Query 009766
Match_columns 526
No_of_seqs 201 out of 1163
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 12:31:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dce_A Protein (RAB geranylger 100.0 1.1E-56 3.8E-61 490.2 38.0 422 1-508 1-431 (567)
2 3dss_A Geranylgeranyl transfer 100.0 3.1E-53 1E-57 437.2 34.1 315 1-511 2-324 (331)
3 3q7a_A Farnesyltransferase alp 100.0 9.5E-47 3.3E-51 391.4 17.1 230 10-255 39-276 (349)
4 3dra_A Protein farnesyltransfe 100.0 6.5E-44 2.2E-48 363.4 20.4 211 10-236 18-235 (306)
5 3dra_A Protein farnesyltransfe 100.0 3.5E-31 1.2E-35 269.6 16.9 188 39-233 84-305 (306)
6 3dss_A Geranylgeranyl transfer 100.0 2.9E-29 9.8E-34 258.6 21.0 176 42-231 91-280 (331)
7 3q7a_A Farnesyltransferase alp 99.9 3.9E-27 1.3E-31 244.4 15.8 168 52-236 47-216 (349)
8 2h6f_A Protein farnesyltransfe 99.9 7E-25 2.4E-29 228.2 23.6 194 20-233 92-286 (382)
9 1dce_A Protein (RAB geranylger 99.9 4.5E-24 1.5E-28 233.0 13.6 136 88-234 46-191 (567)
10 2h6f_A Protein farnesyltransfe 99.8 4.3E-20 1.5E-24 192.2 14.5 161 50-235 88-248 (382)
11 2pl2_A Hypothetical conserved 99.7 2.5E-15 8.4E-20 141.3 21.3 180 31-238 12-202 (217)
12 3vtx_A MAMA; tetratricopeptide 99.7 3.1E-15 1E-19 134.3 19.9 161 34-221 15-175 (184)
13 4i17_A Hypothetical protein; T 99.6 2.1E-13 7.3E-18 126.6 21.9 186 31-231 14-224 (228)
14 4gyw_A UDP-N-acetylglucosamine 99.5 1.5E-13 5E-18 154.4 18.6 143 33-190 18-160 (723)
15 2pzi_A Probable serine/threoni 99.5 8.7E-14 3E-18 153.8 16.2 174 32-233 399-580 (681)
16 4abn_A Tetratricopeptide repea 99.5 5.1E-13 1.7E-17 141.0 20.1 175 34-235 112-306 (474)
17 3urz_A Uncharacterized protein 99.5 2.7E-13 9.3E-18 126.5 15.7 175 26-228 6-197 (208)
18 3hym_B Cell division cycle pro 99.5 9.2E-13 3.2E-17 126.0 19.0 184 27-236 25-208 (330)
19 4gyw_A UDP-N-acetylglucosamine 99.5 4.7E-13 1.6E-17 150.3 19.5 157 54-236 4-160 (723)
20 3vtx_A MAMA; tetratricopeptide 99.5 1.9E-12 6.5E-17 115.9 19.5 155 56-236 2-156 (184)
21 1w3b_A UDP-N-acetylglucosamine 99.5 2.8E-12 9.5E-17 127.9 22.7 187 34-235 77-285 (388)
22 4eqf_A PEX5-related protein; a 99.5 2.2E-12 7.4E-17 127.4 21.1 178 33-236 74-296 (365)
23 2q7f_A YRRB protein; TPR, prot 99.5 6.1E-12 2.1E-16 115.5 22.2 170 34-230 67-236 (243)
24 1w3b_A UDP-N-acetylglucosamine 99.5 3.2E-12 1.1E-16 127.5 22.0 173 36-235 45-217 (388)
25 2vq2_A PILW, putative fimbrial 99.5 1.5E-11 5E-16 111.0 22.8 175 31-232 15-193 (225)
26 2q7f_A YRRB protein; TPR, prot 99.5 2.8E-12 9.5E-17 117.8 18.3 177 33-236 32-208 (243)
27 3hym_B Cell division cycle pro 99.4 6.5E-12 2.2E-16 120.0 20.7 183 36-233 102-316 (330)
28 2ho1_A Type 4 fimbrial biogene 99.4 9.7E-12 3.3E-16 115.7 21.1 183 25-234 38-222 (252)
29 3ieg_A DNAJ homolog subfamily 99.4 8.6E-12 2.9E-16 120.0 21.3 182 27-235 6-202 (359)
30 2pl2_A Hypothetical conserved 99.4 3E-12 1E-16 120.2 17.6 154 56-236 2-166 (217)
31 3uq3_A Heat shock protein STI1 99.4 7.6E-12 2.6E-16 115.3 19.9 177 32-236 13-222 (258)
32 4gco_A Protein STI-1; structur 99.4 1.1E-12 3.7E-17 114.3 12.4 123 49-185 3-125 (126)
33 3u4t_A TPR repeat-containing p 99.4 6.4E-12 2.2E-16 118.0 17.9 176 31-235 10-190 (272)
34 1fch_A Peroxisomal targeting s 99.4 3E-11 1E-15 118.1 23.0 177 33-236 73-300 (368)
35 2y4t_A DNAJ homolog subfamily 99.4 1.1E-11 3.7E-16 125.0 20.3 184 25-235 27-225 (450)
36 4eqf_A PEX5-related protein; a 99.4 8.8E-12 3E-16 123.0 19.0 189 33-236 108-342 (365)
37 4gco_A Protein STI-1; structur 99.4 2.2E-12 7.4E-17 112.3 12.6 122 96-231 4-125 (126)
38 3uq3_A Heat shock protein STI1 99.4 1.1E-11 3.8E-16 114.2 18.0 182 32-228 46-254 (258)
39 4ga2_A E3 SUMO-protein ligase 99.4 1.1E-12 3.7E-17 116.9 10.5 140 36-189 9-148 (150)
40 3as5_A MAMA; tetratricopeptide 99.4 2.5E-11 8.7E-16 105.6 18.0 166 32-224 16-181 (186)
41 1fch_A Peroxisomal targeting s 99.4 5.1E-11 1.7E-15 116.5 22.0 190 33-237 107-346 (368)
42 3ieg_A DNAJ homolog subfamily 99.4 2E-10 6.8E-15 110.4 24.8 176 31-233 127-318 (359)
43 3u4t_A TPR repeat-containing p 99.4 2.7E-11 9.1E-16 113.7 18.2 170 36-233 86-267 (272)
44 3cv0_A Peroxisome targeting si 99.3 4.8E-11 1.6E-15 113.9 19.3 173 33-232 30-217 (327)
45 4i17_A Hypothetical protein; T 99.3 2.5E-11 8.6E-16 112.6 16.9 152 56-233 4-165 (228)
46 4abn_A Tetratricopeptide repea 99.3 2.8E-11 9.7E-16 127.7 19.2 176 42-236 85-273 (474)
47 2vsy_A XCC0866; transferase, g 99.3 2.8E-11 9.6E-16 129.0 19.0 162 37-225 2-166 (568)
48 2vq2_A PILW, putative fimbrial 99.3 1.7E-10 5.8E-15 104.0 21.2 168 33-227 51-222 (225)
49 4ga2_A E3 SUMO-protein ligase 99.3 6.2E-12 2.1E-16 112.0 11.5 137 84-234 10-147 (150)
50 2ho1_A Type 4 fimbrial biogene 99.3 1.7E-10 5.8E-15 107.3 21.7 168 33-227 80-249 (252)
51 2y4t_A DNAJ homolog subfamily 99.3 1.9E-10 6.6E-15 115.8 23.4 183 33-230 152-372 (450)
52 3qky_A Outer membrane assembly 99.3 1.4E-10 4.8E-15 110.2 21.0 182 26-224 17-232 (261)
53 3cv0_A Peroxisome targeting si 99.3 6.2E-11 2.1E-15 113.1 17.8 189 33-236 64-301 (327)
54 2xpi_A Anaphase-promoting comp 99.3 1.3E-10 4.5E-15 121.7 21.7 183 34-231 383-594 (597)
55 3fp2_A TPR repeat-containing p 99.3 2E-10 7E-15 118.1 21.7 187 34-236 253-477 (537)
56 2xpi_A Anaphase-promoting comp 99.3 2.5E-10 8.5E-15 119.6 22.2 189 33-236 348-565 (597)
57 4g1t_A Interferon-induced prot 99.3 1.4E-10 4.7E-15 118.2 18.9 190 36-236 150-349 (472)
58 2ond_A Cleavage stimulation fa 99.3 1.3E-10 4.5E-15 114.3 18.0 179 42-234 33-216 (308)
59 1xnf_A Lipoprotein NLPI; TPR, 99.3 1.1E-09 3.9E-14 102.2 23.4 187 31-233 50-261 (275)
60 1xnf_A Lipoprotein NLPI; TPR, 99.3 1.9E-10 6.6E-15 107.5 18.0 167 37-231 18-188 (275)
61 2gw1_A Mitochondrial precursor 99.2 2.2E-10 7.6E-15 116.6 19.1 182 36-232 282-494 (514)
62 2gw1_A Mitochondrial precursor 99.2 2.4E-10 8.4E-15 116.3 18.0 194 27-236 240-464 (514)
63 3gyz_A Chaperone protein IPGC; 99.2 5.1E-11 1.8E-15 108.2 11.5 126 29-175 13-138 (151)
64 3fp2_A TPR repeat-containing p 99.2 3.2E-10 1.1E-14 116.6 18.9 146 59-231 243-388 (537)
65 4g1t_A Interferon-induced prot 99.2 5.4E-10 1.9E-14 113.8 19.7 177 33-232 103-292 (472)
66 3gyz_A Chaperone protein IPGC; 99.2 3.2E-11 1.1E-15 109.6 9.4 118 90-221 21-138 (151)
67 3mkr_A Coatomer subunit epsilo 99.2 1.4E-09 4.7E-14 107.6 21.9 166 37-234 78-247 (291)
68 2ond_A Cleavage stimulation fa 99.2 6.3E-10 2.1E-14 109.4 18.9 172 36-233 69-253 (308)
69 2pzi_A Probable serine/threoni 99.2 1.6E-10 5.3E-15 127.9 15.1 140 32-187 441-580 (681)
70 2yhc_A BAMD, UPF0169 lipoprote 99.1 3.3E-09 1.1E-13 99.6 20.0 166 31-222 11-219 (225)
71 2vgx_A Chaperone SYCD; alterna 99.1 7.2E-10 2.5E-14 98.7 14.4 124 47-184 9-132 (148)
72 2vgx_A Chaperone SYCD; alterna 99.1 5.4E-10 1.8E-14 99.5 13.2 124 92-229 8-131 (148)
73 2r5s_A Uncharacterized protein 99.1 3E-10 1E-14 102.5 10.9 158 31-215 13-172 (176)
74 3mkr_A Coatomer subunit epsilo 99.1 4E-09 1.4E-13 104.3 19.9 163 33-226 110-274 (291)
75 2xcb_A PCRH, regulatory protei 99.1 6.6E-10 2.3E-14 96.9 12.1 127 46-186 5-131 (142)
76 3upv_A Heat shock protein STI1 99.1 2.3E-09 7.8E-14 90.6 14.5 118 56-187 1-124 (126)
77 1p5q_A FKBP52, FK506-binding p 99.1 6.4E-10 2.2E-14 112.2 12.8 135 42-190 130-279 (336)
78 2xcb_A PCRH, regulatory protei 99.1 5.9E-10 2E-14 97.2 10.8 125 92-230 5-129 (142)
79 3sz7_A HSC70 cochaperone (SGT) 99.0 3E-09 1E-13 94.4 14.3 116 55-184 7-122 (164)
80 3urz_A Uncharacterized protein 99.0 2.8E-09 9.5E-14 99.3 14.7 146 58-228 3-164 (208)
81 3as5_A MAMA; tetratricopeptide 99.0 6.9E-09 2.4E-13 90.1 16.2 151 59-235 8-158 (186)
82 3qou_A Protein YBBN; thioredox 99.0 3.2E-09 1.1E-13 104.2 15.5 162 27-215 120-283 (287)
83 2e2e_A Formate-dependent nitri 99.0 3.3E-09 1.1E-13 94.6 13.6 129 35-178 21-152 (177)
84 2hr2_A Hypothetical protein; a 99.0 9.2E-10 3.1E-14 102.5 9.8 106 106-225 12-140 (159)
85 2e2e_A Formate-dependent nitri 99.0 5.2E-09 1.8E-13 93.3 14.3 131 85-228 24-156 (177)
86 3upv_A Heat shock protein STI1 99.0 3.5E-09 1.2E-13 89.5 12.2 117 102-232 1-123 (126)
87 1qqe_A Vesicular transport pro 99.0 1.1E-08 3.7E-13 100.1 17.1 166 34-225 47-237 (292)
88 3sz7_A HSC70 cochaperone (SGT) 99.0 5.2E-09 1.8E-13 92.8 13.4 116 101-230 7-122 (164)
89 3qky_A Outer membrane assembly 99.0 1.6E-08 5.5E-13 95.9 17.2 157 52-234 8-198 (261)
90 1kt0_A FKBP51, 51 kDa FK506-bi 99.0 1.2E-09 4.1E-14 115.0 10.3 135 42-190 251-400 (457)
91 2r5s_A Uncharacterized protein 99.0 2.5E-09 8.6E-14 96.4 11.0 155 55-236 2-159 (176)
92 3qou_A Protein YBBN; thioredox 99.0 1.8E-08 6.1E-13 98.9 17.7 160 51-236 109-270 (287)
93 2hr2_A Hypothetical protein; a 99.0 2.9E-09 9.9E-14 99.2 11.3 112 59-184 11-145 (159)
94 2fo7_A Synthetic consensus TPR 98.9 5.6E-08 1.9E-12 79.4 17.1 135 60-220 2-136 (136)
95 2ooe_A Cleavage stimulation fa 98.9 1.9E-08 6.5E-13 106.0 17.8 173 42-233 255-437 (530)
96 2lni_A Stress-induced-phosphop 98.9 2E-08 6.8E-13 83.3 13.9 121 54-188 11-131 (133)
97 2fo7_A Synthetic consensus TPR 98.9 9E-08 3.1E-12 78.2 17.3 125 35-174 12-136 (136)
98 1p5q_A FKBP52, FK506-binding p 98.9 3.4E-08 1.2E-12 99.5 17.6 124 31-168 154-292 (336)
99 1a17_A Serine/threonine protei 98.9 1E-07 3.5E-12 82.2 17.9 126 27-167 16-143 (166)
100 2c2l_A CHIP, carboxy terminus 98.9 1.9E-08 6.4E-13 98.6 14.6 165 31-227 11-175 (281)
101 2vyi_A SGTA protein; chaperone 98.9 3.6E-08 1.2E-12 80.8 14.0 124 53-190 6-129 (131)
102 2vyi_A SGTA protein; chaperone 98.9 9.9E-08 3.4E-12 78.1 16.5 116 27-156 15-130 (131)
103 2ooe_A Cleavage stimulation fa 98.9 8.3E-08 2.8E-12 101.1 20.2 168 37-230 292-473 (530)
104 1a17_A Serine/threonine protei 98.9 1.7E-07 5.6E-12 80.9 18.4 133 59-215 13-145 (166)
105 2vsy_A XCC0866; transferase, g 98.9 3.8E-08 1.3E-12 104.8 16.6 136 32-182 31-169 (568)
106 2lni_A Stress-induced-phosphop 98.8 9.4E-08 3.2E-12 79.2 15.4 110 31-154 23-132 (133)
107 1hh8_A P67PHOX, NCF-2, neutrop 98.8 1.1E-07 3.8E-12 86.3 16.9 128 31-176 13-156 (213)
108 1hh8_A P67PHOX, NCF-2, neutrop 98.8 1.4E-07 4.7E-12 85.7 17.1 135 61-224 8-158 (213)
109 2yhc_A BAMD, UPF0169 lipoprote 98.8 1.6E-07 5.5E-12 87.9 18.0 165 58-236 3-199 (225)
110 3q49_B STIP1 homology and U bo 98.8 1E-07 3.4E-12 80.5 14.9 120 53-186 3-127 (137)
111 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 4.2E-08 1.4E-12 103.2 15.2 118 29-160 273-405 (457)
112 3rkv_A Putative peptidylprolyl 98.8 5.9E-08 2E-12 85.8 13.5 97 30-140 17-131 (162)
113 3rkv_A Putative peptidylprolyl 98.8 7E-08 2.4E-12 85.3 13.8 119 58-190 10-147 (162)
114 3q49_B STIP1 homology and U bo 98.8 5.5E-08 1.9E-12 82.1 12.5 120 99-232 3-127 (137)
115 2dba_A Smooth muscle cell asso 98.8 1.4E-07 4.6E-12 79.9 14.5 121 99-233 22-145 (148)
116 3nf1_A KLC 1, kinesin light ch 98.8 9.8E-08 3.3E-12 90.2 14.6 177 28-231 31-248 (311)
117 1elw_A TPR1-domain of HOP; HOP 98.8 2.6E-07 8.8E-12 74.4 14.7 99 35-147 15-113 (118)
118 2if4_A ATFKBP42; FKBP-like, al 98.8 3.8E-08 1.3E-12 99.4 11.8 133 29-175 184-333 (338)
119 1elw_A TPR1-domain of HOP; HOP 98.7 2.6E-07 8.8E-12 74.4 14.4 114 58-185 3-116 (118)
120 2fbn_A 70 kDa peptidylprolyl i 98.7 3.7E-08 1.3E-12 89.9 10.5 126 51-190 30-171 (198)
121 2kck_A TPR repeat; tetratricop 98.7 6.8E-08 2.3E-12 77.4 10.8 108 100-221 1-111 (112)
122 1wao_1 Serine/threonine protei 98.7 2.7E-08 9.2E-13 105.7 10.8 132 35-181 17-161 (477)
123 2kck_A TPR repeat; tetratricop 98.7 6.4E-08 2.2E-12 77.5 10.6 108 54-175 1-111 (112)
124 3nf1_A KLC 1, kinesin light ch 98.7 1.7E-07 5.8E-12 88.5 15.2 160 33-219 78-310 (311)
125 4a1s_A PINS, partner of inscut 98.7 1.2E-07 4.2E-12 94.3 14.8 183 25-234 49-276 (411)
126 2dba_A Smooth muscle cell asso 98.7 2.8E-07 9.6E-12 77.9 14.9 118 53-184 22-142 (148)
127 1hxi_A PEX5, peroxisome target 98.7 1.2E-07 4.1E-12 81.4 12.6 102 106-221 18-119 (121)
128 2fbn_A 70 kDa peptidylprolyl i 98.7 1.8E-07 6.2E-12 85.3 14.5 118 24-155 38-171 (198)
129 1na0_A Designed protein CTPR3; 98.7 5.6E-07 1.9E-11 72.9 15.9 120 54-187 3-123 (125)
130 3edt_B KLC 2, kinesin light ch 98.7 1.6E-07 5.6E-12 86.9 14.2 169 37-232 14-223 (283)
131 1qqe_A Vesicular transport pro 98.7 6.5E-08 2.2E-12 94.6 12.1 174 33-226 86-279 (292)
132 1hxi_A PEX5, peroxisome target 98.7 7.6E-08 2.6E-12 82.7 10.9 85 87-173 33-117 (121)
133 3edt_B KLC 2, kinesin light ch 98.7 4.2E-07 1.4E-11 84.1 16.1 123 33-170 52-198 (283)
134 1ouv_A Conserved hypothetical 98.7 2.6E-06 8.9E-11 80.8 21.5 164 42-233 59-230 (273)
135 2if4_A ATFKBP42; FKBP-like, al 98.7 1.7E-08 5.9E-13 101.9 6.5 144 53-221 173-333 (338)
136 3sf4_A G-protein-signaling mod 98.7 2.4E-07 8.2E-12 90.9 14.3 175 33-234 18-240 (406)
137 4gcn_A Protein STI-1; structur 98.6 2.5E-07 8.6E-12 79.9 11.6 110 105-221 8-117 (127)
138 4gcn_A Protein STI-1; structur 98.6 1.9E-07 6.6E-12 80.6 10.6 105 56-174 5-116 (127)
139 1na0_A Designed protein CTPR3; 98.6 2.2E-06 7.7E-11 69.3 16.4 108 32-153 17-124 (125)
140 1zu2_A Mitochondrial import re 98.6 1.5E-07 5E-12 87.6 10.5 97 42-140 19-125 (158)
141 1zu2_A Mitochondrial import re 98.6 1.9E-07 6.5E-12 86.8 11.2 116 85-227 16-131 (158)
142 1wao_1 Serine/threonine protei 98.6 1.1E-07 3.7E-12 101.0 10.4 126 85-224 20-158 (477)
143 3ro2_A PINS homolog, G-protein 98.6 5.8E-07 2E-11 84.7 13.9 175 33-234 14-236 (338)
144 2c2l_A CHIP, carboxy terminus 98.6 5.6E-07 1.9E-11 88.0 14.2 147 56-231 1-147 (281)
145 1ouv_A Conserved hypothetical 98.6 1.1E-05 3.8E-10 76.4 22.6 161 36-233 18-194 (273)
146 3ulq_A Response regulator aspa 98.6 1.2E-06 4.1E-11 87.7 16.0 157 34-217 113-294 (383)
147 1ihg_A Cyclophilin 40; ppiase 98.5 3.9E-07 1.3E-11 93.7 12.3 114 28-155 227-356 (370)
148 4f3v_A ESX-1 secretion system 98.5 1.8E-07 6.2E-12 94.4 9.4 186 21-225 4-245 (282)
149 2qfc_A PLCR protein; TPR, HTH, 98.5 1.3E-05 4.3E-10 77.9 22.1 168 22-216 73-266 (293)
150 3k9i_A BH0479 protein; putativ 98.5 2E-07 7E-12 78.4 8.0 100 37-150 3-105 (117)
151 2xev_A YBGF; tetratricopeptide 98.5 3.3E-06 1.1E-10 70.3 15.4 105 33-151 11-121 (129)
152 1elr_A TPR2A-domain of HOP; HO 98.5 2.5E-06 8.6E-11 69.8 13.3 119 56-189 1-126 (131)
153 3u3w_A Transcriptional activat 98.5 4.8E-06 1.6E-10 80.8 17.2 167 26-216 77-266 (293)
154 2ifu_A Gamma-SNAP; membrane fu 98.5 2.2E-06 7.5E-11 84.3 14.6 162 34-224 46-231 (307)
155 3k9i_A BH0479 protein; putativ 98.4 2.5E-07 8.5E-12 77.8 6.6 93 86-180 5-100 (117)
156 1ihg_A Cyclophilin 40; ppiase 98.4 1.9E-06 6.4E-11 88.7 13.6 118 59-190 223-356 (370)
157 3sf4_A G-protein-signaling mod 98.4 2.5E-06 8.4E-11 83.7 13.6 173 33-220 96-300 (406)
158 4a1s_A PINS, partner of inscut 98.4 7.2E-07 2.5E-11 88.8 9.7 159 35-220 97-296 (411)
159 1elr_A TPR2A-domain of HOP; HO 98.4 8.3E-06 2.8E-10 66.7 14.0 106 33-153 13-125 (131)
160 2xev_A YBGF; tetratricopeptide 98.4 8.4E-06 2.9E-10 67.8 14.3 109 62-184 5-119 (129)
161 3ro2_A PINS homolog, G-protein 98.3 2E-06 6.7E-11 81.0 10.6 161 33-220 52-256 (338)
162 2kat_A Uncharacterized protein 98.3 5.2E-06 1.8E-10 68.9 10.7 99 89-189 3-103 (115)
163 2kat_A Uncharacterized protein 98.2 7.6E-06 2.6E-10 67.9 10.7 86 43-141 3-88 (115)
164 3q15_A PSP28, response regulat 98.2 4.1E-05 1.4E-09 76.6 17.3 159 34-219 111-293 (378)
165 1na3_A Designed protein CTPR2; 98.1 4.4E-05 1.5E-09 59.4 11.4 82 58-152 8-89 (91)
166 2l6j_A TPR repeat-containing p 98.1 3.3E-05 1.1E-09 62.2 11.0 52 87-139 20-71 (111)
167 2kc7_A BFR218_protein; tetratr 98.0 1E-05 3.6E-10 64.9 7.1 83 35-139 11-94 (99)
168 2l6j_A TPR repeat-containing p 98.0 3.8E-05 1.3E-09 61.9 10.4 85 104-190 3-93 (111)
169 3gw4_A Uncharacterized protein 98.0 7.6E-05 2.6E-09 66.3 13.2 162 35-224 3-184 (203)
170 3ulq_A Response regulator aspa 98.0 5.3E-05 1.8E-09 75.6 13.5 149 61-235 105-278 (383)
171 1na3_A Designed protein CTPR2; 98.0 4.5E-05 1.5E-09 59.3 10.1 84 103-188 7-90 (91)
172 2qfc_A PLCR protein; TPR, HTH, 97.9 0.00031 1.1E-08 68.0 16.4 137 85-235 89-250 (293)
173 3ma5_A Tetratricopeptide repea 97.9 3.4E-05 1.2E-09 63.4 8.1 70 55-137 3-72 (100)
174 2kc7_A BFR218_protein; tetratr 97.9 4.9E-05 1.7E-09 60.9 8.6 81 86-176 15-96 (99)
175 3ma5_A Tetratricopeptide repea 97.9 4.4E-05 1.5E-09 62.8 8.3 76 100-177 2-77 (100)
176 3rjv_A Putative SEL1 repeat pr 97.9 0.0002 6.7E-09 66.7 13.6 164 42-233 3-174 (212)
177 2ifu_A Gamma-SNAP; membrane fu 97.9 5.6E-05 1.9E-09 74.2 10.3 144 37-222 29-190 (307)
178 3u3w_A Transcriptional activat 97.7 0.00034 1.2E-08 67.6 12.8 121 36-170 127-266 (293)
179 3rjv_A Putative SEL1 repeat pr 97.6 0.0028 9.6E-08 58.8 17.2 161 36-218 30-199 (212)
180 3ro3_A PINS homolog, G-protein 97.6 0.0012 4E-08 55.1 12.6 133 60-218 10-160 (164)
181 1hz4_A MALT regulatory protein 97.5 0.0023 7.9E-08 63.0 15.5 157 35-218 25-205 (373)
182 3ro3_A PINS homolog, G-protein 97.5 0.0018 6E-08 54.0 12.4 124 34-172 19-160 (164)
183 2xm6_A Protein corresponding t 97.4 0.0026 9E-08 66.0 16.2 167 38-229 273-448 (490)
184 3ly7_A Transcriptional activat 97.4 0.0039 1.3E-07 65.1 17.3 162 48-233 183-355 (372)
185 3q15_A PSP28, response regulat 97.4 0.0011 3.9E-08 66.1 12.2 151 60-236 102-276 (378)
186 4f3v_A ESX-1 secretion system 97.3 0.00064 2.2E-08 68.5 9.5 132 30-178 108-244 (282)
187 2xm6_A Protein corresponding t 97.3 0.012 4.2E-07 60.9 18.9 167 42-234 240-412 (490)
188 3e4b_A ALGK; tetratricopeptide 97.2 0.0075 2.5E-07 62.9 16.7 162 44-234 164-331 (452)
189 3e4b_A ALGK; tetratricopeptide 97.2 0.009 3.1E-07 62.2 17.2 170 39-236 194-369 (452)
190 3ly7_A Transcriptional activat 97.1 0.0028 9.7E-08 66.2 12.0 129 42-175 216-344 (372)
191 3gw4_A Uncharacterized protein 97.1 0.0041 1.4E-07 54.9 11.4 131 32-177 34-183 (203)
192 1hz4_A MALT regulatory protein 96.8 0.042 1.4E-06 53.9 16.5 160 34-220 63-248 (373)
193 4e6h_A MRNA 3'-END-processing 96.7 0.028 9.7E-07 62.8 16.4 165 42-231 326-515 (679)
194 1xi4_A Clathrin heavy chain; a 96.5 0.085 2.9E-06 63.7 19.3 170 32-234 1113-1327(1630)
195 1xi4_A Clathrin heavy chain; a 96.4 0.074 2.5E-06 64.1 18.0 139 56-225 1102-1254(1630)
196 3bee_A Putative YFRE protein; 96.2 0.021 7.2E-07 47.4 8.8 74 55-138 2-75 (93)
197 4b4t_Q 26S proteasome regulato 96.2 0.059 2E-06 53.6 13.6 162 33-220 13-208 (434)
198 3mv2_B Coatomer subunit epsilo 96.1 0.064 2.2E-06 54.6 13.6 157 36-224 112-290 (310)
199 1pc2_A Mitochondria fission pr 95.8 0.11 3.7E-06 47.8 12.5 102 88-190 15-120 (152)
200 3bee_A Putative YFRE protein; 95.8 0.095 3.3E-06 43.3 10.9 64 29-104 13-76 (93)
201 4e6h_A MRNA 3'-END-processing 95.7 0.29 9.9E-06 54.6 17.7 164 37-226 356-546 (679)
202 1pc2_A Mitochondria fission pr 95.5 0.13 4.5E-06 47.3 11.7 65 85-150 49-115 (152)
203 3u64_A Protein TP_0956; tetrat 95.4 0.38 1.3E-05 48.9 15.6 125 48-174 141-273 (301)
204 3qww_A SET and MYND domain-con 94.7 0.22 7.7E-06 52.5 12.5 102 23-138 297-414 (433)
205 1klx_A Cysteine rich protein B 94.7 0.7 2.4E-05 39.9 13.5 117 83-217 7-127 (138)
206 3mv2_B Coatomer subunit epsilo 94.6 0.3 1E-05 49.6 12.5 154 44-226 85-260 (310)
207 3n71_A Histone lysine methyltr 94.0 0.35 1.2E-05 51.8 12.2 104 20-137 305-424 (490)
208 4b4t_Q 26S proteasome regulato 93.9 0.58 2E-05 46.4 12.8 166 35-216 66-245 (434)
209 3u64_A Protein TP_0956; tetrat 93.5 0.33 1.1E-05 49.3 10.3 91 42-139 180-273 (301)
210 1b89_A Protein (clathrin heavy 93.5 0.099 3.4E-06 55.9 6.8 127 87-234 164-295 (449)
211 1klx_A Cysteine rich protein B 92.7 2.8 9.7E-05 35.9 13.8 109 42-171 12-127 (138)
212 2v5f_A Prolyl 4-hydroxylase su 92.6 0.69 2.4E-05 38.0 9.3 70 33-115 14-90 (104)
213 1b89_A Protein (clathrin heavy 91.4 0.45 1.5E-05 50.9 8.4 116 104-234 121-254 (449)
214 3qwp_A SET and MYND domain-con 90.8 0.86 3E-05 47.7 9.9 99 24-136 287-401 (429)
215 2v5f_A Prolyl 4-hydroxylase su 90.7 1.3 4.3E-05 36.4 8.9 63 86-149 20-89 (104)
216 2uy1_A Cleavage stimulation fa 88.7 17 0.00058 38.3 18.0 56 161-229 199-254 (493)
217 2uy1_A Cleavage stimulation fa 85.3 40 0.0014 35.4 18.6 124 42-179 196-358 (493)
218 1nzn_A CGI-135 protein, fissio 82.8 11 0.00036 33.5 10.6 63 86-149 53-117 (126)
219 3o48_A Mitochondria fission 1 80.8 22 0.00077 31.8 12.1 63 85-148 57-120 (134)
220 1y8m_A FIS1; mitochondria, unk 77.3 42 0.0014 30.4 13.3 62 85-147 56-118 (144)
221 3qww_A SET and MYND domain-con 75.2 5.6 0.00019 41.8 7.5 83 120-215 312-410 (433)
222 1nzn_A CGI-135 protein, fissio 75.0 17 0.00058 32.2 9.4 96 92-188 22-121 (126)
223 1y8m_A FIS1; mitochondria, unk 65.8 78 0.0027 28.6 11.9 102 88-190 19-126 (144)
224 3n71_A Histone lysine methyltr 61.4 27 0.00094 37.1 9.4 84 85-170 323-422 (490)
225 3o48_A Mitochondria fission 1 58.3 42 0.0014 30.1 8.5 78 29-118 45-125 (134)
226 3qwp_A SET and MYND domain-con 50.6 38 0.0013 35.2 8.1 83 120-215 301-399 (429)
227 1sky_E F1-ATPase, F1-ATP synth 31.0 12 0.00041 40.2 0.5 75 438-512 142-255 (473)
228 4gns_B Protein CSD3, chitin bi 29.5 3.1E+02 0.011 30.9 11.7 120 27-161 250-391 (754)
229 4hu2_A Probable conserved lipo 27.7 87 0.003 29.7 5.8 81 278-372 115-197 (198)
No 1
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=100.00 E-value=1.1e-56 Score=490.18 Aligned_cols=422 Identities=30% Similarity=0.495 Sum_probs=332.5
Q ss_pred CCCCcCC-CCChHHHHHH---HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCC
Q 009766 1 MHGRPRK-PLKPEDAAAS---AAKAEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTEN 76 (526)
Q Consensus 1 mhgr~~~-~~~~e~~~~~---~~~~ek~r~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~ 76 (526)
||||+|+ ++++++++|+ .+|.+.|+.++++|++.+..|+|+++||++++++|.+||++|+|||+||.++..++.
T Consensus 1 mhg~~~~~~~~~~~~~~~~~~~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~-- 78 (567)
T 1dce_A 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLET-- 78 (567)
T ss_dssp CCSCBCSSCSTTSSCCSCCCCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT--
T ss_pred CCCCCcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhccc--
Confidence 9999998 5555555444 568888899999999999999999999999999999999999999999999999974
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCC-CChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCc
Q 009766 77 DSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGH-SSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNR 155 (526)
Q Consensus 77 ~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~-~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~ 155 (526)
..+++.....+++||++++++|+.|||+|+||+||+|++.+++ ..+++|+++|++++++||+|||||+||+|++..++.
T Consensus 79 ~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~ 158 (567)
T 1dce_A 79 EKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAV 158 (567)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCC
T ss_pred ccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCC
Confidence 2234555677999999999999999999999999999999984 256999999999999999999999999999999995
Q ss_pred ChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCc--cchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 156 SEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGF--VSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 156 ~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~--~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
..++|+++++++|+.||+|+|||+||+.++..+......+. ....+.+++|++++++||+++|+|+|+|+|++|++.+
T Consensus 159 ~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~ 238 (567)
T 1dce_A 159 APAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGR 238 (567)
T ss_dssp CHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSC
T ss_pred ChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhc
Confidence 55799999999999999999999999999999865422211 1234678999999999999999999999999999999
Q ss_pred ccCCCCCcccccCCCCCCcceecCCccccCCCCCCcccccCCCCCcceeEeeccccccccc-cceEEecccCcCccceee
Q 009766 234 TVRVDSPQLVSSWPTPGSDLILLGDRCLDGCASSPFTRFHLDSRTFPLVLYFNQAVEGVNS-STITVDSELNTNKDLVWK 312 (526)
Q Consensus 234 ~~~~e~~~~~~~w~~~~~~~~l~~~~~l~~~~~s~~~~~~~~~~~~~~~~~f~~~v~~~~~-~~~~~~~~~~~~~~~~w~ 312 (526)
+.+.+ .+.| + |++ ....++|++|++||..-.. +|+.+.+... ...++|+
T Consensus 239 ~~~~~---~~~~---------------~----------~~~-~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~-~~~~~W~ 288 (567)
T 1dce_A 239 AEPHD---VLCC---------------V----------HVS-REEACLSVCFSRPLTVGSRMGTLLLMVDEA-PLSVEWR 288 (567)
T ss_dssp CCCCS---CEEE---------------E----------EEE-TTTTEEEEEEEEEECTTBTTBCEEEEESSS-EECCCCB
T ss_pred CCCcc---ceee---------------e----------eec-cCCceEEEEeccceeccccccceEEeecCc-ccceeec
Confidence 75422 2211 1 122 3577799999999985433 2488888754 5799999
Q ss_pred eCCCCCCccceeEEEeccCCCCCCCCCccceEEEecCcccccccCCCcccCCCcceEEEEEEeecccccccccccceeec
Q 009766 313 PLSSCNSKAAQVWVTQLNLPDGNTHSSKVFPVEVSLGHSQGIISSSGFHYSNPFCFAFRVSLQFVETQPVEALGKEIISW 392 (526)
Q Consensus 313 p~~~~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (526)
|+. .++++++||+++++.++...+ ..+|+|+|.+++.++ |..|. +.+ +. .-.|
T Consensus 289 ~~~-~~~~~~~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~----------~~~---~~-------~~~~ 341 (567)
T 1dce_A 289 TPD-GRNRPSHVWLCDLPAASLNDQ-LPQHTFRVIWTGSDS-----QKECV----------LLK---DR-------PECW 341 (567)
T ss_dssp CTT-SSCCSEEEEEEECCGGGTSTT-SSEEEEEEEETTTTE-----EEEEE----------EET---TC-------SEEE
T ss_pred cCC-cccccceeEEeecCccccccc-cccceEEEeeccCCC-----Ccccc----------ccC---CC-------chhh
Confidence 998 678899999999998765444 568999999987664 33333 111 11 1223
Q ss_pred cCCCccccccccCCCCCcccccccccccCCccchhhhhHHHHHHHHHHHHhhhh-ccccchhHHHHHHHHHHHhhhcCCC
Q 009766 393 RDESFHNYNAHSQDSSPISSLYQLSIKNDNELTDFEWRAATIAKEIDHFRELLS-LINCKIGKLTLARLLMAHDAMMCPP 471 (526)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (526)
-. + +-..+++..+| +. .=+.+.|-.||..+..|.. .-++++.-++++.++.+++.
T Consensus 342 ~~-d-------~~~~~~L~~L~---Ls--------~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~----- 397 (567)
T 1dce_A 342 CR-D-------SATDEQLFRCE---LS--------VEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDP----- 397 (567)
T ss_dssp EE-C-------CSTTTTSSSCC---CC--------HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCT-----
T ss_pred hc-c-------cccCccceecc---CC--------hhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhccc-----
Confidence 21 0 11122222222 11 1167789999999988866 34788889999988887653
Q ss_pred CCCCcchHHHHHHHHHhhccCcchhhhhhchhhhhhh
Q 009766 472 ANKISHSEEVLELYNDLMRLDPTHVQYYKDQHSLVLL 508 (526)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (526)
.+...++++.++.|..|||....++++=.++.+.
T Consensus 398 ---~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~ 431 (567)
T 1dce_A 398 ---LLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLL 431 (567)
T ss_dssp ---GGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred ---ccCCHHHHHHHHhcccCcchhhcccchhhhhhhh
Confidence 3567899999999999999888888877765543
No 2
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=100.00 E-value=3.1e-53 Score=437.18 Aligned_cols=315 Identities=37% Similarity=0.619 Sum_probs=256.8
Q ss_pred CCCCcCC-CCChHHHHHHHH---HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCC
Q 009766 1 MHGRPRK-PLKPEDAAASAA---KAEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTEN 76 (526)
Q Consensus 1 mhgr~~~-~~~~e~~~~~~~---~~ek~r~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~ 76 (526)
||||+|+ +++++.++++++ |.+.|+.+++.+++++++|+|+++||++++++|.+||++|||||+||.+|..++.
T Consensus 2 mhg~~r~~~~~~~~~~~~~~~~~ki~~y~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~-- 79 (331)
T 3dss_A 2 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLET-- 79 (331)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHH--
T ss_pred CCCCcCCCCcHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcc--
Confidence 9999999 555444444443 6677788889999999999999999999999999999999999999999999874
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCc
Q 009766 77 DSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHS-SIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNR 155 (526)
Q Consensus 77 ~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~-~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~ 155 (526)
..+|+.....+++||.+++.+|..|||||++|+||+|++..++. .+++|+++|++++++||+|||||+||+|++..++.
T Consensus 80 ~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~ 159 (331)
T 3dss_A 80 EKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAV 159 (331)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCc
Confidence 22344455679999999999999999999999999999999863 48999999999999999999999999999999998
Q ss_pred ChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhcc--CccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 156 SEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVE--GFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 156 ~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~--g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
+.++||++++++|+.||+|+|||+||++++..+...... ......+++++|++++++||+++|+|+|+|+|++|++.+
T Consensus 160 ~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~ 239 (331)
T 3dss_A 160 APAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGA 239 (331)
T ss_dssp CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 767999999999999999999999999999998542211 011234679999999999999999999999999999965
Q ss_pred ccCCCCCcccccCCCCCCcceecCCccccCCCCCCcccccCCCCCcceeEeeccccccccccceEEecccCcCccceeee
Q 009766 234 TVRVDSPQLVSSWPTPGSDLILLGDRCLDGCASSPFTRFHLDSRTFPLVLYFNQAVEGVNSSTITVDSELNTNKDLVWKP 313 (526)
Q Consensus 234 ~~~~e~~~~~~~w~~~~~~~~l~~~~~l~~~~~s~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~~~~~~~w~p 313 (526)
.
T Consensus 240 ~------------------------------------------------------------------------------- 240 (331)
T 3dss_A 240 G------------------------------------------------------------------------------- 240 (331)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred CCCCCCccceeEEEeccCCCCCCCCCccceEEEecCcccccccCCCcccCCCcceEEEEEEeecccccccccccceeecc
Q 009766 314 LSSCNSKAAQVWVTQLNLPDGNTHSSKVFPVEVSLGHSQGIISSSGFHYSNPFCFAFRVSLQFVETQPVEALGKEIISWR 393 (526)
Q Consensus 314 ~~~~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (526)
.| .
T Consensus 241 --------------------------------------------~~---------------------------------~ 243 (331)
T 3dss_A 241 --------------------------------------------SG---------------------------------R 243 (331)
T ss_dssp --------------------------------------------SC---------------------------------G
T ss_pred --------------------------------------------cC---------------------------------c
Confidence 00 0
Q ss_pred CCCccccccccCCCCCcccccccccccCCccchhhhhHHHHHHHHHHHHhhhh-ccccchhHHHHHHHHHHHhhhcCCCC
Q 009766 394 DESFHNYNAHSQDSSPISSLYQLSIKNDNELTDFEWRAATIAKEIDHFRELLS-LINCKIGKLTLARLLMAHDAMMCPPA 472 (526)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (526)
. + .+.+ ..+.+.+||+.+++|+. +.|||+.=+++|-++.+.+
T Consensus 244 -------~----~----~~~~---------------~~~~l~~el~~~~elle~~pd~~w~l~~~~~~~~~~~------- 286 (331)
T 3dss_A 244 -------C----E----LSVE---------------KSTVLQSELESCKELQELEPENKWCLLTIILLMRALD------- 286 (331)
T ss_dssp -------G----G----CCHH---------------HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC-------
T ss_pred -------c----c----cchH---------------HHHHHHHHHHHHHHHHhhCcccchHHHHHHHHHHhhc-------
Confidence 0 0 0011 57889999999999988 8899999999987765554
Q ss_pred CCCcchHHHHHHHHHhhccCcchhhhhhchhhhhhhhhh
Q 009766 473 NKISHSEEVLELYNDLMRLDPTHVQYYKDQHSLVLLQQV 511 (526)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (526)
..++.+|++..+..|++|||.++.||.|-.|..+++..
T Consensus 287 -~~~~~~~~~~~l~~l~~~Dp~r~~~y~d~~~~~~~~~~ 324 (331)
T 3dss_A 287 -PLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENS 324 (331)
T ss_dssp -TTTTHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred -ccccHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHH
Confidence 24578899999999999999999999998887776643
No 3
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=100.00 E-value=9.5e-47 Score=391.43 Aligned_cols=230 Identities=24% Similarity=0.364 Sum_probs=210.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHH
Q 009766 10 KPEDAAASAAKAEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDE 89 (526)
Q Consensus 10 ~~e~~~~~~~~~ek~r~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~e 89 (526)
.++.++++|+|.++|+.+++.+++.+.+++++++||++++++|.+||++||+||+||.+|..++. .+++
T Consensus 39 ~~~~~~~~i~y~~~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~-----------~l~e 107 (349)
T 3q7a_A 39 DGPNPVVPIMYSEEYKDAMDYFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNK-----------SLED 107 (349)
T ss_dssp CCSSCSSCBCCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----------CHHH
T ss_pred CCCCCeeeeeeCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhh-----------hHHH
Confidence 44578999999999999999999999999999999999999999999999999999999999862 5899
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcCh-------HHHH
Q 009766 90 ELRVVESALRQNFKSYGAWHHRKWILSKGHS-SIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSE-------EDEL 161 (526)
Q Consensus 90 EL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~-~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~-------eeEL 161 (526)
||++++.+|..|||||++|+||+|++.++.+ .+++||++|+++|++||||||||+||+|++..++.+. ++||
T Consensus 108 EL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eEL 187 (349)
T 3q7a_A 108 ELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSEL 187 (349)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHH
Confidence 9999999999999999999999999998733 7899999999999999999999999999999999875 4899
Q ss_pred HHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccccCCCCCc
Q 009766 162 KYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVRVDSPQ 241 (526)
Q Consensus 162 e~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~~~e~~~ 241 (526)
++++++|+.||+|+|||+||++++.+++.. .....++++|+++++++|+++|+|+|+|+|++||+.+..+...|+
T Consensus 188 e~~~k~I~~dp~N~SAW~~R~~lL~~l~~~-----~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~~~~~~ 262 (349)
T 3q7a_A 188 DWCNEMLRVDGRNNSAWGWRWYLRVSRPGA-----ETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFSLPLVPI 262 (349)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHTTSTTC-----CCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCSGGG
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhcccc-----ccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCcccc
Confidence 999999999999999999999999998642 123467899999999999999999999999999999998888899
Q ss_pred ccccCCCCCCccee
Q 009766 242 LVSSWPTPGSDLIL 255 (526)
Q Consensus 242 ~~~~w~~~~~~~~l 255 (526)
+.++||++|+.|.+
T Consensus 263 ~~~~~~~~~~~~~~ 276 (349)
T 3q7a_A 263 LPAILPYTASKLNP 276 (349)
T ss_dssp HHHHGGGTC-----
T ss_pred cccccccccccccc
Confidence 99999999999865
No 4
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=100.00 E-value=6.5e-44 Score=363.39 Aligned_cols=211 Identities=23% Similarity=0.407 Sum_probs=194.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHH
Q 009766 10 KPEDAAASAAKAEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDE 89 (526)
Q Consensus 10 ~~e~~~~~~~~~ek~r~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~e 89 (526)
.++.+.++|+|+++|+.++++|++.+++|+|+++||++|+++|.+||++|||||+||.+|..++. ..+++
T Consensus 18 ~~~~~~~~i~y~~~y~~~~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~----------~~~~e 87 (306)
T 3dra_A 18 TEEPQICQILYDEDYKQIMGLLLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPN----------RNLYD 87 (306)
T ss_dssp CSSCCTTCCCCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTT----------SCHHH
T ss_pred CCCCCceeeeeCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHccc----------ccHHH
Confidence 55688999999999999999999999999999999999999999999999999999999999871 25899
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHH----HhCC--CChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcCh-HHHHH
Q 009766 90 ELRVVESALRQNFKSYGAWHHRKWIL----SKGH--SSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSE-EDELK 162 (526)
Q Consensus 90 EL~~~e~aL~~NPKsy~AW~HRrwvL----~kl~--~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~-eeELe 162 (526)
||++++.+|..|||+|++|+||+|++ ..++ ..+++|+++|++++++||||||||+||+|++..++.+. ++||+
T Consensus 88 eL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~ 167 (306)
T 3dra_A 88 ELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELS 167 (306)
T ss_dssp HHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHH
Confidence 99999999999999999999999999 6552 47899999999999999999999999999999999873 48999
Q ss_pred HHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccccC
Q 009766 163 YTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 163 ~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
+++++|+.||+|+|||+||++++.+++.. ...+++++|+++++++|+++|+|+|+|+|+++++.+..+
T Consensus 168 ~~~~~i~~d~~N~sAW~~R~~ll~~l~~~------~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 168 FVDKVIDTDLKNNSAWSHRFFLLFSKKHL------ATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHSSGGG------CCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhcccc------chhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC
Confidence 99999999999999999999999988642 124568999999999999999999999999999988654
No 5
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.97 E-value=3.5e-31 Score=269.56 Aligned_cols=188 Identities=22% Similarity=0.338 Sum_probs=158.1
Q ss_pred CCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhC
Q 009766 39 IYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKG 118 (526)
Q Consensus 39 eyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl 118 (526)
.+ +++|++++.+|.+||++|++||||+++|.++...... ...+++||++++++|..|||||+||+||+|++.++
T Consensus 84 ~~-~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~-----~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l 157 (306)
T 3dra_A 84 NL-YDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNN-----DFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTF 157 (306)
T ss_dssp CH-HHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTT-----CCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred cH-HHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccc-----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 56 8999999999999999999999999999554310000 02579999999999999999999999999999998
Q ss_pred CCChH--HHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcC-----hHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhh
Q 009766 119 HSSID--NELRLLDKFQKADSRNFHAWNYRRFVAASMNRS-----EEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKR 191 (526)
Q Consensus 119 ~~~~e--eELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~-----~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~ 191 (526)
+ .++ +|+++++++++.||+|||||+||+|++..++.. .++||++++++|..+|+|+|||+||++++..+++.
T Consensus 158 ~-~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~ 236 (306)
T 3dra_A 158 D-LHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRS 236 (306)
T ss_dssp T-CTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCC
T ss_pred c-ccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCC
Confidence 5 777 999999999999999999999999999999861 36899999999999999999999999999998763
Q ss_pred hc------cCc---c-----------------chhhhHHHHHHHHHHHHH-hCCCCcccHHHHHHHHcc
Q 009766 192 KV------EGF---V-----------------SKEKVLPDEYEFVHQAIF-TDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 192 ~~------~g~---~-----------------~~~eileeELe~v~~AI~-~dP~DeSaW~Y~r~LL~~ 233 (526)
.. ..+ . ...+-+++++++++.++. .||-+...|.|++..|..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~~~~Dpir~~yW~~~~~~l~~ 305 (306)
T 3dra_A 237 ITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQKKYNESRTVYDLLKSKYNPIRSNFWDYQISKLTS 305 (306)
T ss_dssp GGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCGGGHHHHHHHHHTCC-
T ss_pred hHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHhccChHHHHHHHHHHhhccc
Confidence 11 000 0 011234789999999997 799999999999887653
No 6
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.96 E-value=2.9e-29 Score=258.64 Aligned_cols=176 Identities=20% Similarity=0.367 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCC
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSS 121 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~ 121 (526)
+++|.+++.+|..||++|++|+||++++..++. ..+++||.+++++|..+|+||+||+||+|++..++..
T Consensus 91 ~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~----------~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~ 160 (331)
T 3dss_A 91 KAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE----------PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVA 160 (331)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSS----------CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCc----------ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcC
Confidence 689999999999999999999999999999863 1489999999999999999999999999999998634
Q ss_pred hHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhC--------------cChHHHHHHHHHHHHhccCChhHHHHHHHHHHH
Q 009766 122 IDNELRLLDKFQKADSRNFHAWNYRRFVAASMN--------------RSEEDELKYTEDMICNNFSNYSAWHNRSLLLSN 187 (526)
Q Consensus 122 ~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg--------------~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~ 187 (526)
+++|+++++++|+.||+|++||+||++++..+. .+ ++||++++++|..+|.|.|||+|+++++..
T Consensus 161 ~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~-~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~ 239 (331)
T 3dss_A 161 PAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVL-LKELELVQNAFFTDPNDQSAWFYHRWLLGA 239 (331)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHH-HHHHHHHHHHHHHSTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 699999999999999999999999999999983 23 589999999999999999999999999887
Q ss_pred hhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHH
Q 009766 188 LLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231 (526)
Q Consensus 188 L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL 231 (526)
.......+ ....+++++|++++++++..+|++ .|+++..++
T Consensus 240 ~~~~~~~~-~~~~~~l~~el~~~~elle~~pd~--~w~l~~~~~ 280 (331)
T 3dss_A 240 GSGRCELS-VEKSTVLQSELESCKELQELEPEN--KWCLLTIIL 280 (331)
T ss_dssp SSCGGGCC-HHHHHHHHHHHHHHHHHHHHCTTC--HHHHHHHHH
T ss_pred ccCccccc-hHHHHHHHHHHHHHHHHHhhCccc--chHHHHHHH
Confidence 63211111 234578999999999999999986 899877755
No 7
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.94 E-value=3.9e-27 Score=244.39 Aligned_cols=168 Identities=19% Similarity=0.355 Sum_probs=151.4
Q ss_pred HHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHH
Q 009766 52 LETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDK 131 (526)
Q Consensus 52 L~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dk 131 (526)
|...|++..+|++++.++.+... .+++|++++++|..||++|++|++|++++..++..+++||+++++
T Consensus 47 i~y~~~y~~~~~~~r~~~~~~e~------------se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~ 114 (349)
T 3q7a_A 47 IMYSEEYKDAMDYFRAIAAKEEK------------SERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNE 114 (349)
T ss_dssp BCCCHHHHHHHHHHHHHHHTTCC------------SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred eeeCHHHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 45778899999999999988753 378999999999999999999999999999986569999999999
Q ss_pred HHHhCCCChhhhhHHHHHHHHh-C-cChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHH
Q 009766 132 FQKADSRNFHAWNYRRFVAASM-N-RSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEF 209 (526)
Q Consensus 132 aLeiDprNyhAW~yRr~lL~~L-g-~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~ 209 (526)
+|..+|+||.+|+||+|++..+ + .+ ++||++++++|+.||+||+||+||++++.+++.... ...+++.+|+++
T Consensus 115 ~L~~nPKny~aW~hR~wlL~~l~~~~~-~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~----~~~~~~~eELe~ 189 (349)
T 3q7a_A 115 FAVQNLKSYQVWHHRLLLLDRISPQDP-VSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGR----ISEAQWGSELDW 189 (349)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHCCSCC-HHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTC----CCHHHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccc----cchhhHHHHHHH
Confidence 9999999999999999999999 7 56 589999999999999999999999999999986421 124567899999
Q ss_pred HHHHHHhCCCCcccHHHHHHHHccccC
Q 009766 210 VHQAIFTDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 210 v~~AI~~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
++++|..||.|.|||+|+++++..+.+
T Consensus 190 ~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 190 CNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 999999999999999999999988643
No 8
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.93 E-value=7e-25 Score=228.21 Aligned_cols=194 Identities=24% Similarity=0.489 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHHHh-hcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHH
Q 009766 20 KAEKLRVLQSQFLHNH-HNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESAL 98 (526)
Q Consensus 20 ~~ek~r~l~~~~~~~~-~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL 98 (526)
...++..+...+...+ ..|.+ ++|+.++.++|.+||+++++|++|+.++..+++ .+++++.+++++|
T Consensus 92 ~~p~~~~a~~~lg~~~~~~g~~-~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~-----------d~~eAl~~~~~al 159 (382)
T 2h6f_A 92 YSDKFRDVYDYFRAVLQRDERS-ERAFKLTRDAIELNAANYTVWHFRRVLLKSLQK-----------DLHEEMNYITAII 159 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCC-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----------CHHHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHHHHCCCh-HHHHHHHHHHHHhCccCHHHHHHHHHHHHHccc-----------CHHHHHHHHHHHH
Confidence 3344555554444444 35666 999999999999999999999999999999862 3899999999999
Q ss_pred HhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHH
Q 009766 99 RQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAW 178 (526)
Q Consensus 99 ~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW 178 (526)
.++|+++.+|+||++++..++ .+++++.+|+++|+++|+|+++|.+|++++..+|.+. +++++++++|+.+|+|.++|
T Consensus 160 ~l~P~~~~a~~~~g~~~~~~g-~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~-eAl~~~~~al~l~P~~~~a~ 237 (382)
T 2h6f_A 160 EEQPKNYQVWHHRRVLVEWLR-DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWD-NELQYVDQLLKEDVRNNSVW 237 (382)
T ss_dssp HHCTTCHHHHHHHHHHHHHHT-CCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCT-THHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChH-HHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999985 8999999999999999999999999999999999995 79999999999999999999
Q ss_pred HHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 179 HNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 179 ~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
++|+.++..+... ..+.++++|++++++||.++|++.++|+|+++++..
T Consensus 238 ~~lg~~l~~l~~~------~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~ 286 (382)
T 2h6f_A 238 NQRYFVISNTTGY------NDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQD 286 (382)
T ss_dssp HHHHHHHHHTTCS------CSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCc------chHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHc
Confidence 9999999985431 123456888999999999999999999999999977
No 9
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.90 E-value=4.5e-24 Score=233.05 Aligned_cols=136 Identities=18% Similarity=0.371 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCC---------hHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcC-h
Q 009766 88 DEELRVVESALRQNFKSYGAWHHRKWILSKGHSS---------IDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRS-E 157 (526)
Q Consensus 88 ~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~---------~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~-~ 157 (526)
+++|++++++|..||++|+||+||++++..++.. +++|+++++++++.+|+||+||+||+|++..++.+ .
T Consensus 46 eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~ 125 (567)
T 1dce_A 46 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNW 125 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCH
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccH
Confidence 6779999999999999999999999999987522 89999999999999999999999999999999954 3
Q ss_pred HHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccc
Q 009766 158 EDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQT 234 (526)
Q Consensus 158 eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~ 234 (526)
++||++++++|+.||+|++||+||++++..++. .+++|+++++++|..+|+|.|||+|+++++..+
T Consensus 126 ~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~-----------~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 126 ARELELCARFLEADERNFHCWDYRRFVAAQAAV-----------APAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCC-----------CHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccHHHHHHHHHHHcCC-----------ChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 589999999999999999999999999999862 269999999999999999999999999999875
No 10
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.82 E-value=4.3e-20 Score=192.16 Aligned_cols=161 Identities=18% Similarity=0.448 Sum_probs=150.6
Q ss_pred HHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHH
Q 009766 50 KLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLL 129 (526)
Q Consensus 50 kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~ 129 (526)
.+|.++|++..+|++++.++...+ .+++++.+++++|.++|+++.+|++|+.++..++..++++++++
T Consensus 88 ~ai~~~p~~~~a~~~lg~~~~~~g------------~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~ 155 (382)
T 2h6f_A 88 VQIIYSDKFRDVYDYFRAVLQRDE------------RSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYI 155 (382)
T ss_dssp SEECCCHHHHHHHHHHHHHHHHTC------------CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hhhhCChhhHHHHHHHHHHHHHCC------------ChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHH
Confidence 467899999999999999998876 37999999999999999999999999999999852399999999
Q ss_pred HHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHH
Q 009766 130 DKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEF 209 (526)
Q Consensus 130 dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~ 209 (526)
+++++++|+|+.+|++|++++..+|.+. +++++++++|+.+|.|+.+|++|++++..+++ +++++++
T Consensus 156 ~~al~l~P~~~~a~~~~g~~~~~~g~~~-eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~------------~~eAl~~ 222 (382)
T 2h6f_A 156 TAIIEEQPKNYQVWHHRRVLVEWLRDPS-QELEFIADILNQDAKNYHAWQHRQWVIQEFKL------------WDNELQY 222 (382)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCCT-THHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC------------CTTHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHccCHH-HHHHHHHHHHHhCccCHHHHHHHHHHHHHcCC------------hHHHHHH
Confidence 9999999999999999999999999995 89999999999999999999999999999875 5899999
Q ss_pred HHHHHHhCCCCcccHHHHHHHHcccc
Q 009766 210 VHQAIFTDPDDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 210 v~~AI~~dP~DeSaW~Y~r~LL~~~~ 235 (526)
+.++|.++|++.++|++++.++..+.
T Consensus 223 ~~~al~l~P~~~~a~~~lg~~l~~l~ 248 (382)
T 2h6f_A 223 VDQLLKEDVRNNSVWNQRYFVISNTT 248 (382)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999988743
No 11
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.69 E-value=2.5e-15 Score=141.34 Aligned_cols=180 Identities=12% Similarity=0.042 Sum_probs=162.8
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHH
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHH 110 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~H 110 (526)
-......|.+ ++|+..+.++|..+|++..+|..++.++...+ .+++++..+++++..+|++..+|..
T Consensus 12 g~~~~~~g~~-~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g------------~~~~A~~~~~~al~~~P~~~~a~~~ 78 (217)
T 2pl2_A 12 GVQLYALGRY-DAALTLFERALKENPQDPEALYWLARTQLKLG------------LVNPALENGKTLVARTPRYLGGYMV 78 (217)
T ss_dssp HHHHHHTTCH-HHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 3345578899 89999999999999999999999999999887 4899999999999999999999999
Q ss_pred HHHHHHhC-----------CCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHH
Q 009766 111 RKWILSKG-----------HSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWH 179 (526)
Q Consensus 111 RrwvL~kl-----------~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~ 179 (526)
++.++... + .+++++..++++++++|.+..+|..++.++..+|.++ ++++.++++++.+ .+..+|.
T Consensus 79 lg~~~~~~~~~~~~~~~~~g-~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~-~A~~~~~~al~~~-~~~~~~~ 155 (217)
T 2pl2_A 79 LSEAYVALYRQAEDRERGKG-YLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERD-KAEASLKQALALE-DTPEIRS 155 (217)
T ss_dssp HHHHHHHHHHTCSSHHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHC-CCHHHHH
T ss_pred HHHHHHHhhhhhhhhccccc-CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChH-HHHHHHHHHHhcc-cchHHHH
Confidence 99999877 5 7899999999999999999999999999999999994 8999999999999 9999999
Q ss_pred HHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccccCCC
Q 009766 180 NRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVRVD 238 (526)
Q Consensus 180 yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~~~e 238 (526)
.++.++..+++ +++++..+.+++..+|++..+|..+..++....+.+
T Consensus 156 ~la~~~~~~g~------------~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~ 202 (217)
T 2pl2_A 156 ALAELYLSMGR------------LDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAE 202 (217)
T ss_dssp HHHHHHHHHTC------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHcCC------------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHH
Confidence 99999988875 799999999999999999999998888887765543
No 12
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.68 E-value=3.1e-15 Score=134.27 Aligned_cols=161 Identities=10% Similarity=0.038 Sum_probs=151.2
Q ss_pred HhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 009766 34 NHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKW 113 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrw 113 (526)
.+..|+| ++|+..+.++|.++|++..+|..++.++..++ .+++++..+..++..+|++..+|...+.
T Consensus 15 ~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~------------~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
T 3vtx_A 15 KRTKGDF-DGAIRAYKKVLKADPNNVETLLKLGKTYMDIG------------LPNDAIESLKKFVVLDTTSAEAYYILGS 81 (184)
T ss_dssp HHHHTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred HHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 4567999 89999999999999999999999999999887 4899999999999999999999999999
Q ss_pred HHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhc
Q 009766 114 ILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKV 193 (526)
Q Consensus 114 vL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~ 193 (526)
+..... .++.+++.+.++++++|.+..+|..++.+...+|.+. +++++++++++.+|.+..+|++++.++..+++
T Consensus 82 ~~~~~~-~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~-~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~--- 156 (184)
T 3vtx_A 82 ANFMID-EKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHD-KAIEAYEKTISIKPGFIRAYQSIGLAYEGKGL--- 156 (184)
T ss_dssp HHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---
T ss_pred HHHHcC-CHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCch-hHHHHHHHHHHhcchhhhHHHHHHHHHHHCCC---
Confidence 998874 8999999999999999999999999999999999984 89999999999999999999999999998875
Q ss_pred cCccchhhhHHHHHHHHHHHHHhCCCCc
Q 009766 194 EGFVSKEKVLPDEYEFVHQAIFTDPDDQ 221 (526)
Q Consensus 194 ~g~~~~~eileeELe~v~~AI~~dP~De 221 (526)
++++++++++||.++|++.
T Consensus 157 ---------~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 157 ---------RDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp ---------HHHHHHHHHHHHHTTHHHH
T ss_pred ---------HHHHHHHHHHHHhCCccCH
Confidence 7999999999999999864
No 13
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.58 E-value=2.1e-13 Score=126.59 Aligned_cols=186 Identities=10% Similarity=-0.032 Sum_probs=160.0
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHH
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNP-ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWH 109 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNP-d~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~ 109 (526)
-......|+| ++|+..+.++|.++| .+..+|..++.+...++ .+++++..+++++..+|++..+|.
T Consensus 14 g~~~~~~~~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~------------~~~~A~~~~~~al~~~p~~~~~~~ 80 (228)
T 4i17_A 14 GNDALNAKNY-AVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIK------------KYKEAADYFDIAIKKNYNLANAYI 80 (228)
T ss_dssp HHHHHHTTCH-HHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHTTCSHHHHHH
T ss_pred HHHHHHccCH-HHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhh------------cHHHHHHHHHHHHHhCcchHHHHH
Confidence 3445578999 899999999999999 99999999999999887 489999999999999999999999
Q ss_pred HHHHHHHhCCCChHHHHHHHHHHHHhCCCCh-------hhhhHHHHHHHHhCcChHHHHHHHHHHHHhccC--ChhHHHH
Q 009766 110 HRKWILSKGHSSIDNELRLLDKFQKADSRNF-------HAWNYRRFVAASMNRSEEDELKYTEDMICNNFS--NYSAWHN 180 (526)
Q Consensus 110 HRrwvL~kl~~~~eeELe~~dkaLeiDprNy-------hAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPs--NySAW~y 180 (526)
.++.++...+ .++++++.++++++++|.|. .+|..++.+...++.+ +++++++.++++.+|. +..+|..
T Consensus 81 ~l~~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~~ 158 (228)
T 4i17_A 81 GKSAAYRDMK-NNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNI-EKAEENYKHATDVTSKKWKTDALYS 158 (228)
T ss_dssp HHHHHHHHTT-CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred HHHHHHHHcc-cHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccH-HHHHHHHHHHHhcCCCcccHHHHHH
Confidence 9999999885 99999999999999999999 6799999999999998 4899999999999999 8899999
Q ss_pred HHHHHHHhhhhh--c-cC------------ccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHH
Q 009766 181 RSLLLSNLLKRK--V-EG------------FVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231 (526)
Q Consensus 181 R~~LL~~L~~~~--~-~g------------~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL 231 (526)
++.++...+... . .. .....+.++++++++.+++.++|++..+...+..+.
T Consensus 159 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~ 224 (228)
T 4i17_A 159 LGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVK 224 (228)
T ss_dssp HHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 999988776530 0 00 011233468999999999999999998876655544
No 14
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.53 E-value=1.5e-13 Score=154.45 Aligned_cols=143 Identities=16% Similarity=0.079 Sum_probs=135.7
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRK 112 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRr 112 (526)
...+.|+| ++|+.++.++|.++|++..+|+.++.++..++ .+++++..++++|+++|++..+|+.++
T Consensus 18 ~~~~~G~~-~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g------------~~~eA~~~~~~Al~l~P~~~~a~~nLg 84 (723)
T 4gyw_A 18 IKREQGNI-EEAVRLYRKALEVFPEFAAAHSNLASVLQQQG------------KLQEALMHYKEAIRISPTFADAYSNMG 84 (723)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 44567999 89999999999999999999999999999987 489999999999999999999999999
Q ss_pred HHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhh
Q 009766 113 WILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLK 190 (526)
Q Consensus 113 wvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~ 190 (526)
.++..++ .+++++++++++++++|.+..+|.+++.++..+|.++ +++++++++|+.+|.+..+|.+++.++..+++
T Consensus 85 ~~l~~~g-~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~-eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~ 160 (723)
T 4gyw_A 85 NTLKEMQ-DVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIP-EAIASYRTALKLKPDFPDAYCNLAHCLQIVCD 160 (723)
T ss_dssp HHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHhCCCChHHHhhhhhHHHhccc
Confidence 9999985 9999999999999999999999999999999999984 89999999999999999999999999998876
No 15
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.52 E-value=8.7e-14 Score=153.83 Aligned_cols=174 Identities=8% Similarity=-0.135 Sum_probs=160.4
Q ss_pred HHHhhcCCCcHHHHHHHHHHH--------HhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCC
Q 009766 32 LHNHHNHIYSKEAVELSTKLL--------ETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFK 103 (526)
Q Consensus 32 ~~~~~~geyseEAL~lt~kaL--------~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPK 103 (526)
......|++ ++|++.+.+++ ..+|++..+|..++.++..++ .+++++..+++++..+|+
T Consensus 399 ~~a~~~~~~-~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g------------~~~~A~~~~~~al~~~p~ 465 (681)
T 2pzi_A 399 LQATVLSQP-VQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLG------------DVAKATRKLDDLAERVGW 465 (681)
T ss_dssp HHHTTTCCH-HHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHHCC
T ss_pred hhcccccCH-HHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcC------------CHHHHHHHHHHHhccCcc
Confidence 333678888 89999999999 999999999999999999887 489999999999999999
Q ss_pred ChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHH
Q 009766 104 SYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSL 183 (526)
Q Consensus 104 sy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~ 183 (526)
+..+|++++.++...+ .++++++.++++++++|.+..+|.+++.++..+|.+. + +++++++++.+|.+..+|++++.
T Consensus 466 ~~~a~~~lg~~~~~~g-~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~-~-~~~~~~al~~~P~~~~a~~~lg~ 542 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTG-DYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTD-E-HKFYQTVWSTNDGVISAAFGLAR 542 (681)
T ss_dssp CHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCC-T-TCHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChH-H-HHHHHHHHHhCCchHHHHHHHHH
Confidence 9999999999999884 9999999999999999999999999999999999996 5 99999999999999999999999
Q ss_pred HHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 184 LLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 184 LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
++..+++ ++++++.+.+|+.++|++..+|..+..++..
T Consensus 543 ~~~~~g~------------~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 543 ARSAEGD------------RVGAVRTLDEVPPTSRHFTTARLTSAVTLLS 580 (681)
T ss_dssp HHHHTTC------------HHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-
T ss_pred HHHHcCC------------HHHHHHHHHhhcccCcccHHHHHHHHHHHHc
Confidence 9998875 7999999999999999999999887777644
No 16
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.51 E-value=5.1e-13 Score=141.04 Aligned_cols=175 Identities=19% Similarity=0.078 Sum_probs=160.1
Q ss_pred HhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 009766 34 NHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKW 113 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrw 113 (526)
....|+|.++|+..+.++|.++|++..+|+..+.++...+ .+++++.++++++..+|+ ..+|...+.
T Consensus 112 ~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g------------~~~~A~~~~~~al~~~p~-~~~~~~lg~ 178 (474)
T 4abn_A 112 LNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKG------------DVTSAHTCFSGALTHCKN-KVSLQNLSM 178 (474)
T ss_dssp HTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHTTCCC-HHHHHHHHH
T ss_pred HHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHhhCCC-HHHHHHHHH
Confidence 3456888789999999999999999999999999999887 489999999999999999 799999999
Q ss_pred HHHhC---------CCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHh--------CcChHHHHHHHHHHHHhcc---C
Q 009766 114 ILSKG---------HSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASM--------NRSEEDELKYTEDMICNNF---S 173 (526)
Q Consensus 114 vL~kl---------~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~L--------g~~~eeELe~tdkaI~~nP---s 173 (526)
++... + .+++++++++++++++|.+..+|...+.++..+ +.+ ++++++++++++.+| .
T Consensus 179 ~~~~~~~~~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~-~~A~~~~~~al~~~p~~~~ 256 (474)
T 4abn_A 179 VLRQLQTDSGDEHSR-HVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKIS-QQALSAYAQAEKVDRKASS 256 (474)
T ss_dssp HHTTCCCSCHHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHHHHHCGGGGG
T ss_pred HHHHhccCChhhhhh-hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchH-HHHHHHHHHHHHhCCCccc
Confidence 99876 4 789999999999999999999999999999888 777 589999999999999 9
Q ss_pred ChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcccc
Q 009766 174 NYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 174 NySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~ 235 (526)
+..+|++++.++..+++ ++++++.+.+++.++|++..+|..+..++..+.
T Consensus 257 ~~~~~~~lg~~~~~~g~------------~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg 306 (474)
T 4abn_A 257 NPDLHLNRATLHKYEES------------YGEALEGFSQAAALDPAWPEPQQREQQLLEFLS 306 (474)
T ss_dssp CHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 99999999999998875 799999999999999999999988887775543
No 17
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.51 E-value=2.7e-13 Score=126.54 Aligned_cols=175 Identities=10% Similarity=-0.016 Sum_probs=141.2
Q ss_pred HHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHH----------------HHHHHHhhhcCCCCCCchhhhhHHH
Q 009766 26 VLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNY----------------RKLAVQHKLTENDSDPDSLKSILDE 89 (526)
Q Consensus 26 ~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~----------------Rr~vL~~L~~~~~sdPe~~~~~~~e 89 (526)
.+...-......|+| ++|+..+.++|.++|++..+|.+ ++.++...+ .+++
T Consensus 6 ~~~~~g~~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g------------~~~~ 72 (208)
T 3urz_A 6 EMLQKVSAAIEAGQN-GQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNR------------NYDK 72 (208)
T ss_dssp HHHHHHHHHHHTTCH-HHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTT------------CHHH
T ss_pred HHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCC------------CHHH
Confidence 344455566788999 89999999999999999999999 999888876 4899
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcCh-HHHHHHHHHHH
Q 009766 90 ELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSE-EDELKYTEDMI 168 (526)
Q Consensus 90 EL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~-eeELe~tdkaI 168 (526)
++.++++++..+|++..+|..++.++...+ .+++++++++++++++|.|..+|..++.++...+... ......+.+.+
T Consensus 73 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~ 151 (208)
T 3urz_A 73 AYLFYKELLQKAPNNVDCLEACAEMQVCRG-QEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLS 151 (208)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999885 8999999999999999999999999999876655432 23344555555
Q ss_pred HhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHH
Q 009766 169 CNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHL 228 (526)
Q Consensus 169 ~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r 228 (526)
..+| +..+|++++.....+++ ++++++++++|+.++|+.+ +..++.
T Consensus 152 ~~~~-~~~a~~~~g~~~~~~~~------------~~~A~~~~~~al~l~P~~~-~~~~l~ 197 (208)
T 3urz_A 152 SPTK-MQYARYRDGLSKLFTTR------------YEKARNSLQKVILRFPSTE-AQKTLD 197 (208)
T ss_dssp CCCH-HHHHHHHHHHHHHHHHT------------HHHHHHHHHHHTTTSCCHH-HHHHHH
T ss_pred CCCc-hhHHHHHHHHHHHHccC------------HHHHHHHHHHHHHhCCCHH-HHHHHH
Confidence 4333 33578888877776654 7999999999999999855 333433
No 18
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.50 E-value=9.2e-13 Score=125.95 Aligned_cols=184 Identities=11% Similarity=-0.058 Sum_probs=165.0
Q ss_pred HHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChH
Q 009766 27 LQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG 106 (526)
Q Consensus 27 l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~ 106 (526)
+..........|+| ++|+.++.+++..+|.+..++.....++..++ .+++++.++++++..+|++..
T Consensus 25 ~~~~a~~~~~~g~~-~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~ 91 (330)
T 3hym_B 25 VVSLAERHYYNCDF-KMCYKLTSVVMEKDPFHASCLPVHIGTLVELN------------KANELFYLSHKLVDLYPSNPV 91 (330)
T ss_dssp HHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHT------------CHHHHHHHHHHHHHHCTTSTH
T ss_pred HHHHHHHHHHcCCH-HHHHHHHHHHHHcCCCChhhHHHHHHHHHHhh------------hHHHHHHHHHHHHHhCcCCHH
Confidence 33444455567999 89999999999999999999999999888776 489999999999999999999
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHH
Q 009766 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLS 186 (526)
Q Consensus 107 AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~ 186 (526)
+|...+.++...+..+++++++++++++.+|.+..+|...+.+....+.+ +++++.+.+++..+|.+..+|.+.+.++.
T Consensus 92 ~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 170 (330)
T 3hym_B 92 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEH-DQAMAAYFTAAQLMKGCHLPMLYIGLEYG 170 (330)
T ss_dssp HHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHTTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCH-HHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 99999999988743799999999999999999999999999999999998 48999999999999999999999999888
Q ss_pred HhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccccC
Q 009766 187 NLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 187 ~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
..+. ++++++.+.+++..+|++..+|+.+..++....+
T Consensus 171 ~~~~------------~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~ 208 (330)
T 3hym_B 171 LTNN------------SKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGE 208 (330)
T ss_dssp HTTC------------HHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTC
T ss_pred HHhh------------HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccc
Confidence 7664 7999999999999999999999888888876543
No 19
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.50 E-value=4.7e-13 Score=150.35 Aligned_cols=157 Identities=13% Similarity=0.062 Sum_probs=145.9
Q ss_pred hCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 009766 54 TNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQ 133 (526)
Q Consensus 54 iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaL 133 (526)
.+|++..+|+..+.++..++ .+++++.+++++|+++|++..+|+.++.++.+.+ .++++++.+++++
T Consensus 4 s~P~~a~al~nLG~~~~~~G------------~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g-~~~eA~~~~~~Al 70 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQG------------NIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG-KLQEALMHYKEAI 70 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHH
Confidence 57999999999999999987 4899999999999999999999999999999985 9999999999999
Q ss_pred HhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHH
Q 009766 134 KADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQA 213 (526)
Q Consensus 134 eiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~A 213 (526)
+++|.+..+|.+++.++..+|.+. +++++++++|+.+|.+..+|++++.++..+++ ++++++++++|
T Consensus 71 ~l~P~~~~a~~nLg~~l~~~g~~~-~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~------------~~eAi~~~~~A 137 (723)
T 4gyw_A 71 RISPTFADAYSNMGNTLKEMQDVQ-GALQCYTRAIQINPAFADAHSNLASIHKDSGN------------IPEAIASYRTA 137 (723)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC------------HHHHHHHHHHH
Confidence 999999999999999999999984 89999999999999999999999999998875 79999999999
Q ss_pred HHhCCCCcccHHHHHHHHccccC
Q 009766 214 IFTDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 214 I~~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
+.++|++..+|..+..++.....
T Consensus 138 l~l~P~~~~a~~~L~~~l~~~g~ 160 (723)
T 4gyw_A 138 LKLKPDFPDAYCNLAHCLQIVCD 160 (723)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HHhCCCChHHHhhhhhHHHhccc
Confidence 99999999999988888755443
No 20
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.49 E-value=1.9e-12 Score=115.94 Aligned_cols=155 Identities=12% Similarity=0.015 Sum_probs=142.4
Q ss_pred CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q 009766 56 PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA 135 (526)
Q Consensus 56 Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei 135 (526)
++..++|+..+.+....+ .+++++.+++++|+.+|++..+|..++.++...+ .+++++..+.+++..
T Consensus 2 ge~~~iy~~lG~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~-~~~~a~~~~~~~~~~ 68 (184)
T 3vtx_A 2 GETTTIYMDIGDKKRTKG------------DFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIG-LPNDAIESLKKFVVL 68 (184)
T ss_dssp --CHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHHhc
Confidence 467889999999998887 5899999999999999999999999999999885 899999999999999
Q ss_pred CCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHH
Q 009766 136 DSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIF 215 (526)
Q Consensus 136 DprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~ 215 (526)
+|.+..+|...+.+....+.+ +..++.+.+++..+|.+..+|..++.++..+++ ++++++.+++++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~------------~~~A~~~~~~~l~ 135 (184)
T 3vtx_A 69 DTTSAEAYYILGSANFMIDEK-QAAIDALQRAIALNTVYADAYYKLGLVYDSMGE------------HDKAIEAYEKTIS 135 (184)
T ss_dssp CCCCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCccchHHHHHHHHHHHHhCC------------chhHHHHHHHHHH
Confidence 999999999999999998888 479999999999999999999999999988875 7999999999999
Q ss_pred hCCCCcccHHHHHHHHccccC
Q 009766 216 TDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 216 ~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
.+|++..+|+.++.++.+..+
T Consensus 136 ~~p~~~~~~~~lg~~~~~~g~ 156 (184)
T 3vtx_A 136 IKPGFIRAYQSIGLAYEGKGL 156 (184)
T ss_dssp HCTTCHHHHHHHHHHHHHTTC
T ss_pred hcchhhhHHHHHHHHHHHCCC
Confidence 999999999999888877544
No 21
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.49 E-value=2.8e-12 Score=127.92 Aligned_cols=187 Identities=12% Similarity=0.043 Sum_probs=127.8
Q ss_pred HhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCC----------CCchh------------hhhHHHHH
Q 009766 34 NHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDS----------DPDSL------------KSILDEEL 91 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~s----------dPe~~------------~~~~~eEL 91 (526)
....|.+ ++|+..+.+++.++|++..+|+.++.++...+..+.+ +|+.. ...+++++
T Consensus 77 ~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 155 (388)
T 1w3b_A 77 YKERGQL-QEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAK 155 (388)
T ss_dssp HHHHTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHCCCH-HHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHH
Confidence 3445666 6777777777777777777777777776666532110 12110 13466677
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhc
Q 009766 92 RVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNN 171 (526)
Q Consensus 92 ~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~n 171 (526)
.++++++..+|.+..+|...+.++...+ .++++++.++++++++|.+..+|...+.+....+.+. ++++.+.+++..+
T Consensus 156 ~~~~~al~~~p~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~-~A~~~~~~al~~~ 233 (388)
T 1w3b_A 156 ACYLKAIETQPNFAVAWSNLGCVFNAQG-EIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFD-RAVAAYLRALSLS 233 (388)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTT-HHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHH-HHHHHHHHHHhhC
Confidence 7777777777777777777766666653 6677777777777777777777777777777666664 5677777777777
Q ss_pred cCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcccc
Q 009766 172 FSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 172 PsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~ 235 (526)
|.+..+|..++.++...++ ++++++.+.+++..+|++..+|+.+..++.+..
T Consensus 234 p~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 285 (388)
T 1w3b_A 234 PNHAVVHGNLACVYYEQGL------------IDLAIDTYRRAIELQPHFPDAYCNLANALKEKG 285 (388)
T ss_dssp TTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHS
T ss_pred cCCHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Confidence 7777777777666665543 688899999999999999988888777776643
No 22
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.48 E-value=2.2e-12 Score=127.35 Aligned_cols=178 Identities=8% Similarity=0.007 Sum_probs=130.6
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRK 112 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRr 112 (526)
.....|+| ++|+.++.+++..+|++..+|+..+.++...+ .+++++..+++++..+|++..+|...+
T Consensus 74 ~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~l~ 140 (365)
T 4eqf_A 74 KRLKEGDL-PVTILFMEAAILQDPGDAEAWQFLGITQAENE------------NEQAAIVALQRCLELQPNNLKALMALA 140 (365)
T ss_dssp HHHHHTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHCCCH-HHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 34455667 67777777777777777777777777777665 366666666666666666666666666
Q ss_pred HHHHhCC-------------------------------------------CChHHHHHHHHHHHHhCCC--ChhhhhHHH
Q 009766 113 WILSKGH-------------------------------------------SSIDNELRLLDKFQKADSR--NFHAWNYRR 147 (526)
Q Consensus 113 wvL~kl~-------------------------------------------~~~eeELe~~dkaLeiDpr--NyhAW~yRr 147 (526)
.++...+ +.+++++++++++++++|. +..+|...+
T Consensus 141 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~ 220 (365)
T 4eqf_A 141 VSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLG 220 (365)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHH
T ss_pred HHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHH
Confidence 6665543 1244555556666666666 677777777
Q ss_pred HHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHH
Q 009766 148 FVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYH 227 (526)
Q Consensus 148 ~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~ 227 (526)
.++...|.+ ++++++++++++.+|.+..+|...+.++..+++ ++++++.+.+++..+|++..+|+.+
T Consensus 221 ~~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~al~~~p~~~~~~~~l 287 (365)
T 4eqf_A 221 VLFHLSGEF-NRAIDAFNAALTVRPEDYSLWNRLGATLANGDR------------SEEAVEAYTRALEIQPGFIRSRYNL 287 (365)
T ss_dssp HHHHHHTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHCCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHhcCCCchHHHHHH
Confidence 777777777 478888888888888888888888888777664 7999999999999999999999888
Q ss_pred HHHHccccC
Q 009766 228 LWLLDQTVR 236 (526)
Q Consensus 228 r~LL~~~~~ 236 (526)
..++....+
T Consensus 288 ~~~~~~~g~ 296 (365)
T 4eqf_A 288 GISCINLGA 296 (365)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHCCC
Confidence 888766544
No 23
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.48 E-value=6.1e-12 Score=115.54 Aligned_cols=170 Identities=16% Similarity=0.077 Sum_probs=147.0
Q ss_pred HhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 009766 34 NHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKW 113 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrw 113 (526)
....|++ ++|+..+.+++..+|++..+|...+.++...+ .+++++.++++++..+|++..+|...+.
T Consensus 67 ~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 133 (243)
T 2q7f_A 67 LSSVNEL-ERALAFYDKALELDSSAATAYYGAGNVYVVKE------------MYKEAKDMFEKALRAGMENGDLFYMLGT 133 (243)
T ss_dssp HHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHTCCSHHHHHHHHH
T ss_pred HHHcCCH-HHHHHHHHHHHHcCCcchHHHHHHHHHHHHhc------------cHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 3456777 78888999999999988888888888887775 4789999999999999999999999998
Q ss_pred HHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhc
Q 009766 114 ILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKV 193 (526)
Q Consensus 114 vL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~ 193 (526)
++...+ .+++++.+++++++.+|.+..+|...+.+....|.+. ++++++.+++..+|.+..+|..++.++..++.
T Consensus 134 ~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--- 208 (243)
T 2q7f_A 134 VLVKLE-QPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLD-EALSQFAAVTEQDPGHADAFYNAGVTYAYKEN--- 208 (243)
T ss_dssp HHHHTS-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCH-HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---
T ss_pred HHHHhc-cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHhCcccHHHHHHHHHHHHHccC---
Confidence 888874 8999999999999999999999999999999999884 78999999999999999999999988887764
Q ss_pred cCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHH
Q 009766 194 EGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWL 230 (526)
Q Consensus 194 ~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~L 230 (526)
++++++++.+++..+|++..+|..+..+
T Consensus 209 ---------~~~A~~~~~~~~~~~p~~~~~~~~~~~l 236 (243)
T 2q7f_A 209 ---------REKALEMLDKAIDIQPDHMLALHAKKLL 236 (243)
T ss_dssp ---------TTHHHHHHHHHHHHCTTCHHHHHHHTC-
T ss_pred ---------HHHHHHHHHHHHccCcchHHHHHHHHHH
Confidence 5889999999999999999998654443
No 24
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.48 E-value=3.2e-12 Score=127.46 Aligned_cols=173 Identities=13% Similarity=0.083 Sum_probs=126.3
Q ss_pred hcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 009766 36 HNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWIL 115 (526)
Q Consensus 36 ~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL 115 (526)
..|.+ +++..++..++..+|.+..+|+.++.++...+ .+++++.++++++..+|++..+|...+.++
T Consensus 45 ~~~~~-~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 111 (388)
T 1w3b_A 45 QCRRL-DRSAHFSTLAIKQNPLLAEAYSNLGNVYKERG------------QLQEAIEHYRHALRLKPDFIDGYINLAAAL 111 (388)
T ss_dssp HTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcCCH-HHHHHHHHHHHhcCCCchHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHcCcchHHHHHHHHHHH
Confidence 34555 66777777777777777777777777776665 367777777777777777777777777777
Q ss_pred HhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccC
Q 009766 116 SKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEG 195 (526)
Q Consensus 116 ~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g 195 (526)
...+ .++++++.+.++++.+|.+..+|...+.++..+|.+ +++++.+.+++..+|.+..+|...+.++...+.
T Consensus 112 ~~~g-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~----- 184 (388)
T 1w3b_A 112 VAAG-DMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRL-EEAKACYLKAIETQPNFAVAWSNLGCVFNAQGE----- 184 (388)
T ss_dssp HHHS-CSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC-----
T ss_pred HHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-----
Confidence 6663 677777777777777777777777777777777776 367777777777777777777777777665543
Q ss_pred ccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcccc
Q 009766 196 FVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 196 ~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~ 235 (526)
++++++.+.+++..+|++..+|..+..++....
T Consensus 185 -------~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~ 217 (388)
T 1w3b_A 185 -------IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 217 (388)
T ss_dssp -------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred -------HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcC
Confidence 577888888888888888888877777666543
No 25
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.46 E-value=1.5e-11 Score=111.03 Aligned_cols=175 Identities=13% Similarity=0.054 Sum_probs=153.2
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHH
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHH 110 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~H 110 (526)
.......|++ ++|+..+.+++..+|++..+|...+.++...+ .+++++..+++++..+|.+..+|..
T Consensus 15 ~~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------------~~~~A~~~~~~a~~~~~~~~~~~~~ 81 (225)
T 2vq2_A 15 AMEYMRGQDY-RQATASIEDALKSDPKNELAWLVRAEIYQYLK------------VNDKAQESFRQALSIKPDSAEINNN 81 (225)
T ss_dssp HHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHhhH-HHHHHHHHHHHHhCccchHHHHHHHHHHHHcC------------ChHHHHHHHHHHHHhCCCChHHHHH
Confidence 3344567888 89999999999999999999999999988876 4899999999999999999999999
Q ss_pred HHHHHHhC-CCChHHHHHHHHHHHH--hCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHH
Q 009766 111 RKWILSKG-HSSIDNELRLLDKFQK--ADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSN 187 (526)
Q Consensus 111 RrwvL~kl-~~~~eeELe~~dkaLe--iDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~ 187 (526)
.+.++... + .+++++.+++++++ .+|.+..+|...+.+....|.+ +++++++.++++.+|.+..+|...+.++..
T Consensus 82 l~~~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 159 (225)
T 2vq2_A 82 YGWFLCGRLN-RPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQF-GLAEAYLKRSLAAQPQFPPAFKELARTKML 159 (225)
T ss_dssp HHHHHHTTTC-CHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC-cHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Confidence 99998877 6 89999999999999 7777789999999999999988 479999999999999999999999999887
Q ss_pred hhhhhccCccchhhhHHHHHHHHHHHHHhCC-CCcccHHHHHHHHc
Q 009766 188 LLKRKVEGFVSKEKVLPDEYEFVHQAIFTDP-DDQSGWFYHLWLLD 232 (526)
Q Consensus 188 L~~~~~~g~~~~~eileeELe~v~~AI~~dP-~DeSaW~Y~r~LL~ 232 (526)
.+. ++++++.+.+++..+| ++..+|.....+..
T Consensus 160 ~~~------------~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (225)
T 2vq2_A 160 AGQ------------LGDADYYFKKYQSRVEVLQADDLLLGWKIAK 193 (225)
T ss_dssp HTC------------HHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred cCC------------HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 765 6899999999999999 88888755444433
No 26
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.46 E-value=2.8e-12 Score=117.84 Aligned_cols=177 Identities=15% Similarity=0.074 Sum_probs=154.6
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRK 112 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRr 112 (526)
.....|++ ++|+..+.+++..+|++..+|...+.++...+ .+++++.++++++..+|++..+|....
T Consensus 32 ~~~~~~~~-~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~la 98 (243)
T 2q7f_A 32 RGSEFGDY-EKAAEAFTKAIEENKEDAIPYINFANLLSSVN------------ELERALAFYDKALELDSSAATAYYGAG 98 (243)
T ss_dssp -----------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHhhCH-HHHHHHHHHHHHhCcccHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 34567888 89999999999999999999999999998886 489999999999999999999999999
Q ss_pred HHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhh
Q 009766 113 WILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRK 192 (526)
Q Consensus 113 wvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~ 192 (526)
.++...+ .+++++++++++++.+|.+..+|...+.+....+.+ +++++++++++..+|.+..+|...+.++...+.
T Consensus 99 ~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-- 174 (243)
T 2q7f_A 99 NVYVVKE-MYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQP-KLALPYLQRAVELNENDTEARFQFGMCLANEGM-- 174 (243)
T ss_dssp HHHHHTT-CHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC--
T ss_pred HHHHHhc-cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccH-HHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCC--
Confidence 9998884 899999999999999999999999999999999998 489999999999999999999999999887765
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccccC
Q 009766 193 VEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 193 ~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
++++++.+.+++..+|++..+|..+..++....+
T Consensus 175 ----------~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 208 (243)
T 2q7f_A 175 ----------LDEALSQFAAVTEQDPGHADAFYNAGVTYAYKEN 208 (243)
T ss_dssp ----------CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred ----------HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccC
Confidence 5899999999999999999999888888766544
No 27
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.45 E-value=6.5e-12 Score=120.04 Aligned_cols=183 Identities=11% Similarity=0.010 Sum_probs=123.8
Q ss_pred hcC-CCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCC----------CCch------------hhhhHHHHHH
Q 009766 36 HNH-IYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDS----------DPDS------------LKSILDEELR 92 (526)
Q Consensus 36 ~~g-eyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~s----------dPe~------------~~~~~~eEL~ 92 (526)
..| .+ ++|+..+.+++..+|++..+|...+.++...+..+.+ .|+. ....+++++.
T Consensus 102 ~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 180 (330)
T 3hym_B 102 MVGHKN-EHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAER 180 (330)
T ss_dssp HSCSCH-HHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhhhhH-HHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHH
Confidence 344 44 5566666666666666666666666555555421000 0100 0134677777
Q ss_pred HHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhC---------CCChhhhhHHHHHHHHhCcChHHHHHH
Q 009766 93 VVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKAD---------SRNFHAWNYRRFVAASMNRSEEDELKY 163 (526)
Q Consensus 93 ~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiD---------prNyhAW~yRr~lL~~Lg~~~eeELe~ 163 (526)
.+++++..+|++..+|...+.++...+ .+++++.+++++++.. |.+..+|...+.+....|.+ ++++++
T Consensus 181 ~~~~al~~~~~~~~~~~~l~~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~-~~A~~~ 258 (330)
T 3hym_B 181 FFSQALSIAPEDPFVMHEVGVVAFQNG-EWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKY-AEALDY 258 (330)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCH-HHHHHH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCH-HHHHHH
Confidence 777777777777777777777777663 6777777777777765 55666777777777777776 367777
Q ss_pred HHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 164 TEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 164 tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
++++++.+|.+..+|...+.++..+++ ++++++++.+++..+|++..+|..+..++..
T Consensus 259 ~~~a~~~~~~~~~~~~~la~~~~~~g~------------~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 316 (330)
T 3hym_B 259 HRQALVLIPQNASTYSAIGYIHSLMGN------------FENAVDYFHTALGLRRDDTFSVTMLGHCIEM 316 (330)
T ss_dssp HHHHHHHSTTCSHHHHHHHHHHHHHTC------------HHHHHHHHHTTTTTCSCCHHHHHHHHHHHHT
T ss_pred HHHHHhhCccchHHHHHHHHHHHHhcc------------HHHHHHHHHHHHccCCCchHHHHHHHHHHHH
Confidence 777777777777777777777776654 6888888888888888888888887777744
No 28
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.44 E-value=9.7e-12 Score=115.70 Aligned_cols=183 Identities=11% Similarity=0.006 Sum_probs=160.1
Q ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC
Q 009766 25 RVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS 104 (526)
Q Consensus 25 r~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs 104 (526)
..+...-......|++ ++|+..+.+++..+|++..+|...+.++...+ .+++++..+++++..+|.+
T Consensus 38 ~~~~~~a~~~~~~~~~-~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~------------~~~~A~~~~~~a~~~~~~~ 104 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNT-EQAKVPLRKALEIDPSSADAHAALAVVFQTEM------------EPKLADEEYRKALASDSRN 104 (252)
T ss_dssp HHHHHHHHHHHHTTCT-GGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCh-HHHHHHHHHHHhcCCChHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHCcCc
Confidence 3344444455678899 89999999999999999999999999988876 4899999999999999999
Q ss_pred hHHHHHHHHHHHhCCCChHHHHHHHHHHHH--hCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHH
Q 009766 105 YGAWHHRKWILSKGHSSIDNELRLLDKFQK--ADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRS 182 (526)
Q Consensus 105 y~AW~HRrwvL~kl~~~~eeELe~~dkaLe--iDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~ 182 (526)
..+|.....++...+ .+++++++++++++ .+|.+..+|...+.++...|.+ +++++++.+++..+|.+..+|...+
T Consensus 105 ~~~~~~la~~~~~~g-~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~-~~A~~~~~~~~~~~~~~~~~~~~la 182 (252)
T 2ho1_A 105 ARVLNNYGGFLYEQK-RYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKP-AQAKEYFEKSLRLNRNQPSVALEMA 182 (252)
T ss_dssp HHHHHHHHHHHHHTT-CHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-HHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCH-HHHHHHHHHHHhcCcccHHHHHHHH
Confidence 999999999998874 89999999999999 8899999999999999999988 4899999999999999999999999
Q ss_pred HHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccc
Q 009766 183 LLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQT 234 (526)
Q Consensus 183 ~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~ 234 (526)
.++...++ ++++++.+.+++..+|++..+|.....++...
T Consensus 183 ~~~~~~g~------------~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (252)
T 2ho1_A 183 DLLYKERE------------YVPARQYYDLFAQGGGQNARSLLLGIRLAKVF 222 (252)
T ss_dssp HHHHHTTC------------HHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHcCC------------HHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHc
Confidence 88887764 68899999999999999988887766666543
No 29
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.44 E-value=8.6e-12 Score=120.01 Aligned_cols=182 Identities=11% Similarity=-0.005 Sum_probs=159.2
Q ss_pred HHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChH
Q 009766 27 LQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG 106 (526)
Q Consensus 27 l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~ 106 (526)
+...-......|+| ++|+..+.+++..+|++..+|..++.++..++ .+++++..+++++..+|.+..
T Consensus 6 ~~~~~~~~~~~g~~-~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~ 72 (359)
T 3ieg_A 6 HLELGKKLLAAGQL-ADALSQFHAAVDGDPDNYIAYYRRATVFLAMG------------KSKAALPDLTKVIALKMDFTA 72 (359)
T ss_dssp HHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHcCCH-HHHHHHHHHHHhhCcccHHHHHHHHHHHHHcc------------CHHHHHHHHHHHHHhCCCcch
Confidence 33444455678999 89999999999999999999999999999887 489999999999999999999
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCC---CChhhhhHH------------HHHHHHhCcChHHHHHHHHHHHHhc
Q 009766 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADS---RNFHAWNYR------------RFVAASMNRSEEDELKYTEDMICNN 171 (526)
Q Consensus 107 AW~HRrwvL~kl~~~~eeELe~~dkaLeiDp---rNyhAW~yR------------r~lL~~Lg~~~eeELe~tdkaI~~n 171 (526)
+|...+.++...+ .+++++..++++++.+| .+..+|... +.+....+.+ +++++++++++..+
T Consensus 73 ~~~~l~~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~-~~A~~~~~~~~~~~ 150 (359)
T 3ieg_A 73 ARLQRGHLLLKQG-KLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADY-TAAITFLDKILEVC 150 (359)
T ss_dssp HHHHHHHHHHHHT-CHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcC-ChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCH-HHHHHHHHHHHHhC
Confidence 9999999998874 89999999999999999 999998877 4566667777 58999999999999
Q ss_pred cCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcccc
Q 009766 172 FSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 172 PsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~ 235 (526)
|.+..+|..++.++..++. ++++++.+.+++..+|++..+|..+..++....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~------------~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 202 (359)
T 3ieg_A 151 VWDAELRELRAECFIKEGE------------PRKAISDLKAASKLKSDNTEAFYKISTLYYQLG 202 (359)
T ss_dssp TTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHHHHHCCC------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 9999999999999888765 689999999999999999999988877776643
No 30
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.44 E-value=3e-12 Score=120.20 Aligned_cols=154 Identities=14% Similarity=-0.045 Sum_probs=140.7
Q ss_pred CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q 009766 56 PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA 135 (526)
Q Consensus 56 Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei 135 (526)
|.+..+|+.++.++...+ .+++++..+++++..+|++..+|..++.++...+ .+++++..+++++++
T Consensus 2 p~~~~~~~~lg~~~~~~g------------~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g-~~~~A~~~~~~al~~ 68 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALG------------RYDAALTLFERALKENPQDPEALYWLARTQLKLG-LVNPALENGKTLVAR 68 (217)
T ss_dssp --CCHHHHHHHHHHHHTT------------CHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHh
Confidence 788899999999998886 4899999999999999999999999999999885 899999999999999
Q ss_pred CCCChhhhhHHHHHHHHh-----------CcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHH
Q 009766 136 DSRNFHAWNYRRFVAASM-----------NRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLP 204 (526)
Q Consensus 136 DprNyhAW~yRr~lL~~L-----------g~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eile 204 (526)
+|.+..+|...+.++... |.+ +++++.++++++.+|.+..+|..++.++..+++ ++
T Consensus 69 ~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~-~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~------------~~ 135 (217)
T 2pl2_A 69 TPRYLGGYMVLSEAYVALYRQAEDRERGKGYL-EQALSVLKDAERVNPRYAPLHLQRGLVYALLGE------------RD 135 (217)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HH
T ss_pred CCCcHHHHHHHHHHHHHhhhhhhhhcccccCH-HHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCC------------hH
Confidence 999999999999999999 888 489999999999999999999999999998875 79
Q ss_pred HHHHHHHHHHHhCCCCcccHHHHHHHHccccC
Q 009766 205 DEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 205 eELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
++++.+.+++.++ ++..+|+.+..++....+
T Consensus 136 ~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~ 166 (217)
T 2pl2_A 136 KAEASLKQALALE-DTPEIRSALAELYLSMGR 166 (217)
T ss_dssp HHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcc-cchHHHHHHHHHHHHcCC
Confidence 9999999999999 999999888887766544
No 31
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.44 E-value=7.6e-12 Score=115.33 Aligned_cols=177 Identities=15% Similarity=0.093 Sum_probs=154.4
Q ss_pred HHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC-------
Q 009766 32 LHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS------- 104 (526)
Q Consensus 32 ~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs------- 104 (526)
......|+| ++|+..+.+++..+ ++..+|..++.++..++ .+++++.++++++..+|++
T Consensus 13 ~~~~~~~~~-~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~------------~~~~A~~~~~~a~~~~~~~~~~~~~~ 78 (258)
T 3uq3_A 13 NKFYKARQF-DEAIEHYNKAWELH-KDITYLNNRAAAEYEKG------------EYETAISTLNDAVEQGREMRADYKVI 78 (258)
T ss_dssp HHHHHTTCH-HHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHhccH-HHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcc------------cHHHHHHHHHHHHHhCcccccchHHH
Confidence 344567889 89999999999999 99999999999999887 4899999999999999887
Q ss_pred hHHHHHHHHHHHhCCCChHHHHHHHHHHHH--------------------------hCCCChhhhhHHHHHHHHhCcChH
Q 009766 105 YGAWHHRKWILSKGHSSIDNELRLLDKFQK--------------------------ADSRNFHAWNYRRFVAASMNRSEE 158 (526)
Q Consensus 105 y~AW~HRrwvL~kl~~~~eeELe~~dkaLe--------------------------iDprNyhAW~yRr~lL~~Lg~~~e 158 (526)
..+|...+.++...+ .+++++++++++++ .+|.+..+|...+.+....|.+ +
T Consensus 79 ~~~~~~l~~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 156 (258)
T 3uq3_A 79 SKSFARIGNAYHKLG-DLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDW-P 156 (258)
T ss_dssp HHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCH-H
T ss_pred HHHHHHHHHHHHHcc-cHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCH-H
Confidence 688998988888874 88888888888888 7778888999999999888888 4
Q ss_pred HHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccccC
Q 009766 159 DELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 159 eELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
++++++++++..+|.+..+|..++.++..++. +++++..+.+++..+|++..+|..+..++.....
T Consensus 157 ~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~------------~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~ 222 (258)
T 3uq3_A 157 NAVKAYTEMIKRAPEDARGYSNRAAALAKLMS------------FPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKE 222 (258)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHhCC------------HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 79999999999999999999999999887764 6899999999999999999999888887766543
No 32
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.42 E-value=1.1e-12 Score=114.29 Aligned_cols=123 Identities=18% Similarity=0.102 Sum_probs=111.6
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHH
Q 009766 49 TKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRL 128 (526)
Q Consensus 49 ~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~ 128 (526)
.++..+||+...+|+.+|.++.+.+ .+++++.+++++|..+|++..+|..++.++.+++ .+++++..
T Consensus 3 ar~a~inP~~a~~~~~~G~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-~~~~A~~~ 69 (126)
T 4gco_A 3 ARLAYINPELAQEEKNKGNEYFKKG------------DYPTAMRHYNEAVKRDPENAILYSNRAACLTKLM-EFQRALDD 69 (126)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHH
T ss_pred hHHHHHCHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhc-cHHHHHHH
Confidence 3456689999999999999998887 5999999999999999999999999999999985 99999999
Q ss_pred HHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHH
Q 009766 129 LDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLL 185 (526)
Q Consensus 129 ~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL 185 (526)
++++++++|.+..+|..++.++..+|.+. +++++++++++.+|+|..++...+.+|
T Consensus 70 ~~~al~~~p~~~~a~~~lg~~~~~~~~~~-~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 70 CDTCIRLDSKFIKGYIRKAACLVAMREWS-KAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999999999999999994 899999999999999999987766553
No 33
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.41 E-value=6.4e-12 Score=117.96 Aligned_cols=176 Identities=12% Similarity=0.041 Sum_probs=155.2
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChH----
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG---- 106 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~---- 106 (526)
-......|+| ++|+..+.+++..+|++..+|..++.+...++ .+++++..+++++. .|.+..
T Consensus 10 a~~~~~~~~~-~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~------------~~~~A~~~~~~a~~-~~~~~~~~~~ 75 (272)
T 3u4t_A 10 ADFLFKNNNY-AEAIEVFNKLEAKKYNSPYIYNRRAVCYYELA------------KYDLAQKDIETYFS-KVNATKAKSA 75 (272)
T ss_dssp HHHHHTTTCH-HHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTT------------CHHHHHHHHHHHHT-TSCTTTCCHH
T ss_pred HHHHHHhcCH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh------------hHHHHHHHHHHHHh-ccCchhHHHH
Confidence 3344578889 89999999999999999999999999988886 48999999999999 555444
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHH-HHH
Q 009766 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRS-LLL 185 (526)
Q Consensus 107 AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~-~LL 185 (526)
+|..++.++...+ .+++++++++++++.+|.+..+|...+.+....|.+. +++++++++++.+|.+..+|.+++ .++
T Consensus 76 ~~~~lg~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~-~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 76 DFEYYGKILMKKG-QDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFP-LAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHH-HHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcc-cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHH-HHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 4899999998885 8999999999999999999999999999999999984 899999999999999999999999 554
Q ss_pred HHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcccc
Q 009766 186 SNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 186 ~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~ 235 (526)
... .++++++.+.+++..+|++..+|.++..++....
T Consensus 154 ~~~-------------~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~ 190 (272)
T 3u4t_A 154 YNK-------------EYVKADSSFVKVLELKPNIYIGYLWRARANAAQD 190 (272)
T ss_dssp HTT-------------CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHS
T ss_pred HHH-------------HHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC
Confidence 432 2799999999999999999999988888776653
No 34
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.41 E-value=3e-11 Score=118.11 Aligned_cols=177 Identities=9% Similarity=0.019 Sum_probs=130.9
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRK 112 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRr 112 (526)
.....|.+ ++|+..+.+++..+|++..+|..++.++...+ .+++++.++++++..+|++..+|...+
T Consensus 73 ~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~~~l~ 139 (368)
T 1fch_A 73 RRLQEGDL-PNAVLLFEAAVQQDPKHMEAWQYLGTTQAENE------------QELLAISALRRCLELKPDNQTALMALA 139 (368)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHCCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCc------------CHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 44466777 78888888888888888888888888888776 377888888888888888888888887
Q ss_pred HHHHhCCCChHHHHHHHHHHHHhCCC---------------------------------------------------Chh
Q 009766 113 WILSKGHSSIDNELRLLDKFQKADSR---------------------------------------------------NFH 141 (526)
Q Consensus 113 wvL~kl~~~~eeELe~~dkaLeiDpr---------------------------------------------------Nyh 141 (526)
.++...+ .++++++.++++++.+|. +..
T Consensus 140 ~~~~~~g-~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 218 (368)
T 1fch_A 140 VSFTNES-LQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPD 218 (368)
T ss_dssp HHHHHTT-CHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHH
T ss_pred HHHHHcC-CHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHH
Confidence 7777663 555555555555555554 445
Q ss_pred hhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCc
Q 009766 142 AWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQ 221 (526)
Q Consensus 142 AW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~De 221 (526)
+|...+.+....|.+ +++++++.+++..+|.+..+|..++.++..+++ ++++++.+.+++..+|++.
T Consensus 219 ~~~~l~~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~al~~~~~~~ 285 (368)
T 1fch_A 219 VQCGLGVLFNLSGEY-DKAVDCFTAALSVRPNDYLLWNKLGATLANGNQ------------SEEAVAAYRRALELQPGYI 285 (368)
T ss_dssp HHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcCCH-HHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHHhCCCcH
Confidence 555556666666666 367777777777777777777777777766654 6889999999999999999
Q ss_pred ccHHHHHHHHccccC
Q 009766 222 SGWFYHLWLLDQTVR 236 (526)
Q Consensus 222 SaW~Y~r~LL~~~~~ 236 (526)
.+|..+..++.....
T Consensus 286 ~~~~~l~~~~~~~g~ 300 (368)
T 1fch_A 286 RSRYNLGISCINLGA 300 (368)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCC
Confidence 888887777765433
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.41 E-value=1.1e-11 Score=124.96 Aligned_cols=184 Identities=11% Similarity=0.002 Sum_probs=157.6
Q ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC
Q 009766 25 RVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS 104 (526)
Q Consensus 25 r~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs 104 (526)
..+..........|+| ++|+.++.+++..+|++..+|+.++.++..++ .+++++..+++++..+|++
T Consensus 27 ~~~~~~~~~~~~~g~~-~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~p~~ 93 (450)
T 2y4t_A 27 EKHLELGKKLLAAGQL-ADALSQFHAAVDGDPDNYIAYYRRATVFLAMG------------KSKAALPDLTKVIQLKMDF 93 (450)
T ss_dssp HHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCccHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHhcCCCc
Confidence 3344444455678899 89999999999999999999999999998886 4899999999999999999
Q ss_pred hHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCCh---hhhhHH------------HHHHHHhCcChHHHHHHHHHHHH
Q 009766 105 YGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNF---HAWNYR------------RFVAASMNRSEEDELKYTEDMIC 169 (526)
Q Consensus 105 y~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNy---hAW~yR------------r~lL~~Lg~~~eeELe~tdkaI~ 169 (526)
..+|...+.++...+ .++++++.++++++.+|.+. .+|..- +.+....+.+ ++++++++++++
T Consensus 94 ~~~~~~l~~~~~~~g-~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~-~~A~~~~~~~~~ 171 (450)
T 2y4t_A 94 TAARLQRGHLLLKQG-KLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDY-TAAIAFLDKILE 171 (450)
T ss_dssp HHHHHHHHHHHHHTT-CHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHH
Confidence 999999999999885 89999999999999999988 777654 3445666777 489999999999
Q ss_pred hccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcccc
Q 009766 170 NNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 170 ~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~ 235 (526)
.+|.+..+|..++.++..++. ++++++.+.+++..+|++..+|+.+..++....
T Consensus 172 ~~~~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 225 (450)
T 2y4t_A 172 VCVWDAELRELRAECFIKEGE------------PRKAISDLKAASKLKNDNTEAFYKISTLYYQLG 225 (450)
T ss_dssp HCTTCHHHHHHHHHHHHHTTC------------GGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTT
T ss_pred hCCCChHHHHHHHHHHHHCCC------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 999999999999999888765 578889999999999999999988877776643
No 36
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.41 E-value=8.8e-12 Score=122.98 Aligned_cols=189 Identities=13% Similarity=0.073 Sum_probs=162.8
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCC----------CCch--------------------
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDS----------DPDS-------------------- 82 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~s----------dPe~-------------------- 82 (526)
.....|++ ++|+..+.+++.++|++..+|+..+.++..++..+.+ .|+.
T Consensus 108 ~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~ 186 (365)
T 4eqf_A 108 TQAENENE-QAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKS 186 (365)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-----------------
T ss_pred HHHHCCCH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHH
Confidence 34457888 8999999999999999999999999999888742211 1210
Q ss_pred --hhhhHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChH
Q 009766 83 --LKSILDEELRVVESALRQNFK--SYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEE 158 (526)
Q Consensus 83 --~~~~~~eEL~~~e~aL~~NPK--sy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~e 158 (526)
....+++++.++++++..+|+ +..+|...+.++...+ .+++++++++++++++|.+..+|...+.++...|.+.
T Consensus 187 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~- 264 (365)
T 4eqf_A 187 PVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSG-EFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSE- 264 (365)
T ss_dssp --CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-
T ss_pred HhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-
Confidence 135689999999999999999 8999999999998874 8999999999999999999999999999999999984
Q ss_pred HHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCC------------CcccHHH
Q 009766 159 DELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPD------------DQSGWFY 226 (526)
Q Consensus 159 eELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~------------DeSaW~Y 226 (526)
+++++++++++.+|.+..+|..++.++..+++ ++++++++.+++.++|+ +..+|..
T Consensus 265 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 332 (365)
T 4eqf_A 265 EAVEAYTRALEIQPGFIRSRYNLGISCINLGA------------YREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAA 332 (365)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHCC------------CHHHHH
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHCCC------------HHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHH
Confidence 89999999999999999999999999998875 69999999999999998 3678988
Q ss_pred HHHHHccccC
Q 009766 227 HLWLLDQTVR 236 (526)
Q Consensus 227 ~r~LL~~~~~ 236 (526)
++.++....+
T Consensus 333 l~~~~~~~g~ 342 (365)
T 4eqf_A 333 LRIALSLMDQ 342 (365)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCc
Confidence 8887766543
No 37
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.40 E-value=2.2e-12 Score=112.35 Aligned_cols=122 Identities=11% Similarity=0.013 Sum_probs=111.5
Q ss_pred HHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCCh
Q 009766 96 SALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175 (526)
Q Consensus 96 ~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNy 175 (526)
++..+||+...+|..++-.+.+.+ .|++++++++++++++|.|..+|.+++.++..+|.+. ++++.++++|+.+|.+.
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~-~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKG-DYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQ-RALDDCDTCIRLDSKFI 81 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCTTCH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHH-HHHHHHHHHHHhhhhhh
Confidence 456689999999999999999885 9999999999999999999999999999999999984 89999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHH
Q 009766 176 SAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231 (526)
Q Consensus 176 SAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL 231 (526)
.+|++++.++..++. ++++++.+.+++.++|+|..++.-++.+|
T Consensus 82 ~a~~~lg~~~~~~~~------------~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 82 KGYIRKAACLVAMRE------------WSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCC------------HHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999998875 79999999999999999999997766654
No 38
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.40 E-value=1.1e-11 Score=114.17 Aligned_cols=182 Identities=10% Similarity=0.012 Sum_probs=151.1
Q ss_pred HHHhhcCCCcHHHHHHHHHHHHhCCCc-------HHHHHHHHHHHHhhhcCCCC----------CCch----hhhhHHHH
Q 009766 32 LHNHHNHIYSKEAVELSTKLLETNPEL-------YTAWNYRKLAVQHKLTENDS----------DPDS----LKSILDEE 90 (526)
Q Consensus 32 ~~~~~~geyseEAL~lt~kaL~iNPd~-------ytAWN~Rr~vL~~L~~~~~s----------dPe~----~~~~~~eE 90 (526)
......|++ ++|+..+.+++.++|++ ..+|...+.++..++....+ +|+. ....++++
T Consensus 46 ~~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a 124 (258)
T 3uq3_A 46 AAEYEKGEY-ETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKE 124 (258)
T ss_dssp HHHHHTTCH-HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHcccH-HHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHH
Confidence 345567888 89999999999999988 79999999999888641110 1100 01334555
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHh
Q 009766 91 LRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICN 170 (526)
Q Consensus 91 L~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~ 170 (526)
+..+++++..+|.+..+|..++.++...+ .+++++..++++++.+|.+..+|...+.+....+.+ ++++++++++++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~-~~A~~~~~~al~~ 202 (258)
T 3uq3_A 125 LKKAEAEAYVNPEKAEEARLEGKEYFTKS-DWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSF-PEAIADCNKAIEK 202 (258)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHh
Confidence 55555555699999999999999998885 899999999999999999999999999999999998 4899999999999
Q ss_pred ccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhC------CCCcccHHHHH
Q 009766 171 NFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTD------PDDQSGWFYHL 228 (526)
Q Consensus 171 nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~d------P~DeSaW~Y~r 228 (526)
+|.+..+|..++.++..++. ++++++.+.+++.++ |++..++....
T Consensus 203 ~~~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~ 254 (258)
T 3uq3_A 203 DPNFVRAYIRKATAQIAVKE------------YASALETLDAARTKDAEVNNGSSAREIDQLYY 254 (258)
T ss_dssp CTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhh------------HHHHHHHHHHHHHhChhhcCCCchHHHHHHHH
Confidence 99999999999999988875 699999999999999 99888776543
No 39
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.39 E-value=1.1e-12 Score=116.94 Aligned_cols=140 Identities=5% Similarity=-0.114 Sum_probs=126.6
Q ss_pred hcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 009766 36 HNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWIL 115 (526)
Q Consensus 36 ~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL 115 (526)
.+|++ ++|+..+.+++..+|++..+|...+.+....+ .+++++.+++++|..+|++..+|..++.++
T Consensus 9 ~~~~~-e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~------------~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 75 (150)
T 4ga2_A 9 SKADV-ERYIASVQGSTPSPRQKSIKGFYFAKLYYEAK------------EYDLAKKYICTYINVQERDPKAHRFLGLLY 75 (150)
T ss_dssp CHHHH-HHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcChH-HHHHHHHHHhcccCcccHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 44666 89999999999999999999999999998886 489999999999999999999999999999
Q ss_pred HhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhh
Q 009766 116 SKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLL 189 (526)
Q Consensus 116 ~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~ 189 (526)
...+ .+++++.++.++++++|.+..+|...+.++...+.+.+....+++++++.+|.|..+|..|+.++...+
T Consensus 76 ~~~~-~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G 148 (150)
T 4ga2_A 76 ELEE-NTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEG 148 (150)
T ss_dssp HHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCC
T ss_pred HHcC-chHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhC
Confidence 9985 899999999999999999999999999999999988633444579999999999999999998877543
No 40
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.38 E-value=2.5e-11 Score=105.61 Aligned_cols=166 Identities=11% Similarity=0.030 Sum_probs=150.4
Q ss_pred HHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHH
Q 009766 32 LHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHR 111 (526)
Q Consensus 32 ~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HR 111 (526)
......|++ ++|+..+.+++..+|++..+|...+.++...+ .+++++.++++++..+|.+..+|...
T Consensus 16 ~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~~ 82 (186)
T 3as5_A 16 ISHAKAGRY-SQAVMLLEQVYDADAFDVDVALHLGIAYVKTG------------AVDRGTELLERSLADAPDNVKVATVL 82 (186)
T ss_dssp HHHHHHTCH-HHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHhcCH-HHHHHHHHHHHHhCccChHHHHHHHHHHHHcC------------CHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 344567888 89999999999999999999999999988876 48999999999999999999999999
Q ss_pred HHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhh
Q 009766 112 KWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKR 191 (526)
Q Consensus 112 rwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~ 191 (526)
+.++...+ .+++++++++++++.+|.+..+|...+.+....+.+ +++++++.+++..+|.+..+|...+.++...+.
T Consensus 83 a~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~- 159 (186)
T 3as5_A 83 GLTYVQVQ-KYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRF-DEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGR- 159 (186)
T ss_dssp HHHHHHHT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHhc-CHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcH-HHHHHHHHHHHhcCccchHHHHHHHHHHHHcCC-
Confidence 99988774 899999999999999999999999999999999988 489999999999999999999999999887764
Q ss_pred hccCccchhhhHHHHHHHHHHHHHhCCCCcccH
Q 009766 192 KVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGW 224 (526)
Q Consensus 192 ~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW 224 (526)
++++++++.+++..+|++....
T Consensus 160 -----------~~~A~~~~~~~~~~~~~~~~~~ 181 (186)
T 3as5_A 160 -----------HEEALPHFKKANELDEGASVEL 181 (186)
T ss_dssp -----------HHHHHHHHHHHHHHHHCCCGGG
T ss_pred -----------HHHHHHHHHHHHHcCCCchhhH
Confidence 6999999999999999887543
No 41
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.37 E-value=5.1e-11 Score=116.51 Aligned_cols=190 Identities=14% Similarity=0.067 Sum_probs=164.2
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCC----------CCCch--------------------
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTEND----------SDPDS-------------------- 82 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~----------sdPe~-------------------- 82 (526)
.....|.+ ++|+..+.+++.++|++..+|...+.++...+..+. ..|+.
T Consensus 107 ~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
T 1fch_A 107 TQAENEQE-LLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSK 185 (368)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------
T ss_pred HHHHCcCH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHH
Confidence 34467888 899999999999999999999999999888764211 11211
Q ss_pred -------hhhhHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHh
Q 009766 83 -------LKSILDEELRVVESALRQNFK--SYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASM 153 (526)
Q Consensus 83 -------~~~~~~eEL~~~e~aL~~NPK--sy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~L 153 (526)
....+++++.++++++..+|. +..+|...+.++...+ .+++++.+++++++++|.+..+|...+.+....
T Consensus 186 ~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 264 (368)
T 1fch_A 186 RILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSG-EYDKAVDCFTAALSVRPNDYLLWNKLGATLANG 264 (368)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHc
Confidence 125678999999999999999 8899999999998874 899999999999999999999999999999999
Q ss_pred CcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCC-----------cc
Q 009766 154 NRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDD-----------QS 222 (526)
Q Consensus 154 g~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~D-----------eS 222 (526)
|.+ +++++++++++..+|.+..+|..++.++..++. ++++++.+.+++..+|++ ..
T Consensus 265 g~~-~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 331 (368)
T 1fch_A 265 NQS-EEAVAAYRRALELQPGYIRSRYNLGISCINLGA------------HREAVEHFLEALNMQRKSRGPRGEGGAMSEN 331 (368)
T ss_dssp TCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC------------HHHHHHHHHHHHHHHHTC------CCCCCHH
T ss_pred CCH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCC------------HHHHHHHHHHHHHhCCCCCCccccccchhhH
Confidence 998 489999999999999999999999999988875 799999999999999998 78
Q ss_pred cHHHHHHHHccccCC
Q 009766 223 GWFYHLWLLDQTVRV 237 (526)
Q Consensus 223 aW~Y~r~LL~~~~~~ 237 (526)
+|..+..++....+.
T Consensus 332 ~~~~l~~~~~~~g~~ 346 (368)
T 1fch_A 332 IWSTLRLALSMLGQS 346 (368)
T ss_dssp HHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHhCCh
Confidence 998888888776543
No 42
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.36 E-value=2e-10 Score=110.44 Aligned_cols=176 Identities=11% Similarity=-0.026 Sum_probs=117.1
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHH
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHH 110 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~H 110 (526)
.......|.+ ++|+..+.+++..+|++..+|..++.++..++ .+++++..++.++..+|++..+|..
T Consensus 127 a~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3ieg_A 127 ALDAFDGADY-TAAITFLDKILEVCVWDAELRELRAECFIKEG------------EPRKAISDLKAASKLKSDNTEAFYK 193 (359)
T ss_dssp HHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHTTCSCCHHHHHH
T ss_pred HHHHHHccCH-HHHHHHHHHHHHhCCCchHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 3455567888 88999999999999999999999999888876 3677777777777777777777777
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHH------------HHHHHHhCcChHHHHHHHHHHHHhccCChhH-
Q 009766 111 RKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYR------------RFVAASMNRSEEDELKYTEDMICNNFSNYSA- 177 (526)
Q Consensus 111 RrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yR------------r~lL~~Lg~~~eeELe~tdkaI~~nPsNySA- 177 (526)
.+.++...+ .+++++..++++++.+|.+..+|.+. +.++...+.+ +++++.+++++..+|.+...
T Consensus 194 la~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~ 271 (359)
T 3ieg_A 194 ISTLYYQLG-DHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRY-TDATSKYESVMKTEPSVAEYT 271 (359)
T ss_dssp HHHHHHHHT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCCSSHHHH
T ss_pred HHHHHHHcC-CHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHhcCCCchHHH
Confidence 776666653 66777777777777777776666543 3334444555 35666666666666666533
Q ss_pred ---HHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 178 ---WHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 178 ---W~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
|..++.++..++. ++++++.+.+++..+|++..+|..+..++..
T Consensus 272 ~~~~~~la~~~~~~~~------------~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (359)
T 3ieg_A 272 VRSKERICHCFSKDEK------------PVEAIRICSEVLQMEPDNVNALKDRAEAYLI 318 (359)
T ss_dssp HHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccC------------HHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 2234444444332 4666666666666666666666555555544
No 43
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.36 E-value=2.7e-11 Score=113.74 Aligned_cols=170 Identities=8% Similarity=-0.040 Sum_probs=100.6
Q ss_pred hcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHH-HH
Q 009766 36 HNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRK-WI 114 (526)
Q Consensus 36 ~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRr-wv 114 (526)
..|++ ++|+..+.+++.++|++..+|...+.+....+ .+++++.++++++..+|.+..+|..++ .+
T Consensus 86 ~~~~~-~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~------------~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 152 (272)
T 3u4t_A 86 KKGQD-SLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKG------------NFPLAIQYMEKQIRPTTTDPKVFYELGQAY 152 (272)
T ss_dssp HTTCH-HHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT------------CHHHHHHHHGGGCCSSCCCHHHHHHHHHHH
T ss_pred HcccH-HHHHHHHHHHHhcCcccHHHHHHHHHHHHHcc------------CHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 34555 55666666666666666666666666555554 356666666666666666666666665 33
Q ss_pred HHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCc---ChHHHHHHHHHHHHhc---cCC-----hhHHHHHHH
Q 009766 115 LSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNR---SEEDELKYTEDMICNN---FSN-----YSAWHNRSL 183 (526)
Q Consensus 115 L~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~---~~eeELe~tdkaI~~n---PsN-----ySAW~yR~~ 183 (526)
.... .++++++.++++++++|.+..+|..++.+...++. +. +++.+++++++.. |.. ..+|.+.+.
T Consensus 153 ~~~~--~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 229 (272)
T 3u4t_A 153 YYNK--EYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQG-LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAY 229 (272)
T ss_dssp HHTT--CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSC-TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhH-HHHHHHHHHHHHHhcccccchHHHHHHHHHHHH
Confidence 3332 55666666666666666666666666666555554 32 3555555555543 331 134555555
Q ss_pred HHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 184 LLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 184 LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
+....+. ++++++++.+++.++|+|..+|--.+.+...
T Consensus 230 ~~~~~~~------------~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~ 267 (272)
T 3u4t_A 230 YYTINRD------------KVKADAAWKNILALDPTNKKAIDGLKMKLEH 267 (272)
T ss_dssp HHHHTTC------------HHHHHHHHHHHHHHCTTCHHHHHHHC-----
T ss_pred HHHHcCC------------HHHHHHHHHHHHhcCccHHHHHHHhhhhhcc
Confidence 5444432 6999999999999999999999766655544
No 44
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.35 E-value=4.8e-11 Score=113.86 Aligned_cols=173 Identities=13% Similarity=0.003 Sum_probs=102.1
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRK 112 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRr 112 (526)
.....|++ ++|+.++.+++..+|++..+|..++.++...+ .+++++.++++++..+|++..+|...+
T Consensus 30 ~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------------~~~~A~~~~~~a~~~~~~~~~~~~~la 96 (327)
T 3cv0_A 30 SMLKLANL-AEAALAFEAVCQAAPEREEAWRSLGLTQAENE------------KDGLAIIALNHARMLDPKDIAVHAALA 96 (327)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHhccH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHhcCcCCHHHHHHHH
Confidence 44456777 67777777777778877777777777777665 367777777777777777777777777
Q ss_pred HHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHH--------------HH-HHHHhCcChHHHHHHHHHHHHhccCChhH
Q 009766 113 WILSKGHSSIDNELRLLDKFQKADSRNFHAWNYR--------------RF-VAASMNRSEEDELKYTEDMICNNFSNYSA 177 (526)
Q Consensus 113 wvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yR--------------r~-lL~~Lg~~~eeELe~tdkaI~~nPsNySA 177 (526)
.++...+ .++++++.++++++.+|.+..+|... +- +....+.+ +++++++.+++..+|.+..+
T Consensus 97 ~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~ 174 (327)
T 3cv0_A 97 VSHTNEH-NANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEY-RECRTLLHAALEMNPNDAQL 174 (327)
T ss_dssp HHHHHTT-CHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHH-HHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHcC-CHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccH-HHHHHHHHHHHhhCCCCHHH
Confidence 7666653 56666666666666666665555544 11 12222223 34555555555555555555
Q ss_pred HHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHc
Q 009766 178 WHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLD 232 (526)
Q Consensus 178 W~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~ 232 (526)
|...+.++...+. ++++++.+.+++..+|++..+|..+..++.
T Consensus 175 ~~~la~~~~~~~~------------~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 217 (327)
T 3cv0_A 175 HASLGVLYNLSNN------------YDSAAANLRRAVELRPDDAQLWNKLGATLA 217 (327)
T ss_dssp HHHHHHHHHHTTC------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc------------HHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 5555555554433 345555555555555555555544444443
No 45
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.34 E-value=2.5e-11 Score=112.56 Aligned_cols=152 Identities=7% Similarity=-0.096 Sum_probs=136.6
Q ss_pred CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 009766 56 PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNF-KSYGAWHHRKWILSKGHSSIDNELRLLDKFQK 134 (526)
Q Consensus 56 Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NP-Ksy~AW~HRrwvL~kl~~~~eeELe~~dkaLe 134 (526)
+.+..+|..++.++...+ .+++++.++++++..+| ++..+|+.++.+....+ .+++++.+++++++
T Consensus 4 ~~~~~~~~~~g~~~~~~~------------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~ 70 (228)
T 4i17_A 4 TTDPNQLKNEGNDALNAK------------NYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIK-KYKEAADYFDIAIK 70 (228)
T ss_dssp CCCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcc------------CHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhh-cHHHHHHHHHHHHH
Confidence 456689999999998886 58999999999999999 99999999999999885 99999999999999
Q ss_pred hCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCCh-------hHHHHHHHHHHHhhhhhccCccchhhhHHHHH
Q 009766 135 ADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY-------SAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEY 207 (526)
Q Consensus 135 iDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNy-------SAW~yR~~LL~~L~~~~~~g~~~~~eileeEL 207 (526)
.+|.+..+|..++.+...++.+. ++++.++++++.+|.|. .+|..++.++..++. +++++
T Consensus 71 ~~p~~~~~~~~l~~~~~~~~~~~-~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~A~ 137 (228)
T 4i17_A 71 KNYNLANAYIGKSAAYRDMKNNQ-EYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGN------------IEKAE 137 (228)
T ss_dssp TTCSHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTC------------HHHHH
T ss_pred hCcchHHHHHHHHHHHHHcccHH-HHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhcc------------HHHHH
Confidence 99999999999999999999984 89999999999999999 567777777766654 79999
Q ss_pred HHHHHHHHhCCC--CcccHHHHHHHHcc
Q 009766 208 EFVHQAIFTDPD--DQSGWFYHLWLLDQ 233 (526)
Q Consensus 208 e~v~~AI~~dP~--DeSaW~Y~r~LL~~ 233 (526)
+.+.+++..+|+ +..+|..++.++..
T Consensus 138 ~~~~~al~~~p~~~~~~~~~~l~~~~~~ 165 (228)
T 4i17_A 138 ENYKHATDVTSKKWKTDALYSLGVLFYN 165 (228)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcccHHHHHHHHHHHHH
Confidence 999999999999 88999887777644
No 46
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.34 E-value=2.8e-11 Score=127.70 Aligned_cols=176 Identities=10% Similarity=0.023 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhH-HHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCC
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSIL-DEELRVVESALRQNFKSYGAWHHRKWILSKGHS 120 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~-~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~ 120 (526)
++++..+..++...|+...+|..++.++...+ .+ ++++.++++++..+|++..+|+..+.++...+
T Consensus 85 ~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g------------~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g- 151 (474)
T 4abn_A 85 EKTLQQMEEVLGSAQVEAQALMLKGKALNVTP------------DYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKG- 151 (474)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSS------------SCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHhcc------------ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-
Confidence 57888888999999999999999999998876 47 99999999999999999999999999999884
Q ss_pred ChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHh---------CcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhh
Q 009766 121 SIDNELRLLDKFQKADSRNFHAWNYRRFVAASM---------NRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKR 191 (526)
Q Consensus 121 ~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~L---------g~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~ 191 (526)
.+++++++++++++++|. ..+|...+.++..+ +.+ +++++++.++++.+|.|..+|+.++.++..+.-.
T Consensus 152 ~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~ 229 (474)
T 4abn_A 152 DVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQLQTDSGDEHSRHV-MDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFN 229 (474)
T ss_dssp CHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHhccCChhhhhhhH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHh
Confidence 899999999999999998 79999999999988 777 4899999999999999999999999999877100
Q ss_pred hccCccchhhhHHHHHHHHHHHHHhCC---CCcccHHHHHHHHccccC
Q 009766 192 KVEGFVSKEKVLPDEYEFVHQAIFTDP---DDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 192 ~~~g~~~~~eileeELe~v~~AI~~dP---~DeSaW~Y~r~LL~~~~~ 236 (526)
.+. ....++++++++.+++.++| ++..+|+.+..++....+
T Consensus 230 --~~~--~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~ 273 (474)
T 4abn_A 230 --TGQ--NPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEES 273 (474)
T ss_dssp --TTC--CHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTC
T ss_pred --hcc--ccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCC
Confidence 000 11237999999999999999 999999988888766543
No 47
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.34 E-value=2.8e-11 Score=129.03 Aligned_cols=162 Identities=9% Similarity=-0.126 Sum_probs=133.9
Q ss_pred cCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 009766 37 NHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116 (526)
Q Consensus 37 ~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~ 116 (526)
.|++ ++|+..+.+++..+|++..+|+..+.++...+ .+++++..+++++..+|++..+|...+.++.
T Consensus 2 ~g~~-~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 68 (568)
T 2vsy_A 2 TADG-PRELLQLRAAVRHRPQDFVAWLMLADAELGMG------------DTTAGEMAVQRGLALHPGHPEAVARLGRVRW 68 (568)
T ss_dssp --------------------CCHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHTTSTTCHHHHHHHHHHHH
T ss_pred CccH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3667 79999999999999999999999999998886 4899999999999999999999999999999
Q ss_pred hCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHh---hhhhc
Q 009766 117 KGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNL---LKRKV 193 (526)
Q Consensus 117 kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L---~~~~~ 193 (526)
..+ .+++++++++++++++|.+..+|...+.++..+|.+ ++++++++++++.+|.+..+|...+.++..+ +.
T Consensus 69 ~~g-~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~--- 143 (568)
T 2vsy_A 69 TQQ-RHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQA-EAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRA--- 143 (568)
T ss_dssp HTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTT---
T ss_pred HCC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcccc---
Confidence 885 899999999999999999999999999999999998 4899999999999999999999999998887 43
Q ss_pred cCccchhhhHHHHHHHHHHHHHhCCCCcccHH
Q 009766 194 EGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWF 225 (526)
Q Consensus 194 ~g~~~~~eileeELe~v~~AI~~dP~DeSaW~ 225 (526)
++++++.+.+++..+|++..+|.
T Consensus 144 ---------~~~A~~~~~~al~~~p~~~~~~~ 166 (568)
T 2vsy_A 144 ---------LDVLSAQVRAAVAQGVGAVEPFA 166 (568)
T ss_dssp ---------HHHHHHHHHHHHHHTCCCSCHHH
T ss_pred ---------HHHHHHHHHHHHhcCCcccChHH
Confidence 69999999999999999988774
No 48
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.33 E-value=1.7e-10 Score=104.04 Aligned_cols=168 Identities=13% Similarity=-0.052 Sum_probs=147.7
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhh-hcCCCCCCchhhhhHHHHHHHHHHHHH--hCCCChHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHK-LTENDSDPDSLKSILDEELRVVESALR--QNFKSYGAWH 109 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L-~~~~~sdPe~~~~~~~eEL~~~e~aL~--~NPKsy~AW~ 109 (526)
.....|++ ++|+..+.+++..+|++..+|...+.++... + .+++++.++++++. .+|.+..+|.
T Consensus 51 ~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~~ 117 (225)
T 2vq2_A 51 IYQYLKVN-DKAQESFRQALSIKPDSAEINNNYGWFLCGRLN------------RPAESMAYFDKALADPTYPTPYIANL 117 (225)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC------------CHHHHHHHHHHHHTSTTCSCHHHHHH
T ss_pred HHHHcCCh-HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcC------------cHHHHHHHHHHHHcCcCCcchHHHHH
Confidence 34467888 8999999999999999999999999998887 6 48999999999999 7788899999
Q ss_pred HHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhcc-CChhHHHHHHHHHHHh
Q 009766 110 HRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNF-SNYSAWHNRSLLLSNL 188 (526)
Q Consensus 110 HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nP-sNySAW~yR~~LL~~L 188 (526)
..+.++...+ .+++++.+++++++.+|.+..+|...+.+....|.+ ++++++++++++.+| .+..+|.....+....
T Consensus 118 ~l~~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (225)
T 2vq2_A 118 NKGICSAKQG-QFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQL-GDADYYFKKYQSRVEVLQADDLLLGWKIAKAL 195 (225)
T ss_dssp HHHHHHHHTT-CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcC-CHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999998885 899999999999999999999999999999999998 489999999999999 9988887666665554
Q ss_pred hhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHH
Q 009766 189 LKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYH 227 (526)
Q Consensus 189 ~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~ 227 (526)
+. .+++..++..++..+|++..++.+.
T Consensus 196 ~~------------~~~a~~~~~~~~~~~p~~~~~~~~l 222 (225)
T 2vq2_A 196 GN------------AQAAYEYEAQLQANFPYSEELQTVL 222 (225)
T ss_dssp TC------------HHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred Cc------------HHHHHHHHHHHHHhCCCCHHHHHHh
Confidence 43 5778888888888999999887664
No 49
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.33 E-value=6.2e-12 Score=112.03 Aligned_cols=137 Identities=10% Similarity=0.020 Sum_probs=123.8
Q ss_pred hhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHH
Q 009766 84 KSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKY 163 (526)
Q Consensus 84 ~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~ 163 (526)
+..+++++..+..++..+|++..+|.+.+.+..+.+ .+++++++++++++++|+|..+|..++.+...++.+. +++++
T Consensus 10 ~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~-~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~-~A~~~ 87 (150)
T 4ga2_A 10 KADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAK-EYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTD-KAVEC 87 (150)
T ss_dssp HHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHH
T ss_pred cChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchH-HHHHH
Confidence 357899999999999999999999999999998885 9999999999999999999999999999999999984 89999
Q ss_pred HHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHH-HHHHHHhCCCCcccHHHHHHHHccc
Q 009766 164 TEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEF-VHQAIFTDPDDQSGWFYHLWLLDQT 234 (526)
Q Consensus 164 tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~-v~~AI~~dP~DeSaW~Y~r~LL~~~ 234 (526)
+.++|+.+|+|..+|...+.++..+++ +.+++.. +++|+.++|++..+|..+..|+...
T Consensus 88 ~~~al~~~p~~~~~~~~la~~~~~~~~------------~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~ 147 (150)
T 4ga2_A 88 YRRSVELNPTQKDLVLKIAELLCKNDV------------TDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCE 147 (150)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHCS------------SSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCC------------hHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999888764 3455554 5899999999999998888887653
No 50
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.33 E-value=1.7e-10 Score=107.27 Aligned_cols=168 Identities=8% Similarity=-0.122 Sum_probs=152.3
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHH--hCCCChHHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALR--QNFKSYGAWHH 110 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~--~NPKsy~AW~H 110 (526)
.....|++ ++|+..+.+++..+|++..+|...+.++...+ .+++++.++++++. .+|.+..+|..
T Consensus 80 ~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g------------~~~~A~~~~~~~~~~~~~~~~~~~~~~ 146 (252)
T 2ho1_A 80 VFQTEMEP-KLADEEYRKALASDSRNARVLNNYGGFLYEQK------------RYEEAYQRLLEASQDTLYPERSRVFEN 146 (252)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHTTCTTCTTHHHHHHH
T ss_pred HHHHcCCH-HHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHh------------HHHHHHHHHHHHHhCccCcccHHHHHH
Confidence 34467888 89999999999999999999999999988876 48999999999999 89999999999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhh
Q 009766 111 RKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLK 190 (526)
Q Consensus 111 RrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~ 190 (526)
.+.++...+ .+++++++++++++.+|.+..+|...+.+....+.+ +++++++.++++.+|.+..+|...+.++...+.
T Consensus 147 la~~~~~~g-~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 224 (252)
T 2ho1_A 147 LGLVSLQMK-KPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREY-VPARQYYDLFAQGGGQNARSLLLGIRLAKVFED 224 (252)
T ss_dssp HHHHHHHTT-CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcC-CHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccC
Confidence 999998884 899999999999999999999999999999999988 489999999999999999999988888877664
Q ss_pred hhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHH
Q 009766 191 RKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYH 227 (526)
Q Consensus 191 ~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~ 227 (526)
++++++.+.+++..+|++..++.+.
T Consensus 225 ------------~~~A~~~~~~~~~~~p~~~~~~~~l 249 (252)
T 2ho1_A 225 ------------RDTAASYGLQLKRLYPGSLEYQEFQ 249 (252)
T ss_dssp ------------HHHHHHHHHHHHHHCTTSHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 6899999999999999999877653
No 51
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.33 E-value=1.9e-10 Score=115.80 Aligned_cols=183 Identities=10% Similarity=-0.004 Sum_probs=98.6
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCC----------CCch------------hhhhHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDS----------DPDS------------LKSILDEE 90 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~s----------dPe~------------~~~~~~eE 90 (526)
.....|.+ ++|+..+.+++..+|++..+|+.++.++...+..+.+ +|+. ....++++
T Consensus 152 ~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 230 (450)
T 2y4t_A 152 NAFGSGDY-TAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELS 230 (450)
T ss_dssp HHHHHTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCH-HHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 34456777 7888888888888888888888888887777631110 0000 01234555
Q ss_pred HHHHHHHHHhCCCChHHHHHH------------HHHHHhCCCChHHHHHHHHHHHHhCCCC----hhhhhHHHHHHHHhC
Q 009766 91 LRVVESALRQNFKSYGAWHHR------------KWILSKGHSSIDNELRLLDKFQKADSRN----FHAWNYRRFVAASMN 154 (526)
Q Consensus 91 L~~~e~aL~~NPKsy~AW~HR------------rwvL~kl~~~~eeELe~~dkaLeiDprN----yhAW~yRr~lL~~Lg 154 (526)
+..+++++..+|.+..+|... +.++... +.+++++.+++++++++|.+ ..+|...+.++..+|
T Consensus 231 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g 309 (450)
T 2y4t_A 231 LSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRD-GRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDE 309 (450)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCC
Confidence 555555555555555544433 2233222 24555555555555555554 224444445554455
Q ss_pred cChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHH
Q 009766 155 RSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWL 230 (526)
Q Consensus 155 ~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~L 230 (526)
.+ +++++++++++..+|.+..+|..++.++..+++ ++++++.+.+++.++|++..+|..+..+
T Consensus 310 ~~-~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~------------~~~A~~~~~~al~~~p~~~~~~~~l~~~ 372 (450)
T 2y4t_A 310 KP-VEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEM------------YDEAIQDYETAQEHNENDQQIREGLEKA 372 (450)
T ss_dssp CH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred CH-HHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcC------------HHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 44 245555555555555555555555555544432 4555566666666666655555444443
No 52
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.32 E-value=1.4e-10 Score=110.20 Aligned_cols=182 Identities=10% Similarity=-0.083 Sum_probs=151.4
Q ss_pred HHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCC
Q 009766 26 VLQSQFLHNHHNHIYSKEAVELSTKLLETNPEL---YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNF 102 (526)
Q Consensus 26 ~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~---ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NP 102 (526)
.+...-......|+| ++|+..+.++|..+|++ ..+|..++.+...++ .+.+++..+++++..+|
T Consensus 17 ~~~~~a~~~~~~g~~-~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~------------~~~~A~~~~~~~l~~~p 83 (261)
T 3qky_A 17 EAFERAMEFYNQGKY-DRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNK------------EYLLAASEYERFIQIYQ 83 (261)
T ss_dssp HHHHHHHHHHHTTCH-HHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhCCH-HHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhC------------cHHHHHHHHHHHHHHCC
Confidence 344444556678999 89999999999999999 899999999999887 48999999999999988
Q ss_pred CC---hHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHhCCCChhhh-----------------hHHHHHHHHhC
Q 009766 103 KS---YGAWHHRKWILSK--------GHSSIDNELRLLDKFQKADSRNFHAW-----------------NYRRFVAASMN 154 (526)
Q Consensus 103 Ks---y~AW~HRrwvL~k--------l~~~~eeELe~~dkaLeiDprNyhAW-----------------~yRr~lL~~Lg 154 (526)
++ ..+|+.++.++.. . +.+++++..++++++.+|.+..++ ..++.+....|
T Consensus 84 ~~~~~~~a~~~lg~~~~~~~~~~~~~~-~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g 162 (261)
T 3qky_A 84 IDPRVPQAEYERAMCYYKLSPPYELDQ-TDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRE 162 (261)
T ss_dssp TCTTHHHHHHHHHHHHHHHCCCTTSCC-HHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCchhHHHHHHHHHHHHHhcccccccc-hhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 55 6789999999887 5 478999999999999999998888 67788888889
Q ss_pred cChHHHHHHHHHHHHhccCC---hhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccH
Q 009766 155 RSEEDELKYTEDMICNNFSN---YSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGW 224 (526)
Q Consensus 155 ~~~eeELe~tdkaI~~nPsN---ySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW 224 (526)
.+ ++++..++++++.+|.+ ..+|...+.++..++.... .....+.+++++..+.+++..+|++..+.
T Consensus 163 ~~-~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~--~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 232 (261)
T 3qky_A 163 LY-EAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSV--RARQPERYRRAVELYERLLQIFPDSPLLR 232 (261)
T ss_dssp CH-HHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSC--GGGHHHHHHHHHHHHHHHHHHCTTCTHHH
T ss_pred CH-HHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccch--hhcccchHHHHHHHHHHHHHHCCCChHHH
Confidence 88 48999999999999984 5689999999888754210 00122457999999999999999996443
No 53
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.31 E-value=6.2e-11 Score=113.10 Aligned_cols=189 Identities=15% Similarity=0.108 Sum_probs=161.9
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCC----------CCCc---------------------
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTEND----------SDPD--------------------- 81 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~----------sdPe--------------------- 81 (526)
.....|++ ++|+..+.+++..+|++..+|...+.++...+..+. .+|+
T Consensus 64 ~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (327)
T 3cv0_A 64 TQAENEKD-GLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQ 142 (327)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC-----------------
T ss_pred HHHHcCCH-HHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHH
Confidence 44467888 899999999999999999999998888877653211 1111
Q ss_pred ------hhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCc
Q 009766 82 ------SLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNR 155 (526)
Q Consensus 82 ------~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~ 155 (526)
.....+++++.++++++..+|.+..+|...+.++...+ .+++++.+++++++.+|.+..+|...+.+....+.
T Consensus 143 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 221 (327)
T 3cv0_A 143 SEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSN-NYDSAAANLRRAVELRPDDAQLWNKLGATLANGNR 221 (327)
T ss_dssp ---CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 01356799999999999999999999999999998885 89999999999999999999999999999999998
Q ss_pred ChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCC------------Cccc
Q 009766 156 SEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPD------------DQSG 223 (526)
Q Consensus 156 ~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~------------DeSa 223 (526)
+ ++++++++++++.+|.+..+|...+.++..++. ++++++.+.+++..+|+ +..+
T Consensus 222 ~-~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 288 (327)
T 3cv0_A 222 P-QEALDAYNRALDINPGYVRVMYNMAVSYSNMSQ------------YDLAAKQLVRAIYMQVGGTTPTGEASREATRSM 288 (327)
T ss_dssp H-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHTTSCC-----CCTHHHHH
T ss_pred H-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcc------------HHHHHHHHHHHHHhCCccccccccchhhcCHHH
Confidence 8 489999999999999999999999999887764 79999999999999999 7889
Q ss_pred HHHHHHHHccccC
Q 009766 224 WFYHLWLLDQTVR 236 (526)
Q Consensus 224 W~Y~r~LL~~~~~ 236 (526)
|..+..++.....
T Consensus 289 ~~~l~~~~~~~g~ 301 (327)
T 3cv0_A 289 WDFFRMLLNVMNR 301 (327)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC
Confidence 9888888766543
No 54
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.31 E-value=1.3e-10 Score=121.70 Aligned_cols=183 Identities=7% Similarity=-0.041 Sum_probs=119.7
Q ss_pred HhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCC----------CCCch------------hhhhHHHHH
Q 009766 34 NHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTEND----------SDPDS------------LKSILDEEL 91 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~----------sdPe~------------~~~~~~eEL 91 (526)
..+.|.+ ++|+..+.+++.++|++..+|+....++...+..++ ..|+. ....+++++
T Consensus 383 ~~~~g~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 461 (597)
T 2xpi_A 383 YLCVNKI-SEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLAN 461 (597)
T ss_dssp HHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHhccH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHH
Confidence 3455666 677777777777777777777777776666653110 01110 013466666
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh------CCCC-hhhhhHHHHHHHHhCcChHHHHHHH
Q 009766 92 RVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA------DSRN-FHAWNYRRFVAASMNRSEEDELKYT 164 (526)
Q Consensus 92 ~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei------DprN-yhAW~yRr~lL~~Lg~~~eeELe~t 164 (526)
+++++++..+|++..+|.....++.+.+ .+++++++++++++. +|.+ ..+|...+.++...|.+ +++++.+
T Consensus 462 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~-~~A~~~~ 539 (597)
T 2xpi_A 462 EYLQSSYALFQYDPLLLNELGVVAFNKS-DMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMY-DAAIDAL 539 (597)
T ss_dssp HHHHHHHHHCCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCH-HHHHHHH
T ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHhC-CHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCH-HHHHHHH
Confidence 6666666666666666666666666653 666777777776666 4544 45666666666666666 3566677
Q ss_pred HHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHH
Q 009766 165 EDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231 (526)
Q Consensus 165 dkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL 231 (526)
+++++.+|.|..+|...+.++...++ ++++++.+.+++.++|++..+|..+..++
T Consensus 540 ~~~~~~~p~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~~l~~~p~~~~~~~~l~~~~ 594 (597)
T 2xpi_A 540 NQGLLLSTNDANVHTAIALVYLHKKI------------PGLAITHLHESLAISPNEIMASDLLKRAL 594 (597)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCTTCHHHHHHHHHTT
T ss_pred HHHHHhCCCChHHHHHHHHHHHHhCC------------HHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 77777777777777776666666553 67888888888888888888886665554
No 55
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.29 E-value=2e-10 Score=118.09 Aligned_cols=187 Identities=11% Similarity=0.040 Sum_probs=134.2
Q ss_pred HhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 009766 34 NHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKW 113 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrw 113 (526)
....|.+ ++|+..+.+++..+|+ ..+|...+.++...+ .+++++.++++++..+|++..+|..++.
T Consensus 253 ~~~~~~~-~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 318 (537)
T 3fp2_A 253 HFLKNNL-LDAQVLLQESINLHPT-PNSYIFLALTLADKE------------NSQEFFKFFQKAVDLNPEYPPTYYHRGQ 318 (537)
T ss_dssp HHHTTCH-HHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSS------------CCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHhcccH-HHHHHHHHHHHhcCCC-chHHHHHHHHHHHhc------------CHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 3345666 6777777777777777 777777777665554 3577777777777777777777777777
Q ss_pred HHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhc
Q 009766 114 ILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKV 193 (526)
Q Consensus 114 vL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~ 193 (526)
++...+ .++++++.++++++.+|.+..+|...+.+....|.+ ++++++++++++.+|.+..+|.+++.++...++...
T Consensus 319 ~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 396 (537)
T 3fp2_A 319 MYFILQ-DYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKF-TESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDT 396 (537)
T ss_dssp HHHHTT-CHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHH
T ss_pred HHHhcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHH
Confidence 777664 677777777777777777777777777777777776 367777777777777777777777777766654310
Q ss_pred --------------cC-c-c------------chh----------hhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcccc
Q 009766 194 --------------EG-F-V------------SKE----------KVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 194 --------------~g-~-~------------~~~----------eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~ 235 (526)
.. . . ... ..++++++.+.+++..+|++..+|..+..++....
T Consensus 397 A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g 476 (537)
T 3fp2_A 397 AIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRSEQAKIGLAQLKLQME 476 (537)
T ss_dssp HHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 00 0 0 001 55799999999999999999999988888887654
Q ss_pred C
Q 009766 236 R 236 (526)
Q Consensus 236 ~ 236 (526)
+
T Consensus 477 ~ 477 (537)
T 3fp2_A 477 K 477 (537)
T ss_dssp C
T ss_pred c
Confidence 4
No 56
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.28 E-value=2.5e-10 Score=119.63 Aligned_cols=189 Identities=9% Similarity=-0.004 Sum_probs=143.2
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRK 112 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRr 112 (526)
.....|.+ ++|+.++.+++..+|++..+|+..+.++.+.+ .+++++.++++++..+|++..+|+...
T Consensus 348 ~~~~~g~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~~~~~~~~~~~~~~~l~ 414 (597)
T 2xpi_A 348 SLHESGEK-NKLYLISNDLVDRHPEKAVTWLAVGIYYLCVN------------KISEARRYFSKSSTMDPQFGPAWIGFA 414 (597)
T ss_dssp HHHHHTCH-HHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHhCCH-HHHHHHHHHHHhhCcccHHHHHHHHHHHHHhc------------cHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 33467888 89999999999999999999999999988876 367777778877777777777777777
Q ss_pred HHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhh
Q 009766 113 WILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRK 192 (526)
Q Consensus 113 wvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~ 192 (526)
.++.+.+ .+++++++++++++.+|.+..+|...+.+....|.+ ++++++++++++.+|.|..+|...+.++...++..
T Consensus 415 ~~~~~~g-~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 492 (597)
T 2xpi_A 415 HSFAIEG-EHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNI-LLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQ 492 (597)
T ss_dssp HHHHHHT-CHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHcC-CHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHH
Confidence 7777663 677777777777777777777777777777777776 36777777777777777777777777766655421
Q ss_pred c----------c----Cccc---------------hhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccccC
Q 009766 193 V----------E----GFVS---------------KEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 193 ~----------~----g~~~---------------~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
. . +..+ ....++++++.+++++..+|++..+|..+..++....+
T Consensus 493 ~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~ 565 (597)
T 2xpi_A 493 TAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKI 565 (597)
T ss_dssp HHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 0 0 0000 12236999999999999999999999988888866543
No 57
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.27 E-value=1.4e-10 Score=118.20 Aligned_cols=190 Identities=8% Similarity=-0.119 Sum_probs=154.7
Q ss_pred hcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 009766 36 HNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWIL 115 (526)
Q Consensus 36 ~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL 115 (526)
..+.| ++|+.++.++|.++|++..+|...+.+...++.. ...+++++.+++++.++|++..++...+..+
T Consensus 150 ~~~~y-~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~---------~~~~~al~~~~~al~l~p~~~~~~~~l~~~~ 219 (472)
T 4g1t_A 150 GGNQN-ERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW---------PPSQNAIDPLRQAIRLNPDNQYLKVLLALKL 219 (472)
T ss_dssp CTTHH-HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS---------CCCCCTHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred ccccH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc---------hHHHHHHHHHHHHhhcCCcchHHHHHHHHHH
Confidence 34567 8999999999999999999999999887766531 1246778999999999999999999998888
Q ss_pred HhCC---CChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhh
Q 009766 116 SKGH---SSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRK 192 (526)
Q Consensus 116 ~kl~---~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~ 192 (526)
..+. +.++++++++++++..+|.+..+|.+.+.+....+.+. ++++++.++++.+|.+..+|+..+.+........
T Consensus 220 ~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~-~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~ 298 (472)
T 4g1t_A 220 HKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPD-KAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQV 298 (472)
T ss_dssp HHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchH-HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHh
Confidence 7653 35779999999999999999999999999999999984 8999999999999999999999988765543221
Q ss_pred c-c-----C-ccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccccC
Q 009766 193 V-E-----G-FVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 193 ~-~-----g-~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
. . + .......++++++.+.+++..+|.+..+|+.++.++.....
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~ 349 (472)
T 4g1t_A 299 MNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQ 349 (472)
T ss_dssp HHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhcc
Confidence 0 0 0 01123456889999999999999999999888887766543
No 58
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.27 E-value=1.3e-10 Score=114.28 Aligned_cols=179 Identities=8% Similarity=-0.049 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcC--CCCCCchhhhhHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHhC
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTE--NDSDPDSLKSILDEELRVVESALR-QNFKSYGAWHHRKWILSKG 118 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~--~~sdPe~~~~~~~eEL~~~e~aL~-~NPKsy~AW~HRrwvL~kl 118 (526)
++|+..++++|..+|++..+|...+.++...+.. ...+.+.....+++++..+++++. .+|++..+|...+-++...
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~ 112 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 112 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 6899999999999999999999999988643100 000111112335899999999999 7999999999999998887
Q ss_pred CCChHHHHHHHHHHHHhCCCChh-hhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHH-hhhhhccCc
Q 009766 119 HSSIDNELRLLDKFQKADSRNFH-AWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSN-LLKRKVEGF 196 (526)
Q Consensus 119 ~~~~eeELe~~dkaLeiDprNyh-AW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~-L~~~~~~g~ 196 (526)
+ .++++.+.++++++++|.+.. +|...+.++...|.+ +++++.++++++.+|.+..+|.....+-.. .+
T Consensus 113 ~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~-~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~------- 183 (308)
T 2ond_A 113 M-KYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGI-KSGRMIFKKAREDARTRHHVYVTAALMEYYCSK------- 183 (308)
T ss_dssp T-CHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCH-HHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSC-------
T ss_pred C-CHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC-------
Confidence 4 899999999999999999997 999999998888887 478999999999999988887644433211 12
Q ss_pred cchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccc
Q 009766 197 VSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQT 234 (526)
Q Consensus 197 ~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~ 234 (526)
.+++++..+.+++..+|++..+|..+..++...
T Consensus 184 -----~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~ 216 (308)
T 2ond_A 184 -----DKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHL 216 (308)
T ss_dssp -----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred -----CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence 268888899999999999988887666665443
No 59
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.27 E-value=1.1e-09 Score=102.21 Aligned_cols=187 Identities=12% Similarity=0.039 Sum_probs=141.7
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHH
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHH 110 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~H 110 (526)
-......|++ ++|+..+.+++.++|++..+|...+.++...+ .+++++.++++++..+|++..+|..
T Consensus 50 ~~~~~~~~~~-~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~------------~~~~A~~~~~~al~~~~~~~~~~~~ 116 (275)
T 1xnf_A 50 GVLYDSLGLR-ALARNDFSQALAIRPDMPEVFNYLGIYLTQAG------------NFDAAYEAFDSVLELDPTYNYAHLN 116 (275)
T ss_dssp HHHHHHTTCH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred HHHHHHcccH-HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHcc------------CHHHHHHHHHHHHhcCccccHHHHH
Confidence 3345567888 89999999999999999999999999998886 4899999999999999999999999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhh
Q 009766 111 RKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLK 190 (526)
Q Consensus 111 RrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~ 190 (526)
++.++...+ .+++++.+++++++.+|.+..+......+ ...+.+ ++++.++.+++..+|.+...|......+.....
T Consensus 117 la~~~~~~g-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (275)
T 1xnf_A 117 RGIALYYGG-RDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDE-KQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISE 193 (275)
T ss_dssp HHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCH-HHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCH
T ss_pred HHHHHHHhc-cHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCH-HHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCH
Confidence 999999885 89999999999999999998665555444 334555 478888888888888887766544333222111
Q ss_pred hhc-------cCc------------------cchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 191 RKV-------EGF------------------VSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 191 ~~~-------~g~------------------~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
... ... -.....++++++.+.+++..+|++...+.+...-+++
T Consensus 194 ~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~l~~ 261 (275)
T 1xnf_A 194 QTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSL 261 (275)
T ss_dssp HHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Confidence 000 000 0012236999999999999999987766544444444
No 60
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.26 E-value=1.9e-10 Score=107.46 Aligned_cols=167 Identities=12% Similarity=-0.017 Sum_probs=143.7
Q ss_pred cCCCcHHHHHHHHHHHHh----CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHH
Q 009766 37 NHIYSKEAVELSTKLLET----NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRK 112 (526)
Q Consensus 37 ~geyseEAL~lt~kaL~i----NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRr 112 (526)
.|+| ++|+..+.+++.. +|.+..+|..++.+....+ .+++++.++++++..+|++..+|...+
T Consensus 18 ~~~~-~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------------~~~~A~~~~~~al~~~~~~~~~~~~la 84 (275)
T 1xnf_A 18 TLQQ-EVILARMEQILASRALTDDERAQLLYERGVLYDSLG------------LRALARNDFSQALAIRPDMPEVFNYLG 84 (275)
T ss_dssp CHHH-HHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_pred cchH-HHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcc------------cHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 4566 8999999999998 4678899999999998886 489999999999999999999999999
Q ss_pred HHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhh
Q 009766 113 WILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRK 192 (526)
Q Consensus 113 wvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~ 192 (526)
.++...+ .+++++.+++++++.+|.+..+|...+.++..+|.+. +++++++++++.+|.+..+....... ...+
T Consensus 85 ~~~~~~~-~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~--- 158 (275)
T 1xnf_A 85 IYLTQAG-NFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDK-LAQDDLLAFYQDDPNDPFRSLWLYLA-EQKL--- 158 (275)
T ss_dssp HHHHHTT-CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCTTCHHHHHHHHHH-HHHH---
T ss_pred HHHHHcc-CHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHH-HHHHHHHHHHHhCCCChHHHHHHHHH-HHhc---
Confidence 9999885 9999999999999999999999999999999999984 89999999999999998665544433 2222
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHH
Q 009766 193 VEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231 (526)
Q Consensus 193 ~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL 231 (526)
.+++++..+.+++..+|.+...|......+
T Consensus 159 ---------~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (275)
T 1xnf_A 159 ---------DEKQAKEVLKQHFEKSDKEQWGWNIVEFYL 188 (275)
T ss_dssp ---------CHHHHHHHHHHHHHHSCCCSTHHHHHHHHT
T ss_pred ---------CHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 268999999999999999988775444443
No 61
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.25 E-value=2.2e-10 Score=116.60 Aligned_cols=182 Identities=9% Similarity=-0.036 Sum_probs=130.7
Q ss_pred hcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCC----------CCCch------------hhhhHHHHHHH
Q 009766 36 HNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTEND----------SDPDS------------LKSILDEELRV 93 (526)
Q Consensus 36 ~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~----------sdPe~------------~~~~~~eEL~~ 93 (526)
..|.+ ++|+..+.+++..+|++..+|..++.++...+..+. ..|+. ..+.+++++..
T Consensus 282 ~~~~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 360 (514)
T 2gw1_A 282 DRNDS-TEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETL 360 (514)
T ss_dssp TSSCC-TTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHH
T ss_pred HCCCH-HHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHH
Confidence 44555 455555555555555555555555555555442111 01110 01357888888
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChh------hhhHHHHHHHH---hCcChHHHHHHH
Q 009766 94 VESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFH------AWNYRRFVAAS---MNRSEEDELKYT 164 (526)
Q Consensus 94 ~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyh------AW~yRr~lL~~---Lg~~~eeELe~t 164 (526)
+++++..+|.+..+|..++.++...+ .+++++.+++++++.+|.+.. +|..++.+... .|.+ +++++++
T Consensus 361 ~~~~~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~A~~~~ 438 (514)
T 2gw1_A 361 FSEAKRKFPEAPEVPNFFAEILTDKN-DFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENF-IEATNLL 438 (514)
T ss_dssp HHHHHHHSTTCSHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHH-HHHHHHH
T ss_pred HHHHHHHcccCHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCH-HHHHHHH
Confidence 88888888888888888888887774 788888888888888887755 88888888877 7777 4788888
Q ss_pred HHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHc
Q 009766 165 EDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLD 232 (526)
Q Consensus 165 dkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~ 232 (526)
++++..+|.+..+|..++.++...+. ++++++.+.+++.++|++..+|....++-.
T Consensus 439 ~~a~~~~~~~~~~~~~la~~~~~~g~------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 494 (514)
T 2gw1_A 439 EKASKLDPRSEQAKIGLAQMKLQQED------------IDEAITLFEESADLARTMEEKLQAITFAEA 494 (514)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhcC------------HHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 88888888888888888888777654 699999999999999999999977665543
No 62
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.23 E-value=2.4e-10 Score=116.27 Aligned_cols=194 Identities=12% Similarity=0.064 Sum_probs=151.5
Q ss_pred HHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCC----------CCch------------hh
Q 009766 27 LQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDS----------DPDS------------LK 84 (526)
Q Consensus 27 l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~s----------dPe~------------~~ 84 (526)
+...-......|++ ++|+..+.+++..+|+ ..+|...+.++...+....+ +|+. ..
T Consensus 240 ~~~~~~~~~~~~~~-~~A~~~~~~~l~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 317 (514)
T 2gw1_A 240 LEHTGIFKFLKNDP-LGAHEDIKKAIELFPR-VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFIL 317 (514)
T ss_dssp HHHHHHHHHHSSCH-HHHHHHHHHHHHHCCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCH-HHHHHHHHHHHhhCcc-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHh
Confidence 33344455567888 8999999999999999 99999999999888753321 2211 12
Q ss_pred hhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHH
Q 009766 85 SILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYT 164 (526)
Q Consensus 85 ~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~t 164 (526)
..+++++..+++++..+|++..+|...+.++...+ .+++++.+++++++.+|.+..+|...+.+....|.+ +++++++
T Consensus 318 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~~A~~~~ 395 (514)
T 2gw1_A 318 QNYDQAGKDFDKAKELDPENIFPYIQLACLAYREN-KFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDF-DKALKQY 395 (514)
T ss_dssp TCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTT-CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCH-HHHHHHH
Confidence 45677888888888888888888887777777664 788888888888888888888888888888888877 4688888
Q ss_pred HHHHHhccCChh------HHHHHHHHHHH---hhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcccc
Q 009766 165 EDMICNNFSNYS------AWHNRSLLLSN---LLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 165 dkaI~~nPsNyS------AW~yR~~LL~~---L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~ 235 (526)
.+++..+|.+.. +|..++.++.. .+. ++++++.+.+++..+|++..+|..+..++....
T Consensus 396 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------------~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g 463 (514)
T 2gw1_A 396 DLAIELENKLDGIYVGIAPLVGKATLLTRNPTVEN------------FIEATNLLEKASKLDPRSEQAKIGLAQMKLQQE 463 (514)
T ss_dssp HHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTH------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCC------------HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc
Confidence 888888887755 78888877776 554 799999999999999999999988888776644
Q ss_pred C
Q 009766 236 R 236 (526)
Q Consensus 236 ~ 236 (526)
.
T Consensus 464 ~ 464 (514)
T 2gw1_A 464 D 464 (514)
T ss_dssp C
T ss_pred C
Confidence 3
No 63
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.22 E-value=5.1e-11 Score=108.22 Aligned_cols=126 Identities=6% Similarity=-0.076 Sum_probs=113.1
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHH
Q 009766 29 SQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAW 108 (526)
Q Consensus 29 ~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW 108 (526)
..+.+....|.. +.++|.++|++..+|..++.++...+ .+++++.++++++..+|++..+|
T Consensus 13 ~~l~~~~~~~~~-------l~~al~l~p~~~~~~~~lg~~~~~~g------------~~~eA~~~~~~al~~~P~~~~~~ 73 (151)
T 3gyz_A 13 TAVIDAINSGAT-------LKDINAIPDDMMDDIYSYAYDFYNKG------------RIEEAEVFFRFLCIYDFYNVDYI 73 (151)
T ss_dssp HHHHHHHHTSCC-------TGGGCCSCHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHCCCC-------HHHHhCCCHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCCHHHH
Confidence 334444445555 67788899999999999999998887 48999999999999999999999
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCCh
Q 009766 109 HHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175 (526)
Q Consensus 109 ~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNy 175 (526)
+.++.++...+ .+++++++|+++++++|.|..+|.+.+.++..+|.+. +++++++++++.+|...
T Consensus 74 ~~lg~~~~~~g-~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~-eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 74 MGLAAIYQIKE-QFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPL-KAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHHTT-CHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHc-cHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHH-HHHHHHHHHHHhCCCHH
Confidence 99999999985 9999999999999999999999999999999999994 89999999999998764
No 64
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.22 E-value=3.2e-10 Score=116.62 Aligned_cols=146 Identities=10% Similarity=0.022 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCC
Q 009766 59 YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSR 138 (526)
Q Consensus 59 ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDpr 138 (526)
..+|..++.+....+ .+++++.++++++..+|+ ..+|...+.++...+ .+++++++++++++.+|.
T Consensus 243 ~~~~~~~g~~~~~~~------------~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~-~~~~A~~~~~~~~~~~~~ 308 (537)
T 3fp2_A 243 ALALCYTGIFHFLKN------------NLLDAQVLLQESINLHPT-PNSYIFLALTLADKE-NSQEFFKFFQKAVDLNPE 308 (537)
T ss_dssp HHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSS-CCHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhcc------------cHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhc-CHHHHHHHHHHHhccCCC
Confidence 346777888877775 489999999999999999 999999988887774 899999999999999999
Q ss_pred ChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCC
Q 009766 139 NFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDP 218 (526)
Q Consensus 139 NyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP 218 (526)
+..+|...+.+....+.+ +++++++++++..+|.+..+|..++.++...+. ++++++.+.+++..+|
T Consensus 309 ~~~~~~~l~~~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~------------~~~A~~~~~~~~~~~~ 375 (537)
T 3fp2_A 309 YPPTYYHRGQMYFILQDY-KNAKEDFQKAQSLNPENVYPYIQLACLLYKQGK------------FTESEAFFNETKLKFP 375 (537)
T ss_dssp CHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHhcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHHhCC
Confidence 999999999999999998 489999999999999999999999999988765 6899999999999999
Q ss_pred CCcccHHHHHHHH
Q 009766 219 DDQSGWFYHLWLL 231 (526)
Q Consensus 219 ~DeSaW~Y~r~LL 231 (526)
++..+|.++..++
T Consensus 376 ~~~~~~~~l~~~~ 388 (537)
T 3fp2_A 376 TLPEVPTFFAEIL 388 (537)
T ss_dssp TCTHHHHHHHHHH
T ss_pred CChHHHHHHHHHH
Confidence 9998888776654
No 65
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.21 E-value=5.4e-10 Score=113.78 Aligned_cols=177 Identities=10% Similarity=-0.092 Sum_probs=149.1
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC
Q 009766 33 HNHHNHIYSKEAVELSTKLLETN--------PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS 104 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iN--------Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs 104 (526)
...+.|+| ++|+..+.+++.++ ++...+++.+++++..++. ..+++++.++++++..+|++
T Consensus 103 ~y~~~g~~-~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~----------~~y~~A~~~~~kal~~~p~~ 171 (472)
T 4g1t_A 103 VYYHMGRL-SDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGG----------NQNERAKVCFEKALEKKPKN 171 (472)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCT----------THHHHHHHHHHHHHHHSTTC
T ss_pred HHHHcCCh-HHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHcc----------ccHHHHHHHHHHHHHhCCCC
Confidence 34467999 89999999999974 4567889999998888763 46899999999999999999
Q ss_pred hHHHHHHHHHHHhCC--CChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcC---hHHHHHHHHHHHHhccCChhHHH
Q 009766 105 YGAWHHRKWILSKGH--SSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRS---EEDELKYTEDMICNNFSNYSAWH 179 (526)
Q Consensus 105 y~AW~HRrwvL~kl~--~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~---~eeELe~tdkaI~~nPsNySAW~ 179 (526)
..+|.....+...+. ...+++++.+.++++++|.+..++...+..+..++.. .+++++++++++..+|.+..+|.
T Consensus 172 ~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~ 251 (472)
T 4g1t_A 172 PEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLR 251 (472)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHH
Confidence 999998887754321 3567899999999999999999999999888776532 13688999999999999999999
Q ss_pred HHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHc
Q 009766 180 NRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLD 232 (526)
Q Consensus 180 yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~ 232 (526)
+++.++...+. ++++++.+.+++..+|++..+|+.++.+..
T Consensus 252 ~lg~~~~~~~~------------~~~A~~~~~~al~~~p~~~~~~~~lg~~y~ 292 (472)
T 4g1t_A 252 SAAKFYRRKDE------------PDKAIELLKKALEYIPNNAYLHCQIGCCYR 292 (472)
T ss_dssp HHHHHHHHTTC------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCc------------hHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 99999988765 799999999999999999999977665543
No 66
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.21 E-value=3.2e-11 Score=109.55 Aligned_cols=118 Identities=7% Similarity=-0.093 Sum_probs=110.4
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHH
Q 009766 90 ELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMIC 169 (526)
Q Consensus 90 EL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~ 169 (526)
+-..+.+++.++|++..+|+.++.++.+.+ .+++++.+++++++++|.|..+|...+.++..+|.+. +++++++++++
T Consensus 21 ~~~~l~~al~l~p~~~~~~~~lg~~~~~~g-~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~-~Ai~~~~~al~ 98 (151)
T 3gyz_A 21 SGATLKDINAIPDDMMDDIYSYAYDFYNKG-RIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQ-QAADLYAVAFA 98 (151)
T ss_dssp TSCCTGGGCCSCHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHH
T ss_pred CCCCHHHHhCCCHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHH-HHHHHHHHHHh
Confidence 335678889999999999999999999885 9999999999999999999999999999999999995 89999999999
Q ss_pred hccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCc
Q 009766 170 NNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQ 221 (526)
Q Consensus 170 ~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~De 221 (526)
.+|.|..+|++++.++..+++ +++++.++++++.++|+.+
T Consensus 99 l~P~~~~~~~~lg~~~~~lg~------------~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQLRLKA------------PLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HSSSCCHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCCCHH
T ss_pred hCCCCcHHHHHHHHHHHHcCC------------HHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999886 7999999999999999875
No 67
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.21 E-value=1.4e-09 Score=107.57 Aligned_cols=166 Identities=12% Similarity=-0.003 Sum_probs=112.2
Q ss_pred cCCCcHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 009766 37 NHIYSKEAVELSTKLLET--NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWI 114 (526)
Q Consensus 37 ~geyseEAL~lt~kaL~i--NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwv 114 (526)
.|++ ++|++.+++++.. +|++.++|...+.++...++ +++++..+++ |.+..+|..+..+
T Consensus 78 ~~~~-~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~------------~~~Al~~l~~-----~~~~~~~~~l~~~ 139 (291)
T 3mkr_A 78 HSRR-DAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQN------------PDAALRTLHQ-----GDSLECMAMTVQI 139 (291)
T ss_dssp STTH-HHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTC------------HHHHHHHHTT-----CCSHHHHHHHHHH
T ss_pred CCcH-HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCC------------HHHHHHHHhC-----CCCHHHHHHHHHH
Confidence 4556 8999999999986 69999999999999988873 5666666665 6667777777666
Q ss_pred HHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHH--hCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhh
Q 009766 115 LSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAAS--MNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRK 192 (526)
Q Consensus 115 L~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~--Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~ 192 (526)
+.+++ .++++++.++++++.+|.+.......+|+--. .+++ ++++..++++++.+|.+..+|+.++.++..+++
T Consensus 140 ~~~~g-~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~-~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~-- 215 (291)
T 3mkr_A 140 LLKLD-RLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKL-QDAYYIFQEMADKCSPTLLLLNGQAACHMAQGR-- 215 (291)
T ss_dssp HHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHH-HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTC--
T ss_pred HHHCC-CHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC--
Confidence 66663 66777777777777776654332223333221 2344 356667777777777777777777776666654
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccc
Q 009766 193 VEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQT 234 (526)
Q Consensus 193 ~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~ 234 (526)
++++++.+.+++..+|+|..+|+.+..++...
T Consensus 216 ----------~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~ 247 (291)
T 3mkr_A 216 ----------WEAAEGVLQEALDKDSGHPETLINLVVLSQHL 247 (291)
T ss_dssp ----------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred ----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 56677777777777777777776666555543
No 68
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.20 E-value=6.3e-10 Score=109.40 Aligned_cols=172 Identities=9% Similarity=-0.006 Sum_probs=144.2
Q ss_pred hcCCC------cHHHHHHHHHHHH-hCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChH-H
Q 009766 36 HNHIY------SKEAVELSTKLLE-TNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG-A 107 (526)
Q Consensus 36 ~~gey------seEAL~lt~kaL~-iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~-A 107 (526)
..|.+ .++|+..++++|. ++|++..+|...+.++...+ .++++...++++|..+|+++. +
T Consensus 69 ~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~------------~~~~A~~~~~~al~~~p~~~~~~ 136 (308)
T 2ond_A 69 EKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRM------------KYEKVHSIYNRLLAIEDIDPTLV 136 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHTSSSSCTHHH
T ss_pred hccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC------------CHHHHHHHHHHHHhccccCccHH
Confidence 35776 3799999999999 79999999999999988876 489999999999999999997 9
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHH-hCcChHHHHHHHHHHHHhccCChhHHHHHHHHHH
Q 009766 108 WHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAAS-MNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLS 186 (526)
Q Consensus 108 W~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~-Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~ 186 (526)
|...+.++.+.+ .+++++..++++++.+|.+.++|.....+-.. .|.+ +++++.++++++.+|.+..+|...+.++.
T Consensus 137 ~~~~~~~~~~~~-~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 137 YIQYMKFARRAE-GIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDK-SVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHH-CHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 999998887764 89999999999999999999998766555332 5666 58999999999999999999999888877
Q ss_pred HhhhhhccCccchhhhHHHHHHHHHHHHHh---CCC-CcccHHHHHHHHcc
Q 009766 187 NLLKRKVEGFVSKEKVLPDEYEFVHQAIFT---DPD-DQSGWFYHLWLLDQ 233 (526)
Q Consensus 187 ~L~~~~~~g~~~~~eileeELe~v~~AI~~---dP~-DeSaW~Y~r~LL~~ 233 (526)
.++. ++++...+.+++.. +|+ ....|.....++..
T Consensus 215 ~~g~------------~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~ 253 (308)
T 2ond_A 215 HLNE------------DNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESN 253 (308)
T ss_dssp TTCC------------HHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHH
T ss_pred HCCC------------HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 6654 68899999999985 554 67788755554443
No 69
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.18 E-value=1.6e-10 Score=127.86 Aligned_cols=140 Identities=9% Similarity=-0.104 Sum_probs=130.1
Q ss_pred HHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHH
Q 009766 32 LHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHR 111 (526)
Q Consensus 32 ~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HR 111 (526)
......|+| ++|+..+.++|..+|++..+|+.++.++..++ .+++++..++++++.+|++..+|..+
T Consensus 441 ~~~~~~g~~-~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g------------~~~~A~~~~~~al~l~P~~~~~~~~l 507 (681)
T 2pzi_A 441 RALLDLGDV-AKATRKLDDLAERVGWRWRLVWYRAVAELLTG------------DYDSATKHFTEVLDTFPGELAPKLAL 507 (681)
T ss_dssp HHHHHHTCH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHSTTCSHHHHHH
T ss_pred HHHHhcCCH-HHHHHHHHHHhccCcchHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 345567899 89999999999999999999999999999887 48999999999999999999999999
Q ss_pred HHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHH
Q 009766 112 KWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSN 187 (526)
Q Consensus 112 rwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~ 187 (526)
+.++...+ .+++ ++.|+++++++|.+..+|.+++.++..+|.+. ++++.++++++.+|.+..+|.+++.++..
T Consensus 508 g~~~~~~g-~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~-~A~~~~~~al~l~P~~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 508 AATAELAG-NTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRV-GAVRTLDEVPPTSRHFTTARLTSAVTLLS 580 (681)
T ss_dssp HHHHHHHT-CCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHTSCTTSTTHHHHHHHHHHHTC-
T ss_pred HHHHHHcC-ChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHH-HHHHHHHhhcccCcccHHHHHHHHHHHHc
Confidence 99999885 8889 99999999999999999999999999999984 89999999999999999999999998644
No 70
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.14 E-value=3.3e-09 Score=99.57 Aligned_cols=166 Identities=7% Similarity=-0.102 Sum_probs=139.9
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCcH---HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChH-
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPELY---TAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG- 106 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~y---tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~- 106 (526)
-......|+| ++|+..+++++..+|++. .+|..++.+....+ .+++++..+++++..+|++..
T Consensus 11 a~~~~~~g~~-~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~------------~~~~A~~~~~~~l~~~P~~~~~ 77 (225)
T 2yhc_A 11 AQQKLQDGNW-RQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNA------------DLPLAQAAIDRFIRLNPTHPNI 77 (225)
T ss_dssp HHHHHHHTCH-HHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCTTH
T ss_pred HHHHHHcCCH-HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcC------------CHHHHHHHHHHHHHHCcCCCcH
Confidence 3445677999 899999999999999874 78999999998886 489999999999999999976
Q ss_pred --HHHHHHHHHHhC-----------------CCChHHHHHHHHHHHHhCCCChhhhh-----------------HHHHHH
Q 009766 107 --AWHHRKWILSKG-----------------HSSIDNELRLLDKFQKADSRNFHAWN-----------------YRRFVA 150 (526)
Q Consensus 107 --AW~HRrwvL~kl-----------------~~~~eeELe~~dkaLeiDprNyhAW~-----------------yRr~lL 150 (526)
+|+.++.++... .+.+++++..++++++.+|.+..+|. ..+.++
T Consensus 78 ~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~ 157 (225)
T 2yhc_A 78 DYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYY 157 (225)
T ss_dssp HHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 898888887642 13578999999999999999998884 344455
Q ss_pred HHhCcChHHHHHHHHHHHHhccCCh---hHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcc
Q 009766 151 ASMNRSEEDELKYTEDMICNNFSNY---SAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQS 222 (526)
Q Consensus 151 ~~Lg~~~eeELe~tdkaI~~nPsNy---SAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeS 222 (526)
...+.+ .+++..++++|+.+|.+. .+|..++.++..++. ++++++.++.++...|++..
T Consensus 158 ~~~~~~-~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~------------~~~A~~~~~~l~~~~~~~~~ 219 (225)
T 2yhc_A 158 TERGAW-VAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQM------------NAQAEKVAKIIAANSSNTLE 219 (225)
T ss_dssp HHHTCH-HHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHCCSCCCC
T ss_pred HHcCcH-HHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCC------------cHHHHHHHHHHHhhCCCchh
Confidence 566777 489999999999999986 679999999998875 68999999999999988753
No 71
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.14 E-value=7.2e-10 Score=98.74 Aligned_cols=124 Identities=4% Similarity=-0.244 Sum_probs=112.8
Q ss_pred HHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHH
Q 009766 47 LSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNEL 126 (526)
Q Consensus 47 lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeEL 126 (526)
.+.++|.++|++..+|+.++.++...+ .+++++..+++++..+|.+..+|+.++.++...+ .+++++
T Consensus 9 ~~~~al~~~p~~~~~~~~~g~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~~A~ 75 (148)
T 2vgx_A 9 TIAMLNEISSDTLEQLYSLAFNQYQSG------------XYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMG-QYDLAI 75 (148)
T ss_dssp SHHHHTTCCHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHH
T ss_pred hHHHHHcCCHhhHHHHHHHHHHHHHcC------------ChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHh-hHHHHH
Confidence 378899999999999999999998886 4899999999999999999999999999999885 999999
Q ss_pred HHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHH
Q 009766 127 RLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLL 184 (526)
Q Consensus 127 e~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~L 184 (526)
+++++++.++|.|..+|.+++.++..+|.+. ++++++.++++.+|.|......+..+
T Consensus 76 ~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~-~A~~~~~~al~~~p~~~~~~~~~~~~ 132 (148)
T 2vgx_A 76 HSYSYGAVMDIXEPRFPFHAAECLLQXGELA-EAESGLFLAQELIANXPEFXELSTRV 132 (148)
T ss_dssp HHHHHHHHHSTTCTHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred HHHHHHHhcCCCCchHHHHHHHHHHHcCCHH-HHHHHHHHHHHHCcCCCcchHHHHHH
Confidence 9999999999999999999999999999984 89999999999999887665444443
No 72
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.13 E-value=5.4e-10 Score=99.55 Aligned_cols=124 Identities=4% Similarity=-0.145 Sum_probs=113.5
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhc
Q 009766 92 RVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNN 171 (526)
Q Consensus 92 ~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~n 171 (526)
..+++++..+|++..+|+.++.++...+ .+++++..+.+++..+|.|..+|..++.++..+|.+. ++++++++++..+
T Consensus 8 ~~~~~al~~~p~~~~~~~~~g~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~-~A~~~~~~al~l~ 85 (148)
T 2vgx_A 8 GTIAMLNEISSDTLEQLYSLAFNQYQSG-XYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYD-LAIHSYSYGAVMD 85 (148)
T ss_dssp CSHHHHTTCCHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHS
T ss_pred hhHHHHHcCCHhhHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHH-HHHHHHHHHHhcC
Confidence 4578899999999999999999998884 8999999999999999999999999999999999994 8999999999999
Q ss_pred cCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHH
Q 009766 172 FSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLW 229 (526)
Q Consensus 172 PsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~ 229 (526)
|.|..+|++++.++..+++ ++++++++.+++..+|++......+..
T Consensus 86 p~~~~~~~~lg~~~~~~g~------------~~~A~~~~~~al~~~p~~~~~~~~~~~ 131 (148)
T 2vgx_A 86 IXEPRFPFHAAECLLQXGE------------LAEAESGLFLAQELIANXPEFXELSTR 131 (148)
T ss_dssp TTCTHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCchHHHHHHHHHHHcCC------------HHHHHHHHHHHHHHCcCCCcchHHHHH
Confidence 9999999999999998875 699999999999999998877654443
No 73
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.11 E-value=3e-10 Score=102.46 Aligned_cols=158 Identities=9% Similarity=-0.036 Sum_probs=130.6
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHH
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHH 110 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~H 110 (526)
-......|++ ++|+..+.++|..+|++..+|...+.++...+ .+++++..+++++..+| +...+..
T Consensus 13 a~~~~~~g~~-~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g------------~~~~A~~~~~~a~~~~p-~~~~~~~ 78 (176)
T 2r5s_A 13 VSELLQQGEH-AQALNVIQTLSDELQSRGDVKLAKADCLLETK------------QFELAQELLATIPLEYQ-DNSYKSL 78 (176)
T ss_dssp HHHHHHTTCH-HHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTT------------CHHHHHHHHTTCCGGGC-CHHHHHH
T ss_pred HHHHHHcCCH-HHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCC------------CHHHHHHHHHHhhhccC-ChHHHHH
Confidence 3445578899 89999999999999999999999999999887 48999999999999999 7766655
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCC--hhHHHHHHHHHHHh
Q 009766 111 RKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSN--YSAWHNRSLLLSNL 188 (526)
Q Consensus 111 RrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsN--ySAW~yR~~LL~~L 188 (526)
...+.........++++.++++++.+|.|..+|...+.++...|.+. ++++.+.++++.+|.. ..+|...+.++..+
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~-~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~ 157 (176)
T 2r5s_A 79 IAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDE-EALELLWNILKVNLGAQDGEVKKTFMDILSAL 157 (176)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHH-HHHHHHHHHHHhCcccChHHHHHHHHHHHHHh
Confidence 55442211012235799999999999999999999999999999984 8999999999999976 56999999999888
Q ss_pred hhhhccCccchhhhHHHHHHHHHHHHH
Q 009766 189 LKRKVEGFVSKEKVLPDEYEFVHQAIF 215 (526)
Q Consensus 189 ~~~~~~g~~~~~eileeELe~v~~AI~ 215 (526)
++ .++++..+.++|.
T Consensus 158 g~------------~~~A~~~y~~al~ 172 (176)
T 2r5s_A 158 GQ------------GNAIASKYRRQLY 172 (176)
T ss_dssp CS------------SCHHHHHHHHHHH
T ss_pred CC------------CCcHHHHHHHHHH
Confidence 75 3667777777663
No 74
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.11 E-value=4e-09 Score=104.28 Aligned_cols=163 Identities=10% Similarity=0.024 Sum_probs=138.8
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRK 112 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRr 112 (526)
.....|++ ++|+..+.+ |++..+|..++.++..++ .++++++.+++++..+|.+........
T Consensus 110 ~~~~~g~~-~~Al~~l~~-----~~~~~~~~~l~~~~~~~g------------~~~~A~~~l~~~~~~~p~~~~~~l~~a 171 (291)
T 3mkr_A 110 IYFYDQNP-DAALRTLHQ-----GDSLECMAMTVQILLKLD------------RLDLARKELKKMQDQDEDATLTQLATA 171 (291)
T ss_dssp HHHHTTCH-HHHHHHHTT-----CCSHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHCCCH-HHHHHHHhC-----CCCHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHhhCcCcHHHHHHHH
Confidence 34467888 899999988 999999999999999887 489999999999999999875544444
Q ss_pred HHHHh-CCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhh
Q 009766 113 WILSK-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKR 191 (526)
Q Consensus 113 wvL~k-l~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~ 191 (526)
|+-.. ..+.+++++..++++++.+|.+..+|+.++.++..+|.++ ++++.+.+++..+|.|..+|.+++.++..+++
T Consensus 172 ~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~-eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~- 249 (291)
T 3mkr_A 172 WVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWE-AAEGVLQEALDKDSGHPETLINLVVLSQHLGK- 249 (291)
T ss_dssp HHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-
T ss_pred HHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-
Confidence 44321 2247999999999999999999999999999999999994 89999999999999999999999999888775
Q ss_pred hccCccchhhhHHH-HHHHHHHHHHhCCCCcccHHH
Q 009766 192 KVEGFVSKEKVLPD-EYEFVHQAIFTDPDDQSGWFY 226 (526)
Q Consensus 192 ~~~g~~~~~eilee-ELe~v~~AI~~dP~DeSaW~Y 226 (526)
..+ ..+++.+++.++|+|..+-.+
T Consensus 250 -----------~~eaa~~~~~~~~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 250 -----------PPEVTNRYLSQLKDAHRSHPFIKEY 274 (291)
T ss_dssp -----------CHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred -----------CHHHHHHHHHHHHHhCCCChHHHHH
Confidence 244 568889999999999866543
No 75
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.10 E-value=6.6e-10 Score=96.93 Aligned_cols=127 Identities=3% Similarity=-0.224 Sum_probs=112.2
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHH
Q 009766 46 ELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNE 125 (526)
Q Consensus 46 ~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeE 125 (526)
..+.+++.++|++..+|..++.++...+ .+++++..++.++..+|++..+|...+.++...+ .++++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~~A 71 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAG------------KWDDAQKIFQALCMLDHYDARYFLGLGACRQSLG-LYEQA 71 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHH
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHc------------cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHh-hHHHH
Confidence 3567888999999999999999988876 4899999999999999999999999999999885 99999
Q ss_pred HHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHH
Q 009766 126 LRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLS 186 (526)
Q Consensus 126 Le~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~ 186 (526)
+.++++++.++|.|..+|.+.+.++..+|.+. +++++++++++.+|.|...+..+..+..
T Consensus 72 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~-~A~~~~~~al~~~p~~~~~~~~~~~~~~ 131 (142)
T 2xcb_A 72 LQSYSYGALMDINEPRFPFHAAECHLQLGDLD-GAESGFYSARALAAAQPAHEALAARAGA 131 (142)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHTCGGGHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHH-HHHHHHHHHHHhCCCCcchHHHHHHHHH
Confidence 99999999999999999999999999999984 8999999999999998776655554433
No 76
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.08 E-value=2.3e-09 Score=90.57 Aligned_cols=118 Identities=8% Similarity=-0.034 Sum_probs=107.0
Q ss_pred CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q 009766 56 PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA 135 (526)
Q Consensus 56 Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei 135 (526)
|....+|..++..+...+ .+++++..+++++..+|++..+|..++.++...+ .+++++..+++++++
T Consensus 1 p~~a~~~~~~g~~~~~~~------------~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKS------------DWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLM-SFPEAIADCNKAIEK 67 (126)
T ss_dssp CHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhc------------CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhc-CHHHHHHHHHHHHHh
Confidence 456778999999888876 5899999999999999999999999999999985 999999999999999
Q ss_pred CCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhc------cCChhHHHHHHHHHHH
Q 009766 136 DSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNN------FSNYSAWHNRSLLLSN 187 (526)
Q Consensus 136 DprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~n------PsNySAW~yR~~LL~~ 187 (526)
+|.+..+|..++.+...+|.+. ++++++.++++.+ |.|..++.....+...
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~-~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYA-SALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCHH-HHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 9999999999999999999984 8999999999999 9998888777666544
No 77
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.08 E-value=6.4e-10 Score=112.18 Aligned_cols=135 Identities=13% Similarity=-0.059 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC---------------hH
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS---------------YG 106 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs---------------y~ 106 (526)
++|+..+.+++..+|++..+|+.++.++...+ .+++++.++++++..+|.+ ..
T Consensus 130 ~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g------------~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~ 197 (336)
T 1p5q_A 130 EKAKESWEMNSEEKLEQSTIVKERGTVYFKEG------------KYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLA 197 (336)
T ss_dssp ECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHH
T ss_pred ccccchhcCCHHHHHHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHH
Confidence 46777788889999999999999999998886 4899999999999999999 59
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHH
Q 009766 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLS 186 (526)
Q Consensus 107 AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~ 186 (526)
+|..++.++.+++ .+++++.+|+++++++|.|..+|..++.++..++.+. +++++++++++.+|.|..+|..++.++.
T Consensus 198 ~~~nla~~~~~~g-~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~-~A~~~~~~al~l~P~~~~a~~~l~~~~~ 275 (336)
T 1p5q_A 198 SHLNLAMCHLKLQ-AFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFE-LARADFQKVLQLYPNNKAAKTQLAVCQQ 275 (336)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 9999999999985 9999999999999999999999999999999999984 8999999999999999999999999998
Q ss_pred Hhhh
Q 009766 187 NLLK 190 (526)
Q Consensus 187 ~L~~ 190 (526)
.++.
T Consensus 276 ~~~~ 279 (336)
T 1p5q_A 276 RIRR 279 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 78
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.07 E-value=5.9e-10 Score=97.25 Aligned_cols=125 Identities=6% Similarity=-0.140 Sum_probs=111.4
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhc
Q 009766 92 RVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNN 171 (526)
Q Consensus 92 ~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~n 171 (526)
..+.+++..+|++..+|+.++.++...+ .+++++..+++++..+|.|..+|...+.++..++.+ +++++++++++..+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~-~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAG-KWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLY-EQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhH-HHHHHHHHHHHhcC
Confidence 4667788899999999999999998874 899999999999999999999999999999999998 48999999999999
Q ss_pred cCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHH
Q 009766 172 FSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWL 230 (526)
Q Consensus 172 PsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~L 230 (526)
|.|..+|++++.++..+++ ++++++.+.+++.++|++...+..+..+
T Consensus 83 p~~~~~~~~lg~~~~~~g~------------~~~A~~~~~~al~~~p~~~~~~~~~~~~ 129 (142)
T 2xcb_A 83 INEPRFPFHAAECHLQLGD------------LDGAESGFYSARALAAAQPAHEALAARA 129 (142)
T ss_dssp TTCTHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHHTCGGGHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCC------------HHHHHHHHHHHHHhCCCCcchHHHHHHH
Confidence 9999999999999998875 7999999999999999998877655443
No 79
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.05 E-value=3e-09 Score=94.36 Aligned_cols=116 Identities=12% Similarity=-0.030 Sum_probs=107.7
Q ss_pred CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 009766 55 NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQK 134 (526)
Q Consensus 55 NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLe 134 (526)
+++...+|..++.++...+ .+++++.++++++..+|++..+|..++.++...+ .+++++..++++++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~ 73 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARK------------EYSKAIDLYTQALSIAPANPIYLSNRAAAYSASG-QHEKAAEDAELATV 73 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHH
Confidence 5667889999999988876 5899999999999999999999999999999885 99999999999999
Q ss_pred hCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHH
Q 009766 135 ADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLL 184 (526)
Q Consensus 135 iDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~L 184 (526)
++|.+..+|..++.++..++.+. ++++++.++++.+|.|..+|..++..
T Consensus 74 ~~p~~~~~~~~lg~~~~~~g~~~-~A~~~~~~al~~~p~~~~~~~~~~l~ 122 (164)
T 3sz7_A 74 VDPKYSKAWSRLGLARFDMADYK-GAKEAYEKGIEAEGNGGSDAMKRGLE 122 (164)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHccCHH-HHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 99999999999999999999984 89999999999999999999887765
No 80
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.05 E-value=2.8e-09 Score=99.25 Aligned_cols=146 Identities=8% Similarity=-0.055 Sum_probs=117.2
Q ss_pred cHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHH----------------HHHHHHhCCCC
Q 009766 58 LYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHH----------------RKWILSKGHSS 121 (526)
Q Consensus 58 ~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~H----------------RrwvL~kl~~~ 121 (526)
....+..++..+...+ .+++++.++++++..+|++..+|+. ++.++...+ .
T Consensus 3 ~~~~~~~~g~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g-~ 69 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAG------------QNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNR-N 69 (208)
T ss_dssp CHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTT-C
T ss_pred CHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCC-C
Confidence 3455667777777665 5899999999999999999999999 999998885 9
Q ss_pred hHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhh
Q 009766 122 IDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEK 201 (526)
Q Consensus 122 ~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~e 201 (526)
+++++..++++++++|.+..+|..++.++...|.+. +++++++++++.+|.|..+|++++.++...+..
T Consensus 70 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~-~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~---------- 138 (208)
T 3urz_A 70 YDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEK-DALRMYEKILQLEADNLAANIFLGNYYYLTAEQ---------- 138 (208)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH-HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH----------
Confidence 999999999999999999999999999999999984 899999999999999999999999988665431
Q ss_pred hHHHHHHHHHHHHHhCCCCcccHHHHH
Q 009766 202 VLPDEYEFVHQAIFTDPDDQSGWFYHL 228 (526)
Q Consensus 202 ileeELe~v~~AI~~dP~DeSaW~Y~r 228 (526)
........+.+++..+|. ..+|++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~-~~a~~~~g 164 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKM-QYARYRDG 164 (208)
T ss_dssp HHHHHHHHHC---CCCHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCch-hHHHHHHH
Confidence 134555666666643332 23454433
No 81
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.04 E-value=6.9e-09 Score=90.07 Aligned_cols=151 Identities=10% Similarity=0.052 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCC
Q 009766 59 YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSR 138 (526)
Q Consensus 59 ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDpr 138 (526)
..+|..++.+....+ .+++++..+++++..+|++..+|...+.++...+ .+++++.+++++++.+|.
T Consensus 8 ~~~~~~~~~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~~~~~~~~ 74 (186)
T 3as5_A 8 QVYYRDKGISHAKAG------------RYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTG-AVDRGTELLERSLADAPD 74 (186)
T ss_dssp HHHHHHHHHHHHHHT------------CHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHHhc------------CHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCC
Confidence 456777777777765 5899999999999999999999999999998874 899999999999999999
Q ss_pred ChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCC
Q 009766 139 NFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDP 218 (526)
Q Consensus 139 NyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP 218 (526)
+..+|...+.+....+.+ +++++++++++..+|.+..+|...+.++...++ ++++++.+.+++..+|
T Consensus 75 ~~~~~~~~a~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~------------~~~A~~~~~~~~~~~~ 141 (186)
T 3as5_A 75 NVKVATVLGLTYVQVQKY-DLAVPLLIKVAEANPINFNVRFRLGVALDNLGR------------FDEAIDSFKIALGLRP 141 (186)
T ss_dssp CHHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHhcCH-HHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCc------------HHHHHHHHHHHHhcCc
Confidence 999999999999999988 489999999999999999999999998887764 6999999999999999
Q ss_pred CCcccHHHHHHHHcccc
Q 009766 219 DDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 219 ~DeSaW~Y~r~LL~~~~ 235 (526)
++..+|.....++....
T Consensus 142 ~~~~~~~~la~~~~~~~ 158 (186)
T 3as5_A 142 NEGKVHRAIAFSYEQMG 158 (186)
T ss_dssp TCHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHcC
Confidence 99999987777776543
No 82
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.04 E-value=3.2e-09 Score=104.18 Aligned_cols=162 Identities=9% Similarity=-0.034 Sum_probs=136.9
Q ss_pred HHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChH
Q 009766 27 LQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG 106 (526)
Q Consensus 27 l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~ 106 (526)
+...-......|++ ++|+..+.++|..+|++..+|...+.++...+ .+++++..+++++..+|.+..
T Consensus 120 ~~~~a~~~~~~g~~-~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g------------~~~~A~~~l~~~~~~~p~~~~ 186 (287)
T 3qou_A 120 XAQQAMQLMQESNY-TDALPLLXDAWQLSNQNGEIGLLLAETLIALN------------RSEDAEAVLXTIPLQDQDTRY 186 (287)
T ss_dssp HHHHHHHHHHTTCH-HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTT------------CHHHHHHHHTTSCGGGCSHHH
T ss_pred HHHHHHHHHhCCCH-HHHHHHHHHHHHhCCcchhHHHHHHHHHHHCC------------CHHHHHHHHHhCchhhcchHH
Confidence 34444556678999 89999999999999999999999999999887 489999999999999997766
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCC--hhHHHHHHHH
Q 009766 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSN--YSAWHNRSLL 184 (526)
Q Consensus 107 AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsN--ySAW~yR~~L 184 (526)
.+...+..+.... ..+++++.+.++++.+|.|..+|...+-++...|++. ++++.+.++++.+|.+ ..+|...+.+
T Consensus 187 ~~~~~~~~l~~~~-~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~-~A~~~l~~~l~~~p~~~~~~a~~~l~~~ 264 (287)
T 3qou_A 187 QGLVAQIELLXQA-ADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNE-EALELLFGHLRXDLTAADGQTRXTFQEI 264 (287)
T ss_dssp HHHHHHHHHHHHH-TSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCTTGGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhhc-ccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHH-HHHHHHHHHHhcccccccchHHHHHHHH
Confidence 6655555454442 5678999999999999999999999999999999984 8999999999999999 8899999999
Q ss_pred HHHhhhhhccCccchhhhHHHHHHHHHHHHH
Q 009766 185 LSNLLKRKVEGFVSKEKVLPDEYEFVHQAIF 215 (526)
Q Consensus 185 L~~L~~~~~~g~~~~~eileeELe~v~~AI~ 215 (526)
+..+++ .++++..+.+++.
T Consensus 265 ~~~~g~------------~~~a~~~~r~al~ 283 (287)
T 3qou_A 265 LAALGT------------GDALASXYRRQLY 283 (287)
T ss_dssp HHHHCT------------TCHHHHHHHHHHH
T ss_pred HHHcCC------------CCcHHHHHHHHHH
Confidence 998875 3556666666553
No 83
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.02 E-value=3.3e-09 Score=94.62 Aligned_cols=129 Identities=11% Similarity=0.017 Sum_probs=113.6
Q ss_pred hhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 009766 35 HHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWI 114 (526)
Q Consensus 35 ~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwv 114 (526)
...|+| ++|+..+.+++..+|++..+|...+.++...+ .+++++.++++++..+|.+..+|...+.+
T Consensus 21 ~~~~~~-~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~------------~~~~A~~~~~~al~~~p~~~~~~~~la~~ 87 (177)
T 2e2e_A 21 ASQQNP-EAQLQALQDKIRANPQNSEQWALLGEYYLWQN------------DYSNSLLAYRQALQLRGENAELYAALATV 87 (177)
T ss_dssp C------CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred hhccCH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 456777 78999999999999999999999999998886 48999999999999999999999999998
Q ss_pred -HHhCCCCh--HHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHH
Q 009766 115 -LSKGHSSI--DNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAW 178 (526)
Q Consensus 115 -L~kl~~~~--eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW 178 (526)
.... +.+ ++++.+++++++.+|.+..+|...+.+....|.+ +++++++.+++..+|.+...+
T Consensus 88 l~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~-~~A~~~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 88 LYYQA-SQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANY-AQAIELWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHHHT-TTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHTCCTTSCHH
T ss_pred HHHhc-CCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccH-HHHHHHHHHHHhhCCCCccHH
Confidence 5455 367 9999999999999999999999999999999998 489999999999999997654
No 84
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.01 E-value=9.2e-10 Score=102.53 Aligned_cols=106 Identities=8% Similarity=-0.024 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCC-------Chh-----hhhHHHHHHHHhCcChHHHHHHHHHHHHh---
Q 009766 106 GAWHHRKWILSKGHSSIDNELRLLDKFQKADSR-------NFH-----AWNYRRFVAASMNRSEEDELKYTEDMICN--- 170 (526)
Q Consensus 106 ~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDpr-------Nyh-----AW~yRr~lL~~Lg~~~eeELe~tdkaI~~--- 170 (526)
..|..++-.+...+ .|++++.+|+++|+++|. +.. +|.+|+.++..+|++. +++++++++|++
T Consensus 12 ~~~~~~G~~l~~~g-~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~-eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 12 YLALSDAQRQLVAG-EYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFD-EALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCC-CHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHhhhc
Confidence 45677888888774 899999999999999999 444 9999999999999994 899999999999
Q ss_pred ----ccCChhHH----HHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHH
Q 009766 171 ----NFSNYSAW----HNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWF 225 (526)
Q Consensus 171 ----nPsNySAW----~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~ 225 (526)
+|.+..+| ++|+.++..+++ ++++++++++++.++|+|.....
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr------------~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGR------------GAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHHHCCSCCT
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCC------------HHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999 999999999986 79999999999999999987653
No 85
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.01 E-value=5.2e-09 Score=93.33 Aligned_cols=131 Identities=8% Similarity=-0.023 Sum_probs=116.0
Q ss_pred hhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHH-HHHhCcC-hHHHHH
Q 009766 85 SILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFV-AASMNRS-EEDELK 162 (526)
Q Consensus 85 ~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~l-L~~Lg~~-~eeELe 162 (526)
..+++++..++.++..+|.+..+|...+.++...+ .+++++.+++++++++|.|..+|...+.+ ....+.+ .+++++
T Consensus 24 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~ 102 (177)
T 2e2e_A 24 QNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQN-DYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRA 102 (177)
T ss_dssp ---CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHH
Confidence 56788999999999999999999999999998885 89999999999999999999999999999 6677876 248999
Q ss_pred HHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHH
Q 009766 163 YTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHL 228 (526)
Q Consensus 163 ~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r 228 (526)
++++++..+|.+..+|...+.++...+. +++++..+.+++..+|++...+....
T Consensus 103 ~~~~al~~~p~~~~~~~~la~~~~~~g~------------~~~A~~~~~~al~~~p~~~~~~~~~~ 156 (177)
T 2e2e_A 103 MIDKALALDSNEITALMLLASDAFMQAN------------YAQAIELWQKVMDLNSPRINRTQLVE 156 (177)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHTCCTTSCHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHccc------------HHHHHHHHHHHHhhCCCCccHHHHHH
Confidence 9999999999999999999999888765 79999999999999999987765443
No 86
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.00 E-value=3.5e-09 Score=89.45 Aligned_cols=117 Identities=8% Similarity=-0.048 Sum_probs=105.6
Q ss_pred CCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHH
Q 009766 102 FKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNR 181 (526)
Q Consensus 102 PKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR 181 (526)
|....+|..++..+...+ .+++++.+++++++++|.+..+|..++.+...++.+. +++++++++++.+|.+..+|..+
T Consensus 1 p~~a~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~-~A~~~~~~al~~~p~~~~~~~~l 78 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKS-DWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFP-EAIADCNKAIEKDPNFVRAYIRK 78 (126)
T ss_dssp CHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHH-HHHHHHHHHHHhCCCcHHHHHHH
Confidence 445678888998888874 8999999999999999999999999999999999984 89999999999999999999999
Q ss_pred HHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhC------CCCcccHHHHHHHHc
Q 009766 182 SLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTD------PDDQSGWFYHLWLLD 232 (526)
Q Consensus 182 ~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~d------P~DeSaW~Y~r~LL~ 232 (526)
+.++..++. ++++++.+.+++.++ |++..++.....+..
T Consensus 79 g~~~~~~~~------------~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 79 ATAQIAVKE------------YASALETLDAARTKDAEVNNGSSAREIDQLYYKASQ 123 (126)
T ss_dssp HHHHHHTTC------------HHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhC------------HHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHH
Confidence 999998875 799999999999999 999988877665543
No 87
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.99 E-value=1.1e-08 Score=100.13 Aligned_cols=166 Identities=7% Similarity=-0.079 Sum_probs=131.6
Q ss_pred HhhcCCCcHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC---
Q 009766 34 NHHNHIYSKEAVELSTKLLETNPE------LYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS--- 104 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iNPd------~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs--- 104 (526)
.+..|.| ++|+..+.+++.+.++ ...+|+..+.++..++ .+++++.++++++.+.|+.
T Consensus 47 ~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g------------~~~~A~~~~~~Al~l~~~~g~~ 113 (292)
T 1qqe_A 47 YRLRKEL-NLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGG------------NSVNAVDSLENAIQIFTHRGQF 113 (292)
T ss_dssp HHHTTCT-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHcCCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHHHHHcCCH
Confidence 3467999 8999999999998543 2678999999998886 4899999999999988764
Q ss_pred ---hHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCC------hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCCh
Q 009766 105 ---YGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRN------FHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175 (526)
Q Consensus 105 ---y~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprN------yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNy 175 (526)
..+|+..+.++....+.+++++++++++++++|.+ ..++...+.++..+|.+. ++++++++++..+|.+.
T Consensus 114 ~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~-~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 114 RRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYI-EASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHhcCC
Confidence 46888888888874138999999999999998865 457888899999999984 89999999999999875
Q ss_pred h-------HHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHH
Q 009766 176 S-------AWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWF 225 (526)
Q Consensus 176 S-------AW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~ 225 (526)
. +|..++.++..++. +++++.++.+++.++|+...+..
T Consensus 193 ~~~~~~~~~~~~lg~~~~~~g~------------~~~A~~~~~~al~l~p~~~~~~~ 237 (292)
T 1qqe_A 193 LSQWSLKDYFLKKGLCQLAATD------------AVAAARTLQEGQSEDPNFADSRE 237 (292)
T ss_dssp TTGGGHHHHHHHHHHHHHHTTC------------HHHHHHHHHGGGCC---------
T ss_pred cccHHHHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHhhCCCCCCcHH
Confidence 4 56667777766654 79999999999999999876653
No 88
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.99 E-value=5.2e-09 Score=92.80 Aligned_cols=116 Identities=9% Similarity=-0.026 Sum_probs=105.9
Q ss_pred CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHH
Q 009766 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHN 180 (526)
Q Consensus 101 NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~y 180 (526)
++++..+|..++.++...+ .+++++.+++++++++|.+..+|..++.++..++.+. +++++++++++.+|.+..+|++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~-~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARK-EYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHE-KAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHH-HHHHHHHHHHHhCCCCHHHHHH
Confidence 5667788999999998874 9999999999999999999999999999999999984 8999999999999999999999
Q ss_pred HHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHH
Q 009766 181 RSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWL 230 (526)
Q Consensus 181 R~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~L 230 (526)
++.++..+++ ++++++++.+++.++|++..+|..+...
T Consensus 85 lg~~~~~~g~------------~~~A~~~~~~al~~~p~~~~~~~~~~l~ 122 (164)
T 3sz7_A 85 LGLARFDMAD------------YKGAKEAYEKGIEAEGNGGSDAMKRGLE 122 (164)
T ss_dssp HHHHHHHTTC------------HHHHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred HHHHHHHccC------------HHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 9999998875 7999999999999999999999555443
No 89
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.98 E-value=1.6e-08 Score=95.92 Aligned_cols=157 Identities=6% Similarity=-0.125 Sum_probs=132.4
Q ss_pred HHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHhCCCChHHHHHH
Q 009766 52 LETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS---YGAWHHRKWILSKGHSSIDNELRL 128 (526)
Q Consensus 52 L~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs---y~AW~HRrwvL~kl~~~~eeELe~ 128 (526)
...+|++..++..++..+...+ .+++++..+++++..+|.+ ..+|..++.++.+.+ .+++++..
T Consensus 8 ~~~~~~~~~~~~~~a~~~~~~g------------~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~-~~~~A~~~ 74 (261)
T 3qky_A 8 GRLRHSSPQEAFERAMEFYNQG------------KYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNK-EYLLAASE 74 (261)
T ss_dssp ---CCSSHHHHHHHHHHHHHTT------------CHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTT-CHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhC------------CHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhC-cHHHHHHH
Confidence 4578999999999999988886 5899999999999999999 999999999999885 99999999
Q ss_pred HHHHHHhCCCC---hhhhhHHHHHHHH--------hCcChHHHHHHHHHHHHhccCChhHH-----------------HH
Q 009766 129 LDKFQKADSRN---FHAWNYRRFVAAS--------MNRSEEDELKYTEDMICNNFSNYSAW-----------------HN 180 (526)
Q Consensus 129 ~dkaLeiDprN---yhAW~yRr~lL~~--------Lg~~~eeELe~tdkaI~~nPsNySAW-----------------~y 180 (526)
++++++.+|.+ ..+|...+.+... .+.+ +++++.+++++..+|.+..++ .+
T Consensus 75 ~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~-~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~ 153 (261)
T 3qky_A 75 YERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDT-RKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYE 153 (261)
T ss_dssp HHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHH-HHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhH-HHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998855 5688899999888 7777 489999999999999998887 56
Q ss_pred HHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCc---ccHHHHHHHHccc
Q 009766 181 RSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQ---SGWFYHLWLLDQT 234 (526)
Q Consensus 181 R~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~De---SaW~Y~r~LL~~~ 234 (526)
++.++...+. +++++..+.+++..+|++. .+|+.+..++..+
T Consensus 154 la~~~~~~g~------------~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 154 AARLYERREL------------YEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHTTC------------HHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccC------------HHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 6666665543 7999999999999999954 4777766666543
No 90
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.97 E-value=1.2e-09 Score=115.02 Aligned_cols=135 Identities=14% Similarity=-0.074 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC---------------hH
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS---------------YG 106 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs---------------y~ 106 (526)
++|+..+..++..+|+...+|+.++.++...+ .+.+++.+++++|..+|.+ ..
T Consensus 251 ~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g------------~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~ 318 (457)
T 1kt0_A 251 EKAKESWEMDTKEKLEQAAIVKEKGTVYFKGG------------KYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLA 318 (457)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHH
T ss_pred ccCcchhhcCHHHHHHHHHHHHHHHHHHHhCC------------CHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHH
Confidence 46777888889999999999999999998886 4899999999999999999 69
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHH
Q 009766 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLS 186 (526)
Q Consensus 107 AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~ 186 (526)
+|..++.++.+++ .+++++.+|+++++++|.|..+|.+|+.++..++.+. ++++++.++++.+|+|..+|..++.++.
T Consensus 319 ~~~nla~~~~~~g-~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~-~A~~~~~~al~l~P~~~~a~~~l~~~~~ 396 (457)
T 1kt0_A 319 AFLNLAMCYLKLR-EYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFE-SAKGDFEKVLEVNPQNKAARLQISMCQK 396 (457)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHTTC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHH-HHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999985 9999999999999999999999999999999999984 8999999999999999999999999998
Q ss_pred Hhhh
Q 009766 187 NLLK 190 (526)
Q Consensus 187 ~L~~ 190 (526)
.++.
T Consensus 397 ~~~~ 400 (457)
T 1kt0_A 397 KAKE 400 (457)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 91
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.97 E-value=2.5e-09 Score=96.37 Aligned_cols=155 Identities=9% Similarity=-0.036 Sum_probs=123.6
Q ss_pred CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 009766 55 NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQK 134 (526)
Q Consensus 55 NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLe 134 (526)
||.....+..++.++...+ .+++++..+++++..+|++..+|...+.++...+ .+++++..+++++.
T Consensus 2 ~~~~~~~~~~~a~~~~~~g------------~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g-~~~~A~~~~~~a~~ 68 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQG------------EHAQALNVIQTLSDELQSRGDVKLAKADCLLETK-QFELAQELLATIPL 68 (176)
T ss_dssp ----CTTHHHHHHHHHHTT------------CHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTT-CHHHHHHHHTTCCG
T ss_pred CCCHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCC-CHHHHHHHHHHhhh
Confidence 5555566667777776665 5899999999999999999999999999999885 89999999999999
Q ss_pred hCCCChhhhhHHHHHHH-HhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHH
Q 009766 135 ADSRNFHAWNYRRFVAA-SMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQA 213 (526)
Q Consensus 135 iDprNyhAW~yRr~lL~-~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~A 213 (526)
.+| +...+...+.+.. ..+.. .++++.++++++.+|.|..+|+..+.++...++ ++++++.+.++
T Consensus 69 ~~p-~~~~~~~~~~~~~~~~~~~-~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~------------~~~A~~~~~~~ 134 (176)
T 2r5s_A 69 EYQ-DNSYKSLIAKLELHQQAAE-SPELKRLEQELAANPDNFELACELAVQYNQVGR------------DEEALELLWNI 134 (176)
T ss_dssp GGC-CHHHHHHHHHHHHHHHHTS-CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHH
T ss_pred ccC-ChHHHHHHHHHHHHhhccc-chHHHHHHHHHHhCCCCHHHHHHHHHHHHHccc------------HHHHHHHHHHH
Confidence 999 7766555544421 11122 246899999999999999999999999998875 79999999999
Q ss_pred HHhCCCC--cccHHHHHHHHccccC
Q 009766 214 IFTDPDD--QSGWFYHLWLLDQTVR 236 (526)
Q Consensus 214 I~~dP~D--eSaW~Y~r~LL~~~~~ 236 (526)
+..+|+. ..+|.....++.....
T Consensus 135 l~~~p~~~~~~a~~~l~~~~~~~g~ 159 (176)
T 2r5s_A 135 LKVNLGAQDGEVKKTFMDILSALGQ 159 (176)
T ss_dssp HTTCTTTTTTHHHHHHHHHHHHHCS
T ss_pred HHhCcccChHHHHHHHHHHHHHhCC
Confidence 9999986 4588877777766543
No 92
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.97 E-value=1.8e-08 Score=98.90 Aligned_cols=160 Identities=9% Similarity=-0.028 Sum_probs=138.5
Q ss_pred HHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHH
Q 009766 51 LLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLD 130 (526)
Q Consensus 51 aL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~d 130 (526)
+...-|++..++...+..+...+ .+++++..+++++..+|++..+|.....++...+ .++++++.++
T Consensus 109 l~~~lp~~~~~~~~~a~~~~~~g------------~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g-~~~~A~~~l~ 175 (287)
T 3qou_A 109 LDXVLPREEELXAQQAMQLMQES------------NYTDALPLLXDAWQLSNQNGEIGLLLAETLIALN-RSEDAEAVLX 175 (287)
T ss_dssp HHHHSCCHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTT-CHHHHHHHHT
T ss_pred HHHHcCCchhhHHHHHHHHHhCC------------CHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCC-CHHHHHHHHH
Confidence 33445999999999998888776 4899999999999999999999999999998885 9999999999
Q ss_pred HHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHH
Q 009766 131 KFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFV 210 (526)
Q Consensus 131 kaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v 210 (526)
+++..+|.+...+...+..+...+... ++++.+.+++..+|.|..+|+..+.++...++ ++++++.+
T Consensus 176 ~~~~~~p~~~~~~~~~~~~l~~~~~~~-~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~------------~~~A~~~l 242 (287)
T 3qou_A 176 TIPLQDQDTRYQGLVAQIELLXQAADT-PEIQQLQQQVAENPEDAALATQLALQLHQVGR------------NEEALELL 242 (287)
T ss_dssp TSCGGGCSHHHHHHHHHHHHHHHHTSC-HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHH
T ss_pred hCchhhcchHHHHHHHHHHHHhhcccC-ccHHHHHHHHhcCCccHHHHHHHHHHHHHccc------------HHHHHHHH
Confidence 999999977666666666566666664 68999999999999999999999999998875 79999999
Q ss_pred HHHHHhCCCC--cccHHHHHHHHccccC
Q 009766 211 HQAIFTDPDD--QSGWFYHLWLLDQTVR 236 (526)
Q Consensus 211 ~~AI~~dP~D--eSaW~Y~r~LL~~~~~ 236 (526)
.+++..+|++ ..+|..+..++....+
T Consensus 243 ~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 270 (287)
T 3qou_A 243 FGHLRXDLTAADGQTRXTFQEILAALGT 270 (287)
T ss_dssp HHHHHHCTTGGGGHHHHHHHHHHHHHCT
T ss_pred HHHHhcccccccchHHHHHHHHHHHcCC
Confidence 9999999999 7889888888876544
No 93
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.96 E-value=2.9e-09 Score=99.18 Aligned_cols=112 Identities=11% Similarity=-0.012 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCC-------ChH-----HHHHHHHHHHhCCCChHHHH
Q 009766 59 YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFK-------SYG-----AWHHRKWILSKGHSSIDNEL 126 (526)
Q Consensus 59 ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPK-------sy~-----AW~HRrwvL~kl~~~~eeEL 126 (526)
...|..++..+...+ .+++++.+|+++|+.+|. +.. +|++|+.++..++ ++++++
T Consensus 11 a~~~~~~G~~l~~~g------------~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lg-r~~eAl 77 (159)
T 2hr2_A 11 AYLALSDAQRQLVAG------------EYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLR-SFDEAL 77 (159)
T ss_dssp HHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTT-CHHHHH
T ss_pred HHHHHHHHHHHHHCC------------CHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCC-CHHHHH
Confidence 456778888888886 599999999999999999 444 9999999999995 999999
Q ss_pred HHHHHHHHh-------CCCChhhh----hHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHH
Q 009766 127 RLLDKFQKA-------DSRNFHAW----NYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLL 184 (526)
Q Consensus 127 e~~dkaLei-------DprNyhAW----~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~L 184 (526)
.+|+++|++ +|.+..+| +.|+.++..+++++ +++++++++|+++|.|-....-+.-+
T Consensus 78 ~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~e-EAl~~y~kAlel~p~d~~~~~~~~~~ 145 (159)
T 2hr2_A 78 HSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGA-EAMPEFKKVVEMIEERKGETPGKERM 145 (159)
T ss_dssp HHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHCCSCCTTHHHH
T ss_pred HHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHH-HHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 999999999 99999999 99999999999995 89999999999999987654443333
No 94
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.94 E-value=5.6e-08 Score=79.40 Aligned_cols=135 Identities=19% Similarity=0.206 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCC
Q 009766 60 TAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRN 139 (526)
Q Consensus 60 tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprN 139 (526)
.+|+..+.++...+ .+++++..++.++..+|.+..+|.....++...+ .+++++.++++++..+|.+
T Consensus 2 ~~~~~l~~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~~~~~~~~~ 68 (136)
T 2fo7_A 2 EAWYNLGNAYYKQG------------DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG-DYDEAIEYYQKALELDPRS 68 (136)
T ss_dssp HHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHHHHcC------------cHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhc-CHHHHHHHHHHHHHHCCCc
Confidence 46777777777665 4899999999999999999999999888887764 8999999999999999999
Q ss_pred hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCC
Q 009766 140 FHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPD 219 (526)
Q Consensus 140 yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~ 219 (526)
..+|...+.+....+.+ +++++++++++..+|.+..+|...+.++...+. +++++..+.+++..+|+
T Consensus 69 ~~~~~~l~~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~------------~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 69 AEAWYNLGNAYYKQGDY-DEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD------------YDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHHHHHHHHHHTTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC------------HHHHHHHHHHHHHHSTT
T ss_pred hHHHHHHHHHHHHhcCH-HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHcc------------HHHHHHHHHHHHccCCC
Confidence 99999999999888888 489999999999999999999998888876654 68999999999999987
Q ss_pred C
Q 009766 220 D 220 (526)
Q Consensus 220 D 220 (526)
+
T Consensus 136 ~ 136 (136)
T 2fo7_A 136 S 136 (136)
T ss_dssp C
T ss_pred C
Confidence 4
No 95
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.94 E-value=1.9e-08 Score=106.04 Aligned_cols=173 Identities=8% Similarity=-0.058 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHh-------hhcCCCCCCchhhhhHHHHHHHHHHHHH-hCCCChHHHHHHHH
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQH-------KLTENDSDPDSLKSILDEELRVVESALR-QNFKSYGAWHHRKW 113 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~-------L~~~~~sdPe~~~~~~~eEL~~~e~aL~-~NPKsy~AW~HRrw 113 (526)
.+++.+++++|..+|.+..+|...+.++.. .+. .+......++++.++++++. .+|++..+|....-
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~-----~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~ 329 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGD-----MNNAKLFSDEAANIYERAISTLLKKNMLLYFAYAD 329 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTC-----CHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccc-----hhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 478899999999999999999999998876 331 10000012488999999997 89999999999999
Q ss_pred HHHhCCCChHHHHHHHHHHHHhCCCCh-hhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHH-Hhhhh
Q 009766 114 ILSKGHSSIDNELRLLDKFQKADSRNF-HAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLS-NLLKR 191 (526)
Q Consensus 114 vL~kl~~~~eeELe~~dkaLeiDprNy-hAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~-~L~~~ 191 (526)
+....+ .++++.+.++++++++|.+. .+|...+.+..+.+.+ +++.+.+.++++..|.++..|.....+.. ..+
T Consensus 330 ~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~-~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~-- 405 (530)
T 2ooe_A 330 YEESRM-KYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGI-KSGRMIFKKAREDARTRHHVYVTAALMEYYCSK-- 405 (530)
T ss_dssp HHHHTT-CHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTC--
T ss_pred HHHhcC-CHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCH-HHHHHHHHHHHhccCCchHHHHHHHHHHHHHcC--
Confidence 888874 89999999999999999986 5999998888888876 47899999999998888777665444421 122
Q ss_pred hccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 192 KVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 192 ~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
-++++...+.+++..+|++...|.....++..
T Consensus 406 ----------~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~ 437 (530)
T 2ooe_A 406 ----------DKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 437 (530)
T ss_dssp ----------CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred ----------ChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHh
Confidence 25889999999999999999999766666544
No 96
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.92 E-value=2e-08 Score=83.28 Aligned_cols=121 Identities=11% Similarity=0.050 Sum_probs=109.9
Q ss_pred hCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 009766 54 TNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQ 133 (526)
Q Consensus 54 iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaL 133 (526)
..|....+|+.++.++...+ .+++++.++++++..+|++..+|..++.++...+ .+++++.++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~------------~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~a~ 77 (133)
T 2lni_A 11 MNPDLALMVKNKGNECFQKG------------DYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLL-EFQLALKDCEECI 77 (133)
T ss_dssp SSSCHHHHHHHHHHHHHHTT------------CSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTT-CHHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhc-cHHHHHHHHHHHH
Confidence 35788899999999888876 4799999999999999999999999999998774 8999999999999
Q ss_pred HhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHh
Q 009766 134 KADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNL 188 (526)
Q Consensus 134 eiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L 188 (526)
+.+|.+..+|...+.+...++.+ +++++++.++++.+|.+..+|...+.++...
T Consensus 78 ~~~~~~~~~~~~la~~~~~~~~~-~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 78 QLEPTFIKGYTRKAAALEAMKDY-TKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred HhCCCchHHHHHHHHHHHHHhhH-HHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 99999999999999999999998 4899999999999999999999888877654
No 97
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.91 E-value=9e-08 Score=78.17 Aligned_cols=125 Identities=21% Similarity=0.221 Sum_probs=113.4
Q ss_pred hhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 009766 35 HHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWI 114 (526)
Q Consensus 35 ~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwv 114 (526)
...|++ ++|+..+.+++..+|++..+|+..+.++...+ .+++++.++++++..+|.+..+|.....+
T Consensus 12 ~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 78 (136)
T 2fo7_A 12 YKQGDY-DEAIEYYQKALELDPRSAEAWYNLGNAYYKQG------------DYDEAIEYYQKALELDPRSAEAWYNLGNA 78 (136)
T ss_dssp HHHTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHcCcH-HHHHHHHHHHHHcCCcchhHHHHHHHHHHHhc------------CHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 456788 89999999999999999999999988887775 48999999999999999999999999998
Q ss_pred HHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCC
Q 009766 115 LSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSN 174 (526)
Q Consensus 115 L~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsN 174 (526)
+...+ .+++++..++++++.+|.+..+|...+.+....+.+ +++++++.+++..+|.+
T Consensus 79 ~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 79 YYKQG-DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDY-DEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHTTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH-HHHHHHHHHHHHHSTTC
T ss_pred HHHhc-CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccH-HHHHHHHHHHHccCCCC
Confidence 88774 899999999999999999999999999999888888 47999999999998864
No 98
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.91 E-value=3.4e-08 Score=99.49 Aligned_cols=124 Identities=11% Similarity=-0.023 Sum_probs=109.4
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHH
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPEL---------------YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVE 95 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~---------------ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e 95 (526)
-......|+| ++|+..+.++|.++|++ ..+|+.++.++..++ .+++++.+++
T Consensus 154 g~~~~~~g~~-~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g------------~~~~A~~~~~ 220 (336)
T 1p5q_A 154 GTVYFKEGKY-KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQ------------AFSAAIESCN 220 (336)
T ss_dssp HHHHHHHTCH-HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHH
T ss_pred HHHHHHCCCH-HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcC------------CHHHHHHHHH
Confidence 3344567899 89999999999999999 699999999999987 4899999999
Q ss_pred HHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHH
Q 009766 96 SALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMI 168 (526)
Q Consensus 96 ~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI 168 (526)
++|..+|++..+|+.++.++..++ .+++++..++++++++|.|..+|...+.+...++.+.+.+-+.+.+++
T Consensus 221 ~al~~~p~~~~a~~~lg~~~~~~g-~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 221 KALELDSNNEKGLSRRGEAHLAVN-DFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999985 999999999999999999999999999999988877544455554444
No 99
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.90 E-value=1e-07 Score=82.20 Aligned_cols=126 Identities=16% Similarity=0.077 Sum_probs=100.5
Q ss_pred HHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChH
Q 009766 27 LQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG 106 (526)
Q Consensus 27 l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~ 106 (526)
+...-......|+| ++|+..+.+++..+|++..+|..++.++..++ .+++++.++++++..+|++..
T Consensus 16 ~~~~a~~~~~~~~~-~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~------------~~~~A~~~~~~a~~~~~~~~~ 82 (166)
T 1a17_A 16 LKTQANDYFKAKDY-ENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE------------CYGYALGDATRAIELDKKYIK 82 (166)
T ss_dssp HHHHHHHHHHTTCH-HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHccCH-HHHHHHHHHHHHhCCCChHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCcccHH
Confidence 33333444567888 89999999999999999999999999988876 489999999999999999999
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHH--HHHhCcChHHHHHHHHHH
Q 009766 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFV--AASMNRSEEDELKYTEDM 167 (526)
Q Consensus 107 AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~l--L~~Lg~~~eeELe~tdka 167 (526)
+|...+.++...+ .+++++.+++++++.+|.+..+|.+...+ ....+.+ +++++.+.+.
T Consensus 83 ~~~~~a~~~~~~~-~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~-~~A~~~~~~~ 143 (166)
T 1a17_A 83 GYYRRAASNMALG-KFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAF-ERAIAGDEHK 143 (166)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH-HHHHHcccch
Confidence 9999999998885 89999999999999999999888665555 3333444 2455544443
No 100
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.89 E-value=1.9e-08 Score=98.63 Aligned_cols=165 Identities=13% Similarity=-0.011 Sum_probs=128.0
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHH
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHH 110 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~H 110 (526)
-......|+| ++|+..+.++|..+|++..+|..++.++..++ .+++++..+++++..+|.+..+|+.
T Consensus 11 g~~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~------------~~~~A~~~~~~al~~~p~~~~~~~~ 77 (281)
T 2c2l_A 11 GNRLFVGRKY-PEAAACYGRAITRNPLVAVYYTNRALCYLKMQ------------QPEQALADCRRALELDGQSVKAHFF 77 (281)
T ss_dssp HHHHHHTTCH-HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHTTSCTTCHHHHHH
T ss_pred HHHHHHcCCH-HHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc------------CHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 3345567899 89999999999999999999999999999887 4899999999999999999999999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhh
Q 009766 111 RKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLK 190 (526)
Q Consensus 111 RrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~ 190 (526)
++.++..++ .+++++..+.++++++|.+........|...... +...+........+.+.....+.+.++..
T Consensus 78 lg~~~~~~g-~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~l~~~--- 149 (281)
T 2c2l_A 78 LGQCQLEME-SYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIA----KKKRWNSIEERRIHQESELHSYLTRLIAA--- 149 (281)
T ss_dssp HHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHH----HHHHHHHHHHTCCCCCCHHHHHHHHHHHH---
T ss_pred HHHHHHHcC-CHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHH----HHHHHHHHHHHHHhhhHHHHHHHHHHHHH---
Confidence 999999885 9999999999999999987555443333332221 22233333345678888888777776532
Q ss_pred hhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHH
Q 009766 191 RKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYH 227 (526)
Q Consensus 191 ~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~ 227 (526)
.++++++.+.+++..+|++.....-.
T Consensus 150 -----------~~~~A~~~~~~al~~~p~~~~~~~~l 175 (281)
T 2c2l_A 150 -----------ERERELEECQRNHEGHEDDGHIRAQQ 175 (281)
T ss_dssp -----------HHHHHHTTTSGGGTTTSCHHHHTHHH
T ss_pred -----------HHHHHHHHHHhhhccccchhhhhhHH
Confidence 25788888888888888876554433
No 101
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.89 E-value=3.6e-08 Score=80.79 Aligned_cols=124 Identities=11% Similarity=0.021 Sum_probs=111.4
Q ss_pred HhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 009766 53 ETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKF 132 (526)
Q Consensus 53 ~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dka 132 (526)
..+|+...+|...+.+....+ .+++++.++++++..+|.+..+|..++.++...+ .+++++.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~~ 72 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVE------------NFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLG-NYAGAVQDCERA 72 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHcc------------CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhh-chHHHHHHHHHH
Confidence 345677788888888887775 4899999999999999999999999999998884 899999999999
Q ss_pred HHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhh
Q 009766 133 QKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLK 190 (526)
Q Consensus 133 LeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~ 190 (526)
++.+|.+..+|...+.+...++.+ +++++++.++++.+|.+..+|...+.++..++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~-~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 73 ICIDPAYSKAYGRMGLALSSLNKH-VEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred HhcCccCHHHHHHHHHHHHHhCCH-HHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 999999999999999999999998 489999999999999999999999888877653
No 102
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.88 E-value=9.9e-08 Score=78.12 Aligned_cols=116 Identities=15% Similarity=0.051 Sum_probs=103.2
Q ss_pred HHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChH
Q 009766 27 LQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG 106 (526)
Q Consensus 27 l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~ 106 (526)
+...-......|++ ++|+..+.+++..+|++..+|..++.++...+ .+++++.++++++..+|++..
T Consensus 15 ~~~~~~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~ 81 (131)
T 2vyi_A 15 LKTEGNEQMKVENF-EAAVHFYGKAIELNPANAVYFCNRAAAYSKLG------------NYAGAVQDCERAICIDPAYSK 81 (131)
T ss_dssp HHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHccCH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhh------------chHHHHHHHHHHHhcCccCHH
Confidence 33334445567888 89999999999999999999999999998876 489999999999999999999
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcC
Q 009766 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRS 156 (526)
Q Consensus 107 AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~ 156 (526)
+|...+.++...+ .+++++.+++++++.+|.+..+|...+.+...++.+
T Consensus 82 ~~~~~~~~~~~~~-~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 82 AYGRMGLALSSLN-KHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhC-CHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 9999999999885 899999999999999999999999999988877754
No 103
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.88 E-value=8.3e-08 Score=101.15 Aligned_cols=168 Identities=7% Similarity=-0.031 Sum_probs=141.6
Q ss_pred cCCCc------HHHHHHHHHHHH-hCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCCh-HHH
Q 009766 37 NHIYS------KEAVELSTKLLE-TNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSY-GAW 108 (526)
Q Consensus 37 ~geys------eEAL~lt~kaL~-iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy-~AW 108 (526)
.|++. ++|+..+++++. ++|++..+|.....+....+ .++++...+++++..+|+++ .+|
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~ 359 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRM------------KYEKVHSIYNRLLAIEDIDPTLVY 359 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHSSSSCHHHHH
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC------------CHHHHHHHHHHHhCccccCchHHH
Confidence 68883 389999999997 89999999999999988876 48999999999999999996 599
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHH-HHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHH
Q 009766 109 HHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVA-ASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSN 187 (526)
Q Consensus 109 ~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL-~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~ 187 (526)
...+.++.+.+ .++++.+.++++++..|.+++.|...+++. ...|.+ +++...++++++.+|.+..+|...+.++..
T Consensus 360 ~~~~~~~~~~~-~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~-~~A~~~~e~al~~~p~~~~~~~~~~~~~~~ 437 (530)
T 2ooe_A 360 IQYMKFARRAE-GIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDK-SVAFKIFELGLKKYGDIPEYVLAYIDYLSH 437 (530)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhc-CHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCCh-hHHHHHHHHHHHHCCCCHHHHHHHHHHHHh
Confidence 99988887664 789999999999999999888887766663 346666 589999999999999999999888887766
Q ss_pred hhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcc----cHH-HHHHH
Q 009766 188 LLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQS----GWF-YHLWL 230 (526)
Q Consensus 188 L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeS----aW~-Y~r~L 230 (526)
++. ++++...+.+++...|.+.. .|. |..+.
T Consensus 438 ~g~------------~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e 473 (530)
T 2ooe_A 438 LNE------------DNNTRVLFERVLTSGSLPPEKSGEIWARFLAFE 473 (530)
T ss_dssp TTC------------HHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHH
T ss_pred CCC------------HhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence 553 58899999999998877655 884 34443
No 104
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.87 E-value=1.7e-07 Score=80.90 Aligned_cols=133 Identities=8% Similarity=-0.032 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCC
Q 009766 59 YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSR 138 (526)
Q Consensus 59 ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDpr 138 (526)
..+|...+.+....+ .+++++..+++++..+|++..+|..++.++...+ .+++++.+++++++.+|.
T Consensus 13 ~~~~~~~a~~~~~~~------------~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~a~~~~~~ 79 (166)
T 1a17_A 13 AEELKTQANDYFKAK------------DYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE-CYGYALGDATRAIELDKK 79 (166)
T ss_dssp HHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcc------------CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCcc
Confidence 466777777777665 5899999999999999999999999999998885 899999999999999999
Q ss_pred ChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHH
Q 009766 139 NFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIF 215 (526)
Q Consensus 139 NyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~ 215 (526)
+..+|...+.+...+|.+. ++++++.+++..+|.+..+|.+.+.+...+.. ..++++++.+.++..
T Consensus 80 ~~~~~~~~a~~~~~~~~~~-~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~~~~ 145 (166)
T 1a17_A 80 YIKGYYRRAASNMALGKFR-AALRDYETVVKVKPHDKDAKMKYQECNKIVKQ----------KAFERAIAGDEHKRS 145 (166)
T ss_dssp CHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccHH-HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH----------HHHHHHHHcccchHH
Confidence 9999999999999999984 89999999999999999999766555332211 236777777776553
No 105
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.85 E-value=3.8e-08 Score=104.85 Aligned_cols=136 Identities=6% Similarity=-0.160 Sum_probs=124.9
Q ss_pred HHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHH
Q 009766 32 LHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHR 111 (526)
Q Consensus 32 ~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HR 111 (526)
......|+| ++|+..+.+++.++|++..+|+..+.++..++ .+++++.++++++..+|++..+|...
T Consensus 31 ~~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~l 97 (568)
T 2vsy_A 31 DAELGMGDT-TAGEMAVQRGLALHPGHPEAVARLGRVRWTQQ------------RHAEAAVLLQQASDAAPEHPGIALWL 97 (568)
T ss_dssp HHHHHHTCH-HHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 344567889 89999999999999999999999999998886 48999999999999999999999999
Q ss_pred HHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHh---CcChHHHHHHHHHHHHhccCChhHHHHHH
Q 009766 112 KWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASM---NRSEEDELKYTEDMICNNFSNYSAWHNRS 182 (526)
Q Consensus 112 rwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~L---g~~~eeELe~tdkaI~~nPsNySAW~yR~ 182 (526)
+.++...+ .+++++++++++++.+|.+..+|...+.+...+ +.+ +++++.+.++++.+|.+..+|+...
T Consensus 98 a~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~-~~A~~~~~~al~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 98 GHALEDAG-QAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRAL-DVLSAQVRAAVAQGVGAVEPFAFLS 169 (568)
T ss_dssp HHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTH-HHHHHHHHHHHHHTCCCSCHHHHTT
T ss_pred HHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccH-HHHHHHHHHHHhcCCcccChHHHhC
Confidence 99999885 899999999999999999999999999999999 776 5899999999999999999887554
No 106
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.85 E-value=9.4e-08 Score=79.17 Aligned_cols=110 Identities=13% Similarity=0.061 Sum_probs=98.9
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHH
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHH 110 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~H 110 (526)
-......|+| ++|+..+.+++..+|++..+|..++.++...+ .+++++.++++++..+|.+..+|..
T Consensus 23 ~~~~~~~~~~-~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~------------~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 23 GNECFQKGDY-PQAMKHYTEAIKRNPKDAKLYSNRAACYTKLL------------EFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp HHHHHHTTCS-HHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTT------------CHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHcCCH-HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhc------------cHHHHHHHHHHHHHhCCCchHHHHH
Confidence 3344578899 89999999999999999999999999987775 4899999999999999999999999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhC
Q 009766 111 RKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMN 154 (526)
Q Consensus 111 RrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg 154 (526)
.+.++...+ .+++++.+++++++.+|.+..+|...+.+....+
T Consensus 90 la~~~~~~~-~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 90 KAAALEAMK-DYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHTT-CHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHh-hHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhc
Confidence 999999885 8999999999999999999999998888776554
No 107
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.84 E-value=1.1e-07 Score=86.31 Aligned_cols=128 Identities=9% Similarity=-0.039 Sum_probs=114.6
Q ss_pred HHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHH
Q 009766 31 FLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHH 110 (526)
Q Consensus 31 ~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~H 110 (526)
-......|+| ++|+..+.+++ +| +..+|+.++.++..++ .+++++..+++++..+|++..+|..
T Consensus 13 g~~~~~~~~~-~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~~~ 76 (213)
T 1hh8_A 13 GVLAADKKDW-KGALDAFSAVQ--DP-HSRICFNIGCMYTILK------------NMTEAEKAFTRSINRDKHLAVAYFQ 76 (213)
T ss_dssp HHHHHHTTCH-HHHHHHHHTSS--SC-CHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHhCCH-HHHHHHHHHHc--CC-ChHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCccchHHHHH
Confidence 3345578899 89999999996 44 7789999999998886 4899999999999999999999999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHhCCCCh----------------hhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCC
Q 009766 111 RKWILSKGHSSIDNELRLLDKFQKADSRNF----------------HAWNYRRFVAASMNRSEEDELKYTEDMICNNFSN 174 (526)
Q Consensus 111 RrwvL~kl~~~~eeELe~~dkaLeiDprNy----------------hAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsN 174 (526)
++.++...+ .++++++.++++++.+|.|. .+|.+++.+...+|.+ ++++++++++++.+|.+
T Consensus 77 lg~~~~~~~-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 77 RGMLYYQTE-KYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEW-KKAEEQLALATSMKSEP 154 (213)
T ss_dssp HHHHHHHTT-CHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHTTCCSG
T ss_pred HHHHHHHcc-cHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCH-HHHHHHHHHHHHcCccc
Confidence 999999885 99999999999999998887 9999999999999998 48999999999999987
Q ss_pred hh
Q 009766 175 YS 176 (526)
Q Consensus 175 yS 176 (526)
..
T Consensus 155 ~~ 156 (213)
T 1hh8_A 155 RH 156 (213)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 108
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.83 E-value=1.4e-07 Score=85.65 Aligned_cols=135 Identities=7% Similarity=-0.016 Sum_probs=118.5
Q ss_pred HHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCCh
Q 009766 61 AWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNF 140 (526)
Q Consensus 61 AWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNy 140 (526)
.++.++.++...+ .+++++..+++++ +| +..+|..++.++...+ .+++++++++++++.+|.+.
T Consensus 8 ~~~~~g~~~~~~~------------~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~~~~~ 71 (213)
T 1hh8_A 8 SLWNEGVLAADKK------------DWKGALDAFSAVQ--DP-HSRICFNIGCMYTILK-NMTEAEKAFTRSINRDKHLA 71 (213)
T ss_dssp HHHHHHHHHHHTT------------CHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhC------------CHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCccch
Confidence 3455666666654 5899999999996 34 7889999999999885 89999999999999999999
Q ss_pred hhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCCh----------------hHHHHHHHHHHHhhhhhccCccchhhhHH
Q 009766 141 HAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY----------------SAWHNRSLLLSNLLKRKVEGFVSKEKVLP 204 (526)
Q Consensus 141 hAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNy----------------SAW~yR~~LL~~L~~~~~~g~~~~~eile 204 (526)
.+|..++.+...++.+. +++++++++++.+|.|. .+|++++.++..++. ++
T Consensus 72 ~~~~~lg~~~~~~~~~~-~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~------------~~ 138 (213)
T 1hh8_A 72 VAYFQRGMLYYQTEKYD-LAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEE------------WK 138 (213)
T ss_dssp HHHHHHHHHHHHTTCHH-HHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTC------------HH
T ss_pred HHHHHHHHHHHHcccHH-HHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccC------------HH
Confidence 99999999999999984 89999999999988887 999999999988765 79
Q ss_pred HHHHHHHHHHHhCCCCcccH
Q 009766 205 DEYEFVHQAIFTDPDDQSGW 224 (526)
Q Consensus 205 eELe~v~~AI~~dP~DeSaW 224 (526)
++++.+.+++..+|++....
T Consensus 139 ~A~~~~~~al~~~p~~~~~~ 158 (213)
T 1hh8_A 139 KAEEQLALATSMKSEPRHSK 158 (213)
T ss_dssp HHHHHHHHHHTTCCSGGGGH
T ss_pred HHHHHHHHHHHcCcccccch
Confidence 99999999999999987654
No 109
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.83 E-value=1.6e-07 Score=87.94 Aligned_cols=165 Identities=7% Similarity=-0.058 Sum_probs=124.5
Q ss_pred cHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 009766 58 LYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSY---GAWHHRKWILSKGHSSIDNELRLLDKFQK 134 (526)
Q Consensus 58 ~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy---~AW~HRrwvL~kl~~~~eeELe~~dkaLe 134 (526)
...++..++..+...+ .+++++..+++++..+|.+. .+|..++.++...+ .++++++.++++++
T Consensus 3 ~~~~~~~~a~~~~~~g------------~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~-~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDG------------NWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNA-DLPLAQAAIDRFIR 69 (225)
T ss_dssp CHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHH
Confidence 3567777888777775 58999999999999999874 68999999999885 99999999999999
Q ss_pred hCCCChh---hhhHHHHHHHHh------------------CcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhh-
Q 009766 135 ADSRNFH---AWNYRRFVAASM------------------NRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRK- 192 (526)
Q Consensus 135 iDprNyh---AW~yRr~lL~~L------------------g~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~- 192 (526)
.+|++.. ||.+++.+...+ +.+ +++++.++++|+.+|.+..+|.-+..+........
T Consensus 70 ~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~ 148 (225)
T 2yhc_A 70 LNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQA-RAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAK 148 (225)
T ss_dssp HCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHH-HHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred HCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHH-HHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHH
Confidence 9999986 888898887653 233 58999999999999999988854332211110000
Q ss_pred ---ccC-ccchhhhHHHHHHHHHHHHHhCCCCc---ccHHHHHHHHccccC
Q 009766 193 ---VEG-FVSKEKVLPDEYEFVHQAIFTDPDDQ---SGWFYHLWLLDQTVR 236 (526)
Q Consensus 193 ---~~g-~~~~~eileeELe~v~~AI~~dP~De---SaW~Y~r~LL~~~~~ 236 (526)
..+ .-...+.+.+++..+++++..+|++. .+|+++..++.++..
T Consensus 149 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~ 199 (225)
T 2yhc_A 149 YEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQM 199 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCC
Confidence 000 00112347999999999999999986 568777777766544
No 110
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.82 E-value=1e-07 Score=80.53 Aligned_cols=120 Identities=8% Similarity=-0.063 Sum_probs=105.0
Q ss_pred HhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 009766 53 ETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKF 132 (526)
Q Consensus 53 ~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dka 132 (526)
..+|....+|...+.++...+ .+++++.++++++..+|.+..+|..++.++...+ .+++++..++++
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~------------~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~-~~~~A~~~~~~a 69 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGR------------KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ-QPEQALADCRRA 69 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhC------------cHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 467889999999999998886 4899999999999999999999999999999885 899999999999
Q ss_pred HHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccC-----ChhHHHHHHHHHH
Q 009766 133 QKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFS-----NYSAWHNRSLLLS 186 (526)
Q Consensus 133 LeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPs-----NySAW~yR~~LL~ 186 (526)
++++|.+..+|...+.++..++.+ +++++++.++++.+|. +...+.....+..
T Consensus 70 l~~~p~~~~~~~~l~~~~~~~~~~-~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~ 127 (137)
T 3q49_B 70 LELDGQSVKAHFFLGQCQLEMESY-DEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 127 (137)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHH
T ss_pred HHhCchhHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 4899999999999998 5555555444433
No 111
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.82 E-value=4.2e-08 Score=103.25 Aligned_cols=118 Identities=10% Similarity=-0.021 Sum_probs=101.8
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHH
Q 009766 29 SQFLHNHHNHIYSKEAVELSTKLLETNPEL---------------YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRV 93 (526)
Q Consensus 29 ~~~~~~~~~geyseEAL~lt~kaL~iNPd~---------------ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~ 93 (526)
..-......|+| ++|+..+.++|.++|++ ..+|+.++.++.+++ .+++++..
T Consensus 273 ~~G~~~~~~g~~-~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g------------~~~~A~~~ 339 (457)
T 1kt0_A 273 EKGTVYFKGGKY-MQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLR------------EYTKAVEC 339 (457)
T ss_dssp HHHHHHHHTTCH-HHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTT------------CHHHHHHH
T ss_pred HHHHHHHhCCCH-HHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhc------------CHHHHHHH
Confidence 333444568899 89999999999999999 799999999999987 48999999
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHH
Q 009766 94 VESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDE 160 (526)
Q Consensus 94 ~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeE 160 (526)
++++|.++|++..+|+.|+.++..++ .+++++..++++++++|.|..+|..++.+...++.+.+.+
T Consensus 340 ~~~al~~~p~~~~a~~~~g~a~~~~g-~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~ 405 (457)
T 1kt0_A 340 CDKALGLDSANEKGLYRRGEAQLLMN-EFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERD 405 (457)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999985 9999999999999999999999999999998887764333
No 112
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.81 E-value=5.9e-08 Score=85.76 Aligned_cols=97 Identities=12% Similarity=0.017 Sum_probs=60.4
Q ss_pred HHHHHhhcCCCcHHHHHHHHHHHHh------------------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHH
Q 009766 30 QFLHNHHNHIYSKEAVELSTKLLET------------------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEEL 91 (526)
Q Consensus 30 ~~~~~~~~geyseEAL~lt~kaL~i------------------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL 91 (526)
.-......|.| ++|+..+.++|.+ +|.+..+|..++.++..++ .+.+++
T Consensus 17 ~G~~~~~~~~~-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~------------~~~~A~ 83 (162)
T 3rkv_A 17 KGNELFVQKDY-KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIG------------DLHEAE 83 (162)
T ss_dssp HHHHHHHTTCH-HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHT------------CHHHHH
T ss_pred HHHHHHHcCCH-HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC------------cHHHHH
Confidence 33344567999 8999999999998 5555555555555555554 255555
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCCh
Q 009766 92 RVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNF 140 (526)
Q Consensus 92 ~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNy 140 (526)
..++++|..+|.+..+|+.++.++..++ .+++++..+.++++++|.|.
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g-~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAW-KLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHh-cHHHHHHHHHHHHhcCCCCH
Confidence 5555555555555555555555555553 55555555555555555554
No 113
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.80 E-value=7e-08 Score=85.27 Aligned_cols=119 Identities=8% Similarity=-0.026 Sum_probs=104.4
Q ss_pred cHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh------------------CCCChHHHHHHHHHHHhCC
Q 009766 58 LYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ------------------NFKSYGAWHHRKWILSKGH 119 (526)
Q Consensus 58 ~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~------------------NPKsy~AW~HRrwvL~kl~ 119 (526)
...+|..++..+...+ .+.+++..++++|.. +|.+..+|..++.++.+++
T Consensus 10 ~a~~~~~~G~~~~~~~------------~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~ 77 (162)
T 3rkv_A 10 SVEALRQKGNELFVQK------------DYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIG 77 (162)
T ss_dssp HHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3467788888887775 589999999999999 8888999999999999885
Q ss_pred CChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCCh-hHHHHHHHHHHHhhh
Q 009766 120 SSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY-SAWHNRSLLLSNLLK 190 (526)
Q Consensus 120 ~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNy-SAW~yR~~LL~~L~~ 190 (526)
.+++++..|+++++++|.|..+|..++.++..+|.+. ++++++.+++..+|+|. .++.....+...+..
T Consensus 78 -~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~-~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 78 -DLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLD-EAEEDLKLLLRNHPAAASVVAREMKIVTERRAE 147 (162)
T ss_dssp -CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHH-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999994 89999999999999998 556666666665543
No 114
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.80 E-value=5.5e-08 Score=82.14 Aligned_cols=120 Identities=8% Similarity=-0.092 Sum_probs=105.8
Q ss_pred HhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHH
Q 009766 99 RQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAW 178 (526)
Q Consensus 99 ~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW 178 (526)
..+|.+..+|...+.++...+ .+++++.++.++++.+|.+..+|..++.++..++.+. ++++++.+++..+|.+..+|
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~-~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGR-KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPE-QALADCRRALELDGQSVKAH 80 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHhCchhHHHH
Confidence 357889999999999998885 8999999999999999999999999999999999984 89999999999999999999
Q ss_pred HHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCC-----CcccHHHHHHHHc
Q 009766 179 HNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPD-----DQSGWFYHLWLLD 232 (526)
Q Consensus 179 ~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~-----DeSaW~Y~r~LL~ 232 (526)
+.++.++..++. ++++++.+.+++..+|+ +...+...+.+..
T Consensus 81 ~~l~~~~~~~~~------------~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~ 127 (137)
T 3q49_B 81 FFLGQCQLEMES------------YDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 127 (137)
T ss_dssp HHHHHHHHHTTC------------HHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh------------HHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHH
Confidence 999999988875 79999999999999999 6667766555443
No 115
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=1.4e-07 Score=79.87 Aligned_cols=121 Identities=12% Similarity=-0.022 Sum_probs=107.5
Q ss_pred HhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCC---hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCCh
Q 009766 99 RQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRN---FHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175 (526)
Q Consensus 99 ~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprN---yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNy 175 (526)
..+|++..+|..++......+ .+++++++++++++.+|.+ ..+|..++.+...++.+ +++++++++++..+|.+.
T Consensus 22 ~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~A~~~~~~~~~~~~~~~ 99 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFKCG-DYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDY-DKAETEASKAIEKDGGDV 99 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHTTT-CHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHTSCCH
T ss_pred ccchHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccH-HHHHHHHHHHHhhCccCH
Confidence 357889999999998888774 8999999999999999988 89999999999999988 489999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 176 SAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 176 SAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
.+|..++.++..++. +++++.++.+++..+|++..+|.....+..+
T Consensus 100 ~~~~~~a~~~~~~~~------------~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 100 KALYRRSQALEKLGR------------LDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHHHHHHHTC------------HHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCC------------HHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 999999999988765 7999999999999999999999766655543
No 116
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.77 E-value=9.8e-08 Score=90.16 Aligned_cols=177 Identities=12% Similarity=0.085 Sum_probs=140.9
Q ss_pred HHHHHHHhhcCCCcHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHH
Q 009766 28 QSQFLHNHHNHIYSKEAVELSTKLLET--------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALR 99 (526)
Q Consensus 28 ~~~~~~~~~~geyseEAL~lt~kaL~i--------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~ 99 (526)
...-......|++ ++|+.++.+++.+ +|....+|+..+.++...+ .+++++.++++++.
T Consensus 31 ~~l~~~~~~~g~~-~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g------------~~~~A~~~~~~al~ 97 (311)
T 3nf1_A 31 HNLVIQYASQGRY-EVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQN------------KYKDAANLLNDALA 97 (311)
T ss_dssp HHHHHHHHHTTCH-HHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHH
Confidence 3333444567888 8999999999995 7888899999999988886 47899999999997
Q ss_pred h--------CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhC--------CCChhhhhHHHHHHHHhCcChHHHHHH
Q 009766 100 Q--------NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKAD--------SRNFHAWNYRRFVAASMNRSEEDELKY 163 (526)
Q Consensus 100 ~--------NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiD--------prNyhAW~yRr~lL~~Lg~~~eeELe~ 163 (526)
. +|....+|...+.++...+ .+++++.++.+++++. |....+|...+.+....+.+ ++++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~~A~~~ 175 (311)
T 3nf1_A 98 IREKTLGKDHPAVAATLNNLAVLYGKRG-KYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKY-EEVEYY 175 (311)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCH-HHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCH-HHHHHH
Confidence 6 5777889999999998874 8999999999999874 66778889999999888988 489999
Q ss_pred HHHHHHh--------ccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHh---------CCCCcccHHH
Q 009766 164 TEDMICN--------NFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFT---------DPDDQSGWFY 226 (526)
Q Consensus 164 tdkaI~~--------nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~---------dP~DeSaW~Y 226 (526)
+.+++.. +|....+|...+.++..+++ ++++++++.+++.. +|.....|..
T Consensus 176 ~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 243 (311)
T 3nf1_A 176 YQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGK------------FKQAETLYKEILTRAHEREFGSVDDENKPIWMH 243 (311)
T ss_dssp HHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTC------------HHHHHHHHHHHHHHHHHHHHC------CCHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHH
Confidence 9999998 78888889999998887765 67888888888853 4445555544
Q ss_pred HHHHH
Q 009766 227 HLWLL 231 (526)
Q Consensus 227 ~r~LL 231 (526)
...+.
T Consensus 244 ~~~~~ 248 (311)
T 3nf1_A 244 AEERE 248 (311)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 117
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.76 E-value=2.6e-07 Score=74.44 Aligned_cols=99 Identities=9% Similarity=-0.018 Sum_probs=60.0
Q ss_pred hhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 009766 35 HHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWI 114 (526)
Q Consensus 35 ~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwv 114 (526)
...|++ ++|+..+.+++..+|++..+|...+.+....+ .+++++..+++++..+|++..+|...+.+
T Consensus 15 ~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 15 LSVGNI-DDALQCYSEAIKLDPHNHVLYSNRSAAYAKKG------------DYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHcccH-HHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhc------------cHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 345555 56666666666666666666666666655554 35666666666666666666666666666
Q ss_pred HHhCCCChHHHHHHHHHHHHhCCCChhhhhHHH
Q 009766 115 LSKGHSSIDNELRLLDKFQKADSRNFHAWNYRR 147 (526)
Q Consensus 115 L~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr 147 (526)
+...+ .+++++..+.++++.+|.+..+|...+
T Consensus 82 ~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~l~ 113 (118)
T 1elw_A 82 LEFLN-RFEEAKRTYEEGLKHEANNPQLKEGLQ 113 (118)
T ss_dssp HHHTT-CHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred HHHHh-hHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 65553 566666666666666666655555443
No 118
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.75 E-value=3.8e-08 Score=99.42 Aligned_cols=133 Identities=11% Similarity=-0.048 Sum_probs=76.6
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHHHhCCCcH-----------------HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHH
Q 009766 29 SQFLHNHHNHIYSKEAVELSTKLLETNPELY-----------------TAWNYRKLAVQHKLTENDSDPDSLKSILDEEL 91 (526)
Q Consensus 29 ~~~~~~~~~geyseEAL~lt~kaL~iNPd~y-----------------tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL 91 (526)
..-......|+| ++|+..+.++|.++|++. .+|+.++.++..++ .+++++
T Consensus 184 ~~g~~~~~~g~~-~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g------------~~~~A~ 250 (338)
T 2if4_A 184 MDGNSLFKEEKL-EEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLK------------RYDEAI 250 (338)
T ss_dssp HHHHHTCSSSCC-HHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTT------------CCHHHH
T ss_pred HHHHHHHhcCCH-HHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcC------------CHHHHH
Confidence 334455578999 899999999999999987 38888888887776 368888
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhc
Q 009766 92 RVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNN 171 (526)
Q Consensus 92 ~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~n 171 (526)
..++++|..+|++..+|+.++.++..++ .+++++..++++++++|.|..+|.....+........+++.+.+.+++..+
T Consensus 251 ~~~~~al~~~p~~~~a~~~lg~a~~~~g-~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~ 329 (338)
T 2if4_A 251 GHCNIVLTEEEKNPKALFRRGKAKAELG-QMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGK 329 (338)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHTTT-CHHHHHHHHHHTTC-------------------------------------
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 8888888888888888888888888774 888888888888888888888888877775555444456667778888877
Q ss_pred cCCh
Q 009766 172 FSNY 175 (526)
Q Consensus 172 PsNy 175 (526)
|.+.
T Consensus 330 p~~~ 333 (338)
T 2if4_A 330 DEGG 333 (338)
T ss_dssp ----
T ss_pred CCCC
Confidence 7663
No 119
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.75 E-value=2.6e-07 Score=74.45 Aligned_cols=114 Identities=10% Similarity=-0.018 Sum_probs=102.0
Q ss_pred cHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Q 009766 58 LYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADS 137 (526)
Q Consensus 58 ~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDp 137 (526)
...+|...+.+....+ .+++++.++++++..+|.+..+|..++.++...+ .+++++..++++++.+|
T Consensus 3 ~~~~~~~~~~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~~~~~~~ 69 (118)
T 1elw_A 3 QVNELKEKGNKALSVG------------NIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKG-DYQKAYEDGCKTVDLKP 69 (118)
T ss_dssp HHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHcc------------cHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHhCc
Confidence 3567778888777765 5899999999999999999999999999998874 89999999999999999
Q ss_pred CChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHH
Q 009766 138 RNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLL 185 (526)
Q Consensus 138 rNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL 185 (526)
.+..+|...+.+...++.+ +++++++.++++.+|.+..+|...+.+.
T Consensus 70 ~~~~~~~~~a~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 70 DWGKGYSRKAAALEFLNRF-EEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp TCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 9999999999999999998 4899999999999999999988776653
No 120
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.75 E-value=3.7e-08 Score=89.93 Aligned_cols=126 Identities=13% Similarity=-0.012 Sum_probs=100.5
Q ss_pred HHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCCh----------------HHHHHHHHH
Q 009766 51 LLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSY----------------GAWHHRKWI 114 (526)
Q Consensus 51 aL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy----------------~AW~HRrwv 114 (526)
.....++...+|..++.++...+ .+.+++.++++++..+|++. .+|..++.+
T Consensus 30 ~~~~~~~~~~~~~~~g~~~~~~~------------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 97 (198)
T 2fbn_A 30 TDEEKVQSAFDIKEEGNEFFKKN------------EINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATC 97 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 33344444455555555555443 35666666666666666655 889999999
Q ss_pred HHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhh
Q 009766 115 LSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLK 190 (526)
Q Consensus 115 L~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~ 190 (526)
+...+ .+++++.+++++++++|.+..+|..++.++..++.+. ++++++.++++.+|.+..++...+.+...++.
T Consensus 98 ~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~-~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 171 (198)
T 2fbn_A 98 YNKNK-DYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLE-EAKENLYKAASLNPNNLDIRNSYELCVNKLKE 171 (198)
T ss_dssp HHHTT-CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHH-HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhc-CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHH-HHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 98885 8999999999999999999999999999999999984 89999999999999999999999998887765
No 121
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.74 E-value=6.8e-08 Score=77.38 Aligned_cols=108 Identities=11% Similarity=0.077 Sum_probs=98.0
Q ss_pred hCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccC--ChhH
Q 009766 100 QNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFS--NYSA 177 (526)
Q Consensus 100 ~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPs--NySA 177 (526)
.+|.+..+|...+.++...+ .+++++.+++++++.+|.+..+|..++.+...++.+ ++++++++++++.+|. +..+
T Consensus 1 l~p~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~ 78 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAG-NYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERY-EEAVDCYNYVINVIEDEYNKDV 78 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSC-CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHTSCCTTCHHH
T ss_pred CCCCcHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCH-HHHHHHHHHHHHhCcccchHHH
Confidence 37899999999999998774 899999999999999999999999999999999998 4899999999999999 9999
Q ss_pred HHHHHHHHHHh-hhhhccCccchhhhHHHHHHHHHHHHHhCCCCc
Q 009766 178 WHNRSLLLSNL-LKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQ 221 (526)
Q Consensus 178 W~yR~~LL~~L-~~~~~~g~~~~~eileeELe~v~~AI~~dP~De 221 (526)
|..++.++..+ +. ++++++++.+++..+|.+.
T Consensus 79 ~~~l~~~~~~~~~~------------~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 79 WAAKADALRYIEGK------------EVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHHHHTTCSSC------------SHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHHHHHHhCC------------HHHHHHHHHHHhhcccCCC
Confidence 99999998877 65 5899999999999999875
No 122
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.74 E-value=2.7e-08 Score=105.66 Aligned_cols=132 Identities=14% Similarity=0.042 Sum_probs=112.2
Q ss_pred hhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q 009766 35 HHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWI 114 (526)
Q Consensus 35 ~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwv 114 (526)
...|+| ++|+..+.++|.++|++..+|+.++.++..++ .+++++..++++++.+|++..+|+.++.+
T Consensus 17 ~~~g~~-~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g------------~~~~A~~~~~~al~l~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 17 FKAKDY-ENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE------------CYGYALGDATRAIELDKKYIKGYYRRAAS 83 (477)
T ss_dssp TTTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred HHhCCH-HHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc------------CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 456888 89999999999999999999999999999887 48999999999999999999999999999
Q ss_pred HHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHH--HHHhCcChHHHHHHHH-----------HHHHhccCChhHHHHH
Q 009766 115 LSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFV--AASMNRSEEDELKYTE-----------DMICNNFSNYSAWHNR 181 (526)
Q Consensus 115 L~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~l--L~~Lg~~~eeELe~td-----------kaI~~nPsNySAW~yR 181 (526)
+..++ .++++++.++++++++|.+..+|.+.+.+ +...+.+. ++++.++ +++..+|+...+++..
T Consensus 84 ~~~~g-~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~-~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 161 (477)
T 1wao_1 84 NMALG-KFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFE-RAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLED 161 (477)
T ss_dssp HHHHT-CHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHC-CC------CCSTTTCCTTSSCCCCTTCCSCCCGG
T ss_pred HHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH-HHhccccccchhHhhhhhhhcccccccccccccc
Confidence 99885 89999999999999999999999999888 55556664 6777888 8888888776665543
No 123
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.74 E-value=6.4e-08 Score=77.53 Aligned_cols=108 Identities=6% Similarity=0.013 Sum_probs=99.8
Q ss_pred hCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 009766 54 TNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQ 133 (526)
Q Consensus 54 iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaL 133 (526)
++|++..+|...+.+....+ .+++++.++++++..+|.+..+|..++.++...+ .++++++++++++
T Consensus 1 l~p~~~~~~~~~~~~~~~~~------------~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~a~ 67 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAG------------NYTESIDLFEKAIQLDPEESKYWLMKGKALYNLE-RYEEAVDCYNYVI 67 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSC------------CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHhh------------hHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHH
Confidence 47899999999999988776 4899999999999999999999999999998885 8999999999999
Q ss_pred HhCCC--ChhhhhHHHHHHHHh-CcChHHHHHHHHHHHHhccCCh
Q 009766 134 KADSR--NFHAWNYRRFVAASM-NRSEEDELKYTEDMICNNFSNY 175 (526)
Q Consensus 134 eiDpr--NyhAW~yRr~lL~~L-g~~~eeELe~tdkaI~~nPsNy 175 (526)
+.+|. +..+|...+.+...+ +.+ +++++++.+++..+|++.
T Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~-~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 68 NVIEDEYNKDVWAAKADALRYIEGKE-VEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HTSCCTTCHHHHHHHHHHHTTCSSCS-HHHHHHHHHHGGGCCCCC
T ss_pred HhCcccchHHHHHHHHHHHHHHhCCH-HHHHHHHHHHhhcccCCC
Confidence 99999 999999999999999 999 489999999999999864
No 124
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.74 E-value=1.7e-07 Score=88.52 Aligned_cols=160 Identities=10% Similarity=0.039 Sum_probs=132.4
Q ss_pred HHhhcCCCcHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhC---
Q 009766 33 HNHHNHIYSKEAVELSTKLLET--------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQN--- 101 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~i--------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~N--- 101 (526)
.....|++ ++|+..+.+++.+ +|....+|+..+.++...+ .+++++.++++++...
T Consensus 78 ~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~a~~~~~~~ 144 (311)
T 3nf1_A 78 VYRDQNKY-KDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRG------------KYKEAEPLCKRALEIREKV 144 (311)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTT------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCH-HHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcC------------cHHHHHHHHHHHHHHHHHh
Confidence 33456888 8999999999988 5777889999999888876 4889999999999773
Q ss_pred -----CCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh--------CCCChhhhhHHHHHHHHhCcChHHHHHHHHHHH
Q 009766 102 -----FKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA--------DSRNFHAWNYRRFVAASMNRSEEDELKYTEDMI 168 (526)
Q Consensus 102 -----PKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei--------DprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI 168 (526)
|....+|...+.++...+ .++++++++++++++ +|....+|...+.+....|.+. ++++++++++
T Consensus 145 ~~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~al 222 (311)
T 3nf1_A 145 LGKDHPDVAKQLNNLALLCQNQG-KYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFK-QAETLYKEIL 222 (311)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHH-HHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHH
Confidence 777888999999988874 899999999999998 7888889999999999999984 7999999999
Q ss_pred Hh-------------------------------------------------ccCChhHHHHHHHHHHHhhhhhccCccch
Q 009766 169 CN-------------------------------------------------NFSNYSAWHNRSLLLSNLLKRKVEGFVSK 199 (526)
Q Consensus 169 ~~-------------------------------------------------nPsNySAW~yR~~LL~~L~~~~~~g~~~~ 199 (526)
.. +|.+..+|...+.++...++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~--------- 293 (311)
T 3nf1_A 223 TRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGK--------- 293 (311)
T ss_dssp HHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTC---------
T ss_pred HHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCC---------
Confidence 74 35555666677766666554
Q ss_pred hhhHHHHHHHHHHHHHhCCC
Q 009766 200 EKVLPDEYEFVHQAIFTDPD 219 (526)
Q Consensus 200 ~eileeELe~v~~AI~~dP~ 219 (526)
++++++++.+++.+.|+
T Consensus 294 ---~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 294 ---FEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp ---HHHHHHHHHHHHHHHC-
T ss_pred ---HHHHHHHHHHHHHHhhc
Confidence 69999999999998876
No 125
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.74 E-value=1.2e-07 Score=94.32 Aligned_cols=183 Identities=7% Similarity=-0.147 Sum_probs=148.2
Q ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcH----HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh
Q 009766 25 RVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELY----TAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100 (526)
Q Consensus 25 r~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~y----tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~ 100 (526)
..+...-......|+| ++|+..+.++|.++|++. .+|+..+.++...+ .+++++.++++++..
T Consensus 49 ~~l~~~g~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g------------~~~~A~~~~~~al~~ 115 (411)
T 4a1s_A 49 LELALEGERLCNAGDC-RAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLG------------DYNKAMQYHKHDLTL 115 (411)
T ss_dssp HHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcH-HHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHH
Confidence 3344444455678999 899999999999999987 58888999888876 489999999999987
Q ss_pred ------CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh------CCCChhhhhHHHHHHHHhCc-------------
Q 009766 101 ------NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA------DSRNFHAWNYRRFVAASMNR------------- 155 (526)
Q Consensus 101 ------NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei------DprNyhAW~yRr~lL~~Lg~------------- 155 (526)
+|....+|...+.++...+ .+++++.++++++++ ++....+|...+.+....+.
T Consensus 116 ~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~ 194 (411)
T 4a1s_A 116 AKSMNDRLGEAKSSGNLGNTLKVMG-RFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDD 194 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHH
T ss_pred HHHccCchHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhh
Confidence 6888899999999999885 899999999999998 67777899999999999888
Q ss_pred ----ChHHHHHHHHHHHHhc------cCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcc---
Q 009766 156 ----SEEDELKYTEDMICNN------FSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQS--- 222 (526)
Q Consensus 156 ----~~eeELe~tdkaI~~n------PsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeS--- 222 (526)
+ +++++++.+++... +....+|...+.++...++ ++++++++.+++...|....
T Consensus 195 a~~~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~------------~~~A~~~~~~al~~~~~~~~~~~ 261 (411)
T 4a1s_A 195 VKEAL-TRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGD------------FQAAIEHHQERLRIAREFGDRAA 261 (411)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHHHHTCHHH
T ss_pred hhHHH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC------------hHHHHHHHHHHHHHHHhcCCcHH
Confidence 6 47888888888764 3334577777777776654 78999999999998887655
Q ss_pred ---cHHHHHHHHccc
Q 009766 223 ---GWFYHLWLLDQT 234 (526)
Q Consensus 223 ---aW~Y~r~LL~~~ 234 (526)
+|..+..++...
T Consensus 262 ~~~~~~~la~~~~~~ 276 (411)
T 4a1s_A 262 ERRANSNLGNSHIFL 276 (411)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHC
Confidence 666666666554
No 126
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=2.8e-07 Score=77.91 Aligned_cols=118 Identities=10% Similarity=-0.064 Sum_probs=106.8
Q ss_pred HhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHhCCCChHHHHHHH
Q 009766 53 ETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS---YGAWHHRKWILSKGHSSIDNELRLL 129 (526)
Q Consensus 53 ~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs---y~AW~HRrwvL~kl~~~~eeELe~~ 129 (526)
..+|+...+|+.++......+ .+.+++.++++++..+|.+ ..+|..++.++...+ .+++++..+
T Consensus 22 ~~~~~~~~~~~~~a~~~~~~~------------~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~ 88 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFKCG------------DYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLE-DYDKAETEA 88 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHTTT------------CHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTT-CHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHhC------------CHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHc-cHHHHHHHH
Confidence 357889999999999888776 5899999999999999998 999999999998885 899999999
Q ss_pred HHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHH
Q 009766 130 DKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLL 184 (526)
Q Consensus 130 dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~L 184 (526)
+++++.+|.+..+|..++.++..++.+ +++++++.++++.+|.+..+|.....+
T Consensus 89 ~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (148)
T 2dba_A 89 SKAIEKDGGDVKALYRRSQALEKLGRL-DQAVLDLQRCVSLEPKNKVFQEALRNI 142 (148)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHhhCccCHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 999999999999999999999999998 489999999999999999988765544
No 127
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.73 E-value=1.2e-07 Score=81.39 Aligned_cols=102 Identities=6% Similarity=0.008 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHH
Q 009766 106 GAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLL 185 (526)
Q Consensus 106 ~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL 185 (526)
..|..++.++.+.+ .+++++..++++++.+|.|..+|...+.++..+|.+ ++++++++++++.+|.+..+|..++.++
T Consensus 18 ~~~~~~g~~~~~~g-~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~-~~A~~~~~~al~l~P~~~~~~~~la~~~ 95 (121)
T 1hxi_A 18 ENPMEEGLSMLKLA-NLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKD-GLAIIALNHARMLDPKDIAVHAALAVSH 95 (121)
T ss_dssp SCHHHHHHHHHHTT-CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcC-CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 35777777777764 899999999999999999999999999999999998 4899999999999999999999999999
Q ss_pred HHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCc
Q 009766 186 SNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQ 221 (526)
Q Consensus 186 ~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~De 221 (526)
..+++ ++++++.+.+++..+|++.
T Consensus 96 ~~~g~------------~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 96 TNEHN------------ANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHH------------HHHHHHHHHHHHC------
T ss_pred HHcCC------------HHHHHHHHHHHHHhCcCCC
Confidence 88876 6999999999999999875
No 128
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.73 E-value=1.8e-07 Score=85.32 Aligned_cols=118 Identities=8% Similarity=-0.082 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcH----------------HHHHHHHHHHHhhhcCCCCCCchhhhhH
Q 009766 24 LRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELY----------------TAWNYRKLAVQHKLTENDSDPDSLKSIL 87 (526)
Q Consensus 24 ~r~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~y----------------tAWN~Rr~vL~~L~~~~~sdPe~~~~~~ 87 (526)
...+...-......|+| ++|+..+.++|.++|++. .+|..++.++..++ .+
T Consensus 38 ~~~~~~~g~~~~~~~~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~------------~~ 104 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEI-NEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNK------------DY 104 (198)
T ss_dssp HHHHHHHHHHHHHTTCH-HHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTT------------CH
T ss_pred HHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhc------------CH
Confidence 33444444555678999 899999999999999987 89999999998886 48
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCc
Q 009766 88 DEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNR 155 (526)
Q Consensus 88 ~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~ 155 (526)
++++.++++++..+|++..+|..++.++..++ .+++++.++.++++++|.+..+|...+.+...++.
T Consensus 105 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 171 (198)
T 2fbn_A 105 PKAIDHASKVLKIDKNNVKALYKLGVANMYFG-FLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKE 171 (198)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998885 89999999999999999999999988888776654
No 129
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.73 E-value=5.6e-07 Score=72.93 Aligned_cols=120 Identities=18% Similarity=0.148 Sum_probs=104.6
Q ss_pred hCCCc-HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 009766 54 TNPEL-YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKF 132 (526)
Q Consensus 54 iNPd~-ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dka 132 (526)
.+|.. ..+|...+.+....+ .+++++.++++++..+|.+..+|.....++...+ .+++++.+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~~ 69 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQG------------DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG-DYDEAIEYYQKA 69 (125)
T ss_dssp ----CHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhC-CHHHHHHHHHHH
Confidence 45655 778888888877775 4899999999999999999999999999998874 899999999999
Q ss_pred HHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHH
Q 009766 133 QKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSN 187 (526)
Q Consensus 133 LeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~ 187 (526)
++.+|.+..+|...+.+....+.+ +++++++++++..+|.+..++...+.+...
T Consensus 70 ~~~~~~~~~~~~~la~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 70 LELDPNNAEAWYNLGNAYYKQGDY-DEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhCCccHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 999999999999999999999988 489999999999999999999888777554
No 130
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.72 E-value=1.6e-07 Score=86.88 Aligned_cols=169 Identities=13% Similarity=0.071 Sum_probs=139.1
Q ss_pred cCCCcHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh--------
Q 009766 37 NHIYSKEAVELSTKLLET--------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ-------- 100 (526)
Q Consensus 37 ~geyseEAL~lt~kaL~i--------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~-------- 100 (526)
.|.+ ++|+.++.++|.+ +|....+|+..+.++...+ .+++++.++++++..
T Consensus 14 ~~~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~ 80 (283)
T 3edt_B 14 LVPR-GSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQN------------KYKEAAHLLNDALAIREKTLGKD 80 (283)
T ss_dssp CSCS-SSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHHTCTT
T ss_pred CCCH-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcc------------cHHHHHHHHHHHHHHHHHHcCCc
Confidence 3445 5677777777763 3778899999999998886 489999999999977
Q ss_pred CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh--------CCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHh--
Q 009766 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA--------DSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICN-- 170 (526)
Q Consensus 101 NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei--------DprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~-- 170 (526)
+|....+|...+.++...+ .++++++++.+++++ +|....+|...+.+...+|.+. ++++++.+++..
T Consensus 81 ~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~al~~~~ 158 (283)
T 3edt_B 81 HPAVAATLNNLAVLYGKRG-KYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAE-EVEYYYRRALEIYA 158 (283)
T ss_dssp CHHHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHH
Confidence 5778889999999998874 899999999999998 6888899999999999999984 899999999998
Q ss_pred ------ccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHh---------CCCCcccHHHHHHHHc
Q 009766 171 ------NFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFT---------DPDDQSGWFYHLWLLD 232 (526)
Q Consensus 171 ------nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~---------dP~DeSaW~Y~r~LL~ 232 (526)
+|.+..++...+.++...+. ++++++++.+++.. +|.....|.....+..
T Consensus 159 ~~~~~~~~~~~~~~~~la~~~~~~g~------------~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (283)
T 3edt_B 159 TRLGPDDPNVAKTKNNLASCYLKQGK------------YQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREE 223 (283)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHHTC------------HHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHh
Confidence 88888899999999888765 68888899888876 6666677755544443
No 131
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.72 E-value=6.5e-08 Score=94.56 Aligned_cols=174 Identities=7% Similarity=-0.075 Sum_probs=128.3
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHhh-hcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC-
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPEL------YTAWNYRKLAVQHK-LTENDSDPDSLKSILDEELRVVESALRQNFKS- 104 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~------ytAWN~Rr~vL~~L-~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs- 104 (526)
.....|+| ++|+..+.++|.+.|+. ..+|+..+.++... + .+++++.++++++.++|+.
T Consensus 86 ~~~~~g~~-~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg------------~~~~A~~~~~~Al~~~~~~~ 152 (292)
T 1qqe_A 86 CFKSGGNS-VNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLH------------DYAKAIDCYELAGEWYAQDQ 152 (292)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC------------CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhc------------CHHHHHHHHHHHHHHHHhCC
Confidence 33466888 89999999999998865 56888889888884 6 4899999999999998865
Q ss_pred -----hHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChh-------hhhHHHHHHHHhCcChHHHHHHHHHHHHhcc
Q 009766 105 -----YGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFH-------AWNYRRFVAASMNRSEEDELKYTEDMICNNF 172 (526)
Q Consensus 105 -----y~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyh-------AW~yRr~lL~~Lg~~~eeELe~tdkaI~~nP 172 (526)
..++...+.++...+ .+++++++++++++++|.+.. +|...+.+...+|.+ .+++.++++++..+|
T Consensus 153 ~~~~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~-~~A~~~~~~al~l~p 230 (292)
T 1qqe_A 153 SVALSNKCFIKCADLKALDG-QYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDA-VAAARTLQEGQSEDP 230 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCH-HHHHHHHHGGGCC--
T ss_pred ChHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHhhCC
Confidence 567888888888885 999999999999999998765 466678888888888 489999999999999
Q ss_pred CChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHH
Q 009766 173 SNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFY 226 (526)
Q Consensus 173 sNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y 226 (526)
+...+...+. +..+......+ ..+.+++++..+++++.++|.+...|.-
T Consensus 231 ~~~~~~~~~~--l~~l~~~~~~~---~~~~~~~A~~~~~~~~~l~~~~~~~~~~ 279 (292)
T 1qqe_A 231 NFADSRESNF--LKSLIDAVNEG---DSEQLSEHCKEFDNFMRLDKWKITILNK 279 (292)
T ss_dssp -------HHH--HHHHHHHHHTT---CTTTHHHHHHHHTTSSCCCHHHHHHHHH
T ss_pred CCCCcHHHHH--HHHHHHHHHcC---CHHHHHHHHHHhccCCccHHHHHHHHHH
Confidence 9887655432 22222111100 1234799999999999999977655543
No 132
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.71 E-value=7.6e-08 Score=82.65 Aligned_cols=85 Identities=9% Similarity=0.076 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHH
Q 009766 87 LDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTED 166 (526)
Q Consensus 87 ~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdk 166 (526)
+++++..+++++..+|++..+|...+.++...+ .+++++..++++++++|.+..+|...+.++..+|.+. ++++.+++
T Consensus 33 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g-~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~-~A~~~~~~ 110 (121)
T 1hxi_A 33 LAEAALAFEAVCQKEPEREEAWRSLGLTQAENE-KDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNAN-AALASLRA 110 (121)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-HHHHHHHH
Confidence 444444444444444444444444444444442 4444444444444444444444444444444444442 34444444
Q ss_pred HHHhccC
Q 009766 167 MICNNFS 173 (526)
Q Consensus 167 aI~~nPs 173 (526)
+++.+|.
T Consensus 111 al~~~P~ 117 (121)
T 1hxi_A 111 WLLSQPQ 117 (121)
T ss_dssp HHC----
T ss_pred HHHhCcC
Confidence 4444444
No 133
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.70 E-value=4.2e-07 Score=84.12 Aligned_cols=123 Identities=11% Similarity=0.063 Sum_probs=108.8
Q ss_pred HHhhcCCCcHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh----
Q 009766 33 HNHHNHIYSKEAVELSTKLLET--------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ---- 100 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~i--------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~---- 100 (526)
.....|+| ++|+..+.+++.+ +|....+|+..+.++...+ .+++++.++++++..
T Consensus 52 ~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 52 VYRDQNKY-KEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRG------------KYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTT------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcccH-HHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhc------------cHHHHHHHHHHHHHHHHHH
Confidence 44567888 8999999999988 5777889999999988876 489999999999987
Q ss_pred ----CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh--------CCCChhhhhHHHHHHHHhCcChHHHHHHHHHHH
Q 009766 101 ----NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA--------DSRNFHAWNYRRFVAASMNRSEEDELKYTEDMI 168 (526)
Q Consensus 101 ----NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei--------DprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI 168 (526)
+|....+|...+.++...+ .+++++.++++++++ +|.+..+|...+.+....|.+. ++++++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~~l 196 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQG-KAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQ-DAETLYKEIL 196 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHH-HHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHH
Confidence 6888999999999999885 899999999999999 8888899999999999999984 8999999999
Q ss_pred Hh
Q 009766 169 CN 170 (526)
Q Consensus 169 ~~ 170 (526)
..
T Consensus 197 ~~ 198 (283)
T 3edt_B 197 TR 198 (283)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 134
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.68 E-value=2.6e-06 Score=80.78 Aligned_cols=164 Identities=9% Similarity=-0.037 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHh----
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSK---- 117 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~k---- 117 (526)
++|+..+.+++..+ +..+|+..+.++..... +...+++++.++++++..+ +..+|...+.++..
T Consensus 59 ~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~--------~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~ 126 (273)
T 1ouv_A 59 KKAASFYAKACDLN--YSNGCHLLGNLYYSGQG--------VSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVV 126 (273)
T ss_dssp HHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSS--------SCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCC--------cccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCc
Confidence 44555555554443 44444444444443100 0013455555555555542 44555555555544
Q ss_pred CCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHH----hCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhc
Q 009766 118 GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAAS----MNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKV 193 (526)
Q Consensus 118 l~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~----Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~ 193 (526)
. ..+++++++++++++.+ +..++.+.+.++.. .+.+ ++++++++++++. .+..++...+.++..-.
T Consensus 127 ~-~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~-~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~---- 196 (273)
T 1ouv_A 127 T-RDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDL-KKALASYDKACDL--KDSPGCFNAGNMYHHGE---- 196 (273)
T ss_dssp C-CCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCH-HHHHHHHHHHHHT--TCHHHHHHHHHHHHHTC----
T ss_pred c-cCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHHC--CCHHHHHHHHHHHHcCC----
Confidence 2 24555555555555543 34455555554444 3333 3455555555544 23444554444444300
Q ss_pred cCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 194 EGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 194 ~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
....-++++++++.+++..+| ..+++.+..++..
T Consensus 197 ----~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~~~ 230 (273)
T 1ouv_A 197 ----GATKNFKEALARYSKACELEN--GGGCFNLGAMQYN 230 (273)
T ss_dssp ----SSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHT
T ss_pred ----CCCccHHHHHHHHHHHHhCCC--HHHHHHHHHHHHc
Confidence 001125666666666666654 4555555555544
No 135
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.67 E-value=1.7e-08 Score=101.93 Aligned_cols=144 Identities=10% Similarity=-0.018 Sum_probs=91.4
Q ss_pred HhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCCh-----------------HHHHHHHHHH
Q 009766 53 ETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSY-----------------GAWHHRKWIL 115 (526)
Q Consensus 53 ~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy-----------------~AW~HRrwvL 115 (526)
...++...+|+.++.++...+ .+.+++.++++++..+|.+. .+|+.++.++
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g------------~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~ 240 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEE------------KLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACL 240 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSS------------CCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcC------------CHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHH
Confidence 344556777888888776665 47999999999999999987 4999999999
Q ss_pred HhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccC
Q 009766 116 SKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEG 195 (526)
Q Consensus 116 ~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g 195 (526)
.+++ .+++++.+|+++++++|.|..+|..++.++..++.+. ++++++.++++.+|.|..++.....+......
T Consensus 241 ~~~g-~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~-~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~----- 313 (338)
T 2if4_A 241 IKLK-RYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMD-SARDDFRKAQKYAPDDKAIRRELRALAEQEKA----- 313 (338)
T ss_dssp HTTT-CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHH-HHHHHHHHTTC--------------------------
T ss_pred HHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-----
Confidence 9885 8999999999999999999999999999999999984 89999999999999999999887776544322
Q ss_pred ccchhhhHHHHHHHHHHHHHhCCCCc
Q 009766 196 FVSKEKVLPDEYEFVHQAIFTDPDDQ 221 (526)
Q Consensus 196 ~~~~~eileeELe~v~~AI~~dP~De 221 (526)
..+++...+.+++..+|++.
T Consensus 314 ------~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 314 ------LYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp --------------------------
T ss_pred ------HHHHHHHHHHHhhCCCCCCC
Confidence 24677788899999998875
No 136
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.67 E-value=2.4e-07 Score=90.92 Aligned_cols=175 Identities=9% Similarity=-0.079 Sum_probs=141.9
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcH----HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh------CC
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELY----TAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ------NF 102 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~y----tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~------NP 102 (526)
.....|.| ++|+..+.+++.++|++. .+|...+.+....+ .+++++.++++++.. .|
T Consensus 18 ~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~ 84 (406)
T 3sf4_A 18 RLCKSGDC-RAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLH------------DYAKALEYHHHDLTLARTIGDQL 84 (406)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHhccH-HHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhc------------CHHHHHHHHHHHHHHHHhccccH
Confidence 44567899 899999999999999984 67888888888776 489999999999876 45
Q ss_pred CChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCCh------hhhhHHHHHHHHhCc--------------------C
Q 009766 103 KSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNF------HAWNYRRFVAASMNR--------------------S 156 (526)
Q Consensus 103 Ksy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNy------hAW~yRr~lL~~Lg~--------------------~ 156 (526)
....+|...+.++...+ .+++++.++++++++.+++. .++...+.+....|. +
T Consensus 85 ~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~ 163 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLG-NFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDAL 163 (406)
T ss_dssp HHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHH
Confidence 66788999999998885 89999999999999987663 388899999888888 5
Q ss_pred hHHHHHHHHHHHHh------ccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcc------cH
Q 009766 157 EEDELKYTEDMICN------NFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQS------GW 224 (526)
Q Consensus 157 ~eeELe~tdkaI~~------nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeS------aW 224 (526)
+++++++.+++.. .+....+|...+.++..++. ++++++++.+++...|.... +|
T Consensus 164 -~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~------------~~~A~~~~~~al~~~~~~~~~~~~~~~~ 230 (406)
T 3sf4_A 164 -QAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGN------------FRDAVIAHEQRLLIAKEFGDKAAERRAY 230 (406)
T ss_dssp -HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTB------------HHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccC------------HHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 5788899988886 44455678888888777664 68999999999988877665 66
Q ss_pred HHHHHHHccc
Q 009766 225 FYHLWLLDQT 234 (526)
Q Consensus 225 ~Y~r~LL~~~ 234 (526)
.....++...
T Consensus 231 ~~la~~~~~~ 240 (406)
T 3sf4_A 231 SNLGNAYIFL 240 (406)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 6666666553
No 137
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.63 E-value=2.5e-07 Score=79.89 Aligned_cols=110 Identities=13% Similarity=0.046 Sum_probs=88.1
Q ss_pred hHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHH
Q 009766 105 YGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLL 184 (526)
Q Consensus 105 y~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~L 184 (526)
..+|...+.++.+.+ .|++++++|+++++++|.|..+|.+++.+...++.+. +++++++++|+++|.+..++..++.+
T Consensus 8 A~a~~~lG~~~~~~~-~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~-~A~~~~~~al~~~~~~~~~~~~~a~~ 85 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQK-DFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFA-ECVQFCEKAVEVGRETRADYKLIAKA 85 (127)
T ss_dssp HHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHH-HHHHHHHHHHHhCcccchhhHHHHHH
Confidence 345666777777774 8999999999999999999999999999999999984 89999999999999987766666555
Q ss_pred HHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCc
Q 009766 185 LSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQ 221 (526)
Q Consensus 185 L~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~De 221 (526)
+..++... .....++++++++.+++..+|+.+
T Consensus 86 ~~~lg~~~-----~~~~~~~~A~~~~~kal~~~~~~~ 117 (127)
T 4gcn_A 86 MSRAGNAF-----QKQNDLSLAVQWFHRSLSEFRDPE 117 (127)
T ss_dssp HHHHHHHH-----HHTTCHHHHHHHHHHHHHHSCCHH
T ss_pred HHHHHHHH-----HHcCCHHHHHHHHHHHHhhCcCHH
Confidence 55554311 011237999999999999998744
No 138
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.62 E-value=1.9e-07 Score=80.63 Aligned_cols=105 Identities=6% Similarity=-0.039 Sum_probs=89.0
Q ss_pred CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q 009766 56 PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA 135 (526)
Q Consensus 56 Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei 135 (526)
++...+|...|.++.+.+ .+++++.+++++|.++|++..+|..++.++..++ .++++++.+++++++
T Consensus 5 ~d~A~a~~~lG~~~~~~~------------~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~-~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQK------------DFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEK-KFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhh-hHHHHHHHHHHHHHh
Confidence 345667888888888776 5999999999999999999999999999999985 999999999999999
Q ss_pred CCCChh-------hhhHHHHHHHHhCcChHHHHHHHHHHHHhccCC
Q 009766 136 DSRNFH-------AWNYRRFVAASMNRSEEDELKYTEDMICNNFSN 174 (526)
Q Consensus 136 DprNyh-------AW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsN 174 (526)
+|.+.. ++...+.+...++.+ +++++++.+++..+|+.
T Consensus 72 ~~~~~~~~~~~a~~~~~lg~~~~~~~~~-~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 72 GRETRADYKLIAKAMSRAGNAFQKQNDL-SLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHSCCH
T ss_pred CcccchhhHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHhhCcCH
Confidence 998865 455556666666777 58999999999988853
No 139
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.62 E-value=2.2e-06 Score=69.32 Aligned_cols=108 Identities=21% Similarity=0.154 Sum_probs=96.4
Q ss_pred HHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHH
Q 009766 32 LHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHR 111 (526)
Q Consensus 32 ~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HR 111 (526)
......|++ ++|+..+.+++..+|++..+|+..+.++...+ .+++++.++++++..+|.+..+|...
T Consensus 17 ~~~~~~~~~-~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~l 83 (125)
T 1na0_A 17 NAYYKQGDY-DEAIEYYQKALELDPNNAEAWYNLGNAYYKQG------------DYDEAIEYYQKALELDPNNAEAWYNL 83 (125)
T ss_dssp HHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHcCCH-HHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhC------------CHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 344567888 89999999999999999999999999988876 48999999999999999999999999
Q ss_pred HHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHh
Q 009766 112 KWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASM 153 (526)
Q Consensus 112 rwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~L 153 (526)
..++...+ .+++++.+++++++.+|.+..++...+.+....
T Consensus 84 a~~~~~~~-~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 84 GNAYYKQG-DYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp HHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhc
Confidence 99998885 899999999999999999999988877766543
No 140
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.62 E-value=1.5e-07 Score=87.58 Aligned_cols=97 Identities=11% Similarity=-0.002 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCC--
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGH-- 119 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~-- 119 (526)
++|+..+.+++.+||++..+|+..+.++..+++... .......+++++.+++++|+++|++..+|+..+-++..++
T Consensus 19 eeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~--g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l 96 (158)
T 1zu2_A 19 EQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHS--ISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFL 96 (158)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccch--hhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhccc
Confidence 789999999999999999999999999999864110 1111235789999999999999999999999998887652
Q ss_pred --------CChHHHHHHHHHHHHhCCCCh
Q 009766 120 --------SSIDNELRLLDKFQKADSRNF 140 (526)
Q Consensus 120 --------~~~eeELe~~dkaLeiDprNy 140 (526)
+.+++++++|+++++++|.|.
T Consensus 97 ~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 97 TPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred CcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 246677777777777777653
No 141
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.62 E-value=1.9e-07 Score=86.85 Aligned_cols=116 Identities=9% Similarity=-0.026 Sum_probs=75.7
Q ss_pred hhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHH
Q 009766 85 SILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYT 164 (526)
Q Consensus 85 ~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~t 164 (526)
..++++++.++.++..||++..+|...+-++..+. .++....... . .++++.++
T Consensus 16 ~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~-~~~~g~~al~------------------------~-~~eAi~~l 69 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELS-QFHSISDAKQ------------------------M-IQEAITKF 69 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-HHSCHHHHHH------------------------H-HHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhc-ccchhhhhHh------------------------H-HHHHHHHH
Confidence 46777777777777777777777777777776542 2221111110 0 24677777
Q ss_pred HHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHH
Q 009766 165 EDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYH 227 (526)
Q Consensus 165 dkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~ 227 (526)
+++|+++|.+..||++++.++..++.. ..+.....+.++++++++++|+.++|++...|..+
T Consensus 70 e~AL~ldP~~~~A~~~LG~ay~~lg~l-~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al 131 (158)
T 1zu2_A 70 EEALLIDPKKDEAVWCIGNAYTSFAFL-TPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSL 131 (158)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHhCcCcHHHHHHHHHHHHHhccc-CcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 777777777777777777777766531 00001112347999999999999999998666443
No 142
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.60 E-value=1.1e-07 Score=100.97 Aligned_cols=126 Identities=7% Similarity=0.008 Sum_probs=106.9
Q ss_pred hhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHH
Q 009766 85 SILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYT 164 (526)
Q Consensus 85 ~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~t 164 (526)
..++++++.+++++..+|++..+|..++.++.+.+ .+++++++++++++++|.+..+|..++.++..++.+. ++++++
T Consensus 20 g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~-eA~~~~ 97 (477)
T 1wao_1 20 KDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE-CYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFR-AALRDY 97 (477)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHH-HHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH-HHHHHH
Confidence 57999999999999999999999999999999885 9999999999999999999999999999999999994 899999
Q ss_pred HHHHHhccCChhHHHHHHHH--HHHhhhhhccCccchhhhHHHHHHHHH-----------HHHHhCCCCcccH
Q 009766 165 EDMICNNFSNYSAWHNRSLL--LSNLLKRKVEGFVSKEKVLPDEYEFVH-----------QAIFTDPDDQSGW 224 (526)
Q Consensus 165 dkaI~~nPsNySAW~yR~~L--L~~L~~~~~~g~~~~~eileeELe~v~-----------~AI~~dP~DeSaW 224 (526)
+++++.+|.+..+|.+.+.+ +...++ ++++++.+. +++.++|+...++
T Consensus 98 ~~al~~~p~~~~~~~~l~~~~~~~~~g~------------~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 158 (477)
T 1wao_1 98 ETVVKVKPHDKDAKMKYQECNKIVKQKA------------FERAIAGDEHKRSVVDSLDIESMTIEDEYSGPK 158 (477)
T ss_dssp HHHHHHSTTCTTHHHHHHHHHHHHHHHH------------HCCC------CCSTTTCCTTSSCCCCTTCCSCC
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHH------------HHHHhccccccchhHhhhhhhhccccccccccc
Confidence 99999999999999998887 333332 566677777 7777777765554
No 143
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.59 E-value=5.8e-07 Score=84.65 Aligned_cols=175 Identities=9% Similarity=-0.092 Sum_probs=136.9
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCc----HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh------CC
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPEL----YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ------NF 102 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~----ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~------NP 102 (526)
.....|++ ++|+..+.+++..+|++ ..+|...+.+....+ .+++++.++++++.. .|
T Consensus 14 ~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 14 RLCKSGDC-RAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLH------------DYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHhccH-HHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHhhcccccH
Confidence 44567899 89999999999999998 467888888887776 478999999998876 56
Q ss_pred CChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChh------hhhHHHHHHHHhCc--------------------C
Q 009766 103 KSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFH------AWNYRRFVAASMNR--------------------S 156 (526)
Q Consensus 103 Ksy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyh------AW~yRr~lL~~Lg~--------------------~ 156 (526)
....+|...+.++...+ .+++++..+.+++++.++... ++...+.+...++. +
T Consensus 81 ~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 159 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLG-NFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNAL 159 (338)
T ss_dssp HHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHH
Confidence 66788888888888874 899999999999998776544 88888888888887 5
Q ss_pred hHHHHHHHHHHHHh------ccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcc------cH
Q 009766 157 EEDELKYTEDMICN------NFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQS------GW 224 (526)
Q Consensus 157 ~eeELe~tdkaI~~------nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeS------aW 224 (526)
+++++++.+++.. .+....++...+.++...+. ++++++++.+++...|.... +|
T Consensus 160 -~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 226 (338)
T 3ro2_A 160 -QAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGN------------FRDAVIAHEQRLLIAKEFGDKAAERRAY 226 (338)
T ss_dssp -HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC------------HHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC------------HHHHHHHHHHHHHHHHhcCChHHHHHHH
Confidence 5788888888775 33334567777777766654 68899999999888776554 66
Q ss_pred HHHHHHHccc
Q 009766 225 FYHLWLLDQT 234 (526)
Q Consensus 225 ~Y~r~LL~~~ 234 (526)
.....++...
T Consensus 227 ~~l~~~~~~~ 236 (338)
T 3ro2_A 227 SNLGNAYIFL 236 (338)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 6666666553
No 144
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.58 E-value=5.6e-07 Score=88.03 Aligned_cols=147 Identities=7% Similarity=-0.053 Sum_probs=115.6
Q ss_pred CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q 009766 56 PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA 135 (526)
Q Consensus 56 Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei 135 (526)
|+...+|..++.++...+ .+++++..+++++..+|.+..+|..++.++..++ .+++++..+++++++
T Consensus 1 p~~a~~~~~~g~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~-~~~~A~~~~~~al~~ 67 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGR------------KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ-QPEQALADCRRALEL 67 (281)
T ss_dssp CCCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHTTS
T ss_pred ChhHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHh
Confidence 667888999999888876 4899999999999999999999999999999885 999999999999999
Q ss_pred CCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHH
Q 009766 136 DSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIF 215 (526)
Q Consensus 136 DprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~ 215 (526)
+|.|..+|..++.++..+|.+ +++++.+.++++.+|.+........+..... .+..........
T Consensus 68 ~p~~~~~~~~lg~~~~~~g~~-~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 131 (281)
T 2c2l_A 68 DGQSVKAHFFLGQCQLEMESY-DEAIANLQRAYSLAKEQRLNFGDDIPSALRI---------------AKKKRWNSIEER 131 (281)
T ss_dssp CTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHHHHTTCCCCSHHHHHHHH---------------HHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCccchhhHHHHHHHHHHH---------------HHHHHHHHHHHH
Confidence 999999999999999999998 4899999999999997743221111111111 111222223335
Q ss_pred hCCCCcccHHHHHHHH
Q 009766 216 TDPDDQSGWFYHLWLL 231 (526)
Q Consensus 216 ~dP~DeSaW~Y~r~LL 231 (526)
..|.+.....+.+.++
T Consensus 132 ~~~~~~~i~~~l~~l~ 147 (281)
T 2c2l_A 132 RIHQESELHSYLTRLI 147 (281)
T ss_dssp CCCCCCHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHH
Confidence 6777887777776665
No 145
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.58 E-value=1.1e-05 Score=76.38 Aligned_cols=161 Identities=10% Similarity=-0.018 Sum_probs=96.8
Q ss_pred hcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh----hhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHH
Q 009766 36 HNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQH----KLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHR 111 (526)
Q Consensus 36 ~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~----L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HR 111 (526)
..|++ ++|+.++.+++. |++..+|...+.++.. .+ .+++++.++++++..+ +..+|+..
T Consensus 18 ~~~~~-~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~------------~~~~A~~~~~~a~~~~--~~~a~~~l 80 (273)
T 1ouv_A 18 KEKDF-TQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEK------------NLKKAASFYAKACDLN--YSNGCHLL 80 (273)
T ss_dssp HTTCH-HHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCC------------CHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred hCCCH-HHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCC------------CHHHHHHHHHHHHHCC--CHHHHHHH
Confidence 34555 666666666666 5566666666666665 32 3566666666666654 56666666
Q ss_pred HHHHHh----CCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHH----hCcChHHHHHHHHHHHHhccCChhHHHHHHH
Q 009766 112 KWILSK----GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAAS----MNRSEEDELKYTEDMICNNFSNYSAWHNRSL 183 (526)
Q Consensus 112 rwvL~k----l~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~----Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~ 183 (526)
+.++.. . ..+++++.+++++++.+ +..+|...+.++.. .+.+ +++++++.++++.+ +..++.+.+.
T Consensus 81 g~~~~~g~~~~-~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~-~~A~~~~~~a~~~~--~~~a~~~lg~ 154 (273)
T 1ouv_A 81 GNLYYSGQGVS-QNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDF-KKAVEYFTKACDLN--DGDGCTILGS 154 (273)
T ss_dssp HHHHHHTSSSC-CCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCH-HHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred HHHHhCCCCcc-cCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCH-HHHHHHHHHHHhcC--cHHHHHHHHH
Confidence 666665 4 36666666666666653 56666666666665 5554 35666666666654 5556666666
Q ss_pred HHHH----hhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 184 LLSN----LLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 184 LL~~----L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
++.. .+. ++++++++.+++.. ++..+++.+..++..
T Consensus 155 ~~~~~~~~~~~------------~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~ 194 (273)
T 1ouv_A 155 LYDAGRGTPKD------------LKKALASYDKACDL--KDSPGCFNAGNMYHH 194 (273)
T ss_dssp HHHHTSSSCCC------------HHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCC------------HHHHHHHHHHHHHC--CCHHHHHHHHHHHHc
Confidence 6554 222 46666666666655 344555555555443
No 146
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.56 E-value=1.2e-06 Score=87.67 Aligned_cols=157 Identities=11% Similarity=-0.019 Sum_probs=131.6
Q ss_pred HhhcCCCcHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC---
Q 009766 34 NHHNHIYSKEAVELSTKLLET------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS--- 104 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~i------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs--- 104 (526)
....|+| ++|+..+.+++.+ .+....+|+..+.+...++ .+.+++.++++++...++.
T Consensus 113 ~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~------------~~~~A~~~~~~al~~~~~~~~~ 179 (383)
T 3ulq_A 113 ELDQREY-LSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMK------------QTYFSMDYARQAYEIYKEHEAY 179 (383)
T ss_dssp HHHTTCH-HHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHTCSTT
T ss_pred HHHhcCH-HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHHhCccc
Confidence 3567899 8999999999998 3335688888999888886 4899999999999885544
Q ss_pred ----hHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCCh------hhhhHHHHHHHHhCcChHHHHHHHHHHHH-----
Q 009766 105 ----YGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNF------HAWNYRRFVAASMNRSEEDELKYTEDMIC----- 169 (526)
Q Consensus 105 ----y~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNy------hAW~yRr~lL~~Lg~~~eeELe~tdkaI~----- 169 (526)
..++...+.+...++ .++++++++++++++.+++- .++...+.+...+|.+. ++++++.+++.
T Consensus 180 ~~~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~-~A~~~~~~al~~~~~~ 257 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLK-QYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYE-DAIPYFKRAIAVFEES 257 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHhh
Confidence 357788888888874 89999999999999876654 48999999999999984 89999999999
Q ss_pred hc-cCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhC
Q 009766 170 NN-FSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTD 217 (526)
Q Consensus 170 ~n-PsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~d 217 (526)
.+ |....++...+.++..++. ++++++++.+++.+.
T Consensus 258 ~~~~~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 258 NILPSLPQAYFLITQIHYKLGK------------IDKAHEYHSKGMAYS 294 (383)
T ss_dssp TCGGGHHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHCCC------------HHHHHHHHHHHHHHH
Confidence 56 8888899999999888765 688999999998874
No 147
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.54 E-value=3.9e-07 Score=93.70 Aligned_cols=114 Identities=13% Similarity=-0.043 Sum_probs=72.1
Q ss_pred HHHHHHHhhcCCCcHHHHHHHHHHHH----------------hCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHH
Q 009766 28 QSQFLHNHHNHIYSKEAVELSTKLLE----------------TNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEEL 91 (526)
Q Consensus 28 ~~~~~~~~~~geyseEAL~lt~kaL~----------------iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL 91 (526)
...-......|+| ++|+..+.++|. .+|.+..+|+.++.++..++ .+++++
T Consensus 227 ~~~g~~~~~~g~~-~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g------------~~~~A~ 293 (370)
T 1ihg_A 227 KNIGNTFFKSQNW-EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMS------------DWQGAV 293 (370)
T ss_dssp HHHHHHHHHTTCH-HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTT------------CHHHHH
T ss_pred HHHHHHHHHhcCH-HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhcc------------CHHHHH
Confidence 3334455567899 899999999999 55555666666666655554 356666
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCc
Q 009766 92 RVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNR 155 (526)
Q Consensus 92 ~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~ 155 (526)
.+++++|..+|++..+|+.++.++..++ .++++++.++++++++|.|..+|.....+...++.
T Consensus 294 ~~~~~al~~~p~~~~a~~~lg~~~~~~g-~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 294 DSCLEALEIDPSNTKALYRRAQGWQGLK-EYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKA 356 (370)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCchhHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 6666666666666666666666665553 56666666666666666666665555555554443
No 148
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.54 E-value=1.8e-07 Score=94.39 Aligned_cols=186 Identities=8% Similarity=-0.005 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHH-------HHHHHhhhcCCCC----------CCch-
Q 009766 21 AEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYR-------KLAVQHKLTENDS----------DPDS- 82 (526)
Q Consensus 21 ~ek~r~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~R-------r~vL~~L~~~~~s----------dPe~- 82 (526)
++.++.+++.-+-. ..+.+ .+|+..+.+++.++|+...+|+.| +.+|..+.+..++ .|..
T Consensus 4 ~~~~~~~~~~~~~~-~~~d~-~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l 81 (282)
T 4f3v_A 4 TDRLASLFESAVSM-LPMSE-ARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTL 81 (282)
T ss_dssp HHHHHHHHHHHHHH-TTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGG
T ss_pred hHHHHHHHHHHhcc-cCCCH-HHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhh
Confidence 46677777666654 56777 899999999999999999999999 8888888753221 1110
Q ss_pred --------------------------------hhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHH
Q 009766 83 --------------------------------LKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLD 130 (526)
Q Consensus 83 --------------------------------~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~d 130 (526)
....|+++.+.++.++..+|... +.+.+..+..+.+ +|++++.+++
T Consensus 82 ~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~-r~~dA~~~l~ 159 (282)
T 4f3v_A 82 NARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAE-RWTDVIDQVK 159 (282)
T ss_dssp CCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTT-CHHHHHHHHT
T ss_pred hhhhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcC-CHHHHHHHHH
Confidence 13678999999999999999888 8888998888885 9999999999
Q ss_pred HHHHhCCCC---hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhc--cC-ChhHHHHHHHHHHHhhhhhccCccchhhhHH
Q 009766 131 KFQKADSRN---FHAWNYRRFVAASMNRSEEDELKYTEDMICNN--FS-NYSAWHNRSLLLSNLLKRKVEGFVSKEKVLP 204 (526)
Q Consensus 131 kaLeiDprN---yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~n--Ps-NySAW~yR~~LL~~L~~~~~~g~~~~~eile 204 (526)
.++... .+ ..++.+.+.++..+|.+ ++++.++++++... |. ...++.+++.+|..+++ .+
T Consensus 160 ~a~~~~-d~~~~~~a~~~LG~al~~LG~~-~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr------------~d 225 (282)
T 4f3v_A 160 SAGKWP-DKFLAGAAGVAHGVAAANLALF-TEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN------------ES 225 (282)
T ss_dssp TGGGCS-CHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTC------------HH
T ss_pred HhhccC-CcccHHHHHHHHHHHHHHCCCH-HHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCC------------HH
Confidence 776643 33 24899999999999998 48999999998654 66 55699999999999986 69
Q ss_pred HHHHHHHHHHHhCCCCcccHH
Q 009766 205 DEYEFVHQAIFTDPDDQSGWF 225 (526)
Q Consensus 205 eELe~v~~AI~~dP~DeSaW~ 225 (526)
++.+.+++++..+|+ ..+|.
T Consensus 226 eA~~~l~~a~a~~P~-~~~~~ 245 (282)
T 4f3v_A 226 AAVALLEWLQTTHPE-PKVAA 245 (282)
T ss_dssp HHHHHHHHHHHHSCC-HHHHH
T ss_pred HHHHHHHHHHhcCCc-HHHHH
Confidence 999999999999999 76663
No 149
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.53 E-value=1.3e-05 Score=77.85 Aligned_cols=168 Identities=15% Similarity=0.076 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHH-----HHH-HHHHHHHhhhcCCCCCCchhhhhHHHHHHHHH
Q 009766 22 EKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYT-----AWN-YRKLAVQHKLTENDSDPDSLKSILDEELRVVE 95 (526)
Q Consensus 22 ek~r~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~yt-----AWN-~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e 95 (526)
+....+..........|+| ++|++.+.++|...|.... .|. +.+.+.... ..+++++.+++
T Consensus 73 ~~~~~l~~~~~~~~~~~~y-~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~A~~~~~ 139 (293)
T 2qfc_A 73 ERKKQFKDQVIMLCKQKRY-KEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKK------------VDYEYCILELK 139 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTS------------SCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhH-HHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcC------------CCHHHHHHHHH
Confidence 3445556666777789999 8999999999999887542 222 233333333 25899999999
Q ss_pred HHHHhCCCC------hHHHHHHHHHHHhCCCChHHHHHHHHHHH---HhCCCCh----hhhhHHHHHHHHhCcChHHHHH
Q 009766 96 SALRQNFKS------YGAWHHRKWILSKGHSSIDNELRLLDKFQ---KADSRNF----HAWNYRRFVAASMNRSEEDELK 162 (526)
Q Consensus 96 ~aL~~NPKs------y~AW~HRrwvL~kl~~~~eeELe~~dkaL---eiDprNy----hAW~yRr~lL~~Lg~~~eeELe 162 (526)
+++...++. ..+|+..+.++...+ .+++++.++++++ +..+.+. .++.+.+.++..++.++ ++++
T Consensus 140 ~al~~~~~~~~~~~~~~~~~~lg~~y~~~~-~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~-~Al~ 217 (293)
T 2qfc_A 140 KLLNQQLTGIDVYQNLYIENAIANIYAENG-YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYE-ESLY 217 (293)
T ss_dssp HHHTTCCCSSCTTHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHH-HHHH
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHH-HHHH
Confidence 999877665 568888899998874 8999999999999 4455533 68999999999999994 8999
Q ss_pred HHHHHHHhccCC------hhHHHHHHHHHHHhhhhhccCccchhhhHHHH-HHHHHHHHHh
Q 009766 163 YTEDMICNNFSN------YSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDE-YEFVHQAIFT 216 (526)
Q Consensus 163 ~tdkaI~~nPsN------ySAW~yR~~LL~~L~~~~~~g~~~~~eileeE-Le~v~~AI~~ 216 (526)
++++++...+.. ..++++.+.+...++. ++++ .+++++|+.+
T Consensus 218 ~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~------------~~~Ai~~~~~~Al~~ 266 (293)
T 2qfc_A 218 QVNKAIEISCRINSMALIGQLYYQRGECLRKLEY------------EEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTC------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCC------------cHHHHHHHHHHHHHH
Confidence 999999876431 5678888888888765 4666 5666776643
No 150
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.53 E-value=2e-07 Score=78.35 Aligned_cols=100 Identities=12% Similarity=0.037 Sum_probs=71.9
Q ss_pred cCCCcHHHHHHHHHHHHh---CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 009766 37 NHIYSKEAVELSTKLLET---NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKW 113 (526)
Q Consensus 37 ~geyseEAL~lt~kaL~i---NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrw 113 (526)
.|++ ++|+..+.++|.+ +|++..+|...+.++..++ .+++++..+++++..+|++..+|...+.
T Consensus 3 ~g~~-~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~------------~~~~A~~~~~~al~~~p~~~~~~~~l~~ 69 (117)
T 3k9i_A 3 LGLE-AQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLG------------EYRKAEAVLANGVKQFPNHQALRVFYAM 69 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCcH-HHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 4566 5777788888887 4777778887777777765 3777888888888888888888877777
Q ss_pred HHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHH
Q 009766 114 ILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVA 150 (526)
Q Consensus 114 vL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL 150 (526)
++...+ .++++++.+.++++.+|.+.....|..-+.
T Consensus 70 ~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 70 VLYNLG-RYEQGVELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHT-CHHHHHHHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred HHHHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 777764 777788888888888777777666655443
No 151
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.53 E-value=3.3e-06 Score=70.30 Aligned_cols=105 Identities=10% Similarity=-0.027 Sum_probs=83.6
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcH---HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC---hH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELY---TAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS---YG 106 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~y---tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs---y~ 106 (526)
.....|+| ++|+..+.+++..+|++. .+|...+.+....+ .+++++..++.++..+|++ ..
T Consensus 11 ~~~~~~~~-~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~------------~~~~A~~~~~~~~~~~p~~~~~~~ 77 (129)
T 2xev_A 11 DALKNGKY-DDASQLFLSFLELYPNGVYTPNALYWLGESYYATR------------NFQLAEAQFRDLVSRYPTHDKAAG 77 (129)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTSTTHHH
T ss_pred HHHHhCCH-HHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhc------------cHHHHHHHHHHHHHHCCCCcccHH
Confidence 44567788 788888888888888888 78888888887775 4788888888888888888 77
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHH
Q 009766 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAA 151 (526)
Q Consensus 107 AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~ 151 (526)
++...+.++...+ .+++++..++++++.+|.+..++.-+..+-.
T Consensus 78 ~~~~la~~~~~~g-~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~ 121 (129)
T 2xev_A 78 GLLKLGLSQYGEG-KNTEAQQTLQQVATQYPGSDAARVAQERLQS 121 (129)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CHHHHHHHHHHHHHHCCCChHHHHHHHHHHH
Confidence 7888888888774 7888888888888888888777666655443
No 152
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.48 E-value=2.5e-06 Score=69.81 Aligned_cols=119 Identities=8% Similarity=-0.041 Sum_probs=102.5
Q ss_pred CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q 009766 56 PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA 135 (526)
Q Consensus 56 Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei 135 (526)
|+...+|+..+.+....+ .+++++.++++++..+|.+..+|...+.++...+ .+++++.+++++++.
T Consensus 1 ~~~~~~~~~l~~~~~~~~------------~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~-~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 1 GKQALKEKELGNDAYKKK------------DFDTALKHYDKAKELDPTNMTYITNQAAVYFEKG-DYNKCRELCEKAIEV 67 (131)
T ss_dssp CHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhc------------CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhh
Confidence 345677888888877765 5899999999999999999999999999998774 899999999999999
Q ss_pred CCCC-------hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhh
Q 009766 136 DSRN-------FHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLL 189 (526)
Q Consensus 136 DprN-------yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~ 189 (526)
+|.+ ..+|...+.+...++.+ +++++++.++++.+| +...+.....+...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~la~~~~~~~~~-~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 68 GRENREDYRQIAKAYARIGNSYFKEEKY-KDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 9988 88999999999999988 489999999999998 6777777776666554
No 153
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.47 E-value=4.8e-06 Score=80.81 Aligned_cols=167 Identities=13% Similarity=0.001 Sum_probs=124.6
Q ss_pred HHHHHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhC
Q 009766 26 VLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYT----AWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQN 101 (526)
Q Consensus 26 ~l~~~~~~~~~~geyseEAL~lt~kaL~iNPd~yt----AWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~N 101 (526)
.+...+......|+| ++|+.++.+++...+.... +..+......... ...+++++..+++++...
T Consensus 77 ~l~~~i~~~~~~~~y-~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~~~Ai~~~~~al~~~ 145 (293)
T 3u3w_A 77 QFKDQVIMLCKQKRY-KEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLK----------KVDYEYCILELKKLLNQQ 145 (293)
T ss_dssp HHHHHHHHHHHTTCH-HHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTT----------SSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhH-HHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHc----------ccCHHHHHHHHHHHHHHh
Confidence 344445566678999 8999999999998887655 2222222222221 125899999999999976
Q ss_pred CCChH------HHHHHHHHHHhCCCChHHHHHHHHHHHHh-------CCCChhhhhHHHHHHHHhCcChHHHHHHHHHHH
Q 009766 102 FKSYG------AWHHRKWILSKGHSSIDNELRLLDKFQKA-------DSRNFHAWNYRRFVAASMNRSEEDELKYTEDMI 168 (526)
Q Consensus 102 PKsy~------AW~HRrwvL~kl~~~~eeELe~~dkaLei-------DprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI 168 (526)
++... +++..+.+....+ .+++++.+++++++. .+....++.+.+.+...++.+ +++++++++++
T Consensus 146 ~~~~~~~~~~~~~~~lg~~y~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y-~~A~~~~~~al 223 (293)
T 3u3w_A 146 LTGIDVYQNLYIENAIANIYAENG-YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRY-EESLYQVNKAI 223 (293)
T ss_dssp CCCSCTTHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHH-HHHHHHHHHHH
Confidence 55443 6777788887774 899999999999952 233345888999999999999 48999999999
Q ss_pred HhccCC------hhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHh
Q 009766 169 CNNFSN------YSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFT 216 (526)
Q Consensus 169 ~~nPsN------ySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~ 216 (526)
+..+.+ ..++++++.+...++. .++++++++++|+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~-----------~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 224 EISCRINSMALIGQLYYQRGECLRKLEY-----------EEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHTTBCTTHHHHHHHHHHHHHHTTC-----------CHHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHhCC-----------cHHHHHHHHHHHHHH
Confidence 987655 5688899999888763 157888888888854
No 154
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.46 E-value=2.2e-06 Score=84.30 Aligned_cols=162 Identities=7% Similarity=-0.015 Sum_probs=124.7
Q ss_pred HhhcCCCcHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC---
Q 009766 34 NHHNHIYSKEAVELSTKLLETNPEL------YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS--- 104 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iNPd~------ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs--- 104 (526)
.+..|.| ++|+..+.+++.+.++. ..+++..+.++..++ .+++++.++++++.+.++.
T Consensus 46 ~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g------------~~~~A~~~~~~Al~l~~~~g~~ 112 (307)
T 2ifu_A 46 FKNAKQL-EQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQ------------RMPEAVQYIEKASVMYVENGTP 112 (307)
T ss_dssp HHHTTCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT------------CGGGGHHHHHHHHHHHHTTTCH
T ss_pred HHHcCCH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC------------CHHHHHHHHHHHHHHHHHcCCH
Confidence 3456888 89999999999987643 557777777777765 4688889999998775432
Q ss_pred ---hHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCC------hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCCh
Q 009766 105 ---YGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRN------FHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175 (526)
Q Consensus 105 ---y~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprN------yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNy 175 (526)
..++...+.++.. +.++++++++++++++.+.. ..++...+.++..+|.+. ++++++++++...+.+.
T Consensus 113 ~~~a~~~~~lg~~~~~--g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~-~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 113 DTAAMALDRAGKLMEP--LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFD-EAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHcC
Confidence 3567777777766 58999999999999998764 467888899999999984 89999999999987665
Q ss_pred h------HHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccH
Q 009766 176 S------AWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGW 224 (526)
Q Consensus 176 S------AW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW 224 (526)
. ++..++.+...+++ +++++.++.+++ .+|+.....
T Consensus 190 ~~~~~~~~~~~~g~~~~~~g~------------~~~A~~~~~~al-~~p~~~~~~ 231 (307)
T 2ifu_A 190 NYPTCYKKCIAQVLVQLHRAD------------YVAAQKCVRESY-SIPGFSGSE 231 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC------------HHHHHHHHHHHT-TSTTSTTSH
T ss_pred ChhHHHHHHHHHHHHHHHcCC------------HHHHHHHHHHHh-CCCCCCCCH
Confidence 3 33334444333332 799999999999 999877655
No 155
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.45 E-value=2.5e-07 Score=77.80 Aligned_cols=93 Identities=9% Similarity=-0.012 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHH
Q 009766 86 ILDEELRVVESALRQ---NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELK 162 (526)
Q Consensus 86 ~~~eEL~~~e~aL~~---NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe 162 (526)
.+++++.++++++.. +|.+..+|...+.++...+ .++++++.++++++++|.+..+|.+.+.++..+|.+. ++++
T Consensus 5 ~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~-~A~~ 82 (117)
T 3k9i_A 5 LEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLG-EYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYE-QGVE 82 (117)
T ss_dssp --CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH-HHHH
T ss_pred cHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHH-HHHH
Confidence 344445555555554 3555555555555554442 4555555555555555555555555555555555442 4455
Q ss_pred HHHHHHHhccCChhHHHH
Q 009766 163 YTEDMICNNFSNYSAWHN 180 (526)
Q Consensus 163 ~tdkaI~~nPsNySAW~y 180 (526)
++.+++..+|.|.....|
T Consensus 83 ~~~~al~~~p~~~~~~~~ 100 (117)
T 3k9i_A 83 LLLKIIAETSDDETIQSY 100 (117)
T ss_dssp HHHHHHHHHCCCHHHHHT
T ss_pred HHHHHHHhCCCcHHHHHH
Confidence 555555555554444333
No 156
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.42 E-value=1.9e-06 Score=88.65 Aligned_cols=118 Identities=7% Similarity=-0.126 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHH----------------hCCCChHHHHHHHHHHHhCCCCh
Q 009766 59 YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALR----------------QNFKSYGAWHHRKWILSKGHSSI 122 (526)
Q Consensus 59 ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~----------------~NPKsy~AW~HRrwvL~kl~~~~ 122 (526)
..+|+.++.++...+ .+++++..++++|. .+|.+..+|..++.++.+++ .+
T Consensus 223 a~~~~~~g~~~~~~g------------~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g-~~ 289 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQ------------NWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMS-DW 289 (370)
T ss_dssp HHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTT-CH
T ss_pred HHHHHHHHHHHHHhc------------CHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhcc-CH
Confidence 456777888777765 58999999999998 88999999999999999885 99
Q ss_pred HHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhh
Q 009766 123 DNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLK 190 (526)
Q Consensus 123 eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~ 190 (526)
++++++++++++++|.|..+|..++.++..++.+ +++++++.++++.+|.|..++.....++..++.
T Consensus 290 ~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~-~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 290 QGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEY-DQALADLKKAQEIAPEDKAIQAELLKVKQKIKA 356 (370)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 489999999999999999999999988887764
No 157
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.41 E-value=2.5e-06 Score=83.66 Aligned_cols=173 Identities=9% Similarity=-0.036 Sum_probs=127.1
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHhhhcCC--------CCCCchhhhhHHHHHHHHHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPEL------YTAWNYRKLAVQHKLTEN--------DSDPDSLKSILDEELRVVESAL 98 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~------ytAWN~Rr~vL~~L~~~~--------~sdPe~~~~~~~eEL~~~e~aL 98 (526)
.....|++ ++|+..+.+++.+.|+. ..+++..+.+....+... ...++.....+++++..+++++
T Consensus 96 ~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al 174 (406)
T 3sf4_A 96 TLKVLGNF-DEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENL 174 (406)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCH-HHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHH
Confidence 34467888 89999999999988775 458888888888776310 0112223344888899999888
Q ss_pred Hh------CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChh------hhhHHHHHHHHhCcChHHHHHHHHH
Q 009766 99 RQ------NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFH------AWNYRRFVAASMNRSEEDELKYTED 166 (526)
Q Consensus 99 ~~------NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyh------AW~yRr~lL~~Lg~~~eeELe~tdk 166 (526)
.. .|....+|...+.++...+ .+++++.++++++++.+++.. +|...+.+....|.+ +++++++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~-~~A~~~~~~ 252 (406)
T 3sf4_A 175 SLVTALGDRAAQGRAFGNLGNTHYLLG-NFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEF-ETASEYYKK 252 (406)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHT-BHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHH
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCh-HHHHHHHHH
Confidence 76 4444567888888887774 899999999999998777655 888888888888888 479999999
Q ss_pred HHHhccCC------hhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCC
Q 009766 167 MICNNFSN------YSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220 (526)
Q Consensus 167 aI~~nPsN------ySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~D 220 (526)
++...+.. ..++...+.++...+. ++++++++.+++...+..
T Consensus 253 al~~~~~~~~~~~~~~~~~~la~~~~~~g~------------~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 253 TLLLARQLKDRAVEAQSCYSLGNTYTLLQD------------YEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCcCchHHHHHHHHHHHHHHHhCc------------HHHHHHHHHHHHHHHHhc
Confidence 99887766 5566777777666554 566777777766665443
No 158
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.40 E-value=7.2e-07 Score=88.76 Aligned_cols=159 Identities=9% Similarity=-0.083 Sum_probs=127.1
Q ss_pred hhcCCCcHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh------CC
Q 009766 35 HHNHIYSKEAVELSTKLLET------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ------NF 102 (526)
Q Consensus 35 ~~~geyseEAL~lt~kaL~i------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~------NP 102 (526)
...|++ ++|+..+.+++.+ +|....+|+..+.++...+ .+++++..+++++.. .|
T Consensus 97 ~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~ 163 (411)
T 4a1s_A 97 FYLGDY-NKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMG------------RFDEAAICCERHLTLARQLGDRL 163 (411)
T ss_dssp HHHTCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHCCCH-HHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHHHHHhhchH
Confidence 356888 8999999999998 7888899999999998886 478999999999987 66
Q ss_pred CChHHHHHHHHHHHhCCCC-----------------hHHHHHHHHHHHHhC------CCChhhhhHHHHHHHHhCcChHH
Q 009766 103 KSYGAWHHRKWILSKGHSS-----------------IDNELRLLDKFQKAD------SRNFHAWNYRRFVAASMNRSEED 159 (526)
Q Consensus 103 Ksy~AW~HRrwvL~kl~~~-----------------~eeELe~~dkaLeiD------prNyhAW~yRr~lL~~Lg~~~ee 159 (526)
....+|...+.++...+ . ++++++++.+++++. +....+|...+.+....|.+. +
T Consensus 164 ~~~~~~~~l~~~~~~~g-~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~-~ 241 (411)
T 4a1s_A 164 SEGRALYNLGNVYHAKG-KHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQ-A 241 (411)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH-H
T ss_pred HHHHHHHHHHHHHHHcC-cccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChH-H
Confidence 67778888888888764 6 889999999988864 333458888888888888884 7
Q ss_pred HHHHHHHHHHhccCChh------HHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCC
Q 009766 160 ELKYTEDMICNNFSNYS------AWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220 (526)
Q Consensus 160 ELe~tdkaI~~nPsNyS------AW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~D 220 (526)
+++++.+++...+.+.. +|.+.+.++...++ ++++++.+++++...|..
T Consensus 242 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~------------~~~A~~~~~~al~~~~~~ 296 (411)
T 4a1s_A 242 AIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQ------------FEDAAEHYKRTLALAVEL 296 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTC------------HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcC------------HHHHHHHHHHHHHHHHHc
Confidence 99999999998876655 77777777766654 577777777777776644
No 159
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.38 E-value=8.3e-06 Score=66.68 Aligned_cols=106 Identities=10% Similarity=0.014 Sum_probs=92.5
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC-------h
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS-------Y 105 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs-------y 105 (526)
.....|++ ++|+..+.+++..+|++..+|...+.++...+ .+++++.++++++..+|.+ .
T Consensus 13 ~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~------------~~~~A~~~~~~~~~~~~~~~~~~~~~~ 79 (131)
T 1elr_A 13 DAYKKKDF-DTALKHYDKAKELDPTNMTYITNQAAVYFEKG------------DYNKCRELCEKAIEVGRENREDYRQIA 79 (131)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHhcCH-HHHHHHHHHHHhcCCccHHHHHHHHHHHHHhc------------cHHHHHHHHHHHHhhccccchhHHHHH
Confidence 34567888 89999999999999999999999999998876 4899999999999999988 8
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHh
Q 009766 106 GAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASM 153 (526)
Q Consensus 106 ~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~L 153 (526)
.+|...+.++...+ .+++++++++++++.+| +..++.....+...+
T Consensus 80 ~~~~~la~~~~~~~-~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 125 (131)
T 1elr_A 80 KAYARIGNSYFKEE-KYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKIL 125 (131)
T ss_dssp HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-cHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHH
Confidence 99999999998885 89999999999999998 677776666655544
No 160
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.38 E-value=8.4e-06 Score=67.79 Aligned_cols=109 Identities=6% Similarity=-0.118 Sum_probs=94.5
Q ss_pred HHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCC
Q 009766 62 WNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSY---GAWHHRKWILSKGHSSIDNELRLLDKFQKADSR 138 (526)
Q Consensus 62 WN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy---~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDpr 138 (526)
+..++.++...+ .+++++..++.++..+|.+. .+|...+.++...+ .+++++..++++++.+|.
T Consensus 5 ~~~~a~~~~~~~------------~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~-~~~~A~~~~~~~~~~~p~ 71 (129)
T 2xev_A 5 AYNVAFDALKNG------------KYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATR-NFQLAEAQFRDLVSRYPT 71 (129)
T ss_dssp HHHHHHHHHHTT------------CHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhC------------CHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHCCC
Confidence 445555555554 58999999999999999998 79999999998885 899999999999999999
Q ss_pred C---hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHH
Q 009766 139 N---FHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLL 184 (526)
Q Consensus 139 N---yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~L 184 (526)
+ ..++...+.+...+|.+ +++++++++++..+|.+..+..-+..+
T Consensus 72 ~~~~~~~~~~la~~~~~~g~~-~~A~~~~~~~~~~~p~~~~~~~a~~~l 119 (129)
T 2xev_A 72 HDKAAGGLLKLGLSQYGEGKN-TEAQQTLQQVATQYPGSDAARVAQERL 119 (129)
T ss_dssp STTHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 9 78899999999999998 489999999999999998876655544
No 161
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.34 E-value=2e-06 Score=81.02 Aligned_cols=161 Identities=11% Similarity=-0.018 Sum_probs=124.6
Q ss_pred HHhhcCCCcHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChH
Q 009766 33 HNHHNHIYSKEAVELSTKLLET------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYG 106 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~i------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~ 106 (526)
.....|++ ++|+..+.+++.+ .|....+|...+.+....+ .+++++..+++++...++...
T Consensus 52 ~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~~~~~~ 118 (338)
T 3ro2_A 52 AYFYLHDY-AKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG------------NFDEAIVCCQRHLDISRELND 118 (338)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCH-HHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHcc------------CHHHHHHHHHHHHHHHHHhcC
Confidence 34467888 8999999999988 6667788888888888776 489999999999987766533
Q ss_pred ------HHHHHHHHHHhCCCC--------------------hHHHHHHHHHHHHh------CCCChhhhhHHHHHHHHhC
Q 009766 107 ------AWHHRKWILSKGHSS--------------------IDNELRLLDKFQKA------DSRNFHAWNYRRFVAASMN 154 (526)
Q Consensus 107 ------AW~HRrwvL~kl~~~--------------------~eeELe~~dkaLei------DprNyhAW~yRr~lL~~Lg 154 (526)
++...+.+....+ . ++++++++++++.+ .+....++...+.+....+
T Consensus 119 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 197 (338)
T 3ro2_A 119 KVGEARALYNLGNVYHAKG-KSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLG 197 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHcC-cccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Confidence 7777777777653 5 78899999888876 3444567888888888888
Q ss_pred cChHHHHHHHHHHHHhccCChh------HHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCC
Q 009766 155 RSEEDELKYTEDMICNNFSNYS------AWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220 (526)
Q Consensus 155 ~~~eeELe~tdkaI~~nPsNyS------AW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~D 220 (526)
.+ ++++++++++++..+.+.. +|...+.++...+. ++++++.+.+++...|..
T Consensus 198 ~~-~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~al~~~~~~ 256 (338)
T 3ro2_A 198 NF-RDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGE------------FETASEYYKKTLLLARQL 256 (338)
T ss_dssp CH-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC------------HHHHHHHHHHHHHHHHHT
T ss_pred CH-HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHHHHHhh
Confidence 88 4799999999988766554 77777777776654 577888888888776655
No 162
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.28 E-value=5.2e-06 Score=68.92 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHH
Q 009766 89 EELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMI 168 (526)
Q Consensus 89 eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI 168 (526)
+++..+++++..+|.+..+|+..+.++...+ .+++++..++++++++|.+..+|...+.++..+|.+. ++++++.+++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~-~A~~~~~~al 80 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHE-QFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRA-GARQAWESGL 80 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHH-HHHHHHHHHH
Confidence 4678999999999999999999999998885 8999999999999999999999999999999999984 8999999999
Q ss_pred HhccCCh--hHHHHHHHHHHHhh
Q 009766 169 CNNFSNY--SAWHNRSLLLSNLL 189 (526)
Q Consensus 169 ~~nPsNy--SAW~yR~~LL~~L~ 189 (526)
..+|.+. .+......++..++
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 81 AAAQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HhccccccHHHHHHHHHHHHHhc
Confidence 9988644 44444444454444
No 163
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.23 E-value=7.6e-06 Score=67.90 Aligned_cols=86 Identities=12% Similarity=-0.034 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCCh
Q 009766 43 EAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSI 122 (526)
Q Consensus 43 EAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~ 122 (526)
+++..+.+++..+|++..+|+..+.++...+ .+++++..+++++..+|.+..+|...+.++...+ .+
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g------------~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g-~~ 69 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHE------------QFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG-DR 69 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-CH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcc------------CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC-CH
Confidence 5889999999999999999999999998886 4899999999999999999999999999998885 89
Q ss_pred HHHHHHHHHHHHhCCCChh
Q 009766 123 DNELRLLDKFQKADSRNFH 141 (526)
Q Consensus 123 eeELe~~dkaLeiDprNyh 141 (526)
++++..++++++++|.+..
T Consensus 70 ~~A~~~~~~al~~~~~~~~ 88 (115)
T 2kat_A 70 AGARQAWESGLAAAQSRGD 88 (115)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcccccc
Confidence 9999999999999986543
No 164
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.20 E-value=4.1e-05 Score=76.64 Aligned_cols=159 Identities=9% Similarity=-0.109 Sum_probs=128.8
Q ss_pred HhhcCCCcHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC---
Q 009766 34 NHHNHIYSKEAVELSTKLLETN------PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS--- 104 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iN------Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs--- 104 (526)
....|+| ++|+..+.+++.+. |....+++..+.+...++ .+.+++.++++++...++.
T Consensus 111 ~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~------------~~~~A~~~~~~al~~~~~~~~~ 177 (378)
T 3q15_A 111 EFDQKEY-VEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMK------------QTHVSMYHILQALDIYQNHPLY 177 (378)
T ss_dssp HHHTTCH-HHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHTSTTC
T ss_pred HHHHCCH-HHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcC------------CcHHHHHHHHHHHHHHHhCCCc
Confidence 3467899 89999999999873 235567777888887776 4899999999999875542
Q ss_pred ----hHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCC------ChhhhhHHHHHHHHhCcChHHHHHHHHHHHH-----
Q 009766 105 ----YGAWHHRKWILSKGHSSIDNELRLLDKFQKADSR------NFHAWNYRRFVAASMNRSEEDELKYTEDMIC----- 169 (526)
Q Consensus 105 ----y~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDpr------NyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~----- 169 (526)
..++...+.+....+ .++++++++++++++.++ ...++...+++...+|.+ +++++++.+++.
T Consensus 178 ~~~~~~~~~~lg~~y~~~~-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~-~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 178 SIRTIQSLFVIAGNYDDFK-HYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDD-QMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHhh
Confidence 446777777877774 899999999999997432 235777889999899988 489999999999
Q ss_pred hccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCC
Q 009766 170 NNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPD 219 (526)
Q Consensus 170 ~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~ 219 (526)
.+|....++...+.+...++. ++++++++++++.+.+.
T Consensus 256 ~~~~~~~~~~~la~~~~~~g~------------~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 256 VPDLLPKVLFGLSWTLCKAGQ------------TQKAFQFIEEGLDHITA 293 (378)
T ss_dssp CGGGHHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHCCT
T ss_pred CChhHHHHHHHHHHHHHHCCC------------HHHHHHHHHHHHHHHHH
Confidence 888888899999999888765 69999999999998665
No 165
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.07 E-value=4.4e-05 Score=59.42 Aligned_cols=82 Identities=18% Similarity=0.101 Sum_probs=50.1
Q ss_pred cHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Q 009766 58 LYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADS 137 (526)
Q Consensus 58 ~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDp 137 (526)
...+|...+.++...+ .+++++.++++++..+|.+..+|...+.++...+ .+++++.+++++++++|
T Consensus 8 ~~~~~~~la~~~~~~~------------~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~-~~~~A~~~~~~a~~~~p 74 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQG------------DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG-DYDEAIEYYQKALELDP 74 (91)
T ss_dssp HHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHHcc------------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh-hHHHHHHHHHHHHhcCC
Confidence 4455666665555544 3566666666666666666666666666666553 56666666666666666
Q ss_pred CChhhhhHHHHHHHH
Q 009766 138 RNFHAWNYRRFVAAS 152 (526)
Q Consensus 138 rNyhAW~yRr~lL~~ 152 (526)
.+..+|...+.+...
T Consensus 75 ~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 75 NNAEAKQNLGNAKQK 89 (91)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 666666665555443
No 166
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.07 E-value=3.3e-05 Score=62.25 Aligned_cols=52 Identities=8% Similarity=0.072 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCC
Q 009766 87 LDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRN 139 (526)
Q Consensus 87 ~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprN 139 (526)
+++++..+++++..+|++..+|..++.++..++ .++++++.++++++++|.+
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 20 YREAVHCYDQLITAQPQNPVGYSNKAMALIKLG-EYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHhCCCc
Confidence 455555555555555555555555555555543 5555555555555555555
No 167
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.02 E-value=1e-05 Score=64.91 Aligned_cols=83 Identities=16% Similarity=0.047 Sum_probs=56.2
Q ss_pred hhcCCCcHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHH
Q 009766 35 HHNHIYSKEAVELSTKLLETNPELYT-AWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKW 113 (526)
Q Consensus 35 ~~~geyseEAL~lt~kaL~iNPd~yt-AWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrw 113 (526)
...|+| ++|+..+.+++..+|++.. +|..++.++..++ .+++++..+++++..+|++..+|.+
T Consensus 11 ~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~------------~~~~A~~~~~~al~~~p~~~~~~~~--- 74 (99)
T 2kc7_A 11 INQGDI-ENALQALEEFLQTEPVGKDEAYYLMGNAYRKLG------------DWQKALNNYQSAIELNPDSPALQAR--- 74 (99)
T ss_dssp HHHTCH-HHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHCTTSTHHHHH---
T ss_pred HHcCCH-HHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHhcCCCcHHHHHH---
Confidence 455666 6777777777777777777 7777777776665 3677777777777777777777654
Q ss_pred HHHhCCCChHHHHHHHHHHHHhCCCC
Q 009766 114 ILSKGHSSIDNELRLLDKFQKADSRN 139 (526)
Q Consensus 114 vL~kl~~~~eeELe~~dkaLeiDprN 139 (526)
..+.+.+.++++++..+|.+
T Consensus 75 ------~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 75 ------KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp ------HHHHHHHHHHCCTTHHHHCC
T ss_pred ------HHHHHHHHHHHHHhccCccc
Confidence 12355666666666666654
No 168
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.01 E-value=3.8e-05 Score=61.85 Aligned_cols=85 Identities=7% Similarity=0.027 Sum_probs=75.8
Q ss_pred ChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCC------hhH
Q 009766 104 SYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSN------YSA 177 (526)
Q Consensus 104 sy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsN------ySA 177 (526)
+..+|..++.++...+ .++++++.++++++++|.+..+|..++.++..+|.+. +++++++++++.+|.+ ..+
T Consensus 3 ~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~-~A~~~~~~al~~~p~~~~~~~~~~~ 80 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQG-LYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYT-QAIQMCQQGLRYTSTAEHVAIRSKL 80 (111)
T ss_dssp HHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHTSCSSTTSHHHHHHH
T ss_pred hHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHhCCCccHHHHHHHH
Confidence 4578888998888774 9999999999999999999999999999999999984 8999999999999999 777
Q ss_pred HHHHHHHHHHhhh
Q 009766 178 WHNRSLLLSNLLK 190 (526)
Q Consensus 178 W~yR~~LL~~L~~ 190 (526)
+..++.++..++.
T Consensus 81 ~~~~~~~~~~~~~ 93 (111)
T 2l6j_A 81 QYRLELAQGAVGS 93 (111)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 8877777777664
No 169
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.01 E-value=7.6e-05 Score=66.35 Aligned_cols=162 Identities=12% Similarity=-0.045 Sum_probs=116.4
Q ss_pred hhcCCCcHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHH------hCCCChHH
Q 009766 35 HHNHIYSKEAVELSTKLLETNP-ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALR------QNFKSYGA 107 (526)
Q Consensus 35 ~~~geyseEAL~lt~kaL~iNP-d~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~------~NPKsy~A 107 (526)
...|.| ++|......+.. +| ....+|+..+.+....+ .+++++..+++++. ..|....+
T Consensus 3 ~~~g~~-~~A~~~~~~~~~-~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~~~~~~ 68 (203)
T 3gw4_A 3 FEAHDY-ALAERQAQALLA-HPATASGARFMLGYVYAFMD------------RFDEARASFQALQQQAQKSGDHTAEHRA 68 (203)
T ss_dssp ----CH-HHHHHHHHHHHT-STTTHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred cccccH-HHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHhC------------cHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 356778 778775444443 55 77889999999888776 48999999999998 55667788
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHh---CC----CChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhH---
Q 009766 108 WHHRKWILSKGHSSIDNELRLLDKFQKA---DS----RNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSA--- 177 (526)
Q Consensus 108 W~HRrwvL~kl~~~~eeELe~~dkaLei---Dp----rNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySA--- 177 (526)
+...+.+....+ .++++++++.+++++ .+ ....++...+.+...+|.+. ++++++.+++.........
T Consensus 69 ~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~-~A~~~~~~al~~~~~~~~~~~~ 146 (203)
T 3gw4_A 69 LHQVGMVERMAG-NWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLA-GARQEYEKSLVYAQQADDQVAI 146 (203)
T ss_dssp HHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHH-HHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHhccchHHH
Confidence 888899988874 899999999999998 33 23456788888888889884 7999999999764332222
Q ss_pred ---HHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccH
Q 009766 178 ---WHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGW 224 (526)
Q Consensus 178 ---W~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW 224 (526)
+...+.+....++ ++++++++.+++.+.......+
T Consensus 147 ~~~~~~la~~~~~~g~------------~~~A~~~~~~al~~~~~~~~~~ 184 (203)
T 3gw4_A 147 ACAFRGLGDLAQQEKN------------LLEAQQHWLRARDIFAELEDSE 184 (203)
T ss_dssp HHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHCcC------------HHHHHHHHHHHHHHHHHcCCHH
Confidence 3445555544443 6888889988887755544444
No 170
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.01 E-value=5.3e-05 Score=75.63 Aligned_cols=149 Identities=7% Similarity=-0.037 Sum_probs=119.3
Q ss_pred HHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh------CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 009766 61 AWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ------NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQK 134 (526)
Q Consensus 61 AWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~------NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLe 134 (526)
.|.+++.+....+ .+++++.++++++.. ++....+|+..+.+....+ .+++++.++.++++
T Consensus 105 ~~~~~g~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~-~~~~A~~~~~~al~ 171 (383)
T 3ulq_A 105 FNFFRGMYELDQR------------EYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMK-QTYFSMDYARQAYE 171 (383)
T ss_dssp HHHHHHHHHHHTT------------CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc------------CHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHH
Confidence 4445888777765 589999999999987 2335678888999998885 89999999999999
Q ss_pred hCCCCh-------hhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCCh------hHHHHHHHHHHHhhhhhccCccchhh
Q 009766 135 ADSRNF-------HAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY------SAWHNRSLLLSNLLKRKVEGFVSKEK 201 (526)
Q Consensus 135 iDprNy-------hAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNy------SAW~yR~~LL~~L~~~~~~g~~~~~e 201 (526)
+.++.. .++...+.+...+|.+ +++++++.+++...+.+. .++++.+.+...++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~----------- 239 (383)
T 3ulq_A 172 IYKEHEAYNIRLLQCHSLFATNFLDLKQY-EDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQ----------- 239 (383)
T ss_dssp HHHTCSTTHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------
T ss_pred HHHhCccchHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCC-----------
Confidence 865543 4788888889899998 489999999999866554 478888888887764
Q ss_pred hHHHHHHHHHHHHH-----hC-CCCcccHHHHHHHHcccc
Q 009766 202 VLPDEYEFVHQAIF-----TD-PDDQSGWFYHLWLLDQTV 235 (526)
Q Consensus 202 ileeELe~v~~AI~-----~d-P~DeSaW~Y~r~LL~~~~ 235 (526)
++++++++.+++. .+ |....+++..+.++....
T Consensus 240 -~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 278 (383)
T 3ulq_A 240 -YEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLG 278 (383)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCC
Confidence 7999999999998 56 777777877777776643
No 171
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.00 E-value=4.5e-05 Score=59.35 Aligned_cols=84 Identities=17% Similarity=0.134 Sum_probs=75.4
Q ss_pred CChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHH
Q 009766 103 KSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRS 182 (526)
Q Consensus 103 Ksy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~ 182 (526)
.+..+|...+.++...+ .+++++.+++++++.+|.+..+|...+.+....+.+ +++++++.+++..+|.+..+|..++
T Consensus 7 ~~~~~~~~la~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~-~~A~~~~~~a~~~~p~~~~~~~~l~ 84 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQG-DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDY-DEAIEYYQKALELDPNNAEAKQNLG 84 (91)
T ss_dssp HHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhH-HHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 45678888888888774 899999999999999999999999999999999998 4899999999999999999999988
Q ss_pred HHHHHh
Q 009766 183 LLLSNL 188 (526)
Q Consensus 183 ~LL~~L 188 (526)
.++..+
T Consensus 85 ~~~~~~ 90 (91)
T 1na3_A 85 NAKQKQ 90 (91)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 876543
No 172
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.90 E-value=0.00031 Score=67.97 Aligned_cols=137 Identities=12% Similarity=-0.022 Sum_probs=101.9
Q ss_pred hhHHHHHHHHHHHHHhCCCChH-----HHHHH-HHHHHhCCCChHHHHHHHHHHHHhCCCC------hhhhhHHHHHHHH
Q 009766 85 SILDEELRVVESALRQNFKSYG-----AWHHR-KWILSKGHSSIDNELRLLDKFQKADSRN------FHAWNYRRFVAAS 152 (526)
Q Consensus 85 ~~~~eEL~~~e~aL~~NPKsy~-----AW~HR-rwvL~kl~~~~eeELe~~dkaLeiDprN------yhAW~yRr~lL~~ 152 (526)
..++++++.+..++...+.... .|++. +.+.... +.+++++.+++++++..+++ ..+|+..+.+...
T Consensus 89 ~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 2qfc_A 89 KRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKK-VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 3689999999999998887543 34333 3333333 48999999999999876655 4588888999999
Q ss_pred hCcChHHHHHHHHHHH---HhccCCh----hHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCC-----
Q 009766 153 MNRSEEDELKYTEDMI---CNNFSNY----SAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDD----- 220 (526)
Q Consensus 153 Lg~~~eeELe~tdkaI---~~nPsNy----SAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~D----- 220 (526)
.+.++ ++++++++++ +..+.+. .++++.+.++..++. ++++++++++++.+.++.
T Consensus 168 ~~~~~-~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~------------y~~Al~~~~kal~~~~~~~~~~~ 234 (293)
T 2qfc_A 168 NGYLK-KGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSR------------YEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp TTCHH-HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHHHTTBCSS
T ss_pred cCCHH-HHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhh------------HHHHHHHHHHHHHHHHhcCcHHH
Confidence 99984 8999999999 5556543 588888888887765 799999999999876532
Q ss_pred -cccHHHHHHHHcccc
Q 009766 221 -QSGWFYHLWLLDQTV 235 (526)
Q Consensus 221 -eSaW~Y~r~LL~~~~ 235 (526)
..+++..+.++....
T Consensus 235 ~~~~~~~lg~~y~~~g 250 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC
Confidence 345555555555543
No 173
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.89 E-value=3.4e-05 Score=63.41 Aligned_cols=70 Identities=10% Similarity=0.022 Sum_probs=35.4
Q ss_pred CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 009766 55 NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQK 134 (526)
Q Consensus 55 NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLe 134 (526)
+|++..+|...+.++...+ .+++++..+++++..+|++..+|..++.++...+ .++++++.++++++
T Consensus 3 ~p~~~~~~~~lg~~~~~~g------------~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g-~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHD------------NASRALALFEELVETDPDYVGTYYHLGKLYERLD-RTDDAIDTYAQGIE 69 (100)
T ss_dssp --CCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT-CHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHHh
Confidence 4555555555555554443 2455555555555555555555555555555442 45555555555555
Q ss_pred hCC
Q 009766 135 ADS 137 (526)
Q Consensus 135 iDp 137 (526)
+.|
T Consensus 70 l~~ 72 (100)
T 3ma5_A 70 VAR 72 (100)
T ss_dssp HHH
T ss_pred hhh
Confidence 444
No 174
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.88 E-value=4.9e-05 Score=60.90 Aligned_cols=81 Identities=11% Similarity=0.036 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHH
Q 009766 86 ILDEELRVVESALRQNFKSYG-AWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYT 164 (526)
Q Consensus 86 ~~~eEL~~~e~aL~~NPKsy~-AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~t 164 (526)
.+++++..+++++..+|.+.. +|..++.++...+ .++++++.++++++++|.+..+|.+.. + .+.+.++
T Consensus 15 ~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~--------~-~~a~~~~ 84 (99)
T 2kc7_A 15 DIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLG-DWQKALNNYQSAIELNPDSPALQARKM--------V-MDILNFY 84 (99)
T ss_dssp CHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHCTTSTHHHHHHH--------H-HHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCCcHHHHHHHH--------H-HHHHHHH
Confidence 589999999999999999999 9999999888774 899999999999999999998886521 1 3577777
Q ss_pred HHHHHhccCChh
Q 009766 165 EDMICNNFSNYS 176 (526)
Q Consensus 165 dkaI~~nPsNyS 176 (526)
.+.+..+|++.+
T Consensus 85 ~~~~~~~p~~~~ 96 (99)
T 2kc7_A 85 NKDMYNQLEHHH 96 (99)
T ss_dssp CCTTHHHHCCSS
T ss_pred HHHhccCccccc
Confidence 888888877643
No 175
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.87 E-value=4.4e-05 Score=62.79 Aligned_cols=76 Identities=9% Similarity=0.009 Sum_probs=66.9
Q ss_pred hCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhH
Q 009766 100 QNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSA 177 (526)
Q Consensus 100 ~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySA 177 (526)
.+|++..+|...+.++...+ .++++++.++++++++|.+..+|.+.+.++..+|.+. ++++++.++++..|.+...
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~-~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHD-NASRALALFEELVETDPDYVGTYYHLGKLYERLDRTD-DAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHHSCH
T ss_pred CCccCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH-HHHHHHHHHHhhhhcCCch
Confidence 58999999999999999885 9999999999999999999999999999999999984 8999999999987765443
No 176
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.86 E-value=0.0002 Score=66.70 Aligned_cols=164 Identities=10% Similarity=-0.069 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCC--
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGH-- 119 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~-- 119 (526)
.+|+..+.++... .+..+++..+.++...+ ++.+++.++++++.. .+..+++.-+.++...+
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~------------~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~~g~~ 66 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSG------------DYQKAEYWAQKAAAQ--GDGDALALLAQLKIRNPQQ 66 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHT--TCHHHHHHHHHHTTSSTTS
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCC------------CHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCC
Confidence 4677777777765 67788888888777654 478888888888765 46788887777766521
Q ss_pred CChHHHHHHHHHHHHhCCCChhhhhHHHHHHHH----hCcChHHHHHHHHHHHHhccC--ChhHHHHHHHHHHHhhhhhc
Q 009766 120 SSIDNELRLLDKFQKADSRNFHAWNYRRFVAAS----MNRSEEDELKYTEDMICNNFS--NYSAWHNRSLLLSNLLKRKV 193 (526)
Q Consensus 120 ~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~----Lg~~~eeELe~tdkaI~~nPs--NySAW~yR~~LL~~L~~~~~ 193 (526)
.++++++.++.++++ +.+..|+..-+.++.. .+.+ +++++++.++++..++ +..++++.+.++..-.
T Consensus 67 ~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~-~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~---- 139 (212)
T 3rjv_A 67 ADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDV-AHAITLLQDAARDSESDAAVDAQMLLGLIYASGV---- 139 (212)
T ss_dssp CCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCH-HHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTS----
T ss_pred CCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCC----
Confidence 157888888888854 4677787777777654 2333 5788888888887774 4778887777765411
Q ss_pred cCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 194 EGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 194 ~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
+ ...-+++++.++.+++.. |++..+++.+..++..
T Consensus 140 -g---~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 140 -H---GPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp -S---SSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHH
T ss_pred -C---CCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHc
Confidence 0 012257888888888877 6667777666666654
No 177
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.85 E-value=5.6e-05 Score=74.18 Aligned_cols=144 Identities=10% Similarity=0.020 Sum_probs=109.1
Q ss_pred cCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC------hHHHHH
Q 009766 37 NHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS------YGAWHH 110 (526)
Q Consensus 37 ~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs------y~AW~H 110 (526)
.++| ++|+.++.++. .++...+ .+++++.++.+++...++. ..++..
T Consensus 29 ~~~~-~~A~~~~~~a~--------------~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~ 81 (307)
T 2ifu_A 29 KPDY-DSAASEYAKAA--------------VAFKNAK------------QLEQAKDAYLQEAEAHANNRSLFHAAKAFEQ 81 (307)
T ss_dssp SCCH-HHHHHHHHHHH--------------HHHHHTT------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCH-HHHHHHHHHHH--------------HHHHHcC------------CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3555 67777777763 2333333 5899999999999887654 446777
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHHhCCCC------hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCC------hhHH
Q 009766 111 RKWILSKGHSSIDNELRLLDKFQKADSRN------FHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSN------YSAW 178 (526)
Q Consensus 111 RrwvL~kl~~~~eeELe~~dkaLeiDprN------yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsN------ySAW 178 (526)
.+.++...+ .+++++.++++++++.+.. ..++...+.+... +.+ +++++++.+++...+.+ ..++
T Consensus 82 lg~~~~~~g-~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~-~~A~~~~~~Al~~~~~~~~~~~~~~~~ 158 (307)
T 2ifu_A 82 AGMMLKDLQ-RMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDL-SKAVHLYQQAAAVFENEERLRQAAELI 158 (307)
T ss_dssp HHHHHHHTT-CGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCH-HHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCC-CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCH-HHHHHHHHHHHHHHHhCCChhHHHHHH
Confidence 777777774 8999999999999985432 3567777888877 777 58999999999988765 3567
Q ss_pred HHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcc
Q 009766 179 HNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQS 222 (526)
Q Consensus 179 ~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeS 222 (526)
...+.++..+++ ++++++++.+++.+.|++..
T Consensus 159 ~~lg~~~~~~g~------------~~~A~~~~~~al~~~~~~~~ 190 (307)
T 2ifu_A 159 GKASRLLVRQQK------------FDEAAASLQKEKSMYKEMEN 190 (307)
T ss_dssp HHHHHHHHHTTC------------HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC------------HHHHHHHHHHHHHHHHHcCC
Confidence 777777776654 79999999999999887654
No 178
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.69 E-value=0.00034 Score=67.65 Aligned_cols=121 Identities=12% Similarity=-0.028 Sum_probs=98.1
Q ss_pred hcCCCcHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHH-------hCC
Q 009766 36 HNHIYSKEAVELSTKLLETNPELY------TAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALR-------QNF 102 (526)
Q Consensus 36 ~~geyseEAL~lt~kaL~iNPd~y------tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~-------~NP 102 (526)
..|+| ++|+..+.++|.+.++.. .+++..+.+...++ .+++++.++++++. ..+
T Consensus 127 ~~~~~-~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g------------~~~~A~~~~~~al~~~~~~~~~~~ 193 (293)
T 3u3w_A 127 KKVDY-EYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENG------------YLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp TSSCH-HHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred cccCH-HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHHhcccchh
Confidence 45677 899999999999755433 36888888888776 48999999999994 223
Q ss_pred CChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCC------hhhhhHHHHHHHHhCcChHHHHHHHHHHHHh
Q 009766 103 KSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRN------FHAWNYRRFVAASMNRSEEDELKYTEDMICN 170 (526)
Q Consensus 103 Ksy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprN------yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~ 170 (526)
....++++.+.++.+.+ .++++++++++++++.+.+ ..++...+.+...+|...+++++++.+++..
T Consensus 194 ~~~~~~~nlg~~y~~~~-~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 194 FDVKVRYNHAKALYLDS-RYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 34568899999999885 9999999999999987655 5789999999999996545899999998864
No 179
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.60 E-value=0.0028 Score=58.79 Aligned_cols=161 Identities=11% Similarity=-0.007 Sum_probs=124.9
Q ss_pred hcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Q 009766 36 HNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWIL 115 (526)
Q Consensus 36 ~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL 115 (526)
..+++ ++|+.++.+++.. .+..+++..+.++...+ +..++.+++.++++++. +.+..+++..+.++
T Consensus 30 ~~~~~-~~A~~~~~~a~~~--g~~~a~~~lg~~y~~~g---------~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y 95 (212)
T 3rjv_A 30 SSGDY-QKAEYWAQKAAAQ--GDGDALALLAQLKIRNP---------QQADYPQARQLAEKAVE--AGSKSGEIVLARVL 95 (212)
T ss_dssp HHTCH-HHHHHHHHHHHHT--TCHHHHHHHHHHTTSST---------TSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHH
T ss_pred cCCCH-HHHHHHHHHHHHc--CCHHHHHHHHHHHHcCC---------CCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHH
Confidence 36788 8999999999875 68899999988876621 12368999999999965 67899999999888
Q ss_pred HhC---CCChHHHHHHHHHHHHhCC--CChhhhhHHHHHHHH----hCcChHHHHHHHHHHHHhccCChhHHHHHHHHHH
Q 009766 116 SKG---HSSIDNELRLLDKFQKADS--RNFHAWNYRRFVAAS----MNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLS 186 (526)
Q Consensus 116 ~kl---~~~~eeELe~~dkaLeiDp--rNyhAW~yRr~lL~~----Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~ 186 (526)
... ..++++++.++.++++..+ .+..|+..-+.++.. .+.+ +++++++.++++. +.+..++++.+.++.
T Consensus 96 ~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~-~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 96 VNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDD-VKASEYFKGSSSL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp TCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCH-HHHHHHHHHHHHT-SCTTHHHHHHHHHHH
T ss_pred HcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 751 2479999999999999988 458999999998876 3334 6899999999998 777789888888875
Q ss_pred HhhhhhccCccchhhhHHHHHHHHHHHHHhCC
Q 009766 187 NLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDP 218 (526)
Q Consensus 187 ~L~~~~~~g~~~~~eileeELe~v~~AI~~dP 218 (526)
.-.. | ....-+++++.++.+++....
T Consensus 174 ~g~g----g--~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 174 QGEK----G--FIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp HCBT----T--TBCCCHHHHHHHHHHHHHHTC
T ss_pred cCCC----C--CCCCCHHHHHHHHHHHHHcCC
Confidence 4210 0 011226899999999998743
No 180
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.55 E-value=0.0012 Score=55.14 Aligned_cols=133 Identities=8% Similarity=-0.117 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 009766 60 TAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSY------GAWHHRKWILSKGHSSIDNELRLLDKFQ 133 (526)
Q Consensus 60 tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy------~AW~HRrwvL~kl~~~~eeELe~~dkaL 133 (526)
.+++..+.+....+ .+++++.++++++...++.. .++...+.+....+ .++++++++++++
T Consensus 10 ~~~~~l~~~~~~~~------------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 10 RAFGNLGNTHYLLG------------NFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLG-EFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc------------CHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHH
Confidence 46667777766665 58999999999998776544 47778888888774 8999999999999
Q ss_pred HhCCCC------hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCC------hhHHHHHHHHHHHhhhhhccCccchhh
Q 009766 134 KADSRN------FHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSN------YSAWHNRSLLLSNLLKRKVEGFVSKEK 201 (526)
Q Consensus 134 eiDprN------yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsN------ySAW~yR~~LL~~L~~~~~~g~~~~~e 201 (526)
++.+.. ..++...+.+....+.+ +++++++.+++...... ..++...+.+...++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~----------- 144 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDY-EKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGN----------- 144 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-----------
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccC-----------
Confidence 987654 56778888888888888 47999999999864332 2334444444444432
Q ss_pred hHHHHHHHHHHHHHhCC
Q 009766 202 VLPDEYEFVHQAIFTDP 218 (526)
Q Consensus 202 ileeELe~v~~AI~~dP 218 (526)
++++++++.+++.+..
T Consensus 145 -~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 145 -HDQAMHFAEKHLEISR 160 (164)
T ss_dssp -HHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 6889999998887643
No 181
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.47 E-value=0.0023 Score=63.04 Aligned_cols=157 Identities=11% Similarity=-0.099 Sum_probs=116.1
Q ss_pred hhcCCCcHHHHHHHHHHHHhCCCcHH-----HHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHH--
Q 009766 35 HHNHIYSKEAVELSTKLLETNPELYT-----AWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGA-- 107 (526)
Q Consensus 35 ~~~geyseEAL~lt~kaL~iNPd~yt-----AWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~A-- 107 (526)
...|++ ++++..+.++|...|.... +++..+.+....+ .+++++..+++++...|+.-..
T Consensus 25 ~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~~ 91 (373)
T 1hz4_A 25 INDGNP-DEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKG------------ELTRSLALMQQTEQMARQHDVWHY 91 (373)
T ss_dssp HHTTCH-HHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHCCCH-HHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcC------------cHHHHHHHHHHHHHHHHhcCcHHH
Confidence 367888 8999999999999887643 4566666666555 5899999999999876654332
Q ss_pred ----HHHHHHHHHhCCCChHHHHHHHHHHHHhCC--------CChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCC-
Q 009766 108 ----WHHRKWILSKGHSSIDNELRLLDKFQKADS--------RNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSN- 174 (526)
Q Consensus 108 ----W~HRrwvL~kl~~~~eeELe~~dkaLeiDp--------rNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsN- 174 (526)
..+.+.+.... +.+++++++++++++..+ ....++...+.++...|.++ ++++++.+++...+..
T Consensus 92 ~~~~~~~la~~~~~~-G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~al~~~~~~~ 169 (373)
T 1hz4_A 92 ALWSLIQQSEILFAQ-GFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLD-EAEASARSGIEVLSSYQ 169 (373)
T ss_dssp HHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHhhccC
Confidence 45566666666 489999999999998763 23345666788888888884 7999999999987653
Q ss_pred ----hhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCC
Q 009766 175 ----YSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDP 218 (526)
Q Consensus 175 ----ySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP 218 (526)
..++...+.+....++ ++++++.+.+++.+.+
T Consensus 170 ~~~~~~~~~~la~~~~~~g~------------~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 170 PQQQLQCLAMLIQCSLARGD------------LDNARSQLNRLENLLG 205 (373)
T ss_dssp GGGGHHHHHHHHHHHHHHTC------------HHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHHHHh
Confidence 2455566666555543 6889999999887643
No 182
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.45 E-value=0.0018 Score=53.99 Aligned_cols=124 Identities=8% Similarity=-0.080 Sum_probs=95.2
Q ss_pred HhhcCCCcHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC---
Q 009766 34 NHHNHIYSKEAVELSTKLLETNPELY------TAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS--- 104 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iNPd~y------tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs--- 104 (526)
....|++ ++|+..+.+++.+.++.. .+++..+.+....+ .+++++.++++++...++.
T Consensus 19 ~~~~~~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 19 HYLLGNF-RDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLG------------EFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHTTCH-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHhcCH-HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHHHhCCc
Confidence 3456888 899999999999877644 47777788777775 4899999999999876654
Q ss_pred ---hHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCC------hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhcc
Q 009766 105 ---YGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRN------FHAWNYRRFVAASMNRSEEDELKYTEDMICNNF 172 (526)
Q Consensus 105 ---y~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprN------yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nP 172 (526)
..++...+.+....+ .+++++++++++++..++. ..++...+.+....|.+ +++++++.++++...
T Consensus 86 ~~~~~~~~~l~~~~~~~~-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~-~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQ-DYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNH-DQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCH-HHHHHHHHHHHHHHH
Confidence 567788888888774 8999999999999874332 34556666777777877 478999998887643
No 183
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.44 E-value=0.0026 Score=66.01 Aligned_cols=167 Identities=10% Similarity=-0.060 Sum_probs=118.7
Q ss_pred CCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHh
Q 009766 38 HIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSK 117 (526)
Q Consensus 38 geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~k 117 (526)
+++ ++|+.++.+++.. .+..++...+.+...... .+...+++++.++++++.. .+..+|...+.++..
T Consensus 273 ~d~-~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~-------g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~ 340 (490)
T 2xm6_A 273 KEP-LKALEWYRKSAEQ--GNSDGQYYLAHLYDKGAE-------GVAKNREQAISWYTKSAEQ--GDATAQANLGAIYFR 340 (490)
T ss_dssp CCH-HHHHHHHHHHHTT--TCHHHHHHHHHHHHHCBT-------TBCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred CCH-HHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCC-------CCcCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHh
Confidence 444 6777777777654 456677777766655410 0113578889999998876 456788888888876
Q ss_pred CC--CChHHHHHHHHHHHHhCCCChhhhhHHHHHHHH----hCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhh
Q 009766 118 GH--SSIDNELRLLDKFQKADSRNFHAWNYRRFVAAS----MNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKR 191 (526)
Q Consensus 118 l~--~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~----Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~ 191 (526)
.+ ..++++++++.++++. .+..+|.+-+.+... .+.+ +++++++.++++.+ +..+|++.+.++..-.
T Consensus 341 ~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~-~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~-- 413 (490)
T 2xm6_A 341 LGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDE-QQAAIWMRKAAEQG--LSAAQVQLGEIYYYGL-- 413 (490)
T ss_dssp SCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH-HHHHHHHHHHHHTT--CHHHHHHHHHHHHHTS--
T ss_pred CCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHhCC--CHHHHHHHHHHHHcCC--
Confidence 52 1577899999999887 578899999888876 4444 57999999998764 6788888888876510
Q ss_pred hccCccchhhhHHHHHHHHHHHHHhCCC---CcccHHHHHH
Q 009766 192 KVEGFVSKEKVLPDEYEFVHQAIFTDPD---DQSGWFYHLW 229 (526)
Q Consensus 192 ~~~g~~~~~eileeELe~v~~AI~~dP~---DeSaW~Y~r~ 229 (526)
| ...-++++++.+.+|+..+|+ +..++.....
T Consensus 414 ---g---~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~~ 448 (490)
T 2xm6_A 414 ---G---VERDYVQAWAWFDTASTNDMNLFGTENRNITEKK 448 (490)
T ss_dssp ---S---SCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHTT
T ss_pred ---C---CCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHHh
Confidence 0 012269999999999999954 7777755433
No 184
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.43 E-value=0.0039 Score=65.14 Aligned_cols=162 Identities=9% Similarity=-0.028 Sum_probs=109.7
Q ss_pred HHHHHHhCCCcHHHHHH--HHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCC---CCh
Q 009766 48 STKLLETNPELYTAWNY--RKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGH---SSI 122 (526)
Q Consensus 48 t~kaL~iNPd~ytAWN~--Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~---~~~ 122 (526)
...+...-|++..||-+ |++-+.... + ...+.+++.+++++++++|.+..+|..+.++..... ..-
T Consensus 183 ~~r~~~~~p~~~~Aydl~Lra~~~l~~~-----~----~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~ 253 (372)
T 3ly7_A 183 QETLQKILPHRGALLTNFYQAHDYLLHG-----D----DKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLD 253 (372)
T ss_dssp HHHHHHHSCSSGGGHHHHHHHHHHHHHC-----S----HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHcC-----C----HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCc
Confidence 34566778888888885 444333322 1 246799999999999999999999998877664211 011
Q ss_pred HHHHHHHH------HHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCc
Q 009766 123 DNELRLLD------KFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGF 196 (526)
Q Consensus 123 eeELe~~d------kaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~ 196 (526)
...+.... ..+..+|.+..++.-.+.+.-..|.+ ++++...++++..||+ .-+|..+++++...++
T Consensus 254 ~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd~-d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~------ 325 (372)
T 3ly7_A 254 EKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKT-DESYQAINTGIDLEMS-WLNYVLLGKVYEMKGM------ 325 (372)
T ss_dssp HHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTC------
T ss_pred hhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCCH-HHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCC------
Confidence 11112111 22345666555444333344334666 5899999999999974 6677788888777664
Q ss_pred cchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHcc
Q 009766 197 VSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233 (526)
Q Consensus 197 ~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~ 233 (526)
.+++++.+.+|+.++|.++ .+++...+..+
T Consensus 326 ------~~eA~e~~~~AlrL~P~~~-t~~~~~~l~F~ 355 (372)
T 3ly7_A 326 ------NREAADAYLTAFNLRPGAN-TLYWIENGIFQ 355 (372)
T ss_dssp ------HHHHHHHHHHHHHHSCSHH-HHHHHHHSSSC
T ss_pred ------HHHHHHHHHHHHhcCCCcC-hHHHHhCceee
Confidence 6999999999999999987 56666666554
No 185
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.38 E-value=0.0011 Score=66.09 Aligned_cols=151 Identities=8% Similarity=-0.109 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCC------CChHHHHHHHHHHHhCCCChHHHHHHHHHHH
Q 009766 60 TAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNF------KSYGAWHHRKWILSKGHSSIDNELRLLDKFQ 133 (526)
Q Consensus 60 tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NP------Ksy~AW~HRrwvL~kl~~~~eeELe~~dkaL 133 (526)
-.|.+++......+ .+++++.++++++...+ ....+++..+.+....+ .++.++.++.+++
T Consensus 102 ~~~~~~g~~~~~~g------------~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~-~~~~A~~~~~~al 168 (378)
T 3q15_A 102 YSLFFRGMYEFDQK------------EYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMK-QTHVSMYHILQAL 168 (378)
T ss_dssp HHHHHHHHHHHHTT------------CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcC-CcHHHHHHHHHHH
Confidence 36667887776665 58999999999997633 34567777788888874 8999999999999
Q ss_pred HhCCCC-------hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccC--C----hhHHHHHHHHHHHhhhhhccCccchh
Q 009766 134 KADSRN-------FHAWNYRRFVAASMNRSEEDELKYTEDMICNNFS--N----YSAWHNRSLLLSNLLKRKVEGFVSKE 200 (526)
Q Consensus 134 eiDprN-------yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPs--N----ySAW~yR~~LL~~L~~~~~~g~~~~~ 200 (526)
++.+++ ..++...+.+...+|.+. ++++++.+++..... + ..++++.+.+...++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~-~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~---------- 237 (378)
T 3q15_A 169 DIYQNHPLYSIRTIQSLFVIAGNYDDFKHYD-KALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGD---------- 237 (378)
T ss_dssp HHHHTSTTCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC----------
T ss_pred HHHHhCCCchhhHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCC----------
Confidence 986543 346777888888888884 899999999986432 2 2467777777776654
Q ss_pred hhHHHHHHHHHHHHH-----hCCCCcccHHHHHHHHccccC
Q 009766 201 KVLPDEYEFVHQAIF-----TDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 201 eileeELe~v~~AI~-----~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
++++++++.+++. .+|....+++....++.....
T Consensus 238 --~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~ 276 (378)
T 3q15_A 238 --DQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQ 276 (378)
T ss_dssp --HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTC
T ss_pred --HHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCC
Confidence 7999999999998 788887777777777665433
No 186
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.32 E-value=0.00064 Score=68.47 Aligned_cols=132 Identities=11% Similarity=-0.092 Sum_probs=109.9
Q ss_pred HHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC--hHH
Q 009766 30 QFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS--YGA 107 (526)
Q Consensus 30 ~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs--y~A 107 (526)
+.......|+| ++|.++++.++..+|++. +...++.+..+.+ .+.+++..++.++...+.. ..+
T Consensus 108 yA~~L~~~g~y-~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~------------r~~dA~~~l~~a~~~~d~~~~~~a 173 (282)
T 4f3v_A 108 FAACEAAQGNY-ADAMEALEAAPVAGSEHL-VAWMKAVVYGAAE------------RWTDVIDQVKSAGKWPDKFLAGAA 173 (282)
T ss_dssp HHHHHHHHTCH-HHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTT------------CHHHHHHHHTTGGGCSCHHHHHHH
T ss_pred HHHHHHHCCCH-HHHHHHHHHHHhcCCchH-HHHHHHHHHHHcC------------CHHHHHHHHHHhhccCCcccHHHH
Confidence 34455678899 899999999999999999 8888998877775 5899999999887643222 348
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHhC--CC-ChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHH
Q 009766 108 WHHRKWILSKGHSSIDNELRLLDKFQKAD--SR-NFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAW 178 (526)
Q Consensus 108 W~HRrwvL~kl~~~~eeELe~~dkaLeiD--pr-NyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW 178 (526)
+.+.+.++..++ .+++++.++++++.-. |. ...++.+++.++..+|.. +++.+.+.+++..+|. .-+|
T Consensus 174 ~~~LG~al~~LG-~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~-deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 174 GVAHGVAAANLA-LFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNE-SAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp HHHHHHHHHHTT-CHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHHHHHHHCC-CHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH-HHHHHHHHHHHhcCCc-HHHH
Confidence 999999999995 9999999999998644 55 556999999999999998 4899999999999998 5544
No 187
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.27 E-value=0.012 Score=60.92 Aligned_cols=167 Identities=10% Similarity=-0.053 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhC---
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKG--- 118 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl--- 118 (526)
++|+.++.+++.. .+..++...+.+...... ...++.+++.++++++.. .+..+++..+.++...
T Consensus 240 ~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~~--------~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~g 307 (490)
T 2xm6_A 240 TQSRVLFSQSAEQ--GNSIAQFRLGYILEQGLA--------GAKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDKGAEG 307 (490)
T ss_dssp HHHHHHHHHHHTT--TCHHHHHHHHHHHHHTTT--------SSCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHCBTT
T ss_pred HHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCC--------CCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCC
Confidence 4555555555543 334555555555443210 023578888888888765 5677888888887765
Q ss_pred -CCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCc--ChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccC
Q 009766 119 -HSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNR--SEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEG 195 (526)
Q Consensus 119 -~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~--~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g 195 (526)
..++++++.++.++++. .+..+|...+.+....+. ..+++++++.++++. .|..+|++.+.++..-. +
T Consensus 308 ~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~-----g 378 (490)
T 2xm6_A 308 VAKNREQAISWYTKSAEQ--GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGK-----G 378 (490)
T ss_dssp BCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTS-----S
T ss_pred CcCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCC-----C
Confidence 13788899999998876 456788888888776542 125788888998876 67888988888876510 0
Q ss_pred ccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccc
Q 009766 196 FVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQT 234 (526)
Q Consensus 196 ~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~ 234 (526)
...-++++++++.+++.. ++..+|+.+..++...
T Consensus 379 ---~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g 412 (490)
T 2xm6_A 379 ---VKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYG 412 (490)
T ss_dssp ---SCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHT
T ss_pred ---CCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcC
Confidence 112268999999999985 4688898888888663
No 188
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.22 E-value=0.0075 Score=62.87 Aligned_cols=162 Identities=12% Similarity=0.051 Sum_probs=113.1
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCC---C
Q 009766 44 AVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGH---S 120 (526)
Q Consensus 44 AL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~---~ 120 (526)
+..++..+...+|+ +++..+.++...+. ...+.+++.++.+++..+|....+++.-+.++.... .
T Consensus 164 a~~~~~~a~~~~~~---a~~~Lg~~~~~~g~---------~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~ 231 (452)
T 3e4b_A 164 VERICKAALNTTDI---CYVELATVYQKKQQ---------PEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTP 231 (452)
T ss_dssp HHHHHHHHTTTCTT---HHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSC
T ss_pred HHHHHHHHHcCCHH---HHHHHHHHHHHcCC---------cccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCC
Confidence 44455555555555 77777777766542 246788888999999888888888877777775431 3
Q ss_pred ChHHHHHHHHHHHHhCCCChhhhhHHHHH-H--HHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCcc
Q 009766 121 SIDNELRLLDKFQKADSRNFHAWNYRRFV-A--ASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFV 197 (526)
Q Consensus 121 ~~eeELe~~dkaLeiDprNyhAW~yRr~l-L--~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~ 197 (526)
++++++.++.+++ |.+..++...+.+ + ...+.+ +++++++.++++. .+..|+++.+.++.. +. +
T Consensus 232 d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~-~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~~-G~----g-- 298 (452)
T 3e4b_A 232 DEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDV-EQMMKYLDNGRAA--DQPRAELLLGKLYYE-GK----W-- 298 (452)
T ss_dssp CHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCH-HHHHHHHHHHHHT--TCHHHHHHHHHHHHH-CS----S--
T ss_pred CHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHHHC--CCHHHHHHHHHHHHc-CC----C--
Confidence 6788888888887 8888888888887 4 233444 5788888888854 477888888877652 21 1
Q ss_pred chhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccc
Q 009766 198 SKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQT 234 (526)
Q Consensus 198 ~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~ 234 (526)
...-+.++++++.+++ |++..+++.+..++...
T Consensus 299 -~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G 331 (452)
T 3e4b_A 299 -VPADAKAAEAHFEKAV---GREVAADYYLGQIYRRG 331 (452)
T ss_dssp -SCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTT
T ss_pred -CCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCC
Confidence 1112577888888877 78888887777776553
No 189
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.21 E-value=0.009 Score=62.25 Aligned_cols=170 Identities=9% Similarity=-0.084 Sum_probs=133.9
Q ss_pred CCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHH--
Q 009766 39 IYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS-- 116 (526)
Q Consensus 39 eyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~-- 116 (526)
++ ++|+..+.+++..+|....+++.-+.++..... +..++.+++.+++++. |.+..+++..+.++.
T Consensus 194 ~~-~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~--------~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~ 261 (452)
T 3e4b_A 194 QQ-AELLKQMEAGVSRGTVTAQRVDSVARVLGDATL--------GTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDF 261 (452)
T ss_dssp HH-HHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGG--------SSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHS
T ss_pred cH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC--------CCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhC
Confidence 56 899999999999999999999988888755421 1236899999999998 999999999999843
Q ss_pred hCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhC----cChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhh
Q 009766 117 KGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMN----RSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRK 192 (526)
Q Consensus 117 kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg----~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~ 192 (526)
....++++++.++.++++.. +..|+...+.++. .| ...+++++++.+++ +.+..|+++.+.++.. +.
T Consensus 262 ~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~-G~-- 332 (452)
T 3e4b_A 262 PELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRR-GY-- 332 (452)
T ss_dssp GGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHT-TT--
T ss_pred CCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHC-CC--
Confidence 22358999999999998654 8899999998887 33 12368999999999 9999999999987664 21
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccccC
Q 009766 193 VEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQTVR 236 (526)
Q Consensus 193 ~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~~~ 236 (526)
+ ...-+++++.++.++.. +++..+.+.+..++....+
T Consensus 333 --g---~~~d~~~A~~~~~~Aa~--~g~~~A~~~Lg~~y~~G~g 369 (452)
T 3e4b_A 333 --L---GKVYPQKALDHLLTAAR--NGQNSADFAIAQLFSQGKG 369 (452)
T ss_dssp --T---SSCCHHHHHHHHHHHHT--TTCTTHHHHHHHHHHSCTT
T ss_pred --C---CCcCHHHHHHHHHHHHh--hChHHHHHHHHHHHHhCCC
Confidence 1 11226899999999986 6778888777777765433
No 190
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.11 E-value=0.0028 Score=66.22 Aligned_cols=129 Identities=9% Similarity=0.026 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCC
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSS 121 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~ 121 (526)
.+|+.+++++|.++|++..+|-.+..+...+...... +......+.+++.-. .++..+|.+..++.--..++... +.
T Consensus 216 ~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~-~~~~~~~l~~a~~a~-~a~~~~~~~a~~~~alal~~l~~-gd 292 (372)
T 3ly7_A 216 NRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPL-DEKQLAALNTEIDNI-VTLPELNNLSIIYQIKAVSALVK-GK 292 (372)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHH-HTCGGGTTCHHHHHHHHHHHHHH-TC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCC-chhhHHHHHHHHHHH-HhcccCCcCHHHHHHHHHHHHhC-CC
Confidence 7899999999999999999999877765533221111 111112233444421 34466777777665443333322 48
Q ss_pred hHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCCh
Q 009766 122 IDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175 (526)
Q Consensus 122 ~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNy 175 (526)
+++++..+++++.++| |..+|...+++....|.+ +++++.+.+++..+|+..
T Consensus 293 ~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~-~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 293 TDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMN-REAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCH-HHHHHHHHHHHhcCCCcC
Confidence 9999999999999996 678888999999999999 489999999999999985
No 191
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.10 E-value=0.0041 Score=54.94 Aligned_cols=131 Identities=7% Similarity=-0.190 Sum_probs=98.5
Q ss_pred HHHhhcCCCcHHHHHHHHHHHH------hCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh---CC
Q 009766 32 LHNHHNHIYSKEAVELSTKLLE------TNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ---NF 102 (526)
Q Consensus 32 ~~~~~~geyseEAL~lt~kaL~------iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~---NP 102 (526)
......|++ ++|+..+.+++. ..|....+++..+.+....+ .+++++..+++++.. .+
T Consensus 34 ~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g------------~~~~A~~~~~~al~~~~~~~ 100 (203)
T 3gw4_A 34 YVYAFMDRF-DEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG------------NWDAARRCFLEERELLASLP 100 (203)
T ss_dssp HHHHHTTCH-HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHhCcH-HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHHHcC
Confidence 344567888 899999999999 56667788888888888876 489999999999987 33
Q ss_pred ----CChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCCh------hhhhHHHHHHHHhCcChHHHHHHHHHHHHhcc
Q 009766 103 ----KSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNF------HAWNYRRFVAASMNRSEEDELKYTEDMICNNF 172 (526)
Q Consensus 103 ----Ksy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNy------hAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nP 172 (526)
....++...+.+....+ .+++++.++++++++.+... .++...+.+....|.+ +++++++.+++....
T Consensus 101 ~~~~~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~-~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 101 EDPLAASANAYEVATVALHFG-DLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNL-LEAQQHWLRARDIFA 178 (203)
T ss_dssp CCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCH-HHHHHHHHHHHHHHH
Confidence 33456777788887774 89999999999997643322 2245667777778887 478999999888654
Q ss_pred CChhH
Q 009766 173 SNYSA 177 (526)
Q Consensus 173 sNySA 177 (526)
.....
T Consensus 179 ~~~~~ 183 (203)
T 3gw4_A 179 ELEDS 183 (203)
T ss_dssp HTTCH
T ss_pred HcCCH
Confidence 44333
No 192
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=96.75 E-value=0.042 Score=53.89 Aligned_cols=160 Identities=7% Similarity=-0.100 Sum_probs=110.3
Q ss_pred HhhcCCCcHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhC------
Q 009766 34 NHHNHIYSKEAVELSTKLLETNPELY------TAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQN------ 101 (526)
Q Consensus 34 ~~~~geyseEAL~lt~kaL~iNPd~y------tAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~N------ 101 (526)
....|++ ++|+..+.+++.+.|+.- .+.+..+.+....+ .+.+++..++.++...
T Consensus 63 ~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G------------~~~~A~~~~~~al~~~~~~~~~ 129 (373)
T 1hz4_A 63 LHCKGEL-TRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQG------------FLQTAWETQEKAFQLINEQHLE 129 (373)
T ss_dssp HHHHTCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHhcCcH-HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHHHHHhccc
Confidence 3456888 899999999999876543 22455666666655 5899999999999765
Q ss_pred --CCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCC-----hhhhhHHHHHHHHhCcChHHHHHHHHHHHHhcc--
Q 009766 102 --FKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRN-----FHAWNYRRFVAASMNRSEEDELKYTEDMICNNF-- 172 (526)
Q Consensus 102 --PKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprN-----yhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nP-- 172 (526)
|....++...+.++...+ .++++..++++++++.++. ..++...+.+....|.+ +++++++++++...+
T Consensus 130 ~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~-~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 130 QLPMHEFLVRIRAQLLWAWA-RLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDL-DNARSQLNRLENLLGNG 207 (373)
T ss_dssp TSTHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHTTS
T ss_pred cCcHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhcc
Confidence 334456667788877774 8999999999999988763 24566777777778888 479999999988643
Q ss_pred CChhHHHHH---H--HHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCC
Q 009766 173 SNYSAWHNR---S--LLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220 (526)
Q Consensus 173 sNySAW~yR---~--~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~D 220 (526)
.+...|... . .+....+ -++++...+.+++...|.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~g------------~~~~A~~~~~~a~~~~~~~ 248 (373)
T 1hz4_A 208 KYHSDWISNANKVRVIYWQMTG------------DKAAAANWLRHTAKPEFAN 248 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHSCCCCCTT
T ss_pred CcchhHHHHHHHHHHHHHHHCC------------CHHHHHHHHHhCCCCCCCc
Confidence 232334322 1 1122222 2577777777777666653
No 193
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.69 E-value=0.028 Score=62.75 Aligned_cols=165 Identities=6% Similarity=-0.143 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHH-HHHHHHHHhCCCChHHHHHHHHHHHhCCC
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEEL-RVVESALRQNFKSYGAWHHRKWILSKGHS 120 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL-~~~e~aL~~NPKsy~AW~HRrwvL~kl~~ 120 (526)
.+...+|+++|..+|.++.+|..-...+...+. ..+++ .++++++..+|++...|..-.-+....+
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~------------~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~- 392 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNT------------DSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNT- 392 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSC------------CTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCc------------HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhC-
Confidence 346678999999999999999988877776652 35676 8999999999999999987777777664
Q ss_pred ChHHHHHHHHHHHHhC-----------CC-----------ChhhhhHHHHHHHHhCcChHHHHHHHHHHHHh-ccCChhH
Q 009766 121 SIDNELRLLDKFQKAD-----------SR-----------NFHAWNYRRFVAASMNRSEEDELKYTEDMICN-NFSNYSA 177 (526)
Q Consensus 121 ~~eeELe~~dkaLeiD-----------pr-----------NyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~-nPsNySA 177 (526)
.++++-+.++++++.- |. +-.+|-.-.-+..+.+.. +.+-+.+.+++.. .+.....
T Consensus 393 ~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l-~~AR~vf~~A~~~~~~~~~~l 471 (679)
T 4e6h_A 393 KIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGL-AASRKIFGKCRRLKKLVTPDI 471 (679)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHTGGGSCTHH
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhcCCCChHH
Confidence 7888899999988752 43 223677766665555544 4677778888877 4455666
Q ss_pred HHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccH-HHHHHHH
Q 009766 178 WHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGW-FYHLWLL 231 (526)
Q Consensus 178 W~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW-~Y~r~LL 231 (526)
|.....+-..++. -++.+...+..++...|++...| .|..++.
T Consensus 472 yi~~A~lE~~~~~-----------d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~ 515 (679)
T 4e6h_A 472 YLENAYIEYHISK-----------DTKTACKVLELGLKYFATDGEYINKYLDFLI 515 (679)
T ss_dssp HHHHHHHHHTTTS-----------CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-----------CHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 6544443333221 03677778888888888888888 4655544
No 194
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.50 E-value=0.085 Score=63.65 Aligned_cols=170 Identities=8% Similarity=0.025 Sum_probs=111.8
Q ss_pred HHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCC--------
Q 009766 32 LHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFK-------- 103 (526)
Q Consensus 32 ~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPK-------- 103 (526)
.+....|.+ ++|++.|.++ +++.+|.....++.+++. ++++++++..+.+..+.
T Consensus 1113 KAql~~G~~-kEAIdsYiKA-----dD~say~eVa~~~~~lGk------------yEEAIeyL~mArk~~~e~~Idt~La 1174 (1630)
T 1xi4_A 1113 KAQLQKGMV-KEAIDSYIKA-----DDPSSYMEVVQAANTSGN------------WEELVKYLQMARKKARESYVETELI 1174 (1630)
T ss_pred HHHHhCCCH-HHHHHHHHhc-----CChHHHHHHHHHHHHcCC------------HHHHHHHHHHHHhhcccccccHHHH
Confidence 344456777 7888888664 788888888888877763 56666666555544422
Q ss_pred -------------------ChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHH
Q 009766 104 -------------------SYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYT 164 (526)
Q Consensus 104 -------------------sy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~t 164 (526)
+...|..-+-.+... +.|++++.+|.++ ..|...+.++-++|.+ +++++++
T Consensus 1175 faYAKl~rleele~fI~~~n~ad~~~iGd~le~e-g~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~-q~AIEaa 1244 (1630)
T 1xi4_A 1175 FALAKTNRLAELEEFINGPNNAHIQQVGDRCYDE-KMYDAAKLLYNNV--------SNFGRLASTLVHLGEY-QAAVDGA 1244 (1630)
T ss_pred HHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhc-CCHHHHHHHHHhh--------hHHHHHHHHHHHhCCH-HHHHHHH
Confidence 233454444444444 3677888888875 4777778888888887 4788888
Q ss_pred HHHHHhccCChhHHHHHHHHHHHhhhhh---ccC---------c------cchhhhHHHHHHHHHHHHHhCCCCcccHHH
Q 009766 165 EDMICNNFSNYSAWHNRSLLLSNLLKRK---VEG---------F------VSKEKVLPDEYEFVHQAIFTDPDDQSGWFY 226 (526)
Q Consensus 165 dkaI~~nPsNySAW~yR~~LL~~L~~~~---~~g---------~------~~~~eileeELe~v~~AI~~dP~DeSaW~Y 226 (526)
.++ .|..+|..-.+..-..+... .-+ . -.....++++|.++.+++.++|.+...|..
T Consensus 1245 rKA-----~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftE 1319 (1630)
T 1xi4_A 1245 RKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE 1319 (1630)
T ss_pred HHh-----CCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHH
Confidence 887 56688875544431111100 000 0 011234799999999999999999999988
Q ss_pred HHHHHccc
Q 009766 227 HLWLLDQT 234 (526)
Q Consensus 227 ~r~LL~~~ 234 (526)
+.-|+.+.
T Consensus 1320 LaiLyaKy 1327 (1630)
T 1xi4_A 1320 LAILYSKF 1327 (1630)
T ss_pred HHHHHHhC
Confidence 88887663
No 195
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.39 E-value=0.074 Score=64.13 Aligned_cols=139 Identities=13% Similarity=0.023 Sum_probs=90.2
Q ss_pred CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q 009766 56 PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKA 135 (526)
Q Consensus 56 Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLei 135 (526)
.+...+|...+.++...+ .+++++++|.++ +++.+|.....++.+++ .++++++++..+.+.
T Consensus 1102 vn~p~vWsqLAKAql~~G------------~~kEAIdsYiKA-----dD~say~eVa~~~~~lG-kyEEAIeyL~mArk~ 1163 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKG------------MVKEAIDSYIKA-----DDPSSYMEVVQAANTSG-NWEELVKYLQMARKK 1163 (1630)
T ss_pred cCCHHHHHHHHHHHHhCC------------CHHHHHHHHHhc-----CChHHHHHHHHHHHHcC-CHHHHHHHHHHHHhh
Confidence 466788888888887776 488999998765 88888888888888884 889999999888877
Q ss_pred CCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccC-------c-------cchhh
Q 009766 136 DSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEG-------F-------VSKEK 201 (526)
Q Consensus 136 DprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g-------~-------~~~~e 201 (526)
++. ..+=...++++.+++++ ++++.+ | +..|...|...+..+...+.+.+.. . -...+
T Consensus 1164 ~~e-~~Idt~LafaYAKl~rl--eele~f---I--~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA~ny~rLA~tLvkLg 1235 (1630)
T 1xi4_A 1164 ARE-SYVETELIFALAKTNRL--AELEEF---I--NGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLG 1235 (1630)
T ss_pred ccc-ccccHHHHHHHHhhcCH--HHHHHH---H--hCCCHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHHHHHhC
Confidence 733 22223467777777665 245543 2 3345566666666666655432110 0 00111
Q ss_pred hHHHHHHHHHHHHHhCCCCcccHH
Q 009766 202 VLPDEYEFVHQAIFTDPDDQSGWF 225 (526)
Q Consensus 202 ileeELe~v~~AI~~dP~DeSaW~ 225 (526)
-++++++++.+| ++..+|.
T Consensus 1236 e~q~AIEaarKA-----~n~~aWk 1254 (1630)
T 1xi4_A 1236 EYQAAVDGARKA-----NSTRTWK 1254 (1630)
T ss_pred CHHHHHHHHHHh-----CCHHHHH
Confidence 257777777776 4556775
No 196
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.21 E-value=0.021 Score=47.39 Aligned_cols=74 Identities=11% Similarity=-0.038 Sum_probs=56.7
Q ss_pred CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 009766 55 NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQK 134 (526)
Q Consensus 55 NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLe 134 (526)
+|++..+|..++.++..... . ....++...++++|..+|++..++...+.+..+.+ .|++++.++.++++
T Consensus 2 ~p~~~~~~~~~a~al~~~~~--~-------~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g-~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHK--Q-------AMTDEVSLLLEQALQLEPYNEAALSLIANDHFISF-RFQEAIDTWVLLLD 71 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTT--T-------CCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhcC--C-------CCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHh
Confidence 68888888888888754331 0 12467788888888888888888888888877764 88888888888888
Q ss_pred hCCC
Q 009766 135 ADSR 138 (526)
Q Consensus 135 iDpr 138 (526)
.+|.
T Consensus 72 ~~p~ 75 (93)
T 3bee_A 72 SNDP 75 (93)
T ss_dssp CCCT
T ss_pred hCCC
Confidence 8887
No 197
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.059 Score=53.63 Aligned_cols=162 Identities=11% Similarity=-0.007 Sum_probs=109.3
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHH
Q 009766 33 HNHHNHIYSKEAVELSTKLLETNPELYT-----------------AWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVE 95 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iNPd~yt-----------------AWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e 95 (526)
....+|+| ++|++.+.+++..+|+... +....+.+....+ .++++++++.
T Consensus 13 ~l~~~~~y-~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~------------~~~~a~~~~~ 79 (434)
T 4b4t_Q 13 RLVNEKQY-NEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMG------------AKDKLREFIP 79 (434)
T ss_dssp HHHHHTCH-HHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHT------------CHHHHHHHHH
T ss_pred HHHHCCCH-HHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCC------------CHHHHHHHHH
Confidence 34567899 8999999999999998653 4555666666655 5899999999
Q ss_pred HHHHhCCCChHHHHHHH--HHHH---hCCCChHHHHHHHHHHHHhCCCCh------hhhhHHHHHHHHhCcChHHHHHHH
Q 009766 96 SALRQNFKSYGAWHHRK--WILS---KGHSSIDNELRLLDKFQKADSRNF------HAWNYRRFVAASMNRSEEDELKYT 164 (526)
Q Consensus 96 ~aL~~NPKsy~AW~HRr--wvL~---kl~~~~eeELe~~dkaLeiDprNy------hAW~yRr~lL~~Lg~~~eeELe~t 164 (526)
.++...++...+-..+. -++. ...+.++.++.++.+++...+.+. .++...+.+....|.+ .++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~-~~A~~~l 158 (434)
T 4b4t_Q 80 HSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQY-KDSLALI 158 (434)
T ss_dssp HTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCH-HHHHHHH
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccCh-HHHHHHH
Confidence 99987666544432221 1111 122578999999999988654432 3555566667777887 4788888
Q ss_pred HHHHHhc------cCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCC
Q 009766 165 EDMICNN------FSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220 (526)
Q Consensus 165 dkaI~~n------PsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~D 220 (526)
.+++..- +....++...+.+...++. +.++..++++++...+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 159 NDLLREFKKLDDKPSLVDVHLLESKVYHKLRN------------LAKSKASLTAARTAANSI 208 (434)
T ss_dssp HHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhcccchhHHHHHHHHHHHHHHhCc------------HHHHHHHHHHHHHHhhcC
Confidence 8887752 2223456666666655543 688888888888765443
No 198
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.11 E-value=0.064 Score=54.58 Aligned_cols=157 Identities=6% Similarity=-0.067 Sum_probs=114.9
Q ss_pred hcCCCcHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCC------CChHH
Q 009766 36 HNHIYSKEAVELSTKLLETNP--ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNF------KSYGA 107 (526)
Q Consensus 36 ~~geyseEAL~lt~kaL~iNP--d~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NP------Ksy~A 107 (526)
..|++ ++||.++.+.|..+| .+..+....-.++..++ +.+.+.+.++.+...+| .....
T Consensus 112 ~~g~~-eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~------------r~d~A~k~l~~~~~~~~d~~~~~d~~l~ 178 (310)
T 3mv2_B 112 ILGDL-DKSLETCVEGIDNDEAEGTTELLLLAIEVALLNN------------NVSTASTIFDNYTNAIEDTVSGDNEMIL 178 (310)
T ss_dssp HHTCH-HHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HcCCH-HHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHhcCccccccchHHHH
Confidence 45888 899999999999997 88888888888888886 47899999999999999 34444
Q ss_pred HHHHHHHHHh-CCCChHHHHHHHHHHHHhCCC--Ch-hhhhHHHHHHHHhCcChHHHHHHHHHHHHh----------ccC
Q 009766 108 WHHRKWILSK-GHSSIDNELRLLDKFQKADSR--NF-HAWNYRRFVAASMNRSEEDELKYTEDMICN----------NFS 173 (526)
Q Consensus 108 W~HRrwvL~k-l~~~~eeELe~~dkaLeiDpr--Ny-hAW~yRr~lL~~Lg~~~eeELe~tdkaI~~----------nPs 173 (526)
..--.|+--. .+..+.+++.+|+.+++..|. +. ..|+ +...+|.++ ++-+..+.+++. +|.
T Consensus 179 ~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln----~~~~~g~~~-eAe~~L~~l~~~~p~~~~k~~~~p~ 253 (310)
T 3mv2_B 179 NLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN----LHLQQRNIA-EAQGIVELLLSDYYSVEQKENAVLY 253 (310)
T ss_dssp HHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH----HHHHHTCHH-HHHHHHHHHHSHHHHTTTCHHHHSS
T ss_pred HHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH----HHHHcCCHH-HHHHHHHHHHHhcccccccccCCCC
Confidence 4434555543 224789999999999888875 22 2233 566778874 566666666665 588
Q ss_pred ChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccH
Q 009766 174 NYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGW 224 (526)
Q Consensus 174 NySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW 224 (526)
|..+..+...+-..+++ ++.+++.++...+|+|+-.=
T Consensus 254 ~~~~LaN~i~l~~~lgk--------------~a~~l~~qL~~~~P~hp~i~ 290 (310)
T 3mv2_B 254 KPTFLANQITLALMQGL--------------DTEDLTNQLVKLDHEHAFIK 290 (310)
T ss_dssp HHHHHHHHHHHHHHTTC--------------TTHHHHHHHHHTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHhCh--------------HHHHHHHHHHHhCCCChHHH
Confidence 88887777666555542 44577888999999998443
No 199
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=95.83 E-value=0.11 Score=47.80 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHhCC--CChHHHHHHHHHHHHhC-C-CChhhhhHHHHHHHHhCcChHHHHHH
Q 009766 88 DEELRVVESALRQNFKSYGAWHHRKWILSKGH--SSIDNELRLLDKFQKAD-S-RNFHAWNYRRFVAASMNRSEEDELKY 163 (526)
Q Consensus 88 ~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~--~~~eeELe~~dkaLeiD-p-rNyhAW~yRr~lL~~Lg~~~eeELe~ 163 (526)
...-+-+...+..+|.+.++...-.|+|-+.. ...++.+.+++.+++.+ | ++-.+++|.+...-+++.+. +++++
T Consensus 15 ~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~-~A~~y 93 (152)
T 1pc2_A 15 LKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE-KALKY 93 (152)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHH-HHHHH
T ss_pred HHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHH-HHHHH
Confidence 34444555556667777777777777777653 13457777777777777 6 56677777777777777774 67777
Q ss_pred HHHHHHhccCChhHHHHHHHHHHHhhh
Q 009766 164 TEDMICNNFSNYSAWHNRSLLLSNLLK 190 (526)
Q Consensus 164 tdkaI~~nPsNySAW~yR~~LL~~L~~ 190 (526)
++++++++|.|..|-.-+..+-..+.+
T Consensus 94 ~~~lL~ieP~n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 94 VRGLLQTEPQNNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 777777777777777777666666554
No 200
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.76 E-value=0.095 Score=43.33 Aligned_cols=64 Identities=16% Similarity=0.042 Sum_probs=55.4
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC
Q 009766 29 SQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS 104 (526)
Q Consensus 29 ~~~~~~~~~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs 104 (526)
+..+-....|..++++..++.++|.++|++..++...+.+....+ .|++++..+++++..+|.+
T Consensus 13 a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g------------~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 13 ATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISF------------RFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHhhCCCC
Confidence 344444456777899999999999999999999999999988876 5999999999999999993
No 201
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.67 E-value=0.29 Score=54.63 Aligned_cols=164 Identities=5% Similarity=-0.080 Sum_probs=114.4
Q ss_pred cCCCcHHHH-HHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh-----------CCC-
Q 009766 37 NHIYSKEAV-ELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ-----------NFK- 103 (526)
Q Consensus 37 ~geyseEAL-~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~-----------NPK- 103 (526)
.|.. ++|. +++..++..+|++...|..-..+....+ .++++..++++++.. .|.
T Consensus 356 ~~~~-~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~------------~~e~aR~iyek~l~~l~~~~~~~~~~~p~~ 422 (679)
T 4e6h_A 356 KNTD-STVITKYLKLGQQCIPNSAVLAFSLSEQYELNT------------KIPEIETTILSCIDRIHLDLAALMEDDPTN 422 (679)
T ss_dssp HSCC-TTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred cCcH-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhC------------CHHHHHHHHHHHHHHHHHHhhhhhhccCcc
Confidence 4555 5787 9999999999999999988777777665 356666777777653 353
Q ss_pred ----------ChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhcc
Q 009766 104 ----------SYGAWHHRKWILSKGHSSIDNELRLLDKFQKA-DSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNF 172 (526)
Q Consensus 104 ----------sy~AW~HRrwvL~kl~~~~eeELe~~dkaLei-DprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nP 172 (526)
+..+|..-.-+..+.+ ..+.+.+.+.++++. .+...+.|..-+.+-...+.-.+.+...++++++..|
T Consensus 423 ~~~~~~~~~~~~~vWi~y~~~erR~~-~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p 501 (679)
T 4e6h_A 423 ESAINQLKSKLTYVYCVYMNTMKRIQ-GLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFA 501 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHT
T ss_pred hhhhhhhccchHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCC
Confidence 3457887766666553 678999999999988 5556778776655554555422578899999999999
Q ss_pred CChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCC---CcccHHH
Q 009766 173 SNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPD---DQSGWFY 226 (526)
Q Consensus 173 sNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~---DeSaW~Y 226 (526)
.+...|.--.-++..++. .+.+-..+.+|+...|+ ....|..
T Consensus 502 ~~~~~w~~y~~fe~~~~~------------~~~AR~lferal~~~~~~~~~~~lw~~ 546 (679)
T 4e6h_A 502 TDGEYINKYLDFLIYVNE------------ESQVKSLFESSIDKISDSHLLKMIFQK 546 (679)
T ss_dssp TCHHHHHHHHHHHHHHTC------------HHHHHHHHHHHTTTSSSTTHHHHHHHH
T ss_pred CchHHHHHHHHHHHhCCC------------HHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 999988332223333322 36666777788877773 4455643
No 202
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=95.51 E-value=0.13 Score=47.27 Aligned_cols=65 Identities=9% Similarity=0.074 Sum_probs=55.8
Q ss_pred hhHHHHHHHHHHHHHhC-C-CChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHH
Q 009766 85 SILDEELRVVESALRQN-F-KSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVA 150 (526)
Q Consensus 85 ~~~~eEL~~~e~aL~~N-P-Ksy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL 150 (526)
..+++.+.+++.+++.+ | ++-.++++.....-+++ .|++++.+++++|+++|.|-.|-.=+.-+-
T Consensus 49 ~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~-~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 49 DDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLK-EYEKALKYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTS-CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHcc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 46789999999999999 7 67889999988888885 999999999999999999999966554443
No 203
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=95.35 E-value=0.38 Score=48.89 Aligned_cols=125 Identities=5% Similarity=-0.059 Sum_probs=96.2
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHhC----CCC
Q 009766 48 STKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFK--SYGAWHHRKWILSKG----HSS 121 (526)
Q Consensus 48 t~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPK--sy~AW~HRrwvL~kl----~~~ 121 (526)
-..+-..+|++..++.+.+.+....-.....++..+ ..+.++....+++++++|+ +-.+|...+.+..+. .+.
T Consensus 141 ~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al-~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd 219 (301)
T 3u64_A 141 HKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALP-DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGG 219 (301)
T ss_dssp HHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCH-HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCC
T ss_pred HHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHH-HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCC
Confidence 344556899999999999988877532112233332 5678999999999999999 555999999998885 257
Q ss_pred hHHHHHHHHHHHHhCCC-ChhhhhHHHHHHHH-hCcChHHHHHHHHHHHHhccCC
Q 009766 122 IDNELRLLDKFQKADSR-NFHAWNYRRFVAAS-MNRSEEDELKYTEDMICNNFSN 174 (526)
Q Consensus 122 ~eeELe~~dkaLeiDpr-NyhAW~yRr~lL~~-Lg~~~eeELe~tdkaI~~nPsN 174 (526)
.+++-++++++|+++|. |..+..+-+..+.. .+.+ ++..++.++++..+|+.
T Consensus 220 ~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~-~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 220 MEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNR-AGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCH-HHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCH-HHHHHHHHHHHcCCCCC
Confidence 89999999999999996 48887777666554 3555 46788999999988874
No 204
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.73 E-value=0.22 Score=52.46 Aligned_cols=102 Identities=11% Similarity=0.014 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHH
Q 009766 23 KLRVLQSQFLHNHHNHIYSKEAVELSTKLLET--------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVV 94 (526)
Q Consensus 23 k~r~l~~~~~~~~~~geyseEAL~lt~kaL~i--------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~ 94 (526)
.-+..+..+......|+| ++|+.++.++|.+ +|+.....+.-+.+...++ .|++++.++
T Consensus 297 ~~~~~le~~~~~~~~g~~-~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g------------~~~eA~~~~ 363 (433)
T 3qww_A 297 YARNVIEEFRRAKHYKSP-SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQ------------DWEGALKYG 363 (433)
T ss_dssp HHHHHHHHHHHHTTTSCH-HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTT------------CHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCH-HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhc------------CHHHHHHHH
Confidence 344556667777778999 8999999999985 4444577778888887776 488888888
Q ss_pred HHHHHh--------CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCC
Q 009766 95 ESALRQ--------NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSR 138 (526)
Q Consensus 95 e~aL~~--------NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDpr 138 (526)
+++|.+ +|.-....+.-+.++... +.+++++.++.+++++..+
T Consensus 364 ~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~q-g~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 364 QKIIKPYSKHYPVYSLNVASMWLKLGRLYMGL-ENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCChHHHHHHHHHHHHHHhc-cCHHHHHHHHHHHHHHHHH
Confidence 888854 555666777777887777 4899999999999987543
No 205
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=94.66 E-value=0.7 Score=39.86 Aligned_cols=117 Identities=9% Similarity=-0.077 Sum_probs=87.6
Q ss_pred hhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHH----hCcChH
Q 009766 83 LKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAAS----MNRSEE 158 (526)
Q Consensus 83 ~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~----Lg~~~e 158 (526)
+..++.+++.+++++...+..... .+.++... ..++++++++.++++. .+..|+..-+.++.. ... .+
T Consensus 7 ~~~d~~~A~~~~~~aa~~g~~~a~----lg~~y~~g-~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d-~~ 78 (138)
T 1klx_A 7 VKKDLKKAIQYYVKACELNEMFGC----LSLVSNSQ-INKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKD-LR 78 (138)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTHH----HHHHTCTT-SCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCC-HH
T ss_pred CccCHHHHHHHHHHHHcCCCHhhh----HHHHHHcC-CCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCcc-HH
Confidence 356789999999999988744333 44444444 3678899999999987 678899999888876 233 36
Q ss_pred HHHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhC
Q 009766 159 DELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTD 217 (526)
Q Consensus 159 eELe~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~d 217 (526)
++++++.++++. .+..|.++.+.++..= .+ ...-++++++++.+|....
T Consensus 79 ~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G-----~g---~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 79 KAAQYYSKACGL--NDQDGCLILGYKQYAG-----KG---VVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHT-----SS---SCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC--CCHHHHHHHHHHHHCC-----CC---CCcCHHHHHHHHHHHHHCC
Confidence 899999999976 7888998888887641 01 1122689999999999873
No 206
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=94.59 E-value=0.3 Score=49.64 Aligned_cols=154 Identities=10% Similarity=0.002 Sum_probs=107.3
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHhCCCC
Q 009766 44 AVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNF--KSYGAWHHRKWILSKGHSS 121 (526)
Q Consensus 44 AL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NP--Ksy~AW~HRrwvL~kl~~~ 121 (526)
++..+++++...+....+...-+.++...+ .++++|+.+.+.|..+| .+..+..-...++-+++ +
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g------------~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~-r 151 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILG------------DLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNN-N 151 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTT-C
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcC------------CHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCC-C
Confidence 445566666665566677777787777765 58999999999999997 88888888888887775 8
Q ss_pred hHHHHHHHHHHHHhCCC----ChhhhhH--HHHHHHHhC--cChHHHHHHHHHHHHhccCChh--HHHHHHHHHHHhhhh
Q 009766 122 IDNELRLLDKFQKADSR----NFHAWNY--RRFVAASMN--RSEEDELKYTEDMICNNFSNYS--AWHNRSLLLSNLLKR 191 (526)
Q Consensus 122 ~eeELe~~dkaLeiDpr----NyhAW~y--Rr~lL~~Lg--~~~eeELe~tdkaI~~nPsNyS--AW~yR~~LL~~L~~~ 191 (526)
.+.+.+.+.++.+.+|. +-....+ -+|+--..| .+ .+++.+++++....|...+ .... +...+++
T Consensus 152 ~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~-q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~- 226 (310)
T 3mv2_B 152 VSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETA-TSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRN- 226 (310)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTT-THHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTC-
T ss_pred HHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccH-HHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCC-
Confidence 99999999999999983 2233333 355544444 55 4789999998888876222 2222 3333333
Q ss_pred hccCccchhhhHHHHHHHHHHHHHh----------CCCCcccHHH
Q 009766 192 KVEGFVSKEKVLPDEYEFVHQAIFT----------DPDDQSGWFY 226 (526)
Q Consensus 192 ~~~g~~~~~eileeELe~v~~AI~~----------dP~DeSaW~Y 226 (526)
++++-+.++.++.. +|+|..+-..
T Consensus 227 -----------~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN 260 (310)
T 3mv2_B 227 -----------IAEAQGIVELLLSDYYSVEQKENAVLYKPTFLAN 260 (310)
T ss_dssp -----------HHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHhcccccccccCCCCCHHHHHH
Confidence 57777777766665 4778776634
No 207
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.03 E-value=0.35 Score=51.78 Aligned_cols=104 Identities=12% Similarity=-0.014 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHH
Q 009766 20 KAEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLET--------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEEL 91 (526)
Q Consensus 20 ~~ek~r~l~~~~~~~~~~geyseEAL~lt~kaL~i--------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL 91 (526)
.....+.+.+.+...+.+|.| ++|+.++.++|.+ +|+..++.+.-+.++..++ .|++++
T Consensus 305 ~l~~a~~~le~a~~~~~qg~~-~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g------------~~~eA~ 371 (490)
T 3n71_A 305 MIQFSKDTLEKIDKARSEGLY-HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQ------------AYEEAS 371 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTTCH-HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTT------------CHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhc------------CHHHHH
Confidence 344455666777778889999 8999999999986 4455677778888887776 478888
Q ss_pred HHHHHHHHh--------CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Q 009766 92 RVVESALRQ--------NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADS 137 (526)
Q Consensus 92 ~~~e~aL~~--------NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDp 137 (526)
.+++++|.+ +|.-..+.+.-+.++... +.++++..++.+++++..
T Consensus 372 ~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~-G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 372 HYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHA-GHIEVGHGMICKAYAILL 424 (490)
T ss_dssp HHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHH
Confidence 888888853 444555666667777766 489999999999988753
No 208
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.88 E-value=0.58 Score=46.36 Aligned_cols=166 Identities=8% Similarity=-0.023 Sum_probs=106.8
Q ss_pred hhcCCCcHHHHHHHHHHHHhCCCcHHHHHHH--HHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCC------hH
Q 009766 35 HHNHIYSKEAVELSTKLLETNPELYTAWNYR--KLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKS------YG 106 (526)
Q Consensus 35 ~~~geyseEAL~lt~kaL~iNPd~ytAWN~R--r~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKs------y~ 106 (526)
...|++ ++|++++.+++.+.+....+-..+ +..+..... . ...+++++.++..++...++. ..
T Consensus 66 ~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 66 VTMGAK-DKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQ----V----PDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHTCH-HHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCS----C----CSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHCCCH-HHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHh----C----CCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 456788 789999999998877665432221 111222211 0 135788899999988754433 34
Q ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHhCC------CChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHH
Q 009766 107 AWHHRKWILSKGHSSIDNELRLLDKFQKADS------RNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHN 180 (526)
Q Consensus 107 AW~HRrwvL~kl~~~~eeELe~~dkaLeiDp------rNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~y 180 (526)
++...+.++... +.|.+++.++..++..-. .-..++...+.+...++.+. ++..++++++...+..+.....
T Consensus 137 ~~~~la~~~~~~-g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~A~~~~~~al~~~~~~~~~~~~ 214 (434)
T 4b4t_Q 137 LSIKLATLHYQK-KQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLA-KSKASLTAARTAANSIYCPTQT 214 (434)
T ss_dssp HHHHHHHHHHHH-TCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHc-cChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHhhcCCCchHH
Confidence 555556666665 489999999999887532 22346666777777788874 7899999999887766655555
Q ss_pred HHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHh
Q 009766 181 RSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFT 216 (526)
Q Consensus 181 R~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~ 216 (526)
.+.+...++.... ...-++++..++.+++..
T Consensus 215 ~~~~~~~~g~~~~-----~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 215 VAELDLMSGILHC-----EDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHHTT-----SSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----HHHhHHHHHHHHHHHHHH
Confidence 5555555543211 122367778888777754
No 209
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=93.55 E-value=0.33 Score=49.32 Aligned_cols=91 Identities=13% Similarity=0.012 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHhCCC--cHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHhC
Q 009766 42 KEAVELSTKLLETNPE--LYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFK-SYGAWHHRKWILSKG 118 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd--~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPK-sy~AW~HRrwvL~kl 118 (526)
.++....+++|.++|+ +-.+|...+.+..... ...-...+++-..++++|.+||. +..+.+.-...+...
T Consensus 180 ~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vP-------p~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~ 252 (301)
T 3u64_A 180 HAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAP-------ESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIP 252 (301)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSC-------TTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCC-------CccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHh
Confidence 4788899999999999 5569999998877751 11223579999999999999996 599999888888764
Q ss_pred CCChHHHHHHHHHHHHhCCCC
Q 009766 119 HSSIDNELRLLDKFQKADSRN 139 (526)
Q Consensus 119 ~~~~eeELe~~dkaLeiDprN 139 (526)
..+++...+++++++..+|+-
T Consensus 253 ~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 253 LNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp TTCHHHHHHHHHHHHHCCGGG
T ss_pred cCCHHHHHHHHHHHHcCCCCC
Confidence 347889999999999999874
No 210
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.53 E-value=0.099 Score=55.88 Aligned_cols=127 Identities=9% Similarity=0.094 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHH
Q 009766 87 LDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTED 166 (526)
Q Consensus 87 ~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdk 166 (526)
++++++.+.++ .+..+|.--..+.-..+ .++.+..+... |..+|.+... -.-+.++.|.+ ++.+.++++
T Consensus 164 yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~-ef~lA~~~~l~-L~~~ad~l~~---lv~~Yek~G~~-eEai~lLe~ 232 (449)
T 1b89_A 164 YQAAVDGARKA-----NSTRTWKEVCFACVDGK-EFRLAQMCGLH-IVVHADELEE---LINYYQDRGYF-EELITMLEA 232 (449)
T ss_dssp HHHHHHHHHHH-----TCHHHHHHHHHHHHHTT-CHHHHHHTTTT-TTTCHHHHHH---HHHHHHHTTCH-HHHHHHHHH
T ss_pred HHHHHHHHHHc-----CCchhHHHHHHHHHHcC-cHHHHHHHHHH-HHhCHhhHHH---HHHHHHHCCCH-HHHHHHHHH
Confidence 55555555555 24445544333333332 44444333332 2233332110 11234555666 578899999
Q ss_pred HHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCC-----CCcccHHHHHHHHccc
Q 009766 167 MICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDP-----DDQSGWFYHLWLLDQT 234 (526)
Q Consensus 167 aI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP-----~DeSaW~Y~r~LL~~~ 234 (526)
++..++-....|...+.+..+..+ +.+.+.++.+-..+.+.| ++...|.-..+|+...
T Consensus 233 aL~le~ah~~~ftel~il~~ky~p----------~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~ 295 (449)
T 1b89_A 233 ALGLERAHMGMFTELAILYSKFKP----------QKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKY 295 (449)
T ss_dssp HTTSTTCCHHHHHHHHHHHHTTCH----------HHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHT
T ss_pred HhCCcHHHHHHHHHHHHHHHhcCH----------HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999988887654 456888888888888888 8889998888888553
No 211
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=92.66 E-value=2.8 Score=35.92 Aligned_cols=109 Identities=11% Similarity=0.049 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhC---
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKG--- 118 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL~kl--- 118 (526)
++|+.++.++...+..... .+.+..... .+++++.+++++... .+..+++.-+.++...
T Consensus 12 ~~A~~~~~~aa~~g~~~a~----lg~~y~~g~------------~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~ 73 (138)
T 1klx_A 12 KKAIQYYVKACELNEMFGC----LSLVSNSQI------------NKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYV 73 (138)
T ss_dssp HHHHHHHHHHHHTTCTTHH----HHHHTCTTS------------CHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHcCCCHhhh----HHHHHHcCC------------CHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCC
Confidence 6899999999988754443 443333221 356799999999987 6889999999998873
Q ss_pred CCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHH----hCcChHHHHHHHHHHHHhc
Q 009766 119 HSSIDNELRLLDKFQKADSRNFHAWNYRRFVAAS----MNRSEEDELKYTEDMICNN 171 (526)
Q Consensus 119 ~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~----Lg~~~eeELe~tdkaI~~n 171 (526)
..++++++.++.++++. .+..|...-+.+... .+.+ +++++++.++++..
T Consensus 74 ~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~-~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 74 KKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNE-KQAVKTFEKACRLG 127 (138)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH-HHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCH-HHHHHHHHHHHHCC
Confidence 25899999999999887 678898888888776 3333 68999999998763
No 212
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=92.58 E-value=0.69 Score=38.04 Aligned_cols=70 Identities=16% Similarity=0.061 Sum_probs=58.4
Q ss_pred HHhhcCCCcHHHHHHHHHHHHhC-------CCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCCh
Q 009766 33 HNHHNHIYSKEAVELSTKLLETN-------PELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSY 105 (526)
Q Consensus 33 ~~~~~geyseEAL~lt~kaL~iN-------Pd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy 105 (526)
.....|.| .+|...+.+++... +....++++-+.++.+++ .+++++..++.++..+|.+.
T Consensus 14 ~~~~~~~y-~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g------------~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 14 VAYTEADY-YHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQG------------DLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHccch-HHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHcc------------CHHHHHHHHHHHHhcCCCCH
Confidence 44577899 89999999999964 456788888888888886 48999999999999999999
Q ss_pred HHHHHHHHHH
Q 009766 106 GAWHHRKWIL 115 (526)
Q Consensus 106 ~AW~HRrwvL 115 (526)
.+.+.++++-
T Consensus 81 ~~~~n~~~~~ 90 (104)
T 2v5f_A 81 RANGNLKYFE 90 (104)
T ss_dssp HHHHHHHHHH
T ss_pred HHHhhHHHHH
Confidence 9987777443
No 213
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=91.37 E-value=0.45 Score=50.85 Aligned_cols=116 Identities=5% Similarity=-0.000 Sum_probs=69.4
Q ss_pred ChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHHHHHHHHHhccCChhHHHHHHH
Q 009766 104 SYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSL 183 (526)
Q Consensus 104 sy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe~tdkaI~~nPsNySAW~yR~~ 183 (526)
+..+|..-+-.+... +.|+++..+|+++ ..|...+-++-++|.+ +++++.+.++ ++...|..-..
T Consensus 121 n~~a~~~IGd~~~~~-g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~y-q~AVea~~KA-----~~~~~Wk~v~~ 185 (449)
T 1b89_A 121 NNAHIQQVGDRCYDE-KMYDAAKLLYNNV--------SNFGRLASTLVHLGEY-QAAVDGARKA-----NSTRTWKEVCF 185 (449)
T ss_dssp -----------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCH-HHHHHHHHHH-----TCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHc-CCHHHHHHHHHHh--------hhHHHHHHHHHHhccH-HHHHHHHHHc-----CCchhHHHHHH
Confidence 334777766666655 3778888888866 4677777888888887 4688887777 46677766555
Q ss_pred HHHHhhhhhc---cCcc---------------chhhhHHHHHHHHHHHHHhCCCCcccHHHHHHHHccc
Q 009766 184 LLSNLLKRKV---EGFV---------------SKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQT 234 (526)
Q Consensus 184 LL~~L~~~~~---~g~~---------------~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~LL~~~ 234 (526)
..-.++.... .+.. .....+++++.++.+++.+++.+...|....-|+.+.
T Consensus 186 aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 186 ACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp HHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred HHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 5544431110 0000 1123468999999999999999999999988877653
No 214
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=90.82 E-value=0.86 Score=47.73 Aligned_cols=99 Identities=6% Similarity=-0.049 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHH
Q 009766 24 LRVLQSQFLHNHHNHIYSKEAVELSTKLLET--------NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVE 95 (526)
Q Consensus 24 ~r~l~~~~~~~~~~geyseEAL~lt~kaL~i--------NPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e 95 (526)
.+.+...+-..+.+|.| ++|+.++.++|.+ +|....+.+.-+.+...++ .|++++.+++
T Consensus 287 ~~~ll~~ie~~~~~g~~-~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g------------~~~eA~~~~~ 353 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKW-EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLG------------LLEEALFYGT 353 (429)
T ss_dssp HHHHHHHHHHHHHTTCH-HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHT------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccH-HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhc------------cHHHHHHHHH
Confidence 34555556667788999 8999999999975 3334566667777776665 5888888888
Q ss_pred HHHHh--------CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhC
Q 009766 96 SALRQ--------NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKAD 136 (526)
Q Consensus 96 ~aL~~--------NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiD 136 (526)
++|.+ +|.--..++.-+.++... +.+++++.++.+++++-
T Consensus 354 ~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~-g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 354 RTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQ-GMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp HHHHHHHHHSCSSCHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHcCCCChHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHH
Confidence 88853 344445566666666666 48999999999998865
No 215
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=90.69 E-value=1.3 Score=36.43 Aligned_cols=63 Identities=17% Similarity=0.143 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHhC-------CCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHH
Q 009766 86 ILDEELRVVESALRQN-------FKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFV 149 (526)
Q Consensus 86 ~~~eEL~~~e~aL~~N-------PKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~l 149 (526)
.|..++.+++.++... +....++.+-+.++.+++ .+++++.+++++++++|.+..+...++++
T Consensus 20 ~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g-~~~~A~~~~~~al~l~P~~~~~~~n~~~~ 89 (104)
T 2v5f_A 20 DYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQG-DLDKALLLTKKLLELDPEHQRANGNLKYF 89 (104)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHhcCCCCHHHHhhHHHH
Confidence 5788888888888753 345666777777777764 77788888888888888777776666643
No 216
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=88.73 E-value=17 Score=38.34 Aligned_cols=56 Identities=11% Similarity=-0.046 Sum_probs=41.7
Q ss_pred HHHHHHHHHhccCChhHHHHHHHHHHHhhhhhccCccchhhhHHHHHHHHHHHHHhCCCCcccHHHHHH
Q 009766 161 LKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLW 229 (526)
Q Consensus 161 Le~tdkaI~~nPsNySAW~yR~~LL~~L~~~~~~g~~~~~eileeELe~v~~AI~~dP~DeSaW~Y~r~ 229 (526)
...+++++...|.....|..-...+...+. .+++.+.+.+|+.. |.+...|.+...
T Consensus 199 ~~~ye~al~~~p~~~~lW~~ya~~~~~~~~------------~~~ar~i~erAi~~-P~~~~l~~~y~~ 254 (493)
T 2uy1_A 199 HFIHNYILDSFYYAEEVYFFYSEYLIGIGQ------------KEKAKKVVERGIEM-SDGMFLSLYYGL 254 (493)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHH-CCSSHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHhC-CCcHHHHHHHHh
Confidence 356788888889998888866555443321 47888899999999 999988875433
No 217
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=85.26 E-value=40 Score=35.42 Aligned_cols=124 Identities=8% Similarity=-0.021 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCChHHHHHHHHHH------
Q 009766 42 KEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWIL------ 115 (526)
Q Consensus 42 eEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy~AW~HRrwvL------ 115 (526)
.++..+++++|..+|....+|..-...+...+ ..+++...+++++.. |++...|..-.-..
T Consensus 196 ~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~------------~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~ 262 (493)
T 2uy1_A 196 SRMHFIHNYILDSFYYAEEVYFFYSEYLIGIG------------QKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVY 262 (493)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHH
Confidence 35678999999999999999997766665554 368899999999999 99988886432221
Q ss_pred ----HhC-----------------------------CCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHHH
Q 009766 116 ----SKG-----------------------------HSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELK 162 (526)
Q Consensus 116 ----~kl-----------------------------~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeELe 162 (526)
... ....+++...++++ ...+..++.|-....+-...+...+.+..
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ 341 (493)
T 2uy1_A 263 GDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYN 341 (493)
T ss_dssp HHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHH
T ss_pred HHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHH
Confidence 000 01234555667777 33334667776554443344432246777
Q ss_pred HHHHHHHhccCChhHHH
Q 009766 163 YTEDMICNNFSNYSAWH 179 (526)
Q Consensus 163 ~tdkaI~~nPsNySAW~ 179 (526)
.++.+++..|++...|.
T Consensus 342 ife~al~~~~~~~~~~~ 358 (493)
T 2uy1_A 342 IFSSGLLKHPDSTLLKE 358 (493)
T ss_dssp HHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHCCCCHHHHH
Confidence 78888888777765543
No 218
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=82.78 E-value=11 Score=33.51 Aligned_cols=63 Identities=10% Similarity=0.073 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHhC-C-CChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHH
Q 009766 86 ILDEELRVVESALRQN-F-KSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFV 149 (526)
Q Consensus 86 ~~~eEL~~~e~aL~~N-P-Ksy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~l 149 (526)
...+-+.+++.+++.+ | ....+-++-.....++ +.|++++.+++.+|+++|.|-.|..=+.-+
T Consensus 53 d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~ykl-g~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 53 DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRL-KEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3455666777766655 4 3344444444444455 377777777777777777777775544433
No 219
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=80.77 E-value=22 Score=31.85 Aligned_cols=63 Identities=6% Similarity=-0.041 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHH
Q 009766 85 SILDEELRVVESALRQNF-KSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRF 148 (526)
Q Consensus 85 ~~~~eEL~~~e~aL~~NP-Ksy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~ 148 (526)
....+.+.+++.+++.+| ..-..++|-..--.+++ .|++++.+++.+|+++|.|-.|=.=+.-
T Consensus 57 ~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklg-dY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 57 NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLG-EYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 355677778888887777 34666666666666664 7888888888888888888777444433
No 220
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=77.29 E-value=42 Score=30.41 Aligned_cols=62 Identities=6% Similarity=-0.055 Sum_probs=40.1
Q ss_pred hhHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHH
Q 009766 85 SILDEELRVVESALRQNFK-SYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRR 147 (526)
Q Consensus 85 ~~~~eEL~~~e~aL~~NPK-sy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr 147 (526)
....+-+.+++.+++.+|. .-..-++...-..++ +.|++++.+++.+|+++|.|-.|=.=+.
T Consensus 56 ~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl-~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 56 NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKL-GEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp HHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHh-hhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3567778888888887774 233333333333345 4788888888888888888877744433
No 221
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=75.16 E-value=5.6 Score=41.75 Aligned_cols=83 Identities=22% Similarity=0.168 Sum_probs=62.9
Q ss_pred CChHHHHHHHHHHHHhC-----CCCh---hhhhHHHHHHHHhCcChHHHHHHHHHHHHh--------ccCChhHHHHHHH
Q 009766 120 SSIDNELRLLDKFQKAD-----SRNF---HAWNYRRFVAASMNRSEEDELKYTEDMICN--------NFSNYSAWHNRSL 183 (526)
Q Consensus 120 ~~~eeELe~~dkaLeiD-----prNy---hAW~yRr~lL~~Lg~~~eeELe~tdkaI~~--------nPsNySAW~yR~~ 183 (526)
+.|++++++++++|++. |.+. .+.+.-+.++..+|+++ +++.++.+++.+ ||.=-..+++.+.
T Consensus 312 g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~-eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 312 KSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWE-GALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp SCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHH-HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 47899999999999964 4443 34566677777888884 788899888865 5555677888888
Q ss_pred HHHHhhhhhccCccchhhhHHHHHHHHHHHHH
Q 009766 184 LLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIF 215 (526)
Q Consensus 184 LL~~L~~~~~~g~~~~~eileeELe~v~~AI~ 215 (526)
++...++ +++++.++.+|+.
T Consensus 391 ~~~~qg~------------~~eA~~~~~~Al~ 410 (433)
T 3qww_A 391 LYMGLEN------------KAAGEKALKKAIA 410 (433)
T ss_dssp HHHHTTC------------HHHHHHHHHHHHH
T ss_pred HHHhccC------------HHHHHHHHHHHHH
Confidence 8887765 6888888888775
No 222
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=74.97 E-value=17 Score=32.16 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=71.9
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHhCC--CChHHHHHHHHHHHHhC-C-CChhhhhHHHHHHHHhCcChHHHHHHHHHH
Q 009766 92 RVVESALRQNFKSYGAWHHRKWILSKGH--SSIDNELRLLDKFQKAD-S-RNFHAWNYRRFVAASMNRSEEDELKYTEDM 167 (526)
Q Consensus 92 ~~~e~aL~~NPKsy~AW~HRrwvL~kl~--~~~eeELe~~dkaLeiD-p-rNyhAW~yRr~lL~~Lg~~~eeELe~tdka 167 (526)
+-+...+..++-+..+=..-.|.|-+.. ....+-+.++...+..+ | ++-.+-+|-+...-+++.|. +++.+++.+
T Consensus 22 ~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~-~A~~~~~~l 100 (126)
T 1nzn_A 22 KKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE-KALKYVRGL 100 (126)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHH
T ss_pred HHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH-HHHHHHHHH
Confidence 4445555667777777777788887643 12346888999988877 5 66777777787778889995 899999999
Q ss_pred HHhccCChhHHHHHHHHHHHh
Q 009766 168 ICNNFSNYSAWHNRSLLLSNL 188 (526)
Q Consensus 168 I~~nPsNySAW~yR~~LL~~L 188 (526)
|+.+|.|..|..-+..+-.++
T Consensus 101 L~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 101 LQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp HHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHH
Confidence 999999999877665554443
No 223
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=65.80 E-value=78 Score=28.64 Aligned_cols=102 Identities=12% Similarity=0.173 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHhC---CCChHHHHHHHHHHHhCC--CChHHHHHHHHHHHHhCC-CChhhhhHHHHHHHHhCcChHHHH
Q 009766 88 DEELRVVESALRQN---FKSYGAWHHRKWILSKGH--SSIDNELRLLDKFQKADS-RNFHAWNYRRFVAASMNRSEEDEL 161 (526)
Q Consensus 88 ~eEL~~~e~aL~~N---PKsy~AW~HRrwvL~kl~--~~~eeELe~~dkaLeiDp-rNyhAW~yRr~lL~~Lg~~~eeEL 161 (526)
.+||..++.--... .-+.++=..-.|+|-+.. ....+.+.+++..+..+| +.-.+-+|-+.-.-+++.|. +++
T Consensus 19 ~eeL~~lr~qY~~E~~~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~-~Ar 97 (144)
T 1y8m_A 19 PQQLEILRQQVVSEGGPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYS-MAK 97 (144)
T ss_dssp HHHHHHHHHHHHHTTSTTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHH-HHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHH-HHH
Confidence 45555555555433 345555555567777653 124578889999999887 44456666666666778884 899
Q ss_pred HHHHHHHHhccCChhHHHHHHHHHHHhhh
Q 009766 162 KYTEDMICNNFSNYSAWHNRSLLLSNLLK 190 (526)
Q Consensus 162 e~tdkaI~~nPsNySAW~yR~~LL~~L~~ 190 (526)
.|++.+++..|.|..|-.-+..+-.++.+
T Consensus 98 ~y~d~lL~~eP~n~QA~~Lk~~Ie~~i~k 126 (144)
T 1y8m_A 98 RYVDTLFEHERNNKQVGALKSMVEDKIQK 126 (144)
T ss_dssp HHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999887666665555443
No 224
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=61.41 E-value=27 Score=37.05 Aligned_cols=84 Identities=8% Similarity=-0.052 Sum_probs=62.4
Q ss_pred hhHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC-----C---ChhhhhHHHH
Q 009766 85 SILDEELRVVESALRQ--------NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADS-----R---NFHAWNYRRF 148 (526)
Q Consensus 85 ~~~~eEL~~~e~aL~~--------NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDp-----r---NyhAW~yRr~ 148 (526)
+.|++++..++++|.+ +|.-..+.+.-..++... +.|++++.++.++|++.. . =..+.+.-+.
T Consensus 323 g~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~-g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 401 (490)
T 3n71_A 323 GLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYL-QAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGL 401 (490)
T ss_dssp TCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 4689999999999964 344455666667777766 499999999999998752 2 2245566677
Q ss_pred HHHHhCcChHHHHHHHHHHHHh
Q 009766 149 VAASMNRSEEDELKYTEDMICN 170 (526)
Q Consensus 149 lL~~Lg~~~eeELe~tdkaI~~ 170 (526)
++...|.+. +++..+.+++.+
T Consensus 402 ~~~~~G~~~-eA~~~~~~Al~i 422 (490)
T 3n71_A 402 TNWHAGHIE-VGHGMICKAYAI 422 (490)
T ss_dssp HHHHTTCHH-HHHHHHHHHHHH
T ss_pred HHHHCCCHH-HHHHHHHHHHHH
Confidence 788888884 788888888864
No 225
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=58.25 E-value=42 Score=30.07 Aligned_cols=78 Identities=8% Similarity=-0.028 Sum_probs=58.3
Q ss_pred HHHHHHhhcCCCc--HHHHHHHHHHHHhCCC-cHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHhCCCCh
Q 009766 29 SQFLHNHHNHIYS--KEAVELSTKLLETNPE-LYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSY 105 (526)
Q Consensus 29 ~~~~~~~~~geys--eEAL~lt~kaL~iNPd-~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~NPKsy 105 (526)
++.....+...-. .+++.+.+.++..+|+ .-..+.|....--+++ .|.+++++++.+|+..|.|-
T Consensus 45 ~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklg------------dY~~Ar~y~d~lL~~eP~N~ 112 (134)
T 3o48_A 45 NYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLG------------EYSMAKRYVDTLFEHERNNK 112 (134)
T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhh------------hHHHHHHHHHHHHhhCCCCH
Confidence 4444555554432 4889999999999984 4566666666666665 69999999999999999999
Q ss_pred HHHHHHHHHHHhC
Q 009766 106 GAWHHRKWILSKG 118 (526)
Q Consensus 106 ~AW~HRrwvL~kl 118 (526)
+|=.-+..+-.++
T Consensus 113 QA~~Lk~~Ie~ki 125 (134)
T 3o48_A 113 QVGALKSMVEDKI 125 (134)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9988776665543
No 226
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=50.63 E-value=38 Score=35.16 Aligned_cols=83 Identities=10% Similarity=0.002 Sum_probs=57.9
Q ss_pred CChHHHHHHHHHHHHhC-----CCCh---hhhhHHHHHHHHhCcChHHHHHHHHHHHHh--------ccCChhHHHHHHH
Q 009766 120 SSIDNELRLLDKFQKAD-----SRNF---HAWNYRRFVAASMNRSEEDELKYTEDMICN--------NFSNYSAWHNRSL 183 (526)
Q Consensus 120 ~~~eeELe~~dkaLeiD-----prNy---hAW~yRr~lL~~Lg~~~eeELe~tdkaI~~--------nPsNySAW~yR~~ 183 (526)
+.|+++++++++++++. |.|. .+.+.-+-++...|.+ +++++++.+++.+ ||.=-..+++.+.
T Consensus 301 g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~-~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~ 379 (429)
T 3qwp_A 301 WKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLL-EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGK 379 (429)
T ss_dssp TCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccH-HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHH
Confidence 47899999999999864 3343 3455556666677888 4788999888864 3333455666666
Q ss_pred HHHHhhhhhccCccchhhhHHHHHHHHHHHHH
Q 009766 184 LLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIF 215 (526)
Q Consensus 184 LL~~L~~~~~~g~~~~~eileeELe~v~~AI~ 215 (526)
++...++ +++++.++.+|+.
T Consensus 380 ~~~~~g~------------~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 380 LQLHQGM------------FPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHTTC------------HHHHHHHHHHHHH
T ss_pred HHHhcCC------------HHHHHHHHHHHHH
Confidence 6666554 6788888888774
No 227
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 SUBC F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11
Probab=31.04 E-value=12 Score=40.15 Aligned_cols=75 Identities=21% Similarity=0.421 Sum_probs=51.1
Q ss_pred HHHHHhhhh------ccccchhHHHHHHHHHHHhhh----cCCCCCCCcchHHHHHHHHHhhcc--------------Cc
Q 009766 438 IDHFRELLS------LINCKIGKLTLARLLMAHDAM----MCPPANKISHSEEVLELYNDLMRL--------------DP 493 (526)
Q Consensus 438 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 493 (526)
||.+..+.. --.+..||-|||+.|+...+. .+-...++-|.+|+.++|.++..- ||
T Consensus 142 ID~L~pi~kGq~~~i~G~sGvGKTtL~~~l~~~~~~~~~~i~V~~~iGerttev~el~~~l~~~~~l~~tvvv~~~~~d~ 221 (473)
T 1sky_E 142 VDLLAPYIKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEP 221 (473)
T ss_dssp HHHHSCEETTCEEEEECCSSSCHHHHHHHHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHHHTSGGGGEEEEEECTTSC
T ss_pred HHHHhhhccCCEEEEECCCCCCccHHHHHHHhhhhhccCcEEEEeeeccCchHHHHHHHHhhhcCCcceeEEEEEcCCCC
Confidence 666655332 137889999999998776543 233456889999999999866321 11
Q ss_pred ------------chhhhhhch---hhhhhhhhhh
Q 009766 494 ------------THVQYYKDQ---HSLVLLQQVF 512 (526)
Q Consensus 494 ------------~~~~~~~~~---~~~~~~~~~~ 512 (526)
+-.+||.|+ |-|++++.+|
T Consensus 222 pg~r~~~~~~~ltiAEyFrd~~G~~VLl~~D~it 255 (473)
T 1sky_E 222 PGARMRVALTGLTMAEYFRDEQGQDGLLFIDNIF 255 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCEEEEEEECTH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccHH
Confidence 567888884 6677766554
No 228
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=29.46 E-value=3.1e+02 Score=30.90 Aligned_cols=120 Identities=9% Similarity=0.046 Sum_probs=0.0
Q ss_pred HHHHHHHHhh-cCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhhhcCCCCCCchhhhhHHHHHHHHHHHHHh-----
Q 009766 27 LQSQFLHNHH-NHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ----- 100 (526)
Q Consensus 27 l~~~~~~~~~-~geyseEAL~lt~kaL~iNPd~ytAWN~Rr~vL~~L~~~~~sdPe~~~~~~~eEL~~~e~aL~~----- 100 (526)
|.+.++...+ .|.+-+.++++++++...+|.+......-...+..... .+|++....+-+.
T Consensus 250 L~~~Ll~~~~~t~~~~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~-------------~~Ev~av~ll~~~l~~~~ 316 (754)
T 4gns_B 250 LMYSLKSFIAITPSLVDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIE-------------TKELDMITILNETLDPLL 316 (754)
T ss_dssp HHHHHHHHHHTCGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCG-------------GGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccccHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhh-------------hhhHHHHHHHHHHHHHhh
Q ss_pred ----------------CCCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCCChhhhhHHHHHHHHhCcChHHHH
Q 009766 101 ----------------NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDEL 161 (526)
Q Consensus 101 ----------------NPKsy~AW~HRrwvL~kl~~~~eeELe~~dkaLeiDprNyhAW~yRr~lL~~Lg~~~eeEL 161 (526)
.|-.+..-+--.-.|..-+ +++-||++..++...-|..|.+|.+-.-+.-.++.+ +.+|
T Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~-~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~-e~AL 391 (754)
T 4gns_B 317 SLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRG-DYELALGVSNTSTELALDSFESWYNLARCHIKKEEY-EKAL 391 (754)
T ss_dssp HHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCH-HHHH
T ss_pred hhhhhhcccccccccccCcchHHHHHHHHHHhccC-cHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccH-HHHH
No 229
>4hu2_A Probable conserved lipoprotein LPPS; cell-WALL, transpeptidase, immunoglobuline-fold, peptidoglyc unknown function; 1.46A {Mycobacterium tuberculosis}
Probab=27.68 E-value=87 Score=29.72 Aligned_cols=81 Identities=12% Similarity=0.195 Sum_probs=41.6
Q ss_pred CcceeEeecccccccc--ccceEEecccCcCccceeeeCCCCCCccceeEEEeccCCCCCCCCCccceEEEecCcccccc
Q 009766 278 TFPLVLYFNQAVEGVN--SSTITVDSELNTNKDLVWKPLSSCNSKAAQVWVTQLNLPDGNTHSSKVFPVEVSLGHSQGII 355 (526)
Q Consensus 278 ~~~~~~~f~~~v~~~~--~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (526)
-.|+++.|++||..-. ...+++++.-. ....|.=+++. +. -|.-+-. ..+-..+.|++.+ .|+-
T Consensus 115 g~Pv~v~F~~pV~draave~ai~Vtt~p~--v~G~~~W~~d~--~v--~~RP~~y-----W~~gT~Vtv~~~l---~Gv~ 180 (198)
T 4hu2_A 115 GEPVAIRFDENIADRGAAEKAIKITTNPP--VEGAFYWLNNR--EV--RWRPEHF-----WKPGTAVDVAVNT---YGVD 180 (198)
T ss_dssp TCCEEEEESSCCSCHHHHHHTEEEEEESC--CCEEEEESSSS--EE--EEEESSC-----CCTTEEEEEEECC---BTCB
T ss_pred CceEEEECCCCCCChHHhhcccEEecCCC--CcEEEEECCCC--EE--EEecccc-----CCCCCEEEEEEEC---CCee
Confidence 3699999999995210 23455543322 22333222211 11 2221111 1233356666654 5887
Q ss_pred cCCCcccCCCcceEEEE
Q 009766 356 SSSGFHYSNPFCFAFRV 372 (526)
Q Consensus 356 ~~~g~~~~~p~~~~~~~ 372 (526)
-.+|-|=..-....|||
T Consensus 181 ~g~g~yG~~d~~~~FtI 197 (198)
T 4hu2_A 181 LGEGMFGEDNVQTHFTI 197 (198)
T ss_dssp CSTTEEESSCEEEEEEE
T ss_pred cCCceEEecCcEEEEEe
Confidence 78887766666677776
Done!