Query 009768
Match_columns 526
No_of_seqs 148 out of 231
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 12:34:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009768.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009768hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oja_B Anopheles plasmodium-re 73.7 35 0.0012 35.6 12.9 48 470-517 539-586 (597)
2 3na7_A HP0958; flagellar bioge 71.0 68 0.0023 30.8 13.4 14 513-526 192-205 (256)
3 2zuo_A MVP, major vault protei 60.3 1.4E+02 0.0049 34.3 15.0 41 419-459 714-754 (861)
4 2eqb_B RAB guanine nucleotide 46.1 1.5E+02 0.005 25.7 12.8 50 424-481 26-75 (97)
5 3mq7_A Bone marrow stromal ant 45.3 1.7E+02 0.0058 26.2 10.3 57 441-497 36-100 (121)
6 3viq_A SWI5-dependent recombin 38.9 1.3E+02 0.0043 26.7 8.3 63 446-508 7-69 (122)
7 3ljm_A Coil Ser L9C; de novo d 35.3 43 0.0015 23.2 3.6 22 442-463 2-25 (31)
8 3oja_A Leucine-rich immune mol 35.3 1.8E+02 0.006 29.7 10.0 62 426-492 412-473 (487)
9 3ni0_A Bone marrow stromal ant 28.5 2.9E+02 0.01 23.9 8.9 48 441-488 29-87 (99)
10 3f1i_H Hepatocyte growth facto 27.0 2.1E+02 0.0072 24.8 7.4 46 456-506 51-96 (98)
11 3vkg_A Dynein heavy chain, cyt 26.2 5.6E+02 0.019 33.8 14.0 65 429-495 1918-1982(3245)
12 3rk3_E Complexin-1; snare prot 23.1 2.9E+02 0.01 22.1 7.1 25 450-474 27-51 (63)
13 3mq9_A Bone marrow stromal ant 22.8 6E+02 0.02 25.6 12.2 16 157-172 137-152 (471)
14 2ocy_A RAB guanine nucleotide 21.5 4.8E+02 0.016 24.0 12.8 38 444-481 70-107 (154)
15 1f5n_A Interferon-induced guan 21.0 8.2E+02 0.028 26.5 13.0 6 167-172 199-204 (592)
16 1kil_E Complexin I snare-compl 20.4 2.2E+02 0.0075 21.9 5.5 22 452-473 26-47 (49)
17 2dfs_A Myosin-5A; myosin-V, in 20.4 1E+03 0.036 27.7 13.8 18 450-467 981-998 (1080)
No 1
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=73.69 E-value=35 Score=35.59 Aligned_cols=48 Identities=8% Similarity=0.122 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCCCC
Q 009768 470 QAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPS 517 (526)
Q Consensus 470 ~EK~~NKLA~a~rkAEEkRA~AEA~r~ee~~Ka~EkA~kiR~TGk~Ps 517 (526)
.+++.+++..++++-++++...++-+.+-....++.-..+.++.+-|.
T Consensus 539 ~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~~~~~ 586 (597)
T 3oja_B 539 TEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKNRNPD 586 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----
T ss_pred hhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 355567777888888887777766666555555566666677766664
No 2
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=71.04 E-value=68 Score=30.79 Aligned_cols=14 Identities=21% Similarity=0.494 Sum_probs=7.8
Q ss_pred CCCCCCCCcccccC
Q 009768 513 GQIPSSHFTCCGWF 526 (526)
Q Consensus 513 Gk~Pss~f~Ccgcf 526 (526)
|-+|-.--.|-|||
T Consensus 192 avv~v~~~~C~GC~ 205 (256)
T 3na7_A 192 SIVTIKKQACGGCF 205 (256)
T ss_dssp SEEECBTTBCTTTC
T ss_pred eEEEeeCCccCCCC
Confidence 33454434567886
No 3
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=60.30 E-value=1.4e+02 Score=34.25 Aligned_cols=41 Identities=29% Similarity=0.228 Sum_probs=19.4
Q ss_pred hhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009768 419 SAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIE 459 (526)
Q Consensus 419 aAWEeAEkaK~~~RyqREEaKI~AWEN~QKAKAEA~mrKiE 459 (526)
+|=|.+-.+|..++.+-|.+.|.+=-+...||++|+-.+||
T Consensus 714 ~aves~g~a~AeA~a~aea~~Ie~ea~v~~a~l~a~a~~i~ 754 (861)
T 2zuo_A 714 MAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIE 754 (861)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhhhcchhHHHHHHHHHHHHHhhHHHHHHHHhhhHHHhhh
Confidence 34444444444444444445554444444444444444444
No 4
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=46.09 E-value=1.5e+02 Score=25.68 Aligned_cols=50 Identities=20% Similarity=0.276 Sum_probs=38.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009768 424 AEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSR 481 (526)
Q Consensus 424 AEkaK~~~RyqREEaKI~AWEN~QKAKAEA~mrKiE~KLEkkRA~a~EK~~NKLA~a~ 481 (526)
.|..++..++.+ |..++..||.+..+|+.+||-.=+.+++.-.+-++.++
T Consensus 26 ~e~~~L~~~l~e--------E~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar 75 (97)
T 2eqb_B 26 DEVKRLREDIAK--------ENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADAR 75 (97)
T ss_dssp HHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555554 45678999999999999999999999998777666663
No 5
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=45.35 E-value=1.7e+02 Score=26.22 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009768 441 QAWESRQKAKLEAE-----MRRIEAEVEQIRAQ---AQAKMVKKISMSRQRSEEKRAAAEARKSR 497 (526)
Q Consensus 441 ~AWEN~QKAKAEA~-----mrKiE~KLEkkRA~---a~EK~~NKLA~a~rkAEEkRA~AEA~r~e 497 (526)
++||.+..+.|+|. +..|-.-|+++++. -++++..+|....++-+++-+.+|..|.+
T Consensus 36 qAQe~l~~~eaQAaTCNqTV~tL~~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~ 100 (121)
T 3mq7_A 36 EAQKGFQDVEAQAATANHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRE 100 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 56666666666654 33444455555554 35667777777777777776666665544
No 6
>3viq_A SWI5-dependent recombination DNA repair protein 1; recombination activator; 2.20A {Schizosaccharomyces pombe}
Probab=38.92 E-value=1.3e+02 Score=26.73 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 009768 446 RQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEY 508 (526)
Q Consensus 446 ~QKAKAEA~mrKiE~KLEkkRA~a~EK~~NKLA~a~rkAEEkRA~AEA~r~ee~~Ka~EkA~k 508 (526)
.++++.+.+++.++.+|+..+....=+-.|+.+.+...-..||.....--.+=-..+.++...
T Consensus 7 ~~~~~L~~~i~~l~~~L~~lkqa~k~~~~~~~~eL~~LI~KWr~asq~aaeeLf~~~~~rv~r 69 (122)
T 3viq_A 7 SRRLKLEKEVRNLQEQLITAETARKVEAKNEDKDLQTLIQKWKNAAQQAAEVLFKPMAERIRL 69 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 357788899999999999999888888888888888888888887776655555555555543
No 7
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=35.32 E-value=43 Score=23.17 Aligned_cols=22 Identities=36% Similarity=0.755 Sum_probs=13.2
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHH
Q 009768 442 AWESRQK--AKLEAEMRRIEAEVE 463 (526)
Q Consensus 442 AWEN~QK--AKAEA~mrKiE~KLE 463 (526)
.||.+.| |..|.+++-+|.|||
T Consensus 2 ewealekkcaalesklqalekkle 25 (31)
T 3ljm_A 2 EWEALEKKCAALESKLQALEKKLE 25 (31)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3666555 345666666666665
No 8
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=35.28 E-value=1.8e+02 Score=29.71 Aligned_cols=62 Identities=10% Similarity=0.080 Sum_probs=31.1
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009768 426 KSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAE 492 (526)
Q Consensus 426 kaK~~~RyqREEaKI~AWEN~QKAKAEA~mrKiE~KLEkkRA~a~EK~~NKLA~a~rkAEEkRA~AE 492 (526)
..+...+|+.+.++.+. .+.+++..++++..+.++.|. -.++++..|..+...-+++++...
T Consensus 412 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 473 (487)
T 3oja_A 412 LRAIVKRYEEMYVEQQS----VQNNAIRDWDMYQHKETQLAE-ENARLKKLNGEADLALASANATLQ 473 (487)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----HhhcchhhhhhhhhHHHHHHH-HhhhhhhhhhhhhhhhHhcccHHH
Confidence 34555566655555443 333355555555555554444 334455555555555555554433
No 9
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=28.50 E-value=2.9e+02 Score=23.95 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH
Q 009768 441 QAWESRQKAKLEAE-----MRRIEAEVEQIRAQA------QAKMVKKISMSRQRSEEKR 488 (526)
Q Consensus 441 ~AWEN~QKAKAEA~-----mrKiE~KLEkkRA~a------~EK~~NKLA~a~rkAEEkR 488 (526)
+||+.+..+.|+|. +-.|-.-|+++++.. ++++..+|....++-++++
T Consensus 29 ~Aq~~l~~~eaQAaTCNqTV~tL~~SL~kekaq~q~qq~~v~elqgEI~~Lnq~Lqda~ 87 (99)
T 3ni0_A 29 RTQDSLLQAETQANSCNLTVVTLQESLEKKVSQALEQQARIKELENEVTKLNQELENLR 87 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57777777776665 344445566666554 5666677777777666665
No 10
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=26.98 E-value=2.1e+02 Score=24.82 Aligned_cols=46 Identities=15% Similarity=0.212 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 009768 456 RRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQG 506 (526)
Q Consensus 456 rKiE~KLEkkRA~a~EK~~NKLA~a~rkAEEkRA~AEA~r~ee~~Ka~EkA 506 (526)
-+.-.++|.+|. +.|.++.||+.|+ ++|++..+-|.++..|....|
T Consensus 51 l~~i~~~ee~R~-~yE~LQDkL~qi~----eAR~ALdaLR~eH~~Klrr~a 96 (98)
T 3f1i_H 51 LELLNQLDERRL-YYEGLQDKLAQIR----DARGALSALREEHREKLRRAA 96 (98)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHh
Confidence 333445555554 4578899998775 778888888888877776655
No 11
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=26.23 E-value=5.6e+02 Score=33.77 Aligned_cols=65 Identities=17% Similarity=0.175 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009768 429 HIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARK 495 (526)
Q Consensus 429 ~~~RyqREEaKI~AWEN~QKAKAEA~mrKiE~KLEkkRA~a~EK~~NKLA~a~rkAEEkRA~AEA~r 495 (526)
-..||+.=..||..= +.|.++.+.++..++.+|+++...+ ++++.+|..-+..|+++++.+++.+
T Consensus 1918 ~~~rl~~GL~KL~et-~~~V~~l~~~L~~~~~~L~~k~~ea-~~~l~~i~~~~~~ae~~k~~v~~~~ 1982 (3245)
T 3vkg_A 1918 EQLHLNIGLKKLRDT-EAQVKDLQVSLAQKNRELDVKNEQA-NQKLKQMVQDQQAAEIKQKDARELQ 1982 (3245)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344454444444432 3445555666666666777665544 5566777777778888776665443
No 12
>3rk3_E Complexin-1; snare proteins, membrane fusion, membrane protein-exocytosis transport protein complex, membrane protein-exocytosis COMP; 3.50A {Homo sapiens} PDB: 3rl0_g
Probab=23.14 E-value=2.9e+02 Score=22.11 Aligned_cols=25 Identities=28% Similarity=0.347 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 009768 450 KLEAEMRRIEAEVEQIRAQAQAKMV 474 (526)
Q Consensus 450 KAEA~mrKiE~KLEkkRA~a~EK~~ 474 (526)
+-.++-+|+|.+-|+||..+-+||-
T Consensus 27 ~Rk~Kh~kME~ERE~mRQ~IRdKY~ 51 (63)
T 3rk3_E 27 ERKAKYAKMEAEREAVRQGIRDKYG 51 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3345667888888999988887764
No 13
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=22.80 E-value=6e+02 Score=25.62 Aligned_cols=16 Identities=13% Similarity=0.308 Sum_probs=12.1
Q ss_pred CCCCCCchhHHHhhhh
Q 009768 157 RPMPSKWNDAEKWIMN 172 (526)
Q Consensus 157 rp~PSKWdDAeKWI~~ 172 (526)
...|.-|||=..+..-
T Consensus 137 ~~~P~Twdel~~~a~~ 152 (471)
T 3mq9_A 137 PNPPKTWEEIPALDKE 152 (471)
T ss_dssp SSCCSBGGGHHHHHHH
T ss_pred cCCCCCHHHHHHHHHH
Confidence 3578999998876554
No 14
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=21.48 E-value=4.8e+02 Score=24.03 Aligned_cols=38 Identities=24% Similarity=0.336 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009768 444 ESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSR 481 (526)
Q Consensus 444 EN~QKAKAEA~mrKiE~KLEkkRA~a~EK~~NKLA~a~ 481 (526)
|..++..||.+..++|.+||-.=+.+++.-.+=++.++
T Consensus 70 E~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar 107 (154)
T 2ocy_A 70 ENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADAR 107 (154)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999998777666553
No 15
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=20.99 E-value=8.2e+02 Score=26.54 Aligned_cols=6 Identities=0% Similarity=0.490 Sum_probs=2.9
Q ss_pred HHhhhh
Q 009768 167 EKWIMN 172 (526)
Q Consensus 167 eKWI~~ 172 (526)
+.||-+
T Consensus 199 ~eyLe~ 204 (592)
T 1f5n_A 199 DEYLTY 204 (592)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 445544
No 16
>1kil_E Complexin I snare-complex binding region; helix bound to four helix bundle, membrane protein; 2.30A {Rattus norvegicus} SCOP: h.1.15.1
Probab=20.41 E-value=2.2e+02 Score=21.87 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 009768 452 EAEMRRIEAEVEQIRAQAQAKM 473 (526)
Q Consensus 452 EA~mrKiE~KLEkkRA~a~EK~ 473 (526)
.++-+|+|.+-|+||..+-+||
T Consensus 26 k~Kh~kmE~eRE~mRq~IRdKY 47 (49)
T 1kil_E 26 KAKYAKMEAEREVMRQGIRDKY 47 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 4556788888899998877776
No 17
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=20.41 E-value=1e+03 Score=27.67 Aligned_cols=18 Identities=11% Similarity=0.346 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009768 450 KLEAEMRRIEAEVEQIRA 467 (526)
Q Consensus 450 KAEA~mrKiE~KLEkkRA 467 (526)
+++++++.++.+++..+.
T Consensus 981 ~~~~~v~~L~~e~~~l~~ 998 (1080)
T 2dfs_A 981 NATNRVLSLQEEIAKLRK 998 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444555555555544443
Done!