BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009768
         (526 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P93788|REMO_SOLTU Remorin OS=Solanum tuberosum PE=1 SV=1
          Length = 198

 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 6/121 (4%)

Query: 409 LERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI 465
           L R+  EKR S   AW E+EKSK   + +++   I AWE+ +KA LEAE++++E ++E+ 
Sbjct: 81  LARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKK 140

Query: 466 RAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGW 525
           +A+   KM  KI++  + +EEKRA  EA++  D  +        R TG  P       G 
Sbjct: 141 KAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKK---ILGI 197

Query: 526 F 526
           F
Sbjct: 198 F 198


>sp|Q9M2D8|Y3126_ARATH Uncharacterized protein At3g61260 OS=Arabidopsis thaliana
           GN=At3g61260 PE=1 SV=1
          Length = 212

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 74/124 (59%), Gaps = 12/124 (9%)

Query: 409 LERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI 465
           L  +  EKR S   AW E+EKSK   + +++   + AWE+ +KA +EA++++IE ++E+ 
Sbjct: 95  LADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKK 154

Query: 466 RAQAQAKMVKKISMSRQRSEEKRAAAEARKSRD---AERTAAQGEYIRQTGQIPSSHFTC 522
           +A+   +M  K++   + +EE+RA  EA++  D   AE TAA+    R TG +P +    
Sbjct: 155 KAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAK---YRATGIVPKA---T 208

Query: 523 CGWF 526
           CG F
Sbjct: 209 CGCF 212


>sp|O80837|REMO_ARATH Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1
          Length = 190

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 396 NTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEM 455
           ++ SA+++  + +LE+ +      AW E+EKSK   R +++   + AWE+ +KA +EA++
Sbjct: 63  SSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQL 122

Query: 456 RRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQI 515
           R+IE ++E+ +AQ   KM  K++   + +EEKRA  EA+K  +  +    G   R TG +
Sbjct: 123 RKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVV 182

Query: 516 PSSHFTCCGWF 526
           P +    CG F
Sbjct: 183 PKA---TCGCF 190


>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
            (isolate 3D7) GN=PF13_0198 PE=3 SV=1
          Length = 3130

 Score = 40.0 bits (92), Expect = 0.040,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 401  EKNSDMEELERIEYEKRASAWAEAE-KSKHIARFKREE-IKIQAWESRQKAKLEAEMRRI 458
            E+    +E ER+E EK+     E E K +   R ++EE +K Q  E  QK   E E++R 
Sbjct: 2750 EEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQK---EEELKR- 2805

Query: 459  EAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQ 511
              E E++  + Q ++ K+  + RQ  +E+    EA K ++ ER   + E  RQ
Sbjct: 2806 -QEQERLEREKQEQLQKEEELKRQE-QERLQKEEALKRQEQERLQKEEELKRQ 2856



 Score = 33.5 bits (75), Expect = 4.2,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 1/105 (0%)

Query: 407  EELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIR 466
            +E ER+E EK+     E E  K     + ++ K +A + +++ +L+ E      E E++ 
Sbjct: 2703 QEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLE 2762

Query: 467  AQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQ 511
             + Q ++ K+  + RQ  +E+    EA K ++ ER   + E  RQ
Sbjct: 2763 REKQEQLQKEEELKRQE-QERLQKEEALKRQEQERLQKEEELKRQ 2806


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.310    0.123    0.344 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,993,652
Number of Sequences: 539616
Number of extensions: 7729655
Number of successful extensions: 37292
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 1274
Number of HSP's that attempted gapping in prelim test: 31875
Number of HSP's gapped (non-prelim): 4794
length of query: 526
length of database: 191,569,459
effective HSP length: 122
effective length of query: 404
effective length of database: 125,736,307
effective search space: 50797468028
effective search space used: 50797468028
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)