Query 009765
Match_columns 526
No_of_seqs 134 out of 657
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 17:03:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009765.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009765hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 4E-113 9E-118 925.6 53.4 506 4-522 21-597 (612)
2 PLN02247 indole-3-acetic acid- 100.0 3E-111 7E-116 912.9 53.2 508 4-522 10-594 (606)
3 PLN02249 indole-3-acetic acid- 100.0 5E-106 1E-110 880.2 52.8 508 5-523 21-587 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 2E-101 5E-106 841.4 42.7 461 7-508 2-527 (528)
5 COG1541 PaaK Coenzyme F390 syn 100.0 4.8E-34 1E-38 298.6 25.9 396 10-505 14-435 (438)
6 TIGR03335 F390_ftsA coenzyme F 100.0 2.7E-30 5.9E-35 278.0 21.9 395 11-482 6-432 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.9 8.7E-26 1.9E-30 240.9 25.6 382 15-481 5-410 (422)
8 TIGR02304 aden_form_hyp probab 99.9 2E-23 4.4E-28 222.5 26.4 318 15-428 21-377 (430)
9 PRK00174 acetyl-CoA synthetase 99.4 1.4E-10 3E-15 130.4 30.4 226 243-514 367-632 (637)
10 TIGR02188 Ac_CoA_lig_AcsA acet 99.4 5.2E-10 1.1E-14 125.4 30.1 227 243-514 358-625 (625)
11 PRK06060 acyl-CoA synthetase; 99.3 4.2E-10 9.1E-15 128.0 24.9 129 243-394 260-410 (705)
12 PRK06187 long-chain-fatty-acid 99.3 1.1E-10 2.5E-15 126.4 19.3 269 88-430 165-468 (521)
13 PRK09274 peptide synthase; Pro 99.3 9E-10 2E-14 121.2 25.6 177 184-394 250-465 (552)
14 PTZ00237 acetyl-CoA synthetase 99.3 5.7E-10 1.2E-14 125.9 22.9 229 243-513 380-643 (647)
15 PLN02654 acetate-CoA ligase 99.2 5.4E-09 1.2E-13 118.4 30.6 225 243-513 397-662 (666)
16 PRK07788 acyl-CoA synthetase; 99.2 1.2E-10 2.6E-15 128.3 16.4 168 184-394 283-472 (549)
17 PRK13295 cyclohexanecarboxylat 99.2 1.2E-09 2.6E-14 120.3 24.1 154 242-429 311-491 (547)
18 PRK04319 acetyl-CoA synthetase 99.2 3E-09 6.5E-14 117.8 26.5 129 242-394 322-477 (570)
19 PRK05677 long-chain-fatty-acid 99.2 2.9E-09 6.4E-14 117.7 26.2 127 243-393 326-477 (562)
20 PRK06145 acyl-CoA synthetase; 99.2 5.9E-10 1.3E-14 120.8 19.6 130 243-394 264-418 (497)
21 PRK06334 long chain fatty acid 99.2 9.1E-10 2E-14 121.4 21.3 130 243-394 299-455 (539)
22 PLN02574 4-coumarate--CoA liga 99.2 2.4E-09 5.3E-14 118.4 24.4 169 185-394 281-475 (560)
23 PRK07514 malonyl-CoA synthase; 99.2 4.9E-09 1.1E-13 113.6 25.4 132 240-394 266-422 (504)
24 TIGR03205 pimA dicarboxylate-- 99.2 7.5E-10 1.6E-14 121.7 19.3 156 243-429 312-493 (541)
25 PRK06155 crotonobetaine/carnit 99.2 5.2E-09 1.1E-13 115.4 25.2 127 244-394 295-445 (542)
26 PRK10524 prpE propionyl-CoA sy 99.2 1.4E-08 2.9E-13 114.1 28.5 229 243-513 355-625 (629)
27 TIGR01734 D-ala-DACP-lig D-ala 99.2 5E-09 1.1E-13 113.5 24.1 131 241-394 256-418 (502)
28 PRK05605 long-chain-fatty-acid 99.2 3.9E-09 8.5E-14 116.8 23.6 158 243-430 336-518 (573)
29 PRK07786 long-chain-fatty-acid 99.2 7.8E-10 1.7E-14 121.7 17.8 125 250-394 294-444 (542)
30 TIGR02316 propion_prpE propion 99.2 4E-08 8.7E-13 110.4 31.7 227 243-513 354-624 (628)
31 PRK07656 long-chain-fatty-acid 99.2 1.2E-09 2.5E-14 118.6 18.5 128 243-393 281-436 (513)
32 PRK09088 acyl-CoA synthetase; 99.1 1.3E-08 2.9E-13 110.0 26.3 158 243-430 252-434 (488)
33 PRK04813 D-alanine--poly(phosp 99.1 9.6E-09 2.1E-13 111.1 24.7 130 242-394 259-420 (503)
34 PRK06164 acyl-CoA synthetase; 99.1 1.5E-08 3.3E-13 111.2 26.2 134 269-429 319-477 (540)
35 PRK12406 long-chain-fatty-acid 99.1 5.7E-09 1.2E-13 113.7 22.7 155 243-430 271-452 (509)
36 PRK07529 AMP-binding domain pr 99.1 1.5E-08 3.3E-13 114.0 26.7 134 242-393 332-489 (632)
37 PRK08316 acyl-CoA synthetase; 99.1 4.9E-09 1.1E-13 114.0 21.7 130 243-394 286-440 (523)
38 PRK03584 acetoacetyl-CoA synth 99.1 8.1E-09 1.8E-13 116.5 23.9 226 243-513 383-648 (655)
39 PRK08974 long-chain-fatty-acid 99.1 3.5E-09 7.7E-14 116.8 20.1 128 243-394 325-477 (560)
40 PRK13382 acyl-CoA synthetase; 99.1 2.3E-09 5E-14 118.0 18.3 168 184-394 272-461 (537)
41 PRK06839 acyl-CoA synthetase; 99.1 1.6E-08 3.4E-13 109.4 24.5 127 243-394 264-416 (496)
42 PRK08314 long-chain-fatty-acid 99.1 1.7E-08 3.8E-13 110.7 24.6 131 242-394 304-461 (546)
43 TIGR03208 cyc_hxne_CoA_lg cycl 99.1 1.3E-08 2.9E-13 111.7 23.4 127 243-394 310-462 (538)
44 PRK07638 acyl-CoA synthetase; 99.1 3.8E-08 8.3E-13 106.5 26.4 125 250-394 258-406 (487)
45 PRK13383 acyl-CoA synthetase; 99.1 6.7E-09 1.4E-13 113.5 20.6 155 242-429 291-468 (516)
46 PLN02330 4-coumarate--CoA liga 99.1 1.3E-08 2.8E-13 112.2 22.9 119 257-394 317-462 (546)
47 PRK05852 acyl-CoA synthetase; 99.1 3E-08 6.5E-13 108.8 25.6 131 241-393 293-452 (534)
48 PRK06710 long-chain-fatty-acid 99.1 1.4E-08 3E-13 112.2 22.3 129 243-394 323-476 (563)
49 PRK07059 Long-chain-fatty-acid 99.1 2.3E-08 5E-13 110.3 23.9 124 250-394 331-480 (557)
50 PRK08633 2-acyl-glycerophospho 99.1 2.9E-08 6.4E-13 118.5 26.6 130 242-394 897-1064(1146)
51 PRK07867 acyl-CoA synthetase; 99.1 2.3E-08 5.1E-13 109.9 23.7 123 250-394 271-426 (529)
52 PRK10252 entF enterobactin syn 99.1 3.3E-09 7.2E-14 128.3 18.3 242 89-394 597-882 (1296)
53 PLN02246 4-coumarate--CoA liga 99.1 3.5E-08 7.5E-13 108.4 24.5 130 243-394 298-457 (537)
54 TIGR02262 benz_CoA_lig benzoat 99.1 1.4E-08 3E-13 110.5 21.2 128 244-394 279-429 (508)
55 PRK12583 acyl-CoA synthetase; 99.1 4.5E-08 9.7E-13 107.7 25.3 157 242-429 316-500 (558)
56 PRK07470 acyl-CoA synthetase; 99.0 1.8E-08 3.9E-13 110.2 22.0 128 242-393 279-438 (528)
57 PRK07787 acyl-CoA synthetase; 99.0 5.4E-08 1.2E-12 105.1 25.3 128 243-393 241-395 (471)
58 PRK12492 long-chain-fatty-acid 99.0 4.1E-08 8.8E-13 108.7 24.7 127 243-393 333-485 (562)
59 PRK10946 entE enterobactin syn 99.0 4.7E-08 1E-12 107.5 24.8 127 243-393 300-453 (536)
60 TIGR01733 AA-adenyl-dom amino 99.0 2.4E-08 5.1E-13 104.9 21.5 131 242-393 233-399 (408)
61 PLN03051 acyl-activating enzym 99.0 8.5E-08 1.8E-12 104.7 26.5 41 349-393 358-401 (499)
62 TIGR02275 DHB_AMP_lig 2,3-dihy 99.0 1.4E-08 2.9E-13 111.4 19.2 129 243-394 299-453 (527)
63 TIGR01217 ac_ac_CoA_syn acetoa 99.0 7.6E-08 1.6E-12 108.8 25.7 227 243-513 384-646 (652)
64 PRK08315 AMP-binding domain pr 99.0 5.8E-08 1.3E-12 106.9 23.6 130 243-394 315-472 (559)
65 PRK08751 putative long-chain f 99.0 4.4E-08 9.5E-13 108.1 22.5 130 242-394 328-482 (560)
66 TIGR03098 ligase_PEP_1 acyl-Co 99.0 1.3E-07 2.8E-12 102.8 25.6 119 257-394 288-439 (515)
67 PLN02860 o-succinylbenzoate-Co 99.0 5.1E-09 1.1E-13 115.9 14.5 58 333-394 382-459 (563)
68 PRK05857 acyl-CoA synthetase; 98.9 8.9E-08 1.9E-12 105.5 22.7 170 184-393 248-446 (540)
69 COG0365 Acs Acyl-coenzyme A sy 98.9 4.4E-07 9.6E-12 99.4 27.5 184 241-475 288-501 (528)
70 PRK06188 acyl-CoA synthetase; 98.9 4.3E-08 9.4E-13 107.1 19.9 128 243-393 281-437 (524)
71 PRK13390 acyl-CoA synthetase; 98.9 3.7E-08 8.1E-13 107.0 19.0 126 243-393 270-423 (501)
72 PRK07768 long-chain-fatty-acid 98.9 1.4E-07 3.1E-12 103.7 23.6 126 330-480 380-527 (545)
73 COG0318 CaiC Acyl-CoA syntheta 98.9 1.5E-07 3.2E-12 104.0 23.6 125 250-394 295-446 (534)
74 PLN02387 long-chain-fatty-acid 98.9 6.4E-08 1.4E-12 110.3 20.7 130 244-393 421-580 (696)
75 PRK07798 acyl-CoA synthetase; 98.9 1.5E-07 3.2E-12 102.6 22.7 130 243-394 296-453 (533)
76 PRK06087 short chain acyl-CoA 98.9 1.8E-07 3.9E-12 103.0 23.4 155 243-429 302-482 (547)
77 PRK12467 peptide synthase; Pro 98.9 5.2E-08 1.1E-12 129.1 22.4 240 88-394 3235-3516(3956)
78 PRK12467 peptide synthase; Pro 98.9 1.7E-08 3.8E-13 133.5 17.8 235 88-393 654-934 (3956)
79 PRK08279 long-chain-acyl-CoA s 98.9 3.4E-08 7.5E-13 110.1 17.6 138 243-393 314-483 (600)
80 PRK05851 long-chain-fatty-acid 98.9 1.6E-07 3.4E-12 103.1 22.2 59 331-394 367-440 (525)
81 PRK07769 long-chain-fatty-acid 98.9 1.8E-07 4E-12 105.0 23.0 61 329-394 411-508 (631)
82 PRK03640 O-succinylbenzoic aci 98.9 2.3E-07 5.1E-12 100.0 22.7 60 330-393 326-404 (483)
83 PRK05620 long-chain-fatty-acid 98.9 1.1E-07 2.5E-12 105.4 20.8 41 350-394 432-475 (576)
84 PLN02614 long-chain acyl-CoA s 98.9 7E-08 1.5E-12 109.5 19.1 131 243-393 386-541 (666)
85 TIGR01923 menE O-succinylbenzo 98.9 7.7E-08 1.7E-12 102.3 17.8 55 335-393 291-364 (436)
86 PRK05850 acyl-CoA synthetase; 98.9 1.4E-06 2.9E-11 96.7 28.3 127 329-480 390-550 (578)
87 PRK08008 caiC putative crotono 98.9 3.1E-07 6.8E-12 100.1 22.7 144 257-430 301-471 (517)
88 PLN03102 acyl-activating enzym 98.9 1.6E-07 3.5E-12 104.6 20.6 57 334-394 390-465 (579)
89 PRK08308 acyl-CoA synthetase; 98.9 9.5E-08 2.1E-12 101.5 17.9 56 333-394 278-336 (414)
90 PRK12316 peptide synthase; Pro 98.8 1.7E-07 3.6E-12 126.6 24.1 241 88-394 4692-4974(5163)
91 PRK12316 peptide synthase; Pro 98.8 1.4E-07 2.9E-12 127.5 23.2 241 88-394 2144-2426(5163)
92 PRK07008 long-chain-fatty-acid 98.8 2E-07 4.4E-12 102.6 20.8 131 242-393 292-453 (539)
93 PRK08276 long-chain-fatty-acid 98.8 1.1E-06 2.3E-11 95.6 26.1 127 243-394 262-414 (502)
94 PF00501 AMP-binding: AMP-bind 98.8 6.1E-08 1.3E-12 102.4 15.9 115 241-376 275-412 (417)
95 TIGR03443 alpha_am_amid L-amin 98.8 2.7E-08 5.9E-13 121.4 14.5 41 349-393 679-722 (1389)
96 PRK05691 peptide synthase; Val 98.8 6.4E-08 1.4E-12 129.2 18.9 130 243-394 3983-4147(4334)
97 PLN02736 long-chain acyl-CoA s 98.8 6.4E-08 1.4E-12 109.3 16.2 131 244-394 377-533 (651)
98 PRK13388 acyl-CoA synthetase; 98.8 1E-06 2.3E-11 97.1 24.9 124 257-394 277-425 (540)
99 PRK08043 bifunctional acyl-[ac 98.8 7E-07 1.5E-11 102.1 24.3 42 349-394 592-636 (718)
100 PRK08180 feruloyl-CoA synthase 98.8 4.6E-07 1E-11 101.6 22.1 28 89-117 208-235 (614)
101 PLN03052 acetate--CoA ligase; 98.8 1.5E-06 3.3E-11 99.7 26.7 41 350-394 591-634 (728)
102 PRK09192 acyl-CoA synthetase; 98.8 2.5E-06 5.5E-11 94.8 27.7 60 330-394 405-483 (579)
103 PRK12476 putative fatty-acid-- 98.8 8.8E-07 1.9E-11 99.3 23.9 129 329-480 422-588 (612)
104 PRK06018 putative acyl-CoA syn 98.8 4.5E-07 9.8E-12 99.8 20.7 55 335-393 383-454 (542)
105 PRK05691 peptide synthase; Val 98.8 1.1E-07 2.4E-12 127.1 17.8 131 242-394 1387-1550(4334)
106 PRK13391 acyl-CoA synthetase; 98.8 2.3E-06 4.9E-11 93.4 24.9 125 244-394 276-427 (511)
107 PRK06814 acylglycerophosphoeth 98.7 1.3E-06 2.9E-11 104.7 24.1 124 243-394 907-1055(1140)
108 PTZ00342 acyl-CoA synthetase; 98.7 8E-07 1.7E-11 102.0 21.0 129 243-393 461-615 (746)
109 PLN02861 long-chain-fatty-acid 98.7 2.5E-07 5.5E-12 104.8 16.5 127 250-393 387-538 (660)
110 PRK06178 acyl-CoA synthetase; 98.7 5.7E-07 1.2E-11 99.5 18.4 147 257-430 341-515 (567)
111 PRK12582 acyl-CoA synthetase; 98.7 3.8E-07 8.3E-12 102.5 17.1 57 332-388 419-496 (624)
112 KOG1175 Acyl-CoA synthetase [L 98.7 2.2E-06 4.8E-11 94.8 21.5 225 250-514 363-623 (626)
113 PF04443 LuxE: Acyl-protein sy 98.7 3.9E-06 8.5E-11 88.3 22.5 295 17-386 28-362 (365)
114 PRK07824 O-succinylbenzoic aci 98.6 4.1E-06 9E-11 87.1 21.7 41 349-394 235-278 (358)
115 PRK07445 O-succinylbenzoic aci 98.6 1.4E-06 3E-11 94.2 18.6 58 333-394 298-369 (452)
116 PRK08162 acyl-CoA synthetase; 98.6 6.1E-06 1.3E-10 90.7 23.6 56 335-394 387-461 (545)
117 PLN02430 long-chain-fatty-acid 98.6 6.8E-07 1.5E-11 101.3 16.3 126 250-393 387-538 (660)
118 COG1021 EntE Peptide arylation 98.6 5.1E-07 1.1E-11 93.3 11.6 117 257-394 319-459 (542)
119 KOG1176 Acyl-CoA synthetase [L 98.5 1.2E-05 2.7E-10 88.4 21.1 129 243-394 299-453 (537)
120 PTZ00216 acyl-CoA synthetase; 98.5 2.3E-06 4.9E-11 97.7 15.7 59 332-394 503-582 (700)
121 COG1022 FAA1 Long-chain acyl-C 98.4 2.8E-06 6.2E-11 94.5 13.5 115 250-393 357-494 (613)
122 PRK09029 O-succinylbenzoic aci 98.4 5.3E-05 1.2E-09 81.5 22.5 41 349-394 333-376 (458)
123 PLN02479 acetate-CoA ligase 98.4 3.5E-05 7.5E-10 85.5 21.5 55 335-393 401-474 (567)
124 TIGR02372 4_coum_CoA_lig 4-cou 98.2 4.3E-05 9.4E-10 81.2 17.6 42 349-394 276-320 (386)
125 KOG1177 Long chain fatty acid 98.2 3.3E-06 7.1E-11 89.2 8.6 61 330-394 426-506 (596)
126 KOG1179 Very long-chain acyl-C 98.2 0.00013 2.8E-09 78.8 20.0 227 250-504 362-625 (649)
127 PRK07868 acyl-CoA synthetase; 98.1 4.5E-05 9.8E-10 90.6 16.5 139 243-394 720-881 (994)
128 KOG1256 Long-chain acyl-CoA sy 98.1 0.00014 2.9E-09 81.1 18.0 132 240-393 416-572 (691)
129 KOG1180 Acyl-CoA synthetase [L 97.5 0.0054 1.2E-07 66.5 17.7 144 244-416 403-574 (678)
130 PF14535 AMP-binding_C_2: AMP- 97.1 0.00063 1.4E-08 57.9 4.8 84 379-481 1-84 (96)
131 COG1020 EntF Non-ribosomal pep 96.6 0.012 2.6E-07 66.2 11.1 59 330-392 561-639 (642)
132 PRK09188 serine/threonine prot 86.0 6.8 0.00015 41.5 11.1 40 349-394 210-252 (365)
133 PF11454 DUF3016: Protein of u 74.2 4.9 0.00011 36.7 4.4 44 331-376 47-96 (141)
134 PF07311 Dodecin: Dodecin; In 50.1 40 0.00087 26.7 4.9 48 380-428 13-60 (66)
135 PF01797 Y1_Tnp: Transposase I 35.6 1.5E+02 0.0033 25.3 7.0 43 377-430 18-60 (121)
136 KOG1178 Non-ribosomal peptide 31.5 72 0.0016 38.4 5.4 42 349-394 455-499 (1032)
137 cd04931 ACT_PAH ACT domain of 31.4 2.8E+02 0.006 23.2 7.5 58 384-453 25-82 (90)
138 PF08990 Docking: Erythronolid 24.3 97 0.0021 20.1 2.7 24 2-25 1-25 (27)
139 PF12690 BsuPI: Intracellular 23.8 56 0.0012 26.8 2.0 26 331-356 20-47 (82)
140 PTZ00297 pantothenate kinase; 22.8 86 0.0019 39.4 4.1 28 366-393 850-881 (1452)
141 PF09926 DUF2158: Uncharacteri 21.9 80 0.0017 23.8 2.3 16 350-368 1-16 (53)
142 TIGR02778 ligD_pol DNA polymer 21.7 62 0.0013 32.4 2.2 43 91-135 147-190 (245)
143 PF12401 DUF3662: Protein of u 21.3 90 0.0019 27.4 2.9 84 379-479 21-107 (116)
144 COG2026 RelE Cytotoxic transla 21.0 1.4E+02 0.0031 24.8 3.9 30 337-366 43-72 (90)
145 cd04861 LigD_Pol_like LigD_Pol 20.7 67 0.0015 31.7 2.1 43 91-135 131-174 (227)
146 cd04865 LigD_Pol_like_2 LigD_P 20.5 67 0.0015 31.8 2.1 44 90-135 131-175 (228)
147 cd04866 LigD_Pol_like_3 LigD_P 20.3 77 0.0017 31.2 2.4 22 90-112 125-146 (223)
148 PF13933 HRXXH: Putative pepti 20.3 2.8E+02 0.0062 27.7 6.3 44 3-46 51-94 (245)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=4.3e-113 Score=925.64 Aligned_cols=506 Identities=32% Similarity=0.630 Sum_probs=465.4
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCchhhhh-hcCCCCCCChhhHhhcCCCcchhhhhHHHHHHhCCCCCCC
Q 009765 4 DEDILKKLEDSTKNATRHQLETLQSILERQSGVRYLQPY-LSGCCAPIDAATYKRTVPLSCYDDYADHINQLAGGDHGQN 82 (526)
Q Consensus 4 ~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~t~ygr~~-f~~i~~~~s~~df~~~vPl~~y~d~~~~ier~~~Ge~~~~ 82 (526)
+++.++.||..++|+.++|+++|++||++|++|+|||+| |++| +++++||++|||++|+|++|||+|+++|+.
T Consensus 21 ~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~~f~~i---~~~~~F~~~VPv~~Yedl~pyI~Ri~~Ge~--- 94 (612)
T PLN02620 21 NKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGR---TDRETFKKVMPVITYEDIQPDINRIANGDT--- 94 (612)
T ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCC---CCHHHHHHhCCCccHHHhHHHHHHHHcCCC---
Confidence 366789999999999999999999999999999999999 9999 999999999999999999999999999987
Q ss_pred CCCCccCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeccCCccccCCce
Q 009765 83 DQPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVNKILFFIYSDNKTTTKAGFK 162 (526)
Q Consensus 83 ~~~~l~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~gip 162 (526)
++|||++||.+|..|||||+|++|+||+|+++++.++. +..+|...++++ .|++..||.||+++......|++|||
T Consensus 95 -s~vL~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~--~~~~~~~~~~~~-~p~l~~Gk~~~~~~~~~~~~T~~Gip 170 (612)
T PLN02620 95 -SPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSL--LYSLLMPVMSQF-VPGLEKGKGMYFLFIKSEAKTPGGLV 170 (612)
T ss_pred -CCccCCCChhhhhhcCCCCCCceeeeecCHHHHHHHHH--HHHHHHHHHHhh-CCCcccCcEEEEEecccCccCCCCcc
Confidence 79999999999999999998899999999999988655 566777776664 38888999999998888899999999
Q ss_pred eeeccchhHH------------------------------------------------------HHHHHHhhhHHHHHHH
Q 009765 163 VMAASAFPLQ------------------------------------------------------GLIGAFSFFESKWEQL 188 (526)
Q Consensus 163 ~g~~s~~~~~------------------------------------------------------~ll~~~~~l~~~w~~l 188 (526)
+|++++.+|+ .++.+++.|+++|++|
T Consensus 171 ~g~~st~~y~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~~L 250 (612)
T PLN02620 171 ARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLL 250 (612)
T ss_pred cccccchhhhhhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHHHH
Confidence 9999987555 6778889999999999
Q ss_pred HHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCCCceEEEEecCchhhhHHHHHHHhC
Q 009765 189 CDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYAG 268 (526)
Q Consensus 189 ~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g 268 (526)
|+||+.|+++.++++|.+|.++++++ +|+|++|+.|+++|.+.+|.|++++||||+++|+||++|+|++|++.|+.|+|
T Consensus 251 ~~DI~~G~ls~~itd~~~R~av~~~L-~p~pelA~~i~~~c~~~~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~g 329 (612)
T PLN02620 251 CRDIRTGTIDSQITDPSVREAVMKIL-KPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSN 329 (612)
T ss_pred HHHHhcCCCCccCCCHHHHHHHHhhc-CCCHHHHHHHHHHhccccccCcHHHhCCCCcEEEEECCCCHHHHHHHHHHHcC
Confidence 99999999999999999999999999 79999999999999988999999999999999999999999999999999999
Q ss_pred CCCeeccccccCCceeeeecCCCCCCCCcceecCCCceEEEeeeCCCCCc------------cccCCceeccccccCCce
Q 009765 269 EVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKN------------EAVGEETVDFSGVEIGKM 336 (526)
Q Consensus 269 ~v~v~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~------------~~~~~~~l~l~ele~G~~ 336 (526)
|+|+++.+|+||||+||+|++|.|++++..|+++|+.+||||||++..+. +.+++++++++||+.|+.
T Consensus 330 glpl~~~~Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~ 409 (612)
T PLN02620 330 GLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQE 409 (612)
T ss_pred CCccccccccccceEEEeccCCCCCcccceeeecCCcEEEEEeeccCcccccccccccccccccccCccccHHHccCCCe
Confidence 99999999999999999999999999889999999999999999875210 134577899999999999
Q ss_pred EEEEEccCCCeecceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee
Q 009765 337 YEVVVTTYRGFYRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT 413 (526)
Q Consensus 337 yelVvTt~~GL~RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~ 413 (526)
|||||||.+||||||+||||+|+||||++|+|+|++|.+. |.|||++|.+++.||.+|...|.. .|+.|+||++.+
T Consensus 410 YelvvTt~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~-~~~~l~dyts~~ 488 (612)
T PLN02620 410 YELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVP-FDASLTEYTSYA 488 (612)
T ss_pred EEEEEEecCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcc-cCceeeeEEecc
Confidence 9999999999999999999999999999999999999998 999999999999999999987732 489999999999
Q ss_pred cCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHhhhhcC-CCCCcEEEEeCCCcHHHHHHHHHHcCCC
Q 009765 414 NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQRDRG-EISPLSVSIVKPGTFDRLLQVAIEKGAP 492 (526)
Q Consensus 414 ~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~~-~l~p~~v~~v~~g~f~~~~~~~~~~G~~ 492 (526)
+.++.||||++|||+..... .+.+...+++||..||++||.+|+.+|..+ .|+|++|++|++|||..++++++++|++
T Consensus 489 d~~~~PghYvl~~El~~~~~-~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~~G~s 567 (612)
T PLN02620 489 DTSTIPGHYVLFWELCLNGS-TPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGAS 567 (612)
T ss_pred ccCCCCCceEEEEEEecCCC-CCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHHcCCc
Confidence 98788999999999841100 124567889999999999999999999987 5999999999999999999999999999
Q ss_pred CCCCCCCcccCCHhHHHHHhccceEEEecc
Q 009765 493 ASQYKPPKIVRNREIVEFMEGCSLVTVRLD 522 (526)
Q Consensus 493 ~~Q~K~Pr~~~~~~~~~~l~~~~~~~~~~~ 522 (526)
.+|||+|||+++++++++|+++|++..--.
T Consensus 568 ~~QyK~Pr~v~~~~~~~~l~~~v~~~~~s~ 597 (612)
T PLN02620 568 INQYKTPRCVKFAPIIELLNSRVVSNYFSP 597 (612)
T ss_pred cccccCceEecCHHHHHHHHhhhheeeccc
Confidence 999999999999999999999999976533
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=3.4e-111 Score=912.91 Aligned_cols=508 Identities=32% Similarity=0.632 Sum_probs=461.9
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCchhhhhhcCCCCCCChhhHhhcCCCcchhhhhHHHHHHhCCCCCCCC
Q 009765 4 DEDILKKLEDSTKNATRHQLETLQSILERQSGVRYLQPYLSGCCAPIDAATYKRTVPLSCYDDYADHINQLAGGDHGQND 83 (526)
Q Consensus 4 ~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~t~ygr~~f~~i~~~~s~~df~~~vPl~~y~d~~~~ier~~~Ge~~~~~ 83 (526)
+++.++.+|.+++|+.++|+++|++||++|++|+|||+|+.+| +++++||++|||++|+|++|||+||++|+.
T Consensus 10 ~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~~~~i---~~~e~Fk~~VPv~~Yedl~pyI~Ri~~Ge~---- 82 (606)
T PLN02247 10 NEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLDGE---SDKQSFKNKVPVVNYEDIKPCIERIANGES---- 82 (606)
T ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhcCccC---CCHHHHHHhCCCccHHHhHHHHHHHHcCCC----
Confidence 4778999999999999999999999999999999999985589 999999999999999999999999999998
Q ss_pred CCCccCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeccCCccccCCcee
Q 009765 84 QPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVNKILFFIYSDNKTTTKAGFKV 163 (526)
Q Consensus 84 ~~~l~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~gip~ 163 (526)
+.+++++||.+|..|||||+|++|+||+|+++++.... ++.+|...++++ .|++..||.||+++..+...|++|||+
T Consensus 83 ~~llt~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~--~~~l~~~~~~~~-~p~l~~Gk~~~~~~~~~~~~T~~Gip~ 159 (606)
T PLN02247 83 SSIISAQPITELLTSSGTSGGQPKLMPSTAEELDRKTF--FYNLLVPVMNKY-VDGLDQGKGMYLLFIKPEISTPSGLMA 159 (606)
T ss_pred CceeCCCCcceeeccCCCCCCceeEeeccHHHHHHHHH--HHHHHHHHHHhc-CCCcccCcEEEEEecCcCccCCCCccc
Confidence 33466999999999999997799999999999987544 667777777764 388889999999988888999999999
Q ss_pred eeccchhHH------------------------------------------------------HHHHHHhhhHHHHHHHH
Q 009765 164 MAASAFPLQ------------------------------------------------------GLIGAFSFFESKWEQLC 189 (526)
Q Consensus 164 g~~s~~~~~------------------------------------------------------~ll~~~~~l~~~w~~l~ 189 (526)
|++++.+++ +++++++.|+++|++||
T Consensus 160 g~~~t~y~~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L~ 239 (606)
T PLN02247 160 RPVLTSYYKSSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELC 239 (606)
T ss_pred ccccchhhccccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHHH
Confidence 999887663 67888999999999999
Q ss_pred HHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCCCceEEEEecCchhhhHHHHHHHhCC
Q 009765 190 DDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYAGE 269 (526)
Q Consensus 190 ~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g~ 269 (526)
+||++|+++.++++|.+|.++..++..|+|++|+.|+++|.+.+|.|++++||||+++|+||++|+|++|+++|+.|+||
T Consensus 240 ~DI~~G~ls~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~~~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gg 319 (606)
T PLN02247 240 SNIRTGCVSDWITDPSCRNAVSSILSKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGG 319 (606)
T ss_pred HHHhcCCcccccCCHHHHHHHhhcccCCCHHHHHHHHHHhcccCccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCC
Confidence 99999999999999999999999998899999999999999889999999999999999999999999999999999999
Q ss_pred CCeeccccccCCceeeeecCCCCCCCCcceecCCCceEEEeeeCCCCCcc-----------------ccCCceecccccc
Q 009765 270 VPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNE-----------------AVGEETVDFSGVE 332 (526)
Q Consensus 270 v~v~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~-----------------~~~~~~l~l~ele 332 (526)
+|+++.+|+||||+||||++|.|++++..|+++|+.+||||||.++.+.+ .+++.+++++||+
T Consensus 320 lpl~s~~Y~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk 399 (606)
T PLN02247 320 LPLVSTMYASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVK 399 (606)
T ss_pred CceecccccccceEEEeccCcCCCccCCceeecCCcEEEEEeecCCCcccccccccccccccccccccccCceecHHHcc
Confidence 99999999999999999999999888899999999999999997753100 2345699999999
Q ss_pred CCceEEEEEccCCCeecceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEE
Q 009765 333 IGKMYEVVVTTYRGFYRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEF 409 (526)
Q Consensus 333 ~G~~yelVvTt~~GL~RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f 409 (526)
.|+.|||||||.+||||||+||||+|+||||++|+|+|+||.+. |.|||++|.+++.||.++...+.. .++.+.||
T Consensus 400 ~G~~YelVvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~-~~~~l~d~ 478 (606)
T PLN02247 400 VGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEP-LGFLLTEY 478 (606)
T ss_pred CCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcc-cCeeeeee
Confidence 99999999999999999999999999999999999999999998 999999999999999999876632 48899999
Q ss_pred EEeecCCCCCceEEEEEEeecCcc--ccCCCHHHHHHHHHHHHHHhChhHHhhhhcC-CCCCcEEEEeCCCcHHHHHHHH
Q 009765 410 AGYTNLESSPKKLMIFVEIREGCT--KLRDSVAILRRCCSSLEDAFGSIYKVQRDRG-EISPLSVSIVKPGTFDRLLQVA 486 (526)
Q Consensus 410 ~~~~~~~~~~~~y~l~vE~~~~~~--~~~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~~-~l~p~~v~~v~~g~f~~~~~~~ 486 (526)
++.++.++.||||++|||+..... ....+...+++||..||++||.+|+.+|..+ +|+|++|++|++|||.++++++
T Consensus 479 ts~~d~~~~PghYvlf~El~~~~~~~~~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~~igPLeirvv~~GtF~~l~~~~ 558 (606)
T PLN02247 479 TSYADTSSIPGHYVLFWELKTRGSNDPPELDPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFC 558 (606)
T ss_pred ecccccCCCCCceEEEEEeecCCCCccccchHHHHHHHHHHHHHHhhHHHHHHhhccCcCCCcEEEEeCCChHHHHHHHH
Confidence 999997778999999999952110 0123467789999999999999999999995 9999999999999999999999
Q ss_pred HHcCCCCCCCCCCcccCCHhHHHHHhccceEEEecc
Q 009765 487 IEKGAPASQYKPPKIVRNREIVEFMEGCSLVTVRLD 522 (526)
Q Consensus 487 ~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~~~~~~~~~ 522 (526)
+++|++.+|||+|||+++.+++++|+++|++..--.
T Consensus 559 ~~~G~s~~Q~K~Pr~v~~~~~~~~l~~~v~~~~~s~ 594 (606)
T PLN02247 559 VSQGSSVNQYKTPRCIKSEEALKILDSRVIGRFFSK 594 (606)
T ss_pred HHcCCCcccccCceEecCHHHHHHHHhhhheeeccc
Confidence 999999999999999999999999999999975433
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=4.7e-106 Score=880.15 Aligned_cols=508 Identities=31% Similarity=0.618 Sum_probs=452.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCchhhhh-hcCCCCCCChhhHhhcCCCcchhhhhHHHHHHhCCCCCCCC
Q 009765 5 EDILKKLEDSTKNATRHQLETLQSILERQSGVRYLQPY-LSGCCAPIDAATYKRTVPLSCYDDYADHINQLAGGDHGQND 83 (526)
Q Consensus 5 ~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~t~ygr~~-f~~i~~~~s~~df~~~vPl~~y~d~~~~ier~~~Ge~~~~~ 83 (526)
++.++.+|..++|++++|+++|++||++|++|+|||+| |++| +++++||++|||++|+|++|||+|+++||.
T Consensus 21 ~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~gf~~i---~~~~~F~~~VPv~~Yedl~pyIeRi~~Ge~---- 93 (597)
T PLN02249 21 VKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGA---VDRKTFKSKVPVVTYEDLKTEIQRISNGDR---- 93 (597)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCC---CCHHHHHHhCCCccHHHhHHHHHHHHcCCC----
Confidence 67789999999999999999999999999999999999 9999 999999999999999999999999999988
Q ss_pred CCCccCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeccCCccccCCcee
Q 009765 84 QPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVNKILFFIYSDNKTTTKAGFKV 163 (526)
Q Consensus 84 ~~~l~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~gip~ 163 (526)
+++||++||.+|..|||||+|++|+||+|+++++......+..++ ..+.+ .+++..||.|++++......|.+|+|+
T Consensus 94 ~~vL~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~--~~~~~-~~~l~~Gk~l~~~~~~~~~~t~gG~p~ 170 (597)
T PLN02249 94 SPILSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMP--VMNLY-VPGLDKGKGLYFLFVKSESKTSGGLPA 170 (597)
T ss_pred CceeCCCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHH--HHhcc-CCccccCcEEEEEeccccccCCCCCcc
Confidence 459999999999999999999999999999999843332344443 33332 378888999998888888889999998
Q ss_pred eeccchhHH----------------------------------------------------HHHHHHhhhHHHHHHHHHH
Q 009765 164 MAASAFPLQ----------------------------------------------------GLIGAFSFFESKWEQLCDD 191 (526)
Q Consensus 164 g~~s~~~~~----------------------------------------------------~ll~~~~~l~~~w~~l~~d 191 (526)
|+.++.+++ .++.++..++++|+++|+|
T Consensus 171 ~~~~~~~~~~~~f~~~~~~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~~~~l~~~weel~~d 250 (597)
T PLN02249 171 RPALTSYYKSDHFRTSDYDNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQD 250 (597)
T ss_pred CccccccccccccccccccccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHHHHHHHHHHHHHHHH
Confidence 885543111 4666677789999999999
Q ss_pred HHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCCCceEEEEecCchhhhHHHHHHHhCCCC
Q 009765 192 LENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYAGEVP 271 (526)
Q Consensus 192 I~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g~v~ 271 (526)
|++|+++.++++|.+|..+..++|.|+|++|++++++|.+.+|+|++++|||||++|+||++|+|++|++.+++|+|+++
T Consensus 251 I~~g~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~~~~~gii~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~~~ 330 (597)
T PLN02249 251 ISTGTLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLP 330 (597)
T ss_pred HHhCCCcccccchHHHHHHHhhcCCCCHHHHHHHHHHhccccccccHHHhCCCCCeEEEEecCChHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999887899999999999999999999999999999999999999
Q ss_pred eeccccccCCceeeeecCCCCCCCCcceecCCCceEEEeeeCCCCCc-cccCCceeccccccCCceEEEEEccCCCeecc
Q 009765 272 VLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKN-EAVGEETVDFSGVEIGKMYEVVVTTYRGFYRY 350 (526)
Q Consensus 272 v~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~-~~~~~~~l~l~ele~G~~yelVvTt~~GL~RY 350 (526)
+++.+|+||||+||+|+++.|++++..|+++++++||||||.++... ..+++.+++++|||.|+.|||||||.+|||||
T Consensus 331 ~~~~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~GLyRY 410 (597)
T PLN02249 331 MASTIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGALDETSLVELADVEVGKEYELVITTYAGLYRY 410 (597)
T ss_pred cccccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecccCCcccCCCCcEecHHHcCCCCeEEEEEEcccceeEe
Confidence 99999999999999999998888778999999999999999875311 12567899999999999999999999999999
Q ss_pred eeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEE
Q 009765 351 RLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVE 427 (526)
Q Consensus 351 r~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE 427 (526)
++||+|+|+||||++|+|+|+||.++ +.|||++|++++.||.++...++. .|+.|.||++..+..+.|+||++|||
T Consensus 411 ~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~-~~~~v~eft~~~~~~~~p~Hyvl~we 489 (597)
T PLN02249 411 RVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAE-QGTRVIEYTSYAETKTIPGHYVIYWE 489 (597)
T ss_pred ecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhh-cCceEEEeEEecCCCCCCCceEEEEE
Confidence 99999999999999999999999998 999999999999999997654432 68999999998887666999999999
Q ss_pred eecCcccc-CCCHHHHHHHHHHHHHHhChhHHhhhhcC-CCCCcEEEEeCCCcHHHHHHHHHHcCCCCCCCCCCcccCCH
Q 009765 428 IREGCTKL-RDSVAILRRCCSSLEDAFGSIYKVQRDRG-EISPLSVSIVKPGTFDRLLQVAIEKGAPASQYKPPKIVRNR 505 (526)
Q Consensus 428 ~~~~~~~~-~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~~-~l~p~~v~~v~~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~ 505 (526)
+....+.. ..+.+.+++||..++++||.+|+.+|..+ +|+|++|++|++|+|..|+++++++|++.||+|+|||++++
T Consensus 490 i~~~~~~~~~~~~~~~~~~~~~~e~~ln~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G~~~gQ~K~Prl~~~~ 569 (597)
T PLN02249 490 LLGRDQSNALPSDEVMAKCCLEMEESLNSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRCVSLT 569 (597)
T ss_pred EeccccccCCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhCCCcCCCcCCceEeCCH
Confidence 84210000 14567888999999999999999999886 89999999999999999999999999999999999999999
Q ss_pred hHHHHHhccceEEEeccC
Q 009765 506 EIVEFMEGCSLVTVRLDS 523 (526)
Q Consensus 506 ~~~~~l~~~~~~~~~~~~ 523 (526)
+++++|+++|++......
T Consensus 570 ~~~~~l~~~~~~~~~~~~ 587 (597)
T PLN02249 570 PIMELLDSRVVSAHFSPS 587 (597)
T ss_pred HHHHHHHhhhheeecccc
Confidence 999999999999766443
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=2.3e-101 Score=841.38 Aligned_cols=461 Identities=33% Similarity=0.594 Sum_probs=360.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhccCCchhhhh-hcCCCCCCChhh--HhhcCCCcchhhhhHHHHHHhCCCCCCCC
Q 009765 7 ILKKLEDSTKNATRHQLETLQSILERQSGVRYLQPY-LSGCCAPIDAAT--YKRTVPLSCYDDYADHINQLAGGDHGQND 83 (526)
Q Consensus 7 ~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~t~ygr~~-f~~i~~~~s~~d--f~~~vPl~~y~d~~~~ier~~~Ge~~~~~ 83 (526)
.+++|+++++|++++|+++|++||+.|++|+|||+| |++| +|++| ||++|||++|+|++|||+||++||.
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~gf~~i---~s~ed~~Fr~~VPi~~Yed~~pyIeR~~~Ge~---- 74 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDHGFAGI---RSVEDESFRKRVPITDYEDYRPYIERIAEGEE---- 74 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCTT--S-------HHHHHHHHS--BEHHHHHHHHHHHHTT------
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhcCCCCC---CCcchHHHHHhCCCccHHHHHHHHHHHhcCCC----
Confidence 479999999999999999999999999999999999 9999 99999 9999999999999999999999999
Q ss_pred CCCccCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCceEEEE--eccCCccccCC
Q 009765 84 QPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKH-DVNKILFFI--YSDNKTTTKAG 160 (526)
Q Consensus 84 ~~~l~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~l~~~--~~~~~~~~~~g 160 (526)
++||++|+.+|..|||||++++|+||+|+++++.++...+...|..++.++ .|.. ..|+.+++. +.++...+++|
T Consensus 75 -~vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~-~p~~~~~gk~~~l~~~~~~~~~~t~~G 152 (528)
T PF03321_consen 75 -NVLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRN-FPGLLFQGKSLYLSFSFAPPPLRTPGG 152 (528)
T ss_dssp -CCTSSS--SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHH-SSS--TTSE--EEEE------EE-TTS
T ss_pred -CCCCCCCCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceEEEeecCCCcccCCCC
Confidence 799999999999999999444999999999999877545666666555555 2555 368855533 33567888999
Q ss_pred ceeeeccchhHH-------------------------------------------------HHHHHHhhhHHHHHHHHHH
Q 009765 161 FKVMAASAFPLQ-------------------------------------------------GLIGAFSFFESKWEQLCDD 191 (526)
Q Consensus 161 ip~g~~s~~~~~-------------------------------------------------~ll~~~~~l~~~w~~l~~d 191 (526)
+|+|++|+++++ .++.+++.++++|+++++|
T Consensus 153 i~~g~~s~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~d 232 (528)
T PF03321_consen 153 IPIGSISGIPYRMIPPWFRSWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVED 232 (528)
T ss_dssp -EEE-HHHHHHT--SCCHHG-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecccccchhhChHHHccCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHH
Confidence 999999997655 5667788899999999999
Q ss_pred HHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCCCceEEEEecCchhhhHHHHHHHhCCCC
Q 009765 192 LENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMSQYCSKIKYYAGEVP 271 (526)
Q Consensus 192 I~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~~~y~~~l~~~~g~v~ 271 (526)
|++|+++ .+.|+|+||++|+++|++ + .+++++|||+|++|+||++|+|++|+++|++++|+++
T Consensus 233 I~~G~~~---------------~~~p~p~rA~~L~~~~~~-~-~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~ 295 (528)
T PF03321_consen 233 IRDGTLS---------------LLRPNPERAAELRAEFEK-G-RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFGGVP 295 (528)
T ss_dssp HHHTS-----------------C-S--HHHHHHHHHHHCC-S-TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHTTS-
T ss_pred hcCCccc---------------cCCCCHHHHHHHHHhhcc-c-CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCc
Confidence 9999966 237999999999999998 5 7899999999999999999999999999999999999
Q ss_pred eeccccccCCceeeeecCCCCCCCCcceecCCCceEEEeeeCCCCC-ccccCCceeccccccCCceEEEEEccCCCeecc
Q 009765 272 VLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEK-NEAVGEETVDFSGVEIGKMYEVVVTTYRGFYRY 350 (526)
Q Consensus 272 v~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~-~~~~~~~~l~l~ele~G~~yelVvTt~~GL~RY 350 (526)
+++.+|+||||+||+|++++. ..|+++++++||||||+++.+ +..+++++++++|||.|++|||||||.+|||||
T Consensus 296 ~~~~~y~ASEg~i~i~~~~~~----~~~~l~~~~~ffEFip~~~~~~~~~~~~~~l~~~ele~G~~YelviTt~~GLyRY 371 (528)
T PF03321_consen 296 IQSKGYGASEGFIGIPLDPED----PGYVLAPDSGFFEFIPVDEDEQNPSEQPKTLLLHELEVGEEYELVITTNSGLYRY 371 (528)
T ss_dssp EEE-EEEETTEEEEEES-CCC------EEE-TTSSEEEEEE-STT-------SSSEEGGG--TT-EEEEEEESTTS-SSE
T ss_pred eeeccccccceEEEEecCCCC----CceEeecCCeEEEEEeccCCcccccCCCceecHHHhcCCCeEEEEEecccceeee
Confidence 999999999999999998443 568899999999999998641 015679999999999999999999999999999
Q ss_pred eeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEeec-CCCCCceEEEEE
Q 009765 351 RLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTN-LESSPKKLMIFV 426 (526)
Q Consensus 351 r~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~-~~~~~~~y~l~v 426 (526)
|+||||+|+||+|++|+|+|+||.++ |.|||++|.+|+.||.++++ . +|+.+.+|++.++ .++.+|||++||
T Consensus 372 ~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~--~--~~~~~~~f~~~~~~~~~~~~~Y~~~~ 447 (528)
T PF03321_consen 372 RIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ--E--TGLELRDFTVAPDPSSGNPPHYVLFW 447 (528)
T ss_dssp EECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH--C--TT-EEEEEEEEEE--SSSSBEEEEEE
T ss_pred ecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH--h--cCCceeeEEEEeecccCCCCceEEEE
Confidence 99999999999999999999999997 99999999999999999985 4 7999999999998 567799999999
Q ss_pred EeecCccccCCCHHHHHHHHHHHHHHh---ChhHHhhhhc-CCCCCcEEEEeCCCcHHHHHHHHHHc-CCCCCCCCCCcc
Q 009765 427 EIREGCTKLRDSVAILRRCCSSLEDAF---GSIYKVQRDR-GEISPLSVSIVKPGTFDRLLQVAIEK-GAPASQYKPPKI 501 (526)
Q Consensus 427 E~~~~~~~~~~~~~~~~~~~~~ld~~L---n~~Y~~~R~~-~~l~p~~v~~v~~g~f~~~~~~~~~~-G~~~~Q~K~Pr~ 501 (526)
|+... +..++.|++.||++| |++|+.+|+. |+|+|++|++|++|+|.+|+++++++ |++.+|+|+|||
T Consensus 448 e~~~~-------~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~Q~K~pr~ 520 (528)
T PF03321_consen 448 ELEGE-------PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGGSAGQYKVPRL 520 (528)
T ss_dssp EECS--------HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T--SSS----SS
T ss_pred EeCCC-------chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCCCccceeCccc
Confidence 99642 457889999999999 9999999999 99999999999999999999999999 999999999999
Q ss_pred cCCHhHH
Q 009765 502 VRNREIV 508 (526)
Q Consensus 502 ~~~~~~~ 508 (526)
++++++.
T Consensus 521 ~~~~~~~ 527 (528)
T PF03321_consen 521 IRDREFV 527 (528)
T ss_dssp --TCHHH
T ss_pred cCccccC
Confidence 9999874
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=100.00 E-value=4.8e-34 Score=298.55 Aligned_cols=396 Identities=17% Similarity=0.165 Sum_probs=272.2
Q ss_pred HHHHH-HHhHHHHHHHHHHHHHHhc-cCCchhhhhhcCCC-CC---CChhhHhhcCCCcchhhhhHHHH-HHhCCCCCCC
Q 009765 10 KLEDS-TKNATRHQLETLQSILERQ-SGVRYLQPYLSGCC-AP---IDAATYKRTVPLSCYDDYADHIN-QLAGGDHGQN 82 (526)
Q Consensus 10 ~~e~~-~~~~~~~Q~~~L~~iL~~~-~~t~ygr~~f~~i~-~~---~s~~df~~~vPl~~y~d~~~~ie-r~~~Ge~~~~ 82 (526)
+.|.+ .+.+++.|++.|+.++++. +|++|||++|++.+ .| ++.+|+. ++|+++++++|.... ++.+.
T Consensus 14 ~~e~~~r~eL~~lq~~rl~~~~k~~yeNsPfYr~~f~~~~v~p~~i~~l~Dl~-klP~t~K~~lre~ypf~~~~~----- 87 (438)
T COG1541 14 EIETLSRKELEKLQEKRLKSTVKYVYENSPFYRKKFKEAGVDPDDIKTLEDLA-KLPFTTKDDLRENYPFGDFAV----- 87 (438)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCChHHhhCHHHHH-hCCCCcHHHHHHhCCcccccc-----
Confidence 56776 6899999999999999995 99999999977555 34 7999995 899999999988664 33332
Q ss_pred CCCCccCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCceEEEEeccC--Ccccc
Q 009765 83 DQPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHD--VNKILFFIYSDN--KTTTK 158 (526)
Q Consensus 83 ~~~~l~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~l~~~~~~~--~~~~~ 158 (526)
....+++++.||||| |+|+.+|+|..+...|....++.++.++.... +.+. .+.+|| .++.. .+...
T Consensus 88 -----~~~~i~~ihaSSGTT-GkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~g--d~v~~~~~yGl~-tgg~~~~~ga~r 158 (438)
T COG1541 88 -----PKEEIVRIHASSGTT-GKPTVFGYTAKDIERWAELLARSLYSAGVRKG--DKVQNAYGYGLF-TGGLGLHYGAER 158 (438)
T ss_pred -----cccceEEEEccCCCC-CCceeeecCHHHHHHHHHHHHHHHHHccCCCC--CEEEEEeeeccc-cCCchhHHHHHh
Confidence 235677899999999 99999999999998888877777766655443 2221 233333 22211 11112
Q ss_pred CCceeeeccchhHHHHHHHHhhhHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcc
Q 009765 159 AGFKVMAASAFPLQGLIGAFSFFESKWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIF 238 (526)
Q Consensus 159 ~gip~g~~s~~~~~~ll~~~~~l~~~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~ 238 (526)
-|..+=++++......++++..+ . |.+ +.++|+ .+..|++.+++.|. ..
T Consensus 159 ig~~vip~~~g~~~~~~~l~~df--------------~-------~tv------I~~tps--~~l~lae~~~~~G~--~~ 207 (438)
T COG1541 159 IGATVIPISGGNTERQLELMKDF--------------K-------PTV------IAATPS--YLLYLAEEAEEEGI--DP 207 (438)
T ss_pred hCEEEEccCCccHHHHHHHHHhc--------------C-------CcE------EEEChH--HHHHHHHHHHHcCC--Ch
Confidence 22222122222224444444333 4 222 666776 77788888888641 22
Q ss_pred cccCCCCceEEEEecCc--hhhhHHHHHHHhCCCCeeccccccCCcee-eeecCCCCCCCCcceecCCCceEEEeeeCCC
Q 009765 239 SKLWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQPPQTTRFVMLPTAAYFEFLPFDM 315 (526)
Q Consensus 239 ~~lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~ 315 (526)
.++ ++| ..++++- .++.++.|++.|| ++++ +.||+||++. | ..+|.... .++++.+..++|.+++++
T Consensus 208 ~~~--~lk--~~i~gaE~~see~R~~ie~~~g-~~~~-diYGltE~~g~g---~~eC~~~~-glhi~eD~~~~Ei~dP~t 277 (438)
T COG1541 208 DKL--SLK--KGIFGAEPWSEEMRKVIENRFG-CKAF-DIYGLTEGFGPG---AGECTERN-GLHIWEDHFIFEIVDPET 277 (438)
T ss_pred hhc--cee--EEEEecccCCHHHHHHHHHHhC-Ccee-eccccccccCCc---cccccccc-CCCcchhhceeeeecCCc
Confidence 344 566 4444442 4789999999995 9999 9999999944 4 24676655 455677778999999887
Q ss_pred CCccccCCceeccccccCCceEEEEEccCC----CeecceeCCEEEEeeecCCC----CEE-EEeeeCCC---cceeecC
Q 009765 316 EKNEAVGEETVDFSGVEIGKMYEVVVTTYR----GFYRYRLGDIVKVVDFYNSS----PQV-EFVMRAPK---SSFEIIS 383 (526)
Q Consensus 316 ~~~~~~~~~~l~l~ele~G~~yelVvTt~~----GL~RYr~GDvV~v~g~~~~~----P~i-~f~gR~~~---i~gEk~~ 383 (526)
. ..|..|+.||||+||+. .|+||||||++.+....|.| |+| +..||.++ ++|.+++
T Consensus 278 ~------------e~l~dge~GelV~T~L~~~~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vf 345 (438)
T COG1541 278 G------------EQLPDGERGELVITTLTKEGMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVF 345 (438)
T ss_pred C------------ccCCCCCeeEEEEEeccccCcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeC
Confidence 3 34669999999999973 39999999999999876544 344 88999999 8999999
Q ss_pred HHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHhhhhc
Q 009765 384 ERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQRDR 463 (526)
Q Consensus 384 e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~ 463 (526)
+.+|+.++.+... +.. +|.+.+...+......+-||..++. .+....++++..+...+ ..
T Consensus 346 p~~ie~~l~~~~~-------~~~-~yqi~~~~~~~~d~L~V~vE~~~~~----~~~~~~~~~~~~l~~~~--------~~ 405 (438)
T COG1541 346 PSQIERVLLQIPE-------VTP-HYQIILTRNGGLDELTVRVELENEA----EELEDERRLAKKLIKNI--------KS 405 (438)
T ss_pred HHHHHHHHhcccC-------CCc-eEEEEEecCCCCceEEEEEEecCcc----cchHHHHHHHHHHHHHH--------Hh
Confidence 9999999987532 222 8988876655466778889986420 11122222333443333 23
Q ss_pred CCCCCcEEEEeCCCcHHHHHHHHHHcCCCCCCCCCCcccCCH
Q 009765 464 GEISPLSVSIVKPGTFDRLLQVAIEKGAPASQYKPPKIVRNR 505 (526)
Q Consensus 464 ~~l~p~~v~~v~~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~ 505 (526)
-....+.|.+|.+|+.++.. + |.+|++..+
T Consensus 406 ~~~~~~~v~~v~~g~l~r~~----------~--K~krvvd~r 435 (438)
T COG1541 406 ELGVRVEVELVEPGELPRTE----------G--KAKRVVDKR 435 (438)
T ss_pred hcCCceEEEEEeccceeccc----------C--ceeEEEEec
Confidence 34588999999999988432 1 777777554
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=2.7e-30 Score=278.04 Aligned_cols=395 Identities=13% Similarity=0.057 Sum_probs=232.7
Q ss_pred HHHH-HHhHHHHHHHHHHHHHHhc-cCCchhhhhhcCCC-CC---CChhhHhhcCCCcchhhhhHHHHHHhCCCCCCCCC
Q 009765 11 LEDS-TKNATRHQLETLQSILERQ-SGVRYLQPYLSGCC-AP---IDAATYKRTVPLSCYDDYADHINQLAGGDHGQNDQ 84 (526)
Q Consensus 11 ~e~~-~~~~~~~Q~~~L~~iL~~~-~~t~ygr~~f~~i~-~~---~s~~df~~~vPl~~y~d~~~~ier~~~Ge~~~~~~ 84 (526)
+|++ ..++++.|.+.|+++|+++ ++++|||++|++.| .| ++++||+ ++|+++++|++...... .+ .|+
T Consensus 6 ~e~~~~~~l~~~q~~rl~~~l~~a~~~spfYr~~~~~~g~~p~~i~sl~dl~-~lP~~~k~~lr~~~p~~--~~---~~~ 79 (445)
T TIGR03335 6 IETMERGELDALVEERIRYTVHYAAEHSPFYKKWFQENNISPSDIKSHEDLL-ELPVISGEVIRKNQPPV--TD---DFM 79 (445)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCcc--cc---ccc
Confidence 4555 6789999999999999996 79999998865444 23 8899996 79999999998754100 00 012
Q ss_pred CC-ccCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEeccCCccccCCce
Q 009765 85 PL-LAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDV-NKILFFIYSDNKTTTKAGFK 162 (526)
Q Consensus 85 ~~-l~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~gip 162 (526)
.. ...+.+.++..||||| |+||.+++|.+.+..+....++.++. .++.. .+.+. .++ .....++.
T Consensus 80 ~~~~~~~~i~~i~~TSGTT-G~Pk~v~~T~~dl~~~~~~~~r~~~~--------~G~~~gD~vl~-~~~--~~~~~g~~- 146 (445)
T TIGR03335 80 FKSADWKDIYTIHETSGTS-GTPKSFFLTWDDWKRYAEKYARSFVS--------QGFTAGDRMVI-CAS--YGMNVGAN- 146 (445)
T ss_pred cccCCHHHeEEEEeCCCCC-CCcceeeecHHHHHHHHHHHHHHHHH--------cCCCCCCeEEE-Eec--CCcchhHH-
Confidence 11 1345677888999999 99999999998876543322211111 22322 23333 221 11110100
Q ss_pred eeeccchhHHHH-HHHHhhhHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCccccc
Q 009765 163 VMAASAFPLQGL-IGAFSFFESKWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKL 241 (526)
Q Consensus 163 ~g~~s~~~~~~l-l~~~~~l~~~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~l 241 (526)
...+... +.+.-+.....+..++.|++.. ++. +.|+|+ .+..|.+.+++.| +-..
T Consensus 147 -----~~~~~~~~~Ga~vi~~~~~~~~~~~i~~~~----~t~---------l~~~ps--~ll~La~~~~~~g---~~~~- 202 (445)
T TIGR03335 147 -----TMTLAAREVGMSIIPEGKCTFPIRIIESYR----PTG---------IVASVF--KLLRLARRMKAEG---IDPA- 202 (445)
T ss_pred -----HHHHHHHHcCCEEEcCCchhHHHHHHHHhC----CCE---------EEECHH--HHHHHHHHHHHcC---CCcc-
Confidence 0000000 0000000001112233344433 111 444554 5555666665543 2222
Q ss_pred CCCCceEEEEecCc-h-hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCCCCcceecCCCceEEEeeeCCCCCcc
Q 009765 242 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNE 319 (526)
Q Consensus 242 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~ 319 (526)
.++++ ..+.+|. . ...++.+++.|| ++++ +.||+||+.++. +|... ..+++..+..++|++++++
T Consensus 203 ~~~lr--~ii~gGE~l~~~~r~~ie~~~g-~~v~-~~YG~TE~~~~~----~c~~~-~g~h~~~d~~~vEIvDp~~---- 269 (445)
T TIGR03335 203 ESSIR--RLVVGGESFADESRNYVEELWG-CEVY-NTYGSTEGTMCG----ECQAV-AGLHVPEDLVHLDVYDPRH---- 269 (445)
T ss_pred cCcce--EEEEcCCCCCHHHHHHHHHHhC-CcEE-ecCChhhhhheE----EecCC-CCccccCCceEEEEEcCCC----
Confidence 24677 2333442 2 355678888885 9999 899999985432 34332 3466777778999999764
Q ss_pred ccCCceeccccccCCceEEEEEccC--------CCeecceeCCEEEEe-eecCCC----CEEEEeeeCCC---cceeecC
Q 009765 320 AVGEETVDFSGVEIGKMYEVVVTTY--------RGFYRYRLGDIVKVV-DFYNSS----PQVEFVMRAPK---SSFEIIS 383 (526)
Q Consensus 320 ~~~~~~l~l~ele~G~~yelVvTt~--------~GL~RYr~GDvV~v~-g~~~~~----P~i~f~gR~~~---i~gEk~~ 383 (526)
.+ .|.+|+.+|||+|++ ..|+||||||++++. ...|.| |+|..+||.++ |+|.+++
T Consensus 270 ---~~-----~vp~Ge~GELvvT~L~~~~~r~~~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~ 341 (445)
T TIGR03335 270 ---QR-----FLPDGECGRIVLTTLLKPGERCGSLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFN 341 (445)
T ss_pred ---CC-----CCcCCCceEEEEEecCCCCccCCceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeC
Confidence 22 256899999999998 239999999999974 355544 46776899998 9999999
Q ss_pred HHHHHHHHHHHH--HHhccccCceEEEEEEeecCCC-CCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHhh
Q 009765 384 ERDLMSAMESFQ--MMLRNVMAVEIVEFAGYTNLES-SPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQ 460 (526)
Q Consensus 384 e~~v~~av~~~~--~~l~~~~g~~l~~f~~~~~~~~-~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~~~ 460 (526)
+.+|+++|.+.. ..+ .+ +|.++.+... ....-.+-||..++ . ....+++.+.+.+++...++..
T Consensus 342 p~~ie~~l~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~v~~e~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~ 408 (445)
T TIGR03335 342 RVDVERAVFQRENMDSL---TG----EYEAFLYGEEEGEITLRVSLECEDK-----D-NCSIHDIQENFTGTFLKYKPEL 408 (445)
T ss_pred HHHHHHHHhccCCCCCC---Cc----cEEEEEecCCCCCceEEEEEEecCc-----c-cchHHHHHHHHHHHHhhhhhhh
Confidence 999999998741 212 23 7887765432 12345566776532 1 1223344445544421112221
Q ss_pred hhc--CCCCCcEEEEeCCCcHHHH
Q 009765 461 RDR--GEISPLSVSIVKPGTFDRL 482 (526)
Q Consensus 461 R~~--~~l~p~~v~~v~~g~f~~~ 482 (526)
+.. ...-.+.|.+|++|++++.
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~ 432 (445)
T TIGR03335 409 IGSYDEGIFQILVNFTGPGELELH 432 (445)
T ss_pred hhhhhcceEEEEEEEeCCCCcccc
Confidence 111 1134578999999999743
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.94 E-value=8.7e-26 Score=240.94 Aligned_cols=382 Identities=14% Similarity=0.117 Sum_probs=223.9
Q ss_pred HHhHHHHHHHHHHHHHHhc-cCCchhhhhhcCCC-CC---CChhhHhhcCCCcchhhhhHHHHHHhCCCCCCCCCCCc--
Q 009765 15 TKNATRHQLETLQSILERQ-SGVRYLQPYLSGCC-AP---IDAATYKRTVPLSCYDDYADHINQLAGGDHGQNDQPLL-- 87 (526)
Q Consensus 15 ~~~~~~~Q~~~L~~iL~~~-~~t~ygr~~f~~i~-~~---~s~~df~~~vPl~~y~d~~~~ier~~~Ge~~~~~~~~l-- 87 (526)
..++++.|.+.|+++|+++ ++++|||++|++.| .| .|++||+ ++|+++|++++..... .++
T Consensus 5 ~~~l~~~q~~~l~~~~~~a~~~~pfYr~~~~~~~i~~~~i~~~~dl~-~lP~~~K~~l~~~~~~-----------~~~~~ 72 (422)
T TIGR02155 5 LDELRALQTQRLKWTVKHAYENVPHYRKAFDAAGVHPDDLQSLSDLA-KFPFTQKHDLRDNYPF-----------GLFAV 72 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHhhcCCC-----------cccCC
Confidence 4678999999999999996 89999998865443 22 7899996 7999999999765421 122
Q ss_pred cCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeccCCccccCCceeeecc
Q 009765 88 AVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVNKILFFIYSDNKTTTKAGFKVMAAS 167 (526)
Q Consensus 88 ~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~gip~g~~s 167 (526)
..+.+.++..||||| |+||.+++|+..+..+.....+.+ . + .++..+..+...++ .....++++
T Consensus 73 ~~~~~~~~~~TSGTT-G~Pk~v~~t~~~~~~~~~~~~~~~-----~-~--~g~~~~d~~~~~~~--~~~~~~~~~----- 136 (422)
T TIGR02155 73 PREQVVRIHASSGTT-GKPTVVGYTQNDIDTWSSVVARSI-----R-A--AGGRPGDLIHNAYG--YGLFTGGLG----- 136 (422)
T ss_pred ChHHcEEEEECCCCC-CCCeEeccCHHHHHHHHHHHHHHH-----H-H--cCCCCCcEEEEccC--ccccchhHH-----
Confidence 234566788999999 999999999987654322111111 1 1 22222222221211 100011110
Q ss_pred chhHHHHH--HHHhhhHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCCC
Q 009765 168 AFPLQGLI--GAFSFFESKWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNV 245 (526)
Q Consensus 168 ~~~~~~ll--~~~~~l~~~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~L 245 (526)
..+....+ ..+.+-...-+.+++.|++.+ ++. +.|.|+ .+..|.+...+.| +-... +++
T Consensus 137 ~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~----~t~---------l~~~Ps--~l~~L~~~~~~~~---~~~~~-~~l 197 (422)
T TIGR02155 137 AHYGAEKLGCTVVPISGGQTEKQVQLIQDFK----PDI---------IMVTPS--YMLNLLEELKRMG---IDPAQ-TSL 197 (422)
T ss_pred HHHHHHHcCcEEEecCCCCHHHHHHHHHHHC----CCE---------EEEcHH--HHHHHHHHHHHcC---CCccc-Cce
Confidence 00000000 000000011234455555555 222 555666 5555555544433 21111 256
Q ss_pred ceEEEEecCc--hhhhHHHHHHHhCCCCeeccccccCCce---eeeecCCCCCCCCcceecCCCceEEEeeeCCCCCccc
Q 009765 246 RYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECY---VGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEA 320 (526)
Q Consensus 246 ~~i~~~~~G~--~~~y~~~l~~~~g~v~v~~~~Y~aSEg~---i~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~ 320 (526)
+ .++.+|. ....++.+++.|| ++++ +.||+||+. ++. .|...+..+++..+..+.|.+++++
T Consensus 198 r--~i~~~ge~l~~~~~~~i~~~~g-~~v~-~~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~eivd~~~----- 264 (422)
T TIGR02155 198 Q--VGIFGAEPWTNAMRKEIEARLG-MKAT-DIYGLSEVIGPGVAM----ECVETQDGLHIWEDHFYPEIIDPHT----- 264 (422)
T ss_pred E--EEEEeCCcCCHHHHHHHHHHhC-CceE-ecccchhhcCCceee----cccccCCCceEecCeeEEEEECCCC-----
Confidence 6 3344443 2466678888895 8999 899999973 332 2321123355666667889998653
Q ss_pred cCCceeccccccCCceEEEEEccCCC----eecceeCCEEEEeeecC--CCCEE-EEeeeCCC---cceeecCHHHHHHH
Q 009765 321 VGEETVDFSGVEIGKMYEVVVTTYRG----FYRYRLGDIVKVVDFYN--SSPQV-EFVMRAPK---SSFEIISERDLMSA 390 (526)
Q Consensus 321 ~~~~~l~l~ele~G~~yelVvTt~~G----L~RYr~GDvV~v~g~~~--~~P~i-~f~gR~~~---i~gEk~~e~~v~~a 390 (526)
+ .++.+|+.+|||+|+... +.||+|||++++.. .| ..|++ .+.||.++ +.|+++++.+|+.+
T Consensus 265 --g-----~~v~~Ge~Gelvvt~~~~~~~p~~ry~TGDl~~~~~-~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~ 336 (422)
T TIGR02155 265 --G-----EVLPDGEEGELVFTTLTKEALPVIRYRTRDLTRLLP-GTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEV 336 (422)
T ss_pred --C-----CCCCCCCeeEEEEecCCccccceeeEEcCcEEEEEC-CCCCcccccccccCccCCeEEECCEEECHHHHHHH
Confidence 2 235689999999998632 77999999998865 21 23444 79999998 88899999999998
Q ss_pred HHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHhhhhcCCCCCcE
Q 009765 391 MESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQRDRGEISPLS 470 (526)
Q Consensus 391 v~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~~~l~p~~ 470 (526)
+.+. .++. ..|.+..+..+.+-..+++||...+.. ........+.++++|.+.+ |..- -..+.
T Consensus 337 l~~~-------~~v~-~~~q~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~i~~~~-------~~~~-~~~~~ 399 (422)
T TIGR02155 337 ILKM-------DELS-PHYQLELTRNGHMDELTLKVELKPESY-TLRLHEQASLLAGEIQHTI-------KQEV-GVSMD 399 (422)
T ss_pred HHhC-------cCcC-CCEEEEEEcCCCccEEEEEEEEecCcc-cccchHHHHHHHHHHHHHH-------Hhcc-CcEEE
Confidence 8764 2321 156665554332336678888753210 0011222333455555555 3221 22367
Q ss_pred EEEeCCCcHHH
Q 009765 471 VSIVKPGTFDR 481 (526)
Q Consensus 471 v~~v~~g~f~~ 481 (526)
|.++.+|+|++
T Consensus 400 v~~~~~~~lp~ 410 (422)
T TIGR02155 400 VHLVEPGSLPR 410 (422)
T ss_pred EEEECCCCccC
Confidence 99999999873
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.92 E-value=2e-23 Score=222.49 Aligned_cols=318 Identities=16% Similarity=0.180 Sum_probs=210.0
Q ss_pred HHhHHHHHHHHHHHHHHhc-cCCchhhhhhcCCCCCCChhhHhhcCCCcchhhhhHHHHHHhCCC--CCC----------
Q 009765 15 TKNATRHQLETLQSILERQ-SGVRYLQPYLSGCCAPIDAATYKRTVPLSCYDDYADHINQLAGGD--HGQ---------- 81 (526)
Q Consensus 15 ~~~~~~~Q~~~L~~iL~~~-~~t~ygr~~f~~i~~~~s~~df~~~vPl~~y~d~~~~ier~~~Ge--~~~---------- 81 (526)
..++++.|++.|+++|++. .+++|||++ .++ +++ ++|+++|++++...+++...+ ..+
T Consensus 21 ~~~l~~~Q~~rL~~ll~~a~~~sPfYr~~-~~~-------~l~-~lPvl~K~~~~~~fd~~~t~~l~~~~~~~~a~~~e~ 91 (430)
T TIGR02304 21 REALENWQAKQLEKFLQFVLSHSPWFQRY-HTI-------PFN-QWPMMDKALMMEHFDELNTAGLKKDEALDCAMRSEK 91 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhc-cCC-------CHH-HCCCcCHHHHHHHHHHhhccCCChhhhhHHhhhhhh
Confidence 4678999999999999996 999999987 222 464 799999999999999987421 100
Q ss_pred --CCCCCccCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEeccCCcccc
Q 009765 82 --NDQPLLAVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDV-NKILFFIYSDNKTTTK 158 (526)
Q Consensus 82 --~~~~~l~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~ 158 (526)
.|.. .-+++ ....||||| |+|-.+.++++....+.. .. +..+...+... ++..++.++......
T Consensus 92 ~r~f~~--~~~~~-~v~~TSGSS-G~p~~f~~~~~~~~~~~a---~~-----~~~~~~~g~~~g~r~a~~~~~~~~ly~- 158 (430)
T TIGR02304 92 TRDFKP--CVGNI-SVGLSSGTS-GRRGLFVVSPEEQQMWAG---GI-----LAKVLPDGLFAKHRIAFFLRADNNLYQ- 158 (430)
T ss_pred hccccc--ccCcE-EEEECCCCC-CCceEEEECHHHHHHHHH---HH-----HhhhCccccccCCcEEEEEccChhHHH-
Confidence 0000 11344 567899999 999999999887543321 11 11221134433 455554344331110
Q ss_pred CCceeeeccchhHHHH--HHHHhhhHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCC
Q 009765 159 AGFKVMAASAFPLQGL--IGAFSFFESKWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSG 236 (526)
Q Consensus 159 ~gip~g~~s~~~~~~l--l~~~~~l~~~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g 236 (526)
. ..+.+ +..|.+. +++++.++.|.+-. |.+ +.|+|+ .+.+|++.+.+.|
T Consensus 159 ------~----~~~~~~~~~~~~l~-~~~~~~l~~L~~~~-------P~~------L~g~pS--~l~~LA~~~~~~~--- 209 (430)
T TIGR02304 159 ------S----VNNRWISLDFFDLL-APFQAHIKRLNQRK-------PSI------IVAPPS--VLRALALEVMEGE--- 209 (430)
T ss_pred ------H----HHhccceeeecCCC-cCHHHHHHHHHHhC-------CCE------EEEcHH--HHHHHHHHHHhcC---
Confidence 0 01111 3556666 77889999999888 333 777777 6677777776532
Q ss_pred cccccCCCCceEEEEecCc--hhhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCCCCcceecCCCceEEE--eee
Q 009765 237 IFSKLWPNVRYIKCVTTGS--MSQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFE--FLP 312 (526)
Q Consensus 237 ~~~~lWP~L~~i~~~~~G~--~~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~~~~~f~E--Fip 312 (526)
+ ++ .++ ..+++|. ....++.|++.|| ++++ +.||+|||++|. +|+. +.|++..+..|+| +++
T Consensus 210 l--~~--~~k--~ii~~~E~l~~~~r~~Ie~~fg-~~V~-~~YG~tEg~la~----eC~~--g~lHl~ed~~~vE~~ivD 275 (430)
T TIGR02304 210 L--TI--KPK--KVISVAEVLEPQDRELIRNVFK-NTVH-QIYQATEGFLAS----TCRC--GTLHLNEDLVHIEKQYLD 275 (430)
T ss_pred C--CC--Cce--EEEEccCCCCHHHHHHHHHHhC-CCee-EccCCchhheEE----ecCC--CCEEEccccEEEEeeEEC
Confidence 2 22 455 3344442 3466678999995 9999 899999987774 5543 5688999999999 565
Q ss_pred CCCCCccccCCceeccccccCCceEEEEEccCCC----eecceeCCEEEEeeecCCC----CEE-EEeeeCCC-cc----
Q 009765 313 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTYRG----FYRYRLGDIVKVVDFYNSS----PQV-EFVMRAPK-SS---- 378 (526)
Q Consensus 313 ~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~~G----L~RYr~GDvV~v~g~~~~~----P~i-~f~gR~~~-i~---- 378 (526)
+++ .++.|||++.. |+||+|||++++....|.| |+| ++.||.++ +.
T Consensus 276 ~~~--------------------~~~~ViT~L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~ 335 (430)
T TIGR02304 276 EHK--------------------RFVPIITDFTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITR 335 (430)
T ss_pred CCC--------------------ceEEEEecCCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecC
Confidence 331 23459999854 9999999999987776543 467 58999999 43
Q ss_pred -e--eecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEEe
Q 009765 379 -F--EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEI 428 (526)
Q Consensus 379 -g--Ek~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~ 428 (526)
| ..+++..+..++....+ + +.+|.++... ..+.++.+..
T Consensus 336 ~G~~v~v~p~~~~~~i~~~~~------~--i~~yQi~Q~~---~~~l~v~~~~ 377 (430)
T TIGR02304 336 SGDEQTVFPDFIRRVILFTLP------L--IVEYRVLQTG---SAQLELIADC 377 (430)
T ss_pred CCCeEEeCHHHHHHHHHhcCC------C--CceEEEEEcc---CCeEEEEEEe
Confidence 3 44588888776554322 3 5688877654 5677766654
No 9
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.42 E-value=1.4e-10 Score=130.38 Aligned_cols=226 Identities=15% Similarity=0.120 Sum_probs=124.0
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCC--CCeeccccccCCceeeeec-CC---CCCCCCcceecCCCceEEEeeeC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGE--VPVLGGDYFASECYVGINL-DI---AQPPQTTRFVMLPTAAYFEFLPF 313 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~--v~v~~~~Y~aSEg~i~i~~-~~---~~~~~~~~~~l~~~~~f~EFip~ 313 (526)
++|+ .+.+||. ......+++.+++ ++++ +.||+||+...+-. .+ .+.++.. ....++ .-++.++.
T Consensus 367 ~~lr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~v-G~p~~g-~~~~i~d~ 440 (637)
T PRK00174 367 SSLR---LLGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSA-TRPLPG-IQPAVVDE 440 (637)
T ss_pred ccee---EEEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcc-cCCCCC-ceEEEECC
Confidence 4666 4444443 2344566677753 8999 99999997432110 01 0111111 112233 34566664
Q ss_pred CCCCccccCCceeccccccCCceEEEEEccC-----CCee----------------cceeCCEEEEeeecCCCCEEEEee
Q 009765 314 DMEKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY----------------RYRLGDIVKVVDFYNSSPQVEFVM 372 (526)
Q Consensus 314 ~~~~~~~~~~~~l~l~ele~G~~yelVvTt~-----~GL~----------------RYr~GDvV~v~g~~~~~P~i~f~g 372 (526)
+ + .++..|+.+||+|+.. .|.| .|+|||++++. ..-.+.|+|
T Consensus 441 ~--------g-----~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d----~dG~l~~~G 503 (637)
T PRK00174 441 E--------G-----NPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRD----EDGYYWITG 503 (637)
T ss_pred C--------C-----CCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEc----CCCcEEEEE
Confidence 3 2 2356799999999862 1111 29999999986 345799999
Q ss_pred eCCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEeec-CCCCCceEEEEEEeecCccccCCCHHHHHHHHHH
Q 009765 373 RAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTN-LESSPKKLMIFVEIREGCTKLRDSVAILRRCCSS 448 (526)
Q Consensus 373 R~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~-~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ 448 (526)
|.++ +.|+++...+|+.+|.+. .+ +.+.+++.. .......-+.||.+..+ ...+....+++.+.
T Consensus 504 R~dd~ik~~G~~v~p~eIE~~l~~~-------~~--V~~~~Vvg~~~~~~g~~~~a~vv~~~~---~~~~~~~~~~l~~~ 571 (637)
T PRK00174 504 RVDDVLNVSGHRLGTAEIESALVAH-------PK--VAEAAVVGRPDDIKGQGIYAFVTLKGG---EEPSDELRKELRNW 571 (637)
T ss_pred ecccEEEeCCEEECHHHHHHHHHhC-------CC--cceEEEEeeEcCCCCeEEEEEEEECCC---CCCCHHHHHHHHHH
Confidence 9998 789999999999998753 23 345444321 11112234567776543 11122222233333
Q ss_pred HHHHhChhHHhhhhcCCCCCcEEEEeC------CCcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhcc
Q 009765 449 LEDAFGSIYKVQRDRGEISPLSVSIVK------PGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEGC 514 (526)
Q Consensus 449 ld~~Ln~~Y~~~R~~~~l~p~~v~~v~------~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~ 514 (526)
+.+.|. ....|-.+.+|+ .|-..+-.=....++.. +.+.+.-+.|++.++.+++.
T Consensus 572 l~~~l~---------~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 632 (637)
T PRK00174 572 VRKEIG---------PIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE--ILGDTSTLADPSVVEKLIEA 632 (637)
T ss_pred HHhhcC---------CccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC--CCCCcccccCHHHHHHHHHH
Confidence 333331 123566666652 33332221111223332 45667778889988887654
No 10
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.36 E-value=5.2e-10 Score=125.36 Aligned_cols=227 Identities=15% Similarity=0.130 Sum_probs=124.2
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhC--CCCeeccccccCCceee-eecCCC---CCCCCcceecCCCceEEEeeeC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAG--EVPVLGGDYFASECYVG-INLDIA---QPPQTTRFVMLPTAAYFEFLPF 313 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g--~v~v~~~~Y~aSEg~i~-i~~~~~---~~~~~~~~~l~~~~~f~EFip~ 313 (526)
++|+ ++.+||. ....+.+.+.++ +++++ +.||.||+... +...+. ..++.. ....+ +.-++.++.
T Consensus 358 ~~lr---~i~~~G~~l~~~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~~~~~-G~p~~-g~~~~i~d~ 431 (625)
T TIGR02188 358 SSLR---LLGSVGEPINPEAWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPGATPTKPGSA-TLPFF-GIEPAVVDE 431 (625)
T ss_pred ccee---EEEEecCCCCHHHHHHHHHHcCCCCCceE-ecccccccCCceeecCCCCCCcCCCcc-cCCcC-CceEEEECC
Confidence 4566 4455543 233456677775 38999 99999997322 111010 111101 11222 334566653
Q ss_pred CCCCccccCCceecccccc-CCceEEEEEccC-----CCee----------------cceeCCEEEEeeecCCCCEEEEe
Q 009765 314 DMEKNEAVGEETVDFSGVE-IGKMYEVVVTTY-----RGFY----------------RYRLGDIVKVVDFYNSSPQVEFV 371 (526)
Q Consensus 314 ~~~~~~~~~~~~l~l~ele-~G~~yelVvTt~-----~GL~----------------RYr~GDvV~v~g~~~~~P~i~f~ 371 (526)
+ + ..+. +|+.+||+|+.. .|.| -|+|||++++.. .-.+.|+
T Consensus 432 ~--------g-----~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~i~ 494 (625)
T TIGR02188 432 E--------G-----NPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDK----DGYIWIT 494 (625)
T ss_pred C--------C-----CCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcC----CCcEEEE
Confidence 2 2 2355 799999999872 1222 199999998863 3478899
Q ss_pred eeCCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHHH
Q 009765 372 MRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCS 447 (526)
Q Consensus 372 gR~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~ 447 (526)
||.++ +.|+++...+|+++|.+. .+ +.+.+|+. +........+.||.+..+ ...+....+++.+
T Consensus 495 GR~dd~i~~~G~ri~p~eIE~~l~~~-------p~--V~e~~vvg~~~~~~g~~~~a~vv~~~~---~~~~~~~~~~l~~ 562 (625)
T TIGR02188 495 GRVDDVINVSGHRLGTAEIESALVSH-------PA--VAEAAVVGIPDDIKGQAIYAFVTLKDG---YEPDDELRKELRK 562 (625)
T ss_pred ecccCEEEeCCEEECHHHHHHHHHhC-------CC--cceEEEEeeEcCCCCeEEEEEEEeCCC---CCCCHHHHHHHHH
Confidence 99998 889999999999999853 23 44555442 111112344567776543 1122222223333
Q ss_pred HHHHHhChhHHhhhhcCCCCCcEEEEeC------CCcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhcc
Q 009765 448 SLEDAFGSIYKVQRDRGEISPLSVSIVK------PGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEGC 514 (526)
Q Consensus 448 ~ld~~Ln~~Y~~~R~~~~l~p~~v~~v~------~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~ 514 (526)
.+.+.| .....|-.|.+|+ .|-..+-.=+.+..|.. .+++.+--+.|++.++.++.+
T Consensus 563 ~~~~~l---------~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~ 625 (625)
T TIGR02188 563 HVRKEI---------GPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEE-EILGDTSTLEDPSVVEELIEA 625 (625)
T ss_pred HHHhhc---------CCCccCcEEEECCCCCCCCCccchHHHHHHHHcCCC-CCCCCcccccCHHHHHHHHhC
Confidence 333333 1123555666653 33222211111223421 235667778899999888753
No 11
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.29 E-value=4.2e-10 Score=128.04 Aligned_cols=129 Identities=16% Similarity=0.131 Sum_probs=84.9
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCC--CCCCCcceecCCCceEEEeeeCCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA--QPPQTTRFVMLPTAAYFEFLPFDMEK 317 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~~ 317 (526)
++++ ++++||. ....+++.+.+++++++ +.||.||+......... .... ......++ ..++.++.+.
T Consensus 260 ~slr---~i~~gGe~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~-~iG~p~~~-~~v~i~d~~g-- 331 (705)
T PRK06060 260 RSLR---CVVSAGEALELGLAERLMEFFGGIPIL-DGIGSTEVGQTFVSNRVDEWRLG-TLGRVLPP-YEIRVVAPDG-- 331 (705)
T ss_pred ccee---EEEEecCcCCHHHHHHHHHHcCCCceE-eeeeccccCceEEeccCCCCCcC-cccccCCC-cEEEEECCCC--
Confidence 5666 4455543 34557788888889999 99999998432211110 0010 11223333 3456666432
Q ss_pred ccccCCceeccccccCCceEEEEEccC---CCee-----------cceeCCEEEEeeecCCCCEEEEeeeCCC---ccee
Q 009765 318 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-----------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFE 380 (526)
Q Consensus 318 ~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-----------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gE 380 (526)
..+..|+.+||+|+.. .|.| -|+|||+++... .-.+.|+||.++ +.|+
T Consensus 332 -----------~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~----dG~l~~~GR~dd~ik~~G~ 396 (705)
T PRK06060 332 -----------TTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS----DGWVTYRCRADDTEVIGGV 396 (705)
T ss_pred -----------CCCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC----CceEEEecccCceEEECCE
Confidence 2356899999999863 2322 299999998763 347999999998 8899
Q ss_pred ecCHHHHHHHHHHH
Q 009765 381 IISERDLMSAMESF 394 (526)
Q Consensus 381 k~~e~~v~~av~~~ 394 (526)
++...+|+.++.+.
T Consensus 397 ~v~~~eIE~~l~~~ 410 (705)
T PRK06060 397 NVDPREVERLIIED 410 (705)
T ss_pred EECHHHHHHHHHhC
Confidence 99999999888764
No 12
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.29 E-value=1.1e-10 Score=126.41 Aligned_cols=269 Identities=17% Similarity=0.145 Sum_probs=143.2
Q ss_pred cCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeccCCccccCCceeeecc
Q 009765 88 AVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVNKILFFIYSDNKTTTKAGFKVMAAS 167 (526)
Q Consensus 88 ~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~gip~g~~s 167 (526)
..+.+.+...||||| |.||.+++|...+..+.. ... .+ .++..+..+... .+..... +...
T Consensus 165 ~~~~~~~i~~TSGtT-G~PK~v~~t~~~l~~~~~----~~~-----~~--~~~~~~d~~~~~--~~~~~~~-~~~~---- 225 (521)
T PRK06187 165 DENDAAAMLYTSGTT-GHPKGVVLSHRNLFLHSL----AVC-----AW--LKLSRDDVYLVI--VPMFHVH-AWGL---- 225 (521)
T ss_pred CccceEEEEECCCCC-CCCceEEeehHHHHHHHH----HHH-----Hh--hCCCCCCEEEEe--CCchHHh-hHHH----
Confidence 445577889999999 999999999987654222 111 12 333332222211 1111100 0000
Q ss_pred chhHHHHHHHHhh-h--HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCC
Q 009765 168 AFPLQGLIGAFSF-F--ESKWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPN 244 (526)
Q Consensus 168 ~~~~~~ll~~~~~-l--~~~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~ 244 (526)
.+..+...... + ..+.+.+++.|++-. ++. +.+.|+ .+..|.+...+. ...+++
T Consensus 226 --~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~----~t~---------l~~~p~--~~~~l~~~~~~~------~~~~~~ 282 (521)
T PRK06187 226 --PYLALMAGAKQVIPRRFDPENLLDLIETER----VTF---------FFAVPT--IWQMLLKAPRAY------FVDFSS 282 (521)
T ss_pred --HHHHHHhCCEEEecCCCCHHHHHHHHHHhC----CeE---------EEchHH--HHHHHHcCcCCC------ccCcch
Confidence 00000000000 0 003344455555555 222 444444 555555444321 223467
Q ss_pred CceEEEEecCc-h-hhhHHHHHHHhCCCCeeccccccCCce-eeeecCCCCC-------CCCcceecCCCceEEEeeeCC
Q 009765 245 VRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQP-------PQTTRFVMLPTAAYFEFLPFD 314 (526)
Q Consensus 245 L~~i~~~~~G~-~-~~y~~~l~~~~g~v~v~~~~Y~aSEg~-i~i~~~~~~~-------~~~~~~~l~~~~~f~EFip~~ 314 (526)
++. ++.+|. + ...++.+.+.+ +++++ +.||+||.. ++........ .. ......+ ...++.++++
T Consensus 283 l~~--v~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~-~~~~~i~~~~ 356 (521)
T PRK06187 283 LRL--VIYGGAALPPALLREFKEKF-GIDLV-QGYGMTETSPVVSVLPPEDQLPGQWTKRR-SAGRPLP-GVEARIVDDD 356 (521)
T ss_pred hhE--EEEcCcCCCHHHHHHHHHHh-Ccchh-eeeccCccCcccccCCcccccccccccCC-ccccccC-CeEEEEECCC
Confidence 773 344443 2 45567777777 69999 899999973 2221111000 00 0111223 3456777754
Q ss_pred CCCccccCCceeccccccC--CceEEEEEccC---CC-eec------------ceeCCEEEEeeecCCCCEEEEeeeCCC
Q 009765 315 MEKNEAVGEETVDFSGVEI--GKMYEVVVTTY---RG-FYR------------YRLGDIVKVVDFYNSSPQVEFVMRAPK 376 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~--G~~yelVvTt~---~G-L~R------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~ 376 (526)
. . ++.. |+.+||+|++. .| +-+ |+|||+++... ...+.+.||.++
T Consensus 357 ~--------~-----~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~----~g~~~~~GR~~~ 419 (521)
T PRK06187 357 G--------D-----ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDE----DGYLYITDRIKD 419 (521)
T ss_pred C--------C-----CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcC----CCCEEEeecccc
Confidence 2 1 2345 99999999885 33 334 99999999863 357889999998
Q ss_pred ---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEeec-CCCCCceEEEEEEeec
Q 009765 377 ---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTN-LESSPKKLMIFVEIRE 430 (526)
Q Consensus 377 ---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~-~~~~~~~y~l~vE~~~ 430 (526)
++|.++...+|++++.+. .+ +.+.+++.. .........++++...
T Consensus 420 ~i~~~G~~v~~~~IE~~l~~~-------~~--v~~~~v~~~~~~~~~~~~~~~v~~~~ 468 (521)
T PRK06187 420 VIISGGENIYPRELEDALYGH-------PA--VAEVAVIGVPDEKWGERPVAVVVLKP 468 (521)
T ss_pred eEEcCCeEECHHHHHHHHHhC-------CC--ceEEEEEeccCCCcCceEEEEEEECC
Confidence 889999999998877643 23 445444432 1111235557777653
No 13
>PRK09274 peptide synthase; Provisional
Probab=99.28 E-value=9e-10 Score=121.24 Aligned_cols=177 Identities=15% Similarity=0.092 Sum_probs=104.1
Q ss_pred HHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCCCceEEEEecCch---hhhH
Q 009765 184 KWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSM---SQYC 260 (526)
Q Consensus 184 ~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~---~~y~ 260 (526)
+.+++++.|++..++. +.+.|+ .+..|.+.....+ .-.|+|+ .+.+||. ...+
T Consensus 250 ~~~~~~~~i~~~~vt~-------------~~~~P~--~~~~l~~~~~~~~------~~~~~lr---~~~~gG~~~~~~~~ 305 (552)
T PRK09274 250 DPAKLFAAIERYGVTN-------------LFGSPA--LLERLGRYGEANG------IKLPSLR---RVISAGAPVPIAVI 305 (552)
T ss_pred CHHHHHHHHHHcCCeE-------------EeccHH--HHHHHHHHhhhcC------CCCchhh---EEEecCCcCCHHHH
Confidence 3456677777766332 333444 5555555443211 1235677 4455543 4566
Q ss_pred HHHHHHhC-CCCeeccccccCCcee-ee-ecCC------CC-CCCC--cceecCCCceEEEeeeCCCCCccccCCceecc
Q 009765 261 SKIKYYAG-EVPVLGGDYFASECYV-GI-NLDI------AQ-PPQT--TRFVMLPTAAYFEFLPFDMEKNEAVGEETVDF 328 (526)
Q Consensus 261 ~~l~~~~g-~v~v~~~~Y~aSEg~i-~i-~~~~------~~-~~~~--~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l 328 (526)
+++++.++ +++++ +.||+||+.. +. .... .. .... ......++ .-+..+++.+. +.+..-..
T Consensus 306 ~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~-~~~~ivd~~~~----~~~~~~~~ 379 (552)
T PRK09274 306 ERFRAMLPPDAEIL-TPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDG-VEVRIIAISDA----PIPEWDDA 379 (552)
T ss_pred HHHHHHcCCCceEE-ccccccccceeEeecchhhhccccccccCCCCcccCccCCC-ceEEEEecccc----cccccccc
Confidence 78888886 48999 9999999743 21 1100 00 0000 01112233 33556664321 00000012
Q ss_pred ccccCCceEEEEEccC---------------------CCeecceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCH
Q 009765 329 SGVEIGKMYEVVVTTY---------------------RGFYRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISE 384 (526)
Q Consensus 329 ~ele~G~~yelVvTt~---------------------~GL~RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e 384 (526)
.++..|+.+||+|... .|-.+|+|||++++.. ...+.|+||.++ +.|++++.
T Consensus 380 ~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~----dG~l~~~GR~~d~i~~~G~~v~p 455 (552)
T PRK09274 380 LRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDA----QGRLWFCGRKAHRVETAGGTLYT 455 (552)
T ss_pred ccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEcc----CCcEEEEeccCCeEEECCEEECc
Confidence 4567899999999542 1224899999999863 457899999998 78999999
Q ss_pred HHHHHHHHHH
Q 009765 385 RDLMSAMESF 394 (526)
Q Consensus 385 ~~v~~av~~~ 394 (526)
.+|+.++.+.
T Consensus 456 ~eIE~~l~~~ 465 (552)
T PRK09274 456 IPCERIFNTH 465 (552)
T ss_pred HHHHHHHHhC
Confidence 9999888864
No 14
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.25 E-value=5.7e-10 Score=125.95 Aligned_cols=229 Identities=14% Similarity=0.076 Sum_probs=125.8
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCC---CCCCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA---QPPQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~---~~~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
++|+ .+.+||. ....+.+++.+| ++++ +.||.||+...+-.... .+.. ......| +.-.+.++.+
T Consensus 380 ~~Lr---~i~~~G~~l~~~~~~~~~~~~g-~~i~-~~yG~TE~~~~~~~~~~~~~~~~~-s~G~p~~-g~~~~i~d~~-- 450 (647)
T PTZ00237 380 SNLK---EIWCGGEVIEESIPEYIENKLK-IKSS-RGYGQTEIGITYLYCYGHINIPYN-ATGVPSI-FIKPSILSED-- 450 (647)
T ss_pred chhe---EEEecCccCCHHHHHHHHHhcC-CCEE-eeechHHhChhhhccCCCCCCCCC-CCccCcC-CceEEEECCC--
Confidence 4666 4455543 233456777775 8999 99999997432211100 0000 1111222 2345666543
Q ss_pred CccccCCceeccccccCCceEEEEEccC------CCee---------------cceeCCEEEEeeecCCCCEEEEeeeCC
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY------RGFY---------------RYRLGDIVKVVDFYNSSPQVEFVMRAP 375 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~------~GL~---------------RYr~GDvV~v~g~~~~~P~i~f~gR~~ 375 (526)
+ .++..|+.+||+++.. .|+| .|+|||++++. ..-.+.|+||.+
T Consensus 451 ------g-----~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d----~dG~l~i~GR~d 515 (647)
T PTZ00237 451 ------G-----KELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKD----ENGYYTIVSRSD 515 (647)
T ss_pred ------C-----CCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEEC----CCCeEEEEeccC
Confidence 2 3456899999999742 4454 29999999886 346789999999
Q ss_pred C---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHH
Q 009765 376 K---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLED 451 (526)
Q Consensus 376 ~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~ 451 (526)
+ +.|++++..+|+++|.+. + + +.+-+++. +........+.||-+..+......+ .+++.++|.+
T Consensus 516 d~i~~~G~rI~p~eIE~~l~~~-p------~--V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~---~~~l~~~i~~ 583 (647)
T PTZ00237 516 DQIKISGNKVQLNTIETSILKH-P------L--VLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSID---LNKLKNEINN 583 (647)
T ss_pred CEEEECCEEeCHHHHHHHHHhC-C------C--ceeeEEEeeEcCCCCCEEEEEEEeccCccccCCC---HHHHHHHHHH
Confidence 9 789999999999999864 2 2 33433332 1111112334566554210000112 1223333333
Q ss_pred HhChhHHhhhhcC-CCCCcEEEEeCC---CcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhc
Q 009765 452 AFGSIYKVQRDRG-EISPLSVSIVKP---GTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEG 513 (526)
Q Consensus 452 ~Ln~~Y~~~R~~~-~l~p~~v~~v~~---g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 513 (526)
.+ ..+ .+ .-.|-+|.+|+. -.-.+.++..+.+=....++..|..+.|++.++.|++
T Consensus 584 ~~-----~~~-l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (647)
T PTZ00237 584 II-----TQD-IESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDSNYQLPDNVNDSEIFYKIKE 643 (647)
T ss_pred HH-----Hhh-cCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCCCCCCCccccCHHHHHHHHH
Confidence 22 111 22 235666777653 1111223333322122347888999999999998865
No 15
>PLN02654 acetate-CoA ligase
Probab=99.25 E-value=5.4e-09 Score=118.41 Aligned_cols=225 Identities=13% Similarity=0.070 Sum_probs=122.6
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCC--CCeeccccccCCcee-eeecCC----CCCCCCcceecCCCceEEEeee
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGE--VPVLGGDYFASECYV-GINLDI----AQPPQTTRFVMLPTAAYFEFLP 312 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~--v~v~~~~Y~aSEg~i-~i~~~~----~~~~~~~~~~l~~~~~f~EFip 312 (526)
+.|+ .+.+||. ....+.+.+.+|+ +++. +.||.||+.. .+-..+ ..+.. . ....++. =...++
T Consensus 397 ~~Lr---~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~-~~yg~TE~g~~~~~~~~~~~~~~~gs-~-G~p~~g~-~v~i~d 469 (666)
T PLN02654 397 KSLR---VLGSVGEPINPSAWRWFFNVVGDSRCPIS-DTWWQTETGGFMITPLPGAWPQKPGS-A-TFPFFGV-QPVIVD 469 (666)
T ss_pred hhee---EEEEecCCCCHHHHHHHHHHhCCCCCcee-ccccccccCCeeeccCCCCCCCCCCc-c-CCCCCCc-eEEEEC
Confidence 3566 4445443 2334556677764 7888 9999999632 111001 11111 1 1122222 234444
Q ss_pred CCCCCccccCCceeccccccCCceEEEEEccC-----CCee----------------cceeCCEEEEeeecCCCCEEEEe
Q 009765 313 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY----------------RYRLGDIVKVVDFYNSSPQVEFV 371 (526)
Q Consensus 313 ~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~-----~GL~----------------RYr~GDvV~v~g~~~~~P~i~f~ 371 (526)
.+ + .++..|+.+||+|... .|+| -|+|||++++.. .-.+.|+
T Consensus 470 ~~--------g-----~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~----dG~l~i~ 532 (666)
T PLN02654 470 EK--------G-----KEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDK----DGYYWLT 532 (666)
T ss_pred CC--------C-----CCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECC----CCcEEEe
Confidence 32 2 2345677899999751 2222 289999998873 4578999
Q ss_pred eeCCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHHH
Q 009765 372 MRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCS 447 (526)
Q Consensus 372 gR~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~ 447 (526)
||.++ +.|++++..+|+.+|.+. .+ +.+-+|+. +..........||.+.++ ...+.+..+++.+
T Consensus 533 GR~dd~I~~~G~ri~p~EIE~~l~~~-------p~--V~eaaVvg~~d~~~ge~~~a~Vvl~~~---~~~~~~l~~~l~~ 600 (666)
T PLN02654 533 GRVDDVINVSGHRIGTAEVESALVSH-------PQ--CAEAAVVGIEHEVKGQGIYAFVTLVEG---VPYSEELRKSLIL 600 (666)
T ss_pred eeccCeEEeCCEEECHHHHHHHHHhC-------CC--eeeEEEEeeEcCCCCeEEEEEEEECCC---CCCCHHHHHHHHH
Confidence 99998 889999999999999854 23 44544432 211112234567766543 1122222223333
Q ss_pred HHHHHhChhHHhhhhcCCCCCcEEEEeC---CCcHHHHHHHHH---HcCCCCCCCCCCcccCCHhHHHHHhc
Q 009765 448 SLEDAFGSIYKVQRDRGEISPLSVSIVK---PGTFDRLLQVAI---EKGAPASQYKPPKIVRNREIVEFMEG 513 (526)
Q Consensus 448 ~ld~~Ln~~Y~~~R~~~~l~p~~v~~v~---~g~f~~~~~~~~---~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 513 (526)
.+.+.| .....|-.|.+|+ ...=.+.+++.+ ..|. ..+++.+..+.|++.++.++.
T Consensus 601 ~~~~~L---------~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 662 (666)
T PLN02654 601 TVRNQI---------GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ-LDELGDTSTLADPGVVDQLIA 662 (666)
T ss_pred HHHHhC---------CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC-CCCCCCcccccCHHHHHHHHH
Confidence 333333 2234566777763 111112223222 2332 226777888999998887764
No 16
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.24 E-value=1.2e-10 Score=128.25 Aligned_cols=168 Identities=13% Similarity=0.019 Sum_probs=100.4
Q ss_pred HHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCCCceEEEEecCch---hhhH
Q 009765 184 KWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSM---SQYC 260 (526)
Q Consensus 184 ~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~---~~y~ 260 (526)
+.+++++.|++..++. +.+.|+ .+..|.+...+. ....-.++|+ .++.||. ...+
T Consensus 283 ~~~~~~~~i~~~~vt~-------------~~~~P~--~~~~l~~~~~~~----~~~~~~~~lr---~i~~gG~~l~~~~~ 340 (549)
T PRK07788 283 DPEATLEDIAKHKATA-------------LVVVPV--MLSRILDLGPEV----LAKYDTSSLK---IIFVSGSALSPELA 340 (549)
T ss_pred CHHHHHHHHHHhCCcE-------------EEEHHH--HHHHHHhCcccc----cCCCCCCcee---EEEEeCCCCCHHHH
Confidence 3456667777766322 443454 444444433220 0111235666 4454442 3555
Q ss_pred HHHHHHhCCCCeeccccccCCceeeeecCCCC---CCCCcceecCCCceEEEeeeCCCCCccccCCceeccccccCCceE
Q 009765 261 SKIKYYAGEVPVLGGDYFASECYVGINLDIAQ---PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMY 337 (526)
Q Consensus 261 ~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~---~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l~ele~G~~y 337 (526)
+++++.++ ++++ +.||+||+.+..-..+.. .+. ......++ .-+++++.+. .++..|+.+
T Consensus 341 ~~~~~~~~-~~l~-~~YG~TE~~~~~~~~~~~~~~~~~-~vG~~~~~-~~~~i~d~~~-------------~~~~~g~~G 403 (549)
T PRK07788 341 TRALEAFG-PVLY-NLYGSTEVAFATIATPEDLAEAPG-TVGRPPKG-VTVKILDENG-------------NEVPRGVVG 403 (549)
T ss_pred HHHHHHhC-ccce-eccCcchhchhhccChhhhhhcCC-CcccCCCC-cEEEEECCCc-------------CCCCCCCeE
Confidence 67777775 7888 999999974321111110 010 11122233 3456666442 235679999
Q ss_pred EEEEccCCCeec-------------ceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 338 EVVVTTYRGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 338 elVvTt~~GL~R-------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
||+|++..-+.+ |+|||+++... .-.+.|+||.++ +.|+|+...+|++++.+.
T Consensus 404 el~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 472 (549)
T PRK07788 404 RIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDE----DGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGH 472 (549)
T ss_pred EEEEeCCCccccccCCCcccccCCceecCceEEEcC----CCCEEEeccCcceEEECCEEECHHHHHHHHHhC
Confidence 999998543333 68999988763 457899999998 889999999999988753
No 17
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.24 E-value=1.2e-09 Score=120.32 Aligned_cols=154 Identities=15% Similarity=0.180 Sum_probs=95.7
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCcee-eeecCCCCCC---CCcceecCCCceEEEeeeCC
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQPP---QTTRFVMLPTAAYFEFLPFD 314 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~~~~~~~---~~~~~~l~~~~~f~EFip~~ 314 (526)
.|+++ ++++||. ...++++++.+ +++++ +.||+||+.. +... +..+. ........++ .-++.++++
T Consensus 311 ~~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~-~~~~~~~~~~~~G~~~~~-~~v~i~d~~ 383 (547)
T PRK13295 311 VSSLR---TFLCAGAPIPGALVERARAAL-GAKIV-SAWGMTENGAVTLTK-LDDPDERASTTDGCPLPG-VEVRVVDAD 383 (547)
T ss_pred cccce---EEEEecCCCCHHHHHHHHHHh-CCCeE-EeccCCCCCCeeecc-CCCcchhccCccccccCC-cEEEEECCC
Confidence 45677 4454442 45567777778 59999 9999999733 3211 11000 0000112222 335666543
Q ss_pred CCCccccCCceeccccccCCceEEEEEccC---CCee-c-----------ceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 315 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-R-----------YRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-R-----------Yr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
+ .++..|+.+||+|++. .|.| | |+|||++++. ...++.|.||.++
T Consensus 384 --------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~----~~g~l~~~gR~~~~i~ 446 (547)
T PRK13295 384 --------G-----APLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARID----ADGYIRISGRSKDVII 446 (547)
T ss_pred --------C-----CCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEc----CCceEEEEeccCCeEE
Confidence 1 3456899999999874 3433 2 9999999986 3468999999998
Q ss_pred cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee--cCCCCCceEEEEEEee
Q 009765 377 SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT--NLESSPKKLMIFVEIR 429 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~--~~~~~~~~y~l~vE~~ 429 (526)
+.|+|+...+|+.+|.+. .+ +.+.+|+. +... ......+|+..
T Consensus 447 ~~G~~v~p~~IE~~l~~~-------~~--v~~~~v~~~~~~~~-g~~~~~~v~~~ 491 (547)
T PRK13295 447 RGGENIPVVEIEALLYRH-------PA--IAQVAIVAYPDERL-GERACAFVVPR 491 (547)
T ss_pred ECCEEECHHHHHHHHHhC-------CC--eeeEEEEeeecCCC-CcEEEEEEEeC
Confidence 789999999999988753 23 45655543 2211 23455677664
No 18
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.23 E-value=3e-09 Score=117.83 Aligned_cols=129 Identities=16% Similarity=0.149 Sum_probs=82.8
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCce-eee-ecCC-CCCCCCcceecCCCceEEEeeeCCC
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECY-VGI-NLDI-AQPPQTTRFVMLPTAAYFEFLPFDM 315 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~-i~i-~~~~-~~~~~~~~~~l~~~~~f~EFip~~~ 315 (526)
+++|+ .+++||. ......+++.+| ++++ ..||+||.. +.+ +... ...++.... ..|+ ..+++++.+.
T Consensus 322 ~~~lr---~~~~gG~~l~~~~~~~~~~~~g-~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~g-~~~~i~d~~~ 394 (570)
T PRK04319 322 LSSLR---HILSVGEPLNPEVVRWGMKVFG-LPIH-DNWWMTETGGIMIANYPAMDIKPGSMGK-PLPG-IEAAIVDDQG 394 (570)
T ss_pred cccce---EEEEcccCCCHHHHHHHHHHhC-CCeE-eceeecccCCEEEecCCCCCCCCCcCcC-CCCC-CEEEEECCCC
Confidence 45677 4455543 344456667674 8898 999999973 222 1110 111111111 2233 4566776542
Q ss_pred CCccccCCceeccccccCCceEEEEEccC-----CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC-
Q 009765 316 EKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 376 (526)
Q Consensus 316 ~~~~~~~~~~l~l~ele~G~~yelVvTt~-----~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 376 (526)
.++.+|+.+||+|+.. .|.| -|+|||++++.. .-.+.|+||.++
T Consensus 395 -------------~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~----~g~l~~~GR~~d~ 457 (570)
T PRK04319 395 -------------NELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDE----DGYFWFQGRVDDV 457 (570)
T ss_pred -------------CCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECC----CeeEEEEecCCCE
Confidence 2357899999999752 2332 389999999863 347889999998
Q ss_pred --cceeecCHHHHHHHHHHH
Q 009765 377 --SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 --i~gEk~~e~~v~~av~~~ 394 (526)
+.|+++++.+|++++.+.
T Consensus 458 i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 458 IKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred EEECCEEECHHHHHHHHhhC
Confidence 779999999999988764
No 19
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.22 E-value=2.9e-09 Score=117.71 Aligned_cols=127 Identities=16% Similarity=0.208 Sum_probs=83.1
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCC--CCCCcceecCCCceEEEeeeCCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQ--PPQTTRFVMLPTAAYFEFLPFDMEK 317 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~--~~~~~~~~l~~~~~f~EFip~~~~~ 317 (526)
+.++ +++.||. ....+.+++.+ +++++ ..||+||+...+...+.. .+. ......+ +..++.++++.
T Consensus 326 ~~lr---~v~~gG~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~-~vG~~~~-~~~v~i~d~~~-- 396 (562)
T PRK05677 326 SALK---LTLSGGMALQLATAERWKEVT-GCAIC-EGYGMTETSPVVSVNPSQAIQVG-TIGIPVP-STLCKVIDDDG-- 396 (562)
T ss_pred hhce---EEEEcCccCCHHHHHHHHHHc-CCCee-ccCCccccCcceeecCccCCCCC-ccCccCC-CCEEEEECCCC--
Confidence 4666 4455543 34446667666 58999 999999974322211111 111 1122333 34567776432
Q ss_pred ccccCCceeccccccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c
Q 009765 318 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 377 (526)
Q Consensus 318 ~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i 377 (526)
.++..|+.+||+|++. .|.| -|+|||++++.. .-.+.|.||.++ +
T Consensus 397 -----------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~d~i~~ 461 (562)
T PRK05677 397 -----------NELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE----DGYMRIVDRKKDMILV 461 (562)
T ss_pred -----------CCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC----CCcEEEEecCcCeEEe
Confidence 2356899999999863 2222 289999999884 357899999998 7
Q ss_pred ceeecCHHHHHHHHHH
Q 009765 378 SFEIISERDLMSAMES 393 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~ 393 (526)
.|++++..+|+.+|.+
T Consensus 462 ~G~~i~p~eiE~~l~~ 477 (562)
T PRK05677 462 SGFNVYPNELEDVLAA 477 (562)
T ss_pred CCEEECHHHHHHHHHh
Confidence 8999999999998875
No 20
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.21 E-value=5.9e-10 Score=120.77 Aligned_cols=130 Identities=12% Similarity=0.053 Sum_probs=85.2
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCC---CCCCCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDI---AQPPQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~---~~~~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
++++ ++.+||. ...++.+++.|++++++ +.||+||+........ ............++ .-++.++++
T Consensus 264 ~~l~---~~~~gG~~~~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~i~~~~-- 336 (497)
T PRK06145 264 DSLA---WCIGGGEKTPESRIRDFTRVFTRARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGRALAH-VEIRIADGA-- 336 (497)
T ss_pred ccce---EEEecCCCCCHHHHHHHHHHcCCCceE-EeecCcccCCcceeccCccccccCCCcccCCCC-ceEEEECCC--
Confidence 5666 4455543 35567788888889999 9999999854221110 11000011222333 345556533
Q ss_pred CccccCCceeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 377 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i 377 (526)
+ .++..|+.+||++++. .|.| .|+|||+++... .-.+.|+||.++ +
T Consensus 337 ------~-----~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~ 401 (497)
T PRK06145 337 ------G-----RWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDE----EGFLYLTDRKKDMIIS 401 (497)
T ss_pred ------C-----CCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcC----CCcEEEeccccceEEe
Confidence 2 2345788999999874 3444 399999998863 347899999998 7
Q ss_pred ceeecCHHHHHHHHHHH
Q 009765 378 SFEIISERDLMSAMESF 394 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~~ 394 (526)
.|+++...+|+.++.+.
T Consensus 402 ~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 402 GGENIASSEVERVIYEL 418 (497)
T ss_pred CCeEECHHHHHHHHHhC
Confidence 89999999999988764
No 21
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.21 E-value=9.1e-10 Score=121.44 Aligned_cols=130 Identities=17% Similarity=0.141 Sum_probs=83.7
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCcee--eeecCCCC-CCCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDIAQ-PPQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i--~i~~~~~~-~~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
++|+ .+++||. ....+++++.+++++++ +.||+||+.. +++..... ....... ..++. =+..++.+.
T Consensus 299 ~~lr---~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~g~-~v~i~d~~~- 371 (539)
T PRK06334 299 PSLR---FVVIGGDAFKDSLYQEALKTFPHIQLR-QGYGTTECSPVITINTVNSPKHESCVGM-PIRGM-DVLIVSEET- 371 (539)
T ss_pred cccc---EEEECCccCCHHHHHHHHHHCCCCeEE-ecccccccCceEEeccCCCCCCCCcCce-ecCCC-EEEEEcCCC-
Confidence 5677 4455543 35557788888789999 9999999743 32211000 0000111 22232 233444322
Q ss_pred CccccCCceeccccccCCceEEEEEccC---CCee---------------cceeCCEEEEeeecCCCCEEEEeeeCCC--
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 376 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~---------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-- 376 (526)
+ .++..|+.+||+|... .|.| -|+|||++++.. .-.+.|+||.++
T Consensus 372 ------~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~----~G~l~~~GR~~d~i 436 (539)
T PRK06334 372 ------K-----VPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDR----HGELFLKGRLSRFV 436 (539)
T ss_pred ------C-----ccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECC----CCeEEEEeccCCeE
Confidence 2 2456899999999653 2211 499999998863 457889999998
Q ss_pred -cceeecCHHHHHHHHHHH
Q 009765 377 -SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 -i~gEk~~e~~v~~av~~~ 394 (526)
+.|++++..+|+.+|.+.
T Consensus 437 k~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 437 KIGAEMVSLEALESILMEG 455 (539)
T ss_pred EECCEEECHHHHHHHHHHc
Confidence 889999999999999864
No 22
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.21 E-value=2.4e-09 Score=118.39 Aligned_cols=169 Identities=12% Similarity=0.130 Sum_probs=102.5
Q ss_pred HHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCCCceEEEEecCch---hhhHH
Q 009765 185 WEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSM---SQYCS 261 (526)
Q Consensus 185 w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~---~~y~~ 261 (526)
.+++++.|++..++. +.+.|+ .+..|.+.... ....-++.++ ++..||. ...++
T Consensus 281 ~~~~~~~i~~~~~t~-------------~~~~P~--~~~~l~~~~~~-----~~~~~~~~lr---~~~~gg~~l~~~~~~ 337 (560)
T PLN02574 281 ASDMVKVIDRFKVTH-------------FPVVPP--ILMALTKKAKG-----VCGEVLKSLK---QVSCGAAPLSGKFIQ 337 (560)
T ss_pred HHHHHHHHHHcCCeE-------------EecCCH--HHHHHHhCccc-----cccCccccce---EEEEecccCCHHHHH
Confidence 456677777777333 444554 34334332211 0011234666 3344442 35556
Q ss_pred HHHHHhCCCCeeccccccCCcee-eee-cCCCC-CCCCcceecCCCceEEEeeeCCCCCccccCCceeccccccCCceEE
Q 009765 262 KIKYYAGEVPVLGGDYFASECYV-GIN-LDIAQ-PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYE 338 (526)
Q Consensus 262 ~l~~~~g~v~v~~~~Y~aSEg~i-~i~-~~~~~-~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l~ele~G~~ye 338 (526)
++.+.+++++++ ..||+||+.. ... ..... ..........+ ..-.+.+++++ + .++..|+.+|
T Consensus 338 ~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~-~~~v~i~d~~~-------g-----~~~~~g~~Ge 403 (560)
T PLN02574 338 DFVQTLPHVDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGLLAP-NMQAKVVDWST-------G-----CLLPPGNCGE 403 (560)
T ss_pred HHHHHCCCCcEE-ecccccccCceeecCCCccccCCCCceeeeCC-CcEEEEEeCCC-------C-----cCCCCCCCeE
Confidence 777778789999 8999999743 211 11111 10001222333 34567777543 2 2456899999
Q ss_pred EEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 339 VVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 339 lVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
|+|+.. .|.| -|+|||++++.. .-.+.|+||.++ +.|++++..+|+.++.+.
T Consensus 404 i~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~ 475 (560)
T PLN02574 404 LWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIVDRLKEIIKYKGFQIAPADLEAVLISH 475 (560)
T ss_pred EEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEEecchhheEECCEEECHHHHHHHHHhC
Confidence 999863 2222 389999999873 457899999998 889999999999888753
No 23
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.19 E-value=4.9e-09 Score=113.65 Aligned_cols=132 Identities=16% Similarity=0.199 Sum_probs=86.1
Q ss_pred ccCCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeee-cC-CCCCCCCcceecCCCceEEEeeeCC
Q 009765 240 KLWPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGIN-LD-IAQPPQTTRFVMLPTAAYFEFLPFD 314 (526)
Q Consensus 240 ~lWP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~-~~-~~~~~~~~~~~l~~~~~f~EFip~~ 314 (526)
..+++++ ++.+||. ....+.+++.++ ++++ ..||+||+..... .. ..+... ......+ ...+..++++
T Consensus 266 ~~~~~lr---~~~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~-~~G~~~~-~~~v~i~d~~ 338 (504)
T PRK07514 266 EAAAHMR---LFISGSAPLLAETHREFQERTG-HAIL-ERYGMTETNMNTSNPYDGERRAG-TVGFPLP-GVSLRVTDPE 338 (504)
T ss_pred cccccee---eEEecCCCCCHHHHHHHHHHhC-Ccce-eecccccccccccCCccccccCc-ccccCCC-CcEEEEEECC
Confidence 3455777 5555543 344466777674 7888 8999999843221 11 111111 1122233 3456777744
Q ss_pred CCCccccCCceeccccccCCceEEEEEccC---CCeec--------------ceeCCEEEEeeecCCCCEEEEeeeCCC-
Q 009765 315 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR--------------YRLGDIVKVVDFYNSSPQVEFVMRAPK- 376 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~R--------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~- 376 (526)
+ + ..+..|+.+||+|++. .|+|. |+|||+++... .-.+.|.||.++
T Consensus 339 ~-------~-----~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~~~ 402 (504)
T PRK07514 339 T-------G-----AELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RGYVHIVGRGKDL 402 (504)
T ss_pred C-------C-----CCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----CccEEEeccccce
Confidence 3 2 2356889999999874 44543 89999999873 346899999998
Q ss_pred --cceeecCHHHHHHHHHHH
Q 009765 377 --SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 --i~gEk~~e~~v~~av~~~ 394 (526)
+.|+++...+|+.++.+.
T Consensus 403 i~~~G~~i~~~~IE~~l~~~ 422 (504)
T PRK07514 403 IISGGYNVYPKEVEGEIDEL 422 (504)
T ss_pred EEeCCeEECHHHHHHHHHhC
Confidence 889999999999988753
No 24
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.19 E-value=7.5e-10 Score=121.66 Aligned_cols=156 Identities=17% Similarity=0.203 Sum_probs=92.8
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCcee-eeecCCCCC--CCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQP--PQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~~~~~~--~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
+.++ +++.||. ....+.+++.++ ++++ ..||.||+.. +.......+ +....+ ..+. .-++....++.
T Consensus 312 ~~l~---~i~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~v~~~d~~ 384 (541)
T TIGR03205 312 SSLA---TIGSGGAPLPVEVANFFERKTG-LKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGL-MLPG-IELDVVSLDDP 384 (541)
T ss_pred cccc---eEEEccccCCHHHHHHHHHHhC-CCee-cccccccCCcccccCCCCCCCCCCCcce-eccC-ceeEEEecCCC
Confidence 4566 4455543 234456666674 8999 9999999843 211111100 111122 2222 23444443321
Q ss_pred CccccCCceeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 377 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i 377 (526)
+ .++..|+.+||+|++. .|.| +|+|||++++.. .-.+.|+||.++ +
T Consensus 385 ------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~i~GR~~~~i~~ 449 (541)
T TIGR03205 385 ------T-----KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT----DGYFFLVDRKKDMIIS 449 (541)
T ss_pred ------C-----ccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC----CceEEEEccccCeEEE
Confidence 2 2456799999999873 2333 699999999863 347889999998 8
Q ss_pred ceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCceEEEEEEee
Q 009765 378 SFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIR 429 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~ 429 (526)
.|+++++.+|+.++.+. .+ +.++++.. ...........++++.
T Consensus 450 ~G~~i~~~eIE~~l~~~-------~~--v~~~~v~~~~~~~~~~~~~~~v~~~ 493 (541)
T TIGR03205 450 GGFNVYPQMIEQAIYEH-------PG--VQEVIVIGIPDQYRGEAAKAFVKLR 493 (541)
T ss_pred CCEEECHHHHHHHHHhC-------CC--eeeEEEEecCCcccCceEEEEEEEC
Confidence 89999999999988753 22 44554442 2211223456777765
No 25
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.18 E-value=5.2e-09 Score=115.40 Aligned_cols=127 Identities=17% Similarity=0.123 Sum_probs=83.5
Q ss_pred CCceEEEEecCch-hhhHHHHHHHhCCCCeeccccccCCceeeeecC-CCCCCCCcceecCCCceEEEeeeCCCCCcccc
Q 009765 244 NVRYIKCVTTGSM-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLD-IAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAV 321 (526)
Q Consensus 244 ~L~~i~~~~~G~~-~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~-~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~ 321 (526)
+++ .+.+|+. ...++.+++.+ +++++ +.||+||+...+... +...+. ...... ...-+++++.+.
T Consensus 295 ~l~---~~~~g~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~-~vG~~~-~~~~~~i~d~~~------ 361 (542)
T PRK06155 295 RVR---VALGPGVPAALHAAFRERF-GVDLL-DGYGSTETNFVIAVTHGSQRPG-SMGRLA-PGFEARVVDEHD------ 361 (542)
T ss_pred ceE---EEEEcCCCHHHHHHHHHHc-CCCEE-eeecccccCccccCCCCCCCCC-CcCccC-CCceEEEECCCC------
Confidence 555 3335544 34456677777 48999 999999984322111 111111 111222 334567776432
Q ss_pred CCceeccccccCCceEEEEEccCC------Ce-------------ecceeCCEEEEeeecCCCCEEEEeeeCCC---cce
Q 009765 322 GEETVDFSGVEIGKMYEVVVTTYR------GF-------------YRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSF 379 (526)
Q Consensus 322 ~~~~l~l~ele~G~~yelVvTt~~------GL-------------~RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~g 379 (526)
.++..|+.+||+|++.. |. -+|+|||++++. ....+.|+||.++ +.|
T Consensus 362 -------~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~----~dG~l~i~GR~~d~i~~~G 430 (542)
T PRK06155 362 -------QELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRD----ADGWFRFVDRIKDAIRRRG 430 (542)
T ss_pred -------CCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEc----CCceEEEEecCCCEEEeCC
Confidence 24568899999998752 22 379999999986 3457899999998 889
Q ss_pred eecCHHHHHHHHHHH
Q 009765 380 EIISERDLMSAMESF 394 (526)
Q Consensus 380 Ek~~e~~v~~av~~~ 394 (526)
+|+++.+|++++.+.
T Consensus 431 ~~v~p~eIE~~l~~~ 445 (542)
T PRK06155 431 ENISSFEVEQVLLSH 445 (542)
T ss_pred EEECHHHHHHHHHhC
Confidence 999999999988763
No 26
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.17 E-value=1.4e-08 Score=114.06 Aligned_cols=229 Identities=14% Similarity=0.070 Sum_probs=122.3
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeee-ecCCCCC--C-CCcc-eecCCCceEEEeeeCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGI-NLDIAQP--P-QTTR-FVMLPTAAYFEFLPFD 314 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i-~~~~~~~--~-~~~~-~~l~~~~~f~EFip~~ 314 (526)
+.|+ .+.+||. ....+.+++.++ ++++ +.||.||....+ ...+..+ . ..+. ....++ .-++.++++
T Consensus 355 ~~lr---~i~~~Ge~l~~~~~~~~~~~~~-~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g-~~~~i~d~~ 428 (629)
T PRK10524 355 SSLR---ALFLAGEPLDEPTASWISEALG-VPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYG-YNVKLLNEV 428 (629)
T ss_pred hhee---EEEEeCCCCCHHHHHHHHHhcC-CCeE-eccccccccchhhcCCCCcccCcCCCCCcccCcCC-ceEEEEeCC
Confidence 4566 5555553 234456667774 8999 999999974211 1111100 0 0001 112222 235666642
Q ss_pred CCCccccCCceeccccccCCceEEEEEccC------CCee-----------------cceeCCEEEEeeecCCCCEEEEe
Q 009765 315 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY------RGFY-----------------RYRLGDIVKVVDFYNSSPQVEFV 371 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~G~~yelVvTt~------~GL~-----------------RYr~GDvV~v~g~~~~~P~i~f~ 371 (526)
+ + .++..|+.+||+|+.. .|+| -|+|||++++. ..-.+.|+
T Consensus 429 ~-------g-----~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d----~dG~l~i~ 492 (629)
T PRK10524 429 T-------G-----EPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRD----ADGYYFIL 492 (629)
T ss_pred C-------C-----CCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEc----CCCcEEEE
Confidence 2 2 2356899999999863 1221 39999999886 34578999
Q ss_pred eeCCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEeec-CCCCCceEEEEEEeecCccccCCCHHHHHHHHH
Q 009765 372 MRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTN-LESSPKKLMIFVEIREGCTKLRDSVAILRRCCS 447 (526)
Q Consensus 372 gR~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~-~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~ 447 (526)
||.++ +.|+++...+|+.+|.+. .+ +.+.+++.- ........+.||.+..+.. ..+....+.+.+
T Consensus 493 GR~dd~i~~~G~ri~p~eIE~~l~~~-------p~--V~e~~vvg~~d~~~g~~~~~~vv~~~~~~--~~~~~~~~~~~~ 561 (629)
T PRK10524 493 GRTDDVINVAGHRLGTREIEESISSH-------PA--VAEVAVVGVKDALKGQVAVAFVVPKDSDS--LADREARLALEK 561 (629)
T ss_pred EEecCeEEeCCEEeCHHHHHHHHHhC-------CC--cceEEEEccccCCCCeEEEEEEEECCCCc--cccccchHHHHH
Confidence 99998 889999999999999753 23 445554421 1111123345665543200 001011112233
Q ss_pred HHHHHhChhHHhhhhcC-CCCCcEEEEeC------CCcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhc
Q 009765 448 SLEDAFGSIYKVQRDRG-EISPLSVSIVK------PGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEG 513 (526)
Q Consensus 448 ~ld~~Ln~~Y~~~R~~~-~l~p~~v~~v~------~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 513 (526)
+|.+.+ ..+ .+ ...|-.|.+|+ .|-..+-.=+.+..|. ..+.+.-+.|++.++.++.
T Consensus 562 ~i~~~~-----~~~-l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~---~~~~~~~~~~~~~~~~~~~ 625 (629)
T PRK10524 562 EIMALV-----DSQ-LGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEGR---DPGDLTTIEDPAALQQIRQ 625 (629)
T ss_pred HHHHHH-----Hhh-cCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC---CCCCcccccCHHHHHHHHH
Confidence 333333 112 23 34666777764 2322221111122343 3445677789998888765
No 27
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.17 E-value=5e-09 Score=113.52 Aligned_cols=131 Identities=16% Similarity=0.179 Sum_probs=81.9
Q ss_pred cCCCCceEEEEecCch--hhhHHHHHHHhCCCCeeccccccCCceeeeecCCC-------CCCCCcceecCCCceEEEee
Q 009765 241 LWPNVRYIKCVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA-------QPPQTTRFVMLPTAAYFEFL 311 (526)
Q Consensus 241 lWP~L~~i~~~~~G~~--~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~-------~~~~~~~~~l~~~~~f~EFi 311 (526)
-+|.++ ..+.+|.. ....+++.+.+++++++ ..||+||+...+..... +......+ ..++ .-...+
T Consensus 256 ~~~~l~--~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~-~~~~-~~~~i~ 330 (502)
T TIGR01734 256 NYPHLT--HFLFCGEELPVKTAKALLERFPKATIY-NTYGPTEATVAVTSVKITQEILDQYPRLPIGF-AKPD-MNLFIM 330 (502)
T ss_pred cCCccc--EEEEcCCcCCHHHHHHHHHHCCCcEEE-eCccCCcceEEEEEEEccccccccCCcccccc-ccCC-CEEEEE
Confidence 356777 23344432 45567778888889999 99999997433221110 00000001 1112 122233
Q ss_pred eCCCCCccccCCceeccccccCCceEEEEEccC---CCee-----------------cceeCCEEEEeeecCCCCEEEEe
Q 009765 312 PFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-----------------RYRLGDIVKVVDFYNSSPQVEFV 371 (526)
Q Consensus 312 p~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-----------------RYr~GDvV~v~g~~~~~P~i~f~ 371 (526)
+.+ + ..+.+|+.+||+|++. .|.| -|+|||++++.. . .+.|+
T Consensus 331 ~~~--------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~----~-~l~i~ 392 (502)
T TIGR01734 331 DEE--------G-----EPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD----G-QLFYQ 392 (502)
T ss_pred CCC--------C-----CCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC----C-EEEEe
Confidence 322 2 2355789999999773 1211 389999999873 3 99999
Q ss_pred eeCCC---cceeecCHHHHHHHHHHH
Q 009765 372 MRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 372 gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
||.++ +.|+|+...+|+.++.+.
T Consensus 393 GR~~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 393 GRLDFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred ccccCeEEECcEEeCHHHHHHHHHcC
Confidence 99998 889999999999988864
No 28
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.17 E-value=3.9e-09 Score=116.84 Aligned_cols=158 Identities=14% Similarity=0.125 Sum_probs=96.4
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCCCC--cceecCCCceEEEeeeCCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQT--TRFVMLPTAAYFEFLPFDMEK 317 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~~~--~~~~l~~~~~f~EFip~~~~~ 317 (526)
++++ .++.||. ......+++.+ +++++ ..||+||+...+-..+..+... ......++ ..++.++.++.
T Consensus 336 ~~lr---~i~~gg~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~i~d~~~~- 408 (573)
T PRK05605 336 SGVR---NAFSGAMALPVSTVELWEKLT-GGLLV-EGYGLTETSPIIVGNPMSDDRRPGYVGVPFPD-TEVRIVDPEDP- 408 (573)
T ss_pred hhcc---EEEECCCcCCHHHHHHHHHHh-CCCee-cccccchhchhhhcCCcccCCcCCccccCCCC-CEEEEEcCCCC-
Confidence 4677 4455543 34456666666 48898 8999999843221111111100 01123334 46777776531
Q ss_pred ccccCCceeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cc
Q 009765 318 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SS 378 (526)
Q Consensus 318 ~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~ 378 (526)
+ ..+..|+.+||+|++. .|.| .|+|||++.... .-.+.|+||.++ +.
T Consensus 409 -----~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~gR~dd~i~~~ 474 (573)
T PRK05605 409 -----D-----ETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEE----DGFIRIVDRIKELIITG 474 (573)
T ss_pred -----C-----ccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcC----CCcEEEEeccccceeeC
Confidence 1 2356789999999864 3333 499999998863 347899999998 88
Q ss_pred eeecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCceEEEEEEeec
Q 009765 379 FEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIRE 430 (526)
Q Consensus 379 gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~ 430 (526)
|+++...+|++++... .+ +.+.+++. +.........++|++.+
T Consensus 475 G~~v~p~eIE~~l~~~-------~~--i~~~~v~~~~~~~~~~~~~~~vv~~~ 518 (573)
T PRK05605 475 GFNVYPAEVEEVLREH-------PG--VEDAAVVGLPREDGSEEVVAAVVLEP 518 (573)
T ss_pred CEEECHHHHHHHHHhC-------cc--cceEEEEeeecccCCeEEEEEEEECC
Confidence 9999999999988753 12 44544442 22122345567787754
No 29
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.16 E-value=7.8e-10 Score=121.68 Aligned_cols=125 Identities=18% Similarity=0.206 Sum_probs=83.4
Q ss_pred EEecCch---hhhHHHHHHHhCCCCeeccccccCCce-eeeecCCCCC---CCCcceecCCCceEEEeeeCCCCCccccC
Q 009765 250 CVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQP---PQTTRFVMLPTAAYFEFLPFDMEKNEAVG 322 (526)
Q Consensus 250 ~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~-i~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~~~~~~~~ 322 (526)
++..||. ...++.+++.+++++++ ..||+||+. ++........ ...... ..+ ...+++++.+.
T Consensus 294 ~i~~gg~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~d~~~------- 363 (542)
T PRK07786 294 VLSWGAAPASDTLLRQMAATFPEAQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGK-VIP-TVAARVVDENM------- 363 (542)
T ss_pred EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccceEecCcccccccCCCccc-cCC-CceEEEECCCC-------
Confidence 4455543 45668888888889999 999999973 2221111100 000111 223 34567777432
Q ss_pred CceeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecC
Q 009765 323 EETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIIS 383 (526)
Q Consensus 323 ~~~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~ 383 (526)
.++..|+.+||++... .|.| .|+|||+++... .-.+.|+||.++ +.|+++.
T Consensus 364 ------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~GR~~d~i~~~G~~v~ 433 (542)
T PRK07786 364 ------NDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVDRKKDMIISGGENIY 433 (542)
T ss_pred ------CCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEecccceEEeCCEEEC
Confidence 2356789999999763 3333 399999999863 347899999998 8899999
Q ss_pred HHHHHHHHHHH
Q 009765 384 ERDLMSAMESF 394 (526)
Q Consensus 384 e~~v~~av~~~ 394 (526)
..+|+.+|.+.
T Consensus 434 ~~eiE~~l~~~ 444 (542)
T PRK07786 434 CAEVENVLASH 444 (542)
T ss_pred HHHHHHHHHhC
Confidence 99999988753
No 30
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.16 E-value=4e-08 Score=110.41 Aligned_cols=227 Identities=12% Similarity=0.072 Sum_probs=120.9
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeee-ecCCCC-----CCCCcceecCCCceEEEeeeC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGI-NLDIAQ-----PPQTTRFVMLPTAAYFEFLPF 313 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i-~~~~~~-----~~~~~~~~l~~~~~f~EFip~ 313 (526)
+.|+ .+.+||. ....+.+++.++ ++++ +.||.||....+ ...+.. ..+.. ....++ .-+..++.
T Consensus 354 ~~lr---~~~~gGe~l~~~~~~~~~~~~~-~~~~-~~yG~TE~~~~~~~~~~~~~~~~~~~gs~-G~p~~g-~~v~i~d~ 426 (628)
T TIGR02316 354 SSLH---WLFLAGEPLDEPTAHWITDGLG-KPVI-DNYWQTETGWPVLAIMPGLDLKPVKLGSP-GLPMYG-YHLRVLDE 426 (628)
T ss_pred ccee---EEEEecCCCCHHHHHHHHHHhC-CCEE-ecccccccCceeecCCCCCCcCCCCCCCc-ccCcCC-ceEEEEEC
Confidence 5666 4444443 344456666674 8888 999999974322 111110 00101 112233 23455554
Q ss_pred CCCCccccCCceeccccccCCceEEEEEccC------CCee-----------------cceeCCEEEEeeecCCCCEEEE
Q 009765 314 DMEKNEAVGEETVDFSGVEIGKMYEVVVTTY------RGFY-----------------RYRLGDIVKVVDFYNSSPQVEF 370 (526)
Q Consensus 314 ~~~~~~~~~~~~l~l~ele~G~~yelVvTt~------~GL~-----------------RYr~GDvV~v~g~~~~~P~i~f 370 (526)
++ + .++..|+.+||+|+.. .|+| .|+|||+++... .-.+.|
T Consensus 427 ~~-------g-----~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~----dG~l~i 490 (628)
T TIGR02316 427 AT-------G-----RPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE----DGYTFI 490 (628)
T ss_pred CC-------C-----CCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC----CCcEEE
Confidence 32 2 2356789999999764 2222 399999998763 346899
Q ss_pred eeeCCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee--cCCCCCceEEEEEEeecCccccCCCHHHHHHH
Q 009765 371 VMRAPK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT--NLESSPKKLMIFVEIREGCTKLRDSVAILRRC 445 (526)
Q Consensus 371 ~gR~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~--~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~ 445 (526)
+||.++ +.|+++...+|+.+|.+. .+ +.+-+++. +... ...-+.||.+.++.. ..+.......
T Consensus 491 ~GR~dd~ik~~G~rv~~~eIE~~l~~~-------p~--V~ea~Vvg~~d~~~-g~~~~~~vv~~~~~~--~~~~~~~~~~ 558 (628)
T TIGR02316 491 LGRTDDVINVAGHRLGTREIEESVSSH-------PS--VAEVAVVGVHDELK-GQVAVVFAILKESDS--AGDAHDPHAV 558 (628)
T ss_pred EEcCcceEEeCCEEeCHHHHHHHHHhC-------CC--cceEEEEeeecCCC-CeEEEEEEEEcCCcc--cccccchHHH
Confidence 999998 889999999999998753 23 33544332 2211 123345665543210 0000001112
Q ss_pred HHHHHHHhChhHHhhhhcC-CCCCcEEEEeC---CCcHHHHHHHHHH---cCCCCCCCCCCcccCCHhHHHHHhc
Q 009765 446 CSSLEDAFGSIYKVQRDRG-EISPLSVSIVK---PGTFDRLLQVAIE---KGAPASQYKPPKIVRNREIVEFMEG 513 (526)
Q Consensus 446 ~~~ld~~Ln~~Y~~~R~~~-~l~p~~v~~v~---~g~f~~~~~~~~~---~G~~~~Q~K~Pr~~~~~~~~~~l~~ 513 (526)
.++|.+.+ ..+ .+ ...|-.|.+|+ ...-.+..+..+. .|.. .+.+..+.|++.++.+++
T Consensus 559 ~~~i~~~~-----~~~-L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~~~---~~~~~~~~~~~~~~~~~~ 624 (628)
T TIGR02316 559 ETGMMDCV-----VRQ-LGAVARPARVYFVAALPKTRSGKLLRRSIQALAEGRD---PGDLTTIDDPGALEQVRR 624 (628)
T ss_pred HHHHHHHH-----HHh-cCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcCCC---CCCcccccCHHHHHHHHH
Confidence 23333333 111 22 23566777764 2222233333332 3443 455667789998888754
No 31
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.16 E-value=1.2e-09 Score=118.58 Aligned_cols=128 Identities=17% Similarity=0.088 Sum_probs=81.8
Q ss_pred CCCceEEEEecCc--h-hhhHHHHHHHhCCCCeeccccccCCc-eee-eecCCCC-C--CCCcceecCCCceEEEeeeCC
Q 009765 243 PNVRYIKCVTTGS--M-SQYCSKIKYYAGEVPVLGGDYFASEC-YVG-INLDIAQ-P--PQTTRFVMLPTAAYFEFLPFD 314 (526)
Q Consensus 243 P~L~~i~~~~~G~--~-~~y~~~l~~~~g~v~v~~~~Y~aSEg-~i~-i~~~~~~-~--~~~~~~~l~~~~~f~EFip~~ 314 (526)
++++ .++.|| + ...++.+++.++..+++ +.||+||+ .++ .+..... . +. ......++ .-++.++++
T Consensus 281 ~~l~---~v~~~g~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~-~vG~~~~~-~~~~i~d~~ 354 (513)
T PRK07656 281 SSLR---LAVTGAASMPVALLERFESELGVDIVL-TGYGLSEASGVTTFNRLDDDRKTVAG-TIGTAIAG-VENKIVNEL 354 (513)
T ss_pred ccee---eEEecCCCCCHHHHHHHHHHcCCCceE-eEEccccCCCceeecCccccccccCC-CccccCCC-cEEEEECCC
Confidence 4566 444443 2 34556777777523888 99999998 332 2111000 0 00 11122333 345666533
Q ss_pred CCCccccCCceeccccccCCceEEEEEccCC---C----------eec----ceeCCEEEEeeecCCCCEEEEeeeCCC-
Q 009765 315 MEKNEAVGEETVDFSGVEIGKMYEVVVTTYR---G----------FYR----YRLGDIVKVVDFYNSSPQVEFVMRAPK- 376 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~G~~yelVvTt~~---G----------L~R----Yr~GDvV~v~g~~~~~P~i~f~gR~~~- 376 (526)
+ ..+..|+.+||+|++.. | .++ |+|||+++.. ..-.+.++||.++
T Consensus 355 --------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~----~~g~~~~~GR~~d~ 417 (513)
T PRK07656 355 --------G-----EEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLD----EEGYLYIVDRKKDM 417 (513)
T ss_pred --------C-----CCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEc----CCeeEEEEecccce
Confidence 1 34578999999998753 2 123 8999999886 3457899999998
Q ss_pred --cceeecCHHHHHHHHHH
Q 009765 377 --SSFEIISERDLMSAMES 393 (526)
Q Consensus 377 --i~gEk~~e~~v~~av~~ 393 (526)
+.|++++..+|+++|.+
T Consensus 418 i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 418 FIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred EEeCCEEeCHHHHHHHHHh
Confidence 88999999999998875
No 32
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.15 E-value=1.3e-08 Score=110.03 Aligned_cols=158 Identities=14% Similarity=0.130 Sum_probs=92.6
Q ss_pred CCCceEEEEecCchhhhHHHHHHHh-CCCCeeccccccCCcee--eeecCCCC-CCCCcceecCCCceEEEeeeCCCCCc
Q 009765 243 PNVRYIKCVTTGSMSQYCSKIKYYA-GEVPVLGGDYFASECYV--GINLDIAQ-PPQTTRFVMLPTAAYFEFLPFDMEKN 318 (526)
Q Consensus 243 P~L~~i~~~~~G~~~~y~~~l~~~~-g~v~v~~~~Y~aSEg~i--~i~~~~~~-~~~~~~~~l~~~~~f~EFip~~~~~~ 318 (526)
++++ .+.+||.......+++++ .+++++ +.||+||+.. +++..+.. ....+..-.......+++++.+
T Consensus 252 ~~l~---~~~~gG~~~~~~~~~~~~~~g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~---- 323 (488)
T PRK09088 252 RHLT---ALFTGGAPHAAEDILGWLDDGIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQ---- 323 (488)
T ss_pred ccce---EEEecCCCCCHHHHHHHHHhCCcee-eeecccccccccccCCCcccccccCCccccCCCCcEEEEECCC----
Confidence 4566 555665433223333333 259999 8999999732 32221110 0000111122233456777643
Q ss_pred cccCCceeccccccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cc
Q 009765 319 EAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SS 378 (526)
Q Consensus 319 ~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~ 378 (526)
+ .++..|+.+||+|++. .|.+ .|+|||++++.. ...+.|+||.++ +.
T Consensus 324 ----~-----~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~ 390 (488)
T PRK09088 324 ----G-----NDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVVDRKKDMFISG 390 (488)
T ss_pred ----C-----CCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEeccccceEEeC
Confidence 2 2356789999999873 2333 299999999973 357899999998 77
Q ss_pred eeecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCC-CCCceEEEEEEeec
Q 009765 379 FEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLE-SSPKKLMIFVEIRE 430 (526)
Q Consensus 379 gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~-~~~~~y~l~vE~~~ 430 (526)
|+|++..+|++++.+. .+ +.+.+++.... .....-.++|++..
T Consensus 391 G~~i~~~~iE~~l~~~-------~~--v~~~~v~~~~~~~~g~~~~~~v~~~~ 434 (488)
T PRK09088 391 GENVYPAEIEAVLADH-------PG--IRECAVVGMADAQWGEVGYLAIVPAD 434 (488)
T ss_pred CEEECHHHHHHHHHhC-------CC--cceEEEEeCCCccCCceeEEEEEECC
Confidence 9999999999988653 23 34555443221 11223346777653
No 33
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.14 E-value=9.6e-09 Score=111.11 Aligned_cols=130 Identities=13% Similarity=0.128 Sum_probs=80.1
Q ss_pred CCCCceEEEEecCc-h-hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCCC-------CcceecCCCceEEEeee
Q 009765 242 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQ-------TTRFVMLPTAAYFEFLP 312 (526)
Q Consensus 242 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~~-------~~~~~l~~~~~f~EFip 312 (526)
+|+++.+ +.+|+ . ....+.+.+.+++++++ ..||+||....+...+.++.. ...+ ..++.. ...++
T Consensus 259 ~~~l~~i--~~~G~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~-~~i~d 333 (503)
T PRK04813 259 LPNLTHF--LFCGEELPHKTAKKLLERFPSATIY-NTYGPTEATVAVTSIEITDEMLDQYKRLPIGY-AKPDSP-LLIID 333 (503)
T ss_pred CCCceEE--EEecCcCCHHHHHHHHHHCCCceEE-eCcccchheeEEEEEEecccccccCCCCcccc-cCCCCE-EEEEC
Confidence 4577733 33343 2 45667888888788999 999999963322111111100 0011 112211 12333
Q ss_pred CCCCCccccCCceeccccccCCceEEEEEccC--------------------CCeecceeCCEEEEeeecCCCCEEEEee
Q 009765 313 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY--------------------RGFYRYRLGDIVKVVDFYNSSPQVEFVM 372 (526)
Q Consensus 313 ~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~--------------------~GL~RYr~GDvV~v~g~~~~~P~i~f~g 372 (526)
.+ + ..+..|+.+||+|+.. .|.=-|+|||++++ . .-.+.|.|
T Consensus 334 ~~--------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~----~g~~~~~G 395 (503)
T PRK04813 334 EE--------G-----TKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E----DGLLFYQG 395 (503)
T ss_pred CC--------C-----CCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e----CCeEEEec
Confidence 22 2 2345788999999873 22113999999998 2 24788999
Q ss_pred eCCC---cceeecCHHHHHHHHHHH
Q 009765 373 RAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 373 R~~~---i~gEk~~e~~v~~av~~~ 394 (526)
|.++ +.|+|++..+|++++.+.
T Consensus 396 R~~d~i~~~G~~v~~~~iE~~l~~~ 420 (503)
T PRK04813 396 RIDFQIKLNGYRIELEEIEQNLRQS 420 (503)
T ss_pred cccceEEECcEEeCHHHHHHHHHhC
Confidence 9998 889999999999888753
No 34
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.13 E-value=1.5e-08 Score=111.15 Aligned_cols=134 Identities=17% Similarity=0.134 Sum_probs=83.7
Q ss_pred CCCeeccccccCCceeeeecCCCCCC-----CCcceecCCCceEEEeeeCCCCCccccCCceeccccccCCceEEEEEcc
Q 009765 269 EVPVLGGDYFASECYVGINLDIAQPP-----QTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTT 343 (526)
Q Consensus 269 ~v~v~~~~Y~aSEg~i~i~~~~~~~~-----~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l~ele~G~~yelVvTt 343 (526)
+++++ ..||+||+...+........ ..+.+.+. .....+++++++ + ..+..|+.+||+|++
T Consensus 319 ~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~i~d~~~-------~-----~~~~~g~~Gel~v~g 384 (540)
T PRK06164 319 GVPLT-GLYGSSEVQALVALQPATDPVSVRIEGGGRPAS-PEARVRARDPQD-------G-----ALLPDGESGEIEIRA 384 (540)
T ss_pred CCcee-cceeeccccceeeccCCCCCCcceeccCccccC-CCeEEEEecCCC-------C-----cCCCCCCeeEEEEec
Confidence 58999 99999998433221111000 01122222 334577777553 2 235689999999998
Q ss_pred C---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHHHHHhccccC
Q 009765 344 Y---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESFQMMLRNVMA 403 (526)
Q Consensus 344 ~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g 403 (526)
. .|.| -|+|||++++.. .-.+.|.||.++ +.|++++..+|++++.+. .+
T Consensus 385 ~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~-------~~ 453 (540)
T PRK06164 385 PSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEHALEAL-------PG 453 (540)
T ss_pred ccccccccCCchhhhhcccCCCceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHHHHHhC-------CC
Confidence 3 2211 499999998873 357889999998 889999999999988753 23
Q ss_pred ceEEEEEEeecCCCCCceEEEEEEee
Q 009765 404 VEIVEFAGYTNLESSPKKLMIFVEIR 429 (526)
Q Consensus 404 ~~l~~f~~~~~~~~~~~~y~l~vE~~ 429 (526)
+.+.+++..........+.+++..
T Consensus 454 --v~~~~v~~~~~~~~~~~~~~vv~~ 477 (540)
T PRK06164 454 --VAAAQVVGATRDGKTVPVAFVIPT 477 (540)
T ss_pred --ceeEEEEecCCCCceeEEEEEEeC
Confidence 445554432112123455677664
No 35
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.13 E-value=5.7e-09 Score=113.67 Aligned_cols=155 Identities=15% Similarity=0.091 Sum_probs=94.6
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCcee-eeecCC--CCCCCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDI--AQPPQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~~~--~~~~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
++++ .+++||. ...++++++.++ ++++ ..||+||+.. +..... ...+....+ ..++ .-++++++..
T Consensus 271 ~~l~---~v~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~~- 342 (509)
T PRK12406 271 SSLR---HVIHAAAPCPADVKRAMIEWWG-PVIY-EYYGSTESGAVTFATSEDALSHPGTVGK-AAPG-AELRFVDEDG- 342 (509)
T ss_pred Ccee---EEEEcCCCCCHHHHHHHHHHcC-CcEE-eeccccccCceEecCcccccccCCCcCc-cCCC-cEEEEECCCC-
Confidence 4566 4455542 456677888775 8888 9999999743 221000 001111122 2333 3456666431
Q ss_pred CccccCCceeccccccCCceEEEEEccCC----Cee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTYR----GFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~~----GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
.++..|+.+||+++... |.+ -|+|||++.... .-.+.|+||.++
T Consensus 343 ------------~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~d~ik 406 (509)
T PRK12406 343 ------------RPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCDRKRDMVI 406 (509)
T ss_pred ------------CCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEeecccceEE
Confidence 24568999999997642 333 278999998873 356889999998
Q ss_pred cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCceEEEEEEeec
Q 009765 377 SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIRE 430 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~ 430 (526)
++|+++...+|+.+|.+. .+ +.+.+++. +..........+++...
T Consensus 407 ~~G~~v~~~~IE~~l~~~-------~~--v~~~~v~~~~~~~~~~~~~~~v~~~~ 452 (509)
T PRK12406 407 SGGVNIYPAEIEAVLHAV-------PG--VHDCAVFGIPDAEFGEALMAVVEPQP 452 (509)
T ss_pred ECCEEECHHHHHHHHHhC-------CC--eeEEEEEeeeccccCceeEEEEEECC
Confidence 889999999999998753 23 33433322 22111245667888753
No 36
>PRK07529 AMP-binding domain protein; Validated
Probab=99.13 E-value=1.5e-08 Score=114.03 Aligned_cols=134 Identities=11% Similarity=0.105 Sum_probs=84.3
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCC-CCc-ceecCCCceEEEeeeCCCC
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP-QTT-RFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~-~~~-~~~l~~~~~f~EFip~~~~ 316 (526)
+++|+ .+++||. ....+++++.+ +++++ ++||+||+.......+.... ..+ .....|+ .-+.++..++.
T Consensus 332 ~~slr---~v~~gg~~l~~~l~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~-~~v~i~~~d~~ 405 (632)
T PRK07529 332 ISSLR---YALCGAAPLPVEVFRRFEAAT-GVRIV-EGYGLTEATCVSSVNPPDGERRIGSVGLRLPY-QRVRVVILDDA 405 (632)
T ss_pred ccceE---EEEEcCCCCCHHHHHHHHHHh-CCcEe-eeecccccCcccccCCccccccCCCcccccCC-ceEEEEEcCCC
Confidence 35666 4455542 34556777777 59999 99999998543322111100 000 1112233 23555544421
Q ss_pred CccccCCceeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 377 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i 377 (526)
+. ...++.+|+.+||+|++. .|.+ -|+|||++++.. .-.+.|+||.++ +
T Consensus 406 ------g~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~ 473 (632)
T PRK07529 406 ------GR--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDA----DGYFWLTGRAKDLIIR 473 (632)
T ss_pred ------Cc--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcC----CceEEEEecccCEEEe
Confidence 21 113467899999999763 2211 389999999873 457899999998 7
Q ss_pred ceeecCHHHHHHHHHH
Q 009765 378 SFEIISERDLMSAMES 393 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~ 393 (526)
.|+++++.+|++++.+
T Consensus 474 ~G~~i~p~eIE~~l~~ 489 (632)
T PRK07529 474 GGHNIDPAAIEEALLR 489 (632)
T ss_pred CCEEECHHHHHHHHHh
Confidence 8999999999998875
No 37
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.13 E-value=4.9e-09 Score=113.98 Aligned_cols=130 Identities=16% Similarity=0.187 Sum_probs=81.7
Q ss_pred CCCceEEEEecCc-h-hhhHHHHHHHhCCCCeeccccccCCce-eeeecCCCCC---CCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQP---PQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~v~~~~Y~aSEg~-i~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
++++ .++.+|+ + ....+.+++.+++++++ ..||+||+. ++....+... ...... ..++ .-+..++.+
T Consensus 286 ~~l~--~~~~gg~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~~~-- 358 (523)
T PRK08316 286 SSLR--KGYYGASIMPVEVLKELRERLPGLRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGR-PVLN-VETRVVDDD-- 358 (523)
T ss_pred ccce--EEEEcCCcCCHHHHHHHHHHcCCCcee-eeecccccCccccccCccccccccCCccc-CCCC-cEEEEEcCC--
Confidence 3555 2344443 2 35557788888789999 999999973 3321111100 000011 1122 223444432
Q ss_pred CccccCCceeccccccCCceEEEEEccCC---Cee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTYR---GFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 377 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~~---GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i 377 (526)
+ .++..|+.+||++++.+ |.| .|+|||+++... ...+.|+||.++ +
T Consensus 359 ------~-----~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~gR~~~~i~~ 423 (523)
T PRK08316 359 ------G-----NDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVDRKKDMIKT 423 (523)
T ss_pred ------C-----CCCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEecccccEEEe
Confidence 2 23457899999998742 222 399999999873 457899999998 7
Q ss_pred ceeecCHHHHHHHHHHH
Q 009765 378 SFEIISERDLMSAMESF 394 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~~ 394 (526)
.|+|++..+|++++.+.
T Consensus 424 ~G~~i~~~~iE~~l~~~ 440 (523)
T PRK08316 424 GGENVASREVEEALYTH 440 (523)
T ss_pred CCeEECHHHHHHHHHhC
Confidence 89999999999888653
No 38
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.12 E-value=8.1e-09 Score=116.53 Aligned_cols=226 Identities=15% Similarity=0.153 Sum_probs=124.2
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhC-CCCeeccccccCCceeeeecC-CCCCCCCcc-eecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAG-EVPVLGGDYFASECYVGINLD-IAQPPQTTR-FVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g-~v~v~~~~Y~aSEg~i~i~~~-~~~~~~~~~-~~l~~~~~f~EFip~~~~ 316 (526)
+.|+ ++.+||. ....+.+.+.++ +++++ ..||.||....+... +..+...+. ....++ .-+..++.+
T Consensus 383 ~sLr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g-~~~~ivd~~-- 455 (655)
T PRK03584 383 SALR---TIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQCRGLG-MAVEAWDED-- 455 (655)
T ss_pred hheE---EEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCCCcCC-ceeEEECCC--
Confidence 3555 5555543 344466677774 58888 999999963222111 000100011 112222 223445433
Q ss_pred CccccCCceeccccccCCceEEEEEccC-----CCee------c------------ceeCCEEEEeeecCCCCEEEEeee
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY------R------------YRLGDIVKVVDFYNSSPQVEFVMR 373 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~-----~GL~------R------------Yr~GDvV~v~g~~~~~P~i~f~gR 373 (526)
+. ++ .|+.+||+|... .|+| | |+|||++++.. .-.+.|+||
T Consensus 456 ------g~-----~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~i~GR 519 (655)
T PRK03584 456 ------GR-----PV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITE----HGGVVIYGR 519 (655)
T ss_pred ------CC-----CC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECC----CCeEEEEee
Confidence 22 24 688999999863 2322 1 78999998862 357899999
Q ss_pred CCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHH
Q 009765 374 APK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSL 449 (526)
Q Consensus 374 ~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~l 449 (526)
.|+ +.|+++...+|+.+|.+. .+ +.+-+++. +........+.||++..+ ...+....+++.+.+
T Consensus 520 ~dd~Ik~~G~rI~p~EIE~~l~~~-------p~--V~ea~vvg~~~~~~g~~~~a~vv~~~~---~~~~~~~~~~l~~~~ 587 (655)
T PRK03584 520 SDATLNRGGVRIGTAEIYRQVEAL-------PE--VLDSLVIGQEWPDGDVRMPLFVVLAEG---VTLDDALRARIRTTI 587 (655)
T ss_pred ccCeeecCcEEECHHHHHHHHHhC-------CC--cceEEEEeeEcCCCCEEEEEEEEECCC---CCCcHHHHHHHHHHH
Confidence 998 789999999999988753 23 33544332 221112355678887643 112222222333333
Q ss_pred HHHhChhHHhhhhcCCCCCcEEEEeC------CCc-HHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhc
Q 009765 450 EDAFGSIYKVQRDRGEISPLSVSIVK------PGT-FDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEG 513 (526)
Q Consensus 450 d~~Ln~~Y~~~R~~~~l~p~~v~~v~------~g~-f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 513 (526)
.+.| .....|-.|.+|+ .|- ..+.++. +..|...+|...+.-+.|++.++.+..
T Consensus 588 ~~~L---------~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (655)
T PRK03584 588 RTNL---------SPRHVPDKIIAVPDIPRTLSGKKVELPVKK-LLHGRPVKKAVNRDALANPEALDWFAD 648 (655)
T ss_pred HhhC---------CCCcCCCEEEECCCCCCCCCccchHHHHHH-HHcCCCCCCCCCcccccCHHHHHHHHH
Confidence 3333 1123566777764 221 2222222 234666666656777788888877643
No 39
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.11 E-value=3.5e-09 Score=116.84 Aligned_cols=128 Identities=15% Similarity=0.153 Sum_probs=82.6
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCC-CC--CCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA-QP--PQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~-~~--~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
|+++ ++++||. ....+++++.+ +++++ ..||+||+...+..... .. +....+ ..+ +.-++.++.+
T Consensus 325 ~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~~~~-- 395 (560)
T PRK08974 325 SSLK---LSVGGGMAVQQAVAERWVKLT-GQYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGL-PVP-STEIKLVDDD-- 395 (560)
T ss_pred ccee---EEEecCccCCHHHHHHHHHHh-CCcEE-eeecccccCceeeccCCCCcccCCcccc-CcC-CCEEEEECCC--
Confidence 4566 5555553 23345666666 58999 89999997432211111 00 111112 222 2346666643
Q ss_pred CccccCCceeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 377 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i 377 (526)
+ .++..|+.+||+|++. .|.| .|+|||+++... ...+.|+||.++ +
T Consensus 396 ------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~ 460 (560)
T PRK08974 396 ------G-----NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVDRKKDMILV 460 (560)
T ss_pred ------C-----CCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEecccceEEe
Confidence 2 2456899999999874 3333 299999999863 457899999998 7
Q ss_pred ceeecCHHHHHHHHHHH
Q 009765 378 SFEIISERDLMSAMESF 394 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~~ 394 (526)
.|++++..+|+.+|.+.
T Consensus 461 ~G~~i~~~~IE~~l~~~ 477 (560)
T PRK08974 461 SGFNVYPNEIEDVVMLH 477 (560)
T ss_pred CCEEECHHHHHHHHHhC
Confidence 89999999999998753
No 40
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.11 E-value=2.3e-09 Score=117.98 Aligned_cols=168 Identities=15% Similarity=0.077 Sum_probs=100.7
Q ss_pred HHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCCCceEEEEecCch---hhhH
Q 009765 184 KWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSM---SQYC 260 (526)
Q Consensus 184 ~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~---~~y~ 260 (526)
+++++++.|++..++. +.+.|+ .+..|.+...+ . ....-+++++ .++.||. ...+
T Consensus 272 ~~~~~~~~i~~~~vt~-------------~~~~P~--~~~~l~~~~~~-~---~~~~~~~~lr---~i~~gG~~l~~~~~ 329 (537)
T PRK13382 272 DPEATLDLIDRHRATG-------------LAVVPV--MFDRIMDLPAE-V---RNRYSGRSLR---FAAASGSRMRPDVV 329 (537)
T ss_pred CHHHHHHHHHHhCCEE-------------EEehHH--HHHHHHcCCch-h---cccCCcccee---EEEEcCCCCCHHHH
Confidence 3566777777776333 333443 44444332211 0 1111234666 4455543 4556
Q ss_pred HHHHHHhCCCCeeccccccCCceeeeecCCCC---CCCCcceecCCCceEEEeeeCCCCCccccCCceeccccccCCceE
Q 009765 261 SKIKYYAGEVPVLGGDYFASECYVGINLDIAQ---PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIGKMY 337 (526)
Q Consensus 261 ~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~---~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l~ele~G~~y 337 (526)
.++.+.+| .+++ ++||+||+....-..+.. .+. ......+ ..-+++++.+. .++..|+.+
T Consensus 330 ~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~~-~vG~p~~-~~~~~i~d~~~-------------~~~~~g~~G 392 (537)
T PRK13382 330 IAFMDQFG-DVIY-NNYNATEAGMIATATPADLRAAPD-TAGRPAE-GTEIRILDQDF-------------REVPTGEVG 392 (537)
T ss_pred HHHHHHcC-CcEE-ecccccccCcceecChhHhccCCC-CccccCc-CcEEEEECCCC-------------CCCCCCCee
Confidence 77777785 7788 999999974322111100 000 0111222 34567776542 245689999
Q ss_pred EEEEccCC---Ce----------ecceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 338 EVVVTTYR---GF----------YRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 338 elVvTt~~---GL----------~RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
||+|++.. |. -.|+|||+++... .-.+.|+||.++ +.|+++...+|+.++.+.
T Consensus 393 El~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~ 461 (537)
T PRK13382 393 TIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE----NGRLFVVGRDDEMIVSGGENVYPIEVEKTLATH 461 (537)
T ss_pred EEEEEcCCcccCccccchhhccCCCEeeCceEEEeC----CCcEEEeccccceeEECCEEECHHHHHHHHHhC
Confidence 99998742 11 2689999998873 346889999998 889999999999988753
No 41
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.11 E-value=1.6e-08 Score=109.42 Aligned_cols=127 Identities=15% Similarity=0.131 Sum_probs=80.4
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCcee-eeecCCCCC---CCCcceecCCCceEEEeeeCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQP---PQTTRFVMLPTAAYFEFLPFDM 315 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~ 315 (526)
+.++ .++.||. ....+.+++. ++++. +.||+||+.. ......... ...... ..++ .-++.++++.
T Consensus 264 ~~lr---~~~~gG~~~~~~~~~~~~~~--g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-p~~~-~~~~i~d~~~ 335 (496)
T PRK06839 264 QSVR---WFYNGGAPCPEELMREFIDR--GFLFG-QGFGMTETSPTVFMLSEEDARRKVGSIGK-PVLF-CDYELIDENK 335 (496)
T ss_pred cccc---eEEECCCCCCHHHHHHHHHh--CCeeE-eeccCCCCCcceEecccccccccCCCCcc-cCCC-ceEEEECCCc
Confidence 4566 4445543 3445666654 58998 9999999742 221111100 000111 1222 3456666543
Q ss_pred CCccccCCceeccccccCCceEEEEEccCC---Cee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 316 EKNEAVGEETVDFSGVEIGKMYEVVVTTYR---GFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 316 ~~~~~~~~~~l~l~ele~G~~yelVvTt~~---GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
.++..|+.+||+|++.. |.| .|+|||+++... .-.+.|+||.++
T Consensus 336 -------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i~ 398 (496)
T PRK06839 336 -------------NKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDE----DGFVYIVGRKKEMII 398 (496)
T ss_pred -------------CCCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcC----CCcEEEeccccceEE
Confidence 23678999999998753 222 289999999863 357889999998
Q ss_pred cceeecCHHHHHHHHHHH
Q 009765 377 SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~ 394 (526)
+.|+|+.+.+|+.++.+.
T Consensus 399 ~~G~~v~p~~iE~~l~~~ 416 (496)
T PRK06839 399 SGGENIYPLEVEQVINKL 416 (496)
T ss_pred ECCEEECHHHHHHHHHhC
Confidence 679999999999988753
No 42
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.10 E-value=1.7e-08 Score=110.72 Aligned_cols=131 Identities=13% Similarity=0.151 Sum_probs=83.1
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCC-CCCCCcceecCCCceEEEeeeCCCCC
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA-QPPQTTRFVMLPTAAYFEFLPFDMEK 317 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~-~~~~~~~~~l~~~~~f~EFip~~~~~ 317 (526)
+++++ ++++||. ....+++.+.++ ++++ ..||.||+.......+. ...........++ .-+..+++++
T Consensus 304 ~~~l~---~~~~gG~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g-~~~~i~d~~~-- 375 (546)
T PRK08314 304 LSSLR---YIGGGGAAMPEAVAERLKELTG-LDYV-EGYGLTETMAQTHSNPPDRPKLQCLGIPTFG-VDARVIDPET-- 375 (546)
T ss_pred chhhh---eeeeccccCCHHHHHHHHHHcC-CcEE-ecccccccccceecCCCcCCCCCccCcccCC-eEEEEEeCCC--
Confidence 35666 4455553 344467777774 8998 99999998432211111 0000011112233 2344555432
Q ss_pred ccccCCceeccccccCCceEEEEEccC---CCee-----------------cceeCCEEEEeeecCCCCEEEEeeeCCC-
Q 009765 318 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-----------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 376 (526)
Q Consensus 318 ~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-----------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 376 (526)
+ .++..|+.+||+|... .|.| -|+|||++++.. .-.+.++||.++
T Consensus 376 -----~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~d~ 441 (546)
T PRK08314 376 -----L-----EELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE----EGYFFITDRLKRM 441 (546)
T ss_pred -----C-----cCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----CCcEEEEecchhh
Confidence 2 3456899999999763 2222 489999998863 457899999998
Q ss_pred --cceeecCHHHHHHHHHHH
Q 009765 377 --SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 --i~gEk~~e~~v~~av~~~ 394 (526)
+.|+++...+|+.++.+.
T Consensus 442 i~~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 442 INASGFKVWPAEVENLLYKH 461 (546)
T ss_pred EEeCCEEECHHHHHHHHHhC
Confidence 889999999999998754
No 43
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.09 E-value=1.3e-08 Score=111.72 Aligned_cols=127 Identities=11% Similarity=0.098 Sum_probs=81.5
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCc-eeeeecCCCCC----CCCcceecCCCceEEEeeeCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASEC-YVGINLDIAQP----PQTTRFVMLPTAAYFEFLPFD 314 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg-~i~i~~~~~~~----~~~~~~~l~~~~~f~EFip~~ 314 (526)
|+++ ++++||. .....++.+.+ +++++ +.||+||+ .++... +... ...... ..++ .-++.++.+
T Consensus 310 ~~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~-~~~~~~~~~~~~G~-~~~g-~~v~i~~~~ 381 (538)
T TIGR03208 310 PSLF---TFLCAGAPIPGILVERAWELL-GALIV-SAWGMTENGAVTVTE-PDDALEKASTTDGR-PLPG-VEVKVIDAN 381 (538)
T ss_pred Ccce---EEEEcCCCCCHHHHHHHHHHc-CCeEE-eeeccCcCCCccccC-cccchhhccCcccc-cCCC-CEEEEECCC
Confidence 5677 3444442 34445666667 48998 99999997 332211 1100 000111 2233 345566533
Q ss_pred CCCccccCCceeccccccCCceEEEEEccC---CCee------------cceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 315 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
+ .++..|+.+||+|++. .|.| .|+|||+++... .-.+.|+||.++
T Consensus 382 --------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~~~i~ 444 (538)
T TIGR03208 382 --------G-----AKLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDA----EGYIRINGRSKDVII 444 (538)
T ss_pred --------C-----CCCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECC----CCcEEEEeccCceEE
Confidence 2 2356899999999875 3433 399999999863 357899999998
Q ss_pred cceeecCHHHHHHHHHHH
Q 009765 377 SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~ 394 (526)
+.|+|+.+.+|+.++.+.
T Consensus 445 ~~G~~v~p~eIE~~l~~~ 462 (538)
T TIGR03208 445 RGGENIPVVEIENLLYQH 462 (538)
T ss_pred ECCEEECHHHHHHHHhcC
Confidence 789999999999998753
No 44
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.09 E-value=3.8e-08 Score=106.55 Aligned_cols=125 Identities=16% Similarity=0.066 Sum_probs=84.2
Q ss_pred EEecCch--hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCC---CCCcceecCCCceEEEeeeCCCCCccccCCc
Q 009765 250 CVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP---PQTTRFVMLPTAAYFEFLPFDMEKNEAVGEE 324 (526)
Q Consensus 250 ~~~~G~~--~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~ 324 (526)
.+.+|+. .....++++.+++++++ +.||+||+........... ...... ..+ ...++.++.+ +
T Consensus 258 ~~~~G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~d~~--------g- 325 (487)
T PRK07638 258 IISSGAKWEAEAKEKIKNIFPYAKLY-EFYGASELSFVTALVDEESERRPNSVGR-PFH-NVQVRICNEA--------G- 325 (487)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCeEE-EEecCCccCceEEecccccCCCCCCCCc-ccC-CcEEEEECCC--------C-
Confidence 4556642 35557788888889999 8999999843222111110 101111 223 3467777643 2
Q ss_pred eeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHH
Q 009765 325 TVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISER 385 (526)
Q Consensus 325 ~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~ 385 (526)
.++.+|+.+||+|++. .|.| .|+|||++.+. ....+.|+||.++ +.|++++..
T Consensus 326 ----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d----~~g~l~i~GR~~d~i~~~G~~v~~~ 397 (487)
T PRK07638 326 ----EEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYED----EEGFIYIVGREKNMILFGGINIFPE 397 (487)
T ss_pred ----CCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEc----CCCeEEEEecCCCeEEeCCEEECHH
Confidence 2457899999999874 2222 47999999876 3457899999998 789999999
Q ss_pred HHHHHHHHH
Q 009765 386 DLMSAMESF 394 (526)
Q Consensus 386 ~v~~av~~~ 394 (526)
+|++++.+.
T Consensus 398 eiE~~l~~~ 406 (487)
T PRK07638 398 EIESVLHEH 406 (487)
T ss_pred HHHHHHHhC
Confidence 999988753
No 45
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.09 E-value=6.7e-09 Score=113.49 Aligned_cols=155 Identities=17% Similarity=0.085 Sum_probs=93.5
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCC-C--CCCcceecCCCceEEEeeeCCC
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQ-P--PQTTRFVMLPTAAYFEFLPFDM 315 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~-~--~~~~~~~l~~~~~f~EFip~~~ 315 (526)
.|.++ .+++||. ...++++.+.+| ++++ +.||+||+....-..+.. . +. ......++ .-+++++.+.
T Consensus 291 ~~~lr---~i~~gG~~l~~~~~~~~~~~~g-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~-~~G~~~~~-~~~~i~d~~~ 363 (516)
T PRK13383 291 LPQLR---VVMSSGDRLDPTLGQRFMDTYG-DILY-NGYGSTEVGIGALATPADLRDAPE-TVGKPVAG-CPVRILDRNN 363 (516)
T ss_pred CCceE---EEEECCCCCCHHHHHHHHHHcC-chhh-hcccccccccceeccccccccCCC-cccCCCCC-cEEEEECCCC
Confidence 35666 4455543 355577777785 7888 999999984322111110 0 00 01112222 3466666432
Q ss_pred CCccccCCceeccccccCCceEEEEEccCCCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cce
Q 009765 316 EKNEAVGEETVDFSGVEIGKMYEVVVTTYRGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSF 379 (526)
Q Consensus 316 ~~~~~~~~~~l~l~ele~G~~yelVvTt~~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~g 379 (526)
.++.+|+.+||+|++..-.. .|+|||++.... .-.+.|+||.++ +.|
T Consensus 364 -------------~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~----~G~l~i~GR~~~~i~~~G 426 (516)
T PRK13383 364 -------------RPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN----AGRLFIVGREDDMIISGG 426 (516)
T ss_pred -------------CCCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC----CccEEEeccccceEEECC
Confidence 23567899999998753333 356999998863 347889999998 889
Q ss_pred eecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCceEEEEEEee
Q 009765 380 EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIR 429 (526)
Q Consensus 380 Ek~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~ 429 (526)
++++..+|+.++.+. .+ +.+.+++. +..........+|+..
T Consensus 427 ~~v~~~eiE~~l~~~-------~~--v~~~~vv~~~~~~~g~~~~~~v~~~ 468 (516)
T PRK13383 427 ENVYPRAVENALAAH-------PA--VADNAVIGVPDERFGHRLAAFVVLH 468 (516)
T ss_pred EEECHHHHHHHHHhC-------CC--eeEEEEEeccccccCceEEEEEEEC
Confidence 999999999988753 22 34545443 2211123444677765
No 46
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.08 E-value=1.3e-08 Score=112.18 Aligned_cols=119 Identities=17% Similarity=0.195 Sum_probs=78.0
Q ss_pred hhhHHHHHHHhCCCCeeccccccCCce-eeeecC-CCC-----CCCCcceecCCCceEEEeeeCCCCCccccCCceeccc
Q 009765 257 SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLD-IAQ-----PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFS 329 (526)
Q Consensus 257 ~~y~~~l~~~~g~v~v~~~~Y~aSEg~-i~i~~~-~~~-----~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l~ 329 (526)
...++++++.|++++++ +.||+||+. +++... +.. ....... ..++. =.++++++. + .
T Consensus 317 ~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~-~~~~~-~v~i~d~~~-------~-----~ 381 (546)
T PLN02330 317 PELLTAFEAKFPGVQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGF-ILPNL-EVKFIDPDT-------G-----R 381 (546)
T ss_pred HHHHHHHHHHcCCCeEE-ecccccccccceecCCCccccccccccCcccc-ccCCc-EEEEEeCCC-------C-----c
Confidence 45567788888789999 999999973 333211 000 0000111 12222 256666442 2 2
Q ss_pred cccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHH
Q 009765 330 GVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMS 389 (526)
Q Consensus 330 ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~ 389 (526)
.+.+|+.+||+|+.. .|.| -|+|||++++.. .-.+.|.||.++ +.|++++..+|+.
T Consensus 382 ~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----dG~l~~~GR~~d~i~~~G~~v~~~~iE~ 457 (546)
T PLN02330 382 SLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDD----DGDIFIVDRIKELIKYKGFQVAPAELEA 457 (546)
T ss_pred cCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeC----CCcEEEEechHHhhhcCCEEECHHHHHH
Confidence 356899999999753 2222 289999998873 246889999998 8899999999999
Q ss_pred HHHHH
Q 009765 390 AMESF 394 (526)
Q Consensus 390 av~~~ 394 (526)
++.+.
T Consensus 458 ~l~~~ 462 (546)
T PLN02330 458 ILLTH 462 (546)
T ss_pred HHHhC
Confidence 88753
No 47
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.08 E-value=3e-08 Score=108.81 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=84.0
Q ss_pred cCCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCC-------CCCCCCcceecCCCceEEEe
Q 009765 241 LWPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDI-------AQPPQTTRFVMLPTAAYFEF 310 (526)
Q Consensus 241 lWP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~-------~~~~~~~~~~l~~~~~f~EF 310 (526)
-++.++ .+.+||. ...++.+++.++ ++++ .+||.||+...+...+ ..+......+-.....-.+.
T Consensus 293 ~~~~lr---~i~~~G~~~~~~~~~~~~~~~~-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i 367 (534)
T PRK05852 293 KPAALR---FIRSCSAPLTAETAQALQTEFA-APVV-CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRI 367 (534)
T ss_pred cCCCee---EEEECCCCCCHHHHHHHHHHhC-CChh-hccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEE
Confidence 346777 4444442 355577788884 8999 8999999732211110 00000011111123445677
Q ss_pred eeCCCCCccccCCceeccccccCCceEEEEEccCC---Cee-------------cceeCCEEEEeeecCCCCEEEEeeeC
Q 009765 311 LPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTYR---GFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRA 374 (526)
Q Consensus 311 ip~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~~---GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~ 374 (526)
++.+. .++.+|+.+||+|++.. |.| .|+|||+++... .-.+.|+||.
T Consensus 368 ~d~~g-------------~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~----dG~l~~~gR~ 430 (534)
T PRK05852 368 VGSDG-------------LPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSA----AGDLSIRGRI 430 (534)
T ss_pred ECCCC-------------CCCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeC----CCcEEEEecc
Confidence 76442 24568999999998752 332 389999999863 3478999999
Q ss_pred CC---cceeecCHHHHHHHHHH
Q 009765 375 PK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 375 ~~---i~gEk~~e~~v~~av~~ 393 (526)
++ +.|+++...+|+.++.+
T Consensus 431 ~d~i~~~G~~v~~~~iE~~l~~ 452 (534)
T PRK05852 431 KELINRGGEKISPERVEGVLAS 452 (534)
T ss_pred hhhEEECCEEECHHHHHHHHHh
Confidence 98 67999999999998875
No 48
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.07 E-value=1.4e-08 Score=112.22 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=83.1
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCcee-eeec--CCCCCCCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINL--DIAQPPQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~--~~~~~~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
+.++ .+++||. .....++++.+ +++++ +.||+||+.. +... .....+. ......++. -.+.+++++
T Consensus 323 ~~lr---~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~-~~G~~~~~~-~~~i~~~~~- 394 (563)
T PRK06710 323 SSIR---ACISGSAPLPVEVQEKFETVT-GGKLV-EGYGLTESSPVTHSNFLWEKRVPG-SIGVPWPDT-EAMIMSLET- 394 (563)
T ss_pred hhhh---heeeCCCcCCHHHHHHHHHhh-CCCEe-cccccccCccccccCcccccccCC-ccCCCCCCC-eEEEEECCC-
Confidence 4666 3444442 34456677767 48898 8999999743 2110 0000111 112233443 356666443
Q ss_pred CccccCCceeccccccCCceEEEEEccC---CCeec-------------ceeCCEEEEeeecCCCCEEEEeeeCCC---c
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---S 377 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~R-------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~---i 377 (526)
+ ..+..|+.+||+|++. .|.|. |+|||++.... ...+.|+||.++ +
T Consensus 395 ------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR~dd~i~~ 459 (563)
T PRK06710 395 ------G-----EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDRKKDMIVA 459 (563)
T ss_pred ------C-----ccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeeccccEEEE
Confidence 2 2356899999999874 23332 99999998763 457899999998 8
Q ss_pred ceeecCHHHHHHHHHHH
Q 009765 378 SFEIISERDLMSAMESF 394 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~~ 394 (526)
.|+|+.+.+|++++.+.
T Consensus 460 ~G~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 460 SGFNVYPREVEEVLYEH 476 (563)
T ss_pred CCEEECHHHHHHHHHhC
Confidence 89999999999999764
No 49
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.07 E-value=2.3e-08 Score=110.35 Aligned_cols=124 Identities=15% Similarity=0.164 Sum_probs=79.9
Q ss_pred EEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCC---CCCcceecCCCceEEEeeeCCCCCccccCC
Q 009765 250 CVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP---PQTTRFVMLPTAAYFEFLPFDMEKNEAVGE 323 (526)
Q Consensus 250 ~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~~~~~~~~~ 323 (526)
.+.+|+. ...++++++.+ +++++ ..||+||+...+...+... +..... .. .+.-+++++.+ +
T Consensus 331 ~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-p~-~g~~v~i~d~~--------~ 398 (557)
T PRK07059 331 VANGGGMAVQRPVAERWLEMT-GCPIT-EGYGLSETSPVATCNPVDATEFSGTIGL-PL-PSTEVSIRDDD--------G 398 (557)
T ss_pred EEEeccccCCHHHHHHHHHHh-CCCee-eccccccccchhhcCCCCCCCcCCcccC-cc-CCcEEEEECCC--------C
Confidence 4555553 34456667777 49999 9999999843321111110 111111 22 23446666643 2
Q ss_pred ceeccccccCCceEEEEEccCC---Cee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecC
Q 009765 324 ETVDFSGVEIGKMYEVVVTTYR---GFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIIS 383 (526)
Q Consensus 324 ~~l~l~ele~G~~yelVvTt~~---GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~ 383 (526)
. .+..|+.+||+|++.. |.| -|+|||+++... .-.+.|+||.++ +.|++++
T Consensus 399 ~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~~~i~~~G~~i~ 469 (557)
T PRK07059 399 N-----DLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIVDRKKDMILVSGFNVY 469 (557)
T ss_pred C-----CCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEecccccceEECCEEEc
Confidence 2 3568899999998732 111 289999998763 357899999998 8899999
Q ss_pred HHHHHHHHHHH
Q 009765 384 ERDLMSAMESF 394 (526)
Q Consensus 384 e~~v~~av~~~ 394 (526)
+.+|++++.+.
T Consensus 470 p~~iE~~l~~~ 480 (557)
T PRK07059 470 PNEIEEVVASH 480 (557)
T ss_pred HHHHHHHHHhC
Confidence 99999988753
No 50
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.06 E-value=2.9e-08 Score=118.46 Aligned_cols=130 Identities=15% Similarity=0.167 Sum_probs=85.5
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCce--eeeecCCC----------CCCCCcceecCCCce
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECY--VGINLDIA----------QPPQTTRFVMLPTAA 306 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~--i~i~~~~~----------~~~~~~~~~l~~~~~ 306 (526)
+++++ .+.+||. ...++++++.+| ++++ +.||+||+. +..+.... +.+. ......|+ .
T Consensus 897 ~~~lr---~~~~gg~~~~~~~~~~~~~~~g-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~-~vG~p~~~-~ 969 (1146)
T PRK08633 897 FASLR---LVVAGAEKLKPEVADAFEEKFG-IRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEG-SVGMPLPG-V 969 (1146)
T ss_pred CCCee---eEEEcCCcCCHHHHHHHHHHhC-CCee-cccccccCcceEEEecCcccccccccccCCCCC-CccccCCC-C
Confidence 45677 4555553 355577777774 8999 999999963 23221100 0010 01112233 3
Q ss_pred EEEeeeCCCCCccccCCceeccccccCCceEEEEEccC---CCe-----------------ecceeCCEEEEeeecCCCC
Q 009765 307 YFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGF-----------------YRYRLGDIVKVVDFYNSSP 366 (526)
Q Consensus 307 f~EFip~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL-----------------~RYr~GDvV~v~g~~~~~P 366 (526)
-++.+++++ + .++.+|+.+||+|+.. .|. -.|+|||+++... ..
T Consensus 970 ~v~i~d~~~-------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~----~g 1033 (1146)
T PRK08633 970 AVRIVDPET-------F-----EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDE----DG 1033 (1146)
T ss_pred EEEEEcCCC-------C-----ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcC----Cc
Confidence 456666543 2 3466899999999764 222 2499999999873 46
Q ss_pred EEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 367 QVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 367 ~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
.+.|+||.++ +.|++++..+|++++.+.
T Consensus 1034 ~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1034 FLTITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred eEEEEecccchhhhCcEEECHHHHHHHHHhc
Confidence 7999999998 789999999999999864
No 51
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.06 E-value=2.3e-08 Score=109.95 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=77.9
Q ss_pred EEecCc-hhhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCCCCcceecCCCceEEEeeeCCCCCccccCCceecc
Q 009765 250 CVTTGS-MSQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDF 328 (526)
Q Consensus 250 ~~~~G~-~~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l 328 (526)
++.+|. ..+-..++.+.+ +++++ +.||+||+.+.+...+..... ......++ +++++.+. +.
T Consensus 271 ~~~gg~~~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~-~~g~~~~~---~~i~~~~~-------~~---- 333 (529)
T PRK07867 271 IVYGNEGAPGDIARFARRF-GCVVV-DGFGSTEGGVAITRTPDTPPG-ALGPLPPG---VAIVDPDT-------GT---- 333 (529)
T ss_pred EEecCCCChHHHHHHHHHh-CCcEE-EeecccccccccccCCCCCCC-CcCCCCCC---EEEEECCC-------CC----
Confidence 344443 344456677777 48999 999999975433211111111 11112233 67776442 11
Q ss_pred ccccCCc------------eEEEEE-cc---CCCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 329 SGVEIGK------------MYEVVV-TT---YRGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 329 ~ele~G~------------~yelVv-Tt---~~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
++..|+ .+||++ .. ..|.| +|+|||++++.. .-.+.|+||.++
T Consensus 334 -~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~~~GR~~d~i~ 408 (529)
T PRK07867 334 -ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA----DGYAYFAGRLGDWMR 408 (529)
T ss_pred -CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC----CCcEEEeccccCeEE
Confidence 123344 799998 33 24443 799999998863 346899999998
Q ss_pred cceeecCHHHHHHHHHHH
Q 009765 377 SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~ 394 (526)
+.|+|+.+.+|+.++.+.
T Consensus 409 ~~G~~v~p~eIE~~l~~~ 426 (529)
T PRK07867 409 VDGENLGTAPIERILLRY 426 (529)
T ss_pred ECCEEeCHHHHHHHHHhC
Confidence 789999999999988753
No 52
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.06 E-value=3.3e-09 Score=128.35 Aligned_cols=242 Identities=13% Similarity=0.067 Sum_probs=129.7
Q ss_pred CCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEeccCCccccCCceeeecc
Q 009765 89 VDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDV-NKILFFIYSDNKTTTKAGFKVMAAS 167 (526)
Q Consensus 89 ~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~gip~g~~s 167 (526)
++.+.+...||||| |+||-+.+|.+.+..+. .++ ... .++.. .+.+. . .+.....+ + .
T Consensus 597 ~~~~a~i~~TSGST-G~PKgV~~~h~~l~~~~----~~~-----~~~--~~~~~~d~~l~-~--~~~~fd~~-~-----~ 655 (1296)
T PRK10252 597 PHHTAYIIFTSGST-GRPKGVMVGQTAIVNRL----LWM-----QNH--YPLTADDVVLQ-K--TPCSFDVS-V-----W 655 (1296)
T ss_pred CCCeEEEEECCCCC-CCCCEEEeccHHHHHHH----HHH-----HHh--cCCCCCCEEEE-e--CCcchhhh-H-----H
Confidence 45567899999999 99999999988764422 222 111 23332 33333 1 11111100 0 0
Q ss_pred chhHHHHHHHHh------hhHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCccccc
Q 009765 168 AFPLQGLIGAFS------FFESKWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKL 241 (526)
Q Consensus 168 ~~~~~~ll~~~~------~l~~~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~l 241 (526)
. .+..++.... ....+.+.+++.|++..++. +.++|+ ....|.+..... ....-
T Consensus 656 ~-~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~-------------~~~~Ps--~l~~l~~~~~~~----~~~~~ 715 (1296)
T PRK10252 656 E-FFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTT-------------THFVPS--MLAAFVASLTPE----GARQS 715 (1296)
T ss_pred H-HHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeE-------------EEeCHH--HHHHHHhhhccc----ccccc
Confidence 0 0000000000 01123445566666666322 333454 444444433221 11112
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCCC----C----cceecCCCceEEEe
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQ----T----TRFVMLPTAAYFEF 310 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~~----~----~~~~l~~~~~f~EF 310 (526)
.++++ .++.||. ....+++++.+ +++++ +.||.||+.+.....+.++.. . ......++. -+..
T Consensus 716 ~~~lr---~i~~gGe~l~~~~~~~~~~~~-~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~-~~~i 789 (1296)
T PRK10252 716 CASLR---QVFCSGEALPADLCREWQQLT-GAPLH-NLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNT-GLRI 789 (1296)
T ss_pred CCCcc---EEEEecCCCCHHHHHHHHhcC-CCEEE-eCCCcchhhheeeeeecccccccccCCCCCCcccccCCC-EEEE
Confidence 25677 3344442 34446666656 58999 999999985433222111100 0 001122232 2234
Q ss_pred eeCCCCCccccCCceeccccccCCceEEEEEccC---CCee--------------------cceeCCEEEEeeecCCCCE
Q 009765 311 LPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------------RYRLGDIVKVVDFYNSSPQ 367 (526)
Q Consensus 311 ip~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------------RYr~GDvV~v~g~~~~~P~ 367 (526)
++.. . ..+..|+.+||+|+.. .|.+ -|+|||+++... .-.
T Consensus 790 ~d~~--------~-----~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----~G~ 852 (1296)
T PRK10252 790 LDAR--------M-----RPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD----DGA 852 (1296)
T ss_pred ECCC--------C-----CCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC----CCc
Confidence 4422 2 2356899999999874 2211 299999999873 457
Q ss_pred EEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 368 VEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 368 i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
+.|+||.|+ ++|+++...+|+.+|.+.
T Consensus 853 l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~ 882 (1296)
T PRK10252 853 VEYLGRSDDQLKIRGQRIELGEIDRAMQAL 882 (1296)
T ss_pred EEEecccCCeEEEeeEEecHHHHHHHHHhC
Confidence 999999998 999999999999999864
No 53
>PLN02246 4-coumarate--CoA ligase
Probab=99.05 E-value=3.5e-08 Score=108.41 Aligned_cols=130 Identities=13% Similarity=0.118 Sum_probs=82.7
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCcee--eeecC--CC---CCCCCcceecCCCceEEEeee
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLD--IA---QPPQTTRFVMLPTAAYFEFLP 312 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i--~i~~~--~~---~~~~~~~~~l~~~~~f~EFip 312 (526)
+.++ .++.||. ....+.+++.+++++++ ..||+||+.. +.+.. .. ..+..... ..++ .-.+.++
T Consensus 298 ~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d 371 (537)
T PLN02246 298 SSIR---MVLSGAAPLGKELEDAFRAKLPNAVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGT-VVRN-AELKIVD 371 (537)
T ss_pred ccee---EEEEecCcCCHHHHHHHHHHcCCCeEe-ccccccccCcccccccccCCCCccccCCcccc-ccCC-cEEEEec
Confidence 4566 4455543 34557788888778888 8999999842 21110 00 00000111 1222 3455565
Q ss_pred CCCCCccccCCceeccccccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCC
Q 009765 313 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAP 375 (526)
Q Consensus 313 ~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~ 375 (526)
+++ . .++..|+.+||+|+.. .|.| .|+|||++++.. .-.+.|+||.+
T Consensus 372 ~~~-------~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~d 435 (537)
T PLN02246 372 PET-------G-----ASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD----DDELFIVDRLK 435 (537)
T ss_pred CCC-------C-----CcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC----CCeEEEEeccc
Confidence 432 1 2456899999999863 2222 478999998873 34789999999
Q ss_pred C---cceeecCHHHHHHHHHHH
Q 009765 376 K---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 376 ~---i~gEk~~e~~v~~av~~~ 394 (526)
+ +.|+++...+|++++.+.
T Consensus 436 d~i~~~G~~i~~~eIE~~l~~~ 457 (537)
T PLN02246 436 ELIKYKGFQVAPAELEALLISH 457 (537)
T ss_pred ceEEECCEEECcHHHHHHHHhC
Confidence 8 889999999999888753
No 54
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.05 E-value=1.4e-08 Score=110.55 Aligned_cols=128 Identities=15% Similarity=0.167 Sum_probs=80.6
Q ss_pred CCceEEEEecCc-h-hhhHHHHHHHhCCCCeeccccccCCce-eeeecCCCCCCCCcc-eecCCCceEEEeeeCCCCCcc
Q 009765 244 NVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQPPQTTR-FVMLPTAAYFEFLPFDMEKNE 319 (526)
Q Consensus 244 ~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~v~~~~Y~aSEg~-i~i~~~~~~~~~~~~-~~l~~~~~f~EFip~~~~~~~ 319 (526)
+++. ++.+|+ . ....+.+++.++ ++++ ..||+||.. ++. .....+...+. ....++ .-++.++.+
T Consensus 279 ~l~~--~~~~G~~l~~~~~~~~~~~~~-~~v~-~~YG~tE~~~~~~-~~~~~~~~~~~~G~~~~g-~~v~i~d~~----- 347 (508)
T TIGR02262 279 RLRL--CTSAGEALPAEVGQRWQARFG-VDIV-DGIGSTEMLHIFL-SNLPGDVRYGTSGKPVPG-YRLRLVGDG----- 347 (508)
T ss_pred ccee--EEEcCCCCCHHHHHHHHHHhC-Cchh-hCccccccCceee-cCCccCCCCCCcCCCCCC-cEEEEECCC-----
Confidence 5562 334443 2 344567777774 8999 999999973 222 11111100001 112222 346777732
Q ss_pred ccCCceeccccccCCceEEEEEccCC---Cee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---ccee
Q 009765 320 AVGEETVDFSGVEIGKMYEVVVTTYR---GFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFE 380 (526)
Q Consensus 320 ~~~~~~l~l~ele~G~~yelVvTt~~---GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gE 380 (526)
+ ..+..|+.+||+|++.. |.| .|+|||+++... .-.+.|+||.++ +.|+
T Consensus 348 ---~-----~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~gR~~d~i~~~G~ 415 (508)
T TIGR02262 348 ---G-----QDVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRND----DGSYTYAGRTDDMLKVSGI 415 (508)
T ss_pred ---C-----CCCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcC----CccEEEeccccceeeeCCE
Confidence 2 23568899999998743 322 479999988752 346899999998 7899
Q ss_pred ecCHHHHHHHHHHH
Q 009765 381 IISERDLMSAMESF 394 (526)
Q Consensus 381 k~~e~~v~~av~~~ 394 (526)
+++..+|++++.+.
T Consensus 416 ~v~~~~ie~~l~~~ 429 (508)
T TIGR02262 416 YVSPFEIESALIQH 429 (508)
T ss_pred EECHHHHHHHHHhC
Confidence 99999999988753
No 55
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.05 E-value=4.5e-08 Score=107.69 Aligned_cols=157 Identities=16% Similarity=0.164 Sum_probs=95.6
Q ss_pred CCCCceEEEEecCc-h-hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCC-----CCcceecCCCceEEEeeeCC
Q 009765 242 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP-----QTTRFVMLPTAAYFEFLPFD 314 (526)
Q Consensus 242 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~-----~~~~~~l~~~~~f~EFip~~ 314 (526)
+++++. .+++|+ . ....+++.+.++..++. ..||+||+....-....++. ..... ..+ ...++.++++
T Consensus 316 ~~~lr~--i~~~G~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~-~~~~~i~d~~ 390 (558)
T PRK12583 316 LSSLRT--GIMAGAPCPIEVMRRVMDEMHMAEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGR-TQP-HLEVKVVDPD 390 (558)
T ss_pred chhheE--EEecCCCCCHHHHHHHHHHcCCccee-ccccccccccceeccCcccccccccCCCCc-cCC-CCeEEEECCC
Confidence 357772 234443 2 34556777778767788 89999998432111111100 00111 222 3456777654
Q ss_pred CCCccccCCceeccccccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC-
Q 009765 315 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 376 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 376 (526)
. .++..|+.+||+|++. .|+| .|+|||+++... .-.+.|.||.++
T Consensus 391 ~-------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----dg~l~i~GR~~~~ 453 (558)
T PRK12583 391 G-------------ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE----QGYVRIVGRSKDM 453 (558)
T ss_pred C-------------CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC----CccEEEEecccce
Confidence 2 3467899999999774 2222 389999999863 347899999998
Q ss_pred --cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCceEEEEEEee
Q 009765 377 --SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIR 429 (526)
Q Consensus 377 --i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~ 429 (526)
+.|++++..+|++++.+. .+ +.+.+++. +........+.+++..
T Consensus 454 i~~~G~~v~~~~IE~~l~~~-------~~--v~~~~v~~~~~~~~~~~~~~~v~~~ 500 (558)
T PRK12583 454 IIRGGENIYPREIEEFLFTH-------PA--VADVQVFGVPDEKYGEEIVAWVRLH 500 (558)
T ss_pred eEECCEEeCHHHHHHHHHhC-------CC--eeEEEEEeeecCCCCcEEEEEEEEC
Confidence 779999999999888752 23 44655443 2212124456777764
No 56
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.05 E-value=1.8e-08 Score=110.20 Aligned_cols=128 Identities=15% Similarity=0.100 Sum_probs=79.9
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCC----CC------CCCcceecCCCceEE
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA----QP------PQTTRFVMLPTAAYF 308 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~----~~------~~~~~~~l~~~~~f~ 308 (526)
.++++ .++.||. .....++.+.+| .+++ +.||+||+...+...+. .+ ...... ..++ .-+
T Consensus 279 ~~~lr---~~~~gG~~l~~~~~~~~~~~~g-~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~g-~~~ 351 (528)
T PRK07470 279 HSSLR---YVIYAGAPMYRADQKRALAKLG-KVLV-QYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGF-ERTG-MEV 351 (528)
T ss_pred CcceE---EEEEcCCCCCHHHHHHHHHHhC-cHHH-HhCCCcccCCceeecchhhccccccccceeeccCc-ccCC-cEE
Confidence 45677 3444443 344456666675 7788 89999996322211100 00 000011 1122 234
Q ss_pred EeeeCCCCCccccCCceeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEee
Q 009765 309 EFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVM 372 (526)
Q Consensus 309 EFip~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~g 372 (526)
+.++.+ + .++..|+.+||+|++. .|.| -|+|||++++.. ...+.+.|
T Consensus 352 ~i~d~~--------~-----~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~G 414 (528)
T PRK07470 352 QIQDDE--------G-----RELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDA----RGFLYITG 414 (528)
T ss_pred EEECCC--------C-----CCCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEcc----CCeEEEeC
Confidence 555533 2 2456899999999874 3333 299999998863 45799999
Q ss_pred eCCC---cceeecCHHHHHHHHHH
Q 009765 373 RAPK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 373 R~~~---i~gEk~~e~~v~~av~~ 393 (526)
|.++ +.|+++...+|+.+|.+
T Consensus 415 R~dd~i~~~G~~v~~~~IE~~l~~ 438 (528)
T PRK07470 415 RASDMYISGGSNVYPREIEEKLLT 438 (528)
T ss_pred CccceEEeCCEEECHHHHHHHHHh
Confidence 9998 88999999999998875
No 57
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.05 E-value=5.4e-08 Score=105.12 Aligned_cols=128 Identities=18% Similarity=0.179 Sum_probs=78.7
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCC--CCCcceecCCCceEEEeeeCCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP--PQTTRFVMLPTAAYFEFLPFDMEK 317 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~--~~~~~~~l~~~~~f~EFip~~~~~ 317 (526)
++++ .+++|+. ....+++++.++ ++++ ..||.||+.+.+......+ +. ......++ .-.++++.+
T Consensus 241 ~~l~---~~~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~-~vG~~~~g-~~~~i~d~~--- 310 (471)
T PRK07787 241 RGAR---LLVSGSAALPVPVFDRLAALTG-HRPV-ERYGMTETLITLSTRADGERRPG-WVGLPLAG-VETRLVDED--- 310 (471)
T ss_pred ccee---EEEECCCCCCHHHHHHHHHHcC-CCee-cccCccccCcceecCCCCcccCC-cccccCCC-cEEEEECCC---
Confidence 4666 4455543 345577777774 8899 9999999854331111110 00 01112222 334555533
Q ss_pred ccccCCceeccccccCCc-eEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeC-CC--
Q 009765 318 NEAVGEETVDFSGVEIGK-MYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRA-PK-- 376 (526)
Q Consensus 318 ~~~~~~~~l~l~ele~G~-~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~-~~-- 376 (526)
+..+. ..|+ .+||+|++. .|.| -|+|||++.+. ..-.+.++||. ++
T Consensus 311 -----~~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~----~dg~l~~~GR~~d~~i 377 (471)
T PRK07787 311 -----GGPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVD----PDGMHRIVGRESTDLI 377 (471)
T ss_pred -----CCCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEc----CCCCEEEeCCCCceeE
Confidence 22221 1343 789999874 2333 29999999886 34578999996 55
Q ss_pred -cceeecCHHHHHHHHHH
Q 009765 377 -SSFEIISERDLMSAMES 393 (526)
Q Consensus 377 -i~gEk~~e~~v~~av~~ 393 (526)
+.|+|++..+|+++|.+
T Consensus 378 ~~~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 378 KSGGYRIGAGEIETALLG 395 (471)
T ss_pred eeCCEEECHHHHHHHHHh
Confidence 88999999999999875
No 58
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.04 E-value=4.1e-08 Score=108.65 Aligned_cols=127 Identities=14% Similarity=0.187 Sum_probs=80.4
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCce-eee-ecCCC-CCCCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECY-VGI-NLDIA-QPPQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~-i~i-~~~~~-~~~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
++++ .+.+||. ....+.+++.+ +++++ ..||+||+. ++. +.... ........ ..++ .=+++++++
T Consensus 333 ~~lr---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~~-~~v~ivd~~-- 403 (562)
T PRK12492 333 SALK---LTNSGGTALVKATAERWEQLT-GCTIV-EGYGLTETSPVASTNPYGELARLGTVGI-PVPG-TALKVIDDD-- 403 (562)
T ss_pred ccee---EEEeccccCCHHHHHHHHHHh-CCcee-eccCccccCceeeecCCcccccCCccce-ecCC-CEEEEECCC--
Confidence 3566 3444442 34456666666 49999 999999973 222 11100 00011111 2233 235666643
Q ss_pred CccccCCceeccccccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
+ ..+..|+.+||+|+.. .|.| .|+|||++++.. .-.+.|+||.++
T Consensus 404 ------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~----~G~l~i~GR~~~~i~ 468 (562)
T PRK12492 404 ------G-----NELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP----DGFVRIVDRKKDLII 468 (562)
T ss_pred ------C-----CCCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC----CCeEEEecccCCeEE
Confidence 2 2355799999999873 2222 399999999873 347899999998
Q ss_pred cceeecCHHHHHHHHHH
Q 009765 377 SSFEIISERDLMSAMES 393 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~ 393 (526)
+.|+++.+.+|+.++.+
T Consensus 469 ~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 469 VSGFNVYPNEIEDVVMA 485 (562)
T ss_pred ECCEEECHHHHHHHHHh
Confidence 88999999999998875
No 59
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.04 E-value=4.7e-08 Score=107.54 Aligned_cols=127 Identities=16% Similarity=0.163 Sum_probs=80.6
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCC----CCcceecCCCceEEEeeeCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP----QTTRFVMLPTAAYFEFLPFDM 315 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~----~~~~~~l~~~~~f~EFip~~~ 315 (526)
++++ ++..||. ....+++.+.+ +++++ +.||.||+.+..... ..+. ......+.++ ..++.++.+
T Consensus 300 ~~l~---~v~~gg~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~-~~~~~~~~~~~G~p~~~~-~~v~i~d~~- 371 (536)
T PRK10946 300 ASLK---LLQVGGARLSETLARRIPAEL-GCQLQ-QVFGMAEGLVNYTRL-DDSDERIFTTQGRPMSPD-DEVWVADAD- 371 (536)
T ss_pred ccee---EEEECCCCCCHHHHHHHHHhc-CCeEE-EeecccccceeeecC-CCccccccccCCcccCCC-ceEEEECCC-
Confidence 5677 5555553 34445666667 48999 999999985543211 1110 0011111122 234444422
Q ss_pred CCccccCCceeccccccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC--
Q 009765 316 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 376 (526)
Q Consensus 316 ~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-- 376 (526)
+ .++..|+.+||+|+.. .|.| -|+|||+++... .-.+.|.||.++
T Consensus 372 -------~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~----~G~l~~~gR~~d~i 435 (536)
T PRK10946 372 -------G-----NPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP----DGYITVVGREKDQI 435 (536)
T ss_pred -------C-----CCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC----CCcEEEecccccee
Confidence 2 2356899999999762 2222 399999998873 346889999998
Q ss_pred -cceeecCHHHHHHHHHH
Q 009765 377 -SSFEIISERDLMSAMES 393 (526)
Q Consensus 377 -i~gEk~~e~~v~~av~~ 393 (526)
+.|++++..+|+.+|.+
T Consensus 436 ~~~G~~v~~~eiE~~l~~ 453 (536)
T PRK10946 436 NRGGEKIAAEEIENLLLR 453 (536)
T ss_pred ecCCEEEcHHHHHHHHHh
Confidence 88999999999998875
No 60
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.04 E-value=2.4e-08 Score=104.94 Aligned_cols=131 Identities=19% Similarity=0.231 Sum_probs=83.0
Q ss_pred CCCCceEEEEecCc-h-hhhHHHHHHHhCCCCeeccccccCCceeee---ecCCCCCCC--Cc-ceecCCCceEEEeeeC
Q 009765 242 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYVGI---NLDIAQPPQ--TT-RFVMLPTAAYFEFLPF 313 (526)
Q Consensus 242 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i---~~~~~~~~~--~~-~~~l~~~~~f~EFip~ 313 (526)
.++++.+ +.+|+ + ...++.+++.+++++++ ..||+||+...+ +........ .. .....++ .....+++
T Consensus 233 ~~~l~~v--~~~g~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~i~~~ 308 (408)
T TIGR01733 233 LASLRLV--ILGGEALTPALVDRWRARGPGARLI-NLYGPTETTVWSTATLVDADDAPRESPVPIGRPLAN-TRLYVLDD 308 (408)
T ss_pred ccCceEE--EEeCccCCHHHHHHHHHhCCCcEEE-ecccCCceEEEEEEEEcCccccCCccccccCcccCC-ceEEEECC
Confidence 3467733 33343 2 45667888888779999 999999984322 111111100 00 0011222 23344443
Q ss_pred CCCCccccCCceeccccccCCceEEEEEccC---CCee----------------------cceeCCEEEEeeecCCCCEE
Q 009765 314 DMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY----------------------RYRLGDIVKVVDFYNSSPQV 368 (526)
Q Consensus 314 ~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~----------------------RYr~GDvV~v~g~~~~~P~i 368 (526)
+ . ..+..|+.+||+|+.. .|.| .|+|||++.+.. .-++
T Consensus 309 ~--------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~----~g~~ 371 (408)
T TIGR01733 309 D--------L-----RPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLP----DGNL 371 (408)
T ss_pred C--------C-----CCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcC----CCCE
Confidence 3 1 2356899999999873 2222 599999998873 3468
Q ss_pred EEeeeCCC---cceeecCHHHHHHHHHH
Q 009765 369 EFVMRAPK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 369 ~f~gR~~~---i~gEk~~e~~v~~av~~ 393 (526)
.|.||.++ +.|+|+++.+|++++..
T Consensus 372 ~~~gR~~~~i~~~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 372 EFLGRIDDQVKIRGYRIELGEIEAALLR 399 (408)
T ss_pred EEeeccCCEEEeCeEEechHHHHHHHhc
Confidence 99999998 78999999999998874
No 61
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.03 E-value=8.5e-08 Score=104.67 Aligned_cols=41 Identities=22% Similarity=0.066 Sum_probs=35.8
Q ss_pred cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHH
Q 009765 349 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 349 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~ 393 (526)
.|+|||++++.. .-.+.|+||.++ +.|++++..+|+++|.+
T Consensus 358 ~~~TGDlg~~d~----dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 358 LRRHGDIMKRTP----GGYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred eeecCCeEEECC----CCcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 389999998863 357899999998 88999999999999985
No 62
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.01 E-value=1.4e-08 Score=111.36 Aligned_cols=129 Identities=16% Similarity=0.152 Sum_probs=81.5
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCC---CCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP---PQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~---~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
++++ +++.||. .....++++.++ ++++ +.||.||+.+....-.... .....+.+ +.....+.++.+
T Consensus 299 ~~lr---~~~~gG~~l~~~~~~~~~~~~g-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~v~i~d~~-- 370 (527)
T TIGR02275 299 SSLK---LLQVGGAKFSEAAARRVPAVFG-CQLQ-QVFGMAEGLVNYTRLDDPAEIIFTTQGRPM-SPDDEVRVVDDH-- 370 (527)
T ss_pred cceE---EEEEcCCCCCHHHHHHHHHHhC-CeEE-eeeccCccCccccCCCCccccccccCCCCC-CCCceEEEECCC--
Confidence 3566 5555553 344566777774 8998 9999999754321100000 00012212 122345555533
Q ss_pred CccccCCceeccccccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
++ .+..|+.+||+|+.. .|.| -|+|||++++.. ..++.|+||.++
T Consensus 371 ------g~-----~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~~~gR~~d~i~ 435 (527)
T TIGR02275 371 ------GN-----PVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTP----EGYIVVVGRAKDQIN 435 (527)
T ss_pred ------CC-----CCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcC----CccEEEEecccceee
Confidence 22 345899999999752 2322 299999999863 457889999998
Q ss_pred cceeecCHHHHHHHHHHH
Q 009765 377 SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~ 394 (526)
+.|+++.+.+|+++|.+.
T Consensus 436 ~~G~~v~~~eiE~~l~~~ 453 (527)
T TIGR02275 436 RGGEKIAAEEIENLLLAH 453 (527)
T ss_pred cCCEEECHHHHHHHHHhC
Confidence 789999999999888753
No 63
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.01 E-value=7.6e-08 Score=108.84 Aligned_cols=227 Identities=14% Similarity=0.140 Sum_probs=119.2
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhC-CCCeeccccccCCceeeeec-CCCCCCCCcc-eecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAG-EVPVLGGDYFASECYVGINL-DIAQPPQTTR-FVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g-~v~v~~~~Y~aSEg~i~i~~-~~~~~~~~~~-~~l~~~~~f~EFip~~~~ 316 (526)
+.|+ .+.+||. ....+.+++.++ ++.+. ..||.||....+.. .+..+...+. ....++. -...++.+
T Consensus 384 ~sLr---~i~~gGe~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~-~v~ivd~~-- 456 (652)
T TIGR01217 384 SALQ---CVASTGSPLPPDGFRWVYDEIKADVWLA-SISGGTDICSCFAGANPTLPVHIGEIQAPGLGT-AVQSWDPE-- 456 (652)
T ss_pred hhee---EEEeecCCCCHHHHHHHHHHhCCCceEE-eccCHHHHhccccCCCCCCCCcCCccCCCcCCC-ceEEECCC--
Confidence 4566 5555553 233455666664 36666 88999995322211 1111100011 1111221 12333322
Q ss_pred CccccCCceeccccccCCceEEEEEccC-----CCee------c------------ceeCCEEEEeeecCCCCEEEEeee
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFY------R------------YRLGDIVKVVDFYNSSPQVEFVMR 373 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~-----~GL~------R------------Yr~GDvV~v~g~~~~~P~i~f~gR 373 (526)
+. ++ +|+.+||+|+.. .|+| + |++||++++.. .-.+.|+||
T Consensus 457 ------g~-----~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~----dG~l~i~GR 520 (652)
T TIGR01217 457 ------GK-----PV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP----RGGIVIHGR 520 (652)
T ss_pred ------CC-----CC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC----CCcEEEEec
Confidence 22 23 489999999863 2333 1 78999999873 357899999
Q ss_pred CCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHH
Q 009765 374 APK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSL 449 (526)
Q Consensus 374 ~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~l 449 (526)
.|+ +.|+++...+|+.+|.+. .+ +.+-+|+. +.......-+.||.+..+ ...+....+++.+.+
T Consensus 521 ~dd~I~~~G~ri~p~EIE~~l~~~-------p~--V~eaavvg~~~~~~ge~~~afVv~~~~---~~~~~~~~~~l~~~~ 588 (652)
T TIGR01217 521 SDSTLNPQGVRMGSAEIYNAVERL-------DE--VRESLCIGQEQPDGGYRVVLFVHLAPG---ATLDDALLDRIKRTI 588 (652)
T ss_pred ccCeEecCCEEcCHHHHHHHHHhC-------CC--cceEEEEeeecCCCCEEEEEEEEECCC---CCCCHHHHHHHHHHH
Confidence 998 889999999999998864 22 33534332 211112344578877543 112222222333333
Q ss_pred HHHhChhHHhhhhcCCCCCcEEEEeCC---CcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhc
Q 009765 450 EDAFGSIYKVQRDRGEISPLSVSIVKP---GTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEG 513 (526)
Q Consensus 450 d~~Ln~~Y~~~R~~~~l~p~~v~~v~~---g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 513 (526)
.+.| ...-.|-.|.+|+. ..=.+.++..+.+=.....++.+.-+.|++.++.+.+
T Consensus 589 ~~~l---------~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~~~~~~~~~~~~~~l~~~~~ 646 (652)
T TIGR01217 589 RAGL---------SPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGTPVDNPGAIDNPELLDLYEE 646 (652)
T ss_pred HhhC---------CCCcCCCEEEECCCCCCCCCccChHHHHHHHHcCCCCCCcccccCHHHHHHHHH
Confidence 3333 11235667777641 1111222222221112234667788899999888754
No 64
>PRK08315 AMP-binding domain protein; Validated
Probab=99.00 E-value=5.8e-08 Score=106.91 Aligned_cols=130 Identities=16% Similarity=0.101 Sum_probs=82.5
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeee-ecCCCCC----CCCcceecCCCceEEEeeeCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGI-NLDIAQP----PQTTRFVMLPTAAYFEFLPFD 314 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i-~~~~~~~----~~~~~~~l~~~~~f~EFip~~ 314 (526)
|+++ +++.||. ...++.+.+.++..+++ +.||.||+.... ......+ .. ......++ .-++.++++
T Consensus 315 ~~lr---~~~~~G~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~-~vG~p~~~-~~v~i~d~~ 388 (559)
T PRK08315 315 SSLR---TGIMAGSPCPIEVMKRVIDKMHMSEVT-IAYGMTETSPVSTQTRTDDPLEKRVT-TVGRALPH-LEVKIVDPE 388 (559)
T ss_pred hhhh---eeEecCCCCCHHHHHHHHHHcCCccee-EEEcccccccceeecCcccchhhccC-CCCccCCC-cEEEEEcCc
Confidence 5677 4344432 34456777778656688 999999984322 1110000 00 01112233 456667654
Q ss_pred CCCccccCCceeccccccCCceEEEEEccCC---Ce--------------ecceeCCEEEEeeecCCCCEEEEeeeCCC-
Q 009765 315 MEKNEAVGEETVDFSGVEIGKMYEVVVTTYR---GF--------------YRYRLGDIVKVVDFYNSSPQVEFVMRAPK- 376 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~G~~yelVvTt~~---GL--------------~RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 376 (526)
+ + ..+..|+.+||+|...+ |. -.|+|||+++... .-.+.|+||.++
T Consensus 389 ~-------~-----~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~d~~ 452 (559)
T PRK08315 389 T-------G-----ETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNIVGRIKDM 452 (559)
T ss_pred c-------C-----CcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEEEeeccce
Confidence 2 2 23458999999997642 22 2599999998762 347899999998
Q ss_pred --cceeecCHHHHHHHHHHH
Q 009765 377 --SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 --i~gEk~~e~~v~~av~~~ 394 (526)
+.|+++...+|+.++.+.
T Consensus 453 i~~~G~~v~~~eIE~~l~~~ 472 (559)
T PRK08315 453 IIRGGENIYPREIEEFLYTH 472 (559)
T ss_pred EEECCEEEcHHHHHHHHHhC
Confidence 889999999999988753
No 65
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.00 E-value=4.4e-08 Score=108.11 Aligned_cols=130 Identities=13% Similarity=0.148 Sum_probs=81.5
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCC-CCCc-ceecCCCceEEEeeeCCCC
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP-PQTT-RFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~-~~~~-~~~l~~~~~f~EFip~~~~ 316 (526)
+++++ .+.+||. ....+++++.+ +++++ ..||+||+...+...+... ...+ .....+ ..-+..++.+
T Consensus 328 l~~lr---~v~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~-~~~v~i~d~~-- 399 (560)
T PRK08751 328 FSSLK---MTLGGGMAVQRSVAERWKQVT-GLTLV-EAYGLTETSPAACINPLTLKEYNGSIGLPIP-STDACIKDDA-- 399 (560)
T ss_pred hhhhe---eeeeCCCCCCHHHHHHHHHHh-CCeEE-EeeccccCCCceecccccccccCCCcCccCC-CceEEEECCC--
Confidence 35666 4455542 34446677767 48888 8999999844332111100 0001 111222 2334455432
Q ss_pred CccccCCceeccccccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
+ .++..|+.+||+|++. .|.| -|+|||++.+.. .-.+.++||.++
T Consensus 400 ------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~GR~~d~i~ 464 (560)
T PRK08751 400 ------G-----TVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIVDRKKDMIL 464 (560)
T ss_pred ------C-----CCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEEeechhhee
Confidence 2 2356788999999874 2222 189999999863 457899999998
Q ss_pred cceeecCHHHHHHHHHHH
Q 009765 377 SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~ 394 (526)
+.|+++...+|+.++.+.
T Consensus 465 ~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 465 VSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred ECCEEEcHHHHHHHHHhC
Confidence 779999999999998754
No 66
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=98.99 E-value=1.3e-07 Score=102.76 Aligned_cols=119 Identities=17% Similarity=0.121 Sum_probs=75.9
Q ss_pred hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCC--CCcceecCCCceEEEeeeCCCCCccccCCceeccccccCC
Q 009765 257 SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP--QTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEIG 334 (526)
Q Consensus 257 ~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~--~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l~ele~G 334 (526)
....+.+++.+++++++ ..||.||+.......+.... ........++ ..+..++.+ +. ++..|
T Consensus 288 ~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~-~~~~i~~~~--------~~-----~~~~~ 352 (515)
T TIGR03098 288 RATLSRLRSFLPNARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPN-AEVLVLRED--------GS-----ECAPG 352 (515)
T ss_pred HHHHHHHHHHCCCCeEe-eeeccccccceEecccccccCCCCCcceecCC-CEEEEECCC--------CC-----CCCCC
Confidence 45557788888778999 99999998432222111100 0011112222 345555533 22 34568
Q ss_pred ceEEEEEccC---CCee-------------------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecC
Q 009765 335 KMYEVVVTTY---RGFY-------------------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIIS 383 (526)
Q Consensus 335 ~~yelVvTt~---~GL~-------------------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~ 383 (526)
+.+||++.+. .|.| .|+|||++.+.. .-.+.|.||.++ +.|++++
T Consensus 353 ~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~~d~i~~~G~~v~ 428 (515)
T TIGR03098 353 EEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE----EGFLYFVGRRDEMIKTSGYRVS 428 (515)
T ss_pred CceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC----CceEEEEeccccceecCCEEeC
Confidence 8899998663 2222 378999998752 236889999998 7799999
Q ss_pred HHHHHHHHHHH
Q 009765 384 ERDLMSAMESF 394 (526)
Q Consensus 384 e~~v~~av~~~ 394 (526)
..+|++++.+.
T Consensus 429 ~~eiE~~l~~~ 439 (515)
T TIGR03098 429 PTEVEEVAYAT 439 (515)
T ss_pred HHHHHHHHhcC
Confidence 99999888753
No 67
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=98.98 E-value=5.1e-09 Score=115.92 Aligned_cols=58 Identities=10% Similarity=0.185 Sum_probs=46.8
Q ss_pred CCceEEEEEccCC---Cee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHH
Q 009765 333 IGKMYEVVVTTYR---GFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAME 392 (526)
Q Consensus 333 ~G~~yelVvTt~~---GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~ 392 (526)
+|+.+||+|.... |.| -|+|||++++. ..-.+.|+||.++ +.|+++++.+|++++.
T Consensus 382 ~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~ 457 (563)
T PLN02860 382 SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWID----KAGNLWLIGRSNDRIKTGGENVYPEEVEAVLS 457 (563)
T ss_pred CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEc----CCCCEEEeecccceeEECCEEccHHHHHHHHH
Confidence 6889999997742 322 37999999986 3457899999998 7899999999999887
Q ss_pred HH
Q 009765 393 SF 394 (526)
Q Consensus 393 ~~ 394 (526)
+.
T Consensus 458 ~~ 459 (563)
T PLN02860 458 QH 459 (563)
T ss_pred hC
Confidence 53
No 68
>PRK05857 acyl-CoA synthetase; Validated
Probab=98.95 E-value=8.9e-08 Score=105.48 Aligned_cols=170 Identities=14% Similarity=0.020 Sum_probs=96.9
Q ss_pred HHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccCCCCceEEEEecCchh---hhH
Q 009765 184 KWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLWPNVRYIKCVTTGSMS---QYC 260 (526)
Q Consensus 184 ~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lWP~L~~i~~~~~G~~~---~y~ 260 (526)
++..+++.|++..++. +.+.|+ .+..|....... ..-+|+++ .+.+||+. ...
T Consensus 248 ~~~~~~~~i~~~~it~-------------~~~~P~--~~~~l~~~~~~~------~~~~~~lr---~~~~gG~~~~~~~~ 303 (540)
T PRK05857 248 NTTSLLEILTTNAVAT-------------TCLVPT--LLSKLVSELKSA------NATVPSLR---LVGYGGSRAIAADV 303 (540)
T ss_pred ChhHHHHHHHhcCcce-------------EEeChH--HHHHHHhccccC------CCcCccce---EEEEcCccCCchhH
Confidence 4556677777766332 333444 555555443321 11245677 34444432 222
Q ss_pred HHHHHHhCCCCeeccccccCCcee-eeecCCCC------CCCCcceecCCCceEEEeeeCCCCCccccCCceeccccccC
Q 009765 261 SKIKYYAGEVPVLGGDYFASECYV-GINLDIAQ------PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEI 333 (526)
Q Consensus 261 ~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~~~~~------~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l~ele~ 333 (526)
..+ +.+ +++++ +.||+||+.+ .+...... .+. ......++. =..+++.+. ...+....+..
T Consensus 304 ~~~-~~~-g~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~-~~G~~~~g~-~v~i~d~~~-------~~~~~~~~~~~ 371 (540)
T PRK05857 304 RFI-EAT-GVRTA-QVYGLSETGCTALCLPTDDGSIVKIEAG-AVGRPYPGV-DVYLAATDG-------IGPTAPGAGPS 371 (540)
T ss_pred HHH-HHh-CCeee-cccCCCcCCceeeecccccccccccccC-CcCcccCCc-EEEEECccc-------cCccccccCCC
Confidence 222 345 58999 9999999732 22211000 000 111223332 233444332 11222234567
Q ss_pred CceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHH
Q 009765 334 GKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 334 G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~ 393 (526)
|+.+||+|+.. .|.| -|+|||+++.. ..-.+.|+||.++ +.|++++..+|+.++..
T Consensus 372 ~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d----~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 446 (540)
T PRK05857 372 ASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERR----EDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEG 446 (540)
T ss_pred CCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEc----CCceEEEeccccccEecCCEEECHHHHHHHHHh
Confidence 88999999884 2333 38999999875 3457999999998 88999999999988875
No 69
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=98.95 E-value=4.4e-07 Score=99.38 Aligned_cols=184 Identities=17% Similarity=0.117 Sum_probs=113.2
Q ss_pred cCCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCC---CCCCcceecCCCceEEEeeeCC
Q 009765 241 LWPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQ---PPQTTRFVMLPTAAYFEFLPFD 314 (526)
Q Consensus 241 lWP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~---~~~~~~~~l~~~~~f~EFip~~ 314 (526)
..+.|+ .+.+.|. .+-...+.+.+| +++. ++||.||....+ +.+.. ++ +.....|. .-.+.++.+
T Consensus 288 dlssLr---~~~SaGEPLnpe~~~w~~~~~g-~~i~-d~~gqTEtg~~~-~~~~~~~~~g--~~g~p~pG-~~~~vvdd~ 358 (528)
T COG0365 288 DLSSLR---VLGSAGEPLNPEAFEWFYSALG-VWIL-DIYGQTETGMGF-IAGRPPVKNG--SSGLPLPG-YAVRRVDDE 358 (528)
T ss_pred cchhhe---eeeccCCCCCHHHHHHHHHHhC-CCEe-ccccccccCccc-cCCCCCcCCC--CCCCCCCC-ceeEEECCC
Confidence 334566 5566554 344466777776 9999 999999986211 11211 22 22333344 456888765
Q ss_pred CCCccccCCceeccccccCCceEEEEEccC-----CCeec-------------ceeCCEEEEeeecCCCCEEEEeeeCCC
Q 009765 315 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK 376 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~G~~yelVvTt~-----~GL~R-------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~ 376 (526)
. .++.+|+ ++|||... -|+|+ |.|||..... .--.|.|+||.|+
T Consensus 359 g-------------~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~D----edGy~~i~GR~DD 420 (528)
T COG0365 359 G-------------NPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERD----EDGYFWLHGRSDD 420 (528)
T ss_pred C-------------CcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEc----cCCCEEEEeeccc
Confidence 2 2456788 99999864 34665 9999999887 3468999999999
Q ss_pred ---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEee-cCCCCCc-eEEEEEEeecCccccCCCHHHHHHHHHHHHH
Q 009765 377 ---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYT-NLESSPK-KLMIFVEIREGCTKLRDSVAILRRCCSSLED 451 (526)
Q Consensus 377 ---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~-~~~~~~~-~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~ 451 (526)
+.|-++...+|++||.+... +.|-+|+. +... .+ --..||=+.++ ..+. ++.++|.+
T Consensus 421 vI~vsG~Rig~~EvE~~l~~hP~---------VaEaAvVg~pd~~-kg~~v~afVvL~~g-----~~~~---~L~~ei~~ 482 (528)
T COG0365 421 VIKVSGKRIGPLEIESVLLAHPA---------VAEAAVVGVPDPG-KGQIVLAFVVLAAG-----VEPN---ELAEEIRR 482 (528)
T ss_pred eEeccCeeccHHHHHHHHHhCcc---------eeeeEEEeccCCC-CCcEEEEEEEecCC-----CChH---HHHHHHHH
Confidence 88999999999999986522 44544432 1111 22 12356656654 2222 34455555
Q ss_pred HhChhHHhhhhcCCC-CCcEEEEeC
Q 009765 452 AFGSIYKVQRDRGEI-SPLSVSIVK 475 (526)
Q Consensus 452 ~Ln~~Y~~~R~~~~l-~p~~v~~v~ 475 (526)
.+ ++..+.+ .|.+|.+|+
T Consensus 483 ~v------r~~~~~~~~p~~i~fv~ 501 (528)
T COG0365 483 HV------ARNIGPHAIPRKIRFVD 501 (528)
T ss_pred HH------HhccCcccCCceEEEec
Confidence 44 1123333 777888875
No 70
>PRK06188 acyl-CoA synthetase; Validated
Probab=98.95 E-value=4.3e-08 Score=107.13 Aligned_cols=128 Identities=17% Similarity=0.128 Sum_probs=79.3
Q ss_pred CCCceEEEEecCc--hh-hhHHHHHHHhCCCCeeccccccCCceeeeecCCCCC-----CCC--cceecCCCceEEEeee
Q 009765 243 PNVRYIKCVTTGS--MS-QYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP-----PQT--TRFVMLPTAAYFEFLP 312 (526)
Q Consensus 243 P~L~~i~~~~~G~--~~-~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~-----~~~--~~~~l~~~~~f~EFip 312 (526)
++++ ++..|| +. .....+.+.++ .++. ..||+||+..++....... ... ......++ .-++.++
T Consensus 281 ~~lr---~~~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g-~~v~i~~ 354 (524)
T PRK06188 281 SSLE---TVYYGASPMSPVRLAEAIERFG-PIFA-QYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPG-LRVALLD 354 (524)
T ss_pred ccee---EEEEcCCCCCHHHHHHHHHHhC-chhh-heeCccccCCceeecCchhccccccccCCccccccCC-cEEEEEc
Confidence 5666 334443 33 33455556675 6677 8999999843332111000 000 00112222 3356665
Q ss_pred CCCCCccccCCceeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC
Q 009765 313 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK 376 (526)
Q Consensus 313 ~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~ 376 (526)
++ + .++..|+.+||+|++. .|.| .|+|||+++... ...+.|.||.++
T Consensus 355 ~~--------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~~ 417 (524)
T PRK06188 355 ED--------G-----REVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYIVDRKKD 417 (524)
T ss_pred CC--------C-----CCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEEEecccc
Confidence 43 1 2456899999999974 2222 499999998863 357889999998
Q ss_pred ---cceeecCHHHHHHHHHH
Q 009765 377 ---SSFEIISERDLMSAMES 393 (526)
Q Consensus 377 ---i~gEk~~e~~v~~av~~ 393 (526)
+.|+++.+.+|+.++.+
T Consensus 418 ~i~~~G~~i~~~~IE~~l~~ 437 (524)
T PRK06188 418 MIVTGGFNVFPREVEDVLAE 437 (524)
T ss_pred ceecCCEEECHHHHHHHHHh
Confidence 88999999999998865
No 71
>PRK13390 acyl-CoA synthetase; Provisional
Probab=98.94 E-value=3.7e-08 Score=107.04 Aligned_cols=126 Identities=15% Similarity=0.090 Sum_probs=78.8
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCce-eeeecCCCC--CCCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQ--PPQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~-i~i~~~~~~--~~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
++++ .+++||. ....+.+++.++ .+++ ..||.||+. +.....+.. ....... ..++ . .+.++.+
T Consensus 270 ~~l~---~v~~~g~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~g-~-~~i~d~~-- 339 (501)
T PRK13390 270 SSLR---AVIHAAAPCPVDVKHAMIDWLG-PIVY-EYYSSTEAHGMTFIDSPDWLAHPGSVGR-SVLG-D-LHICDDD-- 339 (501)
T ss_pred hhhh---eEEEcCCCCCHHHHHHHHHhcC-Ccee-eeecccccCceEEecchhhccCCCCcCC-cccc-e-EEEECCC--
Confidence 3566 4455543 344466667674 7888 899999983 222111110 0000111 1222 2 4555432
Q ss_pred CccccCCceeccccccCCceEEEEEccCCCeec-------------------ceeCCEEEEeeecCCCCEEEEeeeCCC-
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTYRGFYR-------------------YRLGDIVKVVDFYNSSPQVEFVMRAPK- 376 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~~GL~R-------------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~- 376 (526)
++ .+..|+.+||+|.+.+-..+ |+|||++++.. .-.+.|+||.++
T Consensus 340 ------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~~gR~~~~ 404 (501)
T PRK13390 340 ------GN-----ELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYLADRKSFM 404 (501)
T ss_pred ------CC-----CCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEEeeccccc
Confidence 22 35689999999977532222 48999999863 357899999998
Q ss_pred --cceeecCHHHHHHHHHH
Q 009765 377 --SSFEIISERDLMSAMES 393 (526)
Q Consensus 377 --i~gEk~~e~~v~~av~~ 393 (526)
+.|+++.+.+|++++.+
T Consensus 405 i~~~G~~v~p~eIE~~l~~ 423 (501)
T PRK13390 405 IISGGVNIYPQETENALTM 423 (501)
T ss_pred eeECCeeeCHHHHHHHHHh
Confidence 88999999999999864
No 72
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.94 E-value=1.4e-07 Score=103.71 Aligned_cols=126 Identities=14% Similarity=0.125 Sum_probs=78.2
Q ss_pred cccCCceEEEEEccCC---Cee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHH
Q 009765 330 GVEIGKMYEVVVTTYR---GFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSA 390 (526)
Q Consensus 330 ele~G~~yelVvTt~~---GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~a 390 (526)
.+..|+.+||+++... |.| .|+|||+++... .-.+.|+||.++ +.|++++..+|+.+
T Consensus 380 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 380 VLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHH
Confidence 3568899999997632 222 499999999863 347899999998 77999999999998
Q ss_pred HHHHHHHhccccCceEEEEEEe-e--cCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHHhhhhcCCCC
Q 009765 391 MESFQMMLRNVMAVEIVEFAGY-T--NLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYKVQRDRGEIS 467 (526)
Q Consensus 391 v~~~~~~l~~~~g~~l~~f~~~-~--~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~~~l~ 467 (526)
|.+. . + +.+.+++ . +.....-...+++|...+ .+...+.++...+.+.+ +......
T Consensus 456 l~~~-~------~--v~~~~vv~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~l~~~~~~~l-------~~~~~~~ 514 (545)
T PRK07768 456 AARV-E------G--VRPGNAVAVRLDAGHSREGFAVAVESNAF-----EDPAEVRRIRHQVAHEV-------VAEVGVR 514 (545)
T ss_pred HHhC-c------c--cccceEEEEEecCCCCceEEEEEEEeccc-----ccHHHHHHHHHHHHHHH-------HHHhCCC
Confidence 8764 2 2 2222221 1 111112245677776432 22233334444444444 2222356
Q ss_pred CcEEEEeCCCcHH
Q 009765 468 PLSVSIVKPGTFD 480 (526)
Q Consensus 468 p~~v~~v~~g~f~ 480 (526)
|-.|.+++.+.|+
T Consensus 515 p~~v~~v~~~~lP 527 (545)
T PRK07768 515 PRNVVVLGPGSIP 527 (545)
T ss_pred ccEEEEeCCCcCC
Confidence 7788899877665
No 73
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=1.5e-07 Score=104.00 Aligned_cols=125 Identities=20% Similarity=0.193 Sum_probs=81.4
Q ss_pred EEecCch---hhhHHHHHHHhCCCCeeccccccCCcee-eeecCCCC---CCCCcceecCCCceEEEeeeCCCCCccccC
Q 009765 250 CVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQ---PPQTTRFVMLPTAAYFEFLPFDMEKNEAVG 322 (526)
Q Consensus 250 ~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~~~~~---~~~~~~~~l~~~~~f~EFip~~~~~~~~~~ 322 (526)
++++|++ ....+++++.|+..+++ .+||.||+.. .....+.. ..... ....|+ .-...++.+.
T Consensus 295 ~~~~gg~~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~-G~~~pg-~~v~Ivd~~~------- 364 (534)
T COG0318 295 LVLSGGAPLPPELLERFEERFGPIAIL-EGYGLTETSPVVTINPPDDLLAKPGSV-GRPLPG-VEVRIVDPDG------- 364 (534)
T ss_pred EEEecCCcCCHHHHHHHHHHhCCCceE-EeecccccCceeecCCCchhhhcCCcc-cccCCC-cEEEEEeCCC-------
Confidence 6677764 46668888888767788 9999999943 32221111 01111 122233 3445555442
Q ss_pred CceeccccccCCceEEEEEcc---CCCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeec
Q 009765 323 EETVDFSGVEIGKMYEVVVTT---YRGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEII 382 (526)
Q Consensus 323 ~~~l~l~ele~G~~yelVvTt---~~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~ 382 (526)
.+ +.+|+.+||+|-. ..|.| -|+|||+..+.. ...+.|+||.++ ..||++
T Consensus 365 ~~------~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~----~G~l~i~gR~kd~I~~gG~ni 434 (534)
T COG0318 365 GE------VLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDE----DGYLYIVGRLKDLIISGGENI 434 (534)
T ss_pred Cc------cCCCCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcC----CccEEEEeccceEEEeCCeEE
Confidence 11 2238889999953 23433 289999997663 357999999998 678999
Q ss_pred CHHHHHHHHHHH
Q 009765 383 SERDLMSAMESF 394 (526)
Q Consensus 383 ~e~~v~~av~~~ 394 (526)
++.+|+.++.+.
T Consensus 435 ~p~eiE~~l~~~ 446 (534)
T COG0318 435 YPEEIEAVLAEH 446 (534)
T ss_pred CHHHHHHHHHhC
Confidence 999999998875
No 74
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=98.92 E-value=6.4e-08 Score=110.30 Aligned_cols=130 Identities=17% Similarity=0.161 Sum_probs=76.7
Q ss_pred CCceEEEEecCch--hhhH-HHHHHHhCCCCeeccccccCCceee--eecCCCCCCCCcceecCCCceEEEeeeCCCCCc
Q 009765 244 NVRYIKCVTTGSM--SQYC-SKIKYYAGEVPVLGGDYFASECYVG--INLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKN 318 (526)
Q Consensus 244 ~L~~i~~~~~G~~--~~y~-~~l~~~~g~v~v~~~~Y~aSEg~i~--i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~ 318 (526)
+++ .+++||+ .+.. +.++..+ +++++ .+||.||+..+ ++.......+. .....|+ .-+..+++++.
T Consensus 421 ~lr---~i~~GGapl~~~~~~~~~~~~-g~~v~-~~YG~TEt~~~~~~~~~~~~~~gs-vG~p~p~-~evkivd~~~~-- 491 (696)
T PLN02387 421 RIR---FMLSGGAPLSGDTQRFINICL-GAPIG-QGYGLTETCAGATFSEWDDTSVGR-VGPPLPC-CYVKLVSWEEG-- 491 (696)
T ss_pred cEE---EEEEcCCCCCHHHHHHHHHHc-CCCee-EeechhhcccceeecCcccCCCCc-cCCCCCc-eEEEEeecccc--
Confidence 555 5566654 2322 3344446 59999 99999997432 22111111111 1112223 34666764321
Q ss_pred cccCCceeccccccCCceEEEEEccC---CCee------------------cceeCCEEEEeeecCCCCEEEEeeeCCC-
Q 009765 319 EAVGEETVDFSGVEIGKMYEVVVTTY---RGFY------------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK- 376 (526)
Q Consensus 319 ~~~~~~~l~l~ele~G~~yelVvTt~---~GL~------------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 376 (526)
+..+. -.++..+||+|... .|.| -|+|||++++.. .-.+.|+||.++
T Consensus 492 ----~~~~~---~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~----dG~l~i~gR~kd~ 560 (696)
T PLN02387 492 ----GYLIS---DKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHP----DGCLEIIDRKKDI 560 (696)
T ss_pred ----CcccC---CCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECC----CCcEEEEEcccce
Confidence 11111 12344689998652 3433 489999999873 457999999999
Q ss_pred --cc-eeecCHHHHHHHHHH
Q 009765 377 --SS-FEIISERDLMSAMES 393 (526)
Q Consensus 377 --i~-gEk~~e~~v~~av~~ 393 (526)
+. ||++++.+|++++.+
T Consensus 561 ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 561 VKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred EECCCCeEEchHHHHHHHhc
Confidence 44 899999999998875
No 75
>PRK07798 acyl-CoA synthetase; Validated
Probab=98.92 E-value=1.5e-07 Score=102.57 Aligned_cols=130 Identities=14% Similarity=0.045 Sum_probs=80.1
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCc-eeeeecCCCCCCCCcceecCCCceEEEeeeCCCCCc
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASEC-YVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKN 318 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg-~i~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~ 318 (526)
++++ .+.+||. ....+++++.+++++++ ..||+||. .++......++...+.....+. .-.+.++.+
T Consensus 296 ~~l~---~i~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~-~~~~i~~~~---- 366 (533)
T PRK07798 296 SSLF---AIASGGALFSPSVKEALLELLPNVVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTIG-PRTVVLDED---- 366 (533)
T ss_pred CceE---EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccccccCCCCCCccCCCCccCCC-ceEEEECCC----
Confidence 3555 5555543 34556777778779999 99999996 3332211111111121112222 335555543
Q ss_pred cccCCceeccccccCCce--EEEEEccC-------------------CCeecceeCCEEEEeeecCCCCEEEEeeeCCC-
Q 009765 319 EAVGEETVDFSGVEIGKM--YEVVVTTY-------------------RGFYRYRLGDIVKVVDFYNSSPQVEFVMRAPK- 376 (526)
Q Consensus 319 ~~~~~~~l~l~ele~G~~--yelVvTt~-------------------~GL~RYr~GDvV~v~g~~~~~P~i~f~gR~~~- 376 (526)
+. .+.+|+. ++++.+.. .|-.-|+|||++++.. .-.+.|+||.++
T Consensus 367 ----~~-----~~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~~~~ 433 (533)
T PRK07798 367 ----GN-----PVEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTITLLGRGSVC 433 (533)
T ss_pred ----CC-----CCCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEEEEccccce
Confidence 22 2445665 77777652 1222578999998873 357899999998
Q ss_pred --cceeecCHHHHHHHHHHH
Q 009765 377 --SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 --i~gEk~~e~~v~~av~~~ 394 (526)
+.|++++..+|+.++.+.
T Consensus 434 i~~~G~~v~~~eIE~~l~~~ 453 (533)
T PRK07798 434 INTGGEKVFPEEVEEALKAH 453 (533)
T ss_pred EecCCEEeCHHHHHHHHHhC
Confidence 789999999999888753
No 76
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=98.91 E-value=1.8e-07 Score=102.96 Aligned_cols=155 Identities=12% Similarity=0.080 Sum_probs=89.9
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCce-eeeecCCCCCCCC-cceecCCCceEEEeeeCCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECY-VGINLDIAQPPQT-TRFVMLPTAAYFEFLPFDMEK 317 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~-i~i~~~~~~~~~~-~~~~l~~~~~f~EFip~~~~~ 317 (526)
|+++ .+++||. ....+.+.+ + +++++ +.||+||+. ++......+.... +..-.+.....++.++.+
T Consensus 302 ~~lr---~i~~gG~~~~~~~~~~~~~-~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~--- 372 (547)
T PRK06087 302 SALR---FFLCGGTTIPKKVARECQQ-R-GIKLL-SVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEA--- 372 (547)
T ss_pred CCeE---EEEEcCCCCCHHHHHHHHH-c-CCcEE-EEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCC---
Confidence 4666 3444443 233344444 3 59999 999999973 3321111111000 011112233456666633
Q ss_pred ccccCCceeccccccCCceEEEEEccCC---Cee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c
Q 009765 318 NEAVGEETVDFSGVEIGKMYEVVVTTYR---GFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 377 (526)
Q Consensus 318 ~~~~~~~~l~l~ele~G~~yelVvTt~~---GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i 377 (526)
+ .++..|+.+||++.+.. |.| -|+|||+++... ...+.|+||.++ +
T Consensus 373 -----~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~ 438 (547)
T PRK06087 373 -----R-----KTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDE----AGYIKITGRKKDIIVR 438 (547)
T ss_pred -----C-----CCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECC----CCCEEEEecchhhhhc
Confidence 2 24568899999985531 111 389999999863 456889999998 7
Q ss_pred ceeecCHHHHHHHHHHHHHHhccccCceEEEEEEeec-CCCCCceEEEEEEee
Q 009765 378 SFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTN-LESSPKKLMIFVEIR 429 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~-~~~~~~~y~l~vE~~ 429 (526)
.|++++..+|++++.+. .+ +.+.+++.. .........+++...
T Consensus 439 ~G~~v~p~~iE~~l~~~-------~~--v~~~~v~~~~~~~~g~~~~~~v~~~ 482 (547)
T PRK06087 439 GGENISSREVEDILLQH-------PK--IHDACVVAMPDERLGERSCAYVVLK 482 (547)
T ss_pred CCEEECHHHHHHHHHhC-------CC--eeEEEEEecCCCCcCceEEEEEEEC
Confidence 89999999999998753 23 445454432 111123455677664
No 77
>PRK12467 peptide synthase; Provisional
Probab=98.91 E-value=5.2e-08 Score=129.11 Aligned_cols=240 Identities=16% Similarity=0.117 Sum_probs=130.2
Q ss_pred cCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEeccCCccccCCceeeec
Q 009765 88 AVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDV-NKILFFIYSDNKTTTKAGFKVMAA 166 (526)
Q Consensus 88 ~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~gip~g~~ 166 (526)
.++.+.+...||||| |+||-+.+|.+.+..... +. ... .++.. .+.+.+. +.....+ +
T Consensus 3235 ~~~~~a~ii~TSGST-G~PKgV~~~h~~l~~~~~----~~-----~~~--~~~~~~d~~l~~~---~~~fd~~-~----- 3293 (3956)
T PRK12467 3235 MGENLAYVIYTSGST-GKPKGVGVRHGALANHLC----WI-----AEA--YELDANDRVLLFM---SFSFDGA-Q----- 3293 (3956)
T ss_pred CCCceEEEEEccCCC-CCcceeeehhHHHHHHHH----HH-----HHh--cCCCcCCEEEEec---CccHhHH-H-----
Confidence 455677999999999 999999999887654322 21 111 22322 3333321 1111000 0
Q ss_pred cchhHHHHHHHHh--hh-H--HHHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCccccc
Q 009765 167 SAFPLQGLIGAFS--FF-E--SKWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKL 241 (526)
Q Consensus 167 s~~~~~~ll~~~~--~l-~--~~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~l 241 (526)
.. .+..++.... +. . .+-+++++.|++..++. +.++|+ .+..|.+... +.-
T Consensus 3294 ~~-~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~-------------~~~~Ps--~l~~l~~~~~--------~~~ 3349 (3956)
T PRK12467 3294 ER-FLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISI-------------ACFPPA--YLQQFAEDAG--------GAD 3349 (3956)
T ss_pred HH-HHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEE-------------EEcCHH--HHHHHHhccc--------ccC
Confidence 00 0000000000 00 0 12345666677666333 333454 4433332211 122
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCC---C---CcceecCCCceEEEeee
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP---Q---TTRFVMLPTAAYFEFLP 312 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~---~---~~~~~l~~~~~f~EFip 312 (526)
.|.|+ .++.||. ....+++++.++++.++ +.||.||+.+.......... + .......++.. +-.++
T Consensus 3350 ~~~lr---~~~~gGe~~~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~-~~v~d 3424 (3956)
T PRK12467 3350 CASLD---IYVFGGEAVPPAAFEQVKRKLKPRGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRS-IYVLD 3424 (3956)
T ss_pred CCCce---EEEEecCCCCHHHHHHHHHhCCCCEEE-eCcccchhEeeeEEEecccccccCCCCCCCccccCCCE-EEEEC
Confidence 35677 4455543 34446666667779999 99999998654321111000 0 00111222321 11222
Q ss_pred CCCCCccccCCceeccccccCCceEEEEEccC---CCee---------------------cceeCCEEEEeeecCCCCEE
Q 009765 313 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------------RYRLGDIVKVVDFYNSSPQV 368 (526)
Q Consensus 313 ~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~---------------------RYr~GDvV~v~g~~~~~P~i 368 (526)
.+ + ..+.+|+.+||+|... .|.| -|||||++++.. .-.|
T Consensus 3425 ~~--------~-----~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~----dG~l 3487 (3956)
T PRK12467 3425 GQ--------L-----NPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRA----DGVI 3487 (3956)
T ss_pred CC--------C-----CCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecC----CCcE
Confidence 11 2 2456899999999763 2322 199999999873 4589
Q ss_pred EEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 369 EFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 369 ~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
+|+||.|+ |+|.++...+|+.+|.+.
T Consensus 3488 ~~~GR~d~~iki~G~rIe~~EIE~~l~~~ 3516 (3956)
T PRK12467 3488 EYLGRIDHQVKIRGFRIELGEIEARLLQH 3516 (3956)
T ss_pred EEeccccceEeeceEeecHHHHHHHHhhC
Confidence 99999998 999999999999998763
No 78
>PRK12467 peptide synthase; Provisional
Probab=98.91 E-value=1.7e-08 Score=133.49 Aligned_cols=235 Identities=16% Similarity=0.164 Sum_probs=130.5
Q ss_pred cCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEeccCCccccCCceeeec
Q 009765 88 AVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDV-NKILFFIYSDNKTTTKAGFKVMAA 166 (526)
Q Consensus 88 ~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~gip~g~~ 166 (526)
.++.+.+...||||| |+||-+.+|.+.+..+.. ++ ... .++.. .+.+. . . +.....+ +
T Consensus 654 ~~~~~a~iiyTSGST-G~PKgV~~th~~l~~~~~----~~-----~~~--~~~~~~d~~l~-~-~-~~~fd~~-~----- 712 (3956)
T PRK12467 654 DPDNLAYVIYTSGST-GQPKGVAISHGALANYVC----VI-----AER--LQLAADDSMLM-V-S-TFAFDLG-V----- 712 (3956)
T ss_pred CCCCeEEEEECCCCC-CCcCEEEEecHHHHHHHH----HH-----HHh--cCCCCCCEEEE-e-c-CccHhHH-H-----
Confidence 455677999999999 999999999987654322 21 111 23322 33333 2 1 1111000 0
Q ss_pred cchhHHHHHHHHh------hh----HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCC
Q 009765 167 SAFPLQGLIGAFS------FF----ESKWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSG 236 (526)
Q Consensus 167 s~~~~~~ll~~~~------~l----~~~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g 236 (526)
..++..+. +. ..+-+.+++.|++..++. +.++|+ .+..|.+....
T Consensus 713 -----~~~~~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~-------------~~~~Ps--~~~~l~~~~~~----- 767 (3956)
T PRK12467 713 -----TELFGALASGATLHLLPPDCARDAEAFAALMADQGVTV-------------LKIVPS--HLQALLQASRV----- 767 (3956)
T ss_pred -----HHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeE-------------EEcCHH--HHHHHHhhhcc-----
Confidence 00010000 00 113445666677666333 443555 44444333221
Q ss_pred cccccCCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCCC-----CcceecCCCceEE
Q 009765 237 IFSKLWPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQ-----TTRFVMLPTAAYF 308 (526)
Q Consensus 237 ~~~~lWP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~~-----~~~~~l~~~~~f~ 308 (526)
...++++ .++.||. ....+++.+.+++++++ +.||.||+.+.+......... .......++. -+
T Consensus 768 ---~~~~~lr---~i~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~-~~ 839 (3956)
T PRK12467 768 ---ALPRPQR---ALVCGGEALQVDLLARVRALGPGARLI-NHYGPTETTVGVSTYELSDEERDFGNVPIGQPLANL-GL 839 (3956)
T ss_pred ---ccCCccc---EEEEEeecCCHHHHHHHHHhCCCCEEE-eCcCCChhhhheeeEecccccccCCCCcccCCcCCC-EE
Confidence 1123556 3444443 34456666667779999 999999985432111110000 0011122332 23
Q ss_pred EeeeCCCCCccccCCceeccccccCCceEEEEEccC---CCee---------------------cceeCCEEEEeeecCC
Q 009765 309 EFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------------RYRLGDIVKVVDFYNS 364 (526)
Q Consensus 309 EFip~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~---------------------RYr~GDvV~v~g~~~~ 364 (526)
..++.+ . ..+..|+.+||+|+.. .|.| -|||||+++...
T Consensus 840 ~i~d~~--------~-----~~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~---- 902 (3956)
T PRK12467 840 YILDHY--------L-----NPVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRA---- 902 (3956)
T ss_pred EEECCC--------C-----CCCCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcC----
Confidence 344422 1 2456899999999763 2222 399999999863
Q ss_pred CCEEEEeeeCCC---cceeecCHHHHHHHHHH
Q 009765 365 SPQVEFVMRAPK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 365 ~P~i~f~gR~~~---i~gEk~~e~~v~~av~~ 393 (526)
.-.++|+||.|+ ++|+++...+|+.+|.+
T Consensus 903 dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~ 934 (3956)
T PRK12467 903 DGVIEYLGRMDHQVKIRGFRIELGEIEARLLA 934 (3956)
T ss_pred CCcEEEeccccCeEEECCEecCHHHHHHHHHh
Confidence 457999999998 99999999999998875
No 79
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=98.91 E-value=3.4e-08 Score=110.09 Aligned_cols=138 Identities=15% Similarity=0.129 Sum_probs=79.2
Q ss_pred CCCceEEEEecCch-hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCCCCcceecCC----CceEEEeeeCCCCC
Q 009765 243 PNVRYIKCVTTGSM-SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLP----TAAYFEFLPFDMEK 317 (526)
Q Consensus 243 P~L~~i~~~~~G~~-~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~~----~~~f~EFip~~~~~ 317 (526)
++++ ++.+++. ..-.+++.+.+|...++ +.||.||+.+.+..-...+.. ... +.+ ...+..+-+ +..
T Consensus 314 ~~l~---~~~g~~l~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~-~~~- 385 (600)
T PRK08279 314 HRLR---LMIGNGLRPDIWDEFQQRFGIPRIL-EFYAASEGNVGFINVFNFDGT-VGR-VPLWLAHPYAIVKYDV-DTG- 385 (600)
T ss_pred ccee---EEecCCCCHHHHHHHHHHhCcceee-eeecccccceeecccCCCCcc-ccc-ccccccccceeeeecc-CcC-
Confidence 4565 3344443 45567788888755678 999999985543211111111 111 111 222222221 110
Q ss_pred ccccCCceeccccccCCceEEEEEc--c---CCC----------e---------ecceeCCEEEEeeecCCCCEEEEeee
Q 009765 318 NEAVGEETVDFSGVEIGKMYEVVVT--T---YRG----------F---------YRYRLGDIVKVVDFYNSSPQVEFVMR 373 (526)
Q Consensus 318 ~~~~~~~~l~l~ele~G~~yelVvT--t---~~G----------L---------~RYr~GDvV~v~g~~~~~P~i~f~gR 373 (526)
..-. ...-.+.++..|+.+|+++. . ..| + --|+|||++++.. .-.+.|+||
T Consensus 386 ~~i~-~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~----dG~l~~~GR 460 (600)
T PRK08279 386 EPVR-DADGRCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG----FGHAQFVDR 460 (600)
T ss_pred ceee-CCCCccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC----CccEEEecc
Confidence 0000 00112235678999999842 2 111 1 1289999998873 346899999
Q ss_pred CCC---cceeecCHHHHHHHHHH
Q 009765 374 APK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 374 ~~~---i~gEk~~e~~v~~av~~ 393 (526)
.++ +.|+++...+|++++.+
T Consensus 461 ~~d~ik~~G~~i~p~eIE~~l~~ 483 (600)
T PRK08279 461 LGDTFRWKGENVATTEVENALSG 483 (600)
T ss_pred cCCeEEECCcccCHHHHHHHHhc
Confidence 998 88999999999998886
No 80
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=98.90 E-value=1.6e-07 Score=103.13 Aligned_cols=59 Identities=15% Similarity=0.153 Sum_probs=47.9
Q ss_pred ccCCceEEEEEccC---CCee---------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 331 VEIGKMYEVVVTTY---RGFY---------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 331 le~G~~yelVvTt~---~GL~---------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
+..|+.+||+|+.. .|.| -|+|||+++.. . -.+.|+||.++ +.|++++..+|+.+|.+.
T Consensus 367 ~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~----~-G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 367 VAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV----D-GGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred CCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE----C-CEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 56899999999764 2333 48999999763 1 36899999998 889999999999988864
No 81
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.89 E-value=1.8e-07 Score=105.03 Aligned_cols=61 Identities=16% Similarity=0.132 Sum_probs=48.9
Q ss_pred ccccCCceEEEEEccC---CCee-------------------------------cceeCCEEEEeeecCCCCEEEEeeeC
Q 009765 329 SGVEIGKMYEVVVTTY---RGFY-------------------------------RYRLGDIVKVVDFYNSSPQVEFVMRA 374 (526)
Q Consensus 329 ~ele~G~~yelVvTt~---~GL~-------------------------------RYr~GDvV~v~g~~~~~P~i~f~gR~ 374 (526)
.++..|+.+||+|... .|.| -|+|||+++.. .-.+.|+||.
T Consensus 411 ~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~ 485 (631)
T PRK07769 411 SELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRV 485 (631)
T ss_pred cCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEccc
Confidence 3567899999999762 2222 38999999874 2468999999
Q ss_pred CC---cceeecCHHHHHHHHHHH
Q 009765 375 PK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 375 ~~---i~gEk~~e~~v~~av~~~ 394 (526)
++ +.|+++.+.+|+.+|.+.
T Consensus 486 ~d~Ik~~G~~V~p~eIE~~l~~~ 508 (631)
T PRK07769 486 KDLVIIDGRNHYPQDLEYTAQEA 508 (631)
T ss_pred ccEEEECCeeeCHHHHHHHHHhc
Confidence 98 889999999999999864
No 82
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.89 E-value=2.3e-07 Score=100.01 Aligned_cols=60 Identities=22% Similarity=0.163 Sum_probs=48.9
Q ss_pred cccCCceEEEEEccCC---Cee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHH
Q 009765 330 GVEIGKMYEVVVTTYR---GFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSA 390 (526)
Q Consensus 330 ele~G~~yelVvTt~~---GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~a 390 (526)
++..|+.+||+|++.+ |.+ .|+|||+++... ...+.|.||.++ +.|++++..+|+.+
T Consensus 326 ~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~l~~~GR~~~~i~~~G~~v~~~~ie~~ 401 (483)
T PRK03640 326 VVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDE----EGFLYVLDRRSDLIISGGENIYPAEIEEV 401 (483)
T ss_pred cCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcC----CCCEEEeecccCeEEeCCEEECHHHHHHH
Confidence 3668999999998852 221 489999999873 356899999998 88999999999998
Q ss_pred HHH
Q 009765 391 MES 393 (526)
Q Consensus 391 v~~ 393 (526)
+.+
T Consensus 402 i~~ 404 (483)
T PRK03640 402 LLS 404 (483)
T ss_pred HHh
Confidence 875
No 83
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.89 E-value=1.1e-07 Score=105.40 Aligned_cols=41 Identities=24% Similarity=0.166 Sum_probs=35.3
Q ss_pred ceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 350 YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 350 Yr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
|+|||++++.. .-.+.|+||.++ +.|+++...+|+.++.+.
T Consensus 432 ~~TGD~~~~~~----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~ 475 (576)
T PRK05620 432 LRTGDVGSVTR----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMAA 475 (576)
T ss_pred EecCceEEEcC----CceEEEEechhhhhhcCCEEEcHHHHHHHHhcC
Confidence 89999998763 357899999988 889999999999999753
No 84
>PLN02614 long-chain acyl-CoA synthetase
Probab=98.88 E-value=7e-08 Score=109.46 Aligned_cols=131 Identities=15% Similarity=0.129 Sum_probs=80.2
Q ss_pred CCCceEEEEecCch--hhhHHHHHHHhCCCCeeccccccCCcee-e-eecCCCC-CCCCcceecCCCceEEEeeeCCCCC
Q 009765 243 PNVRYIKCVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECYV-G-INLDIAQ-PPQTTRFVMLPTAAYFEFLPFDMEK 317 (526)
Q Consensus 243 P~L~~i~~~~~G~~--~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~-i~~~~~~-~~~~~~~~l~~~~~f~EFip~~~~~ 317 (526)
++|+ .+.+|+. .+...++.+.+++++++ ++||.||+.. + ++..... ..+.... ..|+. =+-++++++.
T Consensus 386 ~~lr---~~~~Gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~pg~-evki~d~~~~- 458 (666)
T PLN02614 386 GNVR---IILSGAAPLASHVESFLRVVACCHVL-QGYGLTESCAGTFVSLPDELDMLGTVGP-PVPNV-DIRLESVPEM- 458 (666)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHhcCCCEE-eeCchHhhhhheeeeccccCCcCCcccC-cCCce-EEEEeeeccc-
Confidence 3566 3345543 34445566667679999 9999999742 2 2111000 0111111 22332 2334543211
Q ss_pred ccccCCceeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cc
Q 009765 318 NEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SS 378 (526)
Q Consensus 318 ~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~ 378 (526)
+. .++.+|+.+||+|... .|.| -|+|||++++.. .-.+.|+||.++ +.
T Consensus 459 ----~~-----~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~gR~kd~ik~~ 525 (666)
T PLN02614 459 ----EY-----DALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQP----NGSMKIIDRKKNIFKLS 525 (666)
T ss_pred ----Cc-----ccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcC----CCCEEEEEcchhceecC
Confidence 01 2356789999999653 4444 489999999873 346999999999 33
Q ss_pred -eeecCHHHHHHHHHH
Q 009765 379 -FEIISERDLMSAMES 393 (526)
Q Consensus 379 -gEk~~e~~v~~av~~ 393 (526)
|+++++.+|++++.+
T Consensus 526 ~G~~V~p~eIE~~l~~ 541 (666)
T PLN02614 526 QGEYVAVENIENIYGE 541 (666)
T ss_pred CCeeecHHHHHHHHhc
Confidence 899999999988875
No 85
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=98.87 E-value=7.7e-08 Score=102.26 Aligned_cols=55 Identities=18% Similarity=0.207 Sum_probs=45.0
Q ss_pred ceEEEEEccCC---Cee---------c----ceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHH
Q 009765 335 KMYEVVVTTYR---GFY---------R----YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 335 ~~yelVvTt~~---GL~---------R----Yr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~ 393 (526)
+.+||+|++.. |.| + |+|||+++... ...+.|.||.++ +.|++++..+|+.++.+
T Consensus 291 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 291 GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISGGENIYPEEIETVLYQ 364 (436)
T ss_pred CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeCCEeeCHHHHHHHHHh
Confidence 66899998742 233 2 99999999874 357899999998 88999999999998875
No 86
>PRK05850 acyl-CoA synthetase; Validated
Probab=98.86 E-value=1.4e-06 Score=96.73 Aligned_cols=127 Identities=16% Similarity=0.214 Sum_probs=76.1
Q ss_pred ccccCCceEEEEEccC---CCee-------------------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c
Q 009765 329 SGVEIGKMYEVVVTTY---RGFY-------------------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 377 (526)
Q Consensus 329 ~ele~G~~yelVvTt~---~GL~-------------------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i 377 (526)
.++..|+.+||.|... .|.| -|+|||++.+. .-.+.|+||.++ +
T Consensus 390 ~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-----~G~l~~~GR~~d~i~~ 464 (578)
T PRK05850 390 IECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-----EGELFIVGRIKDLLIV 464 (578)
T ss_pred cCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-----CCEEEEEcccccEEEE
Confidence 3467899999999764 2322 49999999764 137899999998 8
Q ss_pred ceeecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHH---HHHHHHHHHHHHhC
Q 009765 378 SFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVA---ILRRCCSSLEDAFG 454 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~---~~~~~~~~ld~~Ln 454 (526)
.|++++..+|+.+|.+.. ++...-+ .+.+.. ....+.+|++.... ..+.+ .+..+.+.+...+
T Consensus 465 ~G~~i~p~eIE~~l~~~~-------~~~~~v~-~v~~~~--~~~~~a~v~~~~~~---~~~~~~~~~~~~l~~~v~~~l- 530 (578)
T PRK05850 465 DGRNHYPDDIEATIQEIT-------GGRVAAI-SVPDDG--TEKLVAIIELKKRG---DSDEEAMDRLRTVKREVTSAI- 530 (578)
T ss_pred CCeecCHHHHHHHHHHhc-------CCcEEEE-EecCCC--ceEEEEEEEecccc---CcchhhhhhHHHHHHHHHHHH-
Confidence 899999999999988642 2222211 122332 23445667665321 11111 1233333333333
Q ss_pred hhHHhhhhcCCCCCcEEEEeCCCcHH
Q 009765 455 SIYKVQRDRGEISPLSVSIVKPGTFD 480 (526)
Q Consensus 455 ~~Y~~~R~~~~l~p~~v~~v~~g~f~ 480 (526)
.. ...+.|..+.+|+.++|+
T Consensus 531 ---~~---~~~~~~~~~~~~~~~~iP 550 (578)
T PRK05850 531 ---SK---SHGLSVADLVLVAPGSIP 550 (578)
T ss_pred ---HH---HhCCCceEEEEeCCCCcC
Confidence 21 223567778888876665
No 87
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=98.86 E-value=3.1e-07 Score=100.10 Aligned_cols=144 Identities=17% Similarity=0.070 Sum_probs=85.7
Q ss_pred hhhHHHHHHHhCCCCeeccccccCCceeeee-cCCCC--CCCCcceecCCCceEEEeeeCCCCCccccCCceeccccccC
Q 009765 257 SQYCSKIKYYAGEVPVLGGDYFASECYVGIN-LDIAQ--PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVEI 333 (526)
Q Consensus 257 ~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~-~~~~~--~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l~ele~ 333 (526)
...+..+.+.+ +++++ +.||+||+...+- ..+.. ...... ...+ +.-.+.++.+ + .++..
T Consensus 301 ~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G-~~~~-g~~~~i~d~~--------~-----~~~~~ 363 (517)
T PRK08008 301 DQEKDAFEERF-GVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIG-RPGF-CYEAEIRDDH--------N-----RPLPA 363 (517)
T ss_pred HHHHHHHHHHh-CCeEE-eeccccccccccccCCccccccCCccc-cCCC-CcEEEEECCC--------C-----CCCCC
Confidence 34556677777 48999 9999999843221 00100 000000 1112 2345555532 2 34568
Q ss_pred CceEEEEEccCC------Cee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHH
Q 009765 334 GKMYEVVVTTYR------GFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSA 390 (526)
Q Consensus 334 G~~yelVvTt~~------GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~a 390 (526)
|+.+||+++... |.| -|+|||++.... .-.+.|+||.++ +.|++++..+|+.+
T Consensus 364 g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~i~p~~iE~~ 439 (517)
T PRK08008 364 GEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDRRCNMIKRGGENVSCVELENI 439 (517)
T ss_pred CCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeecccceEEeCCEEECHHHHHHH
Confidence 999999998531 111 289999988763 357899999998 77999999999988
Q ss_pred HHHHHHHhccccCceEEEEEEeecC-CCCCceEEEEEEeec
Q 009765 391 MESFQMMLRNVMAVEIVEFAGYTNL-ESSPKKLMIFVEIRE 430 (526)
Q Consensus 391 v~~~~~~l~~~~g~~l~~f~~~~~~-~~~~~~y~l~vE~~~ 430 (526)
+.+. .+ +.+.+++... ......-..+|.+..
T Consensus 440 l~~~-------~~--v~~~~v~g~~~~~~~~~~~~~v~~~~ 471 (517)
T PRK08008 440 IATH-------PK--IQDIVVVGIKDSIRDEAIKAFVVLNE 471 (517)
T ss_pred HHhC-------Cc--eeeEEEEccCCCCCCceEEEEEEECC
Confidence 8653 22 4455544321 111233446776653
No 88
>PLN03102 acyl-activating enzyme; Provisional
Probab=98.85 E-value=1.6e-07 Score=104.55 Aligned_cols=57 Identities=23% Similarity=0.310 Sum_probs=46.4
Q ss_pred CceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 334 GKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 334 G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
|+.+||+|++. .|.| +|+|||+++.. ....+.|+||.++ +.|++++..+|+.++.+.
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d----~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIH----PDGHVEIKDRSKDIIISGGENISSVEVENVLYKY 465 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEc----CCCeEEEEeccCcEEEECCEEECHHHHHHHHHhC
Confidence 36799999863 3433 69999999986 3457899999998 788999999999999753
No 89
>PRK08308 acyl-CoA synthetase; Validated
Probab=98.85 E-value=9.5e-08 Score=101.53 Aligned_cols=56 Identities=14% Similarity=0.005 Sum_probs=46.6
Q ss_pred CCceEEEEEccCCCeecceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 333 IGKMYEVVVTTYRGFYRYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 333 ~G~~yelVvTt~~GL~RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
.|+.+|+++++..| +|+|||+++... .-.+.|+||.++ +.|+++++.+|++++.+.
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~----dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~ 336 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE----RGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRL 336 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC----CccEEEecccCCeEEECCEEECHHHHHHHHHhC
Confidence 46678999998766 578999998763 347899999998 889999999999988753
No 90
>PRK12316 peptide synthase; Provisional
Probab=98.85 E-value=1.7e-07 Score=126.60 Aligned_cols=241 Identities=15% Similarity=0.120 Sum_probs=130.4
Q ss_pred cCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEeccCCccccCCceeeec
Q 009765 88 AVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDV-NKILFFIYSDNKTTTKAGFKVMAA 166 (526)
Q Consensus 88 ~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~gip~g~~ 166 (526)
.++.+.+...||||| |+||-+.+|.+.+..... +. .. . .++.. .+.+.+. +.....+ +
T Consensus 4692 ~~~~~a~ii~TSGST-G~PKgV~~~h~~l~~~~~----~~----~~-~--~~~~~~d~~l~~~---~~~fd~~-~----- 4750 (5163)
T PRK12316 4692 HPDNLAYVIYTSGST-GRPKGVAVSHGSLVNHLH----AT----GE-R--YELTPDDRVLQFM---SFSFDGS-H----- 4750 (5163)
T ss_pred CCCceEEEEECCCCC-CCCCEeeeccHHHHHHHH----HH----HH-h--cCCCcCCeEEEec---CcchhhH-H-----
Confidence 345567899999999 999999999887644222 21 11 1 22322 3433321 1111100 0
Q ss_pred cchhHHHHHHHHh--hhH--H-HHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCccccc
Q 009765 167 SAFPLQGLIGAFS--FFE--S-KWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKL 241 (526)
Q Consensus 167 s~~~~~~ll~~~~--~l~--~-~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~l 241 (526)
.. .+..+..... +.. . +.+.+++.|++..++. +.++|+ .+..|....... .-
T Consensus 4751 ~~-~~~~L~~G~~lvi~~~~~~~~~~l~~~i~~~~vt~-------------~~~~Ps--~~~~l~~~~~~~-------~~ 4807 (5163)
T PRK12316 4751 EG-LYHPLINGASVVIRDDSLWDPERLYAEIHEHRVTV-------------LVFPPV--YLQQLAEHAERD-------GE 4807 (5163)
T ss_pred HH-HHHHHhCCCEEEEcCcccCCHHHHHHHHHHcCCEE-------------EEcCHH--HHHHHHhhhccc-------cC
Confidence 00 0000000000 000 0 3456667777766333 444554 444444433221 12
Q ss_pred CCCCceEEEEecCchh---hhHHHHHHHhCCCCeeccccccCCceeeeecCCCCC---CCC---cceecCCCceEEEeee
Q 009765 242 WPNVRYIKCVTTGSMS---QYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQP---PQT---TRFVMLPTAAYFEFLP 312 (526)
Q Consensus 242 WP~L~~i~~~~~G~~~---~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~---~~~---~~~~l~~~~~f~EFip 312 (526)
.|.|+ +++.||.. .-.+++.+.+++++++ ++||.||+.+........+ ... ......++. -...++
T Consensus 4808 ~~~lr---~v~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~-~~~i~d 4882 (5163)
T PRK12316 4808 PPSLR---VYCFGGEAVAQASYDLAWRALKPVYLF-NGYGPTETTVTVLLWKARDGDACGAAYMPIGTPLGNR-SGYVLD 4882 (5163)
T ss_pred CCCcc---EEEEecccCCHHHHHHHHHhCCCCEEE-ecccCccceEEEEEEEcccccccCCCCCcccccccCC-EEEEEC
Confidence 35677 45555542 3334555556779999 9999999855321111000 000 001111222 233344
Q ss_pred CCCCCccccCCceeccccccCCceEEEEEccC---CCee---------------------cceeCCEEEEeeecCCCCEE
Q 009765 313 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------------RYRLGDIVKVVDFYNSSPQV 368 (526)
Q Consensus 313 ~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~---------------------RYr~GDvV~v~g~~~~~P~i 368 (526)
.+ . ..+..|+.|||+|+.. .|.| -|+|||+++... .-.+
T Consensus 4883 ~~--------~-----~~~p~g~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~----dG~l 4945 (5163)
T PRK12316 4883 GQ--------L-----NPLPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFGAPGGRLYRTGDLARYRA----DGVI 4945 (5163)
T ss_pred CC--------C-----CcCCCCCCceEEECCcccchhhcCChhhhhhhccCCCCCCCCcceeecCceeEECC----CCcE
Confidence 22 2 2356899999999652 2211 299999999873 4689
Q ss_pred EEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 369 EFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 369 ~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
.|+||.|+ ++|+++...+|+.++.+.
T Consensus 4946 ~~~GR~d~~iki~G~ri~~~eIE~~l~~~ 4974 (5163)
T PRK12316 4946 DYLGRVDHQVKIRGFRIELGEIEARLREH 4974 (5163)
T ss_pred EEeccccceEeeccEeecHHHHHHHHHhC
Confidence 99999998 999999999999988753
No 91
>PRK12316 peptide synthase; Provisional
Probab=98.85 E-value=1.4e-07 Score=127.48 Aligned_cols=241 Identities=18% Similarity=0.101 Sum_probs=129.3
Q ss_pred cCCCceeeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEeccCCccccCCceeeec
Q 009765 88 AVDPLVCFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDV-NKILFFIYSDNKTTTKAGFKVMAA 166 (526)
Q Consensus 88 ~~~~i~~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~gip~g~~ 166 (526)
.++.+.+...||||| |+||-+.+|.+.+..... +. .. . .++.. .+.+.+. +..... ++
T Consensus 2144 ~~~~~a~ii~TSGST-G~PKgV~~~h~~l~~~~~----~~----~~-~--~~~~~~d~~l~~~---~~~fd~-~~----- 2202 (5163)
T PRK12316 2144 AGENLAYVIYTSGST-GLPKGVAVSHGALVAHCQ----AA----GE-R--YELSPADCELQFM---SFSFDG-AH----- 2202 (5163)
T ss_pred CCCCeEEEEeCccCC-CCCCEeEEccHHHHHHHH----HH----HH-h--cCCCCcceEEEec---CchHHH-HH-----
Confidence 456677999999999 999999999887644222 21 11 1 22322 4444422 111100 00
Q ss_pred cchhHHHHHHHHhh-h----HHHHHHHHHHHHcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCccccc
Q 009765 167 SAFPLQGLIGAFSF-F----ESKWEQLCDDLENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKL 241 (526)
Q Consensus 167 s~~~~~~ll~~~~~-l----~~~w~~l~~dI~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~l 241 (526)
.. .+..++....+ + ..+-+.+++.|++..++. +..+|+ .+..|...... ...
T Consensus 2203 ~~-~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~-------------~~~~P~--~~~~l~~~~~~-------~~~ 2259 (5163)
T PRK12316 2203 EQ-WFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTI-------------LDFPPV--YLQQLAEHAER-------DGR 2259 (5163)
T ss_pred HH-HHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeE-------------EEcChH--HHHHHHhhhhc-------ccC
Confidence 00 00000000000 0 012234556666666333 333454 44444443322 112
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecC---CCCCCC---CcceecCCCceEEEeee
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLD---IAQPPQ---TTRFVMLPTAAYFEFLP 312 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~---~~~~~~---~~~~~l~~~~~f~EFip 312 (526)
.|.|+ +++.||. ....+++.+.++++.++ +.||.||+.+..-.. +..+.. .......++. -.-.++
T Consensus 2260 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~-~~~i~d 2334 (5163)
T PRK12316 2260 PPAVR---VYCFGGEAVPAASLRLAWEALRPVYLF-NGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNR-RAYILD 2334 (5163)
T ss_pred Cccee---EEEEecccCCHHHHHHHHHhCCCcEEE-ECccchhheeeeeeeecccccccCCCcCCcccccCCC-EEEEEC
Confidence 24677 5555553 23445555566778899 999999985432111 111100 0011112222 122233
Q ss_pred CCCCCccccCCceeccccccCCceEEEEEccC---CCee---------------------cceeCCEEEEeeecCCCCEE
Q 009765 313 FDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------------RYRLGDIVKVVDFYNSSPQV 368 (526)
Q Consensus 313 ~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~---------------------RYr~GDvV~v~g~~~~~P~i 368 (526)
.+ . ..+..|+.+||+|... .|.| -|||||+++.. ..-.+
T Consensus 2335 ~~--------~-----~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~----~dG~l 2397 (5163)
T PRK12316 2335 AD--------L-----NLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYR----ADGVV 2397 (5163)
T ss_pred CC--------C-----CCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEc----CCCcE
Confidence 22 2 2456899999999652 2211 39999999987 34679
Q ss_pred EEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 369 EFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 369 ~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
.|+||.|+ |+|.++...+|+.+|.+.
T Consensus 2398 ~~~GR~d~~iki~G~rie~~eIE~~l~~~ 2426 (5163)
T PRK12316 2398 EYLGRIDHQVKIRGFRIELGEIEARLQAH 2426 (5163)
T ss_pred EEecCCCCeEEEcCccCChHHHHHHHhhC
Confidence 99999998 999999999999988753
No 92
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.85 E-value=2e-07 Score=102.56 Aligned_cols=131 Identities=15% Similarity=0.134 Sum_probs=77.1
Q ss_pred CCCCceEEEEecCc-h-hhhHHHHHHHhCCCCeeccccccCCcee-ee-ecCCCC----CC-------CCcceecCCCce
Q 009765 242 WPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASECYV-GI-NLDIAQ----PP-------QTTRFVMLPTAA 306 (526)
Q Consensus 242 WP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i-~~~~~~----~~-------~~~~~~l~~~~~ 306 (526)
.++++ .++.+|+ . ...++++++.+ +++++ +.||+||+.. +. +..... ++ ..... ..| +.
T Consensus 292 ~~~l~--~~~~~G~~l~~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-p~p-g~ 365 (539)
T PRK07008 292 FSTLR--RTVIGGSACPPAMIRTFEDEY-GVEVI-HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGR-VIY-GV 365 (539)
T ss_pred cccce--EEEEcCCCCCHHHHHHHHHHh-CCcee-cccccccccccceecccccccccCCchhhhhhcccCCc-ccc-ce
Confidence 35677 3344443 2 45556777777 48999 9999999742 21 100000 00 00001 111 23
Q ss_pred EEEeeeCCCCCccccCCceeccccccCCceEEEEEccC---CCee----------cceeCCEEEEeeecCCCCEEEEeee
Q 009765 307 YFEFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY----------RYRLGDIVKVVDFYNSSPQVEFVMR 373 (526)
Q Consensus 307 f~EFip~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~----------RYr~GDvV~v~g~~~~~P~i~f~gR 373 (526)
-.++++.+ +..+. ...++.+||+++.. .|.+ -|+|||+++... .-.+.|+||
T Consensus 366 ~~~i~d~~--------~~~~~---~~~~~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~----dg~l~~~GR 430 (539)
T PRK07008 366 DMKIVGDD--------GRELP---WDGKAFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA----DGFMQITDR 430 (539)
T ss_pred EEEEECCC--------CCccC---CCCCcceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC----CCcEEEeec
Confidence 34555532 11121 11234689999873 2222 299999999863 347899999
Q ss_pred CCC---cceeecCHHHHHHHHHH
Q 009765 374 APK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 374 ~~~---i~gEk~~e~~v~~av~~ 393 (526)
.++ +.|+|++..+|+.++.+
T Consensus 431 ~~d~i~~~G~~v~p~eIE~~l~~ 453 (539)
T PRK07008 431 SKDVIKSGGEWISSIDIENVAVA 453 (539)
T ss_pred ccCEEEeCCeEEcHHHHHHHHHh
Confidence 998 88999999999988875
No 93
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.84 E-value=1.1e-06 Score=95.62 Aligned_cols=127 Identities=12% Similarity=0.057 Sum_probs=79.9
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCcee-ee-ecCCC-CCCCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GI-NLDIA-QPPQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i-~~~~~-~~~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
.+++ +++.||. ...++.+++.+| .+++ ..||+||+.. .+ +.... .........+ ..-++.++++
T Consensus 262 ~~lr---~i~~~g~~~~~~~~~~~~~~~~-~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d~~-- 331 (502)
T PRK08276 262 SSLR---VAIHAAAPCPVEVKRAMIDWWG-PIIH-EYYASSEGGGVTVITSEDWLAHPGSVGKAV---LGEVRILDED-- 331 (502)
T ss_pred ccce---EEEecCCCCCHHHHHHHHHHhC-cHhh-hhcccccccceeEecCccccccCCCcceec---ccEEEEECCC--
Confidence 4566 5555553 355577777775 7777 8999999743 22 11100 0000011111 2234555432
Q ss_pred CccccCCceeccccccCCceEEEEEccCC---Ce--------------ecceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTYR---GF--------------YRYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~~---GL--------------~RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
+ ..+..|+.+||+++... |. -.|+|||++++.. .-.+.++||.++
T Consensus 332 ------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~~~i~ 396 (502)
T PRK08276 332 ------G-----NELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYLTDRKSDMII 396 (502)
T ss_pred ------C-----CCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEEeccCcceEE
Confidence 1 24567899999999431 11 2578999998873 346899999998
Q ss_pred cceeecCHHHHHHHHHHH
Q 009765 377 SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~ 394 (526)
+.|+++...+|+.++.+.
T Consensus 397 ~~G~~v~~~~iE~~i~~~ 414 (502)
T PRK08276 397 SGGVNIYPQEIENLLVTH 414 (502)
T ss_pred eCCEEeCHHHHHHHHHhC
Confidence 889999999999998753
No 94
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=98.84 E-value=6.1e-08 Score=102.40 Aligned_cols=115 Identities=17% Similarity=0.283 Sum_probs=74.8
Q ss_pred cCCCCceEEEEecCc-h-hhhHHHHHHHhCCCCeeccccccCCc-eeeeec--CCC-CCCCCcceecCCCceEEEeeeCC
Q 009765 241 LWPNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASEC-YVGINL--DIA-QPPQTTRFVMLPTAAYFEFLPFD 314 (526)
Q Consensus 241 lWP~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~v~~~~Y~aSEg-~i~i~~--~~~-~~~~~~~~~l~~~~~f~EFip~~ 314 (526)
-++++|.| +++|+ + ....+++++.++.++++ ..||+||+ .+++.. ... .... ......+ +.-++.++++
T Consensus 275 ~l~~lr~v--~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~-~~G~~~~-~~~~~ivd~~ 349 (417)
T PF00501_consen 275 DLSSLRTV--ISGGEPLPPDLLRRLRKAFGNAPII-NLYGSTETGSIATIRPPEDDIEKPG-SVGKPLP-GVEVKIVDPN 349 (417)
T ss_dssp TGTT-SEE--EEESST-CHHHHHHHHHHHTTSEEE-EEEEEGGGSSEEEEEETTTHHSSTT-SEBEEST-TEEEEEECTT
T ss_pred cccccccc--ccccccCChhhccccccccccccce-ecccccccceeeecccccccccccc-ccccccc-cccccccccc
Confidence 34568844 23443 3 46668888999766888 99999998 444422 111 0111 1223344 5678899876
Q ss_pred CCCccccCCceeccccccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC
Q 009765 315 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK 376 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~ 376 (526)
+ + ..+..|+.+||+|++. .|.| -|+|||++++. ..-.|.++||.++
T Consensus 350 ~-------~-----~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d----~~G~~~~~GR~~~ 412 (417)
T PF00501_consen 350 T-------G-----EPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLD----EDGYLYILGRSDD 412 (417)
T ss_dssp T-------S-----SBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEE----TTSEEEEEEEGSC
T ss_pred c-------c-----ccccccccccccccCCccceeeeccccccccccccccceecceEEEEC----CCCeEEEEEeeCC
Confidence 4 2 2346899999999964 3333 49999999996 3459999999998
No 95
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.83 E-value=2.7e-08 Score=121.44 Aligned_cols=41 Identities=22% Similarity=0.205 Sum_probs=36.1
Q ss_pred cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHH
Q 009765 349 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 349 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~ 393 (526)
-|+|||+++... .-.+.|+||.|+ ++|+++...+|+.+|.+
T Consensus 679 ~y~TGDlg~~~~----dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~ 722 (1389)
T TIGR03443 679 LYRTGDLGRYLP----DGNVECCGRADDQVKIRGFRIELGEIDTHLSQ 722 (1389)
T ss_pred eeecCCceeEcC----CCCEEEecccCCEEEeCcEEecHHHHHHHHHh
Confidence 499999998873 357999999998 99999999999999876
No 96
>PRK05691 peptide synthase; Validated
Probab=98.83 E-value=6.4e-08 Score=129.19 Aligned_cols=130 Identities=16% Similarity=0.180 Sum_probs=78.9
Q ss_pred CCCceEEEEecCch--h-hhHHHHHHHhCCCCeeccccccCCceeeee---cCCCCCCCC--cceecCCCceEEEeeeCC
Q 009765 243 PNVRYIKCVTTGSM--S-QYCSKIKYYAGEVPVLGGDYFASECYVGIN---LDIAQPPQT--TRFVMLPTAAYFEFLPFD 314 (526)
Q Consensus 243 P~L~~i~~~~~G~~--~-~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~---~~~~~~~~~--~~~~l~~~~~f~EFip~~ 314 (526)
|+|+ .++.||. . .-.+++.+.++++.++ +.||.||+.+.+. ......... ......++.. +=.++..
T Consensus 3983 ~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~-~~v~d~~ 4057 (4334)
T PRK05691 3983 DGLR---WMLPTGEAMPPELARQWLQRYPQIGLV-NAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNR-LYLLDEA 4057 (4334)
T ss_pred CCce---EEEecCCcCCHHHHHHHHHhCCCCeEE-eCccCccceeEEEEEEcccccccCCcCCCCCccCCCE-EEEECCC
Confidence 4677 3344443 2 3334555556789999 9999999965332 111110000 0001112211 1112211
Q ss_pred CCCccccCCceeccccccCCceEEEEEccC---CCee---------------------cceeCCEEEEeeecCCCCEEEE
Q 009765 315 MEKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGFY---------------------RYRLGDIVKVVDFYNSSPQVEF 370 (526)
Q Consensus 315 ~~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL~---------------------RYr~GDvV~v~g~~~~~P~i~f 370 (526)
. ..+..|..+||+|... .|.+ -|||||+++... .-.|+|
T Consensus 4058 --------~-----~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~----dG~l~~ 4120 (4334)
T PRK05691 4058 --------L-----ELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS----DGVLEY 4120 (4334)
T ss_pred --------C-----CCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC----CCcEEE
Confidence 1 2356899999999763 2211 299999999873 457999
Q ss_pred eeeCCC---cceeecCHHHHHHHHHHH
Q 009765 371 VMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 371 ~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
+||.|+ |+|.++...+|+.++.+.
T Consensus 4121 ~GR~d~qvki~G~riel~eIE~~l~~~ 4147 (4334)
T PRK05691 4121 VGRIDHQVKIRGYRIELGEIEARLHEQ 4147 (4334)
T ss_pred ecccCCcEEeceEEecHHHHHHHHHhC
Confidence 999998 999999999999988753
No 97
>PLN02736 long-chain acyl-CoA synthetase
Probab=98.82 E-value=6.4e-08 Score=109.28 Aligned_cols=131 Identities=16% Similarity=0.119 Sum_probs=78.3
Q ss_pred CCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCC--CCCCCcceecCCCceEEEeeeCCCCCc
Q 009765 244 NVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA--QPPQTTRFVMLPTAAYFEFLPFDMEKN 318 (526)
Q Consensus 244 ~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~~~ 318 (526)
+++ .+.+||. ....+.+++.+| ++++ .+||.||+...+..... ....... ...|+ .-+.+++.++.
T Consensus 377 ~lr---~~~~gGa~l~~~~~~~~~~~~g-~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG-~p~pg-~~v~i~d~~~~-- 447 (651)
T PLN02736 377 RVR---FMSSGASPLSPDVMEFLRICFG-GRVL-EGYGMTETSCVISGMDEGDNLSGHVG-SPNPA-CEVKLVDVPEM-- 447 (651)
T ss_pred cEE---EEEeCCCCCCHHHHHHHHHHhC-CCeE-EEechHHhchheeccCCCCCCCCccC-CccCc-eEEEEEEcccc--
Confidence 455 4455543 244456666674 8888 99999998433221111 1111111 12233 34566664321
Q ss_pred cccCCceeccccccCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c-
Q 009765 319 EAVGEETVDFSGVEIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S- 377 (526)
Q Consensus 319 ~~~~~~~l~l~ele~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i- 377 (526)
.. ..+.+++..+||.|... .|.| -|+|||++++.. .-.+.|+||.++ +
T Consensus 448 -----~~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~----dG~l~i~GR~kd~ik~~ 516 (651)
T PLN02736 448 -----NY--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP----GGRLKIIDRKKNIFKLA 516 (651)
T ss_pred -----Cc--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC----CCcEEEEEechhheEcC
Confidence 00 01223455689998653 3433 489999999873 347899999998 4
Q ss_pred ceeecCHHHHHHHHHHH
Q 009765 378 SFEIISERDLMSAMESF 394 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~~ 394 (526)
.|+++++.+|+.++.+.
T Consensus 517 ~G~~V~p~eIE~~l~~~ 533 (651)
T PLN02736 517 QGEYIAPEKIENVYAKC 533 (651)
T ss_pred CCcEechHHHHHHHhcC
Confidence 38999999999888753
No 98
>PRK13388 acyl-CoA synthetase; Provisional
Probab=98.81 E-value=1e-06 Score=97.11 Aligned_cols=124 Identities=16% Similarity=0.092 Sum_probs=75.3
Q ss_pred hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCCCCcceecCCCceEEEeeeCCCCCc-----cccCCceeccccc
Q 009765 257 SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKN-----EAVGEETVDFSGV 331 (526)
Q Consensus 257 ~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~-----~~~~~~~l~l~el 331 (526)
....+++.+.+ +++++ +.||+||+...+...+..++..... ..++ .++++.+.... -.+++..+ .
T Consensus 277 ~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~-p~~g---~~i~~~~~~~~~~~~~~d~~g~~~----~ 346 (540)
T PRK13388 277 PRDIAEFSRRF-GCQVE-DGYGSSEGAVIVVREPGTPPGSIGR-GAPG---VAIYNPETLTECAVARFDAHGALL----N 346 (540)
T ss_pred HHHHHHHHHHh-CCcee-cccccccccceeecCCCCCCCCCCC-CCCC---cEEEcCCCCccccceeccCccccc----c
Confidence 34556677777 48999 9999999843322112122211222 2333 35544332100 00111111 1
Q ss_pred cCCceEEEEEc-cC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHH
Q 009765 332 EIGKMYEVVVT-TY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAM 391 (526)
Q Consensus 332 e~G~~yelVvT-t~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av 391 (526)
..|+.+||+++ .. .|.| .|+|||+++... .-.+.|+||.++ +.|++++..+|+.++
T Consensus 347 ~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~----dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l 422 (540)
T PRK13388 347 ADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA----DGWIYFAGRTADWMRVDGENLSAAPIERIL 422 (540)
T ss_pred CCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC----CCcEEEeccCCceEEECCEEeCHHHHHHHH
Confidence 24678999998 32 2333 599999999863 346899999998 789999999999988
Q ss_pred HHH
Q 009765 392 ESF 394 (526)
Q Consensus 392 ~~~ 394 (526)
.+.
T Consensus 423 ~~~ 425 (540)
T PRK13388 423 LRH 425 (540)
T ss_pred HhC
Confidence 753
No 99
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=98.81 E-value=7e-07 Score=102.09 Aligned_cols=42 Identities=24% Similarity=0.225 Sum_probs=35.9
Q ss_pred cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 349 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 349 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
.|+|||++++.. .-.+.|+||.++ +.|+++++.+|++++.+.
T Consensus 592 w~~TGDlg~~d~----dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 592 WYDTGDIVRFDE----QGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred eEecCCEEEEcC----CCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 489999999863 346889999998 889999999999988764
No 100
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=98.80 E-value=4.6e-07 Score=101.59 Aligned_cols=28 Identities=25% Similarity=0.418 Sum_probs=23.6
Q ss_pred CCCceeeecccccCCCcceecccChHHHH
Q 009765 89 VDPLVCFFYSSGTSSMKPKLIPYFDSALS 117 (526)
Q Consensus 89 ~~~i~~f~~TSGTTsG~~K~iP~t~~~~~ 117 (526)
++.+.+...||||| |+||-+..|.+.+.
T Consensus 208 ~~d~a~ilyTSGTT-G~PKgV~~sh~~l~ 235 (614)
T PRK08180 208 PDTIAKFLFTSGST-GLPKAVINTHRMLC 235 (614)
T ss_pred cCceEEEEECCCCC-CCCCEEEeehHHHH
Confidence 45566889999999 99999999988654
No 101
>PLN03052 acetate--CoA ligase; Provisional
Probab=98.80 E-value=1.5e-06 Score=99.65 Aligned_cols=41 Identities=17% Similarity=0.048 Sum_probs=35.5
Q ss_pred ceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 350 YRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 350 Yr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
|+|||++++.. .-.+.|+||.|+ +.|+++...+|+++|...
T Consensus 591 ~~tGDl~~~d~----dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~ 634 (728)
T PLN03052 591 RRHGDIFERTS----GGYYRAHGRADDTMNLGGIKVSSVEIERVCNAA 634 (728)
T ss_pred EecCceEEECC----CCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhc
Confidence 89999999873 346899999998 889999999999988643
No 102
>PRK09192 acyl-CoA synthetase; Validated
Probab=98.80 E-value=2.5e-06 Score=94.79 Aligned_cols=60 Identities=15% Similarity=0.052 Sum_probs=48.4
Q ss_pred cccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHH
Q 009765 330 GVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSA 390 (526)
Q Consensus 330 ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~a 390 (526)
++..|+.+||+|+.. .|.| .|+|||++.+ . .-.+.|+||.++ +.|++++..+|+++
T Consensus 405 ~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 405 PLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-L----DGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-E----CCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 356789999999764 2333 4899999976 3 247999999998 88999999999999
Q ss_pred HHHH
Q 009765 391 MESF 394 (526)
Q Consensus 391 v~~~ 394 (526)
|++.
T Consensus 480 l~~~ 483 (579)
T PRK09192 480 AEQE 483 (579)
T ss_pred HHhc
Confidence 9874
No 103
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=98.79 E-value=8.8e-07 Score=99.27 Aligned_cols=129 Identities=16% Similarity=0.192 Sum_probs=76.9
Q ss_pred ccccCCceEEEEEccC---CCee--------------------------------cceeCCEEEEeeecCCCCEEEEeee
Q 009765 329 SGVEIGKMYEVVVTTY---RGFY--------------------------------RYRLGDIVKVVDFYNSSPQVEFVMR 373 (526)
Q Consensus 329 ~ele~G~~yelVvTt~---~GL~--------------------------------RYr~GDvV~v~g~~~~~P~i~f~gR 373 (526)
.++.+|+.+||+|... .|.| -|+|||++.+. .-.+.|+||
T Consensus 422 ~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~GR 496 (612)
T PRK12476 422 AELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITGR 496 (612)
T ss_pred cCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEec
Confidence 3467899999999763 2332 58999999763 236999999
Q ss_pred CCC---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHH
Q 009765 374 APK---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLE 450 (526)
Q Consensus 374 ~~~---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld 450 (526)
.++ +.|++++..+|+++|.+..+.. ....+.-|. +.+.. ..+-+++++...+ ......+++.+.+.
T Consensus 497 ~~d~I~~~G~~I~p~eIE~~l~~~~p~V---~~~~v~v~~-~~~~~--~~~~~~~v~~~~~-----~~~~~~~~l~~~~~ 565 (612)
T PRK12476 497 IADLIVIDGRNHYPQDIEATVAEASPMV---RRGYVTAFT-VPAED--NERLVIVAERAAG-----TSRADPAPAIDAIR 565 (612)
T ss_pred cCcEEEECCcccCHHHHHHHHHHhcccc---cCCcEEEEE-ecCCC--cceEEEEEEecCC-----cccccHHHHHHHHH
Confidence 999 8899999999999998653422 111121111 22332 2355678887532 11111223344444
Q ss_pred HHhChhHHhhhhcCCCCCcEEEEeCCCcHH
Q 009765 451 DAFGSIYKVQRDRGEISPLSVSIVKPGTFD 480 (526)
Q Consensus 451 ~~Ln~~Y~~~R~~~~l~p~~v~~v~~g~f~ 480 (526)
+.|... ..+.|-.+.+|+.+.|+
T Consensus 566 ~~l~~~-------~~~~p~~v~~v~~~~lP 588 (612)
T PRK12476 566 AAVSRR-------HGLAVADVRLVPAGAIP 588 (612)
T ss_pred HHHHHh-------hCCcceEEEEECCCCcC
Confidence 545221 22445567887765555
No 104
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=98.78 E-value=4.5e-07 Score=99.82 Aligned_cols=55 Identities=20% Similarity=0.200 Sum_probs=43.2
Q ss_pred ceEEEEEccC---CCee-----------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHH
Q 009765 335 KMYEVVVTTY---RGFY-----------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 335 ~~yelVvTt~---~GL~-----------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~ 393 (526)
..+||+|... .|.| .|+|||++++.. .-.+.|+||.++ +.|+|++..+|+.++.+
T Consensus 383 ~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 383 TFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA----YGYMRITDRSKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred ceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC----CccEEEEecCCCeEEECCEEECHHHHHHHHHh
Confidence 5689998642 2333 399999998753 346899999998 88999999999988875
No 105
>PRK05691 peptide synthase; Validated
Probab=98.76 E-value=1.1e-07 Score=127.07 Aligned_cols=131 Identities=13% Similarity=0.115 Sum_probs=83.9
Q ss_pred CCCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCC-CCC-CC-cceecCCCceEEEeeeCCC
Q 009765 242 WPNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA-QPP-QT-TRFVMLPTAAYFEFLPFDM 315 (526)
Q Consensus 242 WP~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~-~~~-~~-~~~~l~~~~~f~EFip~~~ 315 (526)
.|+|+ .++.||. ....+++.+.+++++++ +.||.||+.+.+..... .+. .. ......++ ..+..++.+
T Consensus 1387 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~-~~~~i~d~~- 1460 (4334)
T PRK05691 1387 CTSLR---RLFSGGEALPAELRNRVLQRLPQVQLH-NRYGPTETAINVTHWQCQAEDGERSPIGRPLGN-VLCRVLDAE- 1460 (4334)
T ss_pred CCccc---EEEEeecCCCHHHHHHHHHhCCCcEEE-eCCCcChheeeeeeeecccccCCCCcccceeCC-CEEEEECCC-
Confidence 35777 4455543 34446677778889999 99999998553321110 000 00 01112223 234445432
Q ss_pred CCccccCCceeccccccCCceEEEEEccC---CCe---------------------ecceeCCEEEEeeecCCCCEEEEe
Q 009765 316 EKNEAVGEETVDFSGVEIGKMYEVVVTTY---RGF---------------------YRYRLGDIVKVVDFYNSSPQVEFV 371 (526)
Q Consensus 316 ~~~~~~~~~~l~l~ele~G~~yelVvTt~---~GL---------------------~RYr~GDvV~v~g~~~~~P~i~f~ 371 (526)
. ..+..|+.+||+|... .|. --|||||+++... .-.+.|+
T Consensus 1461 -------~-----~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~----dG~l~~~ 1524 (4334)
T PRK05691 1461 -------L-----NLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA----DGALEYL 1524 (4334)
T ss_pred -------C-----CCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC----CCCEEEe
Confidence 2 3456899999999652 111 1389999999873 4579999
Q ss_pred eeCCC---cceeecCHHHHHHHHHHH
Q 009765 372 MRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 372 gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
||.|+ ++|.++...+|+.+|.+.
T Consensus 1525 GR~d~qiki~G~rie~~eIE~~l~~~ 1550 (4334)
T PRK05691 1525 GRLDQQVKLRGFRVEPEEIQARLLAQ 1550 (4334)
T ss_pred cccCcEEEECCEEcCHHHHHHHHHhC
Confidence 99998 899999999999988753
No 106
>PRK13391 acyl-CoA synthetase; Provisional
Probab=98.75 E-value=2.3e-06 Score=93.42 Aligned_cols=125 Identities=15% Similarity=0.057 Sum_probs=80.0
Q ss_pred CCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCcee-eeecCCC---CCCCCcceecCCCceEEEeeeCCCC
Q 009765 244 NVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIA---QPPQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 244 ~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~~~~---~~~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
+++ .+++|+. ....+.+++.+| .+++ ..||+||+.. ....... .+...|. ..+. ..++++.+
T Consensus 276 ~l~---~~~~gg~~~~~~~~~~~~~~~g-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~--~~~g--~~~i~d~~-- 344 (511)
T PRK13391 276 SLE---VAIHAAAPCPPQVKEQMIDWWG-PIIH-EYYAATEGLGFTACDSEEWLAHPGTVGR--AMFG--DLHILDDD-- 344 (511)
T ss_pred cee---EEEEccCCCCHHHHHHHHHHcC-Ccee-eeeccccccceEEecCccccccCCCcCC--cccc--eEEEECCC--
Confidence 566 4444442 455577778775 7788 9999999843 2211111 1111111 1122 35566533
Q ss_pred CccccCCceeccccccCCceEEEEEccCC--Cee---------------cceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTTYR--GFY---------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt~~--GL~---------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
+ ..+..|+.+||++.... |.| -|+|||+++.. ..-.+.|+||.++
T Consensus 345 ------~-----~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~----~~g~l~~~gR~~~~i~ 409 (511)
T PRK13391 345 ------G-----AELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVD----EDGYLYLTDRAAFMII 409 (511)
T ss_pred ------C-----CCCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEEC----CCccEEEeccCCCEEE
Confidence 2 23468899999997741 122 37799999876 3457899999998
Q ss_pred cceeecCHHHHHHHHHHH
Q 009765 377 SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~ 394 (526)
+.|+++.+.+|+.++.+.
T Consensus 410 ~~G~~v~~~eie~~l~~~ 427 (511)
T PRK13391 410 SGGVNIYPQEAENLLITH 427 (511)
T ss_pred eCCEEECHHHHHHHHHhC
Confidence 889999999999998753
No 107
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.73 E-value=1.3e-06 Score=104.66 Aligned_cols=124 Identities=20% Similarity=0.221 Sum_probs=74.8
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCceeeeecCCC--CCCCCcceecCCCceEEEeeeCCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIA--QPPQTTRFVMLPTAAYFEFLPFDMEK 317 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~~ 317 (526)
++++ .+.+||. ...++.+++.+ +++++ +.||+||+...+...+. ........ ..|+. -....|.+
T Consensus 907 ~~lr---~v~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~~g~-~~~~~~~~--- 976 (1140)
T PRK06814 907 RSLR---YVFAGAEKVKEETRQTWMEKF-GIRIL-EGYGVTETAPVIALNTPMHNKAGTVGR-LLPGI-EYRLEPVP--- 976 (1140)
T ss_pred ccee---EEEEcCCcCCHHHHHHHHHHh-CCcEE-eccccccccceEEecCCCCCCCCcCCc-cCCCC-eEEEeecC---
Confidence 3566 4555553 34456666667 48999 99999998433221111 00000111 11221 11222211
Q ss_pred ccccCCceeccccccCCceEEEEEccCC---Cee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c
Q 009765 318 NEAVGEETVDFSGVEIGKMYEVVVTTYR---GFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S 377 (526)
Q Consensus 318 ~~~~~~~~l~l~ele~G~~yelVvTt~~---GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i 377 (526)
..|+.+||.|.... |.| .|+|||+++... .-.+.|+||.|+ +
T Consensus 977 --------------~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d~i~~ 1038 (1140)
T PRK06814 977 --------------GIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDE----EGFITIKGRAKRFAKI 1038 (1140)
T ss_pred --------------CCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECC----CCeEEEEecccCeeee
Confidence 13566788775531 211 699999999963 467999999998 8
Q ss_pred ceeecCHHHHHHHHHHH
Q 009765 378 SFEIISERDLMSAMESF 394 (526)
Q Consensus 378 ~gEk~~e~~v~~av~~~ 394 (526)
.|++++..+|++++.+.
T Consensus 1039 ~G~~v~~~eIE~~l~~~ 1055 (1140)
T PRK06814 1039 AGEMISLAAVEELAAEL 1055 (1140)
T ss_pred CCEEECHHHHHHHHHhc
Confidence 89999999999988764
No 108
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=98.72 E-value=8e-07 Score=102.04 Aligned_cols=129 Identities=14% Similarity=0.235 Sum_probs=75.5
Q ss_pred CCCceEEEEecCch---hhhHHHHHHHhCCCCeeccccccCCcee--eeecCCCCCCCCcceecCCCceEEEeeeCCCCC
Q 009765 243 PNVRYIKCVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEK 317 (526)
Q Consensus 243 P~L~~i~~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg~i--~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~ 317 (526)
++|+ .+++||+ ....+.++..+ |++++ .+||.||+.. .++.......+.....+.|. .-+..++.++.
T Consensus 461 ~~lr---~~~sGGapl~~~~~~~~~~~~-g~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg-~e~ki~d~~~~- 533 (746)
T PTZ00342 461 PNLE---VILNGGGKLSPKIAEELSVLL-NVNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPN-TKYKVRTWETY- 533 (746)
T ss_pred CCeE---EEEEcCCCCCHHHHHHHHHhc-CCCEE-EeeccCcccceeeeccCCCCCcccccCcCCCc-EEEEEeccccc-
Confidence 5666 4455553 23445566666 49999 9999999732 32211111111111111122 22333432210
Q ss_pred ccccCCceeccccccCCceEEEEEcc---CCCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC-c--
Q 009765 318 NEAVGEETVDFSGVEIGKMYEVVVTT---YRGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-S-- 377 (526)
Q Consensus 318 ~~~~~~~~l~l~ele~G~~yelVvTt---~~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-i-- 377 (526)
. ....+..+||+|.. ..|.| -|+|||++++.. .-.+.|+||.++ |
T Consensus 534 ------~-----~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~----dG~l~i~gR~kdlIkl 598 (746)
T PTZ00342 534 ------K-----ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINK----NGSLTFLDRSKGLVKL 598 (746)
T ss_pred ------c-----cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECC----CCeEEEEccCCCeEEe
Confidence 0 11233468998854 24443 299999999873 458999999999 3
Q ss_pred -ceeecCHHHHHHHHHH
Q 009765 378 -SFEIISERDLMSAMES 393 (526)
Q Consensus 378 -~gEk~~e~~v~~av~~ 393 (526)
.||++.+.+|++++.+
T Consensus 599 s~Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 599 SQGEYIETDMLNNLYSQ 615 (746)
T ss_pred CCCEEEchHHHHHHHhc
Confidence 3899999999988875
No 109
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=98.71 E-value=2.5e-07 Score=104.78 Aligned_cols=127 Identities=11% Similarity=0.078 Sum_probs=74.3
Q ss_pred EEecCch--hhhHHHHHHHhCCCCeeccccccCCceeee--ecCCCC-CCCCcceecCCCceEEEeeeCCCCCccccCCc
Q 009765 250 CVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECYVGI--NLDIAQ-PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEE 324 (526)
Q Consensus 250 ~~~~G~~--~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i--~~~~~~-~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~ 324 (526)
.+++||+ .+...++.+.++.++++ .+||.||+..++ +..... ..+.... ..|+. =+-+++.++. +.
T Consensus 387 ~~~~Ggapl~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~p~~-ev~i~d~~~~------g~ 457 (660)
T PLN02861 387 LLLSGAAPLPRHVEEFLRVTSCSVLS-QGYGLTESCGGCFTSIANVFSMVGTVGV-PMTTI-EARLESVPEM------GY 457 (660)
T ss_pred EEEECCCCCCHHHHHHHHHHcCCCee-EecchhhhhhceeecccccCCCCCCccC-ccCce-EEEEEEcccc------Cc
Confidence 4455553 33344555556656788 999999974322 111100 0011111 22222 2334442211 10
Q ss_pred eeccccccCCceEEEEEcc---CCCeec-------------ceeCCEEEEeeecCCCCEEEEeeeCCC---c-ceeecCH
Q 009765 325 TVDFSGVEIGKMYEVVVTT---YRGFYR-------------YRLGDIVKVVDFYNSSPQVEFVMRAPK---S-SFEIISE 384 (526)
Q Consensus 325 ~l~l~ele~G~~yelVvTt---~~GL~R-------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~---i-~gEk~~e 384 (526)
..+..+..+||.|.. ..|.|. |+|||++++.. .-.+.|+||.++ + .||++++
T Consensus 458 ----~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~GR~kd~Ik~~~G~~I~p 529 (660)
T PLN02861 458 ----DALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP----NGAMKIIDRKKNIFKLSQGEYVAV 529 (660)
T ss_pred ----ccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC----CCcEEEEeccccceEcCCCeEEcH
Confidence 122355678999865 355552 99999999873 357899999999 3 4899999
Q ss_pred HHHHHHHHH
Q 009765 385 RDLMSAMES 393 (526)
Q Consensus 385 ~~v~~av~~ 393 (526)
.+|++++.+
T Consensus 530 ~eIE~~l~~ 538 (660)
T PLN02861 530 ENLENTYSR 538 (660)
T ss_pred HHHHHHHhc
Confidence 999988875
No 110
>PRK06178 acyl-CoA synthetase; Validated
Probab=98.70 E-value=5.7e-07 Score=99.47 Aligned_cols=147 Identities=14% Similarity=0.181 Sum_probs=86.9
Q ss_pred hhhHHHHHHHhCCCCeeccccccCCcee--eeecCCCCCCCC------cceecCCCceEEEeeeCCCCCccccCCceecc
Q 009765 257 SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDIAQPPQT------TRFVMLPTAAYFEFLPFDMEKNEAVGEETVDF 328 (526)
Q Consensus 257 ~~y~~~l~~~~g~v~v~~~~Y~aSEg~i--~i~~~~~~~~~~------~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l 328 (526)
....+.+++.+| .+++...||.||... ++.......+.+ ......|+ .-+++++++. +
T Consensus 341 ~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g-~~v~v~d~~~-------~----- 406 (567)
T PRK06178 341 PDYRQRWRALTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPG-TEFKICDFET-------G----- 406 (567)
T ss_pred HHHHHHHHHHhC-CcccccccccccccccceeccccccCccccccCCcccccccCC-cEEEEEcCCC-------C-----
Confidence 455667777786 555536899999632 221100000000 01112333 3356676443 2
Q ss_pred ccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHH
Q 009765 329 SGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMS 389 (526)
Q Consensus 329 ~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~ 389 (526)
..+..|+.+||+|.+. .|.| .|+|||+++..+ ...+.|+||.++ +.|++++..+|++
T Consensus 407 ~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~i~~~eiE~ 482 (567)
T PRK06178 407 ELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGMSVFPSEVEA 482 (567)
T ss_pred CcCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCEEECHHHHHH
Confidence 2345788999999663 2222 499999998863 357899999998 8899999999998
Q ss_pred HHHHHHHHhccccCceEEEEEEeec-CCCCCceEEEEEEeec
Q 009765 390 AMESFQMMLRNVMAVEIVEFAGYTN-LESSPKKLMIFVEIRE 430 (526)
Q Consensus 390 av~~~~~~l~~~~g~~l~~f~~~~~-~~~~~~~y~l~vE~~~ 430 (526)
++.+. .+ +.+.+++.. ........+.||+...
T Consensus 483 ~l~~~-------~~--v~~~~v~~~~~~~~g~~~~~~v~~~~ 515 (567)
T PRK06178 483 LLGQH-------PA--VLGSAVVGRPDPDKGQVPVAFVQLKP 515 (567)
T ss_pred HHHhC-------CC--eeEEEEEcCcCcccCcceEEEEEeCC
Confidence 88753 23 445554432 1111123456787653
No 111
>PRK12582 acyl-CoA synthetase; Provisional
Probab=98.69 E-value=3.8e-07 Score=102.46 Aligned_cols=57 Identities=30% Similarity=0.360 Sum_probs=40.0
Q ss_pred cCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c-ceeecCHHHHH
Q 009765 332 EIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S-SFEIISERDLM 388 (526)
Q Consensus 332 e~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i-~gEk~~e~~v~ 388 (526)
..|+.+||+|... .|.| .|+|||++++.+.......+.|+||.++ + .|+|+....++
T Consensus 419 ~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE 496 (624)
T PRK12582 419 PVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLR 496 (624)
T ss_pred cCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHH
Confidence 3578889999652 3433 2999999998532111236889999997 3 48999987775
No 112
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.67 E-value=2.2e-06 Score=94.83 Aligned_cols=225 Identities=13% Similarity=0.084 Sum_probs=132.2
Q ss_pred EEecCch---hhhHHHHHHHhCCCCeeccccccCCc-eeeeecCCCC-CCCCcceecCCCceEEEeeeCCCCCccccCCc
Q 009765 250 CVTTGSM---SQYCSKIKYYAGEVPVLGGDYFASEC-YVGINLDIAQ-PPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEE 324 (526)
Q Consensus 250 ~~~~G~~---~~y~~~l~~~~g~v~v~~~~Y~aSEg-~i~i~~~~~~-~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~ 324 (526)
++.+.|. ..-...+.+.++.-|++ +.|+.||+ .+-+...+.. |...|+.-.+.-...++.++++ +
T Consensus 363 ~~~S~Gepi~~~~~ew~~~~~~~~pv~-e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~--------g- 432 (626)
T KOG1175|consen 363 TCGSVGEPINPEAWEWWKRVTGLDPIY-ETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDEN--------G- 432 (626)
T ss_pred EEeecCccCCcchHHHHHHhcCccchh-hceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCC--------C-
Confidence 5555542 23335677778644777 99999997 2222212222 2222333222223456666653 2
Q ss_pred eeccccccCC-ceEEEEEccC------CCee----------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cc
Q 009765 325 TVDFSGVEIG-KMYEVVVTTY------RGFY----------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SS 378 (526)
Q Consensus 325 ~l~l~ele~G-~~yelVvTt~------~GL~----------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~ 378 (526)
.+++.+ +.+||+++.. .++| -|.|||-++.. +.--|.++||.|| +.
T Consensus 433 ----~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd----~dGY~~i~GR~DDviNvs 504 (626)
T KOG1175|consen 433 ----NELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRD----EDGYYWILGRVDDVINVS 504 (626)
T ss_pred ----CCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEc----CCceEEEEeccccccccc
Confidence 234443 7899999764 2233 38999999988 5678999999999 88
Q ss_pred eeecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCc-eEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhH
Q 009765 379 FEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPK-KLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIY 457 (526)
Q Consensus 379 gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~-~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y 457 (526)
|-+++-.+|++|+.+. + .+.|-+|+.-.....+ .-..||=+.++ ..+.+. +.++|-..+
T Consensus 505 GhRigtaEIE~al~~h-p--------~VaEsAvVg~p~~~~ge~v~aFvvl~~g----~~~~~~---L~kel~~~V---- 564 (626)
T KOG1175|consen 505 GHRIGTAEIESALVEH-P--------AVAESAVVGSPDPIKGEVVLAFVVLKSG----SHDPEQ---LTKELVKHV---- 564 (626)
T ss_pred ceeecHHHHHHHHhhC-c--------chhheeeecCCCCCCCeEEEEEEEEcCC----CCChHH---HHHHHHHHH----
Confidence 9999999999999653 1 2445444321111122 22356656543 122222 334443433
Q ss_pred HhhhhcCCC-CCcEEEEe---CCCcHHHHHHHHHHcCCCCCCCCCCcccCCHhHHHHHhcc
Q 009765 458 KVQRDRGEI-SPLSVSIV---KPGTFDRLLQVAIEKGAPASQYKPPKIVRNREIVEFMEGC 514 (526)
Q Consensus 458 ~~~R~~~~l-~p~~v~~v---~~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~ 514 (526)
+...|-+ .|-.|..| |.=...+.+++.+.+-.+.-|++-.-.+.|++.++.+.+.
T Consensus 565 --R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~st~~dp~v~~~~~~~ 623 (626)
T KOG1175|consen 565 --RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDTSTLADPSVIDHLRSI 623 (626)
T ss_pred --HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCccccccccCChHHHHHHHHh
Confidence 1123334 44455555 3334567777777765444499999999999999988764
No 113
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.66 E-value=3.9e-06 Score=88.31 Aligned_cols=295 Identities=15% Similarity=0.097 Sum_probs=156.9
Q ss_pred hHHHHHHHHHHHHHHhc-cCCchhhhhhcCCCCCCChhhHhhcCCCcchhhhhHHHHHHhCCCCCCCCCCCc--cCCCce
Q 009765 17 NATRHQLETLQSILERQ-SGVRYLQPYLSGCCAPIDAATYKRTVPLSCYDDYADHINQLAGGDHGQNDQPLL--AVDPLV 93 (526)
Q Consensus 17 ~~~~~Q~~~L~~iL~~~-~~t~ygr~~f~~i~~~~s~~df~~~vPl~~y~d~~~~ier~~~Ge~~~~~~~~l--~~~~i~ 93 (526)
+-++...+.++++.+++ ++++.||++.+..+...+++++. .+|+.--+-+... .+. +.+.+.
T Consensus 28 e~~~l~~~~~~~~~~~q~~~~~~Yr~~~~~~~~~~~v~~~~-dIP~lPi~~FK~~--------------~L~S~~~e~~~ 92 (365)
T PF04443_consen 28 EKEELFLALALELFRYQYEHNPPYRKYCDALGFDEDVKDLE-DIPFLPIRFFKEH--------------ELLSVPEEEVE 92 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccHH-HCCcchHHHHhhc--------------eeeecChhhhe
Confidence 34555666777777774 89999999944443115577774 6888877777531 222 235677
Q ss_pred eeecccccCCCcceecccChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeccCCccccCCceeeeccchhHHH
Q 009765 94 CFFYSSGTSSMKPKLIPYFDSALSKAASQIAIQGSVAILRRLFPPKHDVNKILFFIYSDNKTTTKAGFKVMAASAFPLQG 173 (526)
Q Consensus 94 ~f~~TSGTTsG~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~gip~g~~s~~~~~~ 173 (526)
....||||| |.+-.|...+........ ..... ++.+ .+....+...+...+.. .....+ +..++..
T Consensus 93 ~~~tSSGTt-G~~S~i~~D~~t~~~~~~-~~~~~----~~~~--~~~~~~~~~il~l~p~~-~~~~~~-----~~~~~~~ 158 (365)
T PF04443_consen 93 KVFTSSGTT-GQPSRIFRDRETAERQQK-SLNKI----FQHF--LGPSRLPMLILDLSPSP-ENRNSF-----SARYAGI 158 (365)
T ss_pred eEEECCCCC-CCCcEEEECHHHHHHHHH-HHHHH----HHhh--cccccCCeEEEEecCCc-ccccch-----HHHHHHH
Confidence 889999998 988888887765544322 11222 2222 12112233333322221 111111 1101111
Q ss_pred HHHHH----hhhH---HHHHHHHHHH----HcCCCCCCCChhHHHHHHHHhhCCCCHHHHHHHHHHhccCCCCCcccccC
Q 009765 174 LIGAF----SFFE---SKWEQLCDDL----ENGYPCLDITEVAMRDSVIEVLGGPQPDLSKRIRSICGESNWSGIFSKLW 242 (526)
Q Consensus 174 ll~~~----~~l~---~~w~~l~~dI----~~g~~~~~~~~~~~r~~l~~~~g~P~p~~a~~L~~~~~~~g~~g~~~~lW 242 (526)
+...+ .++. =+++.+++.+ .+|. |-+ ++|.|. ..-.+...+++.+. --++=
T Consensus 159 ~~~~~~~~~~~l~~~~ld~~~~~~~L~~~~~~~~-------pv~------l~Gftf--~~~~~~~~l~~~~~---~~~L~ 220 (365)
T PF04443_consen 159 LGELFFGSRFALDNDELDLEGLIEALFRAEHSGE-------PVL------LFGFTF--FIWFLLDELEERGI---RFRLP 220 (365)
T ss_pred HhhcccCceeeecCCccCHHHHHHHHHHHHhCCC-------CEE------EECchH--HHHHHHHHHHhcCC---cccCC
Confidence 11000 0111 1234444444 3333 222 676554 22223334555432 22222
Q ss_pred CCCceEEEEecCch----------hhhHHHHHHHhCC---CCeeccccccCCcee-eeecCCCCCCCCcceecCCCceEE
Q 009765 243 PNVRYIKCVTTGSM----------SQYCSKIKYYAGE---VPVLGGDYFASECYV-GINLDIAQPPQTTRFVMLPTAAYF 308 (526)
Q Consensus 243 P~L~~i~~~~~G~~----------~~y~~~l~~~~g~---v~v~~~~Y~aSEg~i-~i~~~~~~~~~~~~~~l~~~~~f~ 308 (526)
++.. .+.+||+ +.+.+.+++.||- -.++ +.||.||... .+ +| +.+.++.++. +..
T Consensus 221 ~~s~---vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~-~~ygmtEl~s~~~----~~--~~~~~~~p~w-V~i 289 (365)
T PF04443_consen 221 KGSI---VIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIY-DMYGMTELNSQAY----EC--GHGHFHVPPW-VII 289 (365)
T ss_pred CCCE---EEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHee-eeeeccccchhhe----eC--CCCcccCCCe-EEE
Confidence 3443 5566764 2555778888862 3777 9999999632 22 22 2244443333 222
Q ss_pred EeeeCCCCCccccCCceeccccccCCceEEEEEccC-----CCeecceeCCEEEEeeecCCC-----CEEEEeeeCCC--
Q 009765 309 EFLPFDMEKNEAVGEETVDFSGVEIGKMYEVVVTTY-----RGFYRYRLGDIVKVVDFYNSS-----PQVEFVMRAPK-- 376 (526)
Q Consensus 309 EFip~~~~~~~~~~~~~l~l~ele~G~~yelVvTt~-----~GL~RYr~GDvV~v~g~~~~~-----P~i~f~gR~~~-- 376 (526)
= + +.| +..+..|+.+-|.|-+. .|. =-|.|+..+.+ .+.| +.|+++||.+.
T Consensus 290 R--D----------p~t--l~~~~~Ge~Gli~vidl~~~s~p~~--IlTeDlGvl~~-~~~c~cr~g~~f~vlGR~~~ae 352 (365)
T PF04443_consen 290 R--D----------PET--LEPLPPGETGLIQVIDLANTSYPGF--ILTEDLGVLHG-DDDCGCRKGKYFEVLGRADGAE 352 (365)
T ss_pred E--C----------CCC--CcCCCCCCeeEEEEEcccccCCCcE--EEEcceeeecC-CCCCCCccCCEEEEEeCCCCCc
Confidence 1 2 333 35688999999888654 334 44999996655 3233 37999999998
Q ss_pred cceeecCHHH
Q 009765 377 SSFEIISERD 386 (526)
Q Consensus 377 i~gEk~~e~~ 386 (526)
++|-.++-++
T Consensus 353 ~RGCs~~~~e 362 (365)
T PF04443_consen 353 IRGCSLTFAE 362 (365)
T ss_pred cCCcHHHHHH
Confidence 9997665443
No 114
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.64 E-value=4.1e-06 Score=87.13 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=35.5
Q ss_pred cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 349 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 349 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
+|+|||++++ . ...+.|+||.++ +.|++++..+|+.++.+.
T Consensus 235 ~~~TGDl~~~-~----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 278 (358)
T PRK07824 235 WFRTDDLGAL-D----DGVLTVLGRADDAISTGGLTVLPQVVEAALATH 278 (358)
T ss_pred ceecccEEEE-e----CCEEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 8999999998 2 247899999998 789999999999988754
No 115
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=98.63 E-value=1.4e-06 Score=94.24 Aligned_cols=58 Identities=10% Similarity=0.178 Sum_probs=45.8
Q ss_pred CCceEEEEEccC---CCee--------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 333 IGKMYEVVVTTY---RGFY--------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 333 ~G~~yelVvTt~---~GL~--------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
.|+.+||+|... .|.| -|+|||++++. ....+.|+||.++ +.|+|+++.+|+.++.+.
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~ 369 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLD----AQGYLHILGRNSQKIITGGENVYPAEVEAAILAT 369 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEc----CCCCEEEEeecCCEEEECCEEECHHHHHHHHHhC
Confidence 488899999542 3322 28999999875 2457889999998 889999999999988864
No 116
>PRK08162 acyl-CoA synthetase; Validated
Probab=98.62 E-value=6.1e-06 Score=90.71 Aligned_cols=56 Identities=16% Similarity=0.250 Sum_probs=45.0
Q ss_pred ceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 335 KMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 335 ~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
+.+||+|+.. .|.| .|+|||++.... .-.+.|+||.++ +.|+++...+|+.++.+.
T Consensus 387 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~ 461 (545)
T PRK08162 387 TIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYRH 461 (545)
T ss_pred ceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHhC
Confidence 3699999873 2333 489999998873 357899999998 889999999999988753
No 117
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=98.62 E-value=6.8e-07 Score=101.32 Aligned_cols=126 Identities=12% Similarity=0.076 Sum_probs=73.0
Q ss_pred EEecCch--hhhHHHHHHHhCCCCeeccccccCCcee--eeecCCC--CCCCCcceecCCCceEEEeeeCCCCCccccCC
Q 009765 250 CVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECYV--GINLDIA--QPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGE 323 (526)
Q Consensus 250 ~~~~G~~--~~y~~~l~~~~g~v~v~~~~Y~aSEg~i--~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~ 323 (526)
.+.+||+ .+...++-+.+++++++ .+||.||+.. .++.... .+.. .. ...++. =+...+.++. +
T Consensus 387 ~~~~gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gs-vG-~p~~~~-evki~d~~~~------g 456 (660)
T PLN02430 387 LLISGGAPLSTEIEEFLRVTSCAFVV-QGYGLTETLGPTTLGFPDEMCMLGT-VG-APAVYN-ELRLEEVPEM------G 456 (660)
T ss_pred EEEECCCCCCHHHHHHHHHhcCCCee-eecchhhhhhceEeeccccCCCCCC-cc-CCCCce-EEEEEEcCCc------C
Confidence 4455553 33344444455567888 9999999732 3321100 0111 11 112221 1222222110 1
Q ss_pred ceeccccccCCceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---c-ceeecC
Q 009765 324 ETVDFSGVEIGKMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---S-SFEIIS 383 (526)
Q Consensus 324 ~~l~l~ele~G~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i-~gEk~~ 383 (526)
..++..|..+||+|... .|.| .|+|||++++.. .-.+.|+||.++ + .||+++
T Consensus 457 ----~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~----dG~l~i~gR~kd~ik~~~G~~V~ 528 (660)
T PLN02430 457 ----YDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILP----NGVLKIIDRKKNLIKLSQGEYVA 528 (660)
T ss_pred ----cccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECC----CCcEEEEEcccccEEcCCCcEEc
Confidence 01233456799999763 4444 489999999863 357899999998 3 389999
Q ss_pred HHHHHHHHHH
Q 009765 384 ERDLMSAMES 393 (526)
Q Consensus 384 e~~v~~av~~ 393 (526)
+.+|+.++.+
T Consensus 529 p~~IE~~l~~ 538 (660)
T PLN02430 529 LEYLENVYGQ 538 (660)
T ss_pred hHHHHHHHhc
Confidence 9999988765
No 118
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.55 E-value=5.1e-07 Score=93.27 Aligned_cols=117 Identities=21% Similarity=0.279 Sum_probs=82.4
Q ss_pred hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCC----CCcceecCCCceEEEeeeCCCCCccccCCceecccccc
Q 009765 257 SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPP----QTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVDFSGVE 332 (526)
Q Consensus 257 ~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~----~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~l~ele 332 (526)
+.-++++...+| |.++ -.+|-.||.+-+--- ..|+ +.....+.|+.- .=.++.+ + .+|.
T Consensus 319 ~~~Arrv~~~lg-C~LQ-QVFGMAEGLvnyTRL-DDp~E~i~~TQGrPlsP~DE-vrvvD~d--------g-----~pv~ 381 (542)
T COG1021 319 ATLARRVPAVLG-CQLQ-QVFGMAEGLVNYTRL-DDPPEIIIHTQGRPLSPDDE-VRVVDAD--------G-----NPVA 381 (542)
T ss_pred HHHHhhchhhhC-chHH-HHhhhhhhhhccccc-CCchHheeecCCCcCCCcce-eEEecCC--------C-----CCCC
Confidence 456678888884 9999 999999997765311 1111 222333445431 1223322 2 3577
Q ss_pred CCceEEEEEc---cCCCeec--------------ceeCCEEEEeeecCCCCEEEEeeeCCC-cc--eeecCHHHHHHHHH
Q 009765 333 IGKMYEVVVT---TYRGFYR--------------YRLGDIVKVVDFYNSSPQVEFVMRAPK-SS--FEIISERDLMSAME 392 (526)
Q Consensus 333 ~G~~yelVvT---t~~GL~R--------------Yr~GDvV~v~g~~~~~P~i~f~gR~~~-i~--gEk~~e~~v~~av~ 392 (526)
+||.++|..- |..|.|| ||+||+|+.. ..--+...||.++ |+ |||+..++|++.+.
T Consensus 382 pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~----~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL 457 (542)
T COG1021 382 PGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRD----PDGYLVVEGRVKDQINRGGEKIAAEEVENLLL 457 (542)
T ss_pred CCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEec----CCceEEEEeeehhhhccccchhhHHHHHHHHh
Confidence 9999999874 4688885 9999999998 4568899999998 44 79999999999887
Q ss_pred HH
Q 009765 393 SF 394 (526)
Q Consensus 393 ~~ 394 (526)
..
T Consensus 458 ~H 459 (542)
T COG1021 458 RH 459 (542)
T ss_pred hC
Confidence 64
No 119
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.48 E-value=1.2e-05 Score=88.43 Aligned_cols=129 Identities=16% Similarity=0.172 Sum_probs=86.8
Q ss_pred CCCceEEEEecCc-h-hhhHHHHHHHhCCCCeeccccccCCc--eeeeecCCC--CCCCCcceecCCCceEEEeeeCCCC
Q 009765 243 PNVRYIKCVTTGS-M-SQYCSKIKYYAGEVPVLGGDYFASEC--YVGINLDIA--QPPQTTRFVMLPTAAYFEFLPFDME 316 (526)
Q Consensus 243 P~L~~i~~~~~G~-~-~~y~~~l~~~~g~v~v~~~~Y~aSEg--~i~i~~~~~--~~~~~~~~~l~~~~~f~EFip~~~~ 316 (526)
|+++.+. ++|+ . ..-..++++.+|...+. .+||.||. .++++.+.. .+.. .+. +.+ ..-=.|..+.
T Consensus 299 ~sl~~v~--~gga~~~~~~~~~~~~~l~~~~v~-q~YGmTE~~~~~~~~~~~~e~k~~s-vG~-~~~--g~~~~v~~e~- 370 (537)
T KOG1176|consen 299 SSLRSVL--SGGAPLSPATLEKVKERLPNVTVI-QGYGMTEAGGLITSNDWGPERKPGS-VGR-LLP--GVRVKVLDET- 370 (537)
T ss_pred CccEEEE--ecCCCCCHHHHHHHHHhCCCceEE-EeeccccccCceeecCCCccCcccc-cCc-ccc--ceEEEeeCCC-
Confidence 4566332 4443 2 46668888999867777 99999997 457777665 2333 333 223 2222333332
Q ss_pred CccccCCceeccccccCCceEEEEEcc---CCCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 317 KNEAVGEETVDFSGVEIGKMYEVVVTT---YRGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 317 ~~~~~~~~~l~l~ele~G~~yelVvTt---~~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
+ .++.+++.+||+|=. ..|-| -|+|||+.-+. .--.+.+++|.++
T Consensus 371 ------g-----~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D----~DG~l~IvdR~KdlIk 435 (537)
T KOG1176|consen 371 ------G-----VSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFD----EDGYLYIVDRSKDLIK 435 (537)
T ss_pred ------C-----CCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEc----CCCeEEEecchhhhee
Confidence 2 234578899999954 35544 48999996555 4568999999999
Q ss_pred cceeecCHHHHHHHHHHH
Q 009765 377 SSFEIISERDLMSAMESF 394 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~ 394 (526)
..|+++.+.+|+++|.+.
T Consensus 436 ~~G~qv~P~EiE~vL~~h 453 (537)
T KOG1176|consen 436 YGGEQVSPAEIEAVLLTH 453 (537)
T ss_pred eCCEEeCHHHHHHHHHhC
Confidence 778999999999988864
No 120
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=98.48 E-value=2.3e-06 Score=97.74 Aligned_cols=59 Identities=15% Similarity=0.212 Sum_probs=45.7
Q ss_pred cCCceEEEEEccC---CCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC----cceeecCHHHHHHH
Q 009765 332 EIGKMYEVVVTTY---RGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK----SSFEIISERDLMSA 390 (526)
Q Consensus 332 e~G~~yelVvTt~---~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~----i~gEk~~e~~v~~a 390 (526)
.+|..+||.|... .|.| -|+|||++++.. .-.+.|+||.++ +.|+++.+.+|+.+
T Consensus 503 ~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~----dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~ 578 (700)
T PTZ00216 503 TPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAA----NGTLRIIGRVKALAKNCLGEYIALEALEAL 578 (700)
T ss_pred CCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcC----CCcEEEEEehHhheecCCCceeccHHHHHH
Confidence 3566789999652 3333 389999999873 457999999998 46899999999988
Q ss_pred HHHH
Q 009765 391 MESF 394 (526)
Q Consensus 391 v~~~ 394 (526)
+.+.
T Consensus 579 l~~~ 582 (700)
T PTZ00216 579 YGQN 582 (700)
T ss_pred HhcC
Confidence 8753
No 121
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=98.40 E-value=2.8e-06 Score=94.49 Aligned_cols=115 Identities=17% Similarity=0.214 Sum_probs=81.9
Q ss_pred EEecCch--hhhHHHHHHHhCCCCeeccccccCCceeeeecCCCCCCCCcceecCCCceEEEeeeCCCCCccccCCceec
Q 009765 250 CVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECYVGINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEKNEAVGEETVD 327 (526)
Q Consensus 250 ~~~~G~~--~~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~~~~~~~~~l~ 327 (526)
-..+||+ ++....+-+-. |+++. .+||-||..-++..++. ..|.+ ++. +.+++
T Consensus 357 ~~~sGGa~l~~~~~~f~~~l-Gi~i~-eGYGlTEts~~~~v~~~----------------~~~~~-gtv------G~p~p 411 (613)
T COG1022 357 YALSGGAPLSPELLHFFRSL-GIPIL-EGYGLTETSAVVSVNPP----------------DRFVL-GTV------GKPLP 411 (613)
T ss_pred EEEecCCcCCHHHHHHHHHc-CCCeE-EEecccccccceEEccc----------------cCccc-CCc------CCcCC
Confidence 3355554 34433333334 49999 99999997544432211 12222 211 67777
Q ss_pred cccccCCceEEEEEcc---CCCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC----cceeecCHHH
Q 009765 328 FSGVEIGKMYEVVVTT---YRGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK----SSFEIISERD 386 (526)
Q Consensus 328 l~ele~G~~yelVvTt---~~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~----i~gEk~~e~~ 386 (526)
--|++.++.+||.|-+ ..|-| =|+|||+.+++. .-.+.++||.++ ..||++.+.-
T Consensus 412 ~~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~----~g~L~i~gRkK~~i~l~~GknIaP~~ 487 (613)
T COG1022 412 GIEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE----DGYLVITGRKKELIKLSNGKNIAPEP 487 (613)
T ss_pred CceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcC----CCcEEEeecccceEECCCCcccChHH
Confidence 7899999999999977 47777 499999999994 478999999999 6789999999
Q ss_pred HHHHHHH
Q 009765 387 LMSAMES 393 (526)
Q Consensus 387 v~~av~~ 393 (526)
++.++.+
T Consensus 488 IE~~l~~ 494 (613)
T COG1022 488 IESKLAK 494 (613)
T ss_pred HHHHHhc
Confidence 9886653
No 122
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.38 E-value=5.3e-05 Score=81.46 Aligned_cols=41 Identities=12% Similarity=0.082 Sum_probs=35.3
Q ss_pred cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 349 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 349 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
.|+|||++++. .-.+.|+||.++ +.|+|++..+|++++.+.
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~ 376 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQH 376 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhcC
Confidence 58999999986 135889999998 789999999999988763
No 123
>PLN02479 acetate-CoA ligase
Probab=98.37 E-value=3.5e-05 Score=85.51 Aligned_cols=55 Identities=22% Similarity=0.267 Sum_probs=44.6
Q ss_pred ceEEEEEccC---CCee-------------cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHH
Q 009765 335 KMYEVVVTTY---RGFY-------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMES 393 (526)
Q Consensus 335 ~~yelVvTt~---~GL~-------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~ 393 (526)
+.+||+++.. .|.| .|+|||++++. ..-.+.|+||.++ +.|++++..+|+.++.+
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 474 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKH----PDGYIEIKDRSKDIIISGGENISSLEVENVVYT 474 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEc----CCccEEEeccccceEEeCCEEEcHHHHHHHHHh
Confidence 5799999863 2222 49999999876 3457999999998 88999999999998875
No 124
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=98.24 E-value=4.3e-05 Score=81.24 Aligned_cols=42 Identities=14% Similarity=0.037 Sum_probs=36.0
Q ss_pred cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 349 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 349 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
.|+|||+++.. ....+.|+||.++ +.|+|+++.+|++++.+.
T Consensus 276 ~~~tgD~g~~d----~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~ 320 (386)
T TIGR02372 276 RLDLQDRLAWD----KDGGFTILGRKDEILQVGGVNVSPGHVRDILERN 320 (386)
T ss_pred eeecCceEEEc----CCCcEEEecccCCEEEECCEEEcHHHHHHHHHcC
Confidence 37899998875 3568999999998 889999999999988863
No 125
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=98.23 E-value=3.3e-06 Score=89.22 Aligned_cols=61 Identities=23% Similarity=0.358 Sum_probs=48.9
Q ss_pred cccCCceEEEEEc---cCCCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC--cce-eecCHHHHHH
Q 009765 330 GVEIGKMYEVVVT---TYRGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK--SSF-EIISERDLMS 389 (526)
Q Consensus 330 ele~G~~yelVvT---t~~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~--i~g-Ek~~e~~v~~ 389 (526)
+++.|..+||.+- +..|.| -|+|||+....- .-.++.+||.++ ++| |++.+.+|++
T Consensus 426 ~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~e----nG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 426 EVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDE----NGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred ccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcC----CCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 4667888999984 445666 499999998874 467899999999 664 9999999988
Q ss_pred HHHHH
Q 009765 390 AMESF 394 (526)
Q Consensus 390 av~~~ 394 (526)
.+.+-
T Consensus 502 fL~~h 506 (596)
T KOG1177|consen 502 FLNKH 506 (596)
T ss_pred HHhhC
Confidence 77753
No 126
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=98.20 E-value=0.00013 Score=78.80 Aligned_cols=227 Identities=15% Similarity=0.121 Sum_probs=129.7
Q ss_pred EEecCchhhhHHHHHHHhCCCCeeccccccCCcee-eeecCCCCCCCCccee-cCCCceEEEeeeCCCCC-c--cccCCc
Q 009765 250 CVTTGSMSQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQPPQTTRFV-MLPTAAYFEFLPFDMEK-N--EAVGEE 324 (526)
Q Consensus 250 ~~~~G~~~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~~~~~~~~~~~~~-l~~~~~f~EFip~~~~~-~--~~~~~~ 324 (526)
++-.|-=+...+.+.+.|| ++-+++.||||||-+ -+|++...-+ -|-+- +.....=|+.|-.+... + -.+++-
T Consensus 362 a~GNGLR~diW~~Fv~RFg-~~~IgE~YgaTEgn~~~~N~d~~vGA-~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~ 439 (649)
T KOG1179|consen 362 AYGNGLRPDIWQQFVKRFG-IIKIGEFYGATEGNSNLVNYDGRVGA-CGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGL 439 (649)
T ss_pred EecCCCCchHHHHHHHHcC-CCeEEEEeccccCcceeeeecCcccc-ccchhhhhhhccceEEEEecCCCCceeecCCce
Confidence 4444444666688889996 555559999999955 4566543211 01111 11112236777665321 1 112222
Q ss_pred eeccccccCCceEEEEEcc--------C---CC--------e---------ecceeCCEEEEeeecCCCCEEEEeeeCCC
Q 009765 325 TVDFSGVEIGKMYEVVVTT--------Y---RG--------F---------YRYRLGDIVKVVDFYNSSPQVEFVMRAPK 376 (526)
Q Consensus 325 ~l~l~ele~G~~yelVvTt--------~---~G--------L---------~RYr~GDvV~v~g~~~~~P~i~f~gR~~~ 376 (526)
. -.+++||.+.||=.- . .| + --|++||++.... ---+-|..|.+|
T Consensus 440 C---i~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~----~GylYF~DRtGD 512 (649)
T KOG1179|consen 440 C---IPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADE----LGYLYFKDRTGD 512 (649)
T ss_pred E---EECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEec----CCcEEEeccCCC
Confidence 2 235788888766321 1 11 2 2499999997763 456789999999
Q ss_pred ---cceeecCHHHHHHHHHHHHHHhccccCceEEEEEE-eecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHH
Q 009765 377 ---SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAG-YTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDA 452 (526)
Q Consensus 377 ---i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~-~~~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~~ 452 (526)
=+||+|+-.+|++.+..... + .. +.-|=| ++..++..+-=.+. ..+ ...-+++++.+.+...
T Consensus 513 TFRWKGENVsTtEVe~~l~~~~~-~---~d--v~VYGV~VP~~EGRaGMAaI~--~~p------~~~~d~~~l~~~l~~~ 578 (649)
T KOG1179|consen 513 TFRWKGENVSTTEVEDVLSALDF-L---QD--VNVYGVTVPGYEGRAGMAAIV--LDP------TTEKDLEKLYQHLREN 578 (649)
T ss_pred ceeecCCcccHHHHHHHHhhhcc-c---cc--eeEEEEecCCccCccceEEEE--ecC------cccchHHHHHHHHHhh
Confidence 88999999999887775422 2 11 112222 33444433332233 221 1223455566777666
Q ss_pred hChhHHhhhhcCCCCCcEEEEeCCCcHHHHHHHHHHcCCCCCCCCCCcccCC
Q 009765 453 FGSIYKVQRDRGEISPLSVSIVKPGTFDRLLQVAIEKGAPASQYKPPKIVRN 504 (526)
Q Consensus 453 Ln~~Y~~~R~~~~l~p~~v~~v~~g~f~~~~~~~~~~G~~~~Q~K~Pr~~~~ 504 (526)
| |.|+.=|......-. =.-|||.--....+..|-..++++-|--+-|
T Consensus 579 L-P~YA~P~FlRl~~~i----~~TgTFKl~K~~L~~egf~p~~~~dply~~~ 625 (649)
T KOG1179|consen 579 L-PSYARPRFLRLQDEI----EKTGTFKLQKTELQKEGFNPAIISDPLYYLD 625 (649)
T ss_pred C-ccccchHHHHHHhhh----hcccchhhHHHHHHHccCCccccCCceEEEe
Confidence 6 556665544422222 2458999666666566888888888866433
No 127
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.13 E-value=4.5e-05 Score=90.56 Aligned_cols=139 Identities=14% Similarity=0.100 Sum_probs=82.5
Q ss_pred CCCceEEEEecCchh-hhHHHHHHHhCCCCeeccccccCCceeee-ecCCCCCCCCcceecCCCceEEEeeeCCCC-Cc-
Q 009765 243 PNVRYIKCVTTGSMS-QYCSKIKYYAGEVPVLGGDYFASECYVGI-NLDIAQPPQTTRFVMLPTAAYFEFLPFDME-KN- 318 (526)
Q Consensus 243 P~L~~i~~~~~G~~~-~y~~~l~~~~g~v~v~~~~Y~aSEg~i~i-~~~~~~~~~~~~~~l~~~~~f~EFip~~~~-~~- 318 (526)
+.++ .+++|++. ...+++.+.+++++++ +.||.||+.+.+ +..... +..... ..|+..-++..+.+.. +.
T Consensus 720 ~slr---~~~g~gl~~~l~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~-~~svG~-p~pg~~~v~i~~~d~~~g~l 793 (994)
T PRK07868 720 HPVR---LFIGSGMPTGLWERVVEAFAPAHVV-EFFATTDGQAVLANVSGAK-IGSKGR-PLPGAGRVELAAYDPEHDLI 793 (994)
T ss_pred CceE---EEecCCCCHHHHHHHHHHhCchhee-eeeecccccccccccCCCC-CcccCC-ccCCCCceeEEEecCcCCce
Confidence 3566 33455654 4557788888779999 999999985422 111111 111122 2333212333221100 00
Q ss_pred -cccCCceeccccccCCceEEEEEccC----------CCee-----cceeCCEEEEeeecCCCCEEEEeeeCCC---cce
Q 009765 319 -EAVGEETVDFSGVEIGKMYEVVVTTY----------RGFY-----RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSF 379 (526)
Q Consensus 319 -~~~~~~~l~l~ele~G~~yelVvTt~----------~GL~-----RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~g 379 (526)
-.+++ ...++++|+.+||.+... .|.+ -|+|||++++. .--.+.|+||.++ +.|
T Consensus 794 i~d~~G---~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d----~dG~l~~~GR~dd~Ik~~G 866 (994)
T PRK07868 794 LEDDRG---FVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRD----DDGDYWLVDRRGSVIRTAR 866 (994)
T ss_pred eecCCc---eEEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEc----CCCCEEEeccCCCEEEeCC
Confidence 00011 012467899999998653 1222 38899999886 3457999999999 448
Q ss_pred eecCHHHHHHHHHHH
Q 009765 380 EIISERDLMSAMESF 394 (526)
Q Consensus 380 Ek~~e~~v~~av~~~ 394 (526)
++++..+|+++|.+.
T Consensus 867 ~~I~p~EIE~~L~~h 881 (994)
T PRK07868 867 GPVYTEPVTDALGRI 881 (994)
T ss_pred ceEcHHHHHHHHhcC
Confidence 999999999988864
No 128
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=98.09 E-value=0.00014 Score=81.07 Aligned_cols=132 Identities=17% Similarity=0.155 Sum_probs=82.5
Q ss_pred ccCCCCceEEEEecCchhh--hHHHHHHHhCCCCeeccccccCCceeeeecC-CCCC-CCCcceecCCCceEEEeeeCCC
Q 009765 240 KLWPNVRYIKCVTTGSMSQ--YCSKIKYYAGEVPVLGGDYFASECYVGINLD-IAQP-PQTTRFVMLPTAAYFEFLPFDM 315 (526)
Q Consensus 240 ~lWP~L~~i~~~~~G~~~~--y~~~l~~~~g~v~v~~~~Y~aSEg~i~i~~~-~~~~-~~~~~~~l~~~~~f~EFip~~~ 315 (526)
.||++.+ .+++|++.. -...+-....+++++ .+||-||+..|..+. +.+. .++..- ..|. +-+=++++.+
T Consensus 416 ~LGg~vr---~~~sGaAPls~ev~~F~r~~~g~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~-p~p~-~~vKL~dvpe 489 (691)
T KOG1256|consen 416 SLGGNVR---LIISGAAPLSPEVLTFFRAALGCRVL-EGYGLTETSAGTTLTLPGDNVLGSVGP-PVPG-NEVKLVDVPE 489 (691)
T ss_pred HhcCcee---EEEecCCCCCHHHHHHHHHhcCceee-ecccccccCCceEeccCCCCCCCCcCC-cccC-ceEEEechHH
Confidence 5777887 668887532 222222223369999 999999986333221 1111 121222 2222 2234444443
Q ss_pred CCccccCCceeccccccCCceEEEEEcc---CCCee--------------cceeCCEEEEeeecCCCCEEEEeeeCCC--
Q 009765 316 EKNEAVGEETVDFSGVEIGKMYEVVVTT---YRGFY--------------RYRLGDIVKVVDFYNSSPQVEFVMRAPK-- 376 (526)
Q Consensus 316 ~~~~~~~~~~l~l~ele~G~~yelVvTt---~~GL~--------------RYr~GDvV~v~g~~~~~P~i~f~gR~~~-- 376 (526)
. .--..|..+||.|=- ..|.| -.+|||+.+... .-.+...+|.++
T Consensus 490 ~------------ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~G~l~IidRkK~if 553 (691)
T KOG1256|consen 490 M------------NYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----NGTLKIIDRKKNIF 553 (691)
T ss_pred h------------CcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----CccEEEEecccceE
Confidence 2 112345678998833 46666 589999999994 568999999998
Q ss_pred --cceeecCHHHHHHHHHH
Q 009765 377 --SSFEIISERDLMSAMES 393 (526)
Q Consensus 377 --i~gEk~~e~~v~~av~~ 393 (526)
--||.+.+..|+++..+
T Consensus 554 klaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 554 KLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred EcCCCCccChHHHHHHHhc
Confidence 44799999999988875
No 129
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=97.49 E-value=0.0054 Score=66.51 Aligned_cols=144 Identities=17% Similarity=0.142 Sum_probs=86.7
Q ss_pred CCceEEEEecCch--hhhHHHHHHHhCCCCeeccccccCCcee-eeecCCCCCCCCcceecCCCceEEEeeeCCCCC-cc
Q 009765 244 NVRYIKCVTTGSM--SQYCSKIKYYAGEVPVLGGDYFASECYV-GINLDIAQPPQTTRFVMLPTAAYFEFLPFDMEK-NE 319 (526)
Q Consensus 244 ~L~~i~~~~~G~~--~~y~~~l~~~~g~v~v~~~~Y~aSEg~i-~i~~~~~~~~~~~~~~l~~~~~f~EFip~~~~~-~~ 319 (526)
+|+ -+.+||+ ++-.+++-..+=.+|+. -+||-||..- |.-.++++-. -|.-=.+...+.+-.++.++.+ ..
T Consensus 403 ~lR---~~LsGGapLS~dtQrF~nic~C~Pv~-qGYGLTEtca~~tv~e~~d~~-~g~vG~pl~c~eiKLvdw~EgGY~~ 477 (678)
T KOG1180|consen 403 NLR---YILSGGAPLSPDTQRFMNICFCCPVL-QGYGLTETCAAATVLEPEDFS-TGRVGAPLPCCEIKLVDWEEGGYFA 477 (678)
T ss_pred ceE---EEEeCCCCCCHHHHHHHHHhcccccc-ccccccchhcccEecChhhcc-cccccCCccceEEEEEEhhhcCccC
Confidence 566 3366654 56666666554337999 9999999744 3323333221 1110011123456666665431 00
Q ss_pred ccCCceeccccccCCceEEEEEccC--------------------CCeecceeCCEEEEeeecCCCCEEEEeeeCCC---
Q 009765 320 AVGEETVDFSGVEIGKMYEVVVTTY--------------------RGFYRYRLGDIVKVVDFYNSSPQVEFVMRAPK--- 376 (526)
Q Consensus 320 ~~~~~~l~l~ele~G~~yelVvTt~--------------------~GL~RYr~GDvV~v~g~~~~~P~i~f~gR~~~--- 376 (526)
..+ + =++||+|+.. .|---|+||||.++. .--+++...|.++
T Consensus 478 ~~~----------P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~----pdG~LkIIDRKKdLVK 542 (678)
T KOG1180|consen 478 KNK----------P-PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFH----PDGCLKIIDRKKDLVK 542 (678)
T ss_pred CCC----------C-CCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceec----CCCcEEEeechhhhhh
Confidence 000 1 1566776542 333358999999998 3569999999998
Q ss_pred -cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCC
Q 009765 377 -SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLE 416 (526)
Q Consensus 377 -i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~ 416 (526)
.+||-++=.-|+.|+..- . -+.+-|+++|..
T Consensus 543 lq~GEYIsL~KvEa~l~s~-p--------~V~NICvyAd~~ 574 (678)
T KOG1180|consen 543 LQNGEYISLGKVEAALRSS-P--------YVDNICVYADSN 574 (678)
T ss_pred hcccceeehHHHHHHHhcC-c--------chhheEEecccc
Confidence 889999999998877642 1 133557777763
No 130
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.14 E-value=0.00063 Score=57.86 Aligned_cols=84 Identities=23% Similarity=0.362 Sum_probs=54.0
Q ss_pred eeecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHhChhHH
Q 009765 379 FEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAFGSIYK 458 (526)
Q Consensus 379 gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~ 458 (526)
|.++++.+|+++|.+. + ++. .+|.+.+...+......+.||...+ ...+....+.++++|.++|
T Consensus 1 GvnvfP~~Ie~vl~~~-~------~~~-~~y~i~v~~~~~~D~l~v~vE~~~~---~~~~~~~~~~l~~~i~~~l----- 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREF-P------EVS-PEYQIVVTREGGLDELTVRVELRPG---FSDDAEDLEALAERIAERL----- 64 (96)
T ss_dssp TEEE-HHHHHHHHCTS-T------TEE-EEEEEEEEEETTEEEEEEEEEESTT---CCTTHHHHHHHHHHHHHHH-----
T ss_pred CcEECHHHHHHHHHhC-c------CCC-CcEEEEEEcCCCCcEEEEEEEECCc---cCcchHHHHHHHHHHHHHH-----
Confidence 6789999999988865 2 322 2888887654445677789998754 1122355667788888888
Q ss_pred hhhhcCCCCCcEEEEeCCCcHHH
Q 009765 459 VQRDRGEISPLSVSIVKPGTFDR 481 (526)
Q Consensus 459 ~~R~~~~l~p~~v~~v~~g~f~~ 481 (526)
|..-.+.| +|.+|++|++++
T Consensus 65 --k~~lgv~~-~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 --KERLGVRP-EVELVPPGTLPR 84 (96)
T ss_dssp --HHHHSS-E-EEEEE-TT-S--
T ss_pred --HhhcCceE-EEEEECCCCccC
Confidence 43334554 999999999997
No 131
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.62 E-value=0.012 Score=66.25 Aligned_cols=59 Identities=20% Similarity=0.304 Sum_probs=44.4
Q ss_pred cccCCceEEEEEccC---CC-----------ee---cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHH
Q 009765 330 GVEIGKMYEVVVTTY---RG-----------FY---RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMS 389 (526)
Q Consensus 330 ele~G~~yelVvTt~---~G-----------L~---RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~ 389 (526)
.+..|..+|+.|+.. -| +. -|+|||+++-. ..-.++|+||.|. ++|..+-..+|+.
T Consensus 561 ~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~----~dg~~e~lgr~D~qvki~g~Riel~eie~ 636 (642)
T COG1020 561 PLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPL----ADGALEYLGRKDSQVKIRGFRIELGEIEA 636 (642)
T ss_pred cCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeEC----CCCeEEEeccccceeEeceEecCcHHHHH
Confidence 455788899999874 22 11 39999999933 3458999999886 8899998888877
Q ss_pred HHH
Q 009765 390 AME 392 (526)
Q Consensus 390 av~ 392 (526)
++.
T Consensus 637 ~l~ 639 (642)
T COG1020 637 ALA 639 (642)
T ss_pred HHh
Confidence 665
No 132
>PRK09188 serine/threonine protein kinase; Provisional
Probab=86.05 E-value=6.8 Score=41.51 Aligned_cols=40 Identities=10% Similarity=-0.057 Sum_probs=31.9
Q ss_pred cceeCCEEEEeeecCCCCEEEEeeeCCCcce---eecCHHHHHHHHHHH
Q 009765 349 RYRLGDIVKVVDFYNSSPQVEFVMRAPKSSF---EIISERDLMSAMESF 394 (526)
Q Consensus 349 RYr~GDvV~v~g~~~~~P~i~f~gR~~~i~g---Ek~~e~~v~~av~~~ 394 (526)
-|+|||++.+.+ ..-.+.|+||.+ .| +++++. |++++.+.
T Consensus 210 W~~TGDlg~~~d---~dG~l~~~gR~~--~G~~i~nV~p~-IE~~L~~h 252 (365)
T PRK09188 210 WLATGKKVYNFI---TRGLFSWSDGEG--TGDRIDNEAPA-IQAALKSD 252 (365)
T ss_pred EEeCCCEEEEEc---CCCeEEEEecCc--CCcCceeeCHH-HHHHHHhC
Confidence 589999998732 245699999999 46 899999 98887764
No 133
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=74.22 E-value=4.9 Score=36.67 Aligned_cols=44 Identities=25% Similarity=0.302 Sum_probs=33.7
Q ss_pred ccCCceEEEEEccC--CCeecc----eeCCEEEEeeecCCCCEEEEeeeCCC
Q 009765 331 VEIGKMYEVVVTTY--RGFYRY----RLGDIVKVVDFYNSSPQVEFVMRAPK 376 (526)
Q Consensus 331 le~G~~yelVvTt~--~GL~RY----r~GDvV~v~g~~~~~P~i~f~gR~~~ 376 (526)
|.+|+.-+|.||.. +|-+++ ..+|+=.|..- ..|+|+|.|...+
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dvRvvkdi--~pPRI~l~Y~L~d 96 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDVRVVKDI--YPPRIELSYTLTD 96 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcEEEEccC--CCCcEEEEEEEEC
Confidence 78999999999995 997766 55666545444 4689999988763
No 134
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=50.07 E-value=40 Score=26.68 Aligned_cols=48 Identities=17% Similarity=0.128 Sum_probs=36.4
Q ss_pred eecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEEe
Q 009765 380 EIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEI 428 (526)
Q Consensus 380 Ek~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~ 428 (526)
++..|+.++.||.+|.+.+.++.++.+.++.+.... +.-.+|.+-+.+
T Consensus 13 ~~S~edAv~~Av~~A~kTl~ni~~~eV~e~~~~v~d-g~i~~y~v~lkv 60 (66)
T PF07311_consen 13 PKSWEDAVQNAVARASKTLRNIRWFEVKEQRGHVED-GKITEYQVNLKV 60 (66)
T ss_dssp SSHHHHHHHHHHHHHHHHSSSEEEEEEEEEEEEEET-TCEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhchhCcEEEEEEEEEEEEeC-CcEEEEEEEEEE
Confidence 567799999999999998865567777777776655 335788866654
No 135
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=35.59 E-value=1.5e+02 Score=25.28 Aligned_cols=43 Identities=16% Similarity=0.277 Sum_probs=31.4
Q ss_pred cceeecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEEeec
Q 009765 377 SSFEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIRE 430 (526)
Q Consensus 377 i~gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~ 430 (526)
+-.+. ..+.+.+.+...+. + .++.+.+|++. |-|+.+++++.+
T Consensus 18 ~~~~~-~~~~l~~~l~~~~~--~--~~~~i~~~~vm------~nHvHllv~~~~ 60 (121)
T PF01797_consen 18 LFNDE-IREALLEILREICE--E--YGIEIIAFVVM------PNHVHLLVSIPP 60 (121)
T ss_dssp SSSHH-HHHHHHHHHHHHHH--H--TTEEEEEEEEE------TTEEEEEEEE-T
T ss_pred eeehh-eeeeeeeccccccc--c--ccceeeeeccc------Ccccceeeeecc
Confidence 43444 56677788888877 4 58899998877 559999999864
No 136
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=31.51 E-value=72 Score=38.39 Aligned_cols=42 Identities=24% Similarity=0.226 Sum_probs=35.6
Q ss_pred cceeCCEEEEeeecCCCCEEEEeeeCCC---cceeecCHHHHHHHHHHH
Q 009765 349 RYRLGDIVKVVDFYNSSPQVEFVMRAPK---SSFEIISERDLMSAMESF 394 (526)
Q Consensus 349 RYr~GDvV~v~g~~~~~P~i~f~gR~~~---i~gEk~~e~~v~~av~~~ 394 (526)
+||+||.++.. +.--++|.||.++ ++|-++.=.++..++..-
T Consensus 455 ~y~tgD~gr~l----~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~ 499 (1032)
T KOG1178|consen 455 IYRTGDNGRSL----KNGGLEISGRADRQIKDRGVRIELGELNTVVEVH 499 (1032)
T ss_pred cccccccceee----cCCCEEEEEeccceEEEccEEEehhhhchhhccC
Confidence 79999999888 4457899999998 889998888887777654
No 137
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=31.36 E-value=2.8e+02 Score=23.18 Aligned_cols=58 Identities=12% Similarity=0.212 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHh
Q 009765 384 ERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAF 453 (526)
Q Consensus 384 e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~~L 453 (526)
+..+..++..+.. .|+.+...-.++.. ..++.|.+|||+... ....++++.+.|.+.|
T Consensus 25 pGsL~~vL~~Fa~-----~~INLt~IeSRP~~-~~~~~Y~FfVDieg~------~~~~~~~~l~~L~~~~ 82 (90)
T cd04931 25 VGALAKVLRLFEE-----KDINLTHIESRPSR-LNKDEYEFFINLDKK------SAPALDPIIKSLRNDI 82 (90)
T ss_pred CcHHHHHHHHHHH-----CCCCEEEEEeccCC-CCCceEEEEEEEEcC------CCHHHHHHHHHHHHHh
Confidence 4557777777755 57777765555533 336789999998632 1234444555555544
No 138
>PF08990 Docking: Erythronolide synthase docking; InterPro: IPR015083 The N-terminal docking domain found in modular polyketide synthase assumes an alpha-helical structure, wherein two alpha-helices are connected by a short loop. Two such N-terminal domains dimerise to form amphipathic parallel alpha-helical coiled coils: dimerisation is essential for protein function []. ; GO: 0016740 transferase activity, 0048037 cofactor binding; PDB: 2HG4_E.
Probab=24.30 E-value=97 Score=20.10 Aligned_cols=24 Identities=29% Similarity=0.394 Sum_probs=14.5
Q ss_pred CChHHHHHH-HHHHHHhHHHHHHHH
Q 009765 2 MTDEDILKK-LEDSTKNATRHQLET 25 (526)
Q Consensus 2 ~~~~~~~~~-~e~~~~~~~~~Q~~~ 25 (526)
|.+++.++. +...+.++.+.++++
T Consensus 1 M~~e~kLr~YLkr~t~eL~~~r~RL 25 (27)
T PF08990_consen 1 MANEDKLRDYLKRVTAELRRARRRL 25 (27)
T ss_dssp ---HCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555 444589999988764
No 139
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo. It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A.
Probab=23.79 E-value=56 Score=26.84 Aligned_cols=26 Identities=27% Similarity=0.579 Sum_probs=15.9
Q ss_pred ccCCceEEEEEccCCC--eecceeCCEE
Q 009765 331 VEIGKMYEVVVTTYRG--FYRYRLGDIV 356 (526)
Q Consensus 331 le~G~~yelVvTt~~G--L~RYr~GDvV 356 (526)
-..|++|+++|.+..| +|||--|=.+
T Consensus 20 f~sgq~~D~~v~d~~g~~vwrwS~~~~F 47 (82)
T PF12690_consen 20 FPSGQRYDFVVKDKEGKEVWRWSDGKMF 47 (82)
T ss_dssp ESSS--EEEEEE-TT--EEEETTTT---
T ss_pred eCCCCEEEEEEECCCCCEEEEecCCchh
Confidence 3489999999999888 9999755443
No 140
>PTZ00297 pantothenate kinase; Provisional
Probab=22.85 E-value=86 Score=39.39 Aligned_cols=28 Identities=7% Similarity=0.146 Sum_probs=24.3
Q ss_pred CEEEEeeeCCC----cceeecCHHHHHHHHHH
Q 009765 366 PQVEFVMRAPK----SSFEIISERDLMSAMES 393 (526)
Q Consensus 366 P~i~f~gR~~~----i~gEk~~e~~v~~av~~ 393 (526)
-.+.++||.++ -.||++.+..|++++..
T Consensus 850 G~L~IidRkKdlikls~GEyVaP~~IE~~l~~ 881 (1452)
T PTZ00297 850 RTLRLLGPPLGILLPVAYEYVIAAELERIFSQ 881 (1452)
T ss_pred CeEEEEeccccceECCCCcEEcHHHHHHHHhc
Confidence 48999999999 56899999999988754
No 141
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=21.93 E-value=80 Score=23.84 Aligned_cols=16 Identities=25% Similarity=0.875 Sum_probs=12.6
Q ss_pred ceeCCEEEEeeecCCCCEE
Q 009765 350 YRLGDIVKVVDFYNSSPQV 368 (526)
Q Consensus 350 Yr~GDvV~v~g~~~~~P~i 368 (526)
|.+||+|+... +.|.+
T Consensus 1 f~~GDvV~LKS---GGp~M 16 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRM 16 (53)
T ss_pred CCCCCEEEEcc---CCCCe
Confidence 67999999987 46754
No 142
>TIGR02778 ligD_pol DNA polymerase LigD, polymerase domain. DNA repair of double-stranded breaks by non-homologous end joining (NHEJ) is accomplished by a two-protein system that is present in a minority of prokaryotes. One component is the Ku protein (see TIGR02772), which binds DNA ends. The other is a DNA ligase, a protein that is a multidomain polypeptide in most of those bacteria that have NHEJ, a permuted polypeptide in Mycobacterium tuberculosis and a few other species, and the product of tandem genes in some other bacteria. This model represents the polymerase domain.
Probab=21.72 E-value=62 Score=32.36 Aligned_cols=43 Identities=16% Similarity=0.164 Sum_probs=28.0
Q ss_pred CceeeecccccCCCcceecccChHH-HHHHHHHHHHHHHHHHHHhc
Q 009765 91 PLVCFFYSSGTSSMKPKLIPYFDSA-LSKAASQIAIQGSVAILRRL 135 (526)
Q Consensus 91 ~i~~f~~TSGTTsG~~K~iP~t~~~-~~~~~~~~~~~~~~~~~~~~ 135 (526)
.+..|.+|||.+ |-.-++|...+. .++.+. ++..+....-+.+
T Consensus 147 gL~~f~KTSG~k-GlHV~vPl~~~~~~~~~r~-fa~~iA~~l~~~~ 190 (245)
T TIGR02778 147 GLESFVKTSGGK-GLHVYVPLRPTLSWDEVKD-FAKALAQALAQQM 190 (245)
T ss_pred CCccceEccCCC-eEEEEEECCCCCCHHHHHH-HHHHHHHHHHHHC
Confidence 467899999998 999999997642 344222 3444444444444
No 143
>PF12401 DUF3662: Protein of unknown function (DUF2662) ; InterPro: IPR022128 This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with PF00498 from PFAM. ; PDB: 2LC0_A.
Probab=21.27 E-value=90 Score=27.40 Aligned_cols=84 Identities=10% Similarity=0.100 Sum_probs=38.5
Q ss_pred eeecCHHHHHHHHHHHHHHhccccCceEEEEEEeecCCCCCceEEEEEEeecCccccCCCHHHHHHHHHHHHHHh-ChhH
Q 009765 379 FEIISERDLMSAMESFQMMLRNVMAVEIVEFAGYTNLESSPKKLMIFVEIREGCTKLRDSVAILRRCCSSLEDAF-GSIY 457 (526)
Q Consensus 379 gEk~~e~~v~~av~~~~~~l~~~~g~~l~~f~~~~~~~~~~~~y~l~vE~~~~~~~~~~~~~~~~~~~~~ld~~L-n~~Y 457 (526)
+-.+-+.+|..+|.+.+. . ++. .+-.+..--|-+|++.+-.. +...+..+...|.+.| ....
T Consensus 21 ~~~vqPvEIa~~L~remd--~---~a~----~~~~~r~~aPN~y~V~Ls~~--------D~~~l~~~~~~l~~el~~~l~ 83 (116)
T PF12401_consen 21 RSEVQPVEIAKALRREMD--D---QAR----VVSRGRTLAPNVYTVELSPE--------DYERLSPWGDRLARELADYLA 83 (116)
T ss_dssp TTSS-THHHHHHHHHHHH--H---T-B-------TT--B---EEEEEEEHH--------HHHHH-S-SHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHH--h---CCe----ecCCCCEEcCeeEEEEECHH--------HHHHHhhhHHHHHHHHHHHHH
Confidence 455789999999999888 2 211 11111111256887665321 1222222223333344 2223
Q ss_pred HhhhhcC--CCCCcEEEEeCCCcH
Q 009765 458 KVQRDRG--EISPLSVSIVKPGTF 479 (526)
Q Consensus 458 ~~~R~~~--~l~p~~v~~v~~g~f 479 (526)
+.+++.| -.+|+.|++.....+
T Consensus 84 ~~a~~qgy~~~G~v~V~~~~d~~L 107 (116)
T PF12401_consen 84 EHAREQGYTFVGPVTVEFEEDPDL 107 (116)
T ss_dssp HHHHHHT-B-SS--EEEEEEETTS
T ss_pred HHHHHCCCeecCCEEEEEEECCCC
Confidence 4445566 469999999776543
No 144
>COG2026 RelE Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]
Probab=20.97 E-value=1.4e+02 Score=24.80 Aligned_cols=30 Identities=20% Similarity=0.317 Sum_probs=20.1
Q ss_pred EEEEEccCCCeecceeCCEEEEeeecCCCC
Q 009765 337 YEVVVTTYRGFYRYRLGDIVKVVDFYNSSP 366 (526)
Q Consensus 337 yelVvTt~~GL~RYr~GDvV~v~g~~~~~P 366 (526)
+-......+|+||+|+||-.-+-.......
T Consensus 43 ~k~~~~~~~~~~R~RiG~YRlIy~i~d~~~ 72 (90)
T COG2026 43 GKKLRKGLSGKYRLRIGDYRLIYEIDDETL 72 (90)
T ss_pred ceecccCCCCeEEEEecCEEEEEEEECCce
Confidence 344555678899999999655555544444
No 145
>cd04861 LigD_Pol_like LigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. PaeLigD is monomeric, containing an N-terminal phosphoesterase module, a central polymerase (Pol) domain, and a C-terminal ATP-dependent ligase domain. Mycobacterium tuberculosis (Mt)LigD, also found in this group, is monomeric and contains the same modules but these are arranged differently: an N-terminal Pol domain, a central phosphoesterase module, and a C-terminal ligase domain. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase do
Probab=20.68 E-value=67 Score=31.75 Aligned_cols=43 Identities=21% Similarity=0.181 Sum_probs=27.5
Q ss_pred CceeeecccccCCCcceecccChH-HHHHHHHHHHHHHHHHHHHhc
Q 009765 91 PLVCFFYSSGTSSMKPKLIPYFDS-ALSKAASQIAIQGSVAILRRL 135 (526)
Q Consensus 91 ~i~~f~~TSGTTsG~~K~iP~t~~-~~~~~~~~~~~~~~~~~~~~~ 135 (526)
.+..|.+|||++ |-.-++|.... ..+..+. ++..+....-+.+
T Consensus 131 gL~~f~KTSG~k-GlHV~vPl~~~~~~~~~r~-fa~~iA~~l~~~~ 174 (227)
T cd04861 131 GLESFPKTSGGK-GLHVYVPLAPRYTWDEVRA-FAKALARELARRL 174 (227)
T ss_pred CCccceEccCCC-eEEEEEEcCCCCCHHHHHH-HHHHHHHHHHHHC
Confidence 467899999999 99999999753 2333222 3444443344444
No 146
>cd04865 LigD_Pol_like_2 LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=20.51 E-value=67 Score=31.78 Aligned_cols=44 Identities=18% Similarity=0.080 Sum_probs=28.2
Q ss_pred CCceeeecccccCCCcceecccChHH-HHHHHHHHHHHHHHHHHHhc
Q 009765 90 DPLVCFFYSSGTSSMKPKLIPYFDSA-LSKAASQIAIQGSVAILRRL 135 (526)
Q Consensus 90 ~~i~~f~~TSGTTsG~~K~iP~t~~~-~~~~~~~~~~~~~~~~~~~~ 135 (526)
-.+..|.+|||.+ |-.-++|..... .+..+. ++..+....-+.+
T Consensus 131 lgL~sf~KTSG~k-GlHv~vPl~~~~~~~~~r~-fa~~iA~~l~~~~ 175 (228)
T cd04865 131 LGLRGYPKTSGAR-GLHIYVPIAPRYTFEEVRR-FAELLAREVERRL 175 (228)
T ss_pred cCCccceEccCCC-eEEEEEEcCCCCCHHHHHH-HHHHHHHHHHHHC
Confidence 3467899999999 999999997542 333222 3444444444444
No 147
>cd04866 LigD_Pol_like_3 LigD_Pol_like_3: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 3. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated repair DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=20.28 E-value=77 Score=31.25 Aligned_cols=22 Identities=27% Similarity=0.224 Sum_probs=19.5
Q ss_pred CCceeeecccccCCCcceecccC
Q 009765 90 DPLVCFFYSSGTSSMKPKLIPYF 112 (526)
Q Consensus 90 ~~i~~f~~TSGTTsG~~K~iP~t 112 (526)
-.+..|.+|||.+ |-.-++|..
T Consensus 125 lgL~~f~KTSG~k-GlHV~vPl~ 146 (223)
T cd04866 125 LGLTSFVKTSGNK-GLQVYIPLP 146 (223)
T ss_pred cCCccceEccCCC-eEEEEEEcC
Confidence 3467899999999 999999998
No 148
>PF13933 HRXXH: Putative peptidase family
Probab=20.28 E-value=2.8e+02 Score=27.67 Aligned_cols=44 Identities=9% Similarity=0.225 Sum_probs=28.7
Q ss_pred ChHHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCchhhhhhcCC
Q 009765 3 TDEDILKKLEDSTKNATRHQLETLQSILERQSGVRYLQPYLSGC 46 (526)
Q Consensus 3 ~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~t~ygr~~f~~i 46 (526)
|+.-..+.+.....+..++=+..=..||+...+++|+|+||..-
T Consensus 51 CN~T~r~qL~~al~ea~~lA~~AkdhlLr~G~~s~~f~kyFGn~ 94 (245)
T PF13933_consen 51 CNATQRRQLNSALDEAVELAAHAKDHLLRWGNSSEFFRKYFGNG 94 (245)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHhcCCC
Confidence 44445566666666655555555455667778899999997753
Done!