Query 009767
Match_columns 526
No_of_seqs 267 out of 735
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 12:33:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009767.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009767hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hu3a_ a.118.1.14 (A:) Eukary 100.0 2.5E-32 1.8E-36 266.6 14.4 168 1-176 65-243 (243)
2 d1ug3a1 a.118.1.14 (A:1235-142 100.0 2.2E-32 1.6E-36 259.6 9.8 159 354-512 2-161 (193)
3 d2nsza1 a.118.1.14 (A:322-450) 100.0 1E-30 7.5E-35 232.5 12.3 121 359-479 4-125 (129)
4 d1uw4b_ a.118.1.14 (B:) Regula 99.9 7.9E-27 5.8E-31 229.3 11.1 168 1-199 59-246 (248)
5 d1h2vc1 a.118.1.14 (C:29-290) 98.1 5.5E-06 4E-10 80.0 10.6 142 1-177 57-219 (262)
6 d1h2vc1 a.118.1.14 (C:29-290) 58.3 51 0.0037 29.5 12.5 91 405-504 87-178 (262)
7 d1ls1a1 a.24.13.1 (A:1-88) Sig 39.6 44 0.0032 25.1 7.1 57 415-471 8-64 (88)
8 d1w53a_ a.186.1.2 (A:) Phospho 39.1 67 0.0049 23.9 8.0 23 358-380 4-26 (84)
9 d1dvpa1 a.118.9.2 (A:1-145) Hr 36.7 98 0.0071 24.8 10.3 91 75-175 24-118 (145)
10 d1sxjc1 a.80.1.1 (C:239-333) R 36.7 60 0.0044 24.0 7.7 50 394-446 2-51 (95)
11 d2jm6b1 f.1.4.1 (B:147-308) EA 36.3 31 0.0023 28.7 6.4 20 354-373 2-21 (162)
12 d1mhqa_ a.118.9.2 (A:) ADP-rib 33.7 32 0.0023 28.1 5.9 106 75-193 20-131 (143)
13 d1ujka_ a.118.9.2 (A:) ADP-rib 31.9 67 0.0049 26.0 7.7 91 75-174 27-125 (145)
14 d1elka_ a.118.9.2 (A:) Tom1 pr 27.9 44 0.0032 27.5 5.9 95 76-174 32-128 (153)
15 d1juqa_ a.118.9.2 (A:) ADP-rib 26.0 87 0.0064 25.4 7.5 91 77-174 23-119 (151)
16 d1sxjb1 a.80.1.1 (B:231-322) R 24.5 1.2E+02 0.009 22.1 10.3 47 394-446 2-48 (92)
17 d1wgwa_ a.24.13.1 (A:) Signal 23.8 45 0.0032 25.6 4.7 80 414-501 12-91 (99)
18 d2vglb_ a.118.1.10 (B:) Adapti 22.9 85 0.0062 30.8 8.0 141 366-513 352-502 (579)
19 d1ug3a2 a.118.1.14 (A:1438-156 22.1 1.7E+02 0.012 22.7 9.0 114 356-477 2-124 (127)
20 d1vi0a2 a.121.1.1 (A:78-194) H 21.4 1.4E+02 0.011 21.7 9.0 103 362-471 3-114 (117)
21 d1sd4a_ a.4.5.39 (A:) Penicill 21.0 1.7E+02 0.012 22.4 9.9 91 380-484 10-116 (122)
No 1
>d1hu3a_ a.118.1.14 (A:) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=2.5e-32 Score=266.58 Aligned_cols=168 Identities=37% Similarity=0.685 Sum_probs=128.8
Q ss_pred CHHHHHHHHhhhCCCCCCCCCCCcchhHHHHHHHHHHHHHhcccccHHHHh-------cCCChHH----HHHHHHHHHHH
Q 009767 1 MYALLCSDLNEKLPPFPSDEPGGKDITFKRILLNHCQEAFEGADNTRAEIR-------QMTAPEQ----EMERMDQERLV 69 (526)
Q Consensus 1 mYA~LC~~L~~~~~~~~~~~~~~~~~~Fr~~LL~~cQ~eFe~~~~~~~~~~-------~~~~~e~----e~e~~~~~~~~ 69 (526)
|||+||..|....+... +.+++...||+.||++||++|++......... ....++. ..|.++.+.+.
T Consensus 65 ~YA~Lc~~l~~~~~~~~--~~~~~~~~F~~~Ll~~~q~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 142 (243)
T d1hu3a_ 65 AYANMCRCLVTLKVPMA--DKPGNTVNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDELEEAKDKA 142 (243)
T ss_dssp HHHHHHHHHTTCCCC-----------CHHHHHHHHHHHHHHHHTC------------------------------CCSSH
T ss_pred HHHHHHHHHHHhcCccc--cccccchHHHHHHHHHHHHHHHHhhhhhhhhHhhhcccccccchHHHHHHHHHHHHHHHHH
Confidence 69999999999877653 23345688999999999999998754321111 1111111 01222233467
Q ss_pred HhhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHhhhhhcCCcchhhHHHHHHHHHHH
Q 009767 70 KLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLENDGKTCPAEENVEAICQFFNTIGKQLDENPKSRRVNDVYFSRLKEL 149 (526)
Q Consensus 70 K~r~lGnirFIGELfk~~~l~e~ii~~ci~~Ll~~~~~~~p~ee~iE~lc~LL~tiG~~Ld~~~~~~~~~d~~f~~l~~l 149 (526)
|+|++|+|+||||||+.++++.++|+.||..|+.+ |+|++|||+|.||++||+.|+. ..++..||.||++|+.+
T Consensus 143 k~~~~g~i~figeLy~~~~v~~~~i~~~l~~Ll~~-----~~e~~ie~l~~lL~~~G~~L~~-~~~~~~~~~~~~~l~~~ 216 (243)
T d1hu3a_ 143 RRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLLKN-----HDEESLECLCRLLTTIGKDLDF-EKAKPRMDQYFNQMEKI 216 (243)
T ss_dssp HHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHS-----CSHHHHHHHHHHHHHHHHHHCC-TTTHHHHHHHHHHHHHH
T ss_pred HHHhcchHHHHHHHHccccchHHHHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999987 6999999999999999999986 44567899999999999
Q ss_pred HhCCCCChhHHHHHHHHHHHHhCCCCc
Q 009767 150 TTNSQLVPRLRFMIHDVLDLRANNWVP 176 (526)
Q Consensus 150 ~~~~~ls~Rirfmi~dvidlR~~~W~~ 176 (526)
..++++|+||||||+||+|+|++||++
T Consensus 217 ~~~~~~s~Rirfml~~l~elR~~~W~s 243 (243)
T d1hu3a_ 217 VKERKTSSRIRFMLQDVIDLRLCNWVS 243 (243)
T ss_dssp HHSCSSCHHHHHHHHHHHHHHHTTTCC
T ss_pred HhcCCCCHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999984
No 2
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=2.2e-32 Score=259.58 Aligned_cols=159 Identities=25% Similarity=0.289 Sum_probs=148.6
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCcChHHHHHHHHHHHhCCCCCHHH
Q 009767 354 TKLNLADLRKKTVSLLEEYFSIRILDEALQCVEELRAPTYHPEVVKEAIALALEKIPPCVEPVIQLLEFLLNKNVLTTRD 433 (526)
Q Consensus 354 ~~~s~eel~kk~~~il~EY~~~~D~~Ea~~~i~eL~~p~~~~~~V~~~I~~aLE~~~~~re~v~~LL~~L~~~~~ls~~q 433 (526)
+.+|+||++|+++++|+|||+++|++||+.||+||++|+|||+||+.+|+.+||+++.+|+++++||++|.++|+||.+|
T Consensus 2 ~~ls~ee~~kk~~~il~Ey~~~~D~~Ea~~~l~el~~p~~~~~~V~~~i~~~le~~~~~re~~~~Ll~~L~~~~~is~~~ 81 (193)
T d1ug3a1 2 AALSEEELEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGVESTLERSAIAREHMGQLLHQLLCAGHLSTAQ 81 (193)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCCGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTSSCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHCCCCCHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhhhcCCCchhHHHHHHHHHHHHcCCCChHHHHHHH-HhhhchhHHHHHHHHHHHHHhcCCCchhhHH
Q 009767 434 IGTGCLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVLKEVL-KKVEDNMFRRSIFTAAMKSIQSSPAGQEVLA 512 (526)
Q Consensus 434 ~~~Gf~~vl~~l~Dl~iDiP~a~~~la~~iar~i~~~~l~~~~i~~~~-~~~~~~~~~~~~l~~~l~~l~~~~~g~~~~~ 512 (526)
|.+||.++++.++|+++|+|+||+|+|+|+|++|.+|++++++|...+ +.+.+.+....+|.++|+.+....+.+|+.+
T Consensus 82 ~~~gf~~~l~~l~Dl~iDiP~a~~~la~~~a~~i~~~~l~l~~l~~~~~~~l~~~g~~~~l~~~~L~~l~~~~G~~~~~~ 161 (193)
T d1ug3a1 82 YYQGLYEILELAEDMEIDIPHVWLYLAELVTPILQEGGVPMGELFREITKPLRPLGKAASLLLEILGLLCKSMGPKKVGT 161 (193)
T ss_dssp HHHHHHHHHHHHHHHTTTCTTHHHHHHHHHGGGGSTTSCCHHHHHHHHTTTHHHHTCHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHhhhhhhhcchHHHHHHHHHHHHHHHcCCCCHHHHHHHhcccccccchHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999999999999999999999999999999999996544 5677888899999999999999855455543
No 3
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.97 E-value=1e-30 Score=232.53 Aligned_cols=121 Identities=26% Similarity=0.361 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCcCh-HHHHHHHHHHHhCCCCCHHHHHHH
Q 009767 359 ADLRKKTVSLLEEYFSIRILDEALQCVEELRAPTYHPEVVKEAIALALEKIPPCV-EPVIQLLEFLLNKNVLTTRDIGTG 437 (526)
Q Consensus 359 eel~kk~~~il~EY~~~~D~~Ea~~~i~eL~~p~~~~~~V~~~I~~aLE~~~~~r-e~v~~LL~~L~~~~~ls~~q~~~G 437 (526)
++++|+++++|+|||+++|++||++||+||++|+|||+||+.+|+++||+++.+| +++++||++|+++|+||++||.+|
T Consensus 4 ~~l~kk~~~ll~EY~~~~D~~Ea~~~l~eL~~p~~~~e~V~~~i~~ale~~~~~r~~~~~~Ll~~L~~~~~is~~~i~~G 83 (129)
T d2nsza1 4 NHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRG 83 (129)
T ss_dssp CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999998887 789999999999999999999999
Q ss_pred HHHHhhcchhhhcCCCchhHHHHHHHHHHHHcCCCChHHHHH
Q 009767 438 CLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVLKE 479 (526)
Q Consensus 438 f~~vl~~l~Dl~iDiP~a~~~la~~iar~i~~~~l~~~~i~~ 479 (526)
|.++++.++|+++|+|+||++||+|+++||.+|++|++++..
T Consensus 84 f~~~l~~l~Dl~lDvP~a~~~l~~fi~rav~d~~l~~~~~~~ 125 (129)
T d2nsza1 84 YERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDL 125 (129)
T ss_dssp HHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTCSCHHHHHT
T ss_pred HHHHHhhCcHHhhccccHHHHHHHHHHHHHHcCCCCHHHHhh
Confidence 999999999999999999999999999999999999998764
No 4
>d1uw4b_ a.118.1.14 (B:) Regulator of nonsense transcripts 2, UPF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=7.9e-27 Score=229.30 Aligned_cols=168 Identities=17% Similarity=0.251 Sum_probs=133.6
Q ss_pred CHHHHHHHHhhhCCCCCCCCCCCcchhHHHHHHHHHHHHHhcccccHHHHhcCCChHHHHHHHHHHHHHHhhhhhhHHHH
Q 009767 1 MYALLCSDLNEKLPPFPSDEPGGKDITFKRILLNHCQEAFEGADNTRAEIRQMTAPEQEMERMDQERLVKLRTLGNIRLI 80 (526)
Q Consensus 1 mYA~LC~~L~~~~~~~~~~~~~~~~~~Fr~~LL~~cQ~eFe~~~~~~~~~~~~~~~e~e~e~~~~~~~~K~r~lGnirFI 80 (526)
+||.||..|+...| .|...++++|+++|+..... .+.+.++|.+|+|+||
T Consensus 59 ~yA~l~a~L~~~~~------------~f~~~~id~l~e~f~~~~e~------------------~~~~~~~r~~~~v~fi 108 (248)
T d1uw4b_ 59 CVANLLAGLVLYQE------------DVGIHVVDGVLEDIRLGMEV------------------NQPKFNQRRISSAKFL 108 (248)
T ss_dssp HHHHHHHHHTTTCH------------HHHHHHHHHHHHHHHHHHHH------------------CCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhH------------HHHHHHHHHHHHHHHHHHHH------------------hhHHHHHHHHHHHHHH
Confidence 59999999987643 58999999999999865320 0023467889999999
Q ss_pred HHHhcCCCCCHHHHHHHHHHHHhcCC--CC-----CC--ChhhHHHHHHHHHHHhhhhhcCCcchhhHHHHHHHHHH---
Q 009767 81 GELLKQKMVPEKIVHHIVQELLENDG--KT-----CP--AEENVEAICQFFNTIGKQLDENPKSRRVNDVYFSRLKE--- 148 (526)
Q Consensus 81 GELfk~~~l~e~ii~~ci~~Ll~~~~--~~-----~p--~ee~iE~lc~LL~tiG~~Ld~~~~~~~~~d~~f~~l~~--- 148 (526)
||||+.+|++.++|+.|+..||.... .. +| +...|||+|.||+|||+.|++ ++.+..||.||..++.
T Consensus 109 geLy~~~~v~~~~i~~~l~~Ll~~~~~~~~~~~~~d~~~d~~rIe~l~~lL~t~G~~l~~-~~~~~~l~~~~~~fq~y~~ 187 (248)
T d1uw4b_ 109 GELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDR-GSSKRKLDCFLVYFQRYVW 187 (248)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHTTCCTTSCCCSSSCTTCCHHHHHHHHHHHHHGGGCSS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCcHHHHHHHHHHHHhcCCCcccccccCCCCcchhHHHHHHHHHHHHhHHhcC-ccchhhHHHHHHHHHHHHH
Confidence 99999999999999999999996421 11 12 223499999999999999996 4555668877655543
Q ss_pred -------HHhCCCCChhHHHHHHHHHHHHhCCCCcccc-ccCCCcHHHHHHHHHHhcCC
Q 009767 149 -------LTTNSQLVPRLRFMIHDVLDLRANNWVPRRE-EMKAKTITEIHSEAEKNLGL 199 (526)
Q Consensus 149 -------l~~~~~ls~Rirfmi~dvidlR~~~W~~r~~-~~~pkti~~i~~e~~~~~~~ 199 (526)
+.++..+|+||||||+||+|+|++||+.++. +++|+++++||++...++|+
T Consensus 188 ~~~~~~~~~~~~~lp~ri~f~i~dll~lr~~~wk~~~~~~E~~~~l~ei~k~~~~~l~~ 246 (248)
T d1uw4b_ 188 WKKSLEVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGL 246 (248)
T ss_dssp HHHTSTTCCSSSCCCHHHHHHHHHHHHHHCTTCCCCSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHHHhCCCCcCCChhhhHHHHHHHHHHHHHhhCC
Confidence 2335679999999999999999999986554 67899999999999888764
No 5
>d1h2vc1 a.118.1.14 (C:29-290) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.10 E-value=5.5e-06 Score=79.96 Aligned_cols=142 Identities=14% Similarity=0.221 Sum_probs=100.8
Q ss_pred CHHHHHHHHhhhCCCCCCCCCCCcchhHHHHHHHHHHHHHhcccccHHHHhcCCChHHHHHHHHHHHHHHhhhhhhHHHH
Q 009767 1 MYALLCSDLNEKLPPFPSDEPGGKDITFKRILLNHCQEAFEGADNTRAEIRQMTAPEQEMERMDQERLVKLRTLGNIRLI 80 (526)
Q Consensus 1 mYA~LC~~L~~~~~~~~~~~~~~~~~~Fr~~LL~~cQ~eFe~~~~~~~~~~~~~~~e~e~e~~~~~~~~K~r~lGnirFI 80 (526)
+||.|+.-++.. ...|-..++.+|.+.|+..-+ +. .+++....++||
T Consensus 57 ~yA~Lv~llN~~------------~~e~g~~~l~~~~~~f~~~l~------~~---------------~~~~~~~llrFl 103 (262)
T d1h2vc1 57 IYTTLVGLLNAR------------NYNFGGEFVEAMIRQLKESLK------AN---------------NYNEAVYLVRFL 103 (262)
T ss_dssp HHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHHHH------TT---------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHccC------------cHHHHHHHHHHHHHHHHHHHH------hC---------------CHHHHHHHHHHH
Confidence 477777666543 346888899999888886421 10 123455789999
Q ss_pred HHHhcCCCCCHHHHHHHHHHHHhcCCC-CCC---ChhhHHHHHHHHHHHhhhhhcCCcchhhHHHHHHHHHHHHhCC---
Q 009767 81 GELLKQKMVPEKIVHHIVQELLENDGK-TCP---AEENVEAICQFFNTIGKQLDENPKSRRVNDVYFSRLKELTTNS--- 153 (526)
Q Consensus 81 GELfk~~~l~e~ii~~ci~~Ll~~~~~-~~p---~ee~iE~lc~LL~tiG~~Ld~~~~~~~~~d~~f~~l~~l~~~~--- 153 (526)
++||+.++++...|..|+..|+..... ..| .|+-+.|+...|--||+.|.+. ....++.+++.++.++++.
T Consensus 104 a~L~n~~Vv~~~~i~~ll~~ll~~~~e~~~~~~~~d~~~~~vL~~LP~~g~~l~~~--~~~~~~~ll~~i~~y~~~r~~~ 181 (262)
T d1h2vc1 104 SDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYEK--KDAEMDRIFANTESYLKRRQKT 181 (262)
T ss_dssp HHHHHTTSBCHHHHHHHHHHHHHGGGCSSCCHHHHHHHHHHHHTTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTCCCT
T ss_pred HHHccCCCCcHhHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999975311 111 2345777777777899999752 2345788888887754321
Q ss_pred --------------CCChhHHHHHHHHHHHHhCCCCcc
Q 009767 154 --------------QLVPRLRFMIHDVLDLRANNWVPR 177 (526)
Q Consensus 154 --------------~ls~Rirfmi~dvidlR~~~W~~r 177 (526)
.....+-.+...+-.+|+++|..+
T Consensus 182 ~~~ll~~~~~~~~~~~~~~l~~l~~qi~~l~~~~w~~~ 219 (262)
T d1h2vc1 182 HVPMLQVWTADKPHPQEEYLDCLWAQIQKLKKDRWQER 219 (262)
T ss_dssp THHHHCSBCCCSSCCCCBHHHHHHHHHHHHHHTTTCCS
T ss_pred chhhhhccccCCCCcHHHHHHHHHHHHHHHHhcCCchh
Confidence 123578888889999999999864
No 6
>d1h2vc1 a.118.1.14 (C:29-290) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.29 E-value=51 Score=29.49 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=56.9
Q ss_pred HhcCCC-cChHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhcchhhhcCCCchhHHHHHHHHHHHHcCCCChHHHHHHHHh
Q 009767 405 ALEKIP-PCVEPVIQLLEFLLNKNVLTTRDIGTGCLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVLKEVLKK 483 (526)
Q Consensus 405 aLE~~~-~~re~v~~LL~~L~~~~~ls~~q~~~Gf~~vl~~l~Dl~iDiP~a~~~la~~iar~i~~~~l~~~~i~~~~~~ 483 (526)
++++++ .+...+..+|.+|+..++++...+.+=|..+++.+.| .|+|... +.+++.+|... +.++..-+.+
T Consensus 87 ~l~~~~~~~~~~llrFla~L~n~~Vv~~~~i~~ll~~ll~~~~e--~~~~~~~---~d~~~~~vL~~---LP~~g~~l~~ 158 (262)
T d1h2vc1 87 SLKANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQE--EDVPQVR---RDWYVYAFLSS---LPWVGKELYE 158 (262)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTTSBCHHHHHHHHHHHHHGGGC--SSCCHHH---HHHHHHHHHTT---HHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHccCCCCcHhHHHHHHHHHHHHHhh--ccCCchh---HHHHHHHHHHH---HHHHHHHHHh
Confidence 444443 3345778999999999999999999999999998766 4677554 56666666533 3444322222
Q ss_pred hhchhHHHHHHHHHHHHHhcC
Q 009767 484 VEDNMFRRSIFTAAMKSIQSS 504 (526)
Q Consensus 484 ~~~~~~~~~~l~~~l~~l~~~ 504 (526)
-.+.. ..+++.++...++.+
T Consensus 159 ~~~~~-~~~ll~~i~~y~~~r 178 (262)
T d1h2vc1 159 KKDAE-MDRIFANTESYLKRR 178 (262)
T ss_dssp HHHHH-HHHHHHHHHHHHHTC
T ss_pred cCHHH-HHHHHHHHHHHHHhc
Confidence 22222 244555554444433
No 7
>d1ls1a1 a.24.13.1 (A:1-88) Signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=39.64 E-value=44 Score=25.09 Aligned_cols=57 Identities=12% Similarity=0.080 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHhhcchhhhcCCCchhHHHHHHHHHHHHcCC
Q 009767 415 PVIQLLEFLLNKNVLTTRDIGTGCLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKS 471 (526)
Q Consensus 415 ~v~~LL~~L~~~~~ls~~q~~~Gf~~vl~~l~Dl~iDiP~a~~~la~~iar~i~~~~ 471 (526)
.+...|..|..++.|+.+++..++.++-..|=+-.+.+|-+.+++..+-.+++-...
T Consensus 8 ~l~~a~~~l~g~~~i~E~~i~~~l~eir~ALLeADV~l~vvk~f~~~ik~k~~g~~v 64 (88)
T d1ls1a1 8 RLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVREEALGKQV 64 (88)
T ss_dssp HHHHHHHTTTTSCSCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHHhHHHh
Confidence 455667778888999999999999999999999999999999999999988887654
No 8
>d1w53a_ a.186.1.2 (A:) Phosphoserine phosphatase RsbU, N-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=39.08 E-value=67 Score=23.94 Aligned_cols=23 Identities=13% Similarity=0.132 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHH
Q 009767 358 LADLRKKTVSLLEEYFSIRILDE 380 (526)
Q Consensus 358 ~eel~kk~~~il~EY~~~~D~~E 380 (526)
.|+++++-+.+|++|+.++|...
T Consensus 4 ~e~~~~~Y~~iL~~Yl~~~~E~~ 26 (84)
T d1w53a_ 4 REVIEQRYHQLLSRYIAELTETS 26 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHH
Confidence 47899999999999999999543
No 9
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=36.74 E-value=98 Score=24.79 Aligned_cols=91 Identities=13% Similarity=0.161 Sum_probs=60.3
Q ss_pred hhHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCChhh----HHHHHHHHHHHhhhhhcCCcchhhHHHHHHHHHHHH
Q 009767 75 GNIRLIGELLKQKMVPEKIVHHIVQELLENDGKTCPAEEN----VEAICQFFNTIGKQLDENPKSRRVNDVYFSRLKELT 150 (526)
Q Consensus 75 GnirFIGELfk~~~l~e~ii~~ci~~Ll~~~~~~~p~ee~----iE~lc~LL~tiG~~Ld~~~~~~~~~d~~f~~l~~l~ 150 (526)
+.|.-|+++.+.+=...+....+|+.-|... +... |+.|=.+++.||..+...-..+.+++ .|..+.
T Consensus 24 ~~il~icD~I~~~~~~~k~a~ral~krl~~~-----n~~v~l~aL~LLd~~vkNcG~~f~~~i~s~~fl~----~l~~l~ 94 (145)
T d1dvpa1 24 PSILLICDEINQKDVTPKNAFAAIKKKMNSP-----NPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCE----MFSSFL 94 (145)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHTCS-----SHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHH----HHHHHH
T ss_pred HHHHHHHHHHhCCCccHHHHHHHHHHHHcCC-----CHHHHHHHHHHHHHHHHccchHHHHHHhhHHHHH----HHHHHh
Confidence 5677888999888777777777777777652 3333 34444556677888875433344444 444444
Q ss_pred hCCCCChhHHHHHHHHHHHHhCCCC
Q 009767 151 TNSQLVPRLRFMIHDVLDLRANNWV 175 (526)
Q Consensus 151 ~~~~ls~Rirfmi~dvidlR~~~W~ 175 (526)
. +..+..|+-.|..+|+.....+.
T Consensus 95 ~-~~~~~~Vk~kil~li~~W~~~f~ 118 (145)
T d1dvpa1 95 E-STPHENVRQKMLELVQTWAYAFR 118 (145)
T ss_dssp H-HCSCHHHHHHHHHHHHHHHHHTT
T ss_pred c-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 3 35578899999999998776554
No 10
>d1sxjc1 a.80.1.1 (C:239-333) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.69 E-value=60 Score=24.01 Aligned_cols=50 Identities=16% Similarity=0.056 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHhcCCCcChHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhcch
Q 009767 394 HPEVVKEAIALALEKIPPCVEPVIQLLEFLLNKNVLTTRDIGTGCLLYGSLLD 446 (526)
Q Consensus 394 ~~~~V~~~I~~aLE~~~~~re~v~~LL~~L~~~~~ls~~q~~~Gf~~vl~~l~ 446 (526)
||+.|..++...+.++ -.-.-+.+..|....-++..|+...|.+++-..+
T Consensus 2 ~P~~I~~il~~~l~~~---f~~a~~~l~~l~~~~G~s~~dIl~~l~~~i~~~~ 51 (95)
T d1sxjc1 2 RPSDLKAVLKSILEDD---WGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYE 51 (95)
T ss_dssp CHHHHHHHHHHHHTSC---HHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC
Confidence 5778888888888643 3455666667776677999999999988876654
No 11
>d2jm6b1 f.1.4.1 (B:147-308) EAT/MCL-1 (Myeloid cell leukemia sequence 1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.34 E-value=31 Score=28.72 Aligned_cols=20 Identities=15% Similarity=0.368 Sum_probs=17.3
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 009767 354 TKLNLADLRKKTVSLLEEYF 373 (526)
Q Consensus 354 ~~~s~eel~kk~~~il~EY~ 373 (526)
|.-++|++......|+..|+
T Consensus 2 p~~~~d~l~~~t~~l~~~y~ 21 (162)
T d2jm6b1 2 PLGSEDDLYRQSLEIISRYL 21 (162)
T ss_dssp CSSSCHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHH
Confidence 44577999999999999998
No 12
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.67 E-value=32 Score=28.08 Aligned_cols=106 Identities=10% Similarity=0.087 Sum_probs=60.8
Q ss_pred hhHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCCh--hhHHHHHHHHHHHhhhhhcCCcchhhHHHHHHHHHHHHhC
Q 009767 75 GNIRLIGELLKQKMVPEKIVHHIVQELLENDGKTCPAE--ENVEAICQFFNTIGKQLDENPKSRRVNDVYFSRLKELTTN 152 (526)
Q Consensus 75 GnirFIGELfk~~~l~e~ii~~ci~~Ll~~~~~~~p~e--e~iE~lc~LL~tiG~~Ld~~~~~~~~~d~~f~~l~~l~~~ 152 (526)
+.|..|+++.+.+-...+....+|+.=|.+. +|.+ -.+.-|=.+++.||..+...-..+. +.+.|..++..
T Consensus 20 ~~il~icD~I~~~~~~~k~a~ral~krl~~~---n~~~~l~aL~LLe~~vkNcG~~fh~evask~----Fl~~l~~li~~ 92 (143)
T d1mhqa_ 20 SAIQNFCEQVNTDPNGPTHAPWLLAHKIQSP---QEKEALYALTVLEMCMNHCGEKFHSEVAKFR----FLNELIKVLSP 92 (143)
T ss_dssp HHHHHHHHHHHHSSHHHHHHHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHSCHHHHHHHTSHH----HHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHcCHHHHHHHhhHH----HHHHHHHHHcc
Confidence 4666777877766444444444454445432 1211 2333444556677888875333334 45556666543
Q ss_pred ----CCCChhHHHHHHHHHHHHhCCCCccccccCCCcHHHHHHHH
Q 009767 153 ----SQLVPRLRFMIHDVLDLRANNWVPRREEMKAKTITEIHSEA 193 (526)
Q Consensus 153 ----~~ls~Rirfmi~dvidlR~~~W~~r~~~~~pkti~~i~~e~ 193 (526)
+..+..|+-.|..+|......+. ..|+ +.+.+++-
T Consensus 93 k~~~~~~~~~Vk~kil~li~~Wa~~f~-----~~~~-~~~~y~~L 131 (143)
T d1mhqa_ 93 KYLGSWATGKVKGRVIEILFSWTVWFP-----EDIK-IRDAYQML 131 (143)
T ss_dssp STTSCCCCHHHHHHHHHHHHHHHHHCT-----TCHH-HHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHcC-----CCch-HHHHHHHH
Confidence 46788899999999987765542 1232 66666544
No 13
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.87 E-value=67 Score=26.01 Aligned_cols=91 Identities=13% Similarity=0.182 Sum_probs=53.8
Q ss_pred hhHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHH----HHHhhhhhcCCcchhhHHHHHHHHHHHH
Q 009767 75 GNIRLIGELLKQKMVPEKIVHHIVQELLENDGKTCPAEENVEAICQFF----NTIGKQLDENPKSRRVNDVYFSRLKELT 150 (526)
Q Consensus 75 GnirFIGELfk~~~l~e~ii~~ci~~Ll~~~~~~~p~ee~iE~lc~LL----~tiG~~Ld~~~~~~~~~d~~f~~l~~l~ 150 (526)
+.|--|+++.+..-...+....+|+.=|.+ .+....-....|| +.||..+...-..+.++ +.|..++
T Consensus 27 ~~ileicD~I~~~~~~~k~a~r~l~krl~~-----~~~~~~l~aL~LLe~~vkNCG~~f~~evas~~Fl----~~L~kli 97 (145)
T d1ujka_ 27 ASINGFCEQLNEDFEGPPLATRLLAHKIQS-----PQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFL----NELIKVV 97 (145)
T ss_dssp HHHHHHHHHHTSSTTHHHHHHHHHHHHHTC-----SSHHHHHHHHHHHHHHHTSCCHHHHHHHTSHHHH----HHHHHHH
T ss_pred HHHHHHHHHHhCCCccHHHHHHHHHHHHcC-----CCHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHH----HHHHHHH
Confidence 567778888887766555555555554544 2333333334444 45578776433344444 4455555
Q ss_pred hC----CCCChhHHHHHHHHHHHHhCCC
Q 009767 151 TN----SQLVPRLRFMIHDVLDLRANNW 174 (526)
Q Consensus 151 ~~----~~ls~Rirfmi~dvidlR~~~W 174 (526)
.. ...+.-|+-.|..+|......+
T Consensus 98 ~~k~~~~~~~~~Vk~kil~li~~W~~~f 125 (145)
T d1ujka_ 98 SPKYLGSRTSEKVKNKILELLYSWTVGL 125 (145)
T ss_dssp CTTTTGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHC
Confidence 42 3567788888888888765444
No 14
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.90 E-value=44 Score=27.46 Aligned_cols=95 Identities=7% Similarity=0.059 Sum_probs=55.1
Q ss_pred hHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCCh--hhHHHHHHHHHHHhhhhhcCCcchhhHHHHHHHHHHHHhCC
Q 009767 76 NIRLIGELLKQKMVPEKIVHHIVQELLENDGKTCPAE--ENVEAICQFFNTIGKQLDENPKSRRVNDVYFSRLKELTTNS 153 (526)
Q Consensus 76 nirFIGELfk~~~l~e~ii~~ci~~Ll~~~~~~~p~e--e~iE~lc~LL~tiG~~Ld~~~~~~~~~d~~f~~l~~l~~~~ 153 (526)
.|--||++.+.+=...+....+|++=|.+. .+|.. -.|+.|=.+++.||..+...-..+.+|+.+. .+.+....
T Consensus 32 ~il~icD~In~~~~~~k~a~ral~krL~~~--~n~~v~l~aL~LLe~~vkNCG~~fh~evas~~Fl~~ll--~~~~~~~~ 107 (153)
T d1elka_ 32 LNMEICDIINETEEGPKDALRAVKKRIVGN--KNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVL--VRTILPKN 107 (153)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHT--HHHHSTTT
T ss_pred HHHHHHHHHhCCCcCHHHHHHHHHHHHccC--CCHHHHHHHHHHHHHHHHHccHHHHHHHhhHHHHHHHH--HHHhccCC
Confidence 455588888877655555444454433221 11211 2345555667778988875434445555432 12233456
Q ss_pred CCChhHHHHHHHHHHHHhCCC
Q 009767 154 QLVPRLRFMIHDVLDLRANNW 174 (526)
Q Consensus 154 ~ls~Rirfmi~dvidlR~~~W 174 (526)
..+..|+-.|..+|+.....+
T Consensus 108 ~~~~~Vk~kil~li~~W~~~f 128 (153)
T d1elka_ 108 NPPTIVHDKVLNLIQSWADAF 128 (153)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHh
Confidence 778889999999998876433
No 15
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.96 E-value=87 Score=25.43 Aligned_cols=91 Identities=7% Similarity=0.157 Sum_probs=52.8
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCC--hhhHHHHHHHHHHHhhhhhcCCcchhhHHHHHHHHHHHHhC--
Q 009767 77 IRLIGELLKQKMVPEKIVHHIVQELLENDGKTCPA--EENVEAICQFFNTIGKQLDENPKSRRVNDVYFSRLKELTTN-- 152 (526)
Q Consensus 77 irFIGELfk~~~l~e~ii~~ci~~Ll~~~~~~~p~--ee~iE~lc~LL~tiG~~Ld~~~~~~~~~d~~f~~l~~l~~~-- 152 (526)
|-=|+++.+..-...+....+|..=|.+. +|. --.+..|=.+++.||..+...-..+. +.+.|..++..
T Consensus 23 ileicD~In~~~~~~k~a~rai~krl~~~---~~~~~l~aL~LLe~~vkNCG~~F~~evask~----Fl~~l~kli~~k~ 95 (151)
T d1juqa_ 23 IIGFCDQINKELEGPQIAVRLLAHKIQSP---QEWEALQALTVLEACMKNCGRRFHNEVGKFR----FLNELIKVVSPKY 95 (151)
T ss_dssp HHHHHHHHHHSTTHHHHHHHHHHHHHTCS---SHHHHHHHHHHHHHHHHHSHHHHHHHHTSHH----HHHHHHHHHCCCC
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHccHHHHHHHhhHH----HHHHHHHHHcccC
Confidence 33377777766544444444444444431 121 12344444566677998875333344 44456665543
Q ss_pred --CCCChhHHHHHHHHHHHHhCCC
Q 009767 153 --SQLVPRLRFMIHDVLDLRANNW 174 (526)
Q Consensus 153 --~~ls~Rirfmi~dvidlR~~~W 174 (526)
+..+..|+-.|..++......+
T Consensus 96 ~~~~~~~~Vk~kil~ll~~Wa~~f 119 (151)
T d1juqa_ 96 LGDRVSEKVKTKVIELLYSWTMAL 119 (151)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHC
T ss_pred CCCcccHHHHHHHHHHHHHHHHHc
Confidence 4578889999999999876655
No 16
>d1sxjb1 a.80.1.1 (B:231-322) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.47 E-value=1.2e+02 Score=22.06 Aligned_cols=47 Identities=30% Similarity=0.264 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHhcCCCcChHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhcch
Q 009767 394 HPEVVKEAIALALEKIPPCVEPVIQLLEFLLNKNVLTTRDIGTGCLLYGSLLD 446 (526)
Q Consensus 394 ~~~~V~~~I~~aLE~~~~~re~v~~LL~~L~~~~~ls~~q~~~Gf~~vl~~l~ 446 (526)
||+.|+.+|. .. +-.-..+.+..+....-++..|+...|.+++-.++
T Consensus 2 ~P~~I~~il~----~~--~f~~a~~~l~~~l~~~Gys~~DIi~~l~~~i~~~~ 48 (92)
T d1sxjb1 2 HPLIVKKMLL----AS--NLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLA 48 (92)
T ss_dssp CHHHHHHHHS----CS--SHHHHHHHHHHTTTTTTCCHHHHHHHHHHHHHTCT
T ss_pred CHHHHHHHHH----hC--CHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcc
Confidence 5677776652 11 22234444444444456888888888888776553
No 17
>d1wgwa_ a.24.13.1 (A:) Signal recognition particle 54 kDa protein, SRP54 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.79 E-value=45 Score=25.57 Aligned_cols=80 Identities=9% Similarity=0.094 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHhhcchhhhcCCCchhHHHHHHHHHHHHcCCCChHHHHHHHHhhhchhHHHHH
Q 009767 414 EPVIQLLEFLLNKNVLTTRDIGTGCLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVLKEVLKKVEDNMFRRSI 493 (526)
Q Consensus 414 e~v~~LL~~L~~~~~ls~~q~~~Gf~~vl~~l~Dl~iDiP~a~~~la~~iar~i~~~~l~~~~i~~~~~~~~~~~~~~~~ 493 (526)
+.+...|..|..++.|+.+++...+.++-..|=+-.+.++-+.++...+-.+++.....+--- ....+++.|
T Consensus 12 ~~i~~a~~~l~~~~~i~E~~I~~~l~eI~~ALLeADVn~~vV~~f~~~Ik~k~~~~~~~~g~n--------~~q~i~kiV 83 (99)
T d1wgwa_ 12 RKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLN--------KRKMIQHAV 83 (99)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTSCCSSCCCCHH--------HHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhccccccCCC--------HHHHHHHHH
Confidence 355667788889999999999999999998888888888888877776665554443332110 123455666
Q ss_pred HHHHHHHH
Q 009767 494 FTAAMKSI 501 (526)
Q Consensus 494 l~~~l~~l 501 (526)
+.++.+.+
T Consensus 84 ~dELv~ll 91 (99)
T d1wgwa_ 84 FKELVKVK 91 (99)
T ss_dssp HHHHHHSS
T ss_pred HHHHHHHc
Confidence 66666554
No 18
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.86 E-value=85 Score=30.80 Aligned_cols=141 Identities=20% Similarity=0.245 Sum_probs=69.1
Q ss_pred HHHHHHHhcCCCHH---HHHHHHHHhCC--CCChHHHHHHHHHHHhcCCCcChHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 009767 366 VSLLEEYFSIRILD---EALQCVEELRA--PTYHPEVVKEAIALALEKIPPCVEPVIQLLEFLLNKNVLTTRDIGTGCLL 440 (526)
Q Consensus 366 ~~il~EY~~~~D~~---Ea~~~i~eL~~--p~~~~~~V~~~I~~aLE~~~~~re~v~~LL~~L~~~~~ls~~q~~~Gf~~ 440 (526)
-.-|.+|....|.+ +|+.+|..+.. +.....+|..++...-+..+..++.+...+..++... ++.....+..
T Consensus 352 l~eL~~y~~~~d~~~~~~ai~aI~~la~~~~~~~~~~i~~Ll~ll~~~~~~v~~e~i~~i~~i~~~~---p~~~~~ii~~ 428 (579)
T d2vglb_ 352 LAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKY---PNKYESIIAT 428 (579)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHS---CSSCCTTHHH
T ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhC---hHHHHHHHHH
Confidence 34466777777764 45555555432 2222334444444333333444455555555544321 1112223444
Q ss_pred HhhcchhhhcCCCchhHHHHHHHHHHHHcCCCC--hHHHHHHHHhh--hchhHHHHHHHHHHHHHhcCCC-chhhHHh
Q 009767 441 YGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLD--FIVLKEVLKKV--EDNMFRRSIFTAAMKSIQSSPA-GQEVLAV 513 (526)
Q Consensus 441 vl~~l~Dl~iDiP~a~~~la~~iar~i~~~~l~--~~~i~~~~~~~--~~~~~~~~~l~~~l~~l~~~~~-g~~~~~~ 513 (526)
+.+.+++ +|-|.+...+.-+++... +.++ ...++.+++.+ ++...+..+|.+++|..-..|. ++.++-.
T Consensus 429 L~~~l~~--~~~~~~~~~~iwilGEy~--~~i~~~~~ll~~l~~~f~~e~~~vq~~iLta~~Kl~~~~p~~~~~~~~~ 502 (579)
T d2vglb_ 429 LCENLDS--LDEPDARAAMIWIVGEYA--ERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 502 (579)
T ss_dssp HHHTTTT--CCSHHHHHHHHHHHHTTC--TTCTTHHHHHHHHSTTCSSSCHHHHHHHHHHHHHHHTTCCSTTHHHHHH
T ss_pred HHHHHHh--cCcHHHHHHHHHHHhCcc--cccccHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 4555543 345666665555555431 1222 23333333332 4557788899999997655543 5555443
No 19
>d1ug3a2 a.118.1.14 (A:1438-1564) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.11 E-value=1.7e+02 Score=22.70 Aligned_cols=114 Identities=14% Similarity=0.066 Sum_probs=64.8
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhCCCCC--hHHHHHHHHHHHhcC----C---CcChHHHHHHHHHHHhC
Q 009767 356 LNLADLRKKTVSLLEEYFSIRILDEALQCVEELRAPTY--HPEVVKEAIALALEK----I---PPCVEPVIQLLEFLLNK 426 (526)
Q Consensus 356 ~s~eel~kk~~~il~EY~~~~D~~Ea~~~i~eL~~p~~--~~~~V~~~I~~aLE~----~---~~~re~v~~LL~~L~~~ 426 (526)
++.+++.+.+...|+| ..+.++...-|++.-.+.. .++||..+++..+.. + ....+.+.+ ..-|+.
T Consensus 2 ~~~~~l~~~L~~~l~e---~~~~~~i~~wIk~~~~~~~~~~~~~i~aL~~~v~~~~~~~~~~~~~~~~~l~k-~~~ll~- 76 (127)
T d1ug3a2 2 LPSEELNRQLEKLLKE---GSSNQRVFDWIEANLSEQQIVSNTLVRALMTAVCYSAIIFETPLRVDVAVLKA-RAKLLQ- 76 (127)
T ss_dssp CHHHHHHHHHHHHHHT---TCCHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHHTEECSSSCEECHHHHHH-HHHHHH-
T ss_pred CCHHHHHHHHHHHHHc---CCCHHHHHHHHHHhcccccCCChHHHHHHHHHHHHHHHHccCcHHHHHHHHHH-HHHHHH-
Confidence 3456676666666653 5788999999998765532 478888777665542 1 122333332 122333
Q ss_pred CCCCHHHHHHHHHHHhhcchhhhcCCCchhHHHHHHHHHHHHcCCCChHHH
Q 009767 427 NVLTTRDIGTGCLLYGSLLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVL 477 (526)
Q Consensus 427 ~~ls~~q~~~Gf~~vl~~l~Dl~iDiP~a~~~la~~iar~i~~~~l~~~~i 477 (526)
.+++.++-+. ..|-.+.++..+.++....+..++-.+...+++.-+.|
T Consensus 77 ~~~~~~~~ql---~~L~~lQ~~~~~~~~~~~~~~~i~~~LYd~dvi~Ee~i 124 (127)
T d1ug3a2 77 KYLCDEQKEL---QALYALQALVVTLEQPPNLLRMFFDALYDEDVVKEDAF 124 (127)
T ss_dssp HHCCSHHHHH---HHHHHHHHHHHHTTCCTTHHHHHHHHHHHTTSSCHHHH
T ss_pred HHhCCcHHHH---HHHHHHHHHHHhcccHHHHHHHHHHHHhccccccHHhh
Confidence 2222222111 12222333444556666678888888888888876543
No 20
>d1vi0a2 a.121.1.1 (A:78-194) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=21.45 E-value=1.4e+02 Score=21.75 Aligned_cols=103 Identities=14% Similarity=0.005 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhc--CCCHHHHHHHHHHhCCCC-ChHHHHHHHHHHHhcCCCcChHHHHHHHHHHHhCCCCCH----HHH
Q 009767 362 RKKTVSLLEEYFS--IRILDEALQCVEELRAPT-YHPEVVKEAIALALEKIPPCVEPVIQLLEFLLNKNVLTT----RDI 434 (526)
Q Consensus 362 ~kk~~~il~EY~~--~~D~~Ea~~~i~eL~~p~-~~~~~V~~~I~~aLE~~~~~re~v~~LL~~L~~~~~ls~----~q~ 434 (526)
+.++..+|..||. ..+.+-+.-.+.|+..-. ....-+...+. .-...+..++....+.|.+.+ ..+
T Consensus 3 ~e~L~~~i~~~~~~~~~~~~~~~i~~~E~~~~~~~~~~~i~~~~~-------~~~~~~~~ii~~g~~~G~ir~d~d~~~~ 75 (117)
T d1vi0a2 3 KEKLALVISKHFSLLAGDHNLAIVTQLELRQSNLELRQKINEILK-------GYLNILDGILTEGIQSGEIKEGLDVRLA 75 (117)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCCSHHHHHHHHHHHH-------HHHHHHHHHHHHHHHTTCBCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcchHHhHHHHHhcCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHcCCcccCCCHHHH
Confidence 3456666666664 256666676777774211 11222222222 223577788888888877644 333
Q ss_pred HHHHHHHhhcc--hhhhcCCCchhHHHHHHHHHHHHcCC
Q 009767 435 GTGCLLYGSLL--DDIGIDLPKAPNNFGEMVGKLVVAKS 471 (526)
Q Consensus 435 ~~Gf~~vl~~l--~Dl~iDiP~a~~~la~~iar~i~~~~ 471 (526)
..+|--.++.+ .-+.-+-|...+-++..+...+.+|+
T Consensus 76 a~~i~g~i~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Gl 114 (117)
T d1vi0a2 76 RQMIFGTIDETVTTWVMNDQKYDLVALSNSVLELLVSGI 114 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCSCGGGGHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Confidence 33333332211 12222344444555555555555544
No 21
>d1sd4a_ a.4.5.39 (A:) Penicillinase repressor BlaI {Staphylococcus aureus [TaxId: 1280]}
Probab=21.03 E-value=1.7e+02 Score=22.44 Aligned_cols=91 Identities=11% Similarity=0.120 Sum_probs=56.2
Q ss_pred HHHHHHHHhCCCCChHHHHHHHHHHHhcCCCcChHHHHHHHHHHHhCCCC---------------CHHHHHHHHH-HHhh
Q 009767 380 EALQCVEELRAPTYHPEVVKEAIALALEKIPPCVEPVIQLLEFLLNKNVL---------------TTRDIGTGCL-LYGS 443 (526)
Q Consensus 380 Ea~~~i~eL~~p~~~~~~V~~~I~~aLE~~~~~re~v~~LL~~L~~~~~l---------------s~~q~~~Gf~-~vl~ 443 (526)
++..||=+.. |.. +..++...-+..+-..--+..+|..|.++|+| +.+++..... .+++
T Consensus 10 ~VM~~lW~~~-~~t----~~ei~~~l~~~~~~~~tTv~T~L~rL~~Kg~l~~~~~gr~~~Y~~~v~~~~~~~~~~~~~~~ 84 (122)
T d1sd4a_ 10 DVMNIIWDKK-SVS----ANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRYKSENIYFYSSNIKEDDIKMKTAKTFLN 84 (122)
T ss_dssp HHHHHHHHSS-SEE----HHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCC-CCC----HHHHHHHhhccCCCcHhHHHHHHHHHHhhhceeeeccCCeEEEeecCCHHHHHHHHHHHHHH
Confidence 4555666643 333 33333333344444567888999999999988 6666765554 4555
Q ss_pred cchhhhcCCCchhHHHHHHHHHHHHcCCCChHHHHHHHHhh
Q 009767 444 LLDDIGIDLPKAPNNFGEMVGKLVVAKSLDFIVLKEVLKKV 484 (526)
Q Consensus 444 ~l~Dl~iDiP~a~~~la~~iar~i~~~~l~~~~i~~~~~~~ 484 (526)
.+-+- .+..+++.++.+..++.+.++++-+.+
T Consensus 85 ~~~~g---------s~~~lv~~~~~~~~ls~~el~eL~~~l 116 (122)
T d1sd4a_ 85 KLYGG---------DMKSLVLNFAKNEELNNKEIEELRDIL 116 (122)
T ss_dssp HHHTT---------CHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred HHhCC---------CHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 44221 234578888888899988887664433
Done!