EHEHVVECISWAPESSYSSISEA 296
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 156 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 199 (75.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 274 EHEHVVECISWAPESSYSSISEA 296
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 156 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 199 (75.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 274 EHEHVVECISWAPESSYSSISEA 296
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 156 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 199 (75.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 274 EHEHVVECISWAPESSYSSISEA 296
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 156 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 199 (75.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 274 EHEHVVECISWAPESSYSSISEA 296
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 156 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 199 (75.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 69/300 (23%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+AS D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 64/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ S D
Sbjct: 156 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 51/203 (25%), Positives = 97/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT V+ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVEDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 274 EHEHVVECISWAPESSYSSISEA 296
Score = 154 (59.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ AS D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSASRD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 194 (73.4 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 58/247 (23%), Positives = 118/247 (47%)
Query: 225 GIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGS 284
G+VS++I + + A+ +D + L+D +G+ + ++ +V F + TGS
Sbjct: 66 GVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGS 125
Query: 285 ADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGIC 344
V ++ G E G + H+L + ++ KY + ++D +D+++G
Sbjct: 126 HLGKVNIF-GVESGKKE--HSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 345 LTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVA-KFDGHVGAVT 403
L + +G S F PD +L T + + +KI+DV+ AN+A GH V
Sbjct: 183 LHTL-----EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGTLSGHGSWVL 236
Query: 404 AISFS-ENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASA 462
+++FS ++ +++++++ +K+WD +F D + SV ++ +GS + A
Sbjct: 237 SVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTF--FDHQDQVWSVKYNPTGSKIVSAGD 294
Query: 463 D--IRVY 467
D I +Y
Sbjct: 295 DRAIHIY 301
Score = 189 (71.6 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 69/288 (23%), Positives = 122/288 (42%)
Query: 236 DVIATGGVDTNAVLFDRPSGQIVT--TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQ 293
+ I TG +D ++ ++ TL GH V SV G + + S D +R+W
Sbjct: 33 ETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWD 92
Query: 294 GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGT 353
E G K ++ + V +KY T S + + SG +
Sbjct: 93 -LETGK-QIK-SMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESG-----KKEHSL 144
Query: 354 DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYY 413
D R + S A+ PDG L +G + ++ I+D+ + + +GH + +++FS +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 414 LATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVA 470
L TA+ DG +K++D++ N S SV F ++ +S+D I+V+ +
Sbjct: 205 LVTASDDGYIKIYDVQHA-NLAGTLSGHGSWVL-SVAFSPDDTHFVSSSSDKSIKVWDTS 262
Query: 471 SVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFGLP 518
S +C+ TF D + VK+ P I DR + ++ P
Sbjct: 263 SR----SCVNTFFDHQD--QVWSVKYNPTGSKIVSAGDDRAIHIYDCP 304
Score = 135 (52.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 216 HPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVT 275
H L + P I SL ++ T D ++D + TLSGH V SV F
Sbjct: 184 HTLEGHAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSP 242
Query: 276 EGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWC 335
+ F++ S+DK+++VW S + C +T DH +V +V + T V+A D
Sbjct: 243 DDTHFVSSSSDKSIKVWDTS---SRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIH 299
Query: 336 FYD 338
YD
Sbjct: 300 IYD 302
>MGI|MGI:1341200 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341200 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 CTD:5822 HOVERGEN:HBG030681
OrthoDB:EOG4R7V93 EMBL:AK088254 EMBL:AK088983 IPI:IPI00469755
RefSeq:NP_083822.1 RefSeq:XP_003946476.1 UniGene:Mm.103522
ProteinModelPortal:Q8BU03 SMR:Q8BU03 STRING:Q8BU03
PhosphoSite:Q8BU03 PRIDE:Q8BU03 Ensembl:ENSMUST00000042556
GeneID:110816 KEGG:mmu:110816 InParanoid:Q8BU03 ChiTaRS:PWP2
NextBio:364713 Bgee:Q8BU03 CleanEx:MM_PWP2 Genevestigator:Q8BU03
GermOnline:ENSMUSG00000032834 Uniprot:Q8BU03
Length = 919
Score = 204 (76.9 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 93/380 (24%), Positives = 163/380 (42%)
Query: 94 LHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNG 153
L++ Q+ + ++Q D + RLK R +L Q E++ E G
Sbjct: 203 LYSLSQDGALCVWQCDTPPEGL-RLKAPRGWKADIL-QREKE-EEEEDEEEGDRETTIRG 259
Query: 154 KRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQ---VPPALAPIDALERY 210
K P +++ GK ++ + + + D N S K+ V + I L
Sbjct: 260 KTTPAEQER--VGKVKYSRLAKYFLNKEGDFNNLTSAAYHKKTHLLVTGFASGIFHLHEL 317
Query: 211 TQL-ASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVL-FDRPSGQIVTTLSGHSKKV 268
+ H L S + S+ I+ S D IA G +L ++ S V GH +
Sbjct: 318 PEFNLIHSL-SISDQRVASVAINSSGDWIAFGCSGMGQLLVWEWQSESYVLKQQGHFNSM 376
Query: 269 TSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTA 328
++ + +G +TG D V+VW + G C TL +H++ V VT T VT+
Sbjct: 377 VALAYSPDGQYIVTGGDDGKVKVWN-TLSGF--CFVTLTEHSSGVTGVTFTTTGHVIVTS 433
Query: 329 SLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDVK 387
SLD T +DL + T RP ++ A G I+ G ++ + +W ++
Sbjct: 434 SLDGTVRAFDLHR----YRNFRTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQ 489
Query: 388 SQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTN 446
+ + GH G V+ + F+ LA+A+ D V+LWD+ ++R+ E+ +
Sbjct: 490 TGRLLDVLSGHEGPVSGLCFNPMKSILASASWDKTVRLWDM--FDSWRTKETLTLTSDAL 547
Query: 447 SVDFDHSGSYLAVASADIRV 466
+V F G+ LAVA+ + ++
Sbjct: 548 AVTFRPDGAELAVATLNSQI 567
Score = 167 (63.8 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 61/259 (23%), Positives = 113/259 (43%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
G +TS + + L +TG A + + E ++ H+L V +V ++++
Sbjct: 286 GDFNNLTSAAYHKKTHLLVTGFASGIFHLHELPE---FNLIHSLSISDQRVASVAINSSG 342
Query: 323 KY--FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ F + + + S L Q G + A+ PDG + TG +
Sbjct: 343 DWIAFGCSGMGQLLVWEWQSESYVLKQ------QGHFNSMVALAYSPDGQYIVTGGDDGK 396
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
VK+W+ S H VT ++F+ G+ + T++ DG V+ +DL + +NFR+F +S
Sbjct: 397 VKVWNTLSGFCFVTLTEHSSGVTGVTFTTTGHVIVTSSLDGTVRAFDLHRYRNFRTF-TS 455
Query: 440 DSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGP 498
T + V D SG ++ + D V S++ + LSG G + + F P
Sbjct: 456 PRPTQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQTG----RLLDVLSGHEGPVSGLCFNP 511
Query: 499 DAKYIAVGSMDRNLRVFGL 517
+A S D+ +R++ +
Sbjct: 512 MKSILASASWDKTVRLWDM 530
Score = 151 (58.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 57/222 (25%), Positives = 92/222 (41%)
Query: 233 YSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
YS D I TGG D +++ SG TL+ HS VT V F T G + +T S D TVR
Sbjct: 381 YSPDGQYIVTGGDDGKVKVWNTLSGFCFVTLTEHSSGVTGVTFTTTGHVIVTSSLDGTVR 440
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCF-YDLSSGICLTQVS 349
+ N+ + + V V ++ + + D+ F + + +G L +S
Sbjct: 441 AFDLHRYRNF--RTFTSPRPTQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQTGRLLDVLS 498
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE 409
G +G G F+P IL + + + V++WD+ + A++F
Sbjct: 499 --GHEGPVSGL---CFNPMKSILASASWDKTVRLWDMFDSWRTKETLTLTSDALAVTFRP 553
Query: 410 NGYYLATAA-HDGVKLWDLRKLKNFRSFESS-DSETPTNSVD 449
+G LA A + + WD S E D +T +D
Sbjct: 554 DGAELAVATLNSQITFWDPENAVQVGSIEGRHDLKTGRKELD 595
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 200 (75.5 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 59/209 (28%), Positives = 104/209 (49%)
Query: 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF 280
T G V L + Y + VI TG D+ ++D SG+++ TL H++ V ++F G L
Sbjct: 262 TGHTGSV-LCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCN-G-LM 318
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
+T S D+++ VW + + + L H A V V +KY V+AS D T + S
Sbjct: 319 VTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTS 376
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+ + ++ G G + D L++ +G+S+ +++WD++ A + +GH
Sbjct: 377 TCEFVRTLN-----GHKRGIACLQYR-DRLVV-SGSSDNTIRLWDIECGACLRVLEGHEE 429
Query: 401 AVTAISFSENGYYLATAAHDG-VKLWDLR 428
V I F + + A+DG +K+WDL+
Sbjct: 430 LVRCIRFDNKR--IVSGAYDGKIKVWDLQ 456
Score = 130 (50.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 51/235 (21%), Positives = 98/235 (41%)
Query: 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVT---TLSGHSKKVTSVKFVTEGDLFLTGSA 285
L + + ++ T D + ++D S ++ L GH V V F + ++ S
Sbjct: 309 LHLRFCNGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDF--DDKYIVSASG 366
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+T++VW S + TL H + + ++ V+ S DNT +D+ G CL
Sbjct: 367 DRTIKVWSTS---TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL 421
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN---------VAKFD 396
+ +G E F D + +G + +K+WD+++ + +
Sbjct: 422 RVL-----EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV 474
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDF 450
H G V + F E + + +++HD + +WD N S SD +P+ + +
Sbjct: 475 EHSGRVFRLQFDE--FQIISSSHDDTILIWDFL---NVSSNGQSDGRSPSRTYTY 524
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 42/174 (24%), Positives = 82/174 (47%)
Query: 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQA 315
Q + S +SK V +++ + D ++G D ++++W + + +C L HT V
Sbjct: 216 QRIQCRSENSKGVYCLQY--DDDKIISGLRDNSIKIW---DKQSLECLKVLTGHTGSV-- 268
Query: 316 VTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
+ + + VT S D+T +D+SSG L + E F +GL++ T
Sbjct: 269 LCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHN-----EAVLHLRFC-NGLMV-TC 321
Query: 376 TSEALVKIWDVKSQANVAK---FDGHVGAVTAISFSENGYYLATAAHDG-VKLW 425
+ + + +WD+ S +++ GH AV + F + Y+ +A+ D +K+W
Sbjct: 322 SKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVW 373
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 200 (75.5 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 59/209 (28%), Positives = 104/209 (49%)
Query: 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF 280
T G V L + Y + VI TG D+ ++D SG+++ TL H++ V ++F G L
Sbjct: 262 TGHTGSV-LCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCN-G-LM 318
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
+T S D+++ VW + + + L H A V V +KY V+AS D T + S
Sbjct: 319 VTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTS 376
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+ + ++ G G + D L++ +G+S+ +++WD++ A + +GH
Sbjct: 377 TCEFVRTLN-----GHKRGIACLQYR-DRLVV-SGSSDNTIRLWDIECGACLRVLEGHEE 429
Query: 401 AVTAISFSENGYYLATAAHDG-VKLWDLR 428
V I F + + A+DG +K+WDL+
Sbjct: 430 LVRCIRFDNKR--IVSGAYDGKIKVWDLQ 456
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 51/231 (22%), Positives = 97/231 (41%)
Query: 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVT---TLSGHSKKVTSVKFVTEGDLFLTGSA 285
L + + ++ T D + ++D S ++ L GH V V F + ++ S
Sbjct: 309 LHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF--DDKYIVSASG 366
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+T++VW S + TL H + + ++ V+ S DNT +D+ G CL
Sbjct: 367 DRTIKVWSTS---TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL 421
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN---------VAKFD 396
+ +G E F D + +G + +K+WD+++ + +
Sbjct: 422 RVL-----EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV 474
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLK-NFRSFESSDSETPT 445
H G V + F E + + +++HD + +WD + N ++ S S T T
Sbjct: 475 EHSGRVFRLQFDE--FQIISSSHDDTILIWDFLNVSTNGQTEGRSPSRTYT 523
>UNIPROTKB|A4RJV3 [details] [associations]
symbol:MDV1 "Mitochondrial division protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000002
"mitochondrial genome maintenance" evidence=ISS] [GO:0000266
"mitochondrial fission" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0030014 "CCR4-NOT complex" evidence=ISS]
[GO:0030015 "CCR4-NOT core complex" evidence=ISS] [GO:0051020
"GTPase binding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006352
GO:GO:0000002 GO:GO:0006402 EMBL:CM001232 GO:GO:0030015
OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354 GO:GO:0051020
RefSeq:XP_003714706.1 ProteinModelPortal:A4RJV3 STRING:A4RJV3
GeneID:2679351 KEGG:mgr:MGG_01711 Uniprot:A4RJV3
Length = 661
Score = 141 (54.7 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 35/109 (32%), Positives = 59/109 (54%)
Query: 372 LGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKL 430
L GT++ +V++WD++S GH G VTA+ F +N +L T +HD +++WDLR
Sbjct: 519 LACGTADGMVRLWDLRSGQVHRNLVGHTGPVTALQF-DN-MHLVTGSHDRSIRIWDLRTG 576
Query: 431 KNFRSFESSDSETPTNSVDFDHSGSYLAVASADI-RVYQVASVKADWNC 478
F +F + P S+ FD + ++ A D+ +VY + W+C
Sbjct: 577 SIFDAFAY---DHPVTSMMFD-ARRIVSAAGEDVVKVYDKVESR-QWDC 620
Score = 110 (43.8 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 44/190 (23%), Positives = 90/190 (47%)
Query: 115 IARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTG-I 173
+A L++E L + E ++ A+ A A + + +P D D A + + G +
Sbjct: 215 LAALEQEETLLEHDLMEVEARVEDAQMLA--DEAESTAQQSSPRDTD--DADAEDNDGFM 270
Query: 174 TPAIIAELTDCNAALSQQRKKRQVP-PALAPI-DALERYTQLASHPLHKTSKPGIVSLDI 231
+ +I ++ + S+ RK R V ++A + + E T + H+ I ++D
Sbjct: 271 SQSIYEKIPSAASTPSKSRKPRIVRRKSMAVLHEHFEPGTSIRELRAHQDC---ITAMDF 327
Query: 232 HYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRV 291
+ + +D + ++D +G+ + +L GH+ V +++ E ++ TGS D TVR+
Sbjct: 328 DAPFGTLVSAAMDDSVKVWDLNAGRCIGSLEGHTASVRALQ--VEDNILATGSRDATVRL 385
Query: 292 WQGSEDGNYD 301
W S+ +YD
Sbjct: 386 WDLSK-AHYD 394
Score = 56 (24.8 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 457 LAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRV 514
LA +AD +R++ + S + N + TG T ++F D ++ GS DR++R+
Sbjct: 519 LACGTADGMVRLWDLRSGQVHRNLV------GHTGPVTALQF--DNMHLVTGSHDRSIRI 570
Query: 515 FGL 517
+ L
Sbjct: 571 WDL 573
Score = 44 (20.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 231 IHYSKDVIATGGVDTNAVLFDRPSGQIVTTL 261
+H+ D + +G D +D G+ V TL
Sbjct: 445 LHFKGDTLVSGSSDKTIRQWDLVKGRCVQTL 475
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 195 (73.7 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 69/265 (26%), Positives = 120/265 (45%)
Query: 258 VTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKH--TLKDHTAEVQA 315
+ LSGH V ++KF G L +GS D+ + +W+ G DCK+ LK H +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWR--VHG--DCKNFMVLKGHKNAILD 101
Query: 316 VTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
+ + V+AS D T +D+ +G + ++++ + T P LI+ +G
Sbjct: 102 LHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRG--PP-LII-SG 157
Query: 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFR 434
+ + K+WD++ + + F +TA+SFS+ + T D VK+WDLRK +
Sbjct: 158 SDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATM 216
Query: 435 SFESSDSETPTNSVDFDHSGSYLAVASADIR--VYQVASVKADWNCIKTFPDLSGTGKAT 492
+ E +T T + GSYL D + V+ + C+K F +
Sbjct: 217 TLEGHQ-DTITG-MSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKN 274
Query: 493 CVK--FGPDAKYIAVGSMDRNLRVF 515
+K + PD + GS DR + ++
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIW 299
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 48/189 (25%), Positives = 83/189 (43%)
Query: 237 VIATGGVDTNAVLFD-RPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
+I +G D A L+D R G I T + ++T+V F D TG D V+VW
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKY--QITAVSFSDAADKIFTGGVDNDVKVWD-L 209
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS----SGICLTQVSDA 351
G + TL+ H + +++ Y +T +DN C +D+ C+ ++ +
Sbjct: 210 RKG--EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCV-KIFEG 266
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENG 411
+ ++ PDG + G+S+ +V IWD S+ + K GH G+V F
Sbjct: 267 HQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTE 326
Query: 412 YYLATAAHD 420
+ + + D
Sbjct: 327 PIIGSCSSD 335
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 201 (75.8 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 61/212 (28%), Positives = 91/212 (42%)
Query: 259 TTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTL---KDHTAEVQA 315
++L GH++ V V + + L+ S D R+W + D K T+ H A +
Sbjct: 397 SSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLW------SKDTKSTIVKYAGHNAPIWD 450
Query: 316 VTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
V YF TAS D T +D+ L G +FHP+ L TG
Sbjct: 451 VQFSPFGYYFATASHDQTARLWDVEHAAPLRVFV-----GHQNDVDCVSFHPNAAYLATG 505
Query: 376 TSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFR 434
+S+ ++WDV++ V F+ H V+A+ S +G LA+A G+ K+WDLR
Sbjct: 506 SSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHV 565
Query: 435 SFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
SF S S+ F + L AD V
Sbjct: 566 SFVKHSSIV--YSLSFSYDNKILVSGGADTDV 595
Score = 189 (71.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 59/230 (25%), Positives = 97/230 (42%)
Query: 215 SHPLHKTSKPG----IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTS 270
+ PL K+S G + + I K+ I + D L+ + + + +GH+ +
Sbjct: 391 NEPLQKSSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWD 450
Query: 271 VKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASL 330
V+F G F T S D+T R+W H +V V+ H Y T S
Sbjct: 451 VQFSPFGYYFATASHDQTARLWDVEHAAPL---RVFVGHQNDVDCVSFHPNAAYLATGSS 507
Query: 331 DNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
D+T +D+ +G + +V +A P ++ DGL L + ++K+WD++S
Sbjct: 508 DHTTRMWDVRTGGTV-RVFNAHHS--P--VSALCMSADGLSLASADESGIIKVWDLRSSN 562
Query: 391 NVAKFDGHVGAVTAISFS-ENGYYLATAAHDGVKLWDLRKLKNFRSFESS 439
F H V ++SFS +N ++ A V WDL N E S
Sbjct: 563 QHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDLTYRNNLSDGEQS 612
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 67/269 (24%), Positives = 129/269 (47%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
+L GHS V+ ++G L+ S DKT+R+W+ + G + HT +V +V+
Sbjct: 58 SLKGHSHIVSDCVISSDGAYALSASWDKTLRLWELAT-GTTTRRFV--GHTNDVLSVSFS 114
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDG---LILGTGT 376
A N+ V+ S D + ++ + G C +++ G E + F P+ +I+ +G
Sbjct: 115 ADNRQIVSGSRDRSIKLWN-TLGDCKYTITEKG---HSEWVSCVRFSPNPQNPVIVSSGW 170
Query: 377 SEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVK-LWDLRKLKNFRS 435
+ LVK+W++ S GH G + ++ S +G A+ DG LWDL + K+ S
Sbjct: 171 DK-LVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYS 229
Query: 436 FESSDSETPTNSVDFDHSGSYLAVASAD-IRVYQVASVKADWNCIKTFPDLSGTGKAT-- 492
++D +++ F + +L A+A I ++ + K+ + +K P+ + GK +
Sbjct: 230 LNANDE---IHALVFSPNRYWLCAATASSIIIFDLEK-KSKVDELK--PEFAAVGKKSRE 283
Query: 493 --CVK--FGPDAKYIAVGSMDRNLRVFGL 517
C+ + D + + G D +R +G+
Sbjct: 284 PECISLAWSADGQTLFAGYTDNIIRAWGV 312
Score = 178 (67.7 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 64/266 (24%), Positives = 112/266 (42%)
Query: 170 HTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQ--LASHPLHKTSKPGIV 227
H G ++ + + N LS R K + L + Y + L H H S ++
Sbjct: 14 HNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHS-HIVSDC-VI 71
Query: 228 SLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADK 287
S D Y+ + D L++ +G GH+ V SV F + ++GS D+
Sbjct: 72 SSDGAYA----LSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDR 127
Query: 288 TVRVWQGSEDGNYDCKHTL--KDHTAEVQAV--TVHATNKYFVTASLDNTWCFYDLSSGI 343
++++W G DCK+T+ K H+ V V + + N V++ D ++LSS
Sbjct: 128 SIKLWNTL--G--DCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSS-- 181
Query: 344 CLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVT 403
C Q G G + PDG + +G + +WD+ ++ + + +
Sbjct: 182 CKLQTDHIGHTGY---INTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAN-DEIH 237
Query: 404 AISFSENGYYLATAAHDGVKLWDLRK 429
A+ FS N Y+L A + ++DL K
Sbjct: 238 ALVFSPNRYWLCAATASSIIIFDLEK 263
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 47/179 (26%), Positives = 83/179 (46%)
Query: 260 TLSGHSKKVTSVKFVTEG-DLFLTGSADKTVRVWQGSEDG-NYDC-KHTLKDHTAEVQAV 316
TL GH+ VTS+ E ++ L+ S DKT+ +W + D +Y K +LK H+ V
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 317 TVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGT 376
+ + Y ++AS D T ++L++G + G S +F D + +G+
Sbjct: 70 VISSDGAYALSASWDKTLRLWELATGTTTRRFV-----GHTNDVLSVSFSADNRQIVSGS 124
Query: 377 SEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGY--YLATAAHDG-VKLWDLRKLK 431
+ +K+W+ + GH V+ + FS N + ++ D VK+W+L K
Sbjct: 125 RDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCK 183
Score = 115 (45.5 bits), Expect = 0.00085, P = 0.00085
Identities = 38/159 (23%), Positives = 72/159 (45%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
VI + G D +++ S ++ T GH+ + +V +G L +G D T +W +E
Sbjct: 164 VIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNE 223
Query: 297 DGNYDCKHTLK-DHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD----A 351
KH + E+ A+ V + N+Y++ A+ ++ +DL + ++
Sbjct: 224 S-----KHLYSLNANDEIHAL-VFSPNRYWLCAATASSIIIFDLEKKSKVDELKPEFAAV 277
Query: 352 GTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
G R S A+ DG L G ++ +++ W V S+A
Sbjct: 278 GKKSREPECISLAWSADGQTLFAGYTDNIIRAWGVMSRA 316
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 199 (75.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 58/206 (28%), Positives = 98/206 (47%)
Query: 233 YSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+S D ++ATG D ++D + +I+ L GH + + S+ F +GD ++GS D++VR
Sbjct: 263 FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVR 322
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
+W C TL V V V K SLD T +D ++G + ++ D
Sbjct: 323 IWDLRTS---QCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL-D 377
Query: 351 AGTD---GRPEGYTSAAFHPDGLILGTGTSEALVKIW------DVKSQANVAKFDGHVGA 401
+G + G + S AF +G + +G+ + VK+W D KS V + GH
Sbjct: 378 SGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVT-YIGHKDF 436
Query: 402 VTAISFSENGYYLATAAHD-GVKLWD 426
V ++ + + Y+ + + D GV WD
Sbjct: 437 VLSVCCTPDNEYILSGSKDRGVIFWD 462
Score = 180 (68.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 83/362 (22%), Positives = 154/362 (42%)
Query: 90 LEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAA 149
L+ +L T +++ + Q + + ++++ + + ++A PA T VTS +
Sbjct: 79 LKNELDTRDRQMKNGFQQQQQQQQ--QQQQQQQQQQQQIVAPPAAP--PAPPTPVTSLSV 134
Query: 150 LSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALER 209
+ + + P + H P + +L A + + KK+ + + A +
Sbjct: 135 IDKSQYI-----VNPTQRANHVKEIPPFLQDLDIAKA--NPEFKKQHLEYYVLYNPAFSK 187
Query: 210 YTQLASHPLHKTSKPGIVSLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTL---SGH 264
L +H +V + +S+D IATG T V F+ +G++V L S +
Sbjct: 188 --DLDIDMVHSLDHSSVVCC-VRFSRDGKFIATGCNKTTQV-FNVTTGELVAKLIDESSN 243
Query: 265 SKK-----------VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEV 313
K + SV F +G L TG+ DK +R+W S L+ H ++
Sbjct: 244 ENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKI---LRGHEQDI 300
Query: 314 QAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG 373
++ V+ S D + +DL + C +S +G T+ A PDG ++
Sbjct: 301 YSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE------DGVTTVAVSPDGKLIA 354
Query: 374 TGTSEALVKIWDVKSQANVAKFD-------GHVGAVTAISFSENGYYLATAAHDG-VKLW 425
G+ + V++WD + V + D GH +V +++FS NG +A+ + D VKLW
Sbjct: 355 AGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Query: 426 DL 427
L
Sbjct: 415 HL 416
Score = 176 (67.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
S+D + D H+L DH++ V V K+ T T F ++++G + ++ D ++
Sbjct: 186 SKDLDIDMVHSL-DHSSVVCCVRFSRDGKFIATGCNKTTQVF-NVTTGELVAKLIDESSN 243
Query: 355 GRPEGYTSAA---------FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
+ T+A+ F PDG +L TG + L++IWD+ ++ + GH + ++
Sbjct: 244 ENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSL 303
Query: 406 SFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADI 464
F +G L + + D V++WDLR + + D T T +V D G +A S D
Sbjct: 304 DFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVT-TVAVSPD--GKLIAAGSLD- 359
Query: 465 RVYQVASVKADWNCIKTFP-DLSGTG---KATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
R +V + + + +G G V F + + IA GS+DR ++++ L G
Sbjct: 360 RTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG 418
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 54/213 (25%), Positives = 81/213 (38%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
I SLD D + +G D + ++D + Q TLS VT+V +G L GS
Sbjct: 300 IYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSL 358
Query: 286 DKTVRVWQGSED---GNYDC-KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
D+TVRVW + D H V +V + + SLD T + L
Sbjct: 359 DRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG 418
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
+ G + S PD + +G+ + V WD S + GH +
Sbjct: 419 KSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNS 478
Query: 402 V--TAISFSENGY--YLATAAHD-GVKLWDLRK 429
V A+S + G AT + D ++W K
Sbjct: 479 VISVAVSLNSKGTEGIFATGSGDCKARIWKWTK 511
Score = 131 (51.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 70/274 (25%), Positives = 118/274 (43%)
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQ---G---------SEDGNYDCKHTLKDHTA 311
HS V V+F +G TG +KT +V+ G S + N D +T
Sbjct: 199 HSSVVCCVRFSRDGKFIATG-CNKTTQVFNVTTGELVAKLIDESSNENKD-DNTTASGDL 256
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+++V K T + D +DLS+ + + G + S F PDG
Sbjct: 257 YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILR-----GHEQDIYSLDFFPDGDR 311
Query: 372 LGTGTSEALVKIWDVK-SQANVAKF--DGHVGAVTAISFSENGYYLATAAHDG-VKLWD- 426
L +G+ + V+IWD++ SQ ++ DG VT ++ S +G +A + D V++WD
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIEDG----VTTVAVSPDGKLIAAGSLDRTVRVWDS 367
Query: 427 ----LRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWN--C 478
L + + + + E SV F ++G +A S D ++++ + K+D C
Sbjct: 368 TTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG-KSDKKSTC 426
Query: 479 IKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNL 512
T+ + C PD +YI GS DR +
Sbjct: 427 EVTYIGHKDFVLSVCCT--PDNEYILSGSKDRGV 458
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 199 (75.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 58/206 (28%), Positives = 98/206 (47%)
Query: 233 YSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
+S D ++ATG D ++D + +I+ L GH + + S+ F +GD ++GS D++VR
Sbjct: 263 FSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVR 322
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
+W C TL V V V K SLD T +D ++G + ++ D
Sbjct: 323 IWDLRTS---QCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL-D 377
Query: 351 AGTD---GRPEGYTSAAFHPDGLILGTGTSEALVKIW------DVKSQANVAKFDGHVGA 401
+G + G + S AF +G + +G+ + VK+W D KS V + GH
Sbjct: 378 SGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVT-YIGHKDF 436
Query: 402 VTAISFSENGYYLATAAHD-GVKLWD 426
V ++ + + Y+ + + D GV WD
Sbjct: 437 VLSVCCTPDNEYILSGSKDRGVIFWD 462
Score = 180 (68.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 83/362 (22%), Positives = 154/362 (42%)
Query: 90 LEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAA 149
L+ +L T +++ + Q + + ++++ + + ++A PA T VTS +
Sbjct: 79 LKNELDTRDRQMKNGFQQQQQQQQ--QQQQQQQQQQQQIVAPPAAP--PAPPTPVTSLSV 134
Query: 150 LSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALER 209
+ + + P + H P + +L A + + KK+ + + A +
Sbjct: 135 IDKSQYI-----VNPTQRANHVKEIPPFLQDLDIAKA--NPEFKKQHLEYYVLYNPAFSK 187
Query: 210 YTQLASHPLHKTSKPGIVSLDIHYSKD--VIATGGVDTNAVLFDRPSGQIVTTL---SGH 264
L +H +V + +S+D IATG T V F+ +G++V L S +
Sbjct: 188 --DLDIDMVHSLDHSSVVCC-VRFSRDGKFIATGCNKTTQV-FNVTTGELVAKLIDESSN 243
Query: 265 SKK-----------VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEV 313
K + SV F +G L TG+ DK +R+W S L+ H ++
Sbjct: 244 ENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKI---LRGHEQDI 300
Query: 314 QAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILG 373
++ V+ S D + +DL + C +S +G T+ A PDG ++
Sbjct: 301 YSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE------DGVTTVAVSPDGKLIA 354
Query: 374 TGTSEALVKIWDVKSQANVAKFD-------GHVGAVTAISFSENGYYLATAAHDG-VKLW 425
G+ + V++WD + V + D GH +V +++FS NG +A+ + D VKLW
Sbjct: 355 AGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLW 414
Query: 426 DL 427
L
Sbjct: 415 HL 416
Score = 176 (67.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 295 SEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTD 354
S+D + D H+L DH++ V V K+ T T F ++++G + ++ D ++
Sbjct: 186 SKDLDIDMVHSL-DHSSVVCCVRFSRDGKFIATGCNKTTQVF-NVTTGELVAKLIDESSN 243
Query: 355 GRPEGYTSAA---------FHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAI 405
+ T+A+ F PDG +L TG + L++IWD+ ++ + GH + ++
Sbjct: 244 ENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSL 303
Query: 406 SFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADI 464
F +G L + + D V++WDLR + + D T T +V D G +A S D
Sbjct: 304 DFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVT-TVAVSPD--GKLIAAGSLD- 359
Query: 465 RVYQVASVKADWNCIKTFP-DLSGTG---KATCVKFGPDAKYIAVGSMDRNLRVFGLPG 519
R +V + + + +G G V F + + IA GS+DR ++++ L G
Sbjct: 360 RTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG 418
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 54/213 (25%), Positives = 81/213 (38%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
I SLD D + +G D + ++D + Q TLS VT+V +G L GS
Sbjct: 300 IYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSL 358
Query: 286 DKTVRVWQGSED---GNYDC-KHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
D+TVRVW + D H V +V + + SLD T + L
Sbjct: 359 DRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG 418
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGA 401
+ G + S PD + +G+ + V WD S + GH +
Sbjct: 419 KSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNS 478
Query: 402 V--TAISFSENGY--YLATAAHD-GVKLWDLRK 429
V A+S + G AT + D ++W K
Sbjct: 479 VISVAVSLNSKGTEGIFATGSGDCKARIWKWTK 511
Score = 131 (51.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 70/274 (25%), Positives = 118/274 (43%)
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQ---G---------SEDGNYDCKHTLKDHTA 311
HS V V+F +G TG +KT +V+ G S + N D +T
Sbjct: 199 HSSVVCCVRFSRDGKFIATG-CNKTTQVFNVTTGELVAKLIDESSNENKD-DNTTASGDL 256
Query: 312 EVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLI 371
+++V K T + D +DLS+ + + G + S F PDG
Sbjct: 257 YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILR-----GHEQDIYSLDFFPDGDR 311
Query: 372 LGTGTSEALVKIWDVK-SQANVAKF--DGHVGAVTAISFSENGYYLATAAHDG-VKLWD- 426
L +G+ + V+IWD++ SQ ++ DG VT ++ S +G +A + D V++WD
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIEDG----VTTVAVSPDGKLIAAGSLDRTVRVWDS 367
Query: 427 ----LRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWN--C 478
L + + + + E SV F ++G +A S D ++++ + K+D C
Sbjct: 368 TTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG-KSDKKSTC 426
Query: 479 IKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNL 512
T+ + C PD +YI GS DR +
Sbjct: 427 EVTYIGHKDFVLSVCCT--PDNEYILSGSKDRGV 458
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 108/420 (25%), Positives = 179/420 (42%)
Query: 77 QNEWDGLMLSNFALEQQLHTA---RQELSHALYQHDA--ACRVIARLKKE--RDEAR--S 127
++E+D L ++ ALE++L QEL A A R+ A +K+ R +AR
Sbjct: 163 KDEYDALQITFNALEEKLRKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQK 222
Query: 128 LLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGIT-PAIIAELTDCNA 186
LA++ ++ +P E A A E + + ++ PA L D
Sbjct: 223 ELAEAAKEPLPVEPDDDIEVLADETSDTAEETSPVRAVSRTPSKRLSQPA--GGLLDSIT 280
Query: 187 ALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIH--------YSKD-- 236
+ +R PP P D E + AS + + I D H +S
Sbjct: 281 NIFGRRSLSSFPP---PQDNAEPHPG-ASKEV-RVPTTAICVFDAHDGEVNAVQFSPGSR 335
Query: 237 VIATGGVDTNA----VLFDR--PSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
++ATGG+D VL DR P G +LSG + +TS++F + G L S D R
Sbjct: 336 LLATGGMDRRVKLWEVLGDRCEPKG----SLSGSNAGITSIEFDSAGSYLLAASNDFASR 391
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSD 350
+W + D N +HTL H+ +V + N V+ S D T +DL S +C +
Sbjct: 392 IW--TVDDNR-LRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCNIKTVF 448
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSEN 410
AG+ T + +G + ++ WD+++++ V + + +G +TA+ +
Sbjct: 449 AGSSCNDIVCTEQC-------VMSGHFDKKIRFWDIRTESIVKELE-LLGRITALDLNSE 500
Query: 411 GYYLATAAHDGV-KLWDLR--KLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVY 467
L T + D + K+ DLR +K S + + V F G+Y+A SAD +Y
Sbjct: 501 RTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALY 560
Score = 140 (54.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 46/130 (35%), Positives = 63/130 (48%)
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDF 450
+ FD H G V A+ FS LAT D VKLW++ + S S S++F
Sbjct: 315 ICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEF 374
Query: 451 DHSGSYLAVASADI--RVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGS 507
D +GSYL AS D R++ V D N ++ L+G +GK KF D I GS
Sbjct: 375 DSAGSYLLAASNDFASRIWTV-----DDNRLRH--TLTGHSGKVLSAKFLLDNARIVSGS 427
Query: 508 MDRNLRVFGL 517
DR L+++ L
Sbjct: 428 HDRTLKLWDL 437
Score = 131 (51.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 57/247 (23%), Positives = 112/247 (45%)
Query: 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
S GI S++ + + D + ++ ++ TL+GHS KV S KF+ + +
Sbjct: 365 SNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIV 424
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+GS D+T+++W + + C +K A + T + ++ D F+D+ +
Sbjct: 425 SGSHDRTLKLW---DLRSKVCN--IKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRT 479
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGH--- 398
+ ++ G T+ + + L T + + L+KI D++ A F
Sbjct: 480 ESIVKELELLGR------ITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFK 533
Query: 399 VGAV-TAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456
G+ T + FS +G Y+A + DG + +W++ K R+ S +P N+V + +G++
Sbjct: 534 CGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHS-SPINAVAWSPAGAH 592
Query: 457 LAVASAD 463
V S D
Sbjct: 593 --VVSVD 597
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 194 (73.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 52/190 (27%), Positives = 85/190 (44%)
Query: 238 IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSED 297
I T D + L+D +G VT+ GH+ V ++ + F++G+ D + ++W E
Sbjct: 157 IVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREG 216
Query: 298 GNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRP 357
CK T H +++ AVT + F T S D T +D+ + L S D
Sbjct: 217 V---CKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQELAMYSH---DNII 270
Query: 358 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATA 417
G TS AF G +L G + +WD GH V+ + +ENG +AT
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATG 330
Query: 418 AHDG-VKLWD 426
+ D +++W+
Sbjct: 331 SWDSFLRVWN 340
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 64/289 (22%), Positives = 114/289 (39%)
Query: 231 IHYSKDV--IATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT 288
+H+ D + + D +++D + V + S V + + G G D
Sbjct: 61 MHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNM 120
Query: 289 VRVWQ-GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
++ + +GN L H + N+ VT+S D + +D+ +G+ +T
Sbjct: 121 CSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQ-IVTSSGDMSCGLWDIETGLQVT- 178
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISF 407
S G G + A P +G +A K+WD++ F GH + A++F
Sbjct: 179 -SFLGHTGDVMALSLA---PQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTF 234
Query: 408 SENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRV 466
NG AT + D +L+D+R + + + SV F SG L D
Sbjct: 235 FPNGQAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 467 YQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++KA+ + I D + +C+ + +A GS D LRV+
Sbjct: 295 NVWDTMKAERSGILAGHD----NRVSCLGVTENGMAVATGSWDSFLRVW 339
Score = 163 (62.4 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 64/258 (24%), Positives = 104/258 (40%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVH 319
TL GH K+ ++ + + ++ S D + VW H + ++ V
Sbjct: 50 TLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTCAYA 106
Query: 320 ATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAA-FHPDGLILGTGTSE 378
+ Y LDN Y+L + +VS G GY S F D I+ T + +
Sbjct: 107 PSGSYVACGGLDNMCSIYNLKTREGNVRVSRE-LPGHG-GYLSCCRFLDDNQIV-TSSGD 163
Query: 379 ALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFE 437
+WD+++ V F GH G V A+S + + A D KLWD+R+ ++F
Sbjct: 164 MSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFP 223
Query: 438 SSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFG 497
+S+ N+V F +G A S D ++ ++AD D G T V F
Sbjct: 224 GHESDI--NAVTFFPNGQAFATGSDDATC-RLFDIRADQELAMYSHDNIICG-ITSVAFS 279
Query: 498 PDAKYIAVGSMDRNLRVF 515
+ + G D N V+
Sbjct: 280 KSGRLLLAGYDDFNCNVW 297
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 196 (74.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 68/300 (22%), Positives = 130/300 (43%)
Query: 237 VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSE 296
V+ + D ++D +G TL GH+ V + F G L + SAD T+++W
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 180
Query: 297 DGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGR 356
++C T+ H V +V + + V+A+ D T +++ +G C+ + G
Sbjct: 181 --GFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFT-----GH 233
Query: 357 PEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFS-ENGY--- 412
E + DG ++ + +++ V++W V ++ A+ H V IS++ E+ Y
Sbjct: 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 413 ----------------YLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGS 455
+L + + D +K+WD+ + D+ V F HSG
Sbjct: 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV--RGVLF-HSGG 350
Query: 456 YLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 515
++ AD + +V K + C+KT + T + F A Y+ GS+D+ ++V+
Sbjct: 351 KFILSCADDKTLRVWDYK-NKRCMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 178 (67.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 52/203 (25%), Positives = 96/203 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
LSGH VT V F + ++ S D T++VW E G+++ TLK HT VQ ++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFE--RTLKGHTDSVQDISFDH 160
Query: 321 TNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ K + S D T +D C+ + G +S A P+G + + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSVAIMPNGDHIVSAARDKT 215
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
+K+W+V++ V F GH V + +++G +A+ ++D V++W + K ++ E
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKA-ELR 273
Query: 440 DSETPTNSVDFDHSGSYLAVASA 462
+ E + + SY +++ A
Sbjct: 274 EHEHVVECISWAPESSYSSISEA 296
Score = 174 (66.3 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 63/261 (24%), Positives = 115/261 (44%)
Query: 227 VSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSAD 286
+S D H K ++A+ D L+D + + T+ GH V+SV + GD ++ + D
Sbjct: 156 ISFD-HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARD 213
Query: 287 KTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---W------CFY 337
KT+++W+ + G Y C T H V+ V + + S D T W C
Sbjct: 214 KTIKMWE-VQTG-Y-CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270
Query: 338 DLSSGI----CLTQVSDAGTDGRPE--GYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN 391
+L C++ ++ E G + G L +G+ + +K+WDV +
Sbjct: 271 ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 392 VAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDS-ETPTNSVD 449
+ GH V + F G ++ + A D +++WD KN R ++ ++ E S+D
Sbjct: 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLD 387
Query: 450 FDHSGSYLAVASAD--IRVYQ 468
F + Y+ S D ++V++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVWE 408
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/175 (26%), Positives = 81/175 (46%)
Query: 355 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYL 414
G T FHP ++ + + +A +K+WD ++ GH +V ISF +G L
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 415 ATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVK 473
A+ + D +KLWD + + R+ D +SV +G ++ A+ D + ++ V+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVAIMPNGDHIVSAARD-KTIKMWEVQ 222
Query: 474 ADWNCIKTFPDLSGTGKATCVKF---GPDAKYIAVGSMDRNLRVFGLPGNDAPSE 525
+ C+KTF TG V+ D IA S D+ +RV+ + + +E
Sbjct: 223 TGY-CVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 50/219 (22%), Positives = 91/219 (41%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
+ S+ I + D I + D +++ +G V T +GH + V V+ +G L + S
Sbjct: 195 VSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+TVRVW + +CK L++H V+ ++ + Y + + G L
Sbjct: 255 DQTVRVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 346 TQVS--------DAGTD-------GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA 390
S D T G FH G + + + +++WD K++
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371
Query: 391 NVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLR 428
+ + H VT++ F + Y+ T + D VK+W+ R
Sbjct: 372 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|Q15269 [details] [associations]
symbol:PWP2 "Periodic tryptophan protein 2 homolog"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471079 GO:GO:0004871
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AP001753 EMBL:AB001517
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:X95263
EMBL:X96424 EMBL:X96425 EMBL:U53346 EMBL:U56085 EMBL:U56089
EMBL:U56086 EMBL:U56087 EMBL:U56088 EMBL:AK314184 EMBL:BC013309
EMBL:BC014988 EMBL:AB001523 IPI:IPI00300078 RefSeq:NP_005040.2
UniGene:Hs.449076 ProteinModelPortal:Q15269 SMR:Q15269
IntAct:Q15269 MINT:MINT-1411448 STRING:Q15269 PhosphoSite:Q15269
DMDM:116242740 SWISS-2DPAGE:Q15269 PaxDb:Q15269 PeptideAtlas:Q15269
PRIDE:Q15269 DNASU:5822 Ensembl:ENST00000291576 GeneID:5822
KEGG:hsa:5822 UCSC:uc002zeb.3 CTD:5822 GeneCards:GC21P045527
H-InvDB:HIX0213175 HGNC:HGNC:9711 HPA:HPA024573 MIM:601475
neXtProt:NX_Q15269 PharmGKB:PA162400451 HOVERGEN:HBG030681
InParanoid:Q15269 OrthoDB:EOG4R7V93 PhylomeDB:Q15269
GenomeRNAi:5822 NextBio:22681 ArrayExpress:Q15269 Bgee:Q15269
CleanEx:HS_PWP2 Genevestigator:Q15269 GermOnline:ENSG00000160220
Uniprot:Q15269
Length = 919
Score = 202 (76.2 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 92/380 (24%), Positives = 160/380 (42%)
Query: 94 LHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNG 153
L++ Q+ ++Q D + RLK LL + E + E G
Sbjct: 203 LYSLSQDGVLCMWQCDTPPEGL-RLKPPAGWKADLLQREEEE--EEEEDQEGDRETTIRG 259
Query: 154 KRAPEDEDLGPAGKKLHTGITPAIIAELTDCN--AALSQQRKKRQVPPALAP-IDALERY 210
K P +E+ GK ++ + + D N A + +K + A I L
Sbjct: 260 KATPAEEE--KTGKVKYSRLAKYFFNKEGDFNNLTAAAFHKKSHLLVTGFASGIFHLHEL 317
Query: 211 TQL-ASHPLHKTSKPGIVSLDIHYSKDVIATGGVDTNAVL-FDRPSGQIVTTLSGHSKKV 268
+ H L S I S+ I+ S D IA G +L ++ S V GH +
Sbjct: 318 PEFNLIHSL-SISDQSIASVAINSSGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNSM 376
Query: 269 TSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTA 328
++ + +G +TG D V+VW + G C T +H++ V VT AT VT+
Sbjct: 377 VALAYSPDGQYIVTGGDDGKVKVWN-TLSGF--CFVTFTEHSSGVTGVTFTATGYVVVTS 433
Query: 329 SLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL-VKIWDVK 387
S+D T +DL + T RP ++ A G I+ G ++ + +W ++
Sbjct: 434 SMDGTVRAFDLHR----YRNFRTFTSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQ 489
Query: 388 SQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTN 446
+ + GH G ++ + F+ LA+A+ D V+LWD+ ++R+ E+ +
Sbjct: 490 TGRLLDVLSGHEGPISGLCFNPMKSVLASASWDKTVRLWDM--FDSWRTKETLALTSDAL 547
Query: 447 SVDFDHSGSYLAVASADIRV 466
+V F G+ LAVA+ + ++
Sbjct: 548 AVTFRPDGAELAVATLNSQI 567
Score = 179 (68.1 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 63/259 (24%), Positives = 114/259 (44%)
Query: 263 GHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATN 322
G +T+ F + L +TG A + + E ++ H+L + +V ++++
Sbjct: 286 GDFNNLTAAAFHKKSHLLVTGFASGIFHLHELPE---FNLIHSLSISDQSIASVAINSSG 342
Query: 323 KY--FVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
+ F + L + S L Q G + A+ PDG + TG +
Sbjct: 343 DWIAFGCSGLGQLLVWEWQSESYVLKQ------QGHFNSMVALAYSPDGQYIVTGGDDGK 396
Query: 381 VKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESS 439
VK+W+ S F H VT ++F+ GY + T++ DG V+ +DL + +NFR+F +S
Sbjct: 397 VKVWNTLSGFCFVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTF-TS 455
Query: 440 DSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGP 498
T + V D SG ++ + D V S++ + LSG G + + F P
Sbjct: 456 PRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTG----RLLDVLSGHEGPISGLCFNP 511
Query: 499 DAKYIAVGSMDRNLRVFGL 517
+A S D+ +R++ +
Sbjct: 512 MKSVLASASWDKTVRLWDM 530
Score = 141 (54.7 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 55/222 (24%), Positives = 90/222 (40%)
Query: 233 YSKD--VIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVR 290
YS D I TGG D +++ SG T + HS VT V F G + +T S D TVR
Sbjct: 381 YSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVR 440
Query: 291 VWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCF-YDLSSGICLTQVS 349
+ N+ + + V V A+ + + D+ F + + +G L +S
Sbjct: 441 AFDLHRYRNF--RTFTSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTGRLLDVLS 498
Query: 350 DAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSE 409
G +G G F+P +L + + + V++WD+ + A++F
Sbjct: 499 --GHEGPISGL---CFNPMKSVLASASWDKTVRLWDMFDSWRTKETLALTSDALAVTFRP 553
Query: 410 NGYYLATAA-HDGVKLWDLRKLKNFRSFESS-DSETPTNSVD 449
+G LA A + + WD S E D +T +D
Sbjct: 554 DGAELAVATLNSQITFWDPENAVQTGSIEGRHDLKTGRKELD 595
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 58/209 (27%), Positives = 105/209 (50%)
Query: 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF 280
T G V L + Y + VI TG D+ ++D +G+++ TL H++ V ++F + G L
Sbjct: 250 TGHTGSV-LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNG-LM 306
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
+T S D+++ VW + + + L H A V V +KY V+AS D T + S
Sbjct: 307 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTS 364
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+ + ++ G G + D L++ +G+S+ +++WD++ A + +GH
Sbjct: 365 TCEFVRTLN-----GHKRGIACLQYR-DRLVV-SGSSDNTIRLWDIECGACLRVLEGHEE 417
Query: 401 AVTAISFSENGYYLATAAHDG-VKLWDLR 428
V I F + + A+DG +K+WDL+
Sbjct: 418 LVRCIRFDNKR--IVSGAYDGKIKVWDLQ 444
Score = 128 (50.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 48/211 (22%), Positives = 90/211 (42%)
Query: 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVT---TLSGHSKKVTSVKFVTEGDLFLTGSA 285
L + +S ++ T D + ++D S +T L GH V V F + ++ S
Sbjct: 297 LHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 354
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+T++VW S + TL H + + ++ V+ S DNT +D+ G CL
Sbjct: 355 DRTIKVWSTS---TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL 409
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN---------VAKFD 396
+ +G E F D + +G + +K+WD+++ + +
Sbjct: 410 RVL-----EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV 462
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWD 426
H G V + F E + + +++HD + +WD
Sbjct: 463 EHSGRVFRLQFDE--FQIISSSHDDTILIWD 491
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 201 (75.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 62/234 (26%), Positives = 111/234 (47%)
Query: 261 LSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHA 320
L GH++ + ++ +G +F++ + DK++RVW+ ++DG C H V AV+
Sbjct: 382 LYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSR 441
Query: 321 TNKYFV-TASLDNT---WCFYD-LSSGICLTQVSDAGT-------DGRPEGYTSAAFHPD 368
+ FV T+S D T W + L+S +S T G + S A P+
Sbjct: 442 LKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSPN 501
Query: 369 GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDL 427
++ TG+ + L K+W + + F GH + + FS LAT++ DG +KLW L
Sbjct: 502 DKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGL 561
Query: 428 RKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKT 481
+ ++FE D+ + F G+ L +D + ++ ++K + C+KT
Sbjct: 562 QDFSCLKTFEGHDASVL--KIIFVSRGTQLLSGGSD-GLLKLWTIKTN-ECVKT 611
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 61/244 (25%), Positives = 113/244 (46%)
Query: 245 TNAVLFDRPSGQIVTTLSGHSKK-VTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK 303
T + D +G ++ +L ++ +TS + ++ +TGS ++ W E+ C
Sbjct: 46 TKLNVIDVETGALLHSLEQDDQEDITSFVLSPDDEVLVTGSRALLLKQWNWRENR---CV 102
Query: 304 HTLKD-HTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTS 362
T K H A V + +T+ T D+T +D+ C + G+ G
Sbjct: 103 RTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLK--GSSGVVH---L 157
Query: 363 AAFHPD--GLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD 420
FHPD L L + + + ++IWD+ S VA DGH AVT+++F+ +G L ++ D
Sbjct: 158 VEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRD 217
Query: 421 GV-KLWDLRKLKNFRS---FESSDSET--PTNSVDFDHSG------SYLAVASADI-RVY 467
+ +W+L+ ++ R+ +ES ++ P DF G +L S + +V+
Sbjct: 218 KICMVWNLKTRESIRTIPIYESVEAAVLLPEQG-DFSQLGVKKQGLHFLTAGSKGVLKVW 276
Query: 468 QVAS 471
+VA+
Sbjct: 277 EVAT 280
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 43/176 (24%), Positives = 70/176 (39%)
Query: 260 TLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCK--HTLKDHTAEVQAVT 317
T GH K + SV L TGS D+ ++W DC H + V
Sbjct: 485 TERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCP-----DCSLLGVFTGHKRGIWCVQ 539
Query: 318 VHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTS 377
++ T+S D T + L CL +G F G L +G S
Sbjct: 540 FSPVDQILATSSADGTLKLWGLQDFSCLKTF-----EGHDASVLKIIFVSRGTQLLSGGS 594
Query: 378 EALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLW-DLRKLK 431
+ L+K+W +K+ V DGH + + ++ + TA+ D + LW D+ +++
Sbjct: 595 DGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDVTEIE 650
Score = 123 (48.4 bits), Expect = 0.00047, P = 0.00047
Identities = 61/269 (22%), Positives = 115/269 (42%)
Query: 235 KDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKT-VRVWQ 293
++ I T V+ N V +D + Q+ L+G++ +V VKF+ GD + + + ++V++
Sbjct: 314 RNEIVTVSVEHNIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKVFE 373
Query: 294 GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNT---WCFYDLSSGICLTQVSD 350
S C+ L HT + A+ V FV+ + D + W +C+ Q
Sbjct: 374 LSTS---HCQ-ILYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQ--G 427
Query: 351 AGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVK----SQANVAKFDG--------- 397
G G S + + ++ T + + +K+W++ S+A A G
Sbjct: 428 LG-HAHGVGAVSCSRLKESFVV-TSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMT 485
Query: 398 ---HVGAVTAISFSENGYYLATAAHDGV-KLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453
H + +++ S N +AT + D + KLW F + + V F
Sbjct: 486 ERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVF--TGHKRGIWCVQFSPV 543
Query: 454 GSYLAVASADIRVYQVASVKADWNCIKTF 482
LA +SAD ++ ++ D++C+KTF
Sbjct: 544 DQILATSSAD-GTLKLWGLQ-DFSCLKTF 570
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 38/163 (23%), Positives = 77/163 (47%)
Query: 226 IVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFLTGSA 285
I S+ + + +IATG D A L+ P ++ +GH + + V+F + T SA
Sbjct: 493 INSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSA 552
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D T+++W G +D + C T + H A V + + ++ D + + + C+
Sbjct: 553 DGTLKLW-GLQD--FSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECV 609
Query: 346 TQVSDAGTDGRPEG-YTSAAFHPDGLILGTGTSEALVKIW-DV 386
+ G + + G +T+ D +++ T +S++ + +W DV
Sbjct: 610 KTLD--GHEDKIWGLHTNKQ---DDMVV-TASSDSSITLWKDV 646
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 91/364 (25%), Positives = 161/364 (44%)
Query: 116 ARLKKERDEARSLLAQSERQIMPAESTAV-TSNAALSNGKRAPEDEDLGPAGKKLHTGIT 174
A+L+KE +A A+ I P + V T +A + G+ +P + K+L
Sbjct: 211 AKLQKELADA----AKEPLPIDPDDDIEVLTEDAGKATGETSPSRQLSRTPSKRLSQPPP 266
Query: 175 PAIIAELTDCNAALSQQRKKRQVP--PALAPIDALERYTQLASHPLHK-TSKPGIVSLDI 231
PA + L + ++R P A + + ++ S LH + G V+ +
Sbjct: 267 PAGL--LDSISNMFGRRRSVNSFSSSPENAEVPSACADVRVPSTALHIFDAHDGEVNA-V 323
Query: 232 HYSKD--VIATGGVDTNAVLFDRPSGQIVT--TLSGHSKKVTSVKFVTEGDLFLTGSADK 287
+S ++ATGG+D L++ SG+ L+G + +TS++F + G L S D
Sbjct: 324 RFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDF 383
Query: 288 TVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQ 347
R+W + D +Y +HTL H+ +V + N V+ S D T +DL S +C +
Sbjct: 384 ASRIW--TVD-DYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCSMK 440
Query: 348 VSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQA-NVAKFDGHVGAVTAIS 406
AG+ T + +G + V+ WD+ Q ++ K + VT++
Sbjct: 441 TVFAGSSCNDIVCTEQC-------VMSGHFDKKVRFWDISYQNYHIQKQLNKLCRVTSLD 493
Query: 407 FSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTN--SVDFDHSGSYLAVASAD 463
+ + L T + D VK+ DLR ++F + + ++ V F GS++A SAD
Sbjct: 494 LNHDRTELLTCSRDDLVKIIDLRTNAVRQTFNAQGFKCGSDFTRVTFSPDGSFVAAGSAD 553
Query: 464 IRVY 467
+Y
Sbjct: 554 GVLY 557
Score = 142 (55.0 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 61/254 (24%), Positives = 106/254 (41%)
Query: 264 HSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNK 323
H +V +V+F L TG D+ V++W+ G + K L A + ++ +
Sbjct: 316 HDGEVNAVRFSPGSRLLATGGMDRRVKLWE-VVSGRCEPKGALTGSNAGITSIEFDSAGS 374
Query: 324 YFVTASLD---NTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEAL 380
Y + AS D W D LT G G+ SA F D + +G+ +
Sbjct: 375 YLLAASNDFASRIWTVDDYRLRHTLT-----GHSGK---VLSARFLLDNARIVSGSYDRT 426
Query: 381 VKIWDVKSQANVAK--FDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFES 438
+K+WD++S+ K F G + I +E ++ V+ WD+ +N+ +
Sbjct: 427 LKLWDLRSKVCSMKTVFAG--SSCNDIVCTEQ-CVMSGHFDKKVRFWDI-SYQNYHIQKQ 482
Query: 439 SDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG--TGKA-TCVK 495
+ S+D +H + L S D V ++ ++ N ++ + G G T V
Sbjct: 483 LNKLCRVTSLDLNHDRTELLTCSRDDLV-KIIDLRT--NAVRQTFNAQGFKCGSDFTRVT 539
Query: 496 FGPDAKYIAVGSMD 509
F PD ++A GS D
Sbjct: 540 FSPDGSFVAAGSAD 553
Score = 141 (54.7 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 60/242 (24%), Positives = 112/242 (46%)
Query: 222 SKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLFL 281
S GI S++ + + D + ++ ++ TL+GHS KV S +F+ + +
Sbjct: 360 SNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIV 419
Query: 282 TGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSS 341
+GS D+T+++W + + C ++K A + T + ++ D F+D+S
Sbjct: 420 SGSYDRTLKLW---DLRSKVC--SMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDISY 474
Query: 342 GICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGH--- 398
Q R TS + D L T + + LVKI D+++ A F+
Sbjct: 475 QNYHIQ-KQLNKLCR---VTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTFNAQGFK 530
Query: 399 VGA-VTAISFSENGYYLATAAHDGVK-LWDLRKLKNFRSFESSDSETPTNSVDFDHSGSY 456
G+ T ++FS +G ++A + DGV LW++ K ++ + S NSV + SG++
Sbjct: 531 CGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSA-INSVSWSLSGAF 589
Query: 457 LA 458
+A
Sbjct: 590 VA 591
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 43/125 (34%), Positives = 61/125 (48%)
Query: 395 FDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHS 453
FD H G V A+ FS LAT D VKLW++ + + S S++FD +
Sbjct: 313 FDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSA 372
Query: 454 GSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNL 512
GSYL AS D ++ +V D+ T L+G +GK +F D I GS DR L
Sbjct: 373 GSYLLAASNDF-ASRIWTVD-DYRLRHT---LTGHSGKVLSARFLLDNARIVSGSYDRTL 427
Query: 513 RVFGL 517
+++ L
Sbjct: 428 KLWDL 432
Score = 122 (48.0 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 48/193 (24%), Positives = 83/193 (43%)
Query: 238 IATGGVDTNAVLFDRPSG--QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGS 295
I +G D L+D S + T +G S V ++G DK VR W S
Sbjct: 418 IVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCN----DIVCTEQCVMSGHFDKKVRFWDIS 473
Query: 296 EDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDG 355
NY + L + V ++ ++ +T S D+ DL + + Q +A
Sbjct: 474 YQ-NYHIQKQL-NKLCRVTSLDLNHDRTELLTCSRDDLVKIIDLRTN-AVRQTFNAQGFK 530
Query: 356 RPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFD-GHVGAVTAISFSENGYYL 414
+T F PDG + G+++ ++ +W+V + D GH A+ ++S+S +G ++
Sbjct: 531 CGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSAINSVSWSLSGAFV 590
Query: 415 ATAAHDGVK--LW 425
A+ G K LW
Sbjct: 591 ASV-EKGSKAVLW 602
Score = 61 (26.5 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 45/198 (22%), Positives = 88/198 (44%)
Query: 77 QNEWDGLMLSNFALEQQLHTA---RQELSHALYQHDA--ACRVIARLKKE--RDEAR--S 127
++E+D L ++ ALE++L QEL A A ++ A +K+ R +A+
Sbjct: 156 RDEYDALQITFSALEEKLRKTTEDNQELVTRWMAEKAQEANKLNAENEKDSRRRQAKLQK 215
Query: 128 LLAQSERQIMPAEST----AVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTD 183
LA + ++ +P + +T +A + G+ +P + K+L PA + L
Sbjct: 216 ELADAAKEPLPIDPDDDIEVLTEDAGKATGETSPSRQLSRTPSKRLSQPPPPAGL--LDS 273
Query: 184 CNAALSQQRKKRQVP--PALAPIDALERYTQLASHPLHK-TSKPGIVSLDIHYSKD--VI 238
+ ++R P A + + ++ S LH + G V+ + +S ++
Sbjct: 274 ISNMFGRRRSVNSFSSSPENAEVPSACADVRVPSTALHIFDAHDGEVNA-VRFSPGSRLL 332
Query: 239 ATGGVDTNAVLFDRPSGQ 256
ATGG+D L++ SG+
Sbjct: 333 ATGGMDRRVKLWEVVSGR 350
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/209 (27%), Positives = 105/209 (50%)
Query: 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF 280
T G V L + Y + VI TG D+ ++D +G+++ TL H++ V ++F + G L
Sbjct: 228 TGHTGSV-LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNG-LM 284
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
+T S D+++ VW + + + L H A V V +KY V+AS D T + S
Sbjct: 285 VTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTS 342
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+ + ++ G G + D L++ +G+S+ +++WD++ A + +GH
Sbjct: 343 TCEFVRTLN-----GHKRGIACLQYR-DRLVV-SGSSDNTIRLWDIECGACLRVLEGHEE 395
Query: 401 AVTAISFSENGYYLATAAHDG-VKLWDLR 428
V I F + + A+DG +K+WDL+
Sbjct: 396 LVRCIRFDNKR--IVSGAYDGKIKVWDLQ 422
Score = 131 (51.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 53/231 (22%), Positives = 97/231 (41%)
Query: 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVT---TLSGHSKKVTSVKFVTEGDLFLTGSA 285
L + +S ++ T D + ++D S +T L GH V V F + ++ S
Sbjct: 275 LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 332
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+T++VW S + TL H + + ++ V+ S DNT +D+ G CL
Sbjct: 333 DRTIKVWSTS---TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL 387
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN---------VAKFD 396
+ +G E F D + +G + +K+WD+++ + +
Sbjct: 388 RVL-----EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV 440
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES-SDSETPT 445
H G V + F E + + +++HD + +WD + E+ S S T T
Sbjct: 441 EHSGRVFRLQFDE--FQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYT 489
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 41/174 (23%), Positives = 81/174 (46%)
Query: 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQA 315
Q + S +SK V +++ + D ++G D ++++W S + +C L HT V
Sbjct: 182 QRIQCRSENSKGVYCLQY--DDDKIISGLRDNSIKIWDKS---SLECLKVLTGHTGSV-- 234
Query: 316 VTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
+ + + VT S D+T +D+++G L + E F +GL++ T
Sbjct: 235 LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHN-----EAVLHLRFS-NGLMV-TC 287
Query: 376 TSEALVKIWDVKSQANVAK---FDGHVGAVTAISFSENGYYLATAAHDG-VKLW 425
+ + + +WD+ S ++ GH AV + F + Y+ +A+ D +K+W
Sbjct: 288 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVW 339
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 58/209 (27%), Positives = 105/209 (50%)
Query: 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF 280
T G V L + Y + VI TG D+ ++D +G+++ TL H++ V ++F + G L
Sbjct: 245 TGHTGSV-LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNG-LM 301
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
+T S D+++ VW + + + L H A V V +KY V+AS D T + S
Sbjct: 302 VTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTS 359
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+ + ++ G G + D L++ +G+S+ +++WD++ A + +GH
Sbjct: 360 TCEFVRTLN-----GHKRGIACLQYR-DRLVV-SGSSDNTIRLWDIECGACLRVLEGHEE 412
Query: 401 AVTAISFSENGYYLATAAHDG-VKLWDLR 428
V I F + + A+DG +K+WDL+
Sbjct: 413 LVRCIRFDNKR--IVSGAYDGKIKVWDLQ 439
Score = 131 (51.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 53/231 (22%), Positives = 97/231 (41%)
Query: 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVT---TLSGHSKKVTSVKFVTEGDLFLTGSA 285
L + +S ++ T D + ++D S +T L GH V V F + ++ S
Sbjct: 292 LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 349
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+T++VW S + TL H + + ++ V+ S DNT +D+ G CL
Sbjct: 350 DRTIKVWSTS---TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL 404
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN---------VAKFD 396
+ +G E F D + +G + +K+WD+++ + +
Sbjct: 405 RVL-----EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV 457
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES-SDSETPT 445
H G V + F E + + +++HD + +WD + E+ S S T T
Sbjct: 458 EHSGRVFRLQFDE--FQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYT 506
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 58/209 (27%), Positives = 105/209 (50%)
Query: 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF 280
T G V L + Y + VI TG D+ ++D +G+++ TL H++ V ++F + G L
Sbjct: 245 TGHTGSV-LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNG-LM 301
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
+T S D+++ VW + + + L H A V V +KY V+AS D T + S
Sbjct: 302 VTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTS 359
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+ + ++ G G + D L++ +G+S+ +++WD++ A + +GH
Sbjct: 360 TCEFVRTLN-----GHKRGIACLQYR-DRLVV-SGSSDNTIRLWDIECGACLRVLEGHEE 412
Query: 401 AVTAISFSENGYYLATAAHDG-VKLWDLR 428
V I F + + A+DG +K+WDL+
Sbjct: 413 LVRCIRFDNKR--IVSGAYDGKIKVWDLQ 439
Score = 131 (51.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 53/231 (22%), Positives = 97/231 (41%)
Query: 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVT---TLSGHSKKVTSVKFVTEGDLFLTGSA 285
L + +S ++ T D + ++D S +T L GH V V F + ++ S
Sbjct: 292 LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 349
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+T++VW S + TL H + + ++ V+ S DNT +D+ G CL
Sbjct: 350 DRTIKVWSTS---TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL 404
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN---------VAKFD 396
+ +G E F D + +G + +K+WD+++ + +
Sbjct: 405 RVL-----EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV 457
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES-SDSETPT 445
H G V + F E + + +++HD + +WD + E+ S S T T
Sbjct: 458 EHSGRVFRLQFDE--FQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYT 506
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 197 (74.4 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 58/209 (27%), Positives = 105/209 (50%)
Query: 221 TSKPGIVSLDIHYSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGDLF 280
T G V L + Y + VI TG D+ ++D +G+++ TL H++ V ++F + G L
Sbjct: 262 TGHTGSV-LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRF-SNG-LM 318
Query: 281 LTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLS 340
+T S D+++ VW + + + L H A V V +KY V+AS D T + S
Sbjct: 319 VTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTS 376
Query: 341 SGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVG 400
+ + ++ G G + D L++ +G+S+ +++WD++ A + +GH
Sbjct: 377 TCEFVRTLN-----GHKRGIACLQYR-DRLVV-SGSSDNTIRLWDIECGACLRVLEGHEE 429
Query: 401 AVTAISFSENGYYLATAAHDG-VKLWDLR 428
V I F + + A+DG +K+WDL+
Sbjct: 430 LVRCIRFDNKR--IVSGAYDGKIKVWDLQ 456
Score = 131 (51.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 53/231 (22%), Positives = 97/231 (41%)
Query: 229 LDIHYSKDVIATGGVDTNAVLFDRPSGQIVT---TLSGHSKKVTSVKFVTEGDLFLTGSA 285
L + +S ++ T D + ++D S +T L GH V V F + ++ S
Sbjct: 309 LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 366
Query: 286 DKTVRVWQGSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICL 345
D+T++VW S + TL H + + ++ V+ S DNT +D+ G CL
Sbjct: 367 DRTIKVWSTS---TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL 421
Query: 346 TQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQAN---------VAKFD 396
+ +G E F D + +G + +K+WD+++ + +
Sbjct: 422 RVL-----EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV 474
Query: 397 GHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFES-SDSETPT 445
H G V + F E + + +++HD + +WD + E+ S S T T
Sbjct: 475 EHSGRVFRLQFDE--FQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYT 523
Score = 118 (46.6 bits), Expect = 0.00093, P = 0.00093
Identities = 41/174 (23%), Positives = 81/174 (46%)
Query: 256 QIVTTLSGHSKKVTSVKFVTEGDLFLTGSADKTVRVWQGSEDGNYDCKHTLKDHTAEVQA 315
Q + S +SK V +++ + D ++G D ++++W S + +C L HT V
Sbjct: 216 QRIQCRSENSKGVYCLQY--DDDKIISGLRDNSIKIWDKS---SLECLKVLTGHTGSV-- 268
Query: 316 VTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTG 375
+ + + VT S D+T +D+++G L + E F +GL++ T
Sbjct: 269 LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHN-----EAVLHLRFS-NGLMV-TC 321
Query: 376 TSEALVKIWDVKSQANVAK---FDGHVGAVTAISFSENGYYLATAAHDG-VKLW 425
+ + + +WD+ S ++ GH AV + F + Y+ +A+ D +K+W
Sbjct: 322 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVW 373
WARNING: HSPs involving 1034 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 526 526 0.00091 119 3 11 22 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1284
No. of states in DFA: 617 (66 KB)
Total size of DFA: 301 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.40u 0.11s 48.51t Elapsed: 00:00:02
Total cpu time: 48.53u 0.11s 48.64t Elapsed: 00:00:03
Start: Sat May 11 02:02:04 2013 End: Sat May 11 02:02:07 2013
WARNINGS ISSUED: 2