Query 009771
Match_columns 526
No_of_seqs 597 out of 5268
Neff 9.8
Searched_HMMs 46136
Date Thu Mar 28 17:08:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009771.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009771hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.6E-58 3.5E-63 521.8 34.0 368 33-408 27-440 (968)
2 PLN00113 leucine-rich repeat r 100.0 4.5E-41 9.7E-46 379.9 25.1 334 99-433 138-488 (968)
3 KOG4194 Membrane glycoprotein 100.0 1E-33 2.2E-38 276.1 5.2 332 94-433 95-429 (873)
4 KOG4194 Membrane glycoprotein 100.0 1.8E-33 3.8E-38 274.4 6.7 325 101-433 78-405 (873)
5 KOG0444 Cytoskeletal regulator 100.0 1.6E-33 3.4E-38 276.6 -4.0 338 77-431 33-373 (1255)
6 KOG0444 Cytoskeletal regulator 100.0 6.8E-32 1.5E-36 265.1 -5.3 342 77-433 8-352 (1255)
7 KOG0472 Leucine-rich repeat pr 100.0 8.2E-31 1.8E-35 245.5 -6.6 329 94-433 84-541 (565)
8 KOG0472 Leucine-rich repeat pr 99.9 8.2E-30 1.8E-34 238.8 -9.1 304 94-409 107-541 (565)
9 PLN03210 Resistant to P. syrin 99.9 2.4E-24 5.2E-29 244.6 25.7 335 76-431 532-904 (1153)
10 KOG0618 Serine/threonine phosp 99.9 2.1E-26 4.5E-31 236.6 -6.1 341 78-431 47-487 (1081)
11 PLN03210 Resistant to P. syrin 99.9 2.7E-22 5.8E-27 227.9 24.7 289 99-407 609-904 (1153)
12 KOG0618 Serine/threonine phosp 99.9 1.4E-25 3.1E-30 230.4 -6.7 317 102-433 46-465 (1081)
13 PRK15387 E3 ubiquitin-protein 99.9 5.7E-22 1.2E-26 210.0 17.1 265 101-416 201-465 (788)
14 PRK15387 E3 ubiquitin-protein 99.9 3.8E-21 8.3E-26 203.8 17.3 265 125-440 201-465 (788)
15 PRK15370 E3 ubiquitin-protein 99.9 1.2E-20 2.6E-25 201.2 18.2 247 101-385 178-428 (754)
16 KOG4237 Extracellular matrix p 99.8 6.7E-23 1.4E-27 192.4 -4.5 252 77-336 68-358 (498)
17 cd00116 LRR_RI Leucine-rich re 99.8 2E-21 4.4E-26 192.1 -0.6 87 345-431 218-318 (319)
18 PRK15370 E3 ubiquitin-protein 99.8 2.2E-19 4.7E-24 191.7 13.6 247 125-409 178-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.8 4.9E-21 1.1E-25 189.4 -0.8 208 129-337 2-234 (319)
20 KOG4237 Extracellular matrix p 99.7 1.3E-19 2.8E-24 170.5 -1.2 289 107-407 52-357 (498)
21 KOG0617 Ras suppressor protein 99.7 1E-18 2.2E-23 146.3 -4.6 135 199-337 51-186 (264)
22 KOG0617 Ras suppressor protein 99.7 1.4E-18 3.1E-23 145.4 -3.9 162 123-321 31-193 (264)
23 PLN03150 hypothetical protein; 99.6 3E-15 6.5E-20 159.4 13.1 154 31-217 368-528 (623)
24 KOG1187 Serine/threonine prote 99.5 1.9E-15 4.1E-20 149.8 1.8 94 431-526 244-346 (361)
25 KOG1909 Ran GTPase-activating 99.3 3.8E-13 8.3E-18 125.6 -2.1 203 196-409 84-311 (382)
26 KOG0532 Leucine-rich repeat (L 99.2 4.5E-13 9.9E-18 132.3 -3.3 196 99-311 73-271 (722)
27 COG4886 Leucine-rich repeat (L 99.2 1.9E-11 4.2E-16 124.5 8.4 196 129-340 97-293 (394)
28 COG4886 Leucine-rich repeat (L 99.2 2.1E-11 4.5E-16 124.2 8.5 200 105-320 97-297 (394)
29 KOG0532 Leucine-rich repeat (L 99.2 6.2E-13 1.3E-17 131.4 -2.9 172 126-313 76-247 (722)
30 PLN03150 hypothetical protein; 99.2 4.8E-11 1E-15 127.4 8.1 111 150-267 419-530 (623)
31 KOG4658 Apoptotic ATPase [Sign 99.1 4.1E-11 9E-16 130.6 5.5 133 97-239 519-653 (889)
32 KOG1909 Ran GTPase-activating 99.1 4.2E-12 9.1E-17 118.7 -2.6 243 97-360 26-310 (382)
33 KOG3207 Beta-tubulin folding c 99.0 3.3E-11 7.1E-16 115.9 -0.0 209 123-338 119-340 (505)
34 PF14580 LRR_9: Leucine-rich r 99.0 3.6E-10 7.7E-15 99.3 4.4 108 99-217 17-126 (175)
35 KOG4658 Apoptotic ATPase [Sign 99.0 3.2E-10 6.9E-15 123.8 4.8 179 100-289 544-730 (889)
36 KOG3207 Beta-tubulin folding c 99.0 8.2E-11 1.8E-15 113.2 -0.0 185 146-336 118-313 (505)
37 KOG1259 Nischarin, modulator o 99.0 1.7E-10 3.7E-15 105.8 1.3 129 253-387 285-414 (490)
38 PF14580 LRR_9: Leucine-rich r 98.9 9.7E-10 2.1E-14 96.6 5.4 128 120-259 14-147 (175)
39 KOG1259 Nischarin, modulator o 98.9 2.7E-10 5.9E-15 104.4 -0.5 129 300-434 284-413 (490)
40 KOG0531 Protein phosphatase 1, 98.9 4.3E-10 9.2E-15 114.9 0.3 128 100-241 71-199 (414)
41 PF13855 LRR_8: Leucine rich r 98.8 5.3E-09 1.2E-13 75.4 3.4 59 126-184 2-60 (61)
42 PF13855 LRR_8: Leucine rich r 98.7 6E-09 1.3E-13 75.2 2.9 61 101-161 1-61 (61)
43 KOG0531 Protein phosphatase 1, 98.7 1.2E-09 2.5E-14 111.7 -1.2 129 122-264 69-198 (414)
44 KOG0197 Tyrosine kinases [Sign 98.5 1.7E-08 3.7E-13 100.2 0.3 78 433-523 372-452 (468)
45 KOG0192 Tyrosine kinase specif 98.5 4.1E-08 8.8E-13 97.1 1.1 85 432-526 211-297 (362)
46 KOG1026 Nerve growth factor re 98.4 3.5E-08 7.5E-13 103.1 0.1 82 433-525 673-755 (774)
47 smart00750 KIND kinase non-cat 98.4 2.8E-08 6.1E-13 88.9 -0.9 89 432-526 71-163 (176)
48 KOG2982 Uncharacterized conser 98.4 7.4E-08 1.6E-12 88.7 0.1 86 147-239 69-157 (418)
49 KOG2120 SCF ubiquitin ligase, 98.3 1.2E-08 2.6E-13 93.8 -6.1 156 249-406 207-373 (419)
50 PF07714 Pkinase_Tyr: Protein 98.3 1.7E-08 3.7E-13 96.5 -5.5 84 432-526 172-256 (259)
51 KOG2982 Uncharacterized conser 98.3 2.2E-07 4.8E-12 85.6 1.8 178 124-314 70-263 (418)
52 KOG1859 Leucine-rich repeat pr 98.3 3.3E-08 7.1E-13 101.1 -4.1 186 142-337 102-292 (1096)
53 COG5238 RNA1 Ran GTPase-activa 98.3 3.5E-08 7.6E-13 89.6 -3.7 88 323-410 213-317 (388)
54 PHA02988 hypothetical protein; 98.3 8.9E-08 1.9E-12 92.9 -1.3 85 432-526 187-273 (283)
55 KOG2120 SCF ubiquitin ligase, 98.3 1.2E-08 2.6E-13 93.8 -6.8 193 205-399 186-390 (419)
56 KOG1095 Protein tyrosine kinas 98.3 9.3E-08 2E-12 103.6 -1.3 83 432-526 871-955 (1025)
57 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.3 1.7E-07 3.7E-12 90.8 -0.1 92 432-526 177-275 (283)
58 KOG1859 Leucine-rich repeat pr 98.2 3E-08 6.6E-13 101.3 -6.1 127 301-433 165-292 (1096)
59 cd08218 STKc_Nek1 Catalytic do 98.2 2.4E-07 5.1E-12 88.2 -0.6 84 432-526 168-251 (256)
60 COG5238 RNA1 Ran GTPase-activa 98.2 3.3E-07 7.1E-12 83.4 -0.3 190 99-289 28-255 (388)
61 cd05048 PTKc_Ror Catalytic Dom 98.2 2.5E-07 5.3E-12 89.6 -1.4 85 431-526 192-277 (283)
62 cd05038 PTKc_Jak_rpt2 Catalyti 98.2 4.2E-07 9E-12 87.9 0.2 92 432-526 179-277 (284)
63 cd05053 PTKc_FGFR Catalytic do 98.1 3.7E-07 7.9E-12 88.9 -0.6 84 432-526 201-285 (293)
64 cd08529 STKc_FA2-like Catalyti 98.1 5.4E-07 1.2E-11 85.7 0.2 84 432-526 168-251 (256)
65 cd05035 PTKc_Axl_like Catalyti 98.1 4.3E-07 9.3E-12 87.3 -0.7 84 432-526 182-266 (273)
66 cd05114 PTKc_Tec_Rlk Catalytic 98.1 3.9E-07 8.4E-12 86.8 -1.0 83 432-526 168-252 (256)
67 cd05094 PTKc_TrkC Catalytic do 98.1 3.8E-07 8.2E-12 88.8 -1.2 84 432-526 192-276 (291)
68 cd05058 PTKc_Met_Ron Catalytic 98.1 3.9E-07 8.5E-12 87.1 -1.1 84 432-526 169-253 (262)
69 PF08263 LRRNT_2: Leucine rich 98.1 3.4E-06 7.3E-11 55.6 3.7 37 34-73 2-43 (43)
70 KOG4721 Serine/threonine prote 98.1 5.8E-07 1.3E-11 89.7 -0.1 84 432-525 278-361 (904)
71 cd05068 PTKc_Frk_like Catalyti 98.1 3.7E-07 8.1E-12 87.2 -1.4 83 432-525 171-254 (261)
72 cd05052 PTKc_Abl Catalytic dom 98.1 4.2E-07 9.2E-12 87.0 -1.1 85 431-526 171-256 (263)
73 KOG0194 Protein tyrosine kinas 98.1 1.4E-06 3E-11 88.0 2.5 84 431-526 328-414 (474)
74 cd06620 PKc_MAPKK_Byr1_like Ca 98.1 6E-07 1.3E-11 87.0 -0.1 95 432-526 169-264 (284)
75 cd06642 STKc_STK25-YSK1 Cataly 98.1 8.7E-07 1.9E-11 85.5 0.7 84 432-526 168-251 (277)
76 cd06612 STKc_MST1_2 Catalytic 98.1 9.5E-07 2.1E-11 84.0 0.8 86 432-526 166-251 (256)
77 cd05063 PTKc_EphR_A2 Catalytic 98.1 4.8E-07 1E-11 86.8 -1.3 84 432-526 177-261 (268)
78 cd05036 PTKc_ALK_LTK Catalytic 98.1 4.6E-07 1E-11 87.5 -1.5 84 432-526 188-272 (277)
79 cd05085 PTKc_Fer Catalytic dom 98.1 5E-07 1.1E-11 85.7 -1.3 85 431-526 160-245 (250)
80 cd05091 PTKc_Ror2 Catalytic do 98.1 5E-07 1.1E-11 87.5 -1.4 84 432-526 193-277 (283)
81 cd05102 PTKc_VEGFR3 Catalytic 98.1 6.6E-07 1.4E-11 89.1 -0.9 85 432-526 243-328 (338)
82 cd08528 STKc_Nek10 Catalytic d 98.0 9.3E-07 2E-11 84.9 0.0 85 432-526 180-264 (269)
83 cd05054 PTKc_VEGFR Catalytic d 98.0 8.6E-07 1.9E-11 88.3 -0.3 86 431-526 241-327 (337)
84 cd05045 PTKc_RET Catalytic dom 98.0 7.4E-07 1.6E-11 86.7 -1.1 84 432-526 196-280 (290)
85 cd08228 STKc_Nek6 Catalytic do 98.0 1.3E-06 2.8E-11 83.7 0.4 87 432-526 173-259 (267)
86 cd05072 PTKc_Lyn Catalytic dom 98.0 8.9E-07 1.9E-11 84.6 -0.8 84 431-525 170-254 (261)
87 cd06640 STKc_MST4 Catalytic do 98.0 2E-06 4.3E-11 83.0 1.6 84 432-526 168-251 (277)
88 KOG1024 Receptor-like protein 98.0 4.2E-07 9E-12 86.8 -3.0 82 433-526 466-549 (563)
89 cd06651 STKc_MEKK3 Catalytic d 98.0 1.2E-06 2.7E-11 83.9 -0.0 84 432-526 176-259 (266)
90 cd06609 STKc_MST3_like Catalyt 98.0 1.6E-06 3.5E-11 83.4 0.8 85 432-526 165-249 (274)
91 cd05033 PTKc_EphR Catalytic do 98.0 9.8E-07 2.1E-11 84.6 -1.0 84 432-526 175-259 (266)
92 cd08229 STKc_Nek7 Catalytic do 98.0 1.8E-06 4E-11 82.7 0.9 86 432-525 173-258 (267)
93 cd05093 PTKc_TrkB Catalytic do 98.0 9E-07 2E-11 86.0 -1.3 83 432-525 189-272 (288)
94 cd05111 PTK_HER3 Pseudokinase 98.0 1E-06 2.2E-11 85.3 -1.3 84 432-526 178-262 (279)
95 cd06619 PKc_MKK5 Catalytic dom 98.0 1.9E-06 4.2E-11 83.2 0.7 92 432-526 160-251 (279)
96 KOG4579 Leucine-rich repeat (L 98.0 4.7E-07 1E-11 74.0 -3.0 104 103-217 29-136 (177)
97 cd05047 PTKc_Tie Catalytic dom 98.0 9.9E-07 2.1E-11 84.8 -1.4 85 431-526 177-262 (270)
98 cd05113 PTKc_Btk_Bmx Catalytic 97.9 1.1E-06 2.3E-11 83.8 -1.5 84 432-526 168-252 (256)
99 cd08223 STKc_Nek4 Catalytic do 97.9 1.6E-06 3.4E-11 82.5 -0.4 85 431-526 168-252 (257)
100 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.9 9.8E-07 2.1E-11 85.5 -2.0 92 432-526 178-277 (284)
101 cd05092 PTKc_TrkA Catalytic do 97.9 1.3E-06 2.8E-11 84.5 -1.1 83 432-525 191-274 (280)
102 cd06613 STKc_MAP4K3_like Catal 97.9 3E-06 6.5E-11 80.8 1.4 88 432-526 168-258 (262)
103 cd05060 PTKc_Syk_like Catalyti 97.9 1.2E-06 2.6E-11 83.5 -1.5 84 432-526 165-249 (257)
104 cd05089 PTKc_Tie1 Catalytic do 97.9 1.3E-06 2.9E-11 85.2 -1.3 84 432-526 185-269 (297)
105 cd05108 PTKc_EGFR Catalytic do 97.9 1.3E-06 2.7E-11 86.2 -1.5 84 432-526 178-262 (316)
106 cd05040 PTKc_Ack_like Catalyti 97.9 1.8E-06 3.9E-11 82.2 -0.4 83 432-526 167-252 (257)
107 cd08217 STKc_Nek2 Catalytic do 97.9 1.9E-06 4.1E-11 82.3 -0.2 84 432-526 177-260 (265)
108 cd05064 PTKc_EphR_A10 Catalyti 97.9 1.5E-06 3.3E-11 83.3 -0.9 83 432-525 175-258 (266)
109 cd05049 PTKc_Trk Catalytic dom 97.9 1.5E-06 3.2E-11 84.0 -1.1 84 432-526 191-275 (280)
110 KOG4579 Leucine-rich repeat (L 97.9 5.3E-07 1.2E-11 73.7 -3.5 83 301-385 54-136 (177)
111 cd06605 PKc_MAPKK Catalytic do 97.9 2.5E-06 5.4E-11 81.6 0.4 90 432-526 166-255 (265)
112 cd08220 STKc_Nek8 Catalytic do 97.9 1.7E-06 3.7E-11 82.2 -0.8 84 432-526 168-251 (256)
113 cd06624 STKc_ASK Catalytic dom 97.9 2.5E-06 5.5E-11 81.8 0.4 86 432-526 176-263 (268)
114 cd05071 PTKc_Src Catalytic dom 97.9 2.5E-06 5.3E-11 81.6 0.2 84 431-525 169-253 (262)
115 cd05088 PTKc_Tie2 Catalytic do 97.9 1.9E-06 4.2E-11 84.3 -0.5 84 432-526 190-274 (303)
116 cd05148 PTKc_Srm_Brk Catalytic 97.9 1.4E-06 2.9E-11 83.3 -1.6 83 432-525 171-254 (261)
117 cd05070 PTKc_Fyn_Yrk Catalytic 97.9 1.9E-06 4.1E-11 82.3 -0.6 83 432-525 170-253 (260)
118 KOG4278 Protein tyrosine kinas 97.9 1.6E-06 3.5E-11 87.5 -1.2 79 434-525 435-516 (1157)
119 cd05079 PTKc_Jak1_rpt2 Catalyt 97.9 2E-06 4.4E-11 83.3 -0.5 92 432-526 179-277 (284)
120 cd05112 PTKc_Itk Catalytic dom 97.9 1.3E-06 2.9E-11 83.1 -1.8 84 432-526 168-252 (256)
121 cd08224 STKc_Nek6_Nek7 Catalyt 97.9 2.9E-06 6.4E-11 81.1 0.6 87 432-526 173-259 (267)
122 cd05044 PTKc_c-ros Catalytic d 97.9 2.6E-06 5.6E-11 81.7 0.2 83 432-525 180-263 (269)
123 cd05059 PTKc_Tec_like Catalyti 97.9 1.3E-06 2.8E-11 83.2 -1.9 84 432-526 168-252 (256)
124 KOG0199 ACK and related non-re 97.9 3.4E-06 7.3E-11 86.4 1.0 81 432-525 282-365 (1039)
125 cd05065 PTKc_EphR_B Catalytic 97.9 1.8E-06 3.8E-11 82.9 -1.0 84 431-526 177-262 (269)
126 PF12799 LRR_4: Leucine Rich r 97.9 1.4E-05 2.9E-10 52.9 3.4 34 127-161 3-36 (44)
127 cd05075 PTKc_Axl Catalytic dom 97.9 1.6E-06 3.6E-11 83.2 -1.5 83 432-526 181-265 (272)
128 cd05032 PTKc_InsR_like Catalyt 97.9 2.1E-06 4.5E-11 82.8 -0.9 83 432-525 188-271 (277)
129 cd08219 STKc_Nek3 Catalytic do 97.9 3.5E-06 7.6E-11 80.1 0.7 84 432-526 167-250 (255)
130 cd05062 PTKc_IGF-1R Catalytic 97.9 1.5E-06 3.3E-11 83.8 -1.9 84 432-526 188-272 (277)
131 cd05104 PTKc_Kit Catalytic dom 97.9 2.2E-06 4.7E-11 86.7 -0.8 85 432-526 283-368 (375)
132 cd06606 STKc_MAPKKK Catalytic 97.9 3.6E-06 7.9E-11 79.8 0.6 86 432-526 170-255 (260)
133 PTZ00283 serine/threonine prot 97.9 1.8E-06 3.9E-11 90.4 -1.6 84 432-526 212-295 (496)
134 cd05050 PTKc_Musk Catalytic do 97.9 1.9E-06 4.1E-11 83.7 -1.4 84 432-526 199-283 (288)
135 KOG0193 Serine/threonine prote 97.9 4.1E-06 8.9E-11 84.6 0.8 88 431-525 556-646 (678)
136 cd06621 PKc_MAPKK_Pek1_like Ca 97.9 4.4E-06 9.5E-11 81.1 0.9 92 432-526 170-264 (287)
137 cd05043 PTK_Ryk Pseudokinase d 97.9 2.2E-06 4.8E-11 82.8 -1.2 84 432-526 186-270 (280)
138 cd08225 STKc_Nek5 Catalytic do 97.8 2.2E-06 4.7E-11 81.5 -1.4 84 432-526 169-252 (257)
139 cd05051 PTKc_DDR Catalytic dom 97.8 2.4E-06 5.2E-11 83.2 -1.1 88 432-526 199-291 (296)
140 cd05110 PTKc_HER4 Catalytic do 97.8 2E-06 4.3E-11 84.3 -1.8 84 432-526 178-262 (303)
141 cd05106 PTKc_CSF-1R Catalytic 97.8 4.1E-06 9E-11 84.6 0.4 85 432-526 281-366 (374)
142 PF12799 LRR_4: Leucine Rich r 97.8 1.9E-05 4.2E-10 52.2 3.4 37 149-186 1-37 (44)
143 cd05097 PTKc_DDR_like Catalyti 97.8 1.8E-06 4E-11 84.1 -2.3 88 432-526 198-290 (295)
144 cd05098 PTKc_FGFR1 Catalytic d 97.8 2.3E-06 5E-11 83.9 -1.6 84 432-526 209-293 (307)
145 cd05095 PTKc_DDR2 Catalytic do 97.8 2.8E-06 6.1E-11 82.9 -1.1 88 432-526 199-291 (296)
146 cd06616 PKc_MKK4 Catalytic dom 97.8 3.9E-06 8.4E-11 81.5 -0.2 86 432-526 174-265 (288)
147 cd05082 PTKc_Csk Catalytic dom 97.8 2.6E-06 5.7E-11 81.1 -1.4 84 432-526 166-250 (256)
148 cd05101 PTKc_FGFR2 Catalytic d 97.8 2.7E-06 5.8E-11 83.4 -1.5 84 432-526 206-290 (304)
149 cd06610 STKc_OSR1_SPAK Catalyt 97.8 6.4E-06 1.4E-10 78.8 1.2 88 433-526 174-262 (267)
150 cd05055 PTKc_PDGFR Catalytic d 97.8 5.2E-06 1.1E-10 81.3 0.4 86 431-526 209-295 (302)
151 cd06637 STKc_TNIK Catalytic do 97.8 5.9E-06 1.3E-10 79.3 0.8 76 441-526 192-267 (272)
152 cd06646 STKc_MAP4K5 Catalytic 97.8 5.8E-06 1.3E-10 79.2 0.7 88 432-526 173-263 (267)
153 cd05074 PTKc_Tyro3 Catalytic d 97.8 3.3E-06 7.2E-11 81.2 -1.1 81 433-525 183-265 (273)
154 cd05116 PTKc_Syk Catalytic dom 97.8 2.5E-06 5.5E-11 81.3 -1.9 84 432-526 165-249 (257)
155 cd05069 PTKc_Yes Catalytic dom 97.8 4E-06 8.7E-11 80.0 -0.6 83 432-525 170-253 (260)
156 cd05083 PTKc_Chk Catalytic dom 97.8 3.2E-06 6.8E-11 80.4 -1.3 84 432-526 164-248 (254)
157 cd05061 PTKc_InsR Catalytic do 97.8 2.7E-06 5.8E-11 82.6 -1.9 84 432-526 188-272 (288)
158 cd05067 PTKc_Lck_Blk Catalytic 97.8 4.1E-06 8.9E-11 79.9 -0.6 83 432-525 170-253 (260)
159 cd05096 PTKc_DDR1 Catalytic do 97.8 2.2E-06 4.8E-11 84.0 -2.6 91 432-526 207-299 (304)
160 cd06654 STKc_PAK1 Catalytic do 97.8 6.8E-06 1.5E-10 80.2 0.8 86 432-526 183-268 (296)
161 cd05099 PTKc_FGFR4 Catalytic d 97.8 3.8E-06 8.3E-11 82.7 -1.0 85 431-526 202-287 (314)
162 cd07838 STKc_CDK4_6_like Catal 97.8 1.2E-05 2.7E-10 77.7 2.6 95 432-526 173-282 (287)
163 cd06639 STKc_myosinIIIB Cataly 97.8 5.5E-06 1.2E-10 80.6 0.0 74 441-526 209-285 (291)
164 cd05105 PTKc_PDGFR_alpha Catal 97.8 4E-06 8.6E-11 85.3 -1.0 85 432-526 306-391 (400)
165 cd05034 PTKc_Src_like Catalyti 97.8 4E-06 8.6E-11 80.0 -1.0 84 431-525 170-254 (261)
166 cd08221 STKc_Nek9 Catalytic do 97.8 5.2E-06 1.1E-10 79.0 -0.2 84 432-526 168-251 (256)
167 cd05084 PTKc_Fes Catalytic dom 97.8 3.9E-06 8.4E-11 79.7 -1.1 83 432-525 163-246 (252)
168 cd05066 PTKc_EphR_A Catalytic 97.8 3.9E-06 8.3E-11 80.5 -1.1 84 432-526 176-260 (267)
169 cd05115 PTKc_Zap-70 Catalytic 97.8 4E-06 8.6E-11 80.0 -1.1 83 432-525 165-248 (257)
170 cd06623 PKc_MAPKK_plant_like C 97.8 5.3E-06 1.2E-10 79.2 -0.3 88 432-526 167-254 (264)
171 cd07830 STKc_MAK_like Catalyti 97.7 5.9E-06 1.3E-10 79.9 -0.1 93 433-526 166-278 (283)
172 cd05100 PTKc_FGFR3 Catalytic d 97.7 3.9E-06 8.4E-11 83.5 -1.4 84 432-526 203-287 (334)
173 cd06649 PKc_MEK2 Catalytic dom 97.7 6.5E-06 1.4E-10 81.8 0.2 35 432-466 169-203 (331)
174 cd05090 PTKc_Ror1 Catalytic do 97.7 4.7E-06 1E-10 80.7 -0.9 83 432-525 193-276 (283)
175 cd05041 PTKc_Fes_like Catalyti 97.7 4.6E-06 9.9E-11 79.1 -1.0 84 432-526 162-246 (251)
176 cd06618 PKc_MKK7 Catalytic dom 97.7 5.3E-06 1.2E-10 80.9 -0.6 87 432-526 181-271 (296)
177 cd05109 PTKc_HER2 Catalytic do 97.7 4.5E-06 9.8E-11 80.6 -1.1 83 432-525 178-261 (279)
178 cd07833 STKc_CDKL Catalytic do 97.7 9.7E-06 2.1E-10 78.5 1.0 95 432-526 168-283 (288)
179 cd00192 PTKc Catalytic domain 97.7 5.4E-06 1.2E-10 78.9 -0.8 84 432-526 174-258 (262)
180 cd06614 STKc_PAK Catalytic dom 97.7 7.8E-06 1.7E-10 79.2 0.3 86 432-526 183-268 (286)
181 cd08530 STKc_CNK2-like Catalyt 97.7 9.2E-06 2E-10 77.1 0.8 84 432-526 168-251 (256)
182 PRK15386 type III secretion pr 97.7 0.00013 2.9E-09 72.3 8.8 75 225-311 49-123 (426)
183 cd06626 STKc_MEKK4 Catalytic d 97.7 1.1E-05 2.4E-10 77.0 1.1 87 432-526 170-259 (264)
184 cd05122 PKc_STE Catalytic doma 97.7 7.6E-06 1.6E-10 77.3 -0.1 86 432-526 164-249 (253)
185 PTZ00267 NIMA-related protein 97.7 4.7E-06 1E-10 87.1 -1.6 84 432-526 238-321 (478)
186 smart00220 S_TKc Serine/Threon 97.7 7.7E-06 1.7E-10 76.6 -0.1 88 431-526 152-239 (244)
187 cd06615 PKc_MEK Catalytic doma 97.7 9.6E-06 2.1E-10 79.6 0.6 34 432-465 165-198 (308)
188 cd07876 STKc_JNK2 Catalytic do 97.7 1.4E-05 3E-10 80.3 1.7 35 432-466 189-223 (359)
189 cd05057 PTKc_EGFR_like Catalyt 97.7 6.1E-06 1.3E-10 79.7 -1.1 83 432-525 178-261 (279)
190 cd06656 STKc_PAK3 Catalytic do 97.7 1.3E-05 2.8E-10 78.2 1.0 86 432-526 182-267 (297)
191 cd06648 STKc_PAK_II Catalytic 97.7 1E-05 2.2E-10 78.5 0.3 86 432-526 182-267 (285)
192 cd05607 STKc_GRK7 Catalytic do 97.7 1E-05 2.2E-10 78.1 0.3 88 431-525 160-247 (277)
193 KOG0581 Mitogen-activated prot 97.7 1.1E-05 2.5E-10 76.9 0.6 87 432-525 244-332 (364)
194 KOG0200 Fibroblast/platelet-de 97.7 8.3E-06 1.8E-10 87.4 -0.4 83 431-525 487-572 (609)
195 cd05073 PTKc_Hck Catalytic dom 97.7 8.6E-06 1.9E-10 77.7 -0.3 83 432-525 170-253 (260)
196 cd06607 STKc_TAO Catalytic dom 97.7 1.3E-05 2.9E-10 78.6 1.0 77 440-526 189-265 (307)
197 cd06658 STKc_PAK5 Catalytic do 97.7 8.1E-06 1.8E-10 79.5 -0.5 87 431-526 184-270 (292)
198 cd06641 STKc_MST3 Catalytic do 97.7 8.7E-06 1.9E-10 78.5 -0.3 84 432-526 168-251 (277)
199 cd05631 STKc_GRK4 Catalytic do 97.7 6.6E-06 1.4E-10 79.8 -1.2 83 432-522 168-250 (285)
200 cd05039 PTKc_Csk_like Catalyti 97.7 5.6E-06 1.2E-10 78.8 -1.7 84 432-526 166-250 (256)
201 cd08227 PK_STRAD_alpha Pseudok 97.7 1.4E-05 3.1E-10 79.1 1.2 35 432-466 175-211 (327)
202 cd07846 STKc_CDKL2_3 Catalytic 97.7 1.3E-05 2.9E-10 77.5 0.9 95 432-526 167-281 (286)
203 PLN00181 protein SPA1-RELATED; 97.7 7E-06 1.5E-10 91.3 -1.2 82 432-526 182-263 (793)
204 cd05078 PTK_Jak2_Jak3_rpt1 Pse 97.7 6.3E-06 1.4E-10 78.6 -1.4 82 432-526 171-254 (258)
205 cd07862 STKc_CDK6 Catalytic do 97.7 1.1E-05 2.3E-10 78.5 0.1 95 432-526 176-285 (290)
206 cd05632 STKc_GRK5 Catalytic do 97.7 9.5E-06 2.1E-10 78.7 -0.3 86 432-525 168-253 (285)
207 cd07859 STKc_TDY_MAPK_plant Ca 97.7 6.3E-06 1.4E-10 82.0 -1.6 34 432-465 173-208 (338)
208 cd08226 PK_STRAD_beta Pseudoki 97.6 2.2E-05 4.8E-10 77.8 2.3 35 432-466 175-211 (328)
209 cd06655 STKc_PAK2 Catalytic do 97.6 7.7E-06 1.7E-10 79.8 -1.0 85 433-526 183-267 (296)
210 cd06629 STKc_MAPKKK_Bck1_like 97.6 1E-05 2.2E-10 77.8 -0.3 87 433-526 178-267 (272)
211 cd06635 STKc_TAO1 Catalytic do 97.6 1.5E-05 3.2E-10 78.7 0.9 85 432-526 188-275 (317)
212 cd06625 STKc_MEKK3_like Cataly 97.6 9.2E-06 2E-10 77.5 -0.6 86 431-526 173-258 (263)
213 cd05056 PTKc_FAK Catalytic dom 97.6 8.2E-06 1.8E-10 78.3 -1.2 81 433-525 176-258 (270)
214 PRK15386 type III secretion pr 97.6 0.00013 2.8E-09 72.4 7.1 77 97-185 48-124 (426)
215 cd08222 STKc_Nek11 Catalytic d 97.6 1.3E-05 2.8E-10 76.4 0.1 84 432-526 172-255 (260)
216 cd06631 STKc_YSK4 Catalytic do 97.6 1.2E-05 2.5E-10 77.0 -0.3 86 432-526 175-260 (265)
217 cd07874 STKc_JNK3 Catalytic do 97.6 1.6E-05 3.4E-10 79.8 0.6 34 432-465 185-218 (355)
218 cd07831 STKc_MOK Catalytic dom 97.6 1.2E-05 2.6E-10 77.6 -0.2 95 432-526 165-277 (282)
219 PHA02882 putative serine/threo 97.6 6.2E-06 1.4E-10 80.4 -2.3 90 432-525 200-289 (294)
220 cd07866 STKc_BUR1 Catalytic do 97.6 1.3E-05 2.9E-10 78.5 0.0 95 432-526 193-306 (311)
221 KOG0196 Tyrosine kinase, EPH ( 97.6 9.7E-06 2.1E-10 84.2 -1.0 81 434-526 803-885 (996)
222 cd06643 STKc_SLK Catalytic dom 97.6 1.5E-05 3.3E-10 77.0 0.2 77 441-526 184-260 (282)
223 cd06628 STKc_MAPKKK_Byr2_like 97.6 1.3E-05 2.8E-10 76.7 -0.5 84 432-526 179-262 (267)
224 cd06917 STKc_NAK1_like Catalyt 97.6 2E-05 4.3E-10 75.9 0.7 84 433-526 169-253 (277)
225 cd05582 STKc_RSK_N N-terminal 97.6 2.8E-05 6E-10 76.8 1.7 81 432-524 165-245 (318)
226 cd06645 STKc_MAP4K3 Catalytic 97.6 1.9E-05 4E-10 75.7 0.4 88 432-526 173-263 (267)
227 PLN00034 mitogen-activated pro 97.6 1.4E-05 3.1E-10 80.1 -0.4 76 443-526 251-326 (353)
228 cd05077 PTK_Jak1_rpt1 Pseudoki 97.6 1.1E-05 2.3E-10 77.3 -1.3 82 432-526 175-258 (262)
229 cd05610 STKc_MASTL Catalytic d 97.6 1E-05 2.2E-10 88.0 -1.7 86 432-526 547-632 (669)
230 cd06608 STKc_myosinIII_like Ca 97.5 2.2E-05 4.8E-10 75.3 0.5 74 441-526 194-270 (275)
231 cd06650 PKc_MEK1 Catalytic dom 97.5 1.6E-05 3.4E-10 79.0 -0.6 35 432-466 169-203 (333)
232 cd06636 STKc_MAP4K4_6 Catalyti 97.5 3.1E-05 6.6E-10 74.9 1.4 77 440-526 201-277 (282)
233 cd07875 STKc_JNK1 Catalytic do 97.5 2.4E-05 5.2E-10 78.8 0.6 34 432-465 192-225 (364)
234 cd07840 STKc_CDK9_like Catalyt 97.5 1.6E-05 3.4E-10 77.0 -0.7 95 432-526 168-282 (287)
235 cd08215 STKc_Nek Catalytic dom 97.5 1.6E-05 3.4E-10 75.5 -0.7 84 432-526 170-253 (258)
236 cd05618 STKc_aPKC_iota Catalyt 97.5 1.6E-05 3.5E-10 78.8 -0.7 85 432-521 163-249 (329)
237 cd05107 PTKc_PDGFR_beta Cataly 97.5 1.2E-05 2.6E-10 81.9 -1.7 85 432-526 308-393 (401)
238 cd06659 STKc_PAK6 Catalytic do 97.5 1.9E-05 4.1E-10 77.1 -0.3 87 431-526 183-269 (297)
239 cd05103 PTKc_VEGFR2 Catalytic 97.5 2.2E-05 4.8E-10 78.4 0.1 85 432-526 248-333 (343)
240 KOG0198 MEKK and related serin 97.5 5.7E-05 1.2E-09 72.8 2.9 86 431-525 187-273 (313)
241 cd06647 STKc_PAK_I Catalytic d 97.5 3.6E-05 7.7E-10 75.0 1.6 85 433-526 183-267 (293)
242 cd05076 PTK_Tyk2_rpt1 Pseudoki 97.5 1.4E-05 3.1E-10 77.0 -1.4 81 433-526 188-270 (274)
243 cd07860 STKc_CDK2_3 Catalytic 97.5 4.1E-05 8.8E-10 74.1 1.7 34 432-465 167-201 (284)
244 cd06644 STKc_STK10_LOK Catalyt 97.5 2.6E-05 5.6E-10 75.9 0.3 74 441-526 191-267 (292)
245 KOG3665 ZYG-1-like serine/thre 97.5 2.8E-05 6.1E-10 83.4 0.6 135 101-243 122-265 (699)
246 cd06638 STKc_myosinIIIA Cataly 97.5 3.1E-05 6.7E-10 75.0 0.7 77 441-526 205-281 (286)
247 KOG0603 Ribosomal protein S6 k 97.5 3.5E-05 7.6E-10 78.6 1.1 80 432-525 480-560 (612)
248 cd07835 STKc_CDK1_like Catalyt 97.5 1.6E-05 3.5E-10 76.8 -1.3 34 432-465 166-200 (283)
249 cd07863 STKc_CDK4 Catalytic do 97.5 2.6E-05 5.5E-10 75.6 0.1 34 432-465 174-207 (288)
250 KOG0596 Dual specificity; seri 97.5 2.7E-05 5.9E-10 77.9 0.2 79 439-526 546-625 (677)
251 cd05608 STKc_GRK1 Catalytic do 97.5 2.3E-05 5E-10 75.8 -0.4 85 432-524 164-248 (280)
252 cd06622 PKc_MAPKK_PBS2_like Ca 97.5 3.2E-05 7E-10 74.9 0.6 77 442-526 184-260 (286)
253 cd07848 STKc_CDKL5 Catalytic d 97.5 4.7E-05 1E-09 73.8 1.6 35 432-466 168-202 (287)
254 cd05611 STKc_Rim15_like Cataly 97.5 2.4E-05 5.3E-10 74.5 -0.4 85 432-524 160-244 (260)
255 cd06627 STKc_Cdc7_like Catalyt 97.5 2.1E-05 4.6E-10 74.4 -0.8 83 432-526 166-249 (254)
256 cd08216 PK_STRAD Pseudokinase 97.4 7.2E-05 1.6E-09 73.6 2.8 35 432-466 175-211 (314)
257 cd06634 STKc_TAO2 Catalytic do 97.4 3.5E-05 7.6E-10 75.6 0.6 85 432-526 178-265 (308)
258 cd05585 STKc_YPK1_like Catalyt 97.4 2.8E-05 6E-10 76.5 -0.2 79 432-522 160-238 (312)
259 smart00219 TyrKc Tyrosine kina 97.4 2.1E-05 4.6E-10 74.7 -1.0 83 432-525 171-254 (258)
260 KOG2739 Leucine-rich acidic nu 97.4 7.1E-05 1.5E-09 68.4 2.3 63 122-186 40-104 (260)
261 KOG2345 Serine/threonine prote 97.4 5.3E-05 1.1E-09 68.5 1.4 77 441-525 217-293 (302)
262 cd06632 STKc_MEKK1_plant Catal 97.4 3.7E-05 8.1E-10 73.0 0.5 83 433-526 169-253 (258)
263 cd07847 STKc_CDKL1_4 Catalytic 97.4 4.1E-05 8.9E-10 74.0 0.6 34 432-465 167-201 (286)
264 cd07870 STKc_PFTAIRE2 Catalyti 97.4 3E-05 6.4E-10 75.4 -0.4 35 432-466 170-205 (291)
265 cd06633 STKc_TAO3 Catalytic do 97.4 4.6E-05 1E-09 75.0 0.8 85 432-526 184-271 (313)
266 cd05118 STKc_CMGC Catalytic do 97.4 4.5E-05 9.7E-10 73.6 0.7 95 432-526 165-278 (283)
267 cd06657 STKc_PAK4 Catalytic do 97.4 3.2E-05 6.8E-10 75.3 -0.4 86 432-526 183-268 (292)
268 cd05037 PTK_Jak_rpt1 Pseudokin 97.4 4.5E-05 9.8E-10 72.5 0.7 82 432-526 171-255 (259)
269 cd05617 STKc_aPKC_zeta Catalyt 97.4 3.5E-05 7.5E-10 76.4 -0.2 87 432-523 163-249 (327)
270 PF00069 Pkinase: Protein kina 97.4 5.9E-06 1.3E-10 78.7 -5.7 90 432-526 165-255 (260)
271 cd07861 STKc_CDK1_euk Catalyti 97.4 4.5E-05 9.8E-10 73.7 0.4 34 432-465 168-202 (285)
272 cd05589 STKc_PKN Catalytic dom 97.4 3.7E-05 8E-10 76.1 -0.3 81 432-524 168-248 (324)
273 cd07844 STKc_PCTAIRE_like Cata 97.4 3.5E-05 7.5E-10 74.9 -0.5 35 432-466 170-205 (291)
274 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.4 3.3E-05 7.2E-10 74.1 -0.7 78 441-526 185-264 (269)
275 cd07829 STKc_CDK_like Catalyti 97.4 4.8E-05 1.1E-09 73.3 0.4 95 432-526 165-277 (282)
276 cd05574 STKc_phototropin_like 97.4 4E-05 8.6E-10 75.5 -0.2 80 432-521 199-278 (316)
277 cd05604 STKc_SGK3 Catalytic do 97.4 5.5E-05 1.2E-09 74.9 0.8 81 432-524 163-243 (325)
278 KOG3665 ZYG-1-like serine/thre 97.4 6.1E-05 1.3E-09 80.9 1.1 133 99-234 146-281 (699)
279 cd05588 STKc_aPKC Catalytic do 97.3 3.7E-05 7.9E-10 76.3 -0.9 86 432-522 163-250 (329)
280 cd06611 STKc_SLK_like Catalyti 97.3 4.6E-05 1E-09 73.5 -0.2 75 440-526 183-260 (280)
281 cd06630 STKc_MEKK1 Catalytic d 97.3 8.3E-05 1.8E-09 71.1 1.5 88 432-526 175-262 (268)
282 cd05600 STKc_Sid2p_Dbf2p Catal 97.3 4.6E-05 9.9E-10 75.7 -0.4 89 432-526 165-255 (333)
283 cd05592 STKc_nPKC_theta_delta 97.3 3.9E-05 8.5E-10 75.6 -0.8 80 432-523 163-242 (316)
284 cd07850 STKc_JNK Catalytic dom 97.3 8.2E-05 1.8E-09 74.6 1.4 34 432-465 184-217 (353)
285 cd05609 STKc_MAST Catalytic do 97.3 4.6E-05 1E-09 74.6 -0.4 84 432-524 183-266 (305)
286 cd05575 STKc_SGK Catalytic dom 97.3 6.3E-05 1.4E-09 74.4 0.5 80 432-523 163-242 (323)
287 cd05616 STKc_cPKC_beta Catalyt 97.3 5.3E-05 1.1E-09 74.9 -0.1 79 432-522 168-246 (323)
288 cd05579 STKc_MAST_like Catalyt 97.3 4.7E-05 1E-09 72.5 -0.6 83 432-524 168-250 (265)
289 cd05573 STKc_ROCK_NDR_like Cat 97.3 9.5E-05 2.1E-09 73.9 1.5 35 432-466 197-231 (350)
290 cd05570 STKc_PKC Catalytic dom 97.3 4E-05 8.8E-10 75.6 -1.2 79 432-522 163-241 (318)
291 cd06617 PKc_MKK3_6 Catalytic d 97.3 9.4E-05 2E-09 71.4 1.3 74 441-526 183-259 (283)
292 cd05584 STKc_p70S6K Catalytic 97.3 4.5E-05 9.8E-10 75.4 -0.9 77 432-520 167-243 (323)
293 PLN00009 cyclin-dependent kina 97.3 9.6E-05 2.1E-09 71.9 1.4 34 432-465 170-204 (294)
294 cd07852 STKc_MAPK15 Catalytic 97.3 4E-05 8.7E-10 76.3 -1.3 94 432-526 179-293 (337)
295 KOG1644 U2-associated snRNP A' 97.3 0.00046 1E-08 60.7 5.3 57 103-161 44-100 (233)
296 cd07832 STKc_CCRK Catalytic do 97.3 5.5E-05 1.2E-09 73.1 -0.4 32 433-464 168-200 (286)
297 cd07839 STKc_CDK5 Catalytic do 97.3 4.4E-05 9.6E-10 73.8 -1.2 34 432-465 166-200 (284)
298 cd05571 STKc_PKB Catalytic dom 97.2 6.5E-05 1.4E-09 74.3 -0.2 77 432-520 162-238 (323)
299 cd05605 STKc_GRK4_like Catalyt 97.2 5.2E-05 1.1E-09 73.5 -0.9 83 432-522 168-250 (285)
300 PTZ00284 protein kinase; Provi 97.2 7.9E-05 1.7E-09 77.7 0.2 35 432-466 312-346 (467)
301 cd05583 STKc_MSK_N N-terminal 97.2 5.9E-05 1.3E-09 73.1 -0.7 86 432-525 173-260 (288)
302 cd07865 STKc_CDK9 Catalytic do 97.2 0.00015 3.3E-09 70.9 2.2 34 432-465 190-224 (310)
303 cd05572 STKc_cGK_PKG Catalytic 97.2 0.00014 3E-09 69.4 1.8 84 432-523 159-242 (262)
304 cd07867 STKc_CDC2L6 Catalytic 97.2 9.3E-05 2E-09 72.8 0.6 34 432-465 182-216 (317)
305 cd05591 STKc_nPKC_epsilon Cata 97.2 5.8E-05 1.3E-09 74.6 -0.9 78 432-521 163-240 (321)
306 PHA03212 serine/threonine kina 97.2 9.9E-05 2.1E-09 75.0 0.7 32 433-464 251-282 (391)
307 cd05046 PTK_CCK4 Pseudokinase 97.2 5.7E-05 1.2E-09 72.6 -1.0 85 432-526 185-270 (275)
308 cd07842 STKc_CDK8_like Catalyt 97.2 6.9E-05 1.5E-09 73.6 -0.5 35 432-466 182-217 (316)
309 cd05601 STKc_CRIK Catalytic do 97.2 0.00013 2.9E-09 72.3 1.3 27 440-466 184-210 (330)
310 cd07837 STKc_CdkB_plant Cataly 97.2 8.3E-05 1.8E-09 72.3 -0.3 34 432-465 178-212 (295)
311 cd05603 STKc_SGK2 Catalytic do 97.2 0.00011 2.5E-09 72.5 0.6 80 432-523 163-242 (321)
312 cd05619 STKc_nPKC_theta Cataly 97.2 7.6E-05 1.6E-09 73.6 -0.7 78 432-523 163-242 (316)
313 cd05578 STKc_Yank1 Catalytic d 97.2 0.00012 2.6E-09 69.7 0.6 85 431-525 165-252 (258)
314 cd05590 STKc_nPKC_eta Catalyti 97.1 7.6E-05 1.6E-09 73.7 -0.9 79 432-522 163-241 (320)
315 cd06652 STKc_MEKK2 Catalytic d 97.1 0.00013 2.8E-09 69.7 0.7 35 432-466 176-210 (265)
316 cd07849 STKc_ERK1_2_like Catal 97.1 4.9E-05 1.1E-09 75.6 -2.4 94 432-526 176-290 (336)
317 cd07841 STKc_CDK7 Catalytic do 97.1 0.00011 2.4E-09 71.6 0.1 95 432-526 169-280 (298)
318 cd07879 STKc_p38delta_MAPK13 C 97.1 8.4E-05 1.8E-09 74.1 -1.0 35 432-466 181-216 (342)
319 cd05594 STKc_PKB_alpha Catalyt 97.1 0.00012 2.6E-09 72.5 0.0 35 432-466 163-197 (325)
320 cd05587 STKc_cPKC Catalytic do 97.1 9.7E-05 2.1E-09 73.1 -0.6 79 432-522 168-246 (324)
321 cd07853 STKc_NLK Catalytic dom 97.1 0.00012 2.6E-09 74.0 0.0 35 432-466 171-206 (372)
322 cd05612 STKc_PRKX_like Catalyt 97.1 7.6E-05 1.7E-09 72.6 -1.4 78 432-521 165-242 (291)
323 PHA03211 serine/threonine kina 97.1 0.00017 3.6E-09 74.7 1.0 33 432-464 329-361 (461)
324 cd05042 PTKc_Aatyk Catalytic d 97.1 7.2E-05 1.6E-09 71.7 -1.7 25 441-465 185-210 (269)
325 cd05614 STKc_MSK2_N N-terminal 97.1 0.00012 2.6E-09 72.7 -0.2 82 432-523 173-257 (332)
326 PTZ00024 cyclin-dependent prot 97.1 0.00011 2.4E-09 72.9 -0.4 95 432-526 200-311 (335)
327 cd05086 PTKc_Aatyk2 Catalytic 97.1 0.00011 2.4E-09 70.4 -0.5 77 441-526 184-263 (268)
328 cd07864 STKc_CDK12 Catalytic d 97.1 0.00016 3.5E-09 70.6 0.6 95 432-526 184-297 (302)
329 cd05576 STKc_RPK118_like Catal 97.1 0.00015 3.2E-09 68.2 0.2 78 432-525 149-226 (237)
330 cd05593 STKc_PKB_gamma Catalyt 97.1 0.00013 2.8E-09 72.4 -0.2 35 432-466 162-196 (328)
331 cd05615 STKc_cPKC_alpha Cataly 97.1 0.00013 2.7E-09 72.3 -0.3 80 432-523 168-247 (323)
332 cd05595 STKc_PKB_beta Catalyti 97.1 7.5E-05 1.6E-09 73.9 -2.0 77 432-520 162-238 (323)
333 cd05620 STKc_nPKC_delta Cataly 97.0 0.00011 2.3E-09 72.5 -0.9 78 432-523 163-242 (316)
334 PTZ00263 protein kinase A cata 97.0 9.2E-05 2E-09 73.4 -1.4 78 432-521 182-259 (329)
335 cd07869 STKc_PFTAIRE1 Catalyti 97.0 0.00029 6.3E-09 68.9 2.0 35 432-466 170-205 (303)
336 cd07873 STKc_PCTAIRE1 Catalyti 97.0 0.00012 2.7E-09 71.5 -0.7 34 432-465 171-205 (301)
337 cd05586 STKc_Sck1_like Catalyt 97.0 0.00028 6E-09 70.0 1.8 79 432-523 163-244 (330)
338 KOG0582 Ste20-like serine/thre 97.0 0.00028 6.2E-09 69.1 1.8 88 430-525 195-290 (516)
339 PTZ00266 NIMA-related protein 97.0 9.1E-05 2E-09 81.7 -1.8 82 432-526 208-293 (1021)
340 KOG1644 U2-associated snRNP A' 97.0 0.0013 2.7E-08 58.0 5.6 106 125-238 42-150 (233)
341 cd07858 STKc_TEY_MAPK_plant Ca 97.0 0.00012 2.5E-09 73.0 -0.9 94 432-526 175-289 (337)
342 KOG1025 Epidermal growth facto 97.0 0.00019 4.1E-09 75.4 0.4 76 437-525 872-950 (1177)
343 cd07868 STKc_CDK8 Catalytic do 97.0 0.0003 6.4E-09 69.3 1.9 34 432-465 182-216 (317)
344 cd05626 STKc_LATS2 Catalytic d 97.0 0.00031 6.7E-09 71.2 2.0 86 432-525 215-302 (381)
345 cd05630 STKc_GRK6 Catalytic do 97.0 0.0001 2.2E-09 71.4 -1.4 82 432-521 168-249 (285)
346 cd07843 STKc_CDC2L1 Catalytic 97.0 0.00024 5.2E-09 69.1 1.1 34 432-465 173-207 (293)
347 PHA03209 serine/threonine kina 97.0 0.00012 2.5E-09 73.6 -1.1 33 432-464 223-255 (357)
348 cd07834 STKc_MAPK Catalytic do 97.0 0.00016 3.5E-09 71.6 -0.6 34 432-465 173-207 (330)
349 PHA03207 serine/threonine kina 97.0 0.00017 3.7E-09 73.4 -0.4 34 432-465 254-287 (392)
350 cd07856 STKc_Sty1_Hog1 Catalyt 96.9 0.00023 5E-09 70.5 0.5 34 432-465 172-206 (328)
351 cd07851 STKc_p38 Catalytic dom 96.9 0.00031 6.6E-09 70.1 1.4 33 433-465 183-216 (343)
352 cd05602 STKc_SGK1 Catalytic do 96.9 0.00019 4.1E-09 71.1 -0.3 81 432-524 163-243 (325)
353 cd07855 STKc_ERK5 Catalytic do 96.9 0.00018 3.8E-09 71.6 -0.5 94 432-526 178-292 (334)
354 cd05581 STKc_PDK1 Catalytic do 96.9 0.00014 3E-09 70.0 -1.4 82 432-525 189-274 (280)
355 cd07836 STKc_Pho85 Catalytic d 96.9 0.00031 6.7E-09 67.8 1.1 34 432-465 167-201 (284)
356 PRK13184 pknD serine/threonine 96.9 0.00018 4E-09 78.9 -0.6 81 432-522 198-279 (932)
357 PHA03390 pk1 serine/threonine- 96.9 0.00019 4.2E-09 68.8 -0.4 86 432-525 173-259 (267)
358 cd07854 STKc_MAPK4_6 Catalytic 96.8 0.0002 4.4E-09 71.4 -1.0 35 432-466 185-220 (342)
359 cd05633 STKc_GRK3 Catalytic do 96.8 0.00029 6.2E-09 68.0 -0.1 82 432-525 162-252 (279)
360 cd07845 STKc_CDK10 Catalytic d 96.8 0.00033 7.1E-09 68.7 0.3 35 432-466 175-210 (309)
361 cd05628 STKc_NDR1 Catalytic do 96.8 0.00042 9.1E-09 69.7 0.9 35 432-466 203-237 (363)
362 cd07871 STKc_PCTAIRE3 Catalyti 96.8 0.00026 5.7E-09 68.6 -0.7 33 433-465 171-204 (288)
363 cd05123 STKc_AGC Catalytic dom 96.8 0.00022 4.9E-09 67.3 -1.2 79 433-523 161-239 (250)
364 cd05577 STKc_GRK Catalytic dom 96.7 0.00049 1.1E-08 66.2 0.9 85 431-524 160-245 (277)
365 PTZ00426 cAMP-dependent protei 96.7 0.00031 6.6E-09 70.0 -0.8 82 432-525 195-281 (340)
366 cd07872 STKc_PCTAIRE2 Catalyti 96.7 0.00034 7.4E-09 68.6 -0.7 33 433-465 172-205 (309)
367 PF13306 LRR_5: Leucine rich r 96.7 0.0076 1.6E-07 50.4 7.6 86 94-182 5-90 (129)
368 cd07878 STKc_p38beta_MAPK11 Ca 96.7 0.00039 8.4E-09 69.3 -0.5 34 432-465 182-216 (343)
369 KOG0201 Serine/threonine prote 96.6 0.00085 1.9E-08 65.7 1.8 83 432-525 178-260 (467)
370 PTZ00036 glycogen synthase kin 96.6 0.00035 7.5E-09 72.3 -1.0 34 432-465 237-271 (440)
371 KOG1023 Natriuretic peptide re 96.6 0.00045 9.7E-09 70.3 -0.4 81 441-525 134-217 (484)
372 KOG2739 Leucine-rich acidic nu 96.6 0.0012 2.5E-08 60.7 2.2 81 100-184 42-127 (260)
373 cd07857 STKc_MPK1 Catalytic do 96.6 0.0003 6.5E-09 69.8 -1.7 35 432-466 176-211 (332)
374 cd05598 STKc_LATS Catalytic do 96.6 0.00071 1.5E-08 68.4 0.7 35 432-466 211-245 (376)
375 cd05606 STKc_beta_ARK Catalyti 96.6 0.00043 9.4E-09 66.7 -0.9 85 432-525 162-252 (278)
376 PF13306 LRR_5: Leucine rich r 96.5 0.0071 1.5E-07 50.6 6.6 82 272-356 8-89 (129)
377 cd05596 STKc_ROCK Catalytic do 96.4 0.00069 1.5E-08 68.4 -0.5 26 441-466 223-248 (370)
378 KOG0591 NIMA (never in mitosis 96.3 0.0014 3.1E-08 60.6 1.3 79 432-522 195-275 (375)
379 cd05580 STKc_PKA Catalytic dom 96.3 0.00064 1.4E-08 66.0 -1.3 78 432-521 165-242 (290)
380 cd05613 STKc_MSK1_N N-terminal 96.3 0.00077 1.7E-08 65.4 -0.9 82 432-521 173-256 (290)
381 KOG2123 Uncharacterized conser 96.3 9.6E-05 2.1E-09 68.0 -6.7 85 100-188 18-103 (388)
382 cd05597 STKc_DMPK_like Catalyt 96.3 0.0017 3.8E-08 64.3 1.4 85 432-525 170-263 (331)
383 KOG0575 Polo-like serine/threo 96.3 0.0012 2.5E-08 67.4 0.2 37 430-466 183-219 (592)
384 cd05627 STKc_NDR2 Catalytic do 96.2 0.0034 7.3E-08 63.1 3.2 35 432-466 203-237 (360)
385 KOG1947 Leucine rich repeat pr 96.2 0.00066 1.4E-08 71.0 -2.2 17 295-311 357-373 (482)
386 cd07877 STKc_p38alpha_MAPK14 C 96.2 0.00076 1.6E-08 67.4 -1.6 34 432-465 184-218 (345)
387 KOG4341 F-box protein containi 96.1 0.00016 3.5E-09 70.2 -6.3 133 275-407 293-437 (483)
388 cd05623 STKc_MRCK_alpha Cataly 96.1 0.0022 4.8E-08 63.6 1.4 35 432-466 170-209 (332)
389 KOG4279 Serine/threonine prote 96.1 0.0038 8.2E-08 64.8 2.8 74 442-525 755-829 (1226)
390 KOG0983 Mitogen-activated prot 96.0 0.0022 4.7E-08 59.2 0.8 73 441-524 270-345 (391)
391 PLN03225 Serine/threonine-prot 96.0 0.0012 2.7E-08 70.1 -1.2 86 441-526 355-448 (566)
392 PHA03210 serine/threonine kina 96.0 0.0013 2.9E-08 69.1 -1.1 32 433-464 336-367 (501)
393 cd06653 STKc_MEKK3_like_1 Cata 96.0 0.002 4.2E-08 61.5 0.1 35 432-466 176-210 (264)
394 cd07880 STKc_p38gamma_MAPK12 C 95.9 0.0027 5.8E-08 63.3 1.0 34 433-466 183-217 (343)
395 cd05629 STKc_NDR_like_fungal C 95.9 0.0022 4.7E-08 64.9 0.1 35 432-466 215-249 (377)
396 cd05599 STKc_NDR_like Catalyti 95.9 0.0017 3.7E-08 65.3 -0.7 35 432-466 206-240 (364)
397 cd05625 STKc_LATS1 Catalytic d 95.9 0.0028 6E-08 64.3 0.8 35 432-466 215-249 (382)
398 KOG2123 Uncharacterized conser 95.8 0.00033 7.2E-09 64.5 -5.5 101 124-234 18-123 (388)
399 cd05624 STKc_MRCK_beta Catalyt 95.8 0.0031 6.7E-08 62.5 0.7 35 432-466 170-209 (331)
400 cd05621 STKc_ROCK2 Catalytic d 95.7 0.0031 6.7E-08 63.6 0.2 35 432-466 210-248 (370)
401 PF00560 LRR_1: Leucine Rich R 95.7 0.0046 1E-07 33.9 0.8 18 127-145 2-19 (22)
402 KOG0694 Serine/threonine prote 95.6 0.0038 8.2E-08 64.7 0.6 34 432-465 535-568 (694)
403 cd05622 STKc_ROCK1 Catalytic d 95.4 0.0036 7.9E-08 63.1 -0.3 35 432-466 210-248 (371)
404 KOG0584 Serine/threonine prote 95.4 0.0022 4.8E-08 65.7 -1.9 81 434-525 213-293 (632)
405 KOG4645 MAPKKK (MAP kinase kin 95.4 0.0058 1.3E-07 67.8 1.1 21 445-465 1421-1441(1509)
406 PF00560 LRR_1: Leucine Rich R 95.4 0.0059 1.3E-07 33.5 0.5 20 150-170 1-20 (22)
407 KOG4257 Focal adhesion tyrosin 95.3 0.0039 8.5E-08 63.9 -0.4 81 432-525 559-642 (974)
408 KOG0671 LAMMER dual specificit 95.3 0.0086 1.9E-07 57.9 1.7 32 433-464 277-308 (415)
409 KOG4341 F-box protein containi 95.3 0.00077 1.7E-08 65.6 -5.4 205 226-430 214-436 (483)
410 KOG1094 Discoidin domain recep 95.2 0.0031 6.7E-08 64.1 -1.6 88 434-525 708-797 (807)
411 KOG0578 p21-activated serine/t 95.2 0.005 1.1E-07 62.4 -0.3 83 433-525 437-520 (550)
412 KOG1947 Leucine rich repeat pr 95.2 0.0017 3.8E-08 67.8 -3.8 16 344-359 358-373 (482)
413 KOG0589 Serine/threonine prote 95.1 0.0083 1.8E-07 60.0 1.0 85 431-526 172-256 (426)
414 KOG4308 LRR-containing protein 95.0 0.00019 4.1E-09 73.8 -11.0 84 102-185 88-184 (478)
415 cd00180 PKc Catalytic domain o 95.0 0.007 1.5E-07 54.8 0.3 51 433-526 161-212 (215)
416 KOG0583 Serine/threonine prote 94.3 0.01 2.3E-07 59.4 -0.4 84 432-526 188-273 (370)
417 KOG4308 LRR-containing protein 94.0 0.00069 1.5E-08 69.7 -9.7 144 96-242 110-276 (478)
418 KOG0195 Integrin-linked kinase 93.9 0.028 6.1E-07 51.9 1.6 74 443-526 367-440 (448)
419 KOG1006 Mitogen-activated prot 93.9 0.016 3.4E-07 53.5 -0.1 75 442-524 246-323 (361)
420 KOG0667 Dual-specificity tyros 93.8 0.041 8.8E-07 57.0 2.6 30 433-462 356-385 (586)
421 KOG1035 eIF-2alpha kinase GCN2 93.6 0.016 3.4E-07 64.1 -0.8 83 434-526 784-869 (1351)
422 KOG1989 ARK protein kinase fam 93.2 0.038 8.3E-07 59.0 1.3 74 438-525 231-304 (738)
423 KOG0615 Serine/threonine prote 92.5 0.13 2.9E-06 50.5 3.7 21 444-464 360-380 (475)
424 KOG0473 Leucine-rich repeat pr 91.7 0.0035 7.6E-08 56.4 -7.2 89 95-186 36-124 (326)
425 KOG0592 3-phosphoinositide-dep 91.7 0.038 8.2E-07 56.0 -0.9 35 432-466 254-288 (604)
426 PF13504 LRR_7: Leucine rich r 90.2 0.19 4.1E-06 25.5 1.3 10 151-160 3-12 (17)
427 KOG0984 Mitogen-activated prot 89.7 0.12 2.7E-06 46.0 0.5 27 441-467 228-254 (282)
428 KOG0580 Serine/threonine prote 89.6 0.066 1.4E-06 48.8 -1.2 83 432-526 189-271 (281)
429 KOG1027 Serine/threonine prote 89.2 0.46 1E-05 51.0 4.4 35 432-466 681-716 (903)
430 KOG0696 Serine/threonine prote 89.0 0.15 3.2E-06 50.2 0.6 35 432-466 517-551 (683)
431 KOG0574 STE20-like serine/thre 88.8 0.27 5.9E-06 46.2 2.1 82 432-522 196-277 (502)
432 PLN03224 probable serine/threo 88.8 0.2 4.3E-06 52.4 1.4 21 443-463 410-430 (507)
433 KOG0598 Ribosomal protein S6 k 88.7 0.12 2.7E-06 49.9 -0.2 34 432-465 192-225 (357)
434 smart00221 STYKc Protein kinas 86.8 0.16 3.4E-06 46.5 -0.6 35 432-466 166-201 (225)
435 KOG0661 MAPK related serine/th 86.8 0.31 6.8E-06 48.9 1.4 87 438-525 183-288 (538)
436 KOG0610 Putative serine/threon 86.7 0.39 8.4E-06 47.4 1.9 34 432-465 302-335 (459)
437 KOG3864 Uncharacterized conser 86.6 0.13 2.9E-06 45.6 -1.2 79 325-403 102-183 (221)
438 KOG0595 Serine/threonine-prote 86.1 0.18 3.9E-06 49.5 -0.7 35 432-466 181-215 (429)
439 KOG0588 Serine/threonine prote 85.3 0.19 4.1E-06 52.5 -1.0 33 434-466 180-213 (786)
440 KOG0032 Ca2+/calmodulin-depend 85.0 0.42 9.1E-06 48.1 1.3 85 432-526 205-291 (382)
441 KOG0473 Leucine-rich repeat pr 84.8 0.033 7.2E-07 50.4 -5.8 88 295-385 37-124 (326)
442 KOG0593 Predicted protein kina 84.3 0.53 1.2E-05 44.6 1.5 23 441-463 178-200 (396)
443 PF13516 LRR_6: Leucine Rich r 83.9 0.43 9.3E-06 26.5 0.5 14 373-386 3-16 (24)
444 KOG0579 Ste20-like serine/thre 83.9 0.44 9.4E-06 49.6 0.9 73 441-525 211-286 (1187)
445 smart00369 LRR_TYP Leucine-ric 82.9 1.1 2.3E-05 25.4 1.9 13 126-138 3-15 (26)
446 smart00370 LRR Leucine-rich re 82.9 1.1 2.3E-05 25.4 1.9 13 126-138 3-15 (26)
447 KOG1266 Protein kinase [Signal 82.2 0.87 1.9E-05 43.8 2.1 31 433-463 250-280 (458)
448 KOG0605 NDR and related serine 81.5 0.28 6E-06 49.9 -1.6 33 432-464 355-387 (550)
449 KOG0616 cAMP-dependent protein 81.0 0.43 9.3E-06 45.1 -0.4 41 425-465 199-241 (355)
450 KOG0695 Serine/threonine prote 80.2 0.62 1.4E-05 44.5 0.4 39 429-467 415-453 (593)
451 KOG4250 TANK binding protein k 79.7 0.58 1.2E-05 49.4 -0.0 35 432-466 190-225 (732)
452 KOG3864 Uncharacterized conser 79.0 0.46 9.9E-06 42.4 -0.8 84 346-429 99-185 (221)
453 KOG2052 Activin A type IB rece 78.6 0.86 1.9E-05 45.5 0.8 80 442-522 403-493 (513)
454 KOG0608 Warts/lats-like serine 77.2 0.87 1.9E-05 47.6 0.4 36 429-464 835-870 (1034)
455 KOG0597 Serine-threonine prote 75.0 0.78 1.7E-05 47.3 -0.6 33 433-465 168-200 (808)
456 KOG0600 Cdc2-related protein k 74.8 1.2 2.6E-05 45.3 0.6 31 434-464 288-319 (560)
457 KOG1033 eIF-2alpha kinase PEK/ 74.6 0.71 1.5E-05 47.0 -1.0 28 433-460 430-457 (516)
458 KOG0658 Glycogen synthase kina 73.1 1.5 3.2E-05 42.7 0.8 92 434-525 194-303 (364)
459 KOG1151 Tousled-like protein k 71.6 1.6 3.4E-05 43.6 0.6 28 439-466 658-685 (775)
460 KOG0033 Ca2+/calmodulin-depend 70.4 2.2 4.7E-05 39.4 1.2 34 432-465 179-212 (355)
461 KOG4717 Serine/threonine prote 70.1 1.9 4.1E-05 44.0 0.8 23 444-466 198-220 (864)
462 KOG0577 Serine/threonine prote 68.3 3.1 6.8E-05 43.3 1.9 78 438-525 198-275 (948)
463 smart00365 LRR_SD22 Leucine-ri 66.6 5.1 0.00011 22.9 1.8 13 149-161 2-14 (26)
464 KOG4242 Predicted myosin-I-bin 66.1 27 0.00058 35.6 7.7 36 374-409 415-453 (553)
465 KOG0587 Traf2- and Nck-interac 65.8 6.8 0.00015 42.8 3.9 76 441-525 204-279 (953)
466 smart00368 LRR_RI Leucine rich 62.1 6.5 0.00014 22.8 1.7 14 149-162 2-15 (28)
467 KOG0604 MAP kinase-activated p 60.4 7.4 0.00016 37.2 2.6 85 434-526 232-320 (400)
468 KOG0594 Protein kinase PCTAIRE 59.8 3.8 8.2E-05 39.7 0.7 22 441-462 197-218 (323)
469 KOG0986 G protein-coupled rece 58.3 2.9 6.4E-05 42.0 -0.3 34 432-465 353-386 (591)
470 smart00364 LRR_BAC Leucine-ric 54.9 8.5 0.00019 21.9 1.3 13 126-138 3-15 (26)
471 KOG0690 Serine/threonine prote 51.9 5 0.00011 38.6 0.1 33 432-464 335-367 (516)
472 KOG0660 Mitogen-activated prot 51.9 3.9 8.5E-05 39.8 -0.6 23 441-463 204-226 (359)
473 KOG0585 Ca2+/calmodulin-depend 50.9 6.7 0.00014 39.8 0.8 75 442-526 296-370 (576)
474 KOG1345 Serine/threonine kinas 50.5 8.1 0.00018 36.4 1.2 26 441-466 201-226 (378)
475 KOG0614 cGMP-dependent protein 49.7 4.3 9.2E-05 41.5 -0.7 32 434-465 583-619 (732)
476 KOG0590 Checkpoint kinase and 48.5 18 0.0004 38.9 3.7 35 431-465 490-525 (601)
477 KOG2137 Protein kinase [Signal 46.2 24 0.00051 37.8 3.9 36 429-464 173-208 (700)
478 KOG1290 Serine/threonine prote 43.5 5.8 0.00013 40.4 -0.9 30 434-463 420-449 (590)
479 KOG0612 Rho-associated, coiled 38.9 9.4 0.0002 43.1 -0.2 33 432-464 243-280 (1317)
480 KOG1167 Serine/threonine prote 37.8 15 0.00033 36.6 1.0 26 439-464 252-277 (418)
481 KOG3763 mRNA export factor TAP 36.2 25 0.00053 36.6 2.2 91 345-437 215-316 (585)
482 KOG3763 mRNA export factor TAP 35.9 19 0.00041 37.4 1.4 63 123-187 216-284 (585)
483 smart00367 LRR_CC Leucine-rich 34.3 27 0.00057 19.6 1.3 11 149-159 2-12 (26)
484 KOG0670 U4/U6-associated splic 32.2 35 0.00075 35.4 2.5 38 426-463 586-633 (752)
485 KOG0665 Jun-N-terminal kinase 31.8 14 0.0003 35.7 -0.3 30 434-463 186-215 (369)
486 KOG0663 Protein kinase PITSLRE 26.3 18 0.00038 35.3 -0.6 26 438-463 251-276 (419)
487 KOG0668 Casein kinase II, alph 25.4 15 0.00033 33.7 -1.1 21 444-464 212-232 (338)
488 KOG0669 Cyclin T-dependent kin 25.3 83 0.0018 29.5 3.5 26 439-464 203-228 (376)
489 KOG3653 Transforming growth fa 25.1 18 0.00039 36.9 -0.9 81 442-523 401-494 (534)
490 KOG0607 MAP kinase-interacting 23.6 22 0.00048 34.4 -0.5 26 441-466 267-292 (463)
491 KOG0599 Phosphorylase kinase g 23.2 18 0.00039 34.1 -1.1 25 441-465 204-228 (411)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.6e-58 Score=521.80 Aligned_cols=368 Identities=39% Similarity=0.647 Sum_probs=230.6
Q ss_pred chhHHHHHHHHHHhccC----CCCCCCCCCCCCCCCCcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCEEeC
Q 009771 33 ISIHVAASEIERQALLN----SGWWKDRIPQNTSDHCGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDL 108 (526)
Q Consensus 33 ~~~~~~~l~~~~~~~~~----~~~w~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l 108 (526)
.+.|+.|++.||+.+.+ ..+|.. ..|||.|.||+|+..++|+.|++++....+.+ +..+..+++|+.|+|
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~-----~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~-~~~~~~l~~L~~L~L 100 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNS-----SADVCLWQGITCNNSSRVVSIDLSGKNISGKI-SSAIFRLPYIQTINL 100 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCC-----CCCCCcCcceecCCCCcEEEEEecCCCccccC-ChHHhCCCCCCEEEC
Confidence 44788999999999854 556754 57899999999987789999999965433322 567888999999999
Q ss_pred CCCCCCCCCchhcc-CCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc
Q 009771 109 GSNNLSGSIPSQID-SLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSG 187 (526)
Q Consensus 109 ~~n~~~~~~p~~l~-~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 187 (526)
++|++.|.+|..+. .+++|++|+|++|.+++.+|. +.+++|++|+|++|.+++.+|..++++++|++|++++|.+.+
T Consensus 101 s~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 178 (968)
T PLN00113 101 SNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVG 178 (968)
T ss_pred CCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccc
Confidence 99998888887654 777777777777777665554 234555555555555555555555555555555555555554
Q ss_pred cCCcccc-----------------cCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhc
Q 009771 188 VLPIYFG-----------------TIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIEN 250 (526)
Q Consensus 188 ~~p~~~~-----------------~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~ 250 (526)
.+|..+. .+|..++++++|++|++++|++++.+|..++++++|++|++++|.+++.+|..+++
T Consensus 179 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 258 (968)
T PLN00113 179 KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN 258 (968)
T ss_pred cCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhC
Confidence 4443322 23344455556666666666666556665666666666666666665555555666
Q ss_pred CcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEE
Q 009771 251 LKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILD 330 (526)
Q Consensus 251 l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 330 (526)
+++|+.|++++|.+.+.+|..+..+++|++|++++|.+++.+|..+.++++|+.|++++|.+.+.+|..+..+++|+.|+
T Consensus 259 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 338 (968)
T PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQ 338 (968)
T ss_pred CCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEE
Confidence 66666666666655555555555555566666665555555555555555555555555555555555555555555555
Q ss_pred CCCCcCCCCCcccccCCCCCCeecCcCCcCcc------------------------cCcccccCCCCCCEEecCCCcCcc
Q 009771 331 LSSNQLHSSIPLVIGNFSALSYLDLSDNRICG------------------------IIPDELTKLSHLKYLNLSSNLLSG 386 (526)
Q Consensus 331 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------------------~~~~~~~~l~~L~~L~L~~n~l~~ 386 (526)
+++|.+.+.+|..++.+++|+.|++++|++++ .+|..+..+++|+.|++++|++++
T Consensus 339 L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~ 418 (968)
T PLN00113 339 LWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSG 418 (968)
T ss_pred CcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeee
Confidence 55555555555555555555555555555444 444455556667777777777776
Q ss_pred cchHHhhcCcCCCEEEccCCcC
Q 009771 387 QIPFAIGKLFNLASLDLSKNKL 408 (526)
Q Consensus 387 ~~~~~~~~~~~L~~L~l~~n~l 408 (526)
.+|..+..++.|+.|++++|.+
T Consensus 419 ~~p~~~~~l~~L~~L~Ls~N~l 440 (968)
T PLN00113 419 ELPSEFTKLPLVYFLDISNNNL 440 (968)
T ss_pred ECChhHhcCCCCCEEECcCCcc
Confidence 6776666655554444444433
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.5e-41 Score=379.95 Aligned_cols=334 Identities=41% Similarity=0.605 Sum_probs=222.3
Q ss_pred CCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEE
Q 009771 99 CFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 178 (526)
.+++|++|++++|.+++.+|..++++++|++|++++|.+.+.+|..++++++|++|+|++|.+.+.+|..++++++|++|
T Consensus 138 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 217 (968)
T PLN00113 138 SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWI 217 (968)
T ss_pred ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEE
Confidence 34455555555555555555566666666666666666666666666666666666666666666666666666666666
Q ss_pred EccCCcCCccCCcccc-----------------cCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccC
Q 009771 179 SLDGNKLSGVLPIYFG-----------------TIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLG 241 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~-----------------~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~ 241 (526)
++++|.+++.+|..++ .+|..++++++|++|++++|.+.+.+|..+.++++|++|++++|.+.
T Consensus 218 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 297 (968)
T PLN00113 218 YLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297 (968)
T ss_pred ECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeec
Confidence 6666666655554332 22333344444444444444444444444444444445555544444
Q ss_pred CCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCC
Q 009771 242 GVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLG 321 (526)
Q Consensus 242 ~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~ 321 (526)
+.+|..+.++++|+.|++++|.+.+.+|..+..+++|+.|++++|.+++.+|..+..+++|+.|++++|++.+.+|..+.
T Consensus 298 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~ 377 (968)
T PLN00113 298 GEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC 377 (968)
T ss_pred cCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh
Confidence 44444444555555555555555555555555555555555555555555555555555566666666666555555555
Q ss_pred CCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEE
Q 009771 322 RLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASL 401 (526)
Q Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 401 (526)
.+++|+.|++++|.+.+.+|..++.+++|+.|++++|++++.+|..+..++.|+.|++++|.+++.+|..+..+++|++|
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 457 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQML 457 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEE
Confidence 56666666666666667777778888999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 402 DLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 402 ~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
++++|.+.+.+|..+ ..++|+.|++++|+++
T Consensus 458 ~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~ 488 (968)
T PLN00113 458 SLARNKFFGGLPDSF-GSKRLENLDLSRNQFS 488 (968)
T ss_pred ECcCceeeeecCccc-ccccceEEECcCCccC
Confidence 999999999988866 4588999999999875
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.98 E-value=1e-33 Score=276.10 Aligned_cols=332 Identities=27% Similarity=0.309 Sum_probs=237.1
Q ss_pred CCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCC
Q 009771 94 RLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVR 173 (526)
Q Consensus 94 ~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 173 (526)
...|.++++|+.+++..|.++ .||...+...+|+.|+|.+|.++..-.+.+..++.|+.||||.|.++..--..+..-.
T Consensus 95 ~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ 173 (873)
T KOG4194|consen 95 FEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKV 173 (873)
T ss_pred HHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCC
Confidence 344567777777777777776 5666555666677777777777765556677777777777777777633223455556
Q ss_pred CCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcC
Q 009771 174 NLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKS 253 (526)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 253 (526)
++++|+|++|.|+..-...| .++.+|..|.|++|+++...+..|.++++|+.|+|..|++.-.---.|.++++
T Consensus 174 ni~~L~La~N~It~l~~~~F-------~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~S 246 (873)
T KOG4194|consen 174 NIKKLNLASNRITTLETGHF-------DSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPS 246 (873)
T ss_pred CceEEeeccccccccccccc-------cccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchh
Confidence 77777777777776554433 46667777788888877666666777888888888777765433345677777
Q ss_pred CCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCC
Q 009771 254 LTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSS 333 (526)
Q Consensus 254 L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~ 333 (526)
|+.|.|..|.+...-...|..+.++++|+|+.|+++..-..++.+++.|+.|++++|.+...-++.+.-.++|++|+|+.
T Consensus 247 l~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~ 326 (873)
T KOG4194|consen 247 LQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSS 326 (873)
T ss_pred hhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccc
Confidence 77777777777655555666777777777777777765556777777788888888877777677777777788888888
Q ss_pred CcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccch---HHhhcCcCCCEEEccCCcCcc
Q 009771 334 NQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIP---FAIGKLFNLASLDLSKNKLSG 410 (526)
Q Consensus 334 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~~~~L~~L~l~~n~l~~ 410 (526)
|+++...+..+..+..|++|+|++|.+...-...|..+++|+.|||++|.++..+. ..+.++++|+.|++.+|++..
T Consensus 327 N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~ 406 (873)
T KOG4194|consen 327 NRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKS 406 (873)
T ss_pred cccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeee
Confidence 88777777777777777778888877776555566777788888888887765443 356667788888888888876
Q ss_pred cccccccCCCCCCeEEcCCCCCC
Q 009771 411 SIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 411 ~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
.....|.++..|++||+.+|.+.
T Consensus 407 I~krAfsgl~~LE~LdL~~Naia 429 (873)
T KOG4194|consen 407 IPKRAFSGLEALEHLDLGDNAIA 429 (873)
T ss_pred cchhhhccCcccceecCCCCcce
Confidence 65667788888888888888765
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-33 Score=274.42 Aligned_cols=325 Identities=30% Similarity=0.301 Sum_probs=290.5
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
+.-+.|++++|+++..-+..|.++++|+.+++..|.++ .||...+...+|+.|+|.+|.++..-..++..++.|+.|||
T Consensus 78 ~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 78 SQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDL 156 (873)
T ss_pred cceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhh
Confidence 35567999999999888889999999999999999998 78887777788999999999998777778999999999999
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecc
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMD 260 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~ 260 (526)
+.|.++..--..| ..-.++++|+|++|.++..-...|.++.+|..|.|+.|+++...+..|.++++|+.|+|.
T Consensus 157 SrN~is~i~~~sf-------p~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLn 229 (873)
T KOG4194|consen 157 SRNLISEIPKPSF-------PAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLN 229 (873)
T ss_pred hhchhhcccCCCC-------CCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcc
Confidence 9999985433322 344689999999999998878889999999999999999998888889999999999999
Q ss_pred cccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCC
Q 009771 261 ANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSI 340 (526)
Q Consensus 261 ~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 340 (526)
.|++.-.--..|.++++|+.|.+..|.+...-...|..+.++++|+|..|+++..-..++.++++|+.|++|.|.+...-
T Consensus 230 rN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih 309 (873)
T KOG4194|consen 230 RNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIH 309 (873)
T ss_pred ccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheee
Confidence 99987543456888999999999999998766678899999999999999999777788999999999999999999888
Q ss_pred cccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccc---ccc
Q 009771 341 PLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPT---EIG 417 (526)
Q Consensus 341 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~---~~~ 417 (526)
+..+..+++|++|+|++|+++...+..|..+..|++|+|++|.++..-..+|..+++|+.|||++|.++..+.+ .|.
T Consensus 310 ~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~ 389 (873)
T KOG4194|consen 310 IDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFN 389 (873)
T ss_pred cchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhc
Confidence 88889999999999999999988888899999999999999999876667889999999999999999987764 477
Q ss_pred CCCCCCeEEcCCCCCC
Q 009771 418 NCSELRNLTLNHNSLN 433 (526)
Q Consensus 418 ~l~~L~~l~l~~n~l~ 433 (526)
.+++|+.|.+.+|++.
T Consensus 390 gl~~LrkL~l~gNqlk 405 (873)
T KOG4194|consen 390 GLPSLRKLRLTGNQLK 405 (873)
T ss_pred cchhhhheeecCceee
Confidence 8999999999999985
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=1.6e-33 Score=276.59 Aligned_cols=338 Identities=29% Similarity=0.463 Sum_probs=281.2
Q ss_pred CEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCc-cCCcccCCCCCCCEEE
Q 009771 77 RITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTG-TIPKEIGSLRNLEVLD 155 (526)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~-~ip~~l~~l~~L~~L~ 155 (526)
+++-+.|......- -|..++.+.+|++|.+++|++. .+..++..++.||.+.+.+|++.. -||..+..+..|..||
T Consensus 33 ~~~WLkLnrt~L~~--vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lD 109 (1255)
T KOG0444|consen 33 QMTWLKLNRTKLEQ--VPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILD 109 (1255)
T ss_pred heeEEEechhhhhh--ChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeee
Confidence 45666665322211 1567888889999999999886 455678889999999999998853 4788888999999999
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccc
Q 009771 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDL 235 (526)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l 235 (526)
||+|++. ..|..+.+-.++-.|+|++|+|.. ||..+ +.+++.|-.|||++|++. .+|+.+..+..|++|.|
T Consensus 110 LShNqL~-EvP~~LE~AKn~iVLNLS~N~Iet-IPn~l------finLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~L 180 (1255)
T KOG0444|consen 110 LSHNQLR-EVPTNLEYAKNSIVLNLSYNNIET-IPNSL------FINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKL 180 (1255)
T ss_pred cchhhhh-hcchhhhhhcCcEEEEcccCcccc-CCchH------HHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhc
Confidence 9999997 788889999999999999999873 33322 357888999999999987 67777899999999999
Q ss_pred cccccCCCCchhhhcCcCCCeeecccccCC-CCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcC
Q 009771 236 SSNKLGGVLPQEIENLKSLTALSMDANNLG-GPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTG 314 (526)
Q Consensus 236 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~-~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~ 314 (526)
++|.+...--..+..+++|+.|.+++.+-+ ..+|.++..+.+|..++++.|.+. .+|..+.++++|+.|+|++|+++.
T Consensus 181 s~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ite 259 (1255)
T KOG0444|consen 181 SNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITE 259 (1255)
T ss_pred CCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceee
Confidence 999876544444556778888888876543 578999999999999999999987 689999999999999999999984
Q ss_pred CCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcc-cCcccccCCCCCCEEecCCCcCcccchHHhh
Q 009771 315 HIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICG-IIPDELTKLSHLKYLNLSSNLLSGQIPFAIG 393 (526)
Q Consensus 315 ~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 393 (526)
+....+...+|++|++|.|+++ .+|.++..+++|+.|.+.+|+++- -+|..++++..|+.+..++|.+. .+|..+.
T Consensus 260 -L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglc 336 (1255)
T KOG0444|consen 260 -LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLC 336 (1255)
T ss_pred -eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhh
Confidence 3445566779999999999998 789999999999999999998763 37889999999999999999987 8999999
Q ss_pred cCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCC
Q 009771 394 KLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNS 431 (526)
Q Consensus 394 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~ 431 (526)
.|..|+.|.|++|++- .+|..+.-++.|+.||+..|+
T Consensus 337 RC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 337 RCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred hhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 9999999999999987 678999999999999999885
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=6.8e-32 Score=265.13 Aligned_cols=342 Identities=28% Similarity=0.463 Sum_probs=274.8
Q ss_pred CEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEc
Q 009771 77 RITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDL 156 (526)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L 156 (526)
-|+.+++++....+.--|.....+++++.|.|...++. .+|++++.|.+|++|.+++|++. .+-..++.++.|+.+++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 46677777543333222566777888888888887776 67888888888888888888887 44566778888888888
Q ss_pred cCCCCCC-CCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccc
Q 009771 157 GSNNLNG-TIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDL 235 (526)
Q Consensus 157 ~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l 235 (526)
..|++.. -+|..+..+..|..|||++|++. ..|..+...+++-.|+|++|++....-+-|.+++.|-.|+|
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~--------EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDL 157 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLR--------EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDL 157 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhh--------hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhcc
Confidence 8888753 47788888888899999998876 45667778888888999998887433345678888888899
Q ss_pred cccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCC-CCCchhhhCCCCCcEEEeeCccCcC
Q 009771 236 SSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFN-GSIPREIVNLKNLTSLSLGGNKLTG 314 (526)
Q Consensus 236 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~-g~~p~~l~~~~~L~~L~l~~n~l~~ 314 (526)
++|++. .+|+.+..+..|++|.|++|.+.-.-...+..+++|++|.+++.+-+ ..+|.++..+.+|..+|++.|.+.
T Consensus 158 S~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp- 235 (1255)
T KOG0444|consen 158 SNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP- 235 (1255)
T ss_pred ccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-
Confidence 988887 56777888888899999888765433334445677888888775433 357888888999999999999998
Q ss_pred CCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCc-ccchHHhh
Q 009771 315 HIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLS-GQIPFAIG 393 (526)
Q Consensus 315 ~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~ 393 (526)
.+|+.+.++++|+.|+||+|.++ .+....+...+|++|+++.|+++ .+|+.++++++|+.|.+.+|+++ ..+|..+|
T Consensus 236 ~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIG 313 (1255)
T KOG0444|consen 236 IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIG 313 (1255)
T ss_pred cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchh
Confidence 78899999999999999999997 44455677788999999999998 78999999999999999999986 46899999
Q ss_pred cCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 394 KLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 394 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
.+..|+.++.++|.+. .+|..++.|+.|+.|.+++|.+-
T Consensus 314 KL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi 352 (1255)
T KOG0444|consen 314 KLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI 352 (1255)
T ss_pred hhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee
Confidence 9999999999998875 78999999999999999999874
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.95 E-value=8.2e-31 Score=245.52 Aligned_cols=329 Identities=34% Similarity=0.529 Sum_probs=237.8
Q ss_pred CCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCC
Q 009771 94 RLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVR 173 (526)
Q Consensus 94 ~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 173 (526)
+++++.+..++.++.++|+++ .+|++++.+.+|+.|++++|.+. .+|+.++.+..|+.++..+|+++ ..|..++++.
T Consensus 84 p~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~ 160 (565)
T KOG0472|consen 84 PAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLS 160 (565)
T ss_pred CHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHH
Confidence 556677777777777777775 56777777777777777777776 56677777777777777777776 5666777777
Q ss_pred CCCEEEccCCcCCccCCccc---------------ccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCccccccc
Q 009771 174 NLETLSLDGNKLSGVLPIYF---------------GTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSN 238 (526)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~---------------~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n 238 (526)
+|..+++.+|++....|..+ ..+|+.++.+.+|+.|++.+|++. .+| .|..+..|++++++.|
T Consensus 161 ~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N 238 (565)
T KOG0472|consen 161 KLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGEN 238 (565)
T ss_pred HHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhccc
Confidence 77777777777665444322 267777777777777777777776 455 5777777888888777
Q ss_pred ccCCCCchhhh-cCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcC---
Q 009771 239 KLGGVLPQEIE-NLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTG--- 314 (526)
Q Consensus 239 ~l~~~~p~~l~-~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~--- 314 (526)
++. .+|.... +++++..||+.+|++. +.|+.++.+++|+.||+++|.+++ +|.+++++ +|++|.+.+|.+..
T Consensus 239 ~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr 314 (565)
T KOG0472|consen 239 QIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRR 314 (565)
T ss_pred HHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHH
Confidence 776 4455444 7888888999988886 678888888899999999998885 67778887 78888777775410
Q ss_pred ----------------------------------CCCC-CCC---CCCc--------------------------ccEEE
Q 009771 315 ----------------------------------HIPS-TLG---RLTS--------------------------LQILD 330 (526)
Q Consensus 315 ----------------------------------~~p~-~l~---~l~~--------------------------L~~L~ 330 (526)
..|. .+. .+.+ .+..+
T Consensus 315 ~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~Vn 394 (565)
T KOG0472|consen 315 EIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVN 394 (565)
T ss_pred HHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEe
Confidence 0000 000 0011 33444
Q ss_pred CCCCcCC-----------------------CCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCc--
Q 009771 331 LSSNQLH-----------------------SSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLS-- 385 (526)
Q Consensus 331 Ls~n~l~-----------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-- 385 (526)
++.|++. +.+|..+..+++|..|+|++|-+. .+|.+++.+..|+.|+++.|+|.
T Consensus 395 fskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~l 473 (565)
T KOG0472|consen 395 FSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRML 473 (565)
T ss_pred cccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccc
Confidence 4444432 234555666788888999888776 67888888888999998887653
Q ss_pred ---------------------ccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 386 ---------------------GQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 386 ---------------------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
...+..++++.+|+.||+.+|.+. .+|+.+++|.+|++|++++|+|.
T Consensus 474 P~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 474 PECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 122334788999999999999987 78999999999999999999986
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.94 E-value=8.2e-30 Score=238.81 Aligned_cols=304 Identities=32% Similarity=0.483 Sum_probs=232.5
Q ss_pred CCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCC
Q 009771 94 RLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVR 173 (526)
Q Consensus 94 ~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 173 (526)
+..+..+.+|+.+++++|.+. .+|++++.+..|..++..+|+++ ..|+.+.++.+|..+++.+|.+.. .|+..-+++
T Consensus 107 p~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~ 183 (565)
T KOG0472|consen 107 PEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMK 183 (565)
T ss_pred cHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHH
Confidence 556778899999999999997 67889999999999999999998 678889999999999999998863 333333356
Q ss_pred CCCEEEccCCcCCccCCcccc----------------cCcccccCCCCCCEEEccCCcCCCcCchhhc-CcCccCccccc
Q 009771 174 NLETLSLDGNKLSGVLPIYFG----------------TIPIEIESLRNLQWLDLSSNKLSGTIPKEIG-SLRNLKELDLS 236 (526)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~----------------~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~-~l~~L~~L~l~ 236 (526)
.|++||...|.+. .+|..++ .+| +|..+..|++|.++.|++. .+|.... +++++..||+.
T Consensus 184 ~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLR 260 (565)
T KOG0472|consen 184 RLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLR 260 (565)
T ss_pred HHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeecc
Confidence 6666666555443 2333332 455 7889999999999999987 5665554 89999999999
Q ss_pred ccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCC--------------------------
Q 009771 237 SNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNG-------------------------- 290 (526)
Q Consensus 237 ~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g-------------------------- 290 (526)
+|++. ..|+.+..+.+|++||+++|.+++ .|.+++++ .|+.|.+.+|.+..
T Consensus 261 dNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dgl 337 (565)
T KOG0472|consen 261 DNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGL 337 (565)
T ss_pred ccccc-cCchHHHHhhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCC
Confidence 99998 678999999999999999999984 67788887 77777666665320
Q ss_pred --------------------------------------------------------------------------------
Q 009771 291 -------------------------------------------------------------------------------- 290 (526)
Q Consensus 291 -------------------------------------------------------------------------------- 290 (526)
T Consensus 338 S~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l 417 (565)
T KOG0472|consen 338 SQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDL 417 (565)
T ss_pred CCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHH
Confidence
Q ss_pred --------CCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcc
Q 009771 291 --------SIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICG 362 (526)
Q Consensus 291 --------~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 362 (526)
.+|..+..+++|+.|++++|-+. .+|..++.+..|+.|+++.|+|. .+|.++.....++.+-.++|++..
T Consensus 418 ~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~ 495 (565)
T KOG0472|consen 418 VLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGS 495 (565)
T ss_pred HhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccc
Confidence 02233344456666666665554 45666666666666666666665 556666655566666666666665
Q ss_pred cCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCc
Q 009771 363 IIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLS 409 (526)
Q Consensus 363 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 409 (526)
..|..+..+.+|..|||.+|.+. .+|..+|+|.+|++|++++|.|.
T Consensus 496 vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 496 VDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 55556889999999999999998 79999999999999999999997
No 9
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.93 E-value=2.4e-24 Score=244.59 Aligned_cols=335 Identities=24% Similarity=0.327 Sum_probs=250.2
Q ss_pred CCEEEEEcCCC-ceecccCCCCcCCCCCCCEEeCCCCC------CCCCCchhccCCC-CCCEEEccCccCCccCCcccCC
Q 009771 76 GRITDIGLQKS-NIKGELGRLNFSCFPNLQYLDLGSNN------LSGSIPSQIDSLS-NLTYIYLYENNLTGTIPKEIGS 147 (526)
Q Consensus 76 ~~v~~l~l~~~-~~~~~~~~~~~~~l~~L~~L~l~~n~------~~~~~p~~l~~l~-~L~~L~Ls~n~~~~~ip~~l~~ 147 (526)
.+|..+.+... .....+....|.++++|+.|.+..+. +...+|..+..++ +|+.|.+.++.+. .+|..| .
T Consensus 532 ~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~ 609 (1153)
T PLN03210 532 KKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-R 609 (1153)
T ss_pred ceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-C
Confidence 45666655411 11233446678899999999986653 2334677776664 5999999888776 677776 5
Q ss_pred CCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCc
Q 009771 148 LRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSL 227 (526)
Q Consensus 148 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l 227 (526)
..+|++|++++|.+. .+|..+..+++|++|+++++...+.+| .++.+++|+.|++++|.....+|..++++
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip--------~ls~l~~Le~L~L~~c~~L~~lp~si~~L 680 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP--------DLSMATNLETLKLSDCSSLVELPSSIQYL 680 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC--------ccccCCcccEEEecCCCCccccchhhhcc
Confidence 688999999998876 677788888999999998876555544 24678888999998887777888888888
Q ss_pred CccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhh-----------
Q 009771 228 RNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREI----------- 296 (526)
Q Consensus 228 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l----------- 296 (526)
++|+.|++++|...+.+|..+ ++++|+.|++++|...+.+|.. ..+|+.|++++|.+. .+|..+
T Consensus 681 ~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~ 755 (1153)
T PLN03210 681 NKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILC 755 (1153)
T ss_pred CCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-ccccccccccccccccc
Confidence 889999998876666677655 6788888888887665555543 346777777777654 334321
Q ss_pred -------------------hCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcC
Q 009771 297 -------------------VNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSD 357 (526)
Q Consensus 297 -------------------~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 357 (526)
..+++|+.|++++|...+.+|..++++++|+.|++++|...+.+|..+ .+++|+.|++++
T Consensus 756 ~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~ 834 (1153)
T PLN03210 756 EMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSG 834 (1153)
T ss_pred ccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCC
Confidence 123577888888887777888888889999999998887666777665 688889999998
Q ss_pred CcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCC
Q 009771 358 NRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNS 431 (526)
Q Consensus 358 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~ 431 (526)
|.....+|.. ..+|+.|+|++|.++ .+|.+++.+++|++|++++|.-...+|..+..+++|+.+++++|.
T Consensus 835 c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 835 CSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 8655555542 357889999999987 689999999999999999865555678778888888888888774
No 10
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.90 E-value=2.1e-26 Score=236.56 Aligned_cols=341 Identities=31% Similarity=0.439 Sum_probs=232.9
Q ss_pred EEEEEcCCCc-eecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEc
Q 009771 78 ITDIGLQKSN-IKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDL 156 (526)
Q Consensus 78 v~~l~l~~~~-~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L 156 (526)
...|++++.. +.. +..+..+.+|+.|+++.|.+. ..|.+..++.+|++|+|.+|.+. ..|.++..+++|++||+
T Consensus 47 L~~l~lsnn~~~~f---p~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~Ldl 121 (1081)
T KOG0618|consen 47 LKSLDLSNNQISSF---PIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDL 121 (1081)
T ss_pred eEEeeccccccccC---CchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhccccccc
Confidence 4555665332 222 445566667777777766665 44566666777777777666655 56666666777777777
Q ss_pred cCCCCCCCCccccCCCCC----------------------------------------CC-EEEccCCcCCccCCcccc-
Q 009771 157 GSNNLNGTIPIEIGSVRN----------------------------------------LE-TLSLDGNKLSGVLPIYFG- 194 (526)
Q Consensus 157 ~~n~l~~~~p~~l~~l~~----------------------------------------L~-~L~L~~n~l~~~~p~~~~- 194 (526)
++|.|. .+|..+..++. ++ .|+|++|.+....-..+.
T Consensus 122 S~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~dls~~~~ 200 (1081)
T KOG0618|consen 122 SFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVLDLSNLAN 200 (1081)
T ss_pred chhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhheeeecccchhhhhhhhhccc
Confidence 766653 33332222221 22 255555544411000000
Q ss_pred -----------------------------cCc--ccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCC
Q 009771 195 -----------------------------TIP--IEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGV 243 (526)
Q Consensus 195 -----------------------------~ip--~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 243 (526)
.+. ..-..-.+|+++++++|+++ .+|++++.+.+|+.++..+|+++ .
T Consensus 201 l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~ 278 (1081)
T KOG0618|consen 201 LEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-A 278 (1081)
T ss_pred hhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-h
Confidence 000 00012247888888998888 46688999999999999999995 6
Q ss_pred CchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhh--------------------------
Q 009771 244 LPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIV-------------------------- 297 (526)
Q Consensus 244 ~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~-------------------------- 297 (526)
+|..+...++|+.|....|.+. -+|..+..++.|++|+|..|.+.. +|..+-
T Consensus 279 lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~-lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~ 356 (1081)
T KOG0618|consen 279 LPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPS-LPDNFLAVLNASLNTLNVSSNKLSTLPSYEEN 356 (1081)
T ss_pred hHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccc-cchHHHhhhhHHHHHHhhhhccccccccccch
Confidence 7778888888888888888875 567777788888899888888753 332111
Q ss_pred CCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEE
Q 009771 298 NLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYL 377 (526)
Q Consensus 298 ~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 377 (526)
.++.|+.|.+.+|.+++..-+.+.+..+|+.|+|++|++.......+.++..|+.|+|++|+++ .+|..+..++.|++|
T Consensus 357 ~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL 435 (1081)
T KOG0618|consen 357 NHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTL 435 (1081)
T ss_pred hhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHH
Confidence 1234677888888888777677788888999999999887555556778888888999999887 677888888888888
Q ss_pred ecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCC
Q 009771 378 NLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNS 431 (526)
Q Consensus 378 ~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~ 431 (526)
...+|++. ..| .+.+++.|+.+|++.|.++...-..-..-++|++||+++|.
T Consensus 436 ~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 436 RAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 88888887 566 78888899999999998876433332233789999999986
No 11
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=2.7e-22 Score=227.94 Aligned_cols=289 Identities=25% Similarity=0.295 Sum_probs=202.6
Q ss_pred CCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEE
Q 009771 99 CFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 178 (526)
.+.+|+.|+++++.+. .++..+..+++|++|+|+++...+.+|. ++.+++|++|+|++|.....+|..++++++|+.|
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L 686 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDL 686 (1153)
T ss_pred CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEE
Confidence 3456777777776665 4555666677777777776654445553 6667777777777766556677777777777777
Q ss_pred EccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeee
Q 009771 179 SLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALS 258 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 258 (526)
++++|...+.+|. .+ ++++|+.|++++|...+.+|.. ..+|+.|++++|.+. .+|..+ .+++|+.|.
T Consensus 687 ~L~~c~~L~~Lp~-------~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~ 753 (1153)
T PLN03210 687 DMSRCENLEILPT-------GI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELI 753 (1153)
T ss_pred eCCCCCCcCccCC-------cC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-ccccccccc
Confidence 7777654444332 22 5667777777776555455532 345667777777665 345443 456666666
Q ss_pred cccccCC-------CCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEEC
Q 009771 259 MDANNLG-------GPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDL 331 (526)
Q Consensus 259 l~~n~l~-------~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L 331 (526)
+.++... ...+......++|+.|++++|...+.+|..+.++++|+.|++++|...+.+|..+ .+++|+.|++
T Consensus 754 l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~L 832 (1153)
T PLN03210 754 LCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDL 832 (1153)
T ss_pred ccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEEC
Confidence 6553211 1111112234689999999998888899999999999999999987666788766 7899999999
Q ss_pred CCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCc
Q 009771 332 SSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNK 407 (526)
Q Consensus 332 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 407 (526)
++|.....+|.. ..+|++|++++|.++ .+|..+..+++|+.|++++|.-...+|..+..+++|+.+++++|.
T Consensus 833 s~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 833 SGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 998766666643 367899999999987 578889999999999999965555688888888999999988874
No 12
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.89 E-value=1.4e-25 Score=230.41 Aligned_cols=317 Identities=33% Similarity=0.447 Sum_probs=203.2
Q ss_pred CCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEcc
Q 009771 102 NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLD 181 (526)
Q Consensus 102 ~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 181 (526)
+|+.|++++|.+. ..|..+..+.+|+.|+++.|.+. ..|.+.+++.+|++|.|.+|.+. ..|.++..+.+|++|+++
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 4999999999886 67888999999999999999987 67888999999999999999886 889999999999999999
Q ss_pred CCcCCccCCcccc------------------------------------cCcccccCCCCCCEEEccCCcCCCcCchhhc
Q 009771 182 GNKLSGVLPIYFG------------------------------------TIPIEIESLRNLQWLDLSSNKLSGTIPKEIG 225 (526)
Q Consensus 182 ~n~l~~~~p~~~~------------------------------------~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~ 225 (526)
.|.|.. +|..+. .++.++..++. .|++.+|.+... .+.
T Consensus 123 ~N~f~~-~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~---dls 196 (1081)
T KOG0618|consen 123 FNHFGP-IPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL---DLS 196 (1081)
T ss_pred hhccCC-CchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhh---hhh
Confidence 998863 232221 12222222222 255555544311 112
Q ss_pred CcCccCccccccc--------------------ccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeeccc
Q 009771 226 SLRNLKELDLSSN--------------------KLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGF 285 (526)
Q Consensus 226 ~l~~L~~L~l~~n--------------------~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~ 285 (526)
++.+|+.+....| .++...+ -.-..+|++++++.|++++ +|++++.+.+|+.++..+
T Consensus 197 ~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~ 273 (1081)
T KOG0618|consen 197 NLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANH 273 (1081)
T ss_pred hccchhhhhhhhcccceEEecCcchheeeeccCcceeecc--ccccccceeeecchhhhhc-chHHHHhcccceEecccc
Confidence 2222222222222 2221000 0112356666666666653 456666667777776666
Q ss_pred ccCCC----------------------CCchhhhCCCCCcEEEeeCccCcCCCCCCCC----------------------
Q 009771 286 NRFNG----------------------SIPREIVNLKNLTSLSLGGNKLTGHIPSTLG---------------------- 321 (526)
Q Consensus 286 n~l~g----------------------~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~---------------------- 321 (526)
|.++. .+|.....++.|++|+|..|++....+..+.
T Consensus 274 N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~ 353 (1081)
T KOG0618|consen 274 NRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSY 353 (1081)
T ss_pred hhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccc
Confidence 66641 2334444455566666666555421111100
Q ss_pred ---CCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCC
Q 009771 322 ---RLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNL 398 (526)
Q Consensus 322 ---~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L 398 (526)
..+.|+.|.+.+|.++......+.++++|+.|+|++|++.......+.++..|++|+||+|+++ .+|..+..+..|
T Consensus 354 ~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L 432 (1081)
T KOG0618|consen 354 EENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRL 432 (1081)
T ss_pred cchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhh
Confidence 1234455555555555555455566677777777777776444445666777777777777777 667777777777
Q ss_pred CEEEccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 399 ASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 399 ~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
++|...+|.+. .+| .+..++.|+.+|++.|+++
T Consensus 433 ~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 433 HTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLS 465 (1081)
T ss_pred HHHhhcCCcee-ech-hhhhcCcceEEecccchhh
Confidence 77777777766 456 7889999999999999986
No 13
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=5.7e-22 Score=210.02 Aligned_cols=265 Identities=28% Similarity=0.388 Sum_probs=199.1
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
..-..|++++++++ .+|..+. ++|+.|++++|+++ .+|.. +++|++|++++|+++ .+|.. .++|+.|++
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeec
Confidence 45678999999988 6787775 48999999999988 46653 578999999999988 45643 468899999
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecc
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMD 260 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~ 260 (526)
++|.++. +|. ..++|+.|++++|+++ .+|. ..++|+.|++++|++++ +|.. ..+|+.|+++
T Consensus 270 s~N~L~~-Lp~----------lp~~L~~L~Ls~N~Lt-~LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls 330 (788)
T PRK15387 270 FSNPLTH-LPA----------LPSGLCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAY 330 (788)
T ss_pred cCCchhh-hhh----------chhhcCEEECcCCccc-cccc---cccccceeECCCCcccc-CCCC---cccccccccc
Confidence 9998773 221 2246888999999887 4554 24679999999998885 3432 2467888888
Q ss_pred cccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCC
Q 009771 261 ANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSI 340 (526)
Q Consensus 261 ~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 340 (526)
+|.+++ +|.. ..+|+.|++++|++++ +|.. ..+|+.|++++|++.+ +|.. ..+|+.|++++|.+++ +
T Consensus 331 ~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-L 397 (788)
T PRK15387 331 NNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-L 397 (788)
T ss_pred cCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-C
Confidence 888864 5532 2578899999998885 5542 3578888899988884 5653 3578889999998884 5
Q ss_pred cccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccc
Q 009771 341 PLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEI 416 (526)
Q Consensus 341 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 416 (526)
|.. .++|+.|++++|++++ +|.. ..+|+.|++++|+++ .+|..++.+++|+.|++++|.+++..+..+
T Consensus 398 P~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 398 PVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 543 3578889999998874 5643 346788899999987 688888888899999999999988777665
No 14
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=3.8e-21 Score=203.80 Aligned_cols=265 Identities=28% Similarity=0.377 Sum_probs=210.1
Q ss_pred CCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCC
Q 009771 125 SNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLR 204 (526)
Q Consensus 125 ~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~ 204 (526)
..-..|++++|.++ .+|+.+. ++|+.|++++|+++ .+|.. .++|++|++++|+++.. |. ..+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~LtsL-P~----------lp~ 262 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTSL-PV----------LPP 262 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCcc-cC----------ccc
Confidence 45778999999998 6888775 48999999999998 46643 58999999999999843 42 235
Q ss_pred CCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecc
Q 009771 205 NLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLG 284 (526)
Q Consensus 205 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~ 284 (526)
+|+.|++++|.++ .+|.. ..+|+.|++++|+++. +|. ..++|+.|++++|++++ +|.. ..+|+.|+++
T Consensus 263 sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls 330 (788)
T PRK15387 263 GLLELSIFSNPLT-HLPAL---PSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAY 330 (788)
T ss_pred ccceeeccCCchh-hhhhc---hhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccc
Confidence 8999999999987 45542 2568899999999984 454 34789999999999985 4542 2468889999
Q ss_pred cccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccC
Q 009771 285 FNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGII 364 (526)
Q Consensus 285 ~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 364 (526)
+|.+++ +|.. ..+|+.|++++|++++ +|.. ..+|+.|++++|.+++ +|.. ..+|+.|++++|++++ +
T Consensus 331 ~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-L 397 (788)
T PRK15387 331 NNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-L 397 (788)
T ss_pred cCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-C
Confidence 999975 6642 2589999999999985 5543 3578889999999984 6653 3579999999999985 5
Q ss_pred cccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCCchhcccc
Q 009771 365 PDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGKLAHTM 440 (526)
Q Consensus 365 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~ 440 (526)
|.. .++|+.|++++|++++ +|... .+|+.|++++|.++ .+|..+.+++.|+.+++++|++++......
T Consensus 398 P~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 398 PVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 543 3689999999999984 66543 46889999999998 689999999999999999999986654433
No 15
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=1.2e-20 Score=201.22 Aligned_cols=247 Identities=28% Similarity=0.455 Sum_probs=138.5
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
.+...|++++++++ .+|..+. ++|+.|+|++|.++ .+|..+. ++|++|++++|.++ .+|..+. .+|+.|++
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 34666777776666 3454443 46777777777766 4555443 46777777777765 4554432 35777777
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecc
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMD 260 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~ 260 (526)
++|.+. .+|.. +. ++|+.|++++|+++ .+|..+. ++|+.|++++|++++ +|..+. ++|+.|+++
T Consensus 249 s~N~L~-~LP~~-------l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls 312 (754)
T PRK15370 249 SINRIT-ELPER-------LP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQ 312 (754)
T ss_pred cCCccC-cCChh-------Hh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhc
Confidence 777665 23322 21 35677777777666 3555443 356777777776663 343322 356666666
Q ss_pred cccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCC
Q 009771 261 ANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSI 340 (526)
Q Consensus 261 ~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 340 (526)
+|.++. +|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|.++ .+
T Consensus 313 ~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~L 382 (754)
T PRK15370 313 SNSLTA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NL 382 (754)
T ss_pred CCcccc-CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CC
Confidence 666653 34332 2456666666666654 454442 56666666666665 3444332 45666666666665 33
Q ss_pred cccccCCCCCCeecCcCCcCcccCcccc----cCCCCCCEEecCCCcCc
Q 009771 341 PLVIGNFSALSYLDLSDNRICGIIPDEL----TKLSHLKYLNLSSNLLS 385 (526)
Q Consensus 341 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~l~~L~~L~L~~n~l~ 385 (526)
|..+. ..|+.|++++|++. .+|..+ ...+.+..+++.+|.++
T Consensus 383 P~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 383 PENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 43332 24666666666665 333322 22355556666666654
No 16
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.83 E-value=6.7e-23 Score=192.39 Aligned_cols=252 Identities=25% Similarity=0.310 Sum_probs=163.1
Q ss_pred CEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccC-ccCCccCCcccCCCCCCCEEE
Q 009771 77 RITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYE-NNLTGTIPKEIGSLRNLEVLD 155 (526)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~-n~~~~~ip~~l~~l~~L~~L~ 155 (526)
..+.|.|...... .+++.+|+.+++||+||||+|+|+..-|.+|..+.+|..|-+.+ |+|+...-..|+++..|+.|.
T Consensus 68 ~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 3556666544333 24466777888888888888888777777888887777776666 667644344577777777777
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCC------------CcCchh
Q 009771 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLS------------GTIPKE 223 (526)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~------------~~~p~~ 223 (526)
+.-|++.-.....|..+++|..|.+.+|.+...--. .+..+.+++.+.+..|.+- ...|..
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~-------tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ie 219 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKG-------TFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIE 219 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccc-------cccchhccchHhhhcCccccccccchhhhHHhhchhh
Confidence 777777766666677777777777777766532111 2345556666666555421 111112
Q ss_pred hcCcCccCccccc-------------------------ccccCCCCc-hhhhcCcCCCeeecccccCCCCCCccccCCCc
Q 009771 224 IGSLRNLKELDLS-------------------------SNKLGGVLP-QEIENLKSLTALSMDANNLGGPIPSTLFRLTN 277 (526)
Q Consensus 224 l~~l~~L~~L~l~-------------------------~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~ 277 (526)
++......-..+. .+...+..| ..|..+++|++|++++|.+++.-+.+|.....
T Consensus 220 tsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~ 299 (498)
T KOG4237|consen 220 TSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAE 299 (498)
T ss_pred cccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhh
Confidence 2222111111111 111222222 24677788888888888888777778888888
Q ss_pred cceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcC
Q 009771 278 IEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQL 336 (526)
Q Consensus 278 L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 336 (526)
++.|+|..|++...-...|.++..|+.|+|.+|+++...|..|..+.+|.+|++-.|.+
T Consensus 300 l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 300 LQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred hhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 88888888887655555677788888888888888877777788888888888877765
No 17
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.81 E-value=2e-21 Score=192.11 Aligned_cols=87 Identities=24% Similarity=0.302 Sum_probs=43.0
Q ss_pred cCCCCCCeecCcCCcCcccCccccc-----CCCCCCEEecCCCcCcc----cchHHhhcCcCCCEEEccCCcCccc----
Q 009771 345 GNFSALSYLDLSDNRICGIIPDELT-----KLSHLKYLNLSSNLLSG----QIPFAIGKLFNLASLDLSKNKLSGS---- 411 (526)
Q Consensus 345 ~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~----~~~~~~~~~~~L~~L~l~~n~l~~~---- 411 (526)
..+++|++|++++|.+++.....+. ..+.|++|++++|.+++ .+...+..+++|+++++++|.++..
T Consensus 218 ~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~ 297 (319)
T cd00116 218 ASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQL 297 (319)
T ss_pred cccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHH
Confidence 3444555555555554432111111 12456666666666552 2233444555666666666666643
Q ss_pred ccccccCC-CCCCeEEcCCCC
Q 009771 412 IPTEIGNC-SELRNLTLNHNS 431 (526)
Q Consensus 412 ~~~~~~~l-~~L~~l~l~~n~ 431 (526)
+...+... ..++.+++.+|+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 298 LAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHHhhcCCchhhcccCCCC
Confidence 22223233 456666666654
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=2.2e-19 Score=191.70 Aligned_cols=247 Identities=30% Similarity=0.467 Sum_probs=145.3
Q ss_pred CCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCC
Q 009771 125 SNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLR 204 (526)
Q Consensus 125 ~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~ 204 (526)
.+...|+++++.++ .+|..+. ++|+.|+|++|.++ .+|..+. ++|++|++++|+++. +|.. + ..
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lts-LP~~-------l--~~ 241 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTS-IPAT-------L--PD 241 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCcccc-CChh-------h--hc
Confidence 45678888888877 4666553 57888888888887 5665543 478888888887763 3322 1 13
Q ss_pred CCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecc
Q 009771 205 NLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLG 284 (526)
Q Consensus 205 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~ 284 (526)
+|+.|++++|++. .+|..+. .+|+.|++++|+++ .+|..+. ++|+.|++++|++++ +|..+. ++|+.|+++
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls 312 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQ 312 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhc
Confidence 6778888888776 5665553 46777777777776 3555442 467777777777663 343332 356666677
Q ss_pred cccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccC
Q 009771 285 FNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGII 364 (526)
Q Consensus 285 ~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 364 (526)
+|.++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+|..+. ++|++|++++|+++ .+
T Consensus 313 ~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~L 382 (754)
T PRK15370 313 SNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NL 382 (754)
T ss_pred CCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CC
Confidence 766663 443332 466666666666653 444332 45666666666665 2443332 45666666666655 23
Q ss_pred cccccCCCCCCEEecCCCcCcccchH----HhhcCcCCCEEEccCCcCc
Q 009771 365 PDELTKLSHLKYLNLSSNLLSGQIPF----AIGKLFNLASLDLSKNKLS 409 (526)
Q Consensus 365 ~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~~~~L~~L~l~~n~l~ 409 (526)
|..+. ..|+.|++++|+++ .+|. ..+.++.+..+++.+|.++
T Consensus 383 P~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 383 PENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 43332 24555556666554 2332 2233345555555555554
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.80 E-value=4.9e-21 Score=189.38 Aligned_cols=208 Identities=28% Similarity=0.343 Sum_probs=106.6
Q ss_pred EEEccCccCC-ccCCcccCCCCCCCEEEccCCCCCCC----CccccCCCCCCCEEEccCCcCCccCCcccccCcccccCC
Q 009771 129 YIYLYENNLT-GTIPKEIGSLRNLEVLDLGSNNLNGT----IPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESL 203 (526)
Q Consensus 129 ~L~Ls~n~~~-~~ip~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l 203 (526)
.|+|..+.++ ...+..+..+++|++|+++++.++.. ++..+...++|++++++++.+.+ .+..+..++..+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGLQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHHHHHHHHHHhc
Confidence 4667777776 33445556667788888888877532 44455666777777777776653 233333444455566
Q ss_pred CCCCEEEccCCcCCCcCchhhcCcCc---cCcccccccccCCC----CchhhhcC-cCCCeeecccccCCCC----CCcc
Q 009771 204 RNLQWLDLSSNKLSGTIPKEIGSLRN---LKELDLSSNKLGGV----LPQEIENL-KSLTALSMDANNLGGP----IPST 271 (526)
Q Consensus 204 ~~L~~L~l~~n~l~~~~p~~l~~l~~---L~~L~l~~n~l~~~----~p~~l~~l-~~L~~L~l~~n~l~~~----~p~~ 271 (526)
++|+.|++++|.+.+..+..+..+.+ |++|++++|++++. +...+..+ ++|+.|++++|.+++. ++..
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 67777777777666555544444444 66666666655521 12223333 4555555555555432 1122
Q ss_pred ccCCCccceeecccccCCCC----CchhhhCCCCCcEEEeeCccCcCC----CCCCCCCCCcccEEECCCCcCC
Q 009771 272 LFRLTNIEYLSLGFNRFNGS----IPREIVNLKNLTSLSLGGNKLTGH----IPSTLGRLTSLQILDLSSNQLH 337 (526)
Q Consensus 272 l~~~~~L~~L~L~~n~l~g~----~p~~l~~~~~L~~L~l~~n~l~~~----~p~~l~~l~~L~~L~Ls~n~l~ 337 (526)
+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+.+. +...+..+++|++|++++|.++
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLT 234 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCc
Confidence 23334455555554444421 112223334444444444444321 1222333444444444444443
No 20
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.74 E-value=1.3e-19 Score=170.49 Aligned_cols=289 Identities=25% Similarity=0.308 Sum_probs=162.3
Q ss_pred eCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccC-CcC
Q 009771 107 DLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDG-NKL 185 (526)
Q Consensus 107 ~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~-n~l 185 (526)
+-++-+++ .+|..+. +.-..++|..|+|+...|..|+.+++|+.|||++|.|+..-|..|.++.+|.+|-+.+ |+|
T Consensus 52 dCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred EccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 33443443 3555443 4567788999999977777899999999999999999988888899998887776666 777
Q ss_pred CccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCC
Q 009771 186 SGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLG 265 (526)
Q Consensus 186 ~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~ 265 (526)
+..-.. .++++..|+.|.+.-|++.-...+.|..+++|..|.+.+|.+...--..+..+.+++.+.+..|.+.
T Consensus 129 ~~l~k~-------~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i 201 (498)
T KOG4237|consen 129 TDLPKG-------AFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI 201 (498)
T ss_pred hhhhhh-------HhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc
Confidence 643222 2467778888888888888777778888888888888888776433336777778888887777643
Q ss_pred CC------------CCccccCCCccceeecccccCCCCCchhhhCCCCCcEE--Ee-eCccCcCCCC-CCCCCCCcccEE
Q 009771 266 GP------------IPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSL--SL-GGNKLTGHIP-STLGRLTSLQIL 329 (526)
Q Consensus 266 ~~------------~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L--~l-~~n~l~~~~p-~~l~~l~~L~~L 329 (526)
.. .|..++...-..-..+.++++...-+..+.. .++.+ .+ +.+...+..| ..|..+++|+.|
T Consensus 202 cdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c--~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~l 279 (498)
T KOG4237|consen 202 CDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLC--SLESLPSRLSSEDFPDSICPAKCFKKLPNLRKL 279 (498)
T ss_pred cccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhh--hHHhHHHhhccccCcCCcChHHHHhhcccceEe
Confidence 11 1111111222222222222222111111111 01111 01 1111111111 134445555555
Q ss_pred ECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCc
Q 009771 330 DLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNK 407 (526)
Q Consensus 330 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 407 (526)
++++|++++.-+.+|.....+++|.|..|++...-...|..+..|+.|+|.+|+++-..|.+|..+.+|.+|++-.|.
T Consensus 280 nlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np 357 (498)
T KOG4237|consen 280 NLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNP 357 (498)
T ss_pred ccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCc
Confidence 555555555545555555555555555555443333344444455555555555544444444444444444444443
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.67 E-value=1e-18 Score=146.33 Aligned_cols=135 Identities=36% Similarity=0.619 Sum_probs=66.7
Q ss_pred cccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCC-CCCccccCCCc
Q 009771 199 EIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGG-PIPSTLFRLTN 277 (526)
Q Consensus 199 ~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~~~~ 277 (526)
.+..+.+|+.|++++|++. ++|.+++.+++|+.|+++-|++. ..|..|+.++.|+.|++..|++.. .+|..|..++.
T Consensus 51 nia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~t 128 (264)
T KOG0617|consen 51 NIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTT 128 (264)
T ss_pred cHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHH
Confidence 3344444444555444444 34444555555555555444443 344445555555555554444432 34444555555
Q ss_pred cceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCC
Q 009771 278 IEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLH 337 (526)
Q Consensus 278 L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 337 (526)
|+.|++++|.|. .+|..++++++|+.|.+.+|.+- .+|..++.++.|++|++.+|+++
T Consensus 129 lralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 129 LRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred HHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 555555555554 44555555555555555555544 34444444444444444444444
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.67 E-value=1.4e-18 Score=145.41 Aligned_cols=162 Identities=36% Similarity=0.576 Sum_probs=83.7
Q ss_pred CCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccC
Q 009771 123 SLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIES 202 (526)
Q Consensus 123 ~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~ 202 (526)
++.+.+.|.||+|.++ .+|+.+..+.+|+.|++++|++. .+|.++..+++|+.|+++-|++. .+|..++.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~--------~lprgfgs 100 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN--------ILPRGFGS 100 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh--------cCccccCC
Confidence 3444555556666655 44555556666666666666654 45555555555555555555443 23333344
Q ss_pred CCCCCEEEccCCcCCC-cCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCcccee
Q 009771 203 LRNLQWLDLSSNKLSG-TIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYL 281 (526)
Q Consensus 203 l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L 281 (526)
++.|+.||+.+|++.. .+|..|..+..|+.|++++|.+. .+|..++++++|+.|
T Consensus 101 ~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-------------------------~lp~dvg~lt~lqil 155 (264)
T KOG0617|consen 101 FPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-------------------------ILPPDVGKLTNLQIL 155 (264)
T ss_pred CchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-------------------------cCChhhhhhcceeEE
Confidence 4455555555544432 23333444444444444444443 344444445555555
Q ss_pred ecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCC
Q 009771 282 SLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLG 321 (526)
Q Consensus 282 ~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~ 321 (526)
.+.+|.+- .+|..++.+++|+.|++.+|+++ .+|+.++
T Consensus 156 ~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~ 193 (264)
T KOG0617|consen 156 SLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELA 193 (264)
T ss_pred eeccCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhh
Confidence 55555444 35666666666666666666665 3444343
No 23
>PLN03150 hypothetical protein; Provisional
Probab=99.62 E-value=3e-15 Score=159.39 Aligned_cols=154 Identities=32% Similarity=0.543 Sum_probs=118.2
Q ss_pred CCchhHHHHHHHHHHhccCC--CCCCCCCCCCCCCCC-----cccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCC
Q 009771 31 TNISIHVAASEIERQALLNS--GWWKDRIPQNTSDHC-----GWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNL 103 (526)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~~~--~~w~~~~~~~~~~~C-----~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L 103 (526)
.+.+.|..|+..+|+++... .+|. +|+| .|.||.|+.... + ....+
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~~~W~-------g~~C~p~~~~w~Gv~C~~~~~-~-------------------~~~~v 420 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLRFGWN-------GDPCVPQQHPWSGADCQFDST-K-------------------GKWFI 420 (623)
T ss_pred ccCchHHHHHHHHHHhcCCcccCCCC-------CCCCCCcccccccceeeccCC-C-------------------CceEE
Confidence 44556888999999887642 2663 3555 699999963111 0 01135
Q ss_pred CEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 009771 104 QYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGN 183 (526)
Q Consensus 104 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 183 (526)
+.|+|++|.+.|.+|..++.+++|++|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|..++++++|++|+|++|
T Consensus 421 ~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N 500 (623)
T PLN03150 421 DGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500 (623)
T ss_pred EEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC
Confidence 67888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCcccccCcccccCCCCCCEEEccCCcCC
Q 009771 184 KLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLS 217 (526)
Q Consensus 184 ~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~ 217 (526)
.++|.+|..+.. ...++..+++.+|...
T Consensus 501 ~l~g~iP~~l~~------~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 501 SLSGRVPAALGG------RLLHRASFNFTDNAGL 528 (623)
T ss_pred cccccCChHHhh------ccccCceEEecCCccc
Confidence 988887765431 1234566777776543
No 24
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=1.9e-15 Score=149.80 Aligned_cols=94 Identities=34% Similarity=0.501 Sum_probs=77.5
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCcc--------ccccccccCCCccccccccCCCCCCcccch-HHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGEL--------LSSLSSSSGPKIMLINVLDQRLSPPVNQKI-VQDI 501 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~--------~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~-~~~~ 501 (526)
.+.|||..+.++++|+||||||||+||++|||+|.+. ++.|+.....+..+.+++|+++... ... .+++
T Consensus 244 Y~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~--~~~~~~~~ 321 (361)
T KOG1187|consen 244 YLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEG--EYPDEKEV 321 (361)
T ss_pred cCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCC--CCChHHHH
Confidence 4679999999999999999999999999999988552 4556544444556888999998632 223 2789
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccC
Q 009771 502 ILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 502 ~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.++.++|+.|++++|.+||+|.||+
T Consensus 322 ~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 322 KKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred HHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 9999999999999999999999984
No 25
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.26 E-value=3.8e-13 Score=125.60 Aligned_cols=203 Identities=21% Similarity=0.279 Sum_probs=115.6
Q ss_pred CcccccCCCCCCEEEccCCcCCCcCchh----hcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCcc
Q 009771 196 IPIEIESLRNLQWLDLSSNKLSGTIPKE----IGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPST 271 (526)
Q Consensus 196 ip~~l~~l~~L~~L~l~~n~l~~~~p~~----l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~ 271 (526)
+-+.+..+++|+.|+||+|.+....++. +.++..|++|.|.+|.+.-.--..++. .|..|. .+..
T Consensus 84 l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~kk------- 152 (382)
T KOG1909|consen 84 LSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNKK------- 152 (382)
T ss_pred HHHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHhc-------
Confidence 3344555667777777777766554443 345667777777777665221111111 122221 1111
Q ss_pred ccCCCccceeecccccCCCC----CchhhhCCCCCcEEEeeCccCcCC----CCCCCCCCCcccEEECCCCcCCCC----
Q 009771 272 LFRLTNIEYLSLGFNRFNGS----IPREIVNLKNLTSLSLGGNKLTGH----IPSTLGRLTSLQILDLSSNQLHSS---- 339 (526)
Q Consensus 272 l~~~~~L~~L~L~~n~l~g~----~p~~l~~~~~L~~L~l~~n~l~~~----~p~~l~~l~~L~~L~Ls~n~l~~~---- 339 (526)
...-++|+++..++|++... +...+...+.|+.+.++.|.+... +...+..+++|+.|||.+|.++..
T Consensus 153 ~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~ 232 (382)
T KOG1909|consen 153 AASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVA 232 (382)
T ss_pred cCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHH
Confidence 11224566666666655422 122344556677777776665421 123445667777777777766532
Q ss_pred CcccccCCCCCCeecCcCCcCcccCcccc-----cCCCCCCEEecCCCcCccc----chHHhhcCcCCCEEEccCCcCc
Q 009771 340 IPLVIGNFSALSYLDLSDNRICGIIPDEL-----TKLSHLKYLNLSSNLLSGQ----IPFAIGKLFNLASLDLSKNKLS 409 (526)
Q Consensus 340 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~ 409 (526)
+...+..++.|+.|++++|.+.......+ ...++|+.|.+.+|.++-. +..++...+.|..|++++|.+.
T Consensus 233 LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 233 LAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 33345566677777777777654433332 2357888888888887632 3345566788899999999884
No 26
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.23 E-value=4.5e-13 Score=132.29 Aligned_cols=196 Identities=30% Similarity=0.514 Sum_probs=141.1
Q ss_pred CCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEE
Q 009771 99 CFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 178 (526)
.+.--...|++.|++. .+|..+..+..|+.+.|++|.+- .||..++++..|.+|||+.|+++ .+|..++.|+ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3445566778888876 67777777778888888888876 67778888888888888888886 6777777664 7888
Q ss_pred EccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeee
Q 009771 179 SLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALS 258 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 258 (526)
-+++|+++ .+|..++.+..|..||.+.|++. .+|..++.+.+|+.|.+..|++. .+|..+..+ .|..||
T Consensus 149 i~sNNkl~--------~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lD 217 (722)
T KOG0532|consen 149 IVSNNKLT--------SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLD 217 (722)
T ss_pred EEecCccc--------cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeee
Confidence 88888876 45566677778888888888876 56777788888888888888877 456666633 577788
Q ss_pred cccccCCCCCCccccCCCccceeecccccCCCCCchhhhC---CCCCcEEEeeCcc
Q 009771 259 MDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVN---LKNLTSLSLGGNK 311 (526)
Q Consensus 259 l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~---~~~L~~L~l~~n~ 311 (526)
++.|+++ .+|..|.+++.|++|.|.+|.+.. .|..+.- ..=.++|+..-++
T Consensus 218 fScNkis-~iPv~fr~m~~Lq~l~LenNPLqS-PPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 218 FSCNKIS-YLPVDFRKMRHLQVLQLENNPLQS-PPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred cccCcee-ecchhhhhhhhheeeeeccCCCCC-ChHHHHhccceeeeeeecchhcc
Confidence 8888775 677778888888888888887763 3443332 1223556555553
No 27
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.23 E-value=1.9e-11 Score=124.48 Aligned_cols=196 Identities=42% Similarity=0.603 Sum_probs=89.6
Q ss_pred EEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCC-CCCEEEccCCcCCccCCcccccCcccccCCCCCC
Q 009771 129 YIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVR-NLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQ 207 (526)
Q Consensus 129 ~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~ 207 (526)
.++++.|.+...+ ..+..++.++.|++.+|.++ .++...+.+. +|+.|++++|.+. .+|..+..+++|+
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~--------~l~~~~~~l~~L~ 166 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE--------SLPSPLRNLPNLK 166 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh--------hhhhhhhcccccc
Confidence 3555555443222 22333355555555555554 4444444442 5555555555544 2222344555555
Q ss_pred EEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeeccccc
Q 009771 208 WLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNR 287 (526)
Q Consensus 208 ~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~ 287 (526)
.|++++|++. .+|...+..+.|+.|++++|++. .+|........|+.+.+++|... ..+..+..++++..+.+.+|+
T Consensus 167 ~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~ 243 (394)
T COG4886 167 NLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNK 243 (394)
T ss_pred ccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCce
Confidence 5555555554 33333334455555555555554 33333333344555555555311 223334444444444444444
Q ss_pred CCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCC
Q 009771 288 FNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSI 340 (526)
Q Consensus 288 l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 340 (526)
+.. ++..+..+++++.|++++|.++.. +. ++.+.+++.|++++|.+....
T Consensus 244 ~~~-~~~~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 244 LED-LPESIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred eee-ccchhccccccceecccccccccc-cc-ccccCccCEEeccCccccccc
Confidence 432 233444444455555555554422 11 444445555555555444333
No 28
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.23 E-value=2.1e-11 Score=124.20 Aligned_cols=200 Identities=41% Similarity=0.592 Sum_probs=157.0
Q ss_pred EEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCC-CCCEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 009771 105 YLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLR-NLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGN 183 (526)
Q Consensus 105 ~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 183 (526)
.+++..+.+...+ ..+..++.++.|++.+|.++ .+|.....+. +|++|++++|.+. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5777777764332 34556688999999999988 6777777774 9999999999987 66667889999999999999
Q ss_pred cCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeeccccc
Q 009771 184 KLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANN 263 (526)
Q Consensus 184 ~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 263 (526)
+++. +|...+..++|+.|++++|++. .+|..+.....|+++.+++|... ..+..+.++.++..+.+.+|.
T Consensus 174 ~l~~--------l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~ 243 (394)
T COG4886 174 DLSD--------LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNK 243 (394)
T ss_pred hhhh--------hhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCce
Confidence 9873 4444447889999999999987 66766666677999999999643 345667888889999888887
Q ss_pred CCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCC
Q 009771 264 LGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTL 320 (526)
Q Consensus 264 l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l 320 (526)
+.. ++..+..+++++.|++++|.++. ++. ++...+++.|++++|.+....|...
T Consensus 244 ~~~-~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 244 LED-LPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred eee-ccchhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchhhh
Confidence 653 36677888889999999999884 443 8888999999999999987665543
No 29
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.22 E-value=6.2e-13 Score=131.36 Aligned_cols=172 Identities=32% Similarity=0.491 Sum_probs=95.3
Q ss_pred CCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCC
Q 009771 126 NLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRN 205 (526)
Q Consensus 126 ~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~ 205 (526)
--...||+.|.+. .+|..+..+..|+.+.|+.|.+. .+|..++++..|.+++++.|+++ .+|..+..++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS--------~lp~~lC~lp- 144 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS--------HLPDGLCDLP- 144 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh--------cCChhhhcCc-
Confidence 3344555566555 45555555555666666666554 55555666666666666666554 2233333333
Q ss_pred CCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeeccc
Q 009771 206 LQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGF 285 (526)
Q Consensus 206 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~ 285 (526)
|+.|.+++|+++ .+|..++...+|..|+.+.|.+. .+|..++.+.+|+.|.+..|++. .+|..+.. -.|..||++.
T Consensus 145 Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfSc 220 (722)
T KOG0532|consen 145 LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSC 220 (722)
T ss_pred ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-Cceeeeeccc
Confidence 555666665554 45555555556666666666554 34555556666666666655554 34444442 2355566666
Q ss_pred ccCCCCCchhhhCCCCCcEEEeeCccCc
Q 009771 286 NRFNGSIPREIVNLKNLTSLSLGGNKLT 313 (526)
Q Consensus 286 n~l~g~~p~~l~~~~~L~~L~l~~n~l~ 313 (526)
|+++ .+|..|.+++.|++|-|.+|.+.
T Consensus 221 Nkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 221 NKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred Ccee-ecchhhhhhhhheeeeeccCCCC
Confidence 6655 45556666666666666666655
No 30
>PLN03150 hypothetical protein; Provisional
Probab=99.17 E-value=4.8e-11 Score=127.39 Aligned_cols=111 Identities=31% Similarity=0.538 Sum_probs=96.2
Q ss_pred CCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCc
Q 009771 150 NLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRN 229 (526)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 229 (526)
.++.|+|++|.+.|.+|..++++++|+.|+|++|.++|.+|. .++.+++|+.|++++|+++|.+|..++++++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~-------~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~ 491 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPP-------SLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCCh-------HHhCCCCCCEEECCCCCCCCCCchHHhcCCC
Confidence 478899999999999999999999999999999999987665 4578889999999999999999999999999
Q ss_pred cCcccccccccCCCCchhhhcC-cCCCeeecccccCCCC
Q 009771 230 LKELDLSSNKLGGVLPQEIENL-KSLTALSMDANNLGGP 267 (526)
Q Consensus 230 L~~L~l~~n~l~~~~p~~l~~l-~~L~~L~l~~n~l~~~ 267 (526)
|+.|+|++|+++|.+|..++.. .++..+++.+|.....
T Consensus 492 L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~ 530 (623)
T PLN03150 492 LRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCG 530 (623)
T ss_pred CCEEECcCCcccccCChHHhhccccCceEEecCCccccC
Confidence 9999999999999999988764 4677888888865433
No 31
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.13 E-value=4.1e-11 Score=130.65 Aligned_cols=133 Identities=25% Similarity=0.357 Sum_probs=98.6
Q ss_pred cCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCcc--CCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCC
Q 009771 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENN--LTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRN 174 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~--~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 174 (526)
.......+.+.+.+|.+. .++... .+++|++|-+..|. +....++.|..++.|++|||++|.-.+.+|..++++-+
T Consensus 519 ~~~~~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~ 596 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVH 596 (889)
T ss_pred ccchhheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhh
Confidence 444567777777777664 233332 34578899888886 44333445778999999999988777789999999999
Q ss_pred CCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccc
Q 009771 175 LETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNK 239 (526)
Q Consensus 175 L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 239 (526)
||+|+++++.+. .+|..++++.+|.+|++..+.....+|.....+++|++|.+....
T Consensus 597 LryL~L~~t~I~--------~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 597 LRYLDLSDTGIS--------HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hhcccccCCCcc--------ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 999999988876 567778888899999988877655566666668888888876654
No 32
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.11 E-value=4.2e-12 Score=118.73 Aligned_cols=243 Identities=22% Similarity=0.299 Sum_probs=119.3
Q ss_pred cCCCCCCCEEeCCCCCCCCC----CchhccCCCCCCEEEccCccCCc----cCCcc-------cCCCCCCCEEEccCCCC
Q 009771 97 FSCFPNLQYLDLGSNNLSGS----IPSQIDSLSNLTYIYLYENNLTG----TIPKE-------IGSLRNLEVLDLGSNNL 161 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~----~p~~l~~l~~L~~L~Ls~n~~~~----~ip~~-------l~~l~~L~~L~L~~n~l 161 (526)
+..+..++.++|++|.|... +-..+.+.++|+..++++- ++| .+|+. +-.+++|++||||.|.|
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 44556677777777776432 4445566667777777653 333 23332 23455666666666666
Q ss_pred CCCCccc----cCCCCCCCEEEccCCcCCccCCccccc------CcccccCCCCCCEEEccCCcCCCcCchhhcCcCccC
Q 009771 162 NGTIPIE----IGSVRNLETLSLDGNKLSGVLPIYFGT------IPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLK 231 (526)
Q Consensus 162 ~~~~p~~----l~~l~~L~~L~L~~n~l~~~~p~~~~~------ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~ 231 (526)
.-..+.. +..+..|++|.|.+|.+.-.--..++. .-.-.++-++|+++...+|++.......
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~-------- 176 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATA-------- 176 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHH--------
Confidence 4333332 234555666666655443111000000 0001122334444444444443221110
Q ss_pred cccccccccCCCCchhhhcCcCCCeeecccccCCCC----CCccccCCCccceeecccccCCCC----CchhhhCCCCCc
Q 009771 232 ELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGP----IPSTLFRLTNIEYLSLGFNRFNGS----IPREIVNLKNLT 303 (526)
Q Consensus 232 ~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~----~p~~l~~~~~L~~L~L~~n~l~g~----~p~~l~~~~~L~ 303 (526)
+...|...+.|+.+.+..|.+... +...+..+++|+.|+|.+|.|+.. +...+..+++|+
T Consensus 177 ------------~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~ 244 (382)
T KOG1909|consen 177 ------------LAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLR 244 (382)
T ss_pred ------------HHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchhe
Confidence 112233444555555555544321 112334455666666666655432 223344455666
Q ss_pred EEEeeCccCcCCCCCCC-----CCCCcccEEECCCCcCCCC----CcccccCCCCCCeecCcCCcC
Q 009771 304 SLSLGGNKLTGHIPSTL-----GRLTSLQILDLSSNQLHSS----IPLVIGNFSALSYLDLSDNRI 360 (526)
Q Consensus 304 ~L~l~~n~l~~~~p~~l-----~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~n~l 360 (526)
.|++++|.+...-...+ ...++|+.|.+.+|.++.. +...+...+.|..|+|++|++
T Consensus 245 El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 245 ELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred eecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 66666666543211111 2246777777777777532 223345567788888888887
No 33
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=3.3e-11 Score=115.88 Aligned_cols=209 Identities=22% Similarity=0.212 Sum_probs=105.3
Q ss_pred CCCCCCEEEccCccCCccCC--cccCCCCCCCEEEccCCCCCCC--CccccCCCCCCCEEEccCCcCCccCCcccccCcc
Q 009771 123 SLSNLTYIYLYENNLTGTIP--KEIGSLRNLEVLDLGSNNLNGT--IPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPI 198 (526)
Q Consensus 123 ~l~~L~~L~Ls~n~~~~~ip--~~l~~l~~L~~L~L~~n~l~~~--~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~ 198 (526)
++.+|+.+.|.++... ..+ .....|++++.|||++|-+..- +-.....+++|+.|+|+.|.+........
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~----- 192 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNT----- 192 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccc-----
Confidence 4555555555555443 112 1334555666666665554421 11223445566666666665543222111
Q ss_pred cccCCCCCCEEEccCCcCCCc-CchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCC-CCccccCCC
Q 009771 199 EIESLRNLQWLDLSSNKLSGT-IPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGP-IPSTLFRLT 276 (526)
Q Consensus 199 ~l~~l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~-~p~~l~~~~ 276 (526)
-..++.|+.|.++.|.++-. +..-...+|+|+.|++..|..-+.-......+..|+.|+|++|++-.. .-...+.++
T Consensus 193 -~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~ 271 (505)
T KOG3207|consen 193 -TLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLP 271 (505)
T ss_pred -hhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccccccccccccc
Confidence 12345566666666666522 122233556666666666642222222334455666677766665421 113345566
Q ss_pred ccceeecccccCCCC-Cch-----hhhCCCCCcEEEeeCccCcCC-CCCCCCCCCcccEEECCCCcCCC
Q 009771 277 NIEYLSLGFNRFNGS-IPR-----EIVNLKNLTSLSLGGNKLTGH-IPSTLGRLTSLQILDLSSNQLHS 338 (526)
Q Consensus 277 ~L~~L~L~~n~l~g~-~p~-----~l~~~~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~Ls~n~l~~ 338 (526)
.|+.|+++.+.+... +|+ ....+++|++|++..|++..- .-..+..+++|+.|.+..|.+..
T Consensus 272 ~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 272 GLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred chhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 666666666655431 121 134467777787777777421 11223345566666666666654
No 34
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.99 E-value=3.6e-10 Score=99.31 Aligned_cols=108 Identities=29% Similarity=0.421 Sum_probs=27.3
Q ss_pred CCCCCCEEeCCCCCCCCCCchhcc-CCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCcccc-CCCCCCC
Q 009771 99 CFPNLQYLDLGSNNLSGSIPSQID-SLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEI-GSVRNLE 176 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~~p~~l~-~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~ 176 (526)
+..++++|+|.+|.++. + +.++ .+.+|+.|++++|.++. + +.+..+++|++|++++|.++. +...+ ..+++|+
T Consensus 17 n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--
T ss_pred ccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCCc-cccchHHhCCcCC
Confidence 34456666666666652 2 2343 35666666666666653 2 235556666666666666653 32222 2456666
Q ss_pred EEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCC
Q 009771 177 TLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLS 217 (526)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~ 217 (526)
+|++++|++..... + ..+..+++|+.|++.+|.++
T Consensus 92 ~L~L~~N~I~~l~~-----l-~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 92 ELYLSNNKISDLNE-----L-EPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EEE-TTS---SCCC-----C-GGGGG-TT--EEE-TT-GGG
T ss_pred EEECcCCcCCChHH-----h-HHHHcCCCcceeeccCCccc
Confidence 66666666543211 1 12344555555555555544
No 35
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.98 E-value=3.2e-10 Score=123.80 Aligned_cols=179 Identities=25% Similarity=0.326 Sum_probs=111.3
Q ss_pred CCCCCEEeCCCCC--CCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCE
Q 009771 100 FPNLQYLDLGSNN--LSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLET 177 (526)
Q Consensus 100 l~~L~~L~l~~n~--~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 177 (526)
.++|+.|-+..|. +....+..|..++.|++|||++|.--+.+|..++++-+|++|+|+++.+. .+|..++++.+|.+
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 4478888888875 43333445778999999999988777789999999999999999999987 78999999999999
Q ss_pred EEccCCcCCccCCcccccCcccccCCCCCCEEEccCCc--CCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCC
Q 009771 178 LSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNK--LSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLT 255 (526)
Q Consensus 178 L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~--l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~ 255 (526)
|++..+.....+|. ....+++|++|.+..-. .+...-..+.++.+|+.+....... .+-..+..++.|.
T Consensus 623 Lnl~~~~~l~~~~~-------i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~ 693 (889)
T KOG4658|consen 623 LNLEVTGRLESIPG-------ILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLR 693 (889)
T ss_pred eccccccccccccc-------hhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHH
Confidence 99988765544332 23458889999886543 2222223344445555554433222 1111222333332
Q ss_pred ----eeecccccCCCCCCccccCCCccceeecccccCC
Q 009771 256 ----ALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFN 289 (526)
Q Consensus 256 ----~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~ 289 (526)
.+.+.++.. ...+..+..+.+|+.|.+.++.+.
T Consensus 694 ~~~~~l~~~~~~~-~~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 694 SLLQSLSIEGCSK-RTLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred HHhHhhhhccccc-ceeecccccccCcceEEEEcCCCc
Confidence 222212111 123344555666666666666554
No 36
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.98 E-value=8.2e-11 Score=113.18 Aligned_cols=185 Identities=24% Similarity=0.255 Sum_probs=112.4
Q ss_pred CCCCCCCEEEccCCCCCCCCc--cccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchh
Q 009771 146 GSLRNLEVLDLGSNNLNGTIP--IEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKE 223 (526)
Q Consensus 146 ~~l~~L~~L~L~~n~l~~~~p--~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~ 223 (526)
.++++|+...|.++.+. ..+ .....+++++.|||++|-|+...| +-.-...+++|+.|+++.|++.-.....
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~-----v~~i~eqLp~Le~LNls~Nrl~~~~~s~ 191 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFP-----VLKIAEQLPSLENLNLSSNRLSNFISSN 191 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHH-----HHHHHHhcccchhcccccccccCCcccc
Confidence 46788999999888875 233 245678999999999998774332 2223457788999999988876332221
Q ss_pred -hcCcCccCcccccccccCCC-CchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCC-chhhhCCC
Q 009771 224 -IGSLRNLKELDLSSNKLGGV-LPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSI-PREIVNLK 300 (526)
Q Consensus 224 -l~~l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~-p~~l~~~~ 300 (526)
-..++.|+.|.++.|.++-. +-..+..+|+|+.|++..|...........-+..|+.|+|++|.+...- -...+.++
T Consensus 192 ~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~ 271 (505)
T KOG3207|consen 192 TTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLP 271 (505)
T ss_pred chhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccccccccccccc
Confidence 12456777888888877622 2223445677777777777522222222333566777777777665321 12345566
Q ss_pred CCcEEEeeCccCcCC-CCCC-----CCCCCcccEEECCCCcC
Q 009771 301 NLTSLSLGGNKLTGH-IPST-----LGRLTSLQILDLSSNQL 336 (526)
Q Consensus 301 ~L~~L~l~~n~l~~~-~p~~-----l~~l~~L~~L~Ls~n~l 336 (526)
.|+.|+++.+.+... .|+. ...+++|++|++..|++
T Consensus 272 ~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 272 GLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNI 313 (505)
T ss_pred chhhhhccccCcchhcCCCccchhhhcccccceeeecccCcc
Confidence 677777766666532 2222 23345566666666655
No 37
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.96 E-value=1.7e-10 Score=105.75 Aligned_cols=129 Identities=26% Similarity=0.348 Sum_probs=68.0
Q ss_pred CCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECC
Q 009771 253 SLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLS 332 (526)
Q Consensus 253 ~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls 332 (526)
.|+.++++.|.++ .+..+..-.+.++.|++++|.+... ..+..+++|+.||+++|.++. +..+-.++.+++.|.|+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcCEeeeehh
Confidence 3444444444433 2333333444555555555555421 235555666666666665552 22222344556666666
Q ss_pred CCcCCCCCcccccCCCCCCeecCcCCcCccc-CcccccCCCCCCEEecCCCcCccc
Q 009771 333 SNQLHSSIPLVIGNFSALSYLDLSDNRICGI-IPDELTKLSHLKYLNLSSNLLSGQ 387 (526)
Q Consensus 333 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~ 387 (526)
+|.+.. -..++.+.+|.+||+++|++... -...++++|.|+++.|.+|.+.+.
T Consensus 361 ~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 361 QNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 665532 12345566667777777766532 123466777777777777777643
No 38
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.94 E-value=9.7e-10 Score=96.56 Aligned_cols=128 Identities=32% Similarity=0.399 Sum_probs=41.7
Q ss_pred hccCCCCCCEEEccCccCCccCCcccC-CCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcc
Q 009771 120 QIDSLSNLTYIYLYENNLTGTIPKEIG-SLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPI 198 (526)
Q Consensus 120 ~l~~l~~L~~L~Ls~n~~~~~ip~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~ 198 (526)
.+.+..++++|+|.+|.++. | +.++ .+.+|+.|+|++|.++. + +.+..+++|++|++++|.++... .
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~~i~--------~ 81 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRISSIS--------E 81 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-C--------H
T ss_pred cccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCCccc--------c
Confidence 34456678888888888873 3 3455 57788888888888873 3 25667788888888888877431 1
Q ss_pred cc-cCCCCCCEEEccCCcCCCc-CchhhcCcCccCcccccccccCCCC---chhhhcCcCCCeeec
Q 009771 199 EI-ESLRNLQWLDLSSNKLSGT-IPKEIGSLRNLKELDLSSNKLGGVL---PQEIENLKSLTALSM 259 (526)
Q Consensus 199 ~l-~~l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~---p~~l~~l~~L~~L~l 259 (526)
.+ ..+++|++|++++|++... .-..++.+++|+.|++.+|.++..- ...+..+|+|+.||-
T Consensus 82 ~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 82 GLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp HHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred chHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 22 2467788888888877542 1234566677777777777665321 112445566666654
No 39
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.87 E-value=2.7e-10 Score=104.41 Aligned_cols=129 Identities=33% Similarity=0.428 Sum_probs=79.9
Q ss_pred CCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEec
Q 009771 300 KNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNL 379 (526)
Q Consensus 300 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 379 (526)
+.|+.+|+++|.++ .+.++..-++.++.|+++.|.+... ..+..+++|+.|||++|.++. +..+-.++.+++.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcCEeeeeh
Confidence 44555566655555 3344444555666666666665422 124556666666666666552 2233345666777777
Q ss_pred CCCcCcccchHHhhcCcCCCEEEccCCcCccc-ccccccCCCCCCeEEcCCCCCCc
Q 009771 380 SSNLLSGQIPFAIGKLFNLASLDLSKNKLSGS-IPTEIGNCSELRNLTLNHNSLNG 434 (526)
Q Consensus 380 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~l~l~~n~l~~ 434 (526)
++|.+.. -..++.+.+|.+||+++|++... -...+++++.|+.+.+.+|++..
T Consensus 360 a~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 360 AQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 7776642 24566677788888888877642 23467888888888888988863
No 40
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.86 E-value=4.3e-10 Score=114.92 Aligned_cols=128 Identities=32% Similarity=0.489 Sum_probs=62.0
Q ss_pred CCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEE
Q 009771 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLS 179 (526)
Q Consensus 100 l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 179 (526)
+..++.+++..|.+.. +-..+..+++|+.|++.+|.+.+. ...+..+++|++|++++|.++... .+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 3444445555555442 223345556666666666665532 222445566666666666654321 234445555566
Q ss_pred ccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc-hhhcCcCccCcccccccccC
Q 009771 180 LDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP-KEIGSLRNLKELDLSSNKLG 241 (526)
Q Consensus 180 L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~ 241 (526)
+++|.++..- .+..++.|+.+++++|++...-+ . ...+.+++.+++.+|.+.
T Consensus 147 l~~N~i~~~~---------~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 147 LSGNLISDIS---------GLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred eccCcchhcc---------CCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh
Confidence 6665554321 12234555555555555543322 1 234455555555555443
No 41
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.77 E-value=5.3e-09 Score=75.44 Aligned_cols=59 Identities=39% Similarity=0.518 Sum_probs=31.0
Q ss_pred CCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCc
Q 009771 126 NLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNK 184 (526)
Q Consensus 126 ~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 184 (526)
+|++|++++|+++...+..|.++++|++|++++|.+....|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555554433445555555555555555554444445555555555555554
No 42
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=6e-09 Score=75.17 Aligned_cols=61 Identities=44% Similarity=0.632 Sum_probs=55.8
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCC
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNL 161 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l 161 (526)
|+|++|++++|+++...+..|.++++|++|++++|.+....|..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999999999976667899999999999999999988788999999999999999975
No 43
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.74 E-value=1.2e-09 Score=111.73 Aligned_cols=129 Identities=33% Similarity=0.444 Sum_probs=77.2
Q ss_pred cCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCccccc
Q 009771 122 DSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIE 201 (526)
Q Consensus 122 ~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~ 201 (526)
..+..++.+++..|.+.. +-..+..+++|+.|++.+|.+.. +...+..+++|++|++++|.|+...+ +.
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~---------l~ 137 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEG---------LS 137 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccc---------hh
Confidence 345666666677777663 23446677788888888887763 33235667777777777777765432 34
Q ss_pred CCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCc-hhhhcCcCCCeeecccccC
Q 009771 202 SLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLP-QEIENLKSLTALSMDANNL 264 (526)
Q Consensus 202 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~l 264 (526)
.++.|+.|++++|.+... ..+..++.|+.+++++|.+...-+ . ...+.+++.+++.+|.+
T Consensus 138 ~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i 198 (414)
T KOG0531|consen 138 TLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSI 198 (414)
T ss_pred hccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCch
Confidence 555677777777766522 234446666666666666654322 1 34455555555555544
No 44
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=98.53 E-value=1.7e-08 Score=100.19 Aligned_cols=78 Identities=28% Similarity=0.431 Sum_probs=57.4
Q ss_pred Cchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccC--CCCCCcccchHHHHHHHHHHHH
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQ--RLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~~la~ 509 (526)
.||.....+.+.|+|||||||++.|++| |+.|..... ...+.+.++. |+.++ ..|...|.+|..
T Consensus 372 APEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms--------n~ev~~~le~GyRlp~P-----~~CP~~vY~lM~ 438 (468)
T KOG0197|consen 372 APEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS--------NEEVLELLERGYRLPRP-----EGCPDEVYELMK 438 (468)
T ss_pred CHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC--------HHHHHHHHhccCcCCCC-----CCCCHHHHHHHH
Confidence 3888888999999999999999999997 776633211 0112233333 44332 347778889999
Q ss_pred hcCCCCCCCCCCcc
Q 009771 510 ACLSSQPKSRPTMQ 523 (526)
Q Consensus 510 ~C~~~~p~~RP~m~ 523 (526)
.|...+|++|||+.
T Consensus 439 ~CW~~~P~~RPtF~ 452 (468)
T KOG0197|consen 439 SCWHEDPEDRPTFE 452 (468)
T ss_pred HHhhCCcccCCCHH
Confidence 99999999999975
No 45
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=98.47 E-value=4.1e-08 Score=97.14 Aligned_cols=85 Identities=31% Similarity=0.453 Sum_probs=56.0
Q ss_pred CCchhcc--cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAH--TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~--~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||... ....++|+|||||||++.|++||+.|...+.. +. ....++.....+.... ++...+..+.-
T Consensus 211 MAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~------~~~~v~~~~~Rp~~p~---~~~~~l~~l~~ 280 (362)
T KOG0192|consen 211 MAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQ------VASAVVVGGLRPPIPK---ECPPHLSSLME 280 (362)
T ss_pred cChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HH------HHHHHHhcCCCCCCCc---cCCHHHHHHHH
Confidence 4577776 55899999999999999999999999654332 11 1112222222222111 13344445555
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|...+|++||++.|++
T Consensus 281 ~CW~~dp~~RP~f~ei~ 297 (362)
T KOG0192|consen 281 RCWLVDPSRRPSFLEIV 297 (362)
T ss_pred HhCCCCCCcCCCHHHHH
Confidence 69999999999998863
No 46
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.45 E-value=3.5e-08 Score=103.13 Aligned_cols=82 Identities=27% Similarity=0.341 Sum_probs=62.2
Q ss_pred Cchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
.||.....+.|+++||||||||+.|++| |+.|...+.. +.++..+-+.++. +..+.|..+|.+|.+.|
T Consensus 673 ppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn-------~EVIe~i~~g~lL----~~Pe~CP~~vY~LM~~C 741 (774)
T KOG1026|consen 673 PPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN-------QEVIECIRAGQLL----SCPENCPTEVYSLMLEC 741 (774)
T ss_pred CHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch-------HHHHHHHHcCCcc----cCCCCCCHHHHHHHHHH
Confidence 4788888899999999999999999996 8888543211 1123333333442 33456889999999999
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
.+..|.+||+++|+
T Consensus 742 W~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 742 WNENPKRRPSFKEI 755 (774)
T ss_pred hhcCcccCCCHHHH
Confidence 99999999999886
No 47
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.43 E-value=2.8e-08 Score=88.88 Aligned_cols=89 Identities=24% Similarity=0.261 Sum_probs=56.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCC--CCCc--ccchHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRL--SPPV--NQKIVQDIILVSTI 507 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l--~~~~--~~~~~~~~~~~~~l 507 (526)
..||.......+.|+|||||||+++|++||+.|........ .....++.... .+.. ......+...+.++
T Consensus 71 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (176)
T smart00750 71 MAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS------AILEILLNGMPADDPRDRSNLESVSAARSFADF 144 (176)
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc------HHHHHHHHHhccCCccccccHHHHHhhhhHHHH
Confidence 45888777788899999999999999999999954221110 00111111100 0000 01111111257889
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
...|++.+|++||++.|++
T Consensus 145 i~~cl~~~p~~Rp~~~~ll 163 (176)
T smart00750 145 MRVCASRLPQRREAANHYL 163 (176)
T ss_pred HHHHHhcccccccCHHHHH
Confidence 9999999999999998863
No 48
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.37 E-value=7.4e-08 Score=88.66 Aligned_cols=86 Identities=30% Similarity=0.408 Sum_probs=48.9
Q ss_pred CCCCCCEEEccCCCCCC--CCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCC-cCchh
Q 009771 147 SLRNLEVLDLGSNNLNG--TIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSG-TIPKE 223 (526)
Q Consensus 147 ~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~-~~p~~ 223 (526)
.++.++.+||.+|.++. .+...+.++|.|+.|+++.|.+...|. .+| .-..+|+.|.+.+..+.- .....
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~----~lp---~p~~nl~~lVLNgT~L~w~~~~s~ 141 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIK----SLP---LPLKNLRVLVLNGTGLSWTQSTSS 141 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccc----cCc---ccccceEEEEEcCCCCChhhhhhh
Confidence 34566666666666653 233334566666777776666654432 222 134567777776665542 22334
Q ss_pred hcCcCccCcccccccc
Q 009771 224 IGSLRNLKELDLSSNK 239 (526)
Q Consensus 224 l~~l~~L~~L~l~~n~ 239 (526)
+..+|++++|+++.|+
T Consensus 142 l~~lP~vtelHmS~N~ 157 (418)
T KOG2982|consen 142 LDDLPKVTELHMSDNS 157 (418)
T ss_pred hhcchhhhhhhhccch
Confidence 5566777777777763
No 49
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.32 E-value=1.2e-08 Score=93.83 Aligned_cols=156 Identities=24% Similarity=0.250 Sum_probs=68.3
Q ss_pred hcCcCCCeeecccccCCCCCCccccCCCccceeeccccc-CCCC-CchhhhCCCCCcEEEeeCccCcCCCCC-CCCC-CC
Q 009771 249 ENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNR-FNGS-IPREIVNLKNLTSLSLGGNKLTGHIPS-TLGR-LT 324 (526)
Q Consensus 249 ~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~-l~g~-~p~~l~~~~~L~~L~l~~n~l~~~~p~-~l~~-l~ 324 (526)
..+.+|+.|.+.++++.+.+...++...+|+.|+++.+. ++.. ..-.+.+|+.|..|+++.|.+....-. .+.. -+
T Consensus 207 s~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise 286 (419)
T KOG2120|consen 207 SQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISE 286 (419)
T ss_pred HHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhch
Confidence 344445555555555544444444444555555554432 1110 111244455555555555544322110 0000 12
Q ss_pred cccEEECCCCcC---CCCCcccccCCCCCCeecCcCC-cCcccCcccccCCCCCCEEecCCCcCcccchH---HhhcCcC
Q 009771 325 SLQILDLSSNQL---HSSIPLVIGNFSALSYLDLSDN-RICGIIPDELTKLSHLKYLNLSSNLLSGQIPF---AIGKLFN 397 (526)
Q Consensus 325 ~L~~L~Ls~n~l---~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---~~~~~~~ 397 (526)
.|+.|+++++.- ...+......+++|..|||++| .++......+-+++.|++|.++.|.. .+|. .+...++
T Consensus 287 ~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~ps 364 (419)
T KOG2120|consen 287 TLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPS 364 (419)
T ss_pred hhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcc
Confidence 445555554431 1122222345566666666665 23332333444556666666665542 2332 2344556
Q ss_pred CCEEEccCC
Q 009771 398 LASLDLSKN 406 (526)
Q Consensus 398 L~~L~l~~n 406 (526)
|.|||+.++
T Consensus 365 l~yLdv~g~ 373 (419)
T KOG2120|consen 365 LVYLDVFGC 373 (419)
T ss_pred eEEEEeccc
Confidence 666665443
No 50
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.32 E-value=1.7e-08 Score=96.53 Aligned_cols=84 Identities=26% Similarity=0.347 Sum_probs=52.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
+.||.......+.|+||||||++++|++| |+.|....... .....+.+...... ...+...+.++...
T Consensus 172 ~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~-------~~~~~~~~~~~~~~----~~~~~~~~~~li~~ 240 (259)
T PF07714_consen 172 LAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE-------EIIEKLKQGQRLPI----PDNCPKDIYSLIQQ 240 (259)
T ss_dssp S-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH-------HHHHHHHTTEETTS----BTTSBHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-------ccccccccccccee----ccchhHHHHHHHHH
Confidence 56888877789999999999999999999 67774322110 00111212111111 11123446688999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.|++
T Consensus 241 C~~~~p~~RPs~~~i~ 256 (259)
T PF07714_consen 241 CWSHDPEKRPSFQEIL 256 (259)
T ss_dssp HT-SSGGGS--HHHHH
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999999863
No 51
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.31 E-value=2.2e-07 Score=85.61 Aligned_cols=178 Identities=21% Similarity=0.265 Sum_probs=79.9
Q ss_pred CCCCCEEEccCccCCc--cCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCccccc
Q 009771 124 LSNLTYIYLYENNLTG--TIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIE 201 (526)
Q Consensus 124 l~~L~~L~Ls~n~~~~--~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~ 201 (526)
+++++.+||.+|.++. .|-..+.++|.|++|+|+.|++...|-..-.-+.+|+.|-|.+..+.- ......+.
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w------~~~~s~l~ 143 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSW------TQSTSSLD 143 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCCh------hhhhhhhh
Confidence 4555555555555542 222334455566666666655543322111233455555555554431 12222344
Q ss_pred CCCCCCEEEccCCcCC----------CcCch--hhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCC-
Q 009771 202 SLRNLQWLDLSSNKLS----------GTIPK--EIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPI- 268 (526)
Q Consensus 202 ~l~~L~~L~l~~n~l~----------~~~p~--~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~- 268 (526)
.++.++.|.++.|.+. ...|. .+...+++..+..+.|++... .+++..+.+..|.+....
T Consensus 144 ~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~-------Fpnv~sv~v~e~PlK~~s~ 216 (418)
T KOG2982|consen 144 DLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI-------FPNVNSVFVCEGPLKTESS 216 (418)
T ss_pred cchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh-------cccchheeeecCcccchhh
Confidence 5555555555555221 11110 111222333333333333322 245566666655443221
Q ss_pred CccccCCCccceeecccccCCCC-CchhhhCCCCCcEEEeeCccCcC
Q 009771 269 PSTLFRLTNIEYLSLGFNRFNGS-IPREIVNLKNLTSLSLGGNKLTG 314 (526)
Q Consensus 269 p~~l~~~~~L~~L~L~~n~l~g~-~p~~l~~~~~L~~L~l~~n~l~~ 314 (526)
-.....++.+..|.|+.|++..- --+.+..+++|..|.++++.+.+
T Consensus 217 ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 217 EKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred cccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 12233345555666666655421 11245556666666666666543
No 52
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.30 E-value=3.3e-08 Score=101.10 Aligned_cols=186 Identities=29% Similarity=0.327 Sum_probs=102.2
Q ss_pred CcccCCCCCCCEEEccCCCCCCCCccccCCC-CCCCEEEccCCcCC---ccCCcccccCcccccCCCCCCEEEccCCcCC
Q 009771 142 PKEIGSLRNLEVLDLGSNNLNGTIPIEIGSV-RNLETLSLDGNKLS---GVLPIYFGTIPIEIESLRNLQWLDLSSNKLS 217 (526)
Q Consensus 142 p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~L~~n~l~---~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~ 217 (526)
|-.+..+.+|+.|.|.++.+... ..+..+ ..|++|.-.+ .+. ..+..-.+.+-.++ --.+|...++++|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ns~-~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICHN-SLDALRHVFASCGGDISNSP-VWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccccch-hhhhHhhhhcchhhHH
Confidence 55667778888888888877531 111111 1233332221 110 00000000000000 1124666677777765
Q ss_pred CcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhh
Q 009771 218 GTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIV 297 (526)
Q Consensus 218 ~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~ 297 (526)
.+..++.-++.|+.|+|++|++... +.+..++.|++|||+.|.+.-.---....++ |+.|.+++|.++.. ..+.
T Consensus 178 -~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 -LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred -hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHH
Confidence 4445566667777777777777654 3667777777777777776632212222333 77777777776532 3466
Q ss_pred CCCCCcEEEeeCccCcCCC-CCCCCCCCcccEEECCCCcCC
Q 009771 298 NLKNLTSLSLGGNKLTGHI-PSTLGRLTSLQILDLSSNQLH 337 (526)
Q Consensus 298 ~~~~L~~L~l~~n~l~~~~-p~~l~~l~~L~~L~Ls~n~l~ 337 (526)
++++|+.||+++|-+.+.- -..++.+..|+.|.|.+|.+.
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 6777777777777666431 123455667777777777653
No 53
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.29 E-value=3.5e-08 Score=89.61 Aligned_cols=88 Identities=20% Similarity=0.176 Sum_probs=40.1
Q ss_pred CCcccEEECCCCcCCCC----CcccccCCCCCCeecCcCCcCcccCcccc------cCCCCCCEEecCCCcCcccch---
Q 009771 323 LTSLQILDLSSNQLHSS----IPLVIGNFSALSYLDLSDNRICGIIPDEL------TKLSHLKYLNLSSNLLSGQIP--- 389 (526)
Q Consensus 323 l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~------~~l~~L~~L~L~~n~l~~~~~--- 389 (526)
+.+|+.||+.+|.++-. +...+..++.|+.|.+.+|-++.....++ ...++|..|-..+|...+.+-
T Consensus 213 ~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~ 292 (388)
T COG5238 213 SHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDI 292 (388)
T ss_pred hCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeee
Confidence 34455555555544321 11222334445555555554443322211 123455555555555433211
Q ss_pred ---H-HhhcCcCCCEEEccCCcCcc
Q 009771 390 ---F-AIGKLFNLASLDLSKNKLSG 410 (526)
Q Consensus 390 ---~-~~~~~~~L~~L~l~~n~l~~ 410 (526)
. .-+.++-|..|.+.+|++..
T Consensus 293 ~l~~~e~~~~p~L~~le~ngNr~~E 317 (388)
T COG5238 293 SLNEFEQDAVPLLVDLERNGNRIKE 317 (388)
T ss_pred chhhhhhcccHHHHHHHHccCcchh
Confidence 1 12345566666777787764
No 54
>PHA02988 hypothetical protein; Provisional
Probab=98.29 E-value=8.9e-08 Score=92.85 Aligned_cols=85 Identities=28% Similarity=0.372 Sum_probs=53.2
Q ss_pred CCchhccc--ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHT--MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~--~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.... ...+.++|||||||+++|++||+.|...... ......++........ + ..+...+.++.-
T Consensus 187 ~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~~~~-~--~~~~~~l~~li~ 256 (283)
T PHA02988 187 FSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-------KEIYDLIINKNNSLKL-P--LDCPLEIKCIVE 256 (283)
T ss_pred cCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcCCCCCC-C--CcCcHHHHHHHH
Confidence 34666543 4678999999999999999999999643210 0001111111111111 1 112234567788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 257 ~cl~~dp~~Rps~~ell 273 (283)
T PHA02988 257 ACTSHDSIKRPNIKEIL 273 (283)
T ss_pred HHhcCCcccCcCHHHHH
Confidence 99999999999999874
No 55
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.29 E-value=1.2e-08 Score=93.79 Aligned_cols=193 Identities=23% Similarity=0.282 Sum_probs=122.2
Q ss_pred CCCEEEccCCcCCCc-CchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeeccccc-CCCC-CCccccCCCcccee
Q 009771 205 NLQWLDLSSNKLSGT-IPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANN-LGGP-IPSTLFRLTNIEYL 281 (526)
Q Consensus 205 ~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~-l~~~-~p~~l~~~~~L~~L 281 (526)
.|+++||++..++.. +..-++.+.+|+.|.+.++++...+...++...+|+.|+++.++ ++.. ....+.+++.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 477788877666532 22235677788888888888888877788888888888887654 2221 11234567888888
Q ss_pred ecccccCCCCCchhh-hC-CCCCcEEEeeCccCc---CCCCCCCCCCCcccEEECCCCcC-CCCCcccccCCCCCCeecC
Q 009771 282 SLGFNRFNGSIPREI-VN-LKNLTSLSLGGNKLT---GHIPSTLGRLTSLQILDLSSNQL-HSSIPLVIGNFSALSYLDL 355 (526)
Q Consensus 282 ~L~~n~l~g~~p~~l-~~-~~~L~~L~l~~n~l~---~~~p~~l~~l~~L~~L~Ls~n~l-~~~~~~~~~~l~~L~~L~L 355 (526)
++++|.++.+.-..+ .+ -++|+.|+++++.-. ..+..-...+++|..|||++|.. +......+..++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 888887664432211 11 256788888876421 11222235678899999988753 4444455677888999999
Q ss_pred cCCcCcccCcc---cccCCCCCCEEecCCCcCcccchHHhhcCcCCC
Q 009771 356 SDNRICGIIPD---ELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLA 399 (526)
Q Consensus 356 ~~n~l~~~~~~---~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~ 399 (526)
+.|. +.+|. .+...++|.+|+..++--.+........+++|+
T Consensus 346 sRCY--~i~p~~~~~l~s~psl~yLdv~g~vsdt~mel~~e~~~~lk 390 (419)
T KOG2120|consen 346 SRCY--DIIPETLLELNSKPSLVYLDVFGCVSDTTMELLKEMLSHLK 390 (419)
T ss_pred hhhc--CCChHHeeeeccCcceEEEEeccccCchHHHHHHHhCcccc
Confidence 8885 34554 356678899999877643333322333444443
No 56
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.29 E-value=9.3e-08 Score=103.64 Aligned_cols=83 Identities=30% Similarity=0.508 Sum_probs=61.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccc-cCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL-DQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
+.||+..++..++|+|||||||++.|++| |..|+.....+. .+..++ +-|+.++ ..|..++.+|..
T Consensus 871 m~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~-------v~~~~~~ggRL~~P-----~~CP~~ly~lM~ 938 (1025)
T KOG1095|consen 871 MPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE-------VLLDVLEGGRLDPP-----SYCPEKLYQLML 938 (1025)
T ss_pred CCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH-------HHHHHHhCCccCCC-----CCCChHHHHHHH
Confidence 34899999999999999999999999997 777755433321 111122 2255433 457778889999
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.+++
T Consensus 939 ~CW~~~pe~RP~F~~i~ 955 (1025)
T KOG1095|consen 939 QCWKHDPEDRPSFRTIV 955 (1025)
T ss_pred HHccCChhhCccHHHHH
Confidence 99999999999998764
No 57
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.26 E-value=1.7e-07 Score=90.79 Aligned_cols=92 Identities=20% Similarity=0.212 Sum_probs=57.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccC-------CCccccccccCCCCCCcccchHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSG-------PKIMLINVLDQRLSPPVNQKIVQDIILV 504 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~-------~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 504 (526)
..||.......+.++||||||++++|++||+.|............ ......+.++.....+. ......++
T Consensus 177 ~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 253 (283)
T cd05080 177 YAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPC---PKNCPQEV 253 (283)
T ss_pred eCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCC---CCCCCHHH
Confidence 356766666778999999999999999999999543221100000 00011122222221111 11234567
Q ss_pred HHHHHhcCCCCCCCCCCccccC
Q 009771 505 STIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 505 ~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.++...|++.+|++||+|++|+
T Consensus 254 ~~li~~cl~~~p~~Rps~~~i~ 275 (283)
T cd05080 254 YILMKNCWETEAKFRPTFRSLI 275 (283)
T ss_pred HHHHHHHhccChhhCCCHHHHH
Confidence 7899999999999999999873
No 58
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.23 E-value=3e-08 Score=101.33 Aligned_cols=127 Identities=31% Similarity=0.297 Sum_probs=87.1
Q ss_pred CCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecC
Q 009771 301 NLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLS 380 (526)
Q Consensus 301 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 380 (526)
.|.+.+.+.|.+. .+.+++.-++.++.|+|++|++.... .+..+++|++|||++|.+.-..--....+ +|..|+++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhh-hheeeeec
Confidence 4666777777776 34455666778888888888887533 66778888888888888763322222333 38888888
Q ss_pred CCcCcccchHHhhcCcCCCEEEccCCcCccccc-ccccCCCCCCeEEcCCCCCC
Q 009771 381 SNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIP-TEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 381 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~l~l~~n~l~ 433 (526)
+|.++.. ..+.++.+|..||+++|.+.+.-. .-+..+..|+.|++.+|++.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 8887632 456778888888888888776322 12345567778888888775
No 59
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=98.20 E-value=2.4e-07 Score=88.25 Aligned_cols=84 Identities=17% Similarity=0.290 Sum_probs=54.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+|||||++.|++||+.|..... .......++.....+ .....-.++.++...|
T Consensus 168 ~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~ 236 (256)
T cd08218 168 LSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-------MKNLVLKIIRGSYPP----VSSHYSYDLRNLVSQL 236 (256)
T ss_pred cCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-------HHHHHHHHhcCCCCC----CcccCCHHHHHHHHHH
Confidence 45777766778899999999999999999999853210 000011111111110 0111123456778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 237 l~~~p~~Rp~~~~vl 251 (256)
T cd08218 237 FKRNPRDRPSVNSIL 251 (256)
T ss_pred hhCChhhCcCHHHHh
Confidence 999999999999985
No 60
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.17 E-value=3.3e-07 Score=83.43 Aligned_cols=190 Identities=21% Similarity=0.240 Sum_probs=92.7
Q ss_pred CCCCCCEEeCCCCCCCCC----CchhccCCCCCCEEEccCccCCcc----CC-------cccCCCCCCCEEEccCCCCCC
Q 009771 99 CFPNLQYLDLGSNNLSGS----IPSQIDSLSNLTYIYLYENNLTGT----IP-------KEIGSLRNLEVLDLGSNNLNG 163 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~----~p~~l~~l~~L~~L~Ls~n~~~~~----ip-------~~l~~l~~L~~L~L~~n~l~~ 163 (526)
-+..++.++||+|.|... +...+.+-.+|+..+++.- ++|. +| +.+-+||+|+..+||.|.|..
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~-ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~ 106 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDA-FTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGS 106 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhh-hhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCc
Confidence 356777777777777543 3334555667777777653 2222 22 234567777777777777765
Q ss_pred CCccc----cCCCCCCCEEEccCCcCCccCCcccc------cCcccccCCCCCCEEEccCCcCCCcCch----hhcCcCc
Q 009771 164 TIPIE----IGSVRNLETLSLDGNKLSGVLPIYFG------TIPIEIESLRNLQWLDLSSNKLSGTIPK----EIGSLRN 229 (526)
Q Consensus 164 ~~p~~----l~~l~~L~~L~L~~n~l~~~~p~~~~------~ip~~l~~l~~L~~L~l~~n~l~~~~p~----~l~~l~~ 229 (526)
..|.. +..-+.|.+|.+++|.+...--..++ ..-.-..+-+.|+.+.+..|++..-... .+..-.+
T Consensus 107 ~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~ 186 (388)
T COG5238 107 EFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHEN 186 (388)
T ss_pred ccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcC
Confidence 55543 34456677777777654311111110 0000123445666666666665421111 1111135
Q ss_pred cCcccccccccCCCC-----chhhhcCcCCCeeecccccCCCC----CCccccCCCccceeecccccCC
Q 009771 230 LKELDLSSNKLGGVL-----PQEIENLKSLTALSMDANNLGGP----IPSTLFRLTNIEYLSLGFNRFN 289 (526)
Q Consensus 230 L~~L~l~~n~l~~~~-----p~~l~~l~~L~~L~l~~n~l~~~----~p~~l~~~~~L~~L~L~~n~l~ 289 (526)
|+++.+..|.+.-.- -..+..+.+|+.|++..|.++-. +...+...+.|+.|.+.+|-++
T Consensus 187 lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls 255 (388)
T COG5238 187 LKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLS 255 (388)
T ss_pred ceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhc
Confidence 555555555443110 01123345555555555554421 1122333444555555555544
No 61
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.16 E-value=2.5e-07 Score=89.62 Aligned_cols=85 Identities=25% Similarity=0.314 Sum_probs=56.4
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||+......+.++|||||||++.|++| |+.|..... +. .+.+.+.....+. .......++.++..
T Consensus 192 y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~-------~~-~~~~~i~~~~~~~---~~~~~~~~~~~l~~ 260 (283)
T cd05048 192 WMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS-------NQ-EVIEMIRSRQLLP---CPEDCPARVYALMI 260 (283)
T ss_pred ccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC-------HH-HHHHHHHcCCcCC---CcccCCHHHHHHHH
Confidence 345787766778899999999999999998 998843211 00 1111121111111 11223455778889
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|.+||+|+||.
T Consensus 261 ~c~~~~p~~Rp~~~~i~ 277 (283)
T cd05048 261 ECWNEIPARRPRFKDIH 277 (283)
T ss_pred HHccCChhhCcCHHHHH
Confidence 99999999999999873
No 62
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.16 E-value=4.2e-07 Score=87.94 Aligned_cols=92 Identities=20% Similarity=0.306 Sum_probs=57.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCcccc-ccccccCCC---cc---ccccccCCCCCCcccchHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLS-SLSSSSGPK---IM---LINVLDQRLSPPVNQKIVQDIILV 504 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~-~~~~~~~~~---~~---~~~~~d~~l~~~~~~~~~~~~~~~ 504 (526)
..||+......+.++|+||||++++|++||+.|..... .......+. .. +.+.+......+ ....+..++
T Consensus 179 ~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 255 (284)
T cd05038 179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLP---RPPSCPDEV 255 (284)
T ss_pred cCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCC---CCccCCHHH
Confidence 45777766778899999999999999999999854211 110000000 00 111122211111 111223567
Q ss_pred HHHHHhcCCCCCCCCCCccccC
Q 009771 505 STIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 505 ~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.+++..|++.+|++||+|.||+
T Consensus 256 ~~li~~cl~~~p~~Rpt~~ei~ 277 (284)
T cd05038 256 YDLMKLCWEAEPQDRPSFADLI 277 (284)
T ss_pred HHHHHHHhccChhhCCCHHHHH
Confidence 7899999999999999999874
No 63
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=98.14 E-value=3.7e-07 Score=88.92 Aligned_cols=84 Identities=24% Similarity=0.333 Sum_probs=54.8
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|+++ |..|..... .....+.+....... ........+.++...
T Consensus 201 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~ 269 (293)
T cd05053 201 MAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP--------VEELFKLLKEGYRME---KPQNCTQELYHLMRD 269 (293)
T ss_pred cCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC--------HHHHHHHHHcCCcCC---CCCCCCHHHHHHHHH
Confidence 45777766778899999999999999997 888743210 000111111111111 111223457789999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||+|.||+
T Consensus 270 ~l~~~p~~Rps~~eil 285 (293)
T cd05053 270 CWHEVPSQRPTFKQLV 285 (293)
T ss_pred HcccCcccCcCHHHHH
Confidence 9999999999999874
No 64
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.12 E-value=5.4e-07 Score=85.70 Aligned_cols=84 Identities=23% Similarity=0.390 Sum_probs=55.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+||||++++|++||+.|...... ......+......+ . .......+.++...|
T Consensus 168 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~-~---~~~~~~~~~~~i~~~ 236 (256)
T cd08529 168 LSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-------GALILKIIRGVFPP-V---SQMYSQQLAQLIDQC 236 (256)
T ss_pred cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCCC-C---ccccCHHHHHHHHHH
Confidence 467877777788999999999999999999999532110 00011111111111 0 011234567788899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.|++
T Consensus 237 l~~~p~~Rp~~~~ll 251 (256)
T cd08529 237 LTKDYRQRPDTFQLL 251 (256)
T ss_pred ccCCcccCcCHHHHh
Confidence 999999999999874
No 65
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.12 E-value=4.3e-07 Score=87.28 Aligned_cols=84 Identities=21% Similarity=0.328 Sum_probs=54.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......++++||||||++++|+++ |+.|...... ......+.+.... ........++.++...
T Consensus 182 ~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~----~~~~~~~~~~~~li~~ 250 (273)
T cd05035 182 IAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-------HEIYDYLRHGNRL----KQPEDCLDELYDLMYS 250 (273)
T ss_pred cCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCCC----CCCcCCCHHHHHHHHH
Confidence 45777666678899999999999999999 7777432110 0001111111111 0111233456788889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 251 ~l~~~p~~Rp~~~e~~ 266 (273)
T cd05035 251 CWRADPKDRPTFTKLR 266 (273)
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999999873
No 66
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.12 E-value=3.9e-07 Score=86.83 Aligned_cols=83 Identities=25% Similarity=0.440 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccC-CCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQ-RLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|+||||++++|++| |+.|....... + ....+... +...+ . .....+.+++.
T Consensus 168 ~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~------~-~~~~i~~~~~~~~~--~---~~~~~~~~li~ 235 (256)
T cd05114 168 SPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY------E-VVEMISRGFRLYRP--K---LASMTVYEVMY 235 (256)
T ss_pred CChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH------H-HHHHHHCCCCCCCC--C---CCCHHHHHHHH
Confidence 34777666677889999999999999999 88884321100 0 01111111 11111 1 11235678999
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.|++
T Consensus 236 ~c~~~~p~~Rps~~~l~ 252 (256)
T cd05114 236 SCWHEKPEGRPTFAELL 252 (256)
T ss_pred HHccCCcccCcCHHHHH
Confidence 99999999999999874
No 67
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.11 E-value=3.8e-07 Score=88.78 Aligned_cols=84 Identities=24% Similarity=0.315 Sum_probs=54.9
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|++| |+.|....... ..+..+....... ....+...+.++...
T Consensus 192 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~----~~~~~~~~~~~li~~ 260 (291)
T cd05094 192 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT-------EVIECITQGRVLE----RPRVCPKEVYDIMLG 260 (291)
T ss_pred cChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHhCCCCCC----CCccCCHHHHHHHHH
Confidence 45777776778889999999999999999 99884321110 0011111111110 001123456789999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.+|+
T Consensus 261 ~l~~~P~~Rpt~~~v~ 276 (291)
T cd05094 261 CWQREPQQRLNIKEIY 276 (291)
T ss_pred HcccChhhCcCHHHHH
Confidence 9999999999999873
No 68
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.11 E-value=3.9e-07 Score=87.08 Aligned_cols=84 Identities=23% Similarity=0.307 Sum_probs=52.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCC-CccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHP-GELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|++||+.| ....... + ....+....- ... .......+.++...
T Consensus 169 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~------~-~~~~~~~~~~-~~~---~~~~~~~~~~li~~ 237 (262)
T cd05058 169 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF------D-ITVYLLQGRR-LLQ---PEYCPDPLYEVMLS 237 (262)
T ss_pred cChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH------H-HHHHHhcCCC-CCC---CCcCCHHHHHHHHH
Confidence 457777667788999999999999999997665 2211000 0 0011111110 000 01112356688999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 238 cl~~~p~~Rp~~~~il 253 (262)
T cd05058 238 CWHPKPEMRPTFSELV 253 (262)
T ss_pred HcCCChhhCCCHHHHH
Confidence 9999999999999873
No 69
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.11 E-value=3.4e-06 Score=55.65 Aligned_cols=37 Identities=32% Similarity=0.626 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHHhccC-----CCCCCCCCCCCCCCCCcccceeeC
Q 009771 34 SIHVAASEIERQALLN-----SGWWKDRIPQNTSDHCGWVGITCD 73 (526)
Q Consensus 34 ~~~~~~l~~~~~~~~~-----~~~w~~~~~~~~~~~C~w~gv~C~ 73 (526)
..|++||+.||+++.. +.+|... ...+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~---~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPS---SDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT-----S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCc---CCCCCeeeccEEeC
Confidence 4688999999999973 6889761 02799999999995
No 70
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=98.10 E-value=5.8e-07 Score=89.69 Aligned_cols=84 Identities=27% Similarity=0.369 Sum_probs=55.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......++|.|||||||||+||+||..|+-++.+-+-.-... .+.+. + .....|..-..-+--.|
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG---sNsL~--L-----pvPstcP~GfklL~Kqc 347 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG---SNSLH--L-----PVPSTCPDGFKLLLKQC 347 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc---CCccc--c-----cCcccCchHHHHHHHHH
Confidence 45888888889999999999999999999999965543221000000 01111 1 11223333333456689
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.-|..||+++++
T Consensus 348 w~sKpRNRPSFrqi 361 (904)
T KOG4721|consen 348 WNSKPRNRPSFRQI 361 (904)
T ss_pred HhcCCCCCccHHHH
Confidence 99999999999875
No 71
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.10 E-value=3.7e-07 Score=87.21 Aligned_cols=83 Identities=25% Similarity=0.353 Sum_probs=54.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++||||||++++|++| |+.|....... .....++.....+ ........+.+++..
T Consensus 171 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~li~~ 239 (261)
T cd05068 171 TAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--------EVLQQVDQGYRMP---CPPGCPKELYDIMLD 239 (261)
T ss_pred cCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCC---CCCcCCHHHHHHHHH
Confidence 35777766778899999999999999999 88875321110 0111111111110 011223456788999
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||+|.++
T Consensus 240 ~l~~~P~~Rp~~~~l 254 (261)
T cd05068 240 CWKEDPDDRPTFETL 254 (261)
T ss_pred HhhcCcccCCCHHHH
Confidence 999999999999886
No 72
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.10 E-value=4.2e-07 Score=86.97 Aligned_cols=85 Identities=21% Similarity=0.239 Sum_probs=54.7
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..+||+......+.++|||||||+++|++| |+.|...... . ...+.+........... ...++.++..
T Consensus 171 y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~~---~~~~~~~li~ 239 (263)
T cd05052 171 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-------S-QVYELLEKGYRMERPEG---CPPKVYELMR 239 (263)
T ss_pred cCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------H-HHHHHHHCCCCCCCCCC---CCHHHHHHHH
Confidence 346887777778899999999999999998 8888432100 0 01111111111111011 1244667888
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.|++
T Consensus 240 ~cl~~~p~~Rp~~~~l~ 256 (263)
T cd05052 240 ACWQWNPSDRPSFAEIH 256 (263)
T ss_pred HHccCCcccCCCHHHHH
Confidence 99999999999999873
No 73
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.10 E-value=1.4e-06 Score=87.96 Aligned_cols=84 Identities=27% Similarity=0.449 Sum_probs=56.2
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCcccccccc--CCCCCCcccchHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLD--QRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~l 507 (526)
.+.||...+...++|+|||||||++.|+++ |..|....... .....|+- -+...+ .....++. .+
T Consensus 328 WLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-------~v~~kI~~~~~r~~~~--~~~p~~~~---~~ 395 (474)
T KOG0194|consen 328 WLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-------EVKAKIVKNGYRMPIP--SKTPKELA---KV 395 (474)
T ss_pred ecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-------HHHHHHHhcCccCCCC--CCCHHHHH---HH
Confidence 356999998999999999999999999998 88885532211 01111211 122111 22334444 44
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
.-.|...+|++||+|.+|+
T Consensus 396 ~~~c~~~~p~~R~tm~~i~ 414 (474)
T KOG0194|consen 396 MKQCWKKDPEDRPTMSTIK 414 (474)
T ss_pred HHHhccCChhhccCHHHHH
Confidence 4599999999999999873
No 74
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.10 E-value=6e-07 Score=87.02 Aligned_cols=95 Identities=21% Similarity=0.310 Sum_probs=55.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCccc-chHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQ-KIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~-~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|+|||||+++|++||+.|......-.........+.+.+...+...... ...+....+.++...
T Consensus 169 ~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 248 (284)
T cd06620 169 MSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDA 248 (284)
T ss_pred CCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHH
Confidence 4577766667888999999999999999999995432110000000000111111111000000 011123456678889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 249 ~l~~dp~~Rpt~~e~~ 264 (284)
T cd06620 249 CLLKDPTERPTPQQLC 264 (284)
T ss_pred HhcCCcccCcCHHHHh
Confidence 9999999999999874
No 75
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.08 E-value=8.7e-07 Score=85.50 Aligned_cols=84 Identities=21% Similarity=0.385 Sum_probs=55.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|||||||+++|++||+.|........ ....+.....+.. .......+.++...|
T Consensus 168 ~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~li~~~ 236 (277)
T cd06642 168 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--------VLFLIPKNSPPTL---EGQYSKPFKEFVEAC 236 (277)
T ss_pred cCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--------HHhhhhcCCCCCC---CcccCHHHHHHHHHH
Confidence 45787777778889999999999999999999954221110 0001111111100 011234466778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 237 l~~~p~~Rp~~~~il 251 (277)
T cd06642 237 LNKDPRFRPTAKELL 251 (277)
T ss_pred ccCCcccCcCHHHHH
Confidence 999999999999874
No 76
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.07 E-value=9.5e-07 Score=84.00 Aligned_cols=86 Identities=20% Similarity=0.311 Sum_probs=53.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
+.||+......+.++|||||||+++|++||+.|........ ... .......+... .....-..+.++...|
T Consensus 166 ~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~-~~~---~~~~~~~~~~~-----~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 166 MAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR-AIF---MIPNKPPPTLS-----DPEKWSPEFNDFVKKC 236 (256)
T ss_pred cCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh-hhh---hhccCCCCCCC-----chhhcCHHHHHHHHHH
Confidence 45787777788899999999999999999999954211100 000 00000001110 1111112355677799
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 237 l~~~P~~Rps~~~il 251 (256)
T cd06612 237 LVKDPEERPSAIQLL 251 (256)
T ss_pred HhcChhhCcCHHHHh
Confidence 999999999999874
No 77
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.07 E-value=4.8e-07 Score=86.83 Aligned_cols=84 Identities=20% Similarity=0.318 Sum_probs=54.8
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|++| |+.|...... . .....+......+ ...+....+.+++..
T Consensus 177 ~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-------~-~~~~~i~~~~~~~---~~~~~~~~~~~li~~ 245 (268)
T cd05063 177 TAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-------H-EVMKAINDGFRLP---APMDCPSAVYQLMLQ 245 (268)
T ss_pred cCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-------H-HHHHHHhcCCCCC---CCCCCCHHHHHHHHH
Confidence 35676666677899999999999999997 9999532110 0 0111111111111 111233457789999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 246 c~~~~p~~Rp~~~~i~ 261 (268)
T cd05063 246 CWQQDRARRPRFVDIV 261 (268)
T ss_pred HcCCCcccCcCHHHHH
Confidence 9999999999999873
No 78
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=98.07 E-value=4.6e-07 Score=87.47 Aligned_cols=84 Identities=23% Similarity=0.220 Sum_probs=55.0
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......++++|||||||+++|++| |+.|...... ....+.+........ .......+.++...
T Consensus 188 ~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~ 256 (277)
T cd05036 188 MPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--------QEVMEFVTGGGRLDP---PKGCPGPVYRIMTD 256 (277)
T ss_pred CCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHcCCcCCC---CCCCCHHHHHHHHH
Confidence 55888777788999999999999999997 8887432110 001111111111100 01122456788899
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 257 cl~~~p~~Rps~~~vl 272 (277)
T cd05036 257 CWQHTPEDRPNFATIL 272 (277)
T ss_pred HcCCCcccCcCHHHHH
Confidence 9999999999999874
No 79
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=98.07 E-value=5e-07 Score=85.66 Aligned_cols=85 Identities=14% Similarity=0.185 Sum_probs=55.4
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||+......+.++|+||||++++|+++ |+.|....... .....+........ .......+.++..
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~li~ 228 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEKGYRMSC---PQKCPDDVYKVMQ 228 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCCCCCC---CCCCCHHHHHHHH
Confidence 456888777788999999999999999998 88884321100 00000111100000 0112345778899
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 229 ~~l~~~p~~Rp~~~~l~ 245 (250)
T cd05085 229 RCWDYKPENRPKFSELQ 245 (250)
T ss_pred HHcccCcccCCCHHHHH
Confidence 99999999999999873
No 80
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.07 E-value=5e-07 Score=87.50 Aligned_cols=84 Identities=20% Similarity=0.290 Sum_probs=54.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |..|..... .......+.+....+. ..++...+..+...
T Consensus 193 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-------~~~~~~~i~~~~~~~~----~~~~~~~~~~li~~ 261 (283)
T cd05091 193 MSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-------NQDVIEMIRNRQVLPC----PDDCPAWVYTLMLE 261 (283)
T ss_pred cCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHHHHcCCcCCC----CCCCCHHHHHHHHH
Confidence 45777766678889999999999999998 776633210 0001111222211111 11223446688999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 262 cl~~~p~~RP~~~~i~ 277 (283)
T cd05091 262 CWNEFPSRRPRFKDIH 277 (283)
T ss_pred HhCCCcccCCCHHHHH
Confidence 9999999999999873
No 81
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.05 E-value=6.6e-07 Score=89.15 Aligned_cols=85 Identities=25% Similarity=0.344 Sum_probs=54.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|...... .......+.+....+.. . .....+.++...
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~-~---~~~~~l~~li~~ 312 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI------NEEFCQRLKDGTRMRAP-E---NATPEIYRIMLA 312 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc------cHHHHHHHhcCCCCCCC-C---CCCHHHHHHHHH
Confidence 45777766678899999999999999997 9988542110 00000111111111000 1 112346688999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 313 cl~~dp~~RPs~~el~ 328 (338)
T cd05102 313 CWQGDPKERPTFSALV 328 (338)
T ss_pred HccCChhhCcCHHHHH
Confidence 9999999999999874
No 82
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.04 E-value=9.3e-07 Score=84.86 Aligned_cols=85 Identities=16% Similarity=0.262 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|+++|+.|..... ... ....+.+....+...... ..++.++...|
T Consensus 180 ~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~------~~~-~~~~~~~~~~~~~~~~~~---~~~l~~li~~c 249 (269)
T cd08528 180 SCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN------MLS-LATKIVEAVYEPLPEGMY---SEDVTDVITSC 249 (269)
T ss_pred cChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC------HHH-HHHHHhhccCCcCCcccC---CHHHHHHHHHH
Confidence 45777776678899999999999999999999843110 000 011111111111110111 23455677799
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 250 l~~~p~~Rp~~~e~~ 264 (269)
T cd08528 250 LTPDAEARPDIIQVS 264 (269)
T ss_pred CCCCCccCCCHHHHH
Confidence 999999999999873
No 83
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.04 E-value=8.6e-07 Score=88.26 Aligned_cols=86 Identities=22% Similarity=0.278 Sum_probs=56.0
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||+......+.|+|||||||+++|++| |+.|....... ......+........ ......++.+++.
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~~l~~ 310 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID-------EEFCRRLKEGTRMRA---PEYATPEIYSIML 310 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc-------HHHHHHHhccCCCCC---CccCCHHHHHHHH
Confidence 356887777788999999999999999998 98885321110 001111111111000 0112345678899
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.||+
T Consensus 311 ~cl~~~p~~RPs~~ell 327 (337)
T cd05054 311 DCWHNNPEDRPTFSELV 327 (337)
T ss_pred HHccCChhhCcCHHHHH
Confidence 99999999999999874
No 84
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.02 E-value=7.4e-07 Score=86.65 Aligned_cols=84 Identities=25% Similarity=0.370 Sum_probs=54.8
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|..... ...+.+.++......... .....+.+++..
T Consensus 196 ~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~ 264 (290)
T cd05045 196 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--------PERLFNLLKTGYRMERPE---NCSEEMYNLMLT 264 (290)
T ss_pred cCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHhCCCCCCCCC---CCCHHHHHHHHH
Confidence 45777666678899999999999999999 888743210 001112222222111101 112346678899
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 265 cl~~~P~~Rp~~~~i~ 280 (290)
T cd05045 265 CWKQEPDKRPTFADIS 280 (290)
T ss_pred HccCCcccCCCHHHHH
Confidence 9999999999999874
No 85
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=98.01 E-value=1.3e-06 Score=83.72 Aligned_cols=87 Identities=17% Similarity=0.208 Sum_probs=53.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||||++++|++||+.|..... .......+.+.....++. ........+.++...|
T Consensus 173 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~c 244 (267)
T cd08228 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLFSLCQKIEQCDYPPL--PTEHYSEKLRELVSMC 244 (267)
T ss_pred cChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc------ccHHHHHHHHhcCCCCCC--ChhhcCHHHHHHHHHH
Confidence 35776666667889999999999999999999942110 000011111111111110 0111224456777899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.||+
T Consensus 245 l~~~p~~Rp~~~~vl 259 (267)
T cd08228 245 IYPDPDQRPDIGYVH 259 (267)
T ss_pred CCCCcccCcCHHHHH
Confidence 999999999999873
No 86
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=98.01 E-value=8.9e-07 Score=84.56 Aligned_cols=84 Identities=23% Similarity=0.296 Sum_probs=53.4
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||+......+.++|+|||||+++|++| |+.|...... . .....+......+... ....++.++..
T Consensus 170 y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~---~~~~~~~~li~ 238 (261)
T cd05072 170 WTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN-------S-DVMSALQRGYRMPRME---NCPDELYDIMK 238 (261)
T ss_pred cCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH-------H-HHHHHHHcCCCCCCCC---CCCHHHHHHHH
Confidence 345777766677889999999999999998 8888432100 0 0001111111111101 11234667899
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|+..+|++||+|.++
T Consensus 239 ~~l~~~p~~Rp~~~~i 254 (261)
T cd05072 239 TCWKEKAEERPTFDYL 254 (261)
T ss_pred HHccCCcccCcCHHHH
Confidence 9999999999999886
No 87
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.01 E-value=2e-06 Score=83.02 Aligned_cols=84 Identities=19% Similarity=0.336 Sum_probs=55.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|||||||+++|++||+.|...... .. ....+.....+ .........+.++...|
T Consensus 168 ~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-------~~-~~~~~~~~~~~---~~~~~~~~~~~~li~~~ 236 (277)
T cd06640 168 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP-------MR-VLFLIPKNNPP---TLTGEFSKPFKEFIDAC 236 (277)
T ss_pred cCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcCh-------Hh-HhhhhhcCCCC---CCchhhhHHHHHHHHHH
Confidence 457777666788999999999999999999998532110 00 00111111111 11123345677888999
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 237 l~~~p~~Rp~~~~il 251 (277)
T cd06640 237 LNKDPSFRPTAKELL 251 (277)
T ss_pred cccCcccCcCHHHHH
Confidence 999999999999874
No 88
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.01 E-value=4.2e-07 Score=86.80 Aligned_cols=82 Identities=21% Similarity=0.329 Sum_probs=58.1
Q ss_pred Cchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCcccccccc-CCCCCCcccchHHHHHHHHHHHHh
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLD-QRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
++|-......++.+|||||||+++|+.| |+.|.-.+..+.-..+ +.| .|+. ++..|..+++.|...
T Consensus 466 slEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y-------lkdGyRla-----QP~NCPDeLf~vMac 533 (563)
T KOG1024|consen 466 SLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY-------LKDGYRLA-----QPFNCPDELFTVMAC 533 (563)
T ss_pred CHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH-------Hhccceec-----CCCCCcHHHHHHHHH
Confidence 4566666678999999999999999985 8888543322211111 111 2443 234577788999999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++..|++||+.++++
T Consensus 534 CWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 534 CWALLPEERPSFSQLV 549 (563)
T ss_pred HHhcCcccCCCHHHHH
Confidence 9999999999998864
No 89
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.00 E-value=1.2e-06 Score=83.89 Aligned_cols=84 Identities=17% Similarity=0.325 Sum_probs=51.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
+.||+......+.++|||||||+++|++||+.|........ .+.........+.. ...+...++..+.|
T Consensus 176 ~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~-------~~~~~~~~~~~~~~----~~~~~~~~~~li~~ 244 (266)
T cd06651 176 MSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA-------AIFKIATQPTNPQL----PSHISEHARDFLGC 244 (266)
T ss_pred cCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH-------HHHHHhcCCCCCCC----chhcCHHHHHHHHH
Confidence 46787776777889999999999999999999954221110 01111000001100 11122222334468
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||+|.||+
T Consensus 245 ~~~~p~~Rp~~~eil 259 (266)
T cd06651 245 IFVEARHRPSAEELL 259 (266)
T ss_pred hcCChhhCcCHHHHh
Confidence 889999999999874
No 90
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.00 E-value=1.6e-06 Score=83.42 Aligned_cols=85 Identities=21% Similarity=0.394 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|||||||+++|++||+.|..... +.. ....+.....+..... ..-..+.++...|
T Consensus 165 ~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~-------~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~ 234 (274)
T cd06609 165 MAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH-------PMR-VLFLIPKNNPPSLEGN--KFSKPFKDFVSLC 234 (274)
T ss_pred cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc-------hHH-HHHHhhhcCCCCCccc--ccCHHHHHHHHHH
Confidence 45787777778999999999999999999999954211 000 0000111111100000 0112345677889
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||+|++|+
T Consensus 235 l~~~p~~Rpt~~~il 249 (274)
T cd06609 235 LNKDPKERPSAKELL 249 (274)
T ss_pred hhCChhhCcCHHHHh
Confidence 999999999999874
No 91
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.99 E-value=9.8e-07 Score=84.57 Aligned_cols=84 Identities=24% Similarity=0.345 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++||||||++++|+++ |+.|...... . + ....+.+....+. ...+...+.++...
T Consensus 175 ~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~---~---~-~~~~~~~~~~~~~----~~~~~~~l~~li~~ 243 (266)
T cd05033 175 TAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN---Q---D-VIKAVEDGYRLPP----PMDCPSALYQLMLD 243 (266)
T ss_pred cChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH---H---H-HHHHHHcCCCCCC----CCCCCHHHHHHHHH
Confidence 45676666677889999999999999998 9888532110 0 0 0111111111110 11123456788999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 244 cl~~~p~~Rp~~~ei~ 259 (266)
T cd05033 244 CWQKDRNERPTFSQIV 259 (266)
T ss_pred HcCCCcccCcCHHHHH
Confidence 9999999999999873
No 92
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.99 E-value=1.8e-06 Score=82.67 Aligned_cols=86 Identities=16% Similarity=0.139 Sum_probs=52.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+||||++++|+++|+.|......-. ....+ .+.....+...+ . ..-..+.++...|
T Consensus 173 ~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~-~~~~~~~~~~~~---~---~~~~~~~~li~~~ 244 (267)
T cd08229 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCK-KIEQCDYPPLPS---D---HYSEELRQLVNMC 244 (267)
T ss_pred cCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH-HHHhh-hhhcCCCCCCCc---c---cccHHHHHHHHHh
Confidence 45777766677889999999999999999999943110000 00000 011111111110 1 1123455677799
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
+..+|++||+|.+|
T Consensus 245 l~~~p~~Rpt~~~i 258 (267)
T cd08229 245 INPDPEKRPDITYV 258 (267)
T ss_pred cCCCcccCCCHHHH
Confidence 99999999999976
No 93
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.99 E-value=9e-07 Score=85.97 Aligned_cols=83 Identities=23% Similarity=0.316 Sum_probs=53.9
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|+|||||++.|++| |+.|...... ......+......... . .....+.++...
T Consensus 189 ~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~-------~~~~~~i~~~~~~~~~-~---~~~~~l~~li~~ 257 (288)
T cd05093 189 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------NEVIECITQGRVLQRP-R---TCPKEVYDLMLG 257 (288)
T ss_pred cCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCcCCCC-C---CCCHHHHHHHHH
Confidence 45777776778899999999999999998 8887432110 0001111111110000 1 112347789999
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|.+||+|.||
T Consensus 258 ~l~~~p~~Rpt~~~v 272 (288)
T cd05093 258 CWQREPHMRLNIKEI 272 (288)
T ss_pred HccCChhhCCCHHHH
Confidence 999999999999987
No 94
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=97.97 E-value=1e-06 Score=85.26 Aligned_cols=84 Identities=19% Similarity=0.243 Sum_probs=54.0
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|++| |+.|....... ...+++........ . ..+...+.++...
T Consensus 178 ~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~-~--~~~~~~~~~li~~ 246 (279)
T cd05111 178 MALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--------EVPDLLEKGERLAQ-P--QICTIDVYMVMVK 246 (279)
T ss_pred cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCCcCCC-C--CCCCHHHHHHHHH
Confidence 45777766778899999999999999998 98885422110 01112111111000 0 0122345667889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||+|.|++
T Consensus 247 c~~~~p~~Rps~~el~ 262 (279)
T cd05111 247 CWMIDENVRPTFKELA 262 (279)
T ss_pred HcCCCcccCcCHHHHH
Confidence 9999999999999863
No 95
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.97 E-value=1.9e-06 Score=83.23 Aligned_cols=92 Identities=20% Similarity=0.272 Sum_probs=54.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++||||||++++|++||+.|............+......+.++.-........ -.++.++...|
T Consensus 160 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~ 236 (279)
T cd06619 160 MAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQF---SEKFVHFITQC 236 (279)
T ss_pred cCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcC---CHHHHHHHHHH
Confidence 356766666678899999999999999999999543221111101100011111111100000111 12355777789
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 237 l~~~P~~Rp~~~eil 251 (279)
T cd06619 237 MRKQPKERPAPENLM 251 (279)
T ss_pred hhCChhhCCCHHHHh
Confidence 999999999999874
No 96
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.97 E-value=4.7e-07 Score=74.00 Aligned_cols=104 Identities=30% Similarity=0.428 Sum_probs=63.7
Q ss_pred CCEEeCCCCCCCCCCch---hccCCCCCCEEEccCccCCccCCcccC-CCCCCCEEEccCCCCCCCCccccCCCCCCCEE
Q 009771 103 LQYLDLGSNNLSGSIPS---QIDSLSNLTYIYLYENNLTGTIPKEIG-SLRNLEVLDLGSNNLNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 103 L~~L~l~~n~~~~~~p~---~l~~l~~L~~L~Ls~n~~~~~ip~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 178 (526)
+..++|+++.+- .+++ .+....+|+..+|++|.|. ..|+.|. ..+.++.|+|++|.++ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 445666666553 2333 3445566677778888776 4455443 4557777777777776 567667777777777
Q ss_pred EccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCC
Q 009771 179 SLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLS 217 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~ 217 (526)
+++.|.+.. .|.-+..+.+|..|+..+|.+.
T Consensus 106 Nl~~N~l~~--------~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLNA--------EPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCcccc--------chHHHHHHHhHHHhcCCCCccc
Confidence 777776652 2333344556666666666554
No 97
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.97 E-value=9.9e-07 Score=84.79 Aligned_cols=85 Identities=24% Similarity=0.255 Sum_probs=54.6
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||+......+.++|||||||+++|++| |+.|..... ..+ ..+.+......+. .......+.++..
T Consensus 177 y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~------~~~--~~~~~~~~~~~~~---~~~~~~~~~~li~ 245 (270)
T cd05047 177 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAE--LYEKLPQGYRLEK---PLNCDDEVYDLMR 245 (270)
T ss_pred cCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC------HHH--HHHHHhCCCCCCC---CCcCCHHHHHHHH
Confidence 345777766778889999999999999997 888843210 000 1111111111000 0111234678999
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|+..+|.+||+|.||+
T Consensus 246 ~~l~~~p~~Rps~~~il 262 (270)
T cd05047 246 QCWREKPYERPSFAQIL 262 (270)
T ss_pred HHcccChhhCCCHHHHH
Confidence 99999999999999874
No 98
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.95 E-value=1.1e-06 Score=83.83 Aligned_cols=84 Identities=23% Similarity=0.337 Sum_probs=53.6
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|...... ....+.+.......... .....+.++...
T Consensus 168 ~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~---~~~~~~~~li~~ 236 (256)
T cd05113 168 SPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--------SETVEKVSQGLRLYRPH---LASEKVYAIMYS 236 (256)
T ss_pred CCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHHhcCCCCCCCC---CCCHHHHHHHHH
Confidence 35777766678889999999999999998 8888432110 00101111111000001 113456778889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.+++
T Consensus 237 cl~~~p~~Rp~~~~ll 252 (256)
T cd05113 237 CWHEKAEERPTFQQLL 252 (256)
T ss_pred HcCCCcccCCCHHHHH
Confidence 9999999999998874
No 99
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.95 E-value=1.6e-06 Score=82.55 Aligned_cols=85 Identities=18% Similarity=0.298 Sum_probs=54.9
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
...||.......+.++||||||++++|+++|+.|...... ......+....+.. . . ...-..+.++...
T Consensus 168 y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-------~~~~~~~~~~~~~~-~-~--~~~~~~~~~li~~ 236 (257)
T cd08223 168 YMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-------NSLVYRIIEGKLPP-M-P--KDYSPELGELIAT 236 (257)
T ss_pred ccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhcCCCC-C-c--cccCHHHHHHHHH
Confidence 3567777777788899999999999999999998532100 00000111111111 1 0 1112346688999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.|++
T Consensus 237 ~l~~~p~~Rp~~~~~l 252 (257)
T cd08223 237 MLSKRPEKRPSVKSIL 252 (257)
T ss_pred HhccCcccCCCHHHHh
Confidence 9999999999999874
No 100
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.94 E-value=9.8e-07 Score=85.46 Aligned_cols=92 Identities=20% Similarity=0.252 Sum_probs=55.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccc-cccccCCCc-------cccccccCCCCCCcccchHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSS-LSSSSGPKI-------MLINVLDQRLSPPVNQKIVQDIIL 503 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~-~~~~~~~~~-------~~~~~~d~~l~~~~~~~~~~~~~~ 503 (526)
..||+......+.++|+|||||+++|+++|+.|...... +........ .+.+++......+. .......
T Consensus 178 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 254 (284)
T cd05081 178 YAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPA---PPGCPAE 254 (284)
T ss_pred eCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCC---CCCCCHH
Confidence 457776666778899999999999999999877432211 111101100 01111111111110 1112345
Q ss_pred HHHHHHhcCCCCCCCCCCccccC
Q 009771 504 VSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 504 ~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
+.++...|++.+|++||+|.||+
T Consensus 255 ~~~li~~cl~~~p~~Rpt~~ei~ 277 (284)
T cd05081 255 IYAIMKECWNNDPSQRPSFSELA 277 (284)
T ss_pred HHHHHHHHccCChhhCCCHHHHH
Confidence 77889999999999999999874
No 101
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.94 E-value=1.3e-06 Score=84.49 Aligned_cols=83 Identities=25% Similarity=0.287 Sum_probs=53.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|++| |+.|....... ...+.+........ .......+.++...
T Consensus 191 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 259 (280)
T cd05092 191 MPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--------EAIECITQGRELER---PRTCPPEVYAIMQG 259 (280)
T ss_pred cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--------HHHHHHHcCccCCC---CCCCCHHHHHHHHH
Confidence 45777766778899999999999999998 88874321110 01111111111000 01112345678899
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|.+||++.||
T Consensus 260 cl~~~P~~Rp~~~~l 274 (280)
T cd05092 260 CWQREPQQRMVIKDI 274 (280)
T ss_pred HccCChhhCCCHHHH
Confidence 999999999999987
No 102
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.94 E-value=3e-06 Score=80.85 Aligned_cols=88 Identities=22% Similarity=0.356 Sum_probs=53.7
Q ss_pred CCchhcccc---cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTM---VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~---~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||..... ..+.++|+||||+++.|++||+.|....... .....+......+............+.++.
T Consensus 168 ~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 240 (262)
T cd06613 168 MAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM-------RALFLISKSNFPPPKLKDKEKWSPVFHDFI 240 (262)
T ss_pred cCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhccCCCccccchhhhhHHHHHHH
Confidence 446665544 6788999999999999999999995422110 000000000001000011111234466889
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|+..+|.+||++.||+
T Consensus 241 ~~~l~~~p~~Rpt~~~il 258 (262)
T cd06613 241 KKCLTKDPKKRPTATKLL 258 (262)
T ss_pred HHHcCCChhhCCCHHHHh
Confidence 999999999999999874
No 103
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.93 E-value=1.2e-06 Score=83.48 Aligned_cols=84 Identities=20% Similarity=0.324 Sum_probs=54.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|+|||||+++|++| |+.|...... . .....+...-.. ........++.++...
T Consensus 165 ~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~------~--~~~~~~~~~~~~---~~~~~~~~~l~~li~~ 233 (257)
T cd05060 165 YAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG------A--EVIAMLESGERL---PRPEECPQEIYSIMLS 233 (257)
T ss_pred cCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH------H--HHHHHHHcCCcC---CCCCCCCHHHHHHHHH
Confidence 45777776778889999999999999998 8988542111 0 011111111000 0011123456788999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||++.||+
T Consensus 234 cl~~~p~~Rp~~~~l~ 249 (257)
T cd05060 234 CWKYRPEDRPTFSELE 249 (257)
T ss_pred HhcCChhhCcCHHHHH
Confidence 9999999999999873
No 104
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.93 E-value=1.3e-06 Score=85.24 Aligned_cols=84 Identities=27% Similarity=0.283 Sum_probs=53.8
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||++.|++| |+.|..... +.. ..+.+.......... ..-..+.++...
T Consensus 185 ~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~-------~~~-~~~~~~~~~~~~~~~---~~~~~~~~li~~ 253 (297)
T cd05089 185 MAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT-------CAE-LYEKLPQGYRMEKPR---NCDDEVYELMRQ 253 (297)
T ss_pred cCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-------HHH-HHHHHhcCCCCCCCC---CCCHHHHHHHHH
Confidence 45777666677889999999999999998 888843211 000 111111111111101 112346678899
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||+|.+|+
T Consensus 254 ~l~~~p~~Rp~~~~i~ 269 (297)
T cd05089 254 CWRDRPYERPPFAQIS 269 (297)
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999999873
No 105
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.93 E-value=1.3e-06 Score=86.23 Aligned_cols=84 Identities=21% Similarity=0.323 Sum_probs=55.0
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|++| |+.|.+.... ..+..++......+. ...+...+.++...
T Consensus 178 ~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 246 (316)
T cd05108 178 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------SEISSILEKGERLPQ---PPICTIDVYMIMVK 246 (316)
T ss_pred cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHhCCCCCCC---CCCCCHHHHHHHHH
Confidence 45777666778899999999999999998 9988543110 001111111111111 01123456788999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|.+||+|.||+
T Consensus 247 cl~~~p~~Rps~~~l~ 262 (316)
T cd05108 247 CWMIDADSRPKFRELI 262 (316)
T ss_pred HccCChhhCcCHHHHH
Confidence 9999999999998863
No 106
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.93 E-value=1.8e-06 Score=82.21 Aligned_cols=83 Identities=23% Similarity=0.359 Sum_probs=55.1
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccc--cCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL--DQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~~la 508 (526)
+.||+......+.++|+||||++++|++| |+.|....... + ....+. ..... ........+.++.
T Consensus 167 ~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~-~~~~~~~~~~~~~-----~~~~~~~~~~~li 234 (257)
T cd05040 167 CAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS------Q-ILKKIDKEGERLE-----RPEACPQDIYNVM 234 (257)
T ss_pred cCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHhcCCcCC-----CCccCCHHHHHHH
Confidence 56788777788999999999999999999 99985321110 0 000000 01111 0111234566788
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||++.||+
T Consensus 235 ~~~l~~~p~~Rps~~~~~ 252 (257)
T cd05040 235 LQCWAHNPADRPTFAALR 252 (257)
T ss_pred HHHCCCCcccCCCHHHHH
Confidence 999999999999999874
No 107
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.93 E-value=1.9e-06 Score=82.28 Aligned_cols=84 Identities=15% Similarity=0.207 Sum_probs=54.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||||++++|+++|+.|...... . .+.+.+.....+.. .......+.++...|
T Consensus 177 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~ 245 (265)
T cd08217 177 MSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-------L-QLASKIKEGKFRRI---PYRYSSELNEVIKSM 245 (265)
T ss_pred cChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-------H-HHHHHHhcCCCCCC---ccccCHHHHHHHHHH
Confidence 456766666678899999999999999999999542110 0 01111111111111 112234566788899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 246 l~~~p~~Rp~~~~il 260 (265)
T cd08217 246 LNVDPDKRPSTEELL 260 (265)
T ss_pred ccCCcccCCCHHHHh
Confidence 999999999999874
No 108
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.93 E-value=1.5e-06 Score=83.28 Aligned_cols=83 Identities=22% Similarity=0.317 Sum_probs=53.9
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|+++ |+.|....... .....+.+. ...+. ...+...+.++...
T Consensus 175 ~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-------~~~~~~~~~-~~~~~---~~~~~~~~~~li~~ 243 (266)
T cd05064 175 AAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-------DVIKAVEDG-FRLPA---PRNCPNLLHQLMLD 243 (266)
T ss_pred cCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-------HHHHHHHCC-CCCCC---CCCCCHHHHHHHHH
Confidence 46787777788899999999999999775 99985432110 001111111 11010 11233456778899
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||+|.|+
T Consensus 244 c~~~~p~~RP~~~~i 258 (266)
T cd05064 244 CWQKERGERPRFSQI 258 (266)
T ss_pred HcCCCchhCCCHHHH
Confidence 999999999999876
No 109
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.92 E-value=1.5e-06 Score=83.97 Aligned_cols=84 Identities=26% Similarity=0.339 Sum_probs=54.8
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|+++ |+.|...... ......+......... . .....+.++...
T Consensus 191 ~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~-~---~~~~~~~~li~~ 259 (280)
T cd05049 191 MPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN-------EEVIECITQGRLLQRP-R---TCPSEVYDIMLG 259 (280)
T ss_pred cChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCcCCCC-C---CCCHHHHHHHHH
Confidence 56787777778899999999999999998 9988432110 0001111111111100 1 122456688999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 260 ~l~~~p~~Rp~~~eil 275 (280)
T cd05049 260 CWKRDPQQRINIKDIH 275 (280)
T ss_pred HcCCCcccCCCHHHHH
Confidence 9999999999999873
No 110
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.92 E-value=5.3e-07 Score=73.69 Aligned_cols=83 Identities=23% Similarity=0.313 Sum_probs=36.1
Q ss_pred CCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecC
Q 009771 301 NLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLS 380 (526)
Q Consensus 301 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 380 (526)
.|+..+|++|.+....+..-...+.++.|++++|.++ .+|..+..++.|+.|++++|.+. ..|..+..+.++..|+..
T Consensus 54 el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~ 131 (177)
T KOG4579|consen 54 ELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSP 131 (177)
T ss_pred eEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCC
Confidence 3444455555554322222222334444555555544 34444444555555555555444 223333334444444444
Q ss_pred CCcCc
Q 009771 381 SNLLS 385 (526)
Q Consensus 381 ~n~l~ 385 (526)
+|.+.
T Consensus 132 ~na~~ 136 (177)
T KOG4579|consen 132 ENARA 136 (177)
T ss_pred CCccc
Confidence 44443
No 111
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.91 E-value=2.5e-06 Score=81.57 Aligned_cols=90 Identities=17% Similarity=0.249 Sum_probs=54.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++||||||++++|+++|+.|......- ..........++..... .. .. ...-..+.++...|
T Consensus 166 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~li~~~ 240 (265)
T cd06605 166 MAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP--PDGIFELLQYIVNEPPP-RL-PS-GKFSPDFQDFVNLC 240 (265)
T ss_pred cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc--cccHHHHHHHHhcCCCC-CC-Ch-hhcCHHHHHHHHHH
Confidence 4577777677889999999999999999999995421100 00000001111111110 00 00 00123355677789
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.|++
T Consensus 241 l~~~p~~Rpt~~~ll 255 (265)
T cd06605 241 LIKDPRERPSYKELL 255 (265)
T ss_pred cCCCchhCcCHHHHh
Confidence 999999999998874
No 112
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.91 E-value=1.7e-06 Score=82.23 Aligned_cols=84 Identities=17% Similarity=0.336 Sum_probs=53.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|+++|+.|..... .+. ....+......+.. .. ....+.++...|
T Consensus 168 ~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~-~~---~~~~l~~li~~~ 236 (256)
T cd08220 168 ISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN------LPA-LVLKIMSGTFAPIS-DR---YSPDLRQLILSM 236 (256)
T ss_pred cCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc------hHH-HHHHHHhcCCCCCC-CC---cCHHHHHHHHHH
Confidence 45676666667889999999999999999999853211 000 11111111111000 11 123455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.|++
T Consensus 237 l~~~p~~Rpt~~~ll 251 (256)
T cd08220 237 LNLDPSKRPQLSQIM 251 (256)
T ss_pred ccCChhhCCCHHHHh
Confidence 999999999999874
No 113
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.91 E-value=2.5e-06 Score=81.80 Aligned_cols=86 Identities=12% Similarity=0.191 Sum_probs=51.0
Q ss_pred CCchhcccc--cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTM--VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~--~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||+.... ..+.++|||||||+++|+++|+.|......-....... ......+.+. . ..-..+.++..
T Consensus 176 ~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~----~---~~~~~~~~li~ 246 (268)
T cd06624 176 MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV--GMFKIHPEIP----E---SLSAEAKNFIL 246 (268)
T ss_pred cChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh--hhhccCCCCC----c---ccCHHHHHHHH
Confidence 356665432 26789999999999999999999954211100000000 0000011111 1 11223556788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|.+||+|.||+
T Consensus 247 ~~l~~~p~~Rpt~~~ll 263 (268)
T cd06624 247 RCFEPDPDKRASAHDLL 263 (268)
T ss_pred HHcCCCchhCCCHHHHH
Confidence 99999999999999874
No 114
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.91 E-value=2.5e-06 Score=81.65 Aligned_cols=84 Identities=20% Similarity=0.282 Sum_probs=55.0
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||+......+.++||||||+++.|++| |+.|...... . ...+.+...... ....+....+.++..
T Consensus 169 y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~-------~-~~~~~~~~~~~~---~~~~~~~~~l~~li~ 237 (262)
T cd05071 169 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------R-EVLDQVERGYRM---PCPPECPESLHDLMC 237 (262)
T ss_pred ecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh-------H-HHHHHHhcCCCC---CCccccCHHHHHHHH
Confidence 356787776778999999999999999999 6666432110 0 011111111100 111223456778999
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|++.+|++||++.++
T Consensus 238 ~~l~~~p~~Rp~~~~~ 253 (262)
T cd05071 238 QCWRKEPEERPTFEYL 253 (262)
T ss_pred HHccCCcccCCCHHHH
Confidence 9999999999999876
No 115
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.91 E-value=1.9e-06 Score=84.35 Aligned_cols=84 Identities=24% Similarity=0.274 Sum_probs=53.1
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|++| |+.|...... . ...+.+........ . ......+.++...
T Consensus 190 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~-~~~~~~~~~~~~~~-~--~~~~~~~~~li~~ 258 (303)
T cd05088 190 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------A-ELYEKLPQGYRLEK-P--LNCDDEVYDLMRQ 258 (303)
T ss_pred cCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh-------H-HHHHHHhcCCcCCC-C--CCCCHHHHHHHHH
Confidence 45777666677899999999999999998 8888432110 0 00111111111000 0 1112345678899
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.+++
T Consensus 259 ~l~~~p~~Rp~~~~il 274 (303)
T cd05088 259 CWREKPYERPSFAQIL 274 (303)
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999998863
No 116
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.91 E-value=1.4e-06 Score=83.26 Aligned_cols=83 Identities=19% Similarity=0.378 Sum_probs=53.6
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||+++.|+++ |+.|...... . ...+.+......+. ...+...+.+++..
T Consensus 171 ~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~---~~~~~~~~~~~i~~ 239 (261)
T cd05148 171 TAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN-------H-EVYDQITAGYRMPC---PAKCPQEIYKIMLE 239 (261)
T ss_pred cCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH-------H-HHHHHHHhCCcCCC---CCCCCHHHHHHHHH
Confidence 45777666677889999999999999998 7888532110 0 01111111111111 11223456688899
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||+|+++
T Consensus 240 ~l~~~p~~Rpt~~~l 254 (261)
T cd05148 240 CWAAEPEDRPSFKAL 254 (261)
T ss_pred HcCCCchhCcCHHHH
Confidence 999999999999886
No 117
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.91 E-value=1.9e-06 Score=82.27 Aligned_cols=83 Identities=23% Similarity=0.382 Sum_probs=54.3
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|+||||+++.|+++ |+.|..... .. ...+.+......+. .......+.++...
T Consensus 170 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-------~~-~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 238 (260)
T cd05070 170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN-------NR-EVLEQVERGYRMPC---PQDCPISLHELMLQ 238 (260)
T ss_pred cChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC-------HH-HHHHHHHcCCCCCC---CCcCCHHHHHHHHH
Confidence 45777766778899999999999999999 777743211 00 01111111111111 11223457789999
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|+..+|++||+|.++
T Consensus 239 ~l~~~p~~Rpt~~~l 253 (260)
T cd05070 239 CWKKDPEERPTFEYL 253 (260)
T ss_pred HcccCcccCcCHHHH
Confidence 999999999999876
No 118
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.90 E-value=1.6e-06 Score=87.46 Aligned_cols=79 Identities=24% Similarity=0.283 Sum_probs=55.1
Q ss_pred chhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccc--cCCCCCCcccchHHHHHHHHHHHHh
Q 009771 434 GKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL--DQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 434 ~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
||...-...+.|+|||.|||+++|+.| |..|+..+.-- ++-+.+ +-|+. ..+-|..+|.++..+
T Consensus 435 PEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS--------qVY~LLEkgyRM~-----~PeGCPpkVYeLMra 501 (1157)
T KOG4278|consen 435 PESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYGLLEKGYRMD-----GPEGCPPKVYELMRA 501 (1157)
T ss_pred cccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH--------HHHHHHhcccccc-----CCCCCCHHHHHHHHH
Confidence 444444567899999999999999996 77774322100 011122 22342 234578899999999
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|.+||++.|+
T Consensus 502 CW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 502 CWNWSPSDRPSFAEI 516 (1157)
T ss_pred HhcCCcccCccHHHH
Confidence 999999999998874
No 119
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.90 E-value=2e-06 Score=83.28 Aligned_cols=92 Identities=23% Similarity=0.259 Sum_probs=54.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccc-cccccCC---Ccc---ccccccCCCCCCcccchHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSS-LSSSSGP---KIM---LINVLDQRLSPPVNQKIVQDIILV 504 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~-~~~~~~~---~~~---~~~~~d~~l~~~~~~~~~~~~~~~ 504 (526)
..||+......+.++|+|||||+++|++|++.|...... ......+ ... ..+.+......+ ........+
T Consensus 179 ~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 255 (284)
T cd05079 179 YAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLP---RPPNCPEEV 255 (284)
T ss_pred cCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCC---CCCCCCHHH
Confidence 346766556678899999999999999998877432110 0000000 000 011111111100 011124567
Q ss_pred HHHHHhcCCCCCCCCCCccccC
Q 009771 505 STIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 505 ~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.++...|++.+|++||++.||+
T Consensus 256 ~~li~~~l~~~p~~Rpt~~~il 277 (284)
T cd05079 256 YQLMRKCWEFQPSKRTTFQNLI 277 (284)
T ss_pred HHHHHHHccCCcccCcCHHHHH
Confidence 7899999999999999999873
No 120
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.90 E-value=1.3e-06 Score=83.06 Aligned_cols=84 Identities=20% Similarity=0.320 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++||||||++++|+++ |+.|...... . ...+.+........... ....+.+++..
T Consensus 168 ~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~~---~~~~~~~l~~~ 236 (256)
T cd05112 168 SSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-------S-EVVETINAGFRLYKPRL---ASQSVYELMQH 236 (256)
T ss_pred cCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-------H-HHHHHHhCCCCCCCCCC---CCHHHHHHHHH
Confidence 45777766778889999999999999998 8888532110 0 00000000000000000 12457788999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 237 ~l~~~p~~Rp~~~~~l 252 (256)
T cd05112 237 CWKERPEDRPSFSLLL 252 (256)
T ss_pred HcccChhhCCCHHHHH
Confidence 9999999999999873
No 121
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.90 E-value=2.9e-06 Score=81.15 Aligned_cols=87 Identities=16% Similarity=0.203 Sum_probs=54.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+|||||+++|+++|+.|..... .......+.+.....++. . .......+.++...|
T Consensus 173 ~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~i~~c 244 (267)
T cd08224 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIEKCDYPPL-P-ADHYSEELRDLVSRC 244 (267)
T ss_pred cCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC------ccHHHHHhhhhcCCCCCC-C-hhhcCHHHHHHHHHH
Confidence 35777666678889999999999999999999843110 000001111111111111 0 012233566778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.+|+
T Consensus 245 l~~~p~~Rp~~~~il 259 (267)
T cd08224 245 INPDPEKRPDISYVL 259 (267)
T ss_pred cCCCcccCCCHHHHH
Confidence 999999999998863
No 122
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.90 E-value=2.6e-06 Score=81.71 Aligned_cols=83 Identities=24% Similarity=0.342 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|++| |+.|....... .....++.......... ....+.++.-.
T Consensus 180 ~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~---~~~~~~~li~~ 248 (269)
T cd05044 180 MAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--------EVLQHVTAGGRLQKPEN---CPDKIYQLMTN 248 (269)
T ss_pred cCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--------HHHHHHhcCCccCCccc---chHHHHHHHHH
Confidence 45787777788999999999999999998 88884321110 01111111110000011 12345678889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|.+||+|.+|
T Consensus 249 ~l~~~p~~Rp~~~~i 263 (269)
T cd05044 249 CWAQDPSERPTFDRI 263 (269)
T ss_pred HcCCCcccCCCHHHH
Confidence 999999999999987
No 123
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.90 E-value=1.3e-06 Score=83.23 Aligned_cols=84 Identities=23% Similarity=0.363 Sum_probs=54.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|+||||++++|++| |+.|...... ....+.+........ .......+.+++..
T Consensus 168 ~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 236 (256)
T cd05059 168 APPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--------SEVVESVSAGYRLYR---PKLAPTEVYTIMYS 236 (256)
T ss_pred cCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--------HHHHHHHHcCCcCCC---CCCCCHHHHHHHHH
Confidence 45777766778889999999999999999 7777432110 001111111111000 01123457789999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||+|.||+
T Consensus 237 cl~~~p~~Rpt~~~~l 252 (256)
T cd05059 237 CWHEKPEDRPAFKKLL 252 (256)
T ss_pred HhcCChhhCcCHHHHH
Confidence 9999999999999874
No 124
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.90 E-value=3.4e-06 Score=86.40 Aligned_cols=81 Identities=22% Similarity=0.357 Sum_probs=60.9
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccC--CCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQ--RLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~~la 508 (526)
..||.....+.+.++|||.|||.++||+| |..| |+.. ....+.+.+|. ++. ....|-..+.+++
T Consensus 282 CaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEeP------W~G~--~g~qIL~~iD~~erLp-----RPk~csedIY~im 348 (1039)
T KOG0199|consen 282 CAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEP------WVGC--RGIQILKNIDAGERLP-----RPKYCSEDIYQIM 348 (1039)
T ss_pred cCHhHhccccccccchhhhhhhhHHhhhccCCCC------CCCC--CHHHHHHhccccccCC-----CCCCChHHHHHHH
Confidence 35888888999999999999999999997 4555 3321 22235555553 343 3345778889999
Q ss_pred HhcCCCCCCCCCCcccc
Q 009771 509 FACLSSQPKSRPTMQRI 525 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v 525 (526)
..|+++.|.|||+++++
T Consensus 349 k~cWah~paDRptFsai 365 (1039)
T KOG0199|consen 349 KNCWAHNPADRPTFSAI 365 (1039)
T ss_pred HHhccCCccccccHHHH
Confidence 99999999999998765
No 125
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.89 E-value=1.8e-06 Score=82.92 Aligned_cols=84 Identities=21% Similarity=0.341 Sum_probs=55.0
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccc-cCCCCCCcccchHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL-DQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~~la 508 (526)
...||+......+.++|||||||+++|+++ |+.|....... + ....+. +..+.. ..+....+.++.
T Consensus 177 y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~------~-~~~~i~~~~~~~~-----~~~~~~~~~~li 244 (269)
T cd05065 177 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ------D-VINAIEQDYRLPP-----PMDCPTALHQLM 244 (269)
T ss_pred ecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH------H-HHHHHHcCCcCCC-----cccCCHHHHHHH
Confidence 346787777778899999999999999886 99885321110 0 000010 111111 112234566889
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|.+||+|.+|+
T Consensus 245 ~~~l~~~p~~Rp~~~~i~ 262 (269)
T cd05065 245 LDCWQKDRNARPKFGQIV 262 (269)
T ss_pred HHHcCCChhhCcCHHHHH
Confidence 999999999999999873
No 126
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.89 E-value=1.4e-05 Score=52.87 Aligned_cols=34 Identities=38% Similarity=0.620 Sum_probs=12.5
Q ss_pred CCEEEccCccCCccCCcccCCCCCCCEEEccCCCC
Q 009771 127 LTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNL 161 (526)
Q Consensus 127 L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l 161 (526)
|++|++++|+++ .+|+.+++|++|++|++++|++
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i 36 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPI 36 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCC
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCC
Confidence 344444444443 2333334444444444444433
No 127
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=97.88 E-value=1.6e-06 Score=83.24 Aligned_cols=83 Identities=22% Similarity=0.289 Sum_probs=52.5
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccc-cccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLIN-VLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||+......+.++|+||||++++|+++ |+.|....... ...+ +......+.. . .....+.++..
T Consensus 181 ~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~-~---~~~~~~~~li~ 248 (272)
T cd05075 181 IAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--------EIYDYLRQGNRLKQP-P---DCLDGLYSLMS 248 (272)
T ss_pred CCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHcCCCCCCC-C---CCCHHHHHHHH
Confidence 45666666677889999999999999999 67774321110 0111 1111100000 1 12234668889
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.|++
T Consensus 249 ~~l~~~p~~Rps~~~l~ 265 (272)
T cd05075 249 SCWLLNPKDRPSFETLR 265 (272)
T ss_pred HHcCCCcccCcCHHHHH
Confidence 99999999999999863
No 128
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.88 E-value=2.1e-06 Score=82.77 Aligned_cols=83 Identities=29% Similarity=0.292 Sum_probs=54.0
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|..... +......+.+..... ........+.++...
T Consensus 188 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~ 256 (277)
T cd05032 188 MAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS-------NEEVLKFVIDGGHLD----LPENCPDKLLELMRM 256 (277)
T ss_pred cCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC-------HHHHHHHHhcCCCCC----CCCCCCHHHHHHHHH
Confidence 45777766778899999999999999998 888743211 000011111111110 011123456789999
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.|+
T Consensus 257 ~l~~~p~~Rpt~~~l 271 (277)
T cd05032 257 CWQYNPKMRPTFLEI 271 (277)
T ss_pred HcCCChhhCCCHHHH
Confidence 999999999999886
No 129
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.88 E-value=3.5e-06 Score=80.12 Aligned_cols=84 Identities=20% Similarity=0.328 Sum_probs=52.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||||+++.|+++|+.|..... + ......+......+.. .... ..+.++...|
T Consensus 167 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-~------~~~~~~~~~~~~~~~~-~~~~---~~~~~li~~~ 235 (255)
T cd08219 167 VPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS-W------KNLILKVCQGSYKPLP-SHYS---YELRSLIKQM 235 (255)
T ss_pred cCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC-H------HHHHHHHhcCCCCCCC-cccC---HHHHHHHHHH
Confidence 35777766778889999999999999999999954211 0 0000111011111000 1111 2344666789
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 236 l~~~P~~Rp~~~~il 250 (255)
T cd08219 236 FKRNPRSRPSATTIL 250 (255)
T ss_pred HhCCcccCCCHHHHh
Confidence 999999999999874
No 130
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.88 E-value=1.5e-06 Score=83.82 Aligned_cols=84 Identities=26% Similarity=0.298 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||++.|++| |+.|..... +......+........ .......+.++...
T Consensus 188 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~ 256 (277)
T cd05062 188 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS-------NEQVLRFVMEGGLLDK----PDNCPDMLFELMRM 256 (277)
T ss_pred cChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHHHHcCCcCCC----CCCCCHHHHHHHHH
Confidence 45776666677899999999999999999 677743211 0000111111111110 01123356788999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 257 ~l~~~p~~Rps~~e~l 272 (277)
T cd05062 257 CWQYNPKMRPSFLEII 272 (277)
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999999874
No 131
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.87 E-value=2.2e-06 Score=86.70 Aligned_cols=85 Identities=20% Similarity=0.301 Sum_probs=53.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|...... .......+............ ..++.++...
T Consensus 283 ~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~ 352 (375)
T cd05104 283 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-------DSKFYKMIKEGYRMLSPECA---PSEMYDIMKS 352 (375)
T ss_pred eChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-------hHHHHHHHHhCccCCCCCCC---CHHHHHHHHH
Confidence 35777666778899999999999999998 7777432110 00011111111111000111 2345678899
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 353 cl~~dP~~RPs~~eil 368 (375)
T cd05104 353 CWDADPLKRPTFKQIV 368 (375)
T ss_pred HccCChhHCcCHHHHH
Confidence 9999999999999874
No 132
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.87 E-value=3.6e-06 Score=79.84 Aligned_cols=86 Identities=19% Similarity=0.266 Sum_probs=54.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|+++|+.|........ .....+......+ ......-..+.++...|
T Consensus 170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~~l~~~i~~~ 240 (260)
T cd06606 170 MAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM------AALYKIGSSGEPP---EIPEHLSEEAKDFLRKC 240 (260)
T ss_pred cCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH------HHHHhccccCCCc---CCCcccCHHHHHHHHHh
Confidence 35777776678999999999999999999999954322000 0011111101100 00011123455677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.|++
T Consensus 241 l~~~p~~Rp~~~~ll 255 (260)
T cd06606 241 LRRDPKKRPTADELL 255 (260)
T ss_pred CcCChhhCCCHHHHh
Confidence 999999999999874
No 133
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.87 E-value=1.8e-06 Score=90.39 Aligned_cols=84 Identities=24% Similarity=0.304 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|..... .......+......+.. .. ...++.++...|
T Consensus 212 ~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-------~~~~~~~~~~~~~~~~~-~~---~~~~l~~li~~~ 280 (496)
T PTZ00283 212 VAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-------MEEVMHKTLAGRYDPLP-PS---ISPEMQEIVTAL 280 (496)
T ss_pred eCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHhcCCCCCCC-CC---CCHHHHHHHHHH
Confidence 45777776778899999999999999999999953210 00001111111111000 11 123455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|.+||++.+++
T Consensus 281 L~~dP~~RPs~~ell 295 (496)
T PTZ00283 281 LSSDPKRRPSSSKLL 295 (496)
T ss_pred cccChhhCcCHHHHH
Confidence 999999999998863
No 134
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.87 E-value=1.9e-06 Score=83.65 Aligned_cols=84 Identities=21% Similarity=0.281 Sum_probs=54.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|+++ |..|...... ......+.+....+.. .....++.++...
T Consensus 199 ~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~l~~li~~ 267 (288)
T cd05050 199 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-------EEVIYYVRDGNVLSCP----DNCPLELYNLMRL 267 (288)
T ss_pred cCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHhcCCCCCCC----CCCCHHHHHHHHH
Confidence 35777766778899999999999999997 8777432110 0001111111111111 1123456778999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 268 ~l~~~p~~Rpt~~el~ 283 (288)
T cd05050 268 CWSKLPSDRPSFASIN 283 (288)
T ss_pred HcccCcccCCCHHHHH
Confidence 9999999999999873
No 135
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=97.86 E-value=4.1e-06 Score=84.59 Aligned_cols=88 Identities=18% Similarity=0.192 Sum_probs=55.7
Q ss_pred CCCchhcc---cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHH
Q 009771 431 SLNGKLAH---TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 431 ~l~~~~~~---~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 507 (526)
.+.||... ....+..+|||+||+|+.||+||.-|.- +..-....+..+ ...+-+++. .....+..+|.+|
T Consensus 556 wmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVG--rG~l~pd~s----~~~s~~pk~mk~L 628 (678)
T KOG0193|consen 556 WMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVG--RGYLMPDLS----KIRSNCPKAMKRL 628 (678)
T ss_pred hhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEec--ccccCccch----hhhccCHHHHHHH
Confidence 45577654 3357889999999999999999999953 110000000000 000111211 1223466678899
Q ss_pred HHhcCCCCCCCCCCcccc
Q 009771 508 AFACLSSQPKSRPTMQRI 525 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v 525 (526)
...|+..+|++||...++
T Consensus 629 l~~C~~~~~~eRP~F~~i 646 (678)
T KOG0193|consen 629 LSDCWKFDREERPLFPQL 646 (678)
T ss_pred HHHHHhcCcccCccHHHH
Confidence 999999999999998775
No 136
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.86 E-value=4.4e-06 Score=81.11 Aligned_cols=92 Identities=20% Similarity=0.244 Sum_probs=55.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc---CCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||.......+.++||||+|+++.|++||+.|...... ....+......+.+ +.+.... .........+.++.
T Consensus 170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li 246 (287)
T cd06621 170 MAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGE--PPLGPIELLSYIVNMPNPELKDEP-GNGIKWSEEFKDFI 246 (287)
T ss_pred cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccC--CCCChHHHHHHHhcCCchhhccCC-CCCCchHHHHHHHH
Confidence 457766666778899999999999999999999543211 00000000111111 1111000 00011234566888
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||+|.||+
T Consensus 247 ~~~l~~~p~~Rpt~~eil 264 (287)
T cd06621 247 KQCLEKDPTRRPTPWDML 264 (287)
T ss_pred HHHcCCCcccCCCHHHHH
Confidence 999999999999999874
No 137
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=97.85 E-value=2.2e-06 Score=82.77 Aligned_cols=84 Identities=17% Similarity=0.282 Sum_probs=54.1
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++||||||++++|+++ |+.|....... .+...+........ .......+.++...
T Consensus 186 ~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 254 (280)
T cd05043 186 MALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--------EMAAYLKDGYRLAQ---PINCPDELFAVMAC 254 (280)
T ss_pred cCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHcCCCCCC---CCcCCHHHHHHHHH
Confidence 45777666678899999999999999999 99985432110 01111100000000 01112346788999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||++.||+
T Consensus 255 ~l~~~p~~Rps~~~~~ 270 (280)
T cd05043 255 CWALDPEERPSFSQLV 270 (280)
T ss_pred HcCCChhhCCCHHHHH
Confidence 9999999999999873
No 138
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.84 E-value=2.2e-06 Score=81.54 Aligned_cols=84 Identities=18% Similarity=0.304 Sum_probs=53.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|||||||+++|+++|+.|..... . .....++......+.. .... ..+.++-..|
T Consensus 169 ~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~-~~~~~~~~~~~~~~~~-~~~~---~~~~~~i~~~ 237 (257)
T cd08225 169 LSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------L-HQLVLKICQGYFAPIS-PNFS---RDLRSLISQL 237 (257)
T ss_pred cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------H-HHHHHHHhcccCCCCC-CCCC---HHHHHHHHHH
Confidence 34776666678899999999999999999999953211 0 0011112222221111 1111 2345666789
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||+|.||+
T Consensus 238 l~~~p~~Rpt~~~ll 252 (257)
T cd08225 238 FKVSPRDRPSITSIL 252 (257)
T ss_pred hccChhhCcCHHHHh
Confidence 999999999999874
No 139
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.84 E-value=2.4e-06 Score=83.24 Aligned_cols=88 Identities=20% Similarity=0.240 Sum_probs=52.9
Q ss_pred CCchhcccccccccccccccceeeeehhc--CCCCCccccccccccCCCccccccc---cCCCCCCcccchHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM--GRHPGELLSSLSSSSGPKIMLINVL---DQRLSPPVNQKIVQDIILVST 506 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt--g~~P~~~~~~~~~~~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~~ 506 (526)
..||+......+.++|||||||+++|+++ |..|....... .... ...+.. +..... ........++.+
T Consensus 199 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~--~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~l~~ 271 (296)
T cd05051 199 MAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ--QVIE--NAGHFFRDDGRQIYL---PRPPNCPKDIYE 271 (296)
T ss_pred cCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH--HHHH--HHHhccccccccccC---CCccCCCHHHHH
Confidence 45777766678999999999999999998 55553221100 0000 000000 001000 011112246788
Q ss_pred HHHhcCCCCCCCCCCccccC
Q 009771 507 IAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 507 la~~C~~~~p~~RP~m~~v~ 526 (526)
++..|++.+|++||+|.||+
T Consensus 272 li~~cl~~~p~~Rpt~~el~ 291 (296)
T cd05051 272 LMLECWRRDEEDRPTFREIH 291 (296)
T ss_pred HHHHHhccChhcCCCHHHHH
Confidence 99999999999999999873
No 140
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=97.84 E-value=2e-06 Score=84.28 Aligned_cols=84 Identities=21% Similarity=0.334 Sum_probs=54.3
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|++| |+.|...... ....+++......+. ...+...+.++...
T Consensus 178 ~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 246 (303)
T cd05110 178 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--------REIPDLLEKGERLPQ---PPICTIDVYMVMVK 246 (303)
T ss_pred CCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHCCCCCCC---CCCCCHHHHHHHHH
Confidence 45777766778899999999999999997 8888532110 001111111110000 01123456788999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||+|.||+
T Consensus 247 c~~~~p~~Rp~~~~l~ 262 (303)
T cd05110 247 CWMIDADSRPKFKELA 262 (303)
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999999863
No 141
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.84 E-value=4.1e-06 Score=84.62 Aligned_cols=85 Identities=21% Similarity=0.320 Sum_probs=53.9
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||+++|+++ |+.|...... .......+............ ...+.++...
T Consensus 281 ~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~ 350 (374)
T cd05106 281 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV-------NSKFYKMVKRGYQMSRPDFA---PPEIYSIMKM 350 (374)
T ss_pred eCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc-------cHHHHHHHHcccCccCCCCC---CHHHHHHHHH
Confidence 45777666678899999999999999997 9998543211 00011111111111100111 1345567789
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 351 cl~~dp~~RPs~~~l~ 366 (374)
T cd05106 351 CWNLEPTERPTFSQIS 366 (374)
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999999874
No 142
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.83 E-value=1.9e-05 Score=52.15 Aligned_cols=37 Identities=46% Similarity=0.741 Sum_probs=26.8
Q ss_pred CCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCC
Q 009771 149 RNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLS 186 (526)
Q Consensus 149 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 186 (526)
++|++|++++|+++ .+|..++++++|++|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 46788888888887 56666778888888888888776
No 143
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.82 E-value=1.8e-06 Score=84.11 Aligned_cols=88 Identities=22% Similarity=0.210 Sum_probs=51.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCC--CCCccccccccccCCCcccccccc---CCCCCCcccchHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGR--HPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVST 506 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~--~P~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~ 506 (526)
..||+......+.++|||||||+++|++++. .|....... ... . ...+..+ ......... .....+.+
T Consensus 198 ~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~--~~~-~-~~~~~~~~~~~~~~~~~~~---~~~~~l~~ 270 (295)
T cd05097 198 MAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE--QVI-E-NTGEFFRNQGRQIYLSQTP---LCPSPVFK 270 (295)
T ss_pred cChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH--HHH-H-HHHHhhhhccccccCCCCC---CCCHHHHH
Confidence 3467666667889999999999999999854 443211100 000 0 0000000 111000001 11246778
Q ss_pred HHHhcCCCCCCCCCCccccC
Q 009771 507 IAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 507 la~~C~~~~p~~RP~m~~v~ 526 (526)
++..|++.+|++||+|.+|+
T Consensus 271 li~~~l~~~p~~RPs~~~i~ 290 (295)
T cd05097 271 LMMRCWSRDIKDRPTFNKIH 290 (295)
T ss_pred HHHHHcCCCchhCcCHHHHH
Confidence 99999999999999999873
No 144
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.82 E-value=2.3e-06 Score=83.95 Aligned_cols=84 Identities=21% Similarity=0.299 Sum_probs=52.9
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|+++ |+.|..... ...+.+.+........ ......++.++...
T Consensus 209 ~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 277 (307)
T cd05098 209 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEELFKLLKEGHRMDK---PSNCTNELYMMMRD 277 (307)
T ss_pred eChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHHcCCCCCC---CCcCCHHHHHHHHH
Confidence 45776666667889999999999999998 777743211 0001111111111111 11122355577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||+|.||+
T Consensus 278 ~l~~~p~~Rps~~evl 293 (307)
T cd05098 278 CWHAVPSQRPTFKQLV 293 (307)
T ss_pred HcccChhhCcCHHHHH
Confidence 9999999999999874
No 145
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.82 E-value=2.8e-06 Score=82.88 Aligned_cols=88 Identities=22% Similarity=0.223 Sum_probs=52.0
Q ss_pred CCchhcccccccccccccccceeeeehhc--CCCCCccccccccccCCCcccccccc---CCCCCCcccchHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM--GRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVST 506 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt--g~~P~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~ 506 (526)
..||.......+.++|||||||+++|++| |..|......- ... . ...+... ..... .....+...+.+
T Consensus 199 ~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~--~~~-~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 271 (296)
T cd05095 199 MSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE--QVI-E-NTGEFFRDQGRQVYL---PKPALCPDSLYK 271 (296)
T ss_pred CCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH--HHH-H-HHHHHHhhccccccC---CCCCCCCHHHHH
Confidence 34665555677889999999999999998 55563211100 000 0 0000000 00100 001112356778
Q ss_pred HHHhcCCCCCCCCCCccccC
Q 009771 507 IAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 507 la~~C~~~~p~~RP~m~~v~ 526 (526)
+...|++.+|++||+|.||+
T Consensus 272 li~~cl~~~p~~Rp~~~~i~ 291 (296)
T cd05095 272 LMLSCWRRNAKERPSFQEIH 291 (296)
T ss_pred HHHHHcCCCcccCCCHHHHH
Confidence 99999999999999999873
No 146
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.81 E-value=3.9e-06 Score=81.46 Aligned_cols=86 Identities=19% Similarity=0.203 Sum_probs=53.2
Q ss_pred CCchhcccc---cccccccccccceeeeehhcCCCCCccccccccccCCCccccccc---cCCCCCCcccchHHHHHHHH
Q 009771 432 LNGKLAHTM---VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL---DQRLSPPVNQKIVQDIILVS 505 (526)
Q Consensus 432 l~~~~~~~~---~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~ 505 (526)
..||..... ..+.++|||||||+++|+++|+.|........ ..+.++. .+.+.... ......++.
T Consensus 174 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~l~ 244 (288)
T cd06616 174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF------DQLTQVVKGDPPILSNSE---EREFSPSFV 244 (288)
T ss_pred cCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH------HHHhhhcCCCCCcCCCcC---CCccCHHHH
Confidence 456665443 57889999999999999999999943211100 0011111 11221111 011223466
Q ss_pred HHHHhcCCCCCCCCCCccccC
Q 009771 506 TIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 506 ~la~~C~~~~p~~RP~m~~v~ 526 (526)
++.-.|++.+|++||++.||+
T Consensus 245 ~li~~~l~~~p~~Rpt~~~i~ 265 (288)
T cd06616 245 NFINLCLIKDESKRPKYKELL 265 (288)
T ss_pred HHHHHHccCChhhCcCHHHHh
Confidence 778899999999999999874
No 147
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.81 E-value=2.6e-06 Score=81.08 Aligned_cols=84 Identities=18% Similarity=0.256 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++||||||++++|+++ |+.|..... ... +...+.....+.. .......+.++...
T Consensus 166 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~------~~~--~~~~~~~~~~~~~---~~~~~~~~~~li~~ 234 (256)
T cd05082 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LKD--VVPRVEKGYKMDA---PDGCPPVVYDVMKQ 234 (256)
T ss_pred cCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHH--HHHHHhcCCCCCC---CCCCCHHHHHHHHH
Confidence 45787777778899999999999999997 888743110 000 0000111111000 01123456678889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.+++
T Consensus 235 ~l~~~p~~Rpt~~~l~ 250 (256)
T cd05082 235 CWHLDAATRPSFLQLR 250 (256)
T ss_pred HhcCChhhCcCHHHHH
Confidence 9999999999999863
No 148
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.81 E-value=2.7e-06 Score=83.39 Aligned_cols=84 Identities=23% Similarity=0.308 Sum_probs=52.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |..|..... ...+.+.+........ .......+.++...
T Consensus 206 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 274 (304)
T cd05101 206 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKLLKEGHRMDK---PANCTNELYMMMRD 274 (304)
T ss_pred eCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--------HHHHHHHHHcCCcCCC---CCCCCHHHHHHHHH
Confidence 45776666677889999999999999998 666632110 0001111111111000 11223456678889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|.+||+|.||+
T Consensus 275 cl~~~p~~Rps~~e~l 290 (304)
T cd05101 275 CWHAIPSHRPTFKQLV 290 (304)
T ss_pred HcccChhhCCCHHHHH
Confidence 9999999999999874
No 149
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.81 E-value=6.4e-06 Score=78.76 Aligned_cols=88 Identities=18% Similarity=0.254 Sum_probs=52.6
Q ss_pred Cchhcccc-cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 433 NGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 433 ~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
.||+.... ..+.++|+|||||+++|++||+.|....... ....+ ....-.+...... ....-...+.++...|
T Consensus 174 ~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~li~~~ 247 (267)
T cd06610 174 APEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--KVLML--TLQNDPPSLETGA--DYKKYSKSFRKMISLC 247 (267)
T ss_pred ChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--hhHHH--HhcCCCCCcCCcc--ccccccHHHHHHHHHH
Confidence 46665544 6788999999999999999999995432110 00000 0000011111100 0001123455777899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.|++
T Consensus 248 l~~~p~~Rp~~~~ll 262 (267)
T cd06610 248 LQKDPSKRPTAEELL 262 (267)
T ss_pred cCCChhhCcCHHHHh
Confidence 999999999999874
No 150
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.80 E-value=5.2e-06 Score=81.25 Aligned_cols=86 Identities=20% Similarity=0.322 Sum_probs=54.9
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|||||||+++|++| |+.|...... .......++.......... ....+.++..
T Consensus 209 y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~li~ 278 (302)
T cd05055 209 WMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV-------DSKFYKLIKEGYRMAQPEH---APAEIYDIMK 278 (302)
T ss_pred cCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-------hHHHHHHHHcCCcCCCCCC---CCHHHHHHHH
Confidence 345777666678899999999999999998 8888432111 0001112222111111011 1234667899
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 279 ~cl~~~p~~Rpt~~ell 295 (302)
T cd05055 279 TCWDADPLKRPTFKQIV 295 (302)
T ss_pred HHcCCCchhCcCHHHHH
Confidence 99999999999999874
No 151
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.80 E-value=5.9e-06 Score=79.34 Aligned_cols=76 Identities=21% Similarity=0.313 Sum_probs=47.0
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 520 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 520 (526)
..+.++|||||||+++|+++|+.|.......... ........+.... .. ....+.++...|+..+|.+||
T Consensus 192 ~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~---~~---~~~~~~~li~~~l~~~p~~Rp 261 (272)
T cd06637 192 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL----FLIPRNPAPRLKS---KK---WSKKFQSFIESCLVKNHSQRP 261 (272)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH----HHHhcCCCCCCCC---CC---cCHHHHHHHHHHcCCChhhCC
Confidence 4677899999999999999999995422110000 0000000111110 11 123455777899999999999
Q ss_pred CccccC
Q 009771 521 TMQRIS 526 (526)
Q Consensus 521 ~m~~v~ 526 (526)
++.||+
T Consensus 262 t~~~il 267 (272)
T cd06637 262 TTEQLM 267 (272)
T ss_pred CHHHHh
Confidence 999874
No 152
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.79 E-value=5.8e-06 Score=79.19 Aligned_cols=88 Identities=20% Similarity=0.317 Sum_probs=51.0
Q ss_pred CCchhcc---cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAH---TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~---~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||... ....+.++|||||||++.|++||+.|......... ...+......++...........+.++.
T Consensus 173 ~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li 245 (267)
T cd06646 173 MAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-------LFLMSKSNFQPPKLKDKTKWSSTFHNFV 245 (267)
T ss_pred cCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-------heeeecCCCCCCCCccccccCHHHHHHH
Confidence 3455442 23457789999999999999999998532211100 0001111111100000001123456778
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
-.|+..+|++||++.+++
T Consensus 246 ~~~l~~~P~~Rp~~~~il 263 (267)
T cd06646 246 KISLTKNPKKRPTAERLL 263 (267)
T ss_pred HHHhhCChhhCcCHHHHh
Confidence 899999999999999874
No 153
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=97.79 E-value=3.3e-06 Score=81.16 Aligned_cols=81 Identities=28% Similarity=0.420 Sum_probs=51.2
Q ss_pred Cchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCcccccccc-CCCCCCcccchHHHHHHHHHHHHh
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLD-QRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
.||.......+.++||||||++++|+++ |+.|...... ... ...+.. ...... ......+.+++..
T Consensus 183 ~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~----~~~~~~~~~~~~~-----~~~~~~~~~l~~~ 250 (273)
T cd05074 183 ALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEI----YNYLIKGNRLKQP-----PDCLEDVYELMCQ 250 (273)
T ss_pred CHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHH----HHHHHcCCcCCCC-----CCCCHHHHHHHHH
Confidence 4565555567889999999999999999 7777432110 000 000111 011100 1123467788999
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.||
T Consensus 251 ~l~~~p~~Rps~~~~ 265 (273)
T cd05074 251 CWSPEPKCRPSFQHL 265 (273)
T ss_pred HcCCChhhCcCHHHH
Confidence 999999999999986
No 154
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=97.79 E-value=2.5e-06 Score=81.25 Aligned_cols=84 Identities=17% Similarity=0.238 Sum_probs=53.3
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|+|||||++.|++| |+.|...... ..+.+.++....++..... ..++.++-..
T Consensus 165 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~i~~~~~~~~~~~~---~~~l~~li~~ 233 (257)
T cd05116 165 YAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--------NEVTQMIESGERMECPQRC---PPEMYDLMKL 233 (257)
T ss_pred cCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHCCCCCCCCCCC---CHHHHHHHHH
Confidence 35666655667789999999999999998 8988542211 0111122222111110111 2334577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.+|+
T Consensus 234 ~~~~~p~~Rp~~~~i~ 249 (257)
T cd05116 234 CWTYGVDERPGFAVVE 249 (257)
T ss_pred HhccCchhCcCHHHHH
Confidence 9999999999999874
No 155
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.79 E-value=4e-06 Score=80.02 Aligned_cols=83 Identities=23% Similarity=0.305 Sum_probs=52.6
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|+|||||+++|++| |+.|....... ...+.+......+. .......+.++...
T Consensus 170 ~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 238 (260)
T cd05069 170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--------EVLEQVERGYRMPC---PQGCPESLHELMKL 238 (260)
T ss_pred CCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCC---CcccCHHHHHHHHH
Confidence 45777766778899999999999999999 88774321110 00011111111000 11123445667789
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||+|.+|
T Consensus 239 ~l~~~p~~Rp~~~~i 253 (260)
T cd05069 239 CWKKDPDERPTFEYI 253 (260)
T ss_pred HccCCcccCcCHHHH
Confidence 999999999999886
No 156
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.79 E-value=3.2e-06 Score=80.41 Aligned_cols=84 Identities=20% Similarity=0.321 Sum_probs=53.0
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|+|||||++.|+++ |+.|...... . ...+.+........ .......+.++...
T Consensus 164 ~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~--~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 232 (254)
T cd05083 164 TAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL------K--EVKECVEKGYRMEP---PEGCPADVYVLMTS 232 (254)
T ss_pred cCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH------H--HHHHHHhCCCCCCC---CCcCCHHHHHHHHH
Confidence 35676666677889999999999999997 8887432110 0 01111111111100 01112445678889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.|++
T Consensus 233 ~l~~~p~~Rp~~~~l~ 248 (254)
T cd05083 233 CWETEPKKRPSFHKLR 248 (254)
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999999873
No 157
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.78 E-value=2.7e-06 Score=82.65 Aligned_cols=84 Identities=29% Similarity=0.303 Sum_probs=54.1
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|+++ |+.|..... .......+++....+. .......+.++...
T Consensus 188 ~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~ 256 (288)
T cd05061 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-------NEQVLKFVMDGGYLDQ----PDNCPERVTDLMRM 256 (288)
T ss_pred cCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHcCCCCCC----CCCCCHHHHHHHHH
Confidence 45777666678899999999999999998 676743211 0001111222211110 11123457788899
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.|++
T Consensus 257 ~l~~~p~~Rps~~~ll 272 (288)
T cd05061 257 CWQFNPKMRPTFLEIV 272 (288)
T ss_pred HcCCChhHCcCHHHHH
Confidence 9999999999998863
No 158
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.78 E-value=4.1e-06 Score=79.93 Aligned_cols=83 Identities=25% Similarity=0.394 Sum_probs=53.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
.+||+......+.++|+|||||+++|++| |+.|..... .++ ..+.++.....+.... ...++.++...
T Consensus 170 ~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~--~~~~~~~~~~~~~~~~---~~~~~~~li~~ 238 (260)
T cd05067 170 TAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT------NPE--VIQNLERGYRMPRPDN---CPEELYELMRL 238 (260)
T ss_pred cCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC------hHH--HHHHHHcCCCCCCCCC---CCHHHHHHHHH
Confidence 45777766677889999999999999999 888853211 000 1111111111111011 12346678889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.++
T Consensus 239 ~l~~~p~~Rp~~~~l 253 (260)
T cd05067 239 CWKEKPEERPTFEYL 253 (260)
T ss_pred HccCChhhCCCHHHH
Confidence 999999999999876
No 159
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.78 E-value=2.2e-06 Score=83.97 Aligned_cols=91 Identities=19% Similarity=0.142 Sum_probs=52.3
Q ss_pred CCchhcccccccccccccccceeeeehhcC--CCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMG--RHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg--~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||+......+.++||||||++++|++++ +.|....... .... ...+................+...+.++..
T Consensus 207 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 282 (304)
T cd05096 207 MAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE---QVIE-NAGEFFRDQGRQVYLFRPPPCPQGLYELML 282 (304)
T ss_pred cCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH---HHHH-HHHHHhhhccccccccCCCCCCHHHHHHHH
Confidence 457776666788999999999999999875 4443221100 0000 000000000000000001112345678899
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 283 ~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 283 QCWSRDCRERPSFSDIH 299 (304)
T ss_pred HHccCCchhCcCHHHHH
Confidence 99999999999999873
No 160
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.77 E-value=6.8e-06 Score=80.21 Aligned_cols=86 Identities=16% Similarity=0.285 Sum_probs=52.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|||||||+++|++||+.|........ .......+.. +.. .....-...+.++...|
T Consensus 183 ~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~------~~~~~~~~~~--~~~-~~~~~~~~~l~~li~~~ 253 (296)
T cd06654 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATNGT--PEL-QNPEKLSAIFRDFLNRC 253 (296)
T ss_pred cCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH------hHHHHhcCCC--CCC-CCccccCHHHHHHHHHH
Confidence 45777666667889999999999999999999953211100 0000000110 000 00011112345677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.||+
T Consensus 254 l~~~p~~Rpt~~eil 268 (296)
T cd06654 254 LDMDVEKRGSAKELL 268 (296)
T ss_pred CcCCcccCcCHHHHh
Confidence 999999999999874
No 161
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.77 E-value=3.8e-06 Score=82.69 Aligned_cols=85 Identities=21% Similarity=0.308 Sum_probs=53.5
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|+|||||+++|+++ |+.|...... . ...+.+........ ......++.++..
T Consensus 202 y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~---~~~~~~~l~~li~ 270 (314)
T cd05099 202 WMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-------E-ELFKLLREGHRMDK---PSNCTHELYMLMR 270 (314)
T ss_pred ccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-------H-HHHHHHHcCCCCCC---CCCCCHHHHHHHH
Confidence 456787766678899999999999999999 7877432110 0 01111111100000 1112234557889
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|+..+|++||++.||+
T Consensus 271 ~cl~~~p~~Rps~~~ll 287 (314)
T cd05099 271 ECWHAVPTQRPTFKQLV 287 (314)
T ss_pred HHcCCCcccCcCHHHHH
Confidence 99999999999998863
No 162
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=97.77 E-value=1.2e-05 Score=77.73 Aligned_cols=95 Identities=11% Similarity=-0.007 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCcccc------cccccc-C------CCcc--ccccccCCCCCCcccc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLS------SLSSSS-G------PKIM--LINVLDQRLSPPVNQK 496 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~------~~~~~~-~------~~~~--~~~~~d~~l~~~~~~~ 496 (526)
..||.......+.++|+||||+++.|++||+.|..... .+.... . +... ................
T Consensus 173 ~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (287)
T cd07838 173 RAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSF 252 (287)
T ss_pred cChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhh
Confidence 45777766778899999999999999999987733210 000000 0 0000 0000000000000000
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 497 IVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 497 ~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
..+-...+.++...|++.+|++||+|.|++
T Consensus 253 ~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 253 VPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred hhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 011124456788899999999999999874
No 163
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.77 E-value=5.5e-06 Score=80.56 Aligned_cols=74 Identities=22% Similarity=0.319 Sum_probs=47.5
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccc---cCCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL---DQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
..+.|+|+|||||+++|+++|+.|....... . .+.++. .+.+.. ..+....+.++...|++.+|+
T Consensus 209 ~~~~~~Di~slGvi~~el~~g~~p~~~~~~~------~-~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~~p~ 276 (291)
T cd06639 209 SYDARCDVWSLGITAIELGDGDPPLFDMHPV------K-TLFKIPRNPPPTLLH-----PEKWCRSFNHFISQCLIKDFE 276 (291)
T ss_pred ccCCccchHHHHHHHHHHhhCCCCCCCCcHH------H-HHHHHhcCCCCCCCc-----ccccCHHHHHHHHHHhhcChh
Confidence 3578999999999999999999985322110 0 000000 011110 111223466888999999999
Q ss_pred CCCCccccC
Q 009771 518 SRPTMQRIS 526 (526)
Q Consensus 518 ~RP~m~~v~ 526 (526)
+||+|.|++
T Consensus 277 ~Rps~~~il 285 (291)
T cd06639 277 ARPSVTHLL 285 (291)
T ss_pred hCcCHHHHh
Confidence 999999864
No 164
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.77 E-value=4e-06 Score=85.33 Aligned_cols=85 Identities=21% Similarity=0.307 Sum_probs=54.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|+++ |+.|...... +......+........ .......+.++...
T Consensus 306 ~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~ 375 (400)
T cd05105 306 MAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV-------DSTFYNKIKSGYRMAK---PDHATQEVYDIMVK 375 (400)
T ss_pred EChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch-------hHHHHHHHhcCCCCCC---CccCCHHHHHHHHH
Confidence 45777666677899999999999999997 8888542110 0001111111111111 11223456788999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.+|+
T Consensus 376 cl~~dP~~RPt~~~l~ 391 (400)
T cd05105 376 CWNSEPEKRPSFLHLS 391 (400)
T ss_pred HCccCHhHCcCHHHHH
Confidence 9999999999998873
No 165
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.76 E-value=4e-06 Score=80.03 Aligned_cols=84 Identities=23% Similarity=0.347 Sum_probs=54.2
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|+||||++++|++| |+.|...... . ...+.+......+. ..+....+.++..
T Consensus 170 y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-------~-~~~~~~~~~~~~~~---~~~~~~~~~~~i~ 238 (261)
T cd05034 170 WTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-------R-EVLEQVERGYRMPR---PPNCPEELYDLML 238 (261)
T ss_pred ccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-------H-HHHHHHHcCCCCCC---CCCCCHHHHHHHH
Confidence 346777776778889999999999999998 8888432110 0 01111111111111 0111345678899
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|...+|++||++.|+
T Consensus 239 ~~l~~~p~~Rp~~~~l 254 (261)
T cd05034 239 QCWDKDPEERPTFEYL 254 (261)
T ss_pred HHcccCcccCCCHHHH
Confidence 9999999999999886
No 166
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.76 E-value=5.2e-06 Score=78.96 Aligned_cols=84 Identities=18% Similarity=0.343 Sum_probs=52.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||...+...+.++||||||+++.|+++|+.|..... +.....++......... . .....+.++...|
T Consensus 168 ~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~-~---~~~~~~~~~i~~~ 236 (256)
T cd08221 168 MSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN-------PLNLVVKIVQGNYTPVV-S---VYSSELISLVHSL 236 (256)
T ss_pred cCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHcCCCCCCc-c---ccCHHHHHHHHHH
Confidence 45676666667889999999999999999999853210 00001111111111100 1 1123355667789
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.|++
T Consensus 237 l~~~p~~R~s~~~ll 251 (256)
T cd08221 237 LQQDPEKRPTADEVL 251 (256)
T ss_pred cccCcccCCCHHHHh
Confidence 999999999999874
No 167
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.76 E-value=3.9e-06 Score=79.68 Aligned_cols=83 Identities=20% Similarity=0.256 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|+++ |+.|....... .....++....... .......+.++...
T Consensus 163 ~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 231 (252)
T cd05084 163 TAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------QTREAIEQGVRLPC---PELCPDAVYRLMER 231 (252)
T ss_pred cCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------HHHHHHHcCCCCCC---cccCCHHHHHHHHH
Confidence 45777666677889999999999999998 77775422110 01111111111111 11123456778899
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||+|.||
T Consensus 232 ~l~~~p~~Rps~~~~ 246 (252)
T cd05084 232 CWEYDPGQRPSFSTV 246 (252)
T ss_pred HcCCChhhCcCHHHH
Confidence 999999999999987
No 168
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.76 E-value=3.9e-06 Score=80.50 Aligned_cols=84 Identities=18% Similarity=0.317 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++||||||++++|+++ |+.|....... + ....+.+. ...+. .......+.++...
T Consensus 176 ~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~------~-~~~~~~~~-~~~~~---~~~~~~~~~~li~~ 244 (267)
T cd05066 176 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ------D-VIKAIEEG-YRLPA---PMDCPAALHQLMLD 244 (267)
T ss_pred cCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH------H-HHHHHhCC-CcCCC---CCCCCHHHHHHHHH
Confidence 45777776778899999999999999886 99884321110 0 00111111 00010 01123345678889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||+|.+|+
T Consensus 245 ~l~~~p~~Rp~~~~i~ 260 (267)
T cd05066 245 CWQKDRNERPKFEQIV 260 (267)
T ss_pred HcccCchhCCCHHHHH
Confidence 9999999999999873
No 169
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.76 E-value=4e-06 Score=79.99 Aligned_cols=83 Identities=13% Similarity=0.235 Sum_probs=53.9
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||++.|+++ |+.|....... .+...+........ +..+..++.++...
T Consensus 165 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~l~~li~~ 233 (257)
T cd05115 165 YAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------EVMSFIEQGKRLDC---PAECPPEMYALMKD 233 (257)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCCCCCC---CCCCCHHHHHHHHH
Confidence 35777666678889999999999999996 99885432110 01111111111111 11123455578999
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|+..+|++||+|.+|
T Consensus 234 c~~~~~~~Rp~~~~i 248 (257)
T cd05115 234 CWIYKWEDRPNFAKV 248 (257)
T ss_pred HcCCChhhCcCHHHH
Confidence 999999999999887
No 170
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.75 E-value=5.3e-06 Score=79.17 Aligned_cols=88 Identities=18% Similarity=0.209 Sum_probs=54.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
+.||.......+.++|+||||++++|++||+.|....... .. ......+......... .. .....+.++...|
T Consensus 167 ~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~---~~-~~~~~~~~~~~~~~~~-~~--~~~~~l~~li~~~ 239 (264)
T cd06623 167 MSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP---SF-FELMQAICDGPPPSLP-AE--EFSPEFRDFISAC 239 (264)
T ss_pred cCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc---CH-HHHHHHHhcCCCCCCC-cc--cCCHHHHHHHHHH
Confidence 4577766667788999999999999999999995432210 00 0001111111111100 11 0223555677789
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.|++
T Consensus 240 l~~~p~~R~~~~~ll 254 (264)
T cd06623 240 LQKDPKKRPSAAELL 254 (264)
T ss_pred ccCChhhCCCHHHHH
Confidence 999999999999874
No 171
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.75 E-value=5.9e-06 Score=79.87 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=51.8
Q ss_pred Cchhc-ccccccccccccccceeeeehhcCCCCCccccc---------ccccc----CCCc-cccccccCCCCCCcccch
Q 009771 433 NGKLA-HTMVVTEKCDVYSFGVVALEILMGRHPGELLSS---------LSSSS----GPKI-MLINVLDQRLSPPVNQKI 497 (526)
Q Consensus 433 ~~~~~-~~~~~~~k~dvysfGv~llElltg~~P~~~~~~---------~~~~~----~~~~-~~~~~~d~~l~~~~~~~~ 497 (526)
.||.. .....+.++|+||||++++|++||+.|...... +.... +++. ...+.++..+.... ...
T Consensus 166 aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 244 (283)
T cd07830 166 APEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFA-PTS 244 (283)
T ss_pred CceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccc-ccc
Confidence 35543 333567899999999999999999977432110 00000 0000 00111111111000 000
Q ss_pred H-----HHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 498 V-----QDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 498 ~-----~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
. .....+.++...|++.+|++||++.||+
T Consensus 245 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~ 278 (283)
T cd07830 245 LHQLIPNASPEAIDLIKDMLRWDPKKRPTASQAL 278 (283)
T ss_pred HHHHcccCCHHHHHHHHHhcccCcccCCCHHHHh
Confidence 0 1124577899999999999999999874
No 172
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.75 E-value=3.9e-06 Score=83.46 Aligned_cols=84 Identities=25% Similarity=0.356 Sum_probs=52.6
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|+++ |+.|...... . .....+....... .......++.++...
T Consensus 203 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~---~~~~~~~~l~~li~~ 271 (334)
T cd05100 203 MAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-------E-ELFKLLKEGHRMD---KPANCTHELYMIMRE 271 (334)
T ss_pred cCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-------H-HHHHHHHcCCCCC---CCCCCCHHHHHHHHH
Confidence 45666666667889999999999999998 7777432110 0 0111111111100 011123456688999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.|++
T Consensus 272 cl~~~p~~Rps~~ell 287 (334)
T cd05100 272 CWHAVPSQRPTFKQLV 287 (334)
T ss_pred HcccChhhCcCHHHHH
Confidence 9999999999999863
No 173
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.75 E-value=6.5e-06 Score=81.76 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=30.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|+|||||+++|++||+.|..
T Consensus 169 ~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 169 MSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred CCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 45787777778899999999999999999999953
No 174
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.74 E-value=4.7e-06 Score=80.69 Aligned_cols=83 Identities=23% Similarity=0.346 Sum_probs=52.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||||||++.|++| |+.|..... ...+.+.++.....+... .....+.++...
T Consensus 193 ~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~ 261 (283)
T cd05090 193 MPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--------NQEVIEMVRKRQLLPCSE---DCPPRMYSLMTE 261 (283)
T ss_pred cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHcCCcCCCCC---CCCHHHHHHHHH
Confidence 45777666678899999999999999998 887743211 001122222111111101 112345567789
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||+|.+|
T Consensus 262 cl~~~p~~Rp~~~~i 276 (283)
T cd05090 262 CWQEGPSRRPRFKDI 276 (283)
T ss_pred HcccCcccCcCHHHH
Confidence 999999999999886
No 175
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.74 E-value=4.6e-06 Score=79.07 Aligned_cols=84 Identities=18% Similarity=0.257 Sum_probs=53.6
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
.+||.......+.++|+|||||+++|++| |+.|...... ....+.++....... .......+.++...
T Consensus 162 ~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 230 (251)
T cd05041 162 TAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--------QQTRERIESGYRMPA---PQLCPEEIYRLMLQ 230 (251)
T ss_pred CChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--------HHHHHHHhcCCCCCC---CccCCHHHHHHHHH
Confidence 45777666678899999999999999999 7776432110 001111111110000 01122356778889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||++.||+
T Consensus 231 ~l~~~p~~Rp~~~ell 246 (251)
T cd05041 231 CWAYDPENRPSFSEIY 246 (251)
T ss_pred HhccChhhCcCHHHHH
Confidence 9999999999999873
No 176
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.74 E-value=5.3e-06 Score=80.89 Aligned_cols=87 Identities=15% Similarity=0.211 Sum_probs=51.8
Q ss_pred CCchhcccc----cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHH
Q 009771 432 LNGKLAHTM----VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 432 l~~~~~~~~----~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 507 (526)
..||+.... ..+.++|+||||++++|+++|+.|......- ......+++..... . ........++.++
T Consensus 181 ~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~-~-~~~~~~~~~l~~l 252 (296)
T cd06618 181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE------FEVLTKILQEEPPS-L-PPNEGFSPDFCSF 252 (296)
T ss_pred cCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH------HHHHHHHhcCCCCC-C-CCCCCCCHHHHHH
Confidence 345655433 2678999999999999999999995321000 00011122211110 0 0000122345677
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
...|...+|++||+|.+++
T Consensus 253 i~~~l~~~p~~Rp~~~~il 271 (296)
T cd06618 253 VDLCLTKDHRKRPKYRELL 271 (296)
T ss_pred HHHHccCChhhCCCHHHHh
Confidence 7899999999999998874
No 177
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.73 E-value=4.5e-06 Score=80.58 Aligned_cols=83 Identities=20% Similarity=0.306 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|....... .+.+.+......+. .......+.++...
T Consensus 178 ~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 246 (279)
T cd05109 178 MALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--------EIPDLLEKGERLPQ---PPICTIDVYMIMVK 246 (279)
T ss_pred CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCCcCCC---CccCCHHHHHHHHH
Confidence 45777666678899999999999999998 88885422110 01111111111000 01123456678889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.|+
T Consensus 247 ~l~~dp~~Rp~~~~l 261 (279)
T cd05109 247 CWMIDSECRPRFREL 261 (279)
T ss_pred HcCCChhhCcCHHHH
Confidence 999999999999886
No 178
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.73 E-value=9.7e-06 Score=78.55 Aligned_cols=95 Identities=19% Similarity=0.143 Sum_probs=53.9
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCCcccccc---------ccccCCCccccccccCC-----CCCCcccc
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGELLSSL---------SSSSGPKIMLINVLDQR-----LSPPVNQK 496 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~~~~~~---------~~~~~~~~~~~~~~d~~-----l~~~~~~~ 496 (526)
..||+.... ..+.++||||||++++|+++|+.|....... .....+........++. ........
T Consensus 168 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (288)
T cd07833 168 RAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPE 247 (288)
T ss_pred cCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcH
Confidence 456766655 6788999999999999999999874321000 00000000000000000 00000000
Q ss_pred ------hHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 497 ------IVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 497 ------~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
....-.++.++...|+..+|++||+|++|+
T Consensus 248 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 283 (288)
T cd07833 248 SLERRYPGKVSSPALDFLKACLRMDPKERLTCDELL 283 (288)
T ss_pred HHHHhcCCccchHHHHHHHHHhccCchhcccHHHHh
Confidence 001135677889999999999999999874
No 179
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.73 E-value=5.4e-06 Score=78.89 Aligned_cols=84 Identities=25% Similarity=0.308 Sum_probs=54.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||+|+++.|+++ |+.|...... ......+.+.... ......-..+.++...
T Consensus 174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~----~~~~~~~~~~~~li~~ 242 (262)
T cd00192 174 MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-------EEVLEYLRKGYRL----PKPEYCPDELYELMLS 242 (262)
T ss_pred cCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCC----CCCccCChHHHHHHHH
Confidence 45787766678899999999999999999 5888543210 0001111111110 0011113456678889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||++.|++
T Consensus 243 ~l~~~p~~Rps~~~l~ 258 (262)
T cd00192 243 CWQLDPEDRPTFSELV 258 (262)
T ss_pred HccCCcccCcCHHHHH
Confidence 9999999999998863
No 180
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.72 E-value=7.8e-06 Score=79.24 Aligned_cols=86 Identities=17% Similarity=0.294 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+|||||+++|++||+.|........ ....+......+. .........+.++...|
T Consensus 183 ~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~ 253 (286)
T cd06614 183 MAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-------ALFLITTKGIPPL--KNPEKWSPEFKDFLNKC 253 (286)
T ss_pred CCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhcCCCCC--cchhhCCHHHHHHHHHH
Confidence 45666655667889999999999999999999953211110 0011111111110 00011123456788999
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|.+||+|.+|+
T Consensus 254 l~~~p~~Rpt~~~il 268 (286)
T cd06614 254 LVKDPEKRPSAEELL 268 (286)
T ss_pred hccChhhCcCHHHHh
Confidence 999999999999874
No 181
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=97.72 E-value=9.2e-06 Score=77.11 Aligned_cols=84 Identities=20% Similarity=0.186 Sum_probs=54.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+||||++++|+++|+.|....... .....+.....++. .......+..+...|
T Consensus 168 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~li~~~ 236 (256)
T cd08530 168 MAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--------DLRYKVQRGKYPPI---PPIYSQDLQNFIRSM 236 (256)
T ss_pred cCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCCCCC---chhhCHHHHHHHHHH
Confidence 4577776667788999999999999999999995421100 00111111111111 112234467788899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.||+
T Consensus 237 l~~~p~~Rp~~~~~l 251 (256)
T cd08530 237 LQVKPKLRPNCDKIL 251 (256)
T ss_pred cCCCcccCCCHHHHh
Confidence 999999999999874
No 182
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.72 E-value=0.00013 Score=72.29 Aligned_cols=75 Identities=19% Similarity=0.279 Sum_probs=38.1
Q ss_pred cCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcE
Q 009771 225 GSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTS 304 (526)
Q Consensus 225 ~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~ 304 (526)
..+.+++.|++++|.++ .+|. -.++|+.|.++++.--..+|..+ ..+|+.|++++|.....+| .+|+.
T Consensus 49 ~~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP------~sLe~ 116 (426)
T PRK15386 49 EEARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLP------ESVRS 116 (426)
T ss_pred HHhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCcccccccc------cccce
Confidence 34566777777777655 3341 22356777776543323444333 2456666666662222333 23555
Q ss_pred EEeeCcc
Q 009771 305 LSLGGNK 311 (526)
Q Consensus 305 L~l~~n~ 311 (526)
|++..+.
T Consensus 117 L~L~~n~ 123 (426)
T PRK15386 117 LEIKGSA 123 (426)
T ss_pred EEeCCCC
Confidence 5555443
No 183
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.71 E-value=1.1e-05 Score=76.99 Aligned_cols=87 Identities=21% Similarity=0.194 Sum_probs=52.0
Q ss_pred CCchhccccc---ccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTMV---VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~~---~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||+..... .+.++||||||++++|+++|+.|............ .+.....+.+... . ..-..+.++.
T Consensus 170 ~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~--~---~~~~~~~~li 241 (264)
T cd06626 170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMF---HVGAGHKPPIPDS--L---QLSPEGKDFL 241 (264)
T ss_pred cChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHH---HHhcCCCCCCCcc--c---ccCHHHHHHH
Confidence 4566655444 78899999999999999999999542210000000 0011111111110 1 1122344667
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||+|.|++
T Consensus 242 ~~~l~~~p~~R~~~~~i~ 259 (264)
T cd06626 242 DRCLESDPKKRPTASELL 259 (264)
T ss_pred HHHccCCcccCCCHHHHh
Confidence 799999999999999874
No 184
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.71 E-value=7.6e-06 Score=77.29 Aligned_cols=86 Identities=20% Similarity=0.336 Sum_probs=53.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++||||||++++|+++|+.|....... ...... .....+.. ......-..+.++...|
T Consensus 164 ~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~-~~~~~~~~-~~~~~~~~~~~~~i~~~ 234 (253)
T cd05122 164 MAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM-------KALFKI-ATNGPPGL-RNPEKWSDEFKDFLKKC 234 (253)
T ss_pred cCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH-------HHHHHH-HhcCCCCc-CcccccCHHHHHHHHHH
Confidence 5678777667889999999999999999999985422100 000000 00000000 00000023455677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 235 l~~~p~~R~t~~~~l 249 (253)
T cd05122 235 LQKNPEKRPTAEQLL 249 (253)
T ss_pred ccCChhhCCCHHHHh
Confidence 999999999999874
No 185
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.70 E-value=4.7e-06 Score=87.07 Aligned_cols=84 Identities=25% Similarity=0.290 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|||||||+++|++||+.|...... ......+......+.. ... ...+.++...|
T Consensus 238 ~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-------~~~~~~~~~~~~~~~~-~~~---s~~~~~li~~~ 306 (478)
T PTZ00267 238 LAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-------REIMQQVLYGKYDPFP-CPV---SSGMKALLDPL 306 (478)
T ss_pred cCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCC-ccC---CHHHHHHHHHH
Confidence 457777777788999999999999999999999532110 0001111111111100 111 12355677889
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.+++
T Consensus 307 L~~dP~~Rps~~~~l 321 (478)
T PTZ00267 307 LSKNPALRPTTQQLL 321 (478)
T ss_pred hccChhhCcCHHHHH
Confidence 999999999998763
No 186
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=97.70 E-value=7.7e-06 Score=76.62 Aligned_cols=88 Identities=17% Similarity=0.117 Sum_probs=55.5
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
.+.||.......+.++|+|+||++++|+++|+.|..... ... ...+.+........ .........+.++...
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~------~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ 223 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD------QLL-ELFKKIGKPKPPFP-PPEWKISPEAKDLIRK 223 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------cHH-HHHHHHhccCCCCc-cccccCCHHHHHHHHH
Confidence 356777766778889999999999999999998853210 000 01111111111000 0000023456778999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||+|.||+
T Consensus 224 ~l~~~p~~Rp~~~~~~ 239 (244)
T smart00220 224 LLVKDPEKRLTAEEAL 239 (244)
T ss_pred HccCCchhccCHHHHh
Confidence 9999999999999874
No 187
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.70 E-value=9.6e-06 Score=79.61 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=29.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.......+.++|+|||||+++|++||+.|.
T Consensus 165 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~ 198 (308)
T cd06615 165 MSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPI 198 (308)
T ss_pred cChhHhcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence 4577766666788999999999999999999984
No 188
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.70 E-value=1.4e-05 Score=80.33 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=29.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|++||+.|..
T Consensus 189 ~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~ 223 (359)
T cd07876 189 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ 223 (359)
T ss_pred CCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 45777666678889999999999999999999853
No 189
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.68 E-value=6.1e-06 Score=79.67 Aligned_cols=83 Identities=24% Similarity=0.347 Sum_probs=53.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
.+||.......+.++|+||||++++|++| |+.|...... . .+.+.+......+. ...+...+.++...
T Consensus 178 ~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 246 (279)
T cd05057 178 MALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-------V-EIPDLLEKGERLPQ---PPICTIDVYMVLVK 246 (279)
T ss_pred cCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-------H-HHHHHHhCCCCCCC---CCCCCHHHHHHHHH
Confidence 45776666677889999999999999998 9998542110 0 01111111110000 11122356678899
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|+..+|.+||++.++
T Consensus 247 ~l~~~p~~Rp~~~~l 261 (279)
T cd05057 247 CWMIDAESRPTFKEL 261 (279)
T ss_pred HcCCChhhCCCHHHH
Confidence 999999999999876
No 190
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.67 E-value=1.3e-05 Score=78.25 Aligned_cols=86 Identities=16% Similarity=0.237 Sum_probs=52.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||++.|++||+.|........ ....+...... .. ......-..+.++...|
T Consensus 182 ~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~-------~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~ 252 (297)
T cd06656 182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGTP-EL-QNPERLSAVFRDFLNRC 252 (297)
T ss_pred cCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch-------heeeeccCCCC-CC-CCccccCHHHHHHHHHH
Confidence 45777766677889999999999999999999853211100 00000000000 00 00011112345677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 253 l~~~p~~Rps~~~il 267 (297)
T cd06656 253 LEMDVDRRGSAKELL 267 (297)
T ss_pred ccCChhhCcCHHHHh
Confidence 999999999999874
No 191
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.67 E-value=1e-05 Score=78.46 Aligned_cols=86 Identities=16% Similarity=0.239 Sum_probs=52.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||++.|+++|+.|........ .. . .+.....+... .....-..+.++...|
T Consensus 182 ~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~--~~-~-~~~~~~~~~~~-----~~~~~~~~l~~li~~~ 252 (285)
T cd06648 182 MAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ--AM-K-RIRDNLPPKLK-----NLHKVSPRLRSFLDRM 252 (285)
T ss_pred cCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH--HH-H-HHHhcCCCCCc-----ccccCCHHHHHHHHHH
Confidence 45676665667889999999999999999999943211000 00 0 00000001111 0001123466788899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 253 l~~~p~~Rpt~~~il 267 (285)
T cd06648 253 LVRDPAQRATAAELL 267 (285)
T ss_pred cccChhhCcCHHHHc
Confidence 999999999998874
No 192
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.67 E-value=1e-05 Score=78.07 Aligned_cols=88 Identities=14% Similarity=0.140 Sum_probs=53.3
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
...||+......+.++|||||||+++|+++|+.|........ .........+...+.... ... -.++.++.-.
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~---~~~~~~li~~ 232 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV---AKEELKRRTLEDEVKFEH-QNF---TEESKDICRL 232 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh---hHHHHHHHhhcccccccc-ccC---CHHHHHHHHH
Confidence 346787766678899999999999999999999953211100 000000111111111000 111 2235577888
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||+++|+
T Consensus 233 ~L~~~P~~R~~~~~~ 247 (277)
T cd05607 233 FLAKKPEDRLGSREK 247 (277)
T ss_pred HhccCHhhCCCCccc
Confidence 999999999999664
No 193
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.67 E-value=1.1e-05 Score=76.90 Aligned_cols=87 Identities=20% Similarity=0.321 Sum_probs=56.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCc--cccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKI--MLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
.+||-..+...+.++||||||+.++|+.+|+.|.... .....++ .+..|++..-.+.... ..-.+....--
T Consensus 244 MsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~----~~~~~~~~~Ll~~Iv~~ppP~lP~~---~fS~ef~~FV~ 316 (364)
T KOG0581|consen 244 MSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP----NPPYLDIFELLCAIVDEPPPRLPEG---EFSPEFRSFVS 316 (364)
T ss_pred cChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc----CCCCCCHHHHHHHHhcCCCCCCCcc---cCCHHHHHHHH
Confidence 5688888889999999999999999999999995421 1111111 1333444222111111 12233445567
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|++-+|.+||+..|.
T Consensus 317 ~CL~Kdp~~R~s~~qL 332 (364)
T KOG0581|consen 317 CCLRKDPSERPSAKQL 332 (364)
T ss_pred HHhcCCcccCCCHHHH
Confidence 8999999999998764
No 194
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.67 E-value=8.3e-06 Score=87.35 Aligned_cols=83 Identities=24% Similarity=0.383 Sum_probs=57.3
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCcccccccc--CCCCCCcccchHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLD--QRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~l 507 (526)
.+.||.......+.|+|||||||++.|++| |..|...+.. ...+.+.+. .++ ..+..|-.++.++
T Consensus 487 WmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-------~~~l~~~l~~G~r~-----~~P~~c~~eiY~i 554 (609)
T KOG0200|consen 487 WMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-------TEELLEFLKEGNRM-----EQPEHCSDEIYDL 554 (609)
T ss_pred ecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-------HHHHHHHHhcCCCC-----CCCCCCCHHHHHH
Confidence 456788888899999999999999999996 6666543110 000111111 122 2233456677799
Q ss_pred HHhcCCCCCCCCCCcccc
Q 009771 508 AFACLSSQPKSRPTMQRI 525 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v 525 (526)
...|.+.+|++||+..|.
T Consensus 555 M~~CW~~~p~~RP~F~~~ 572 (609)
T KOG0200|consen 555 MKSCWNADPEDRPTFSEC 572 (609)
T ss_pred HHHHhCCCcccCCCHHHH
Confidence 999999999999998764
No 195
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.67 E-value=8.6e-06 Score=77.74 Aligned_cols=83 Identities=28% Similarity=0.383 Sum_probs=52.6
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|+|||||+++|++| |+.|....... .....+......+. ......++.++...
T Consensus 170 ~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~~i~~ 238 (260)
T cd05073 170 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIRALERGYRMPR---PENCPEELYNIMMR 238 (260)
T ss_pred cCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHhCCCCCCC---cccCCHHHHHHHHH
Confidence 45777766678889999999999999999 88874321100 01111111111000 01112346677889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|+..+|++||++.+|
T Consensus 239 ~l~~~p~~Rp~~~~l 253 (260)
T cd05073 239 CWKNRPEERPTFEYI 253 (260)
T ss_pred HcccCcccCcCHHHH
Confidence 999999999999876
No 196
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.67 E-value=1.3e-05 Score=78.59 Aligned_cols=77 Identities=21% Similarity=0.336 Sum_probs=47.0
Q ss_pred ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCC
Q 009771 440 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 519 (526)
Q Consensus 440 ~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 519 (526)
...+.++|||||||+++|++||+.|........ ....+.... .+.. .....-..+..+-..|++.+|++|
T Consensus 189 ~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~-------~~~~~~~~~-~~~~--~~~~~~~~~~~li~~~l~~~p~~R 258 (307)
T cd06607 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQND-SPTL--SSNDWSDYFRNFVDSCLQKIPQDR 258 (307)
T ss_pred CCCCcccchHHHHHHHHHHHcCCCCCCCccHHH-------HHHHHhcCC-CCCC--CchhhCHHHHHHHHHHhcCChhhC
Confidence 356789999999999999999999853211000 000000000 0000 001122345666779999999999
Q ss_pred CCccccC
Q 009771 520 PTMQRIS 526 (526)
Q Consensus 520 P~m~~v~ 526 (526)
|+|.+|+
T Consensus 259 p~~~~il 265 (307)
T cd06607 259 PSSEELL 265 (307)
T ss_pred cCHHHHh
Confidence 9999874
No 197
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=97.67 E-value=8.1e-06 Score=79.47 Aligned_cols=87 Identities=17% Similarity=0.265 Sum_probs=52.4
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
...||+......+.++|||||||+++|+++|+.|........ .. ..+...+.+.+... ....+ .+..+-..
T Consensus 184 y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~--~~~~~~~~~~~~~~--~~~~~---~~~~li~~ 254 (292)
T cd06658 184 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--AM--RRIRDNLPPRVKDS--HKVSS---VLRGFLDL 254 (292)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH--HHHHhcCCCccccc--cccCH---HHHHHHHH
Confidence 345777766677889999999999999999999953211100 00 00111112221110 11112 23345567
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|.+||++.||+
T Consensus 255 ~l~~~P~~Rpt~~~il 270 (292)
T cd06658 255 MLVREPSQRATAQELL 270 (292)
T ss_pred HccCChhHCcCHHHHh
Confidence 8999999999999874
No 198
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.67 E-value=8.7e-06 Score=78.54 Aligned_cols=84 Identities=20% Similarity=0.383 Sum_probs=53.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+|||||++.|++||+.|....... .....+...-.+.. .......+.++...|
T Consensus 168 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~ 236 (277)
T cd06641 168 MAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--------KVLFLIPKNNPPTL---EGNYSKPLKEFVEAC 236 (277)
T ss_pred cChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--------HHHHHHhcCCCCCC---CcccCHHHHHHHHHH
Confidence 4577766667788999999999999999999985321110 01111111100000 011123455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||+|.|++
T Consensus 237 l~~~p~~Rp~~~~~l 251 (277)
T cd06641 237 LNKEPSFRPTAKELL 251 (277)
T ss_pred ccCChhhCcCHHHHH
Confidence 999999999999874
No 199
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.67 E-value=6.6e-06 Score=79.80 Aligned_cols=83 Identities=16% Similarity=0.147 Sum_probs=50.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|....... ...+.++..+..........--..+.++.-.|
T Consensus 168 ~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~ 239 (285)
T cd05631 168 MAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER--------VKREEVDRRVKEDQEEYSEKFSEDAKSICRML 239 (285)
T ss_pred cCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc--------hhHHHHHHHhhcccccCCccCCHHHHHHHHHH
Confidence 4577777777889999999999999999999995421110 00011111111000000001112455778899
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
++.+|++||+.
T Consensus 240 l~~~P~~R~~~ 250 (285)
T cd05631 240 LTKNPKERLGC 250 (285)
T ss_pred hhcCHHHhcCC
Confidence 99999999973
No 200
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.67 E-value=5.6e-06 Score=78.78 Aligned_cols=84 Identities=20% Similarity=0.271 Sum_probs=52.9
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|+||||++++|+++ |+.|..... ...+.+.+........ .......+.++...
T Consensus 166 ~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~ 234 (256)
T cd05039 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPHVEKGYRMEA---PEGCPPEVYKVMKD 234 (256)
T ss_pred cCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHhcCCCCCC---ccCCCHHHHHHHHH
Confidence 45777666677889999999999999997 888743210 0001111111111000 01123456678888
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||++.||+
T Consensus 235 ~l~~~p~~Rp~~~~l~ 250 (256)
T cd05039 235 CWELDPAKRPTFKQLR 250 (256)
T ss_pred HhccChhhCcCHHHHH
Confidence 9999999999999873
No 201
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=97.66 E-value=1.4e-05 Score=79.14 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=28.5
Q ss_pred CCchhccc--ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT--MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~--~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
.+||+... ...+.++|||||||+++|++||+.|..
T Consensus 175 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 211 (327)
T cd08227 175 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 211 (327)
T ss_pred cChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 45776543 346789999999999999999999954
No 202
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.66 E-value=1.3e-05 Score=77.54 Aligned_cols=95 Identities=18% Similarity=0.141 Sum_probs=51.9
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCcccccc------c--cccCCCcc-----ccccccCCCCCCccc-c
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSSL------S--SSSGPKIM-----LINVLDQRLSPPVNQ-K 496 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~~------~--~~~~~~~~-----~~~~~d~~l~~~~~~-~ 496 (526)
..||+... ...+.++|||||||+++|++||+.|....... . ........ ...+++....+.... .
T Consensus 167 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (286)
T cd07846 167 RAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIE 246 (286)
T ss_pred cCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcc
Confidence 35665542 34678899999999999999998774311100 0 00000000 000011110000000 0
Q ss_pred h-----HHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 497 I-----VQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 497 ~-----~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
. ......+.++...|+..+|++||+|.||+
T Consensus 247 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il 281 (286)
T cd07846 247 PLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLL 281 (286)
T ss_pred hHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHh
Confidence 0 01124567889999999999999999874
No 203
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.66 E-value=7e-06 Score=91.33 Aligned_cols=82 Identities=21% Similarity=0.329 Sum_probs=53.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|||||||+++||++|+.|....... ..++ .....++ ....+..++..+...|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~---------~~~~-~~~~~~~---~~~~~~~~~~~~~~~~ 248 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT---------MSSL-RHRVLPP---QILLNWPKEASFCLWL 248 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH---------HHHH-HHhhcCh---hhhhcCHHHHHHHHHh
Confidence 4578777777899999999999999999988874321100 0001 0111110 0111223345677889
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|.+||+|.||+
T Consensus 249 L~~~P~~Rps~~eil 263 (793)
T PLN00181 249 LHPEPSCRPSMSELL 263 (793)
T ss_pred CCCChhhCcChHHHh
Confidence 999999999999874
No 204
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=97.66 E-value=6.3e-06 Score=78.58 Aligned_cols=82 Identities=20% Similarity=0.318 Sum_probs=50.2
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCC-CccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHP-GELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||+... ...+.++|+|||||++.|+++|..| ....... ........+..-+ .. ...++.++..
T Consensus 171 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--------~~~~~~~~~~~~~--~~---~~~~~~~li~ 237 (258)
T cd05078 171 VPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--------KKLQFYEDRHQLP--AP---KWTELANLIN 237 (258)
T ss_pred cCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--------HHHHHHHccccCC--CC---CcHHHHHHHH
Confidence 45666654 3468899999999999999999644 2211100 0011111111101 11 1134667888
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.|++
T Consensus 238 ~~l~~~p~~Rps~~~il 254 (258)
T cd05078 238 QCMDYEPDFRPSFRAII 254 (258)
T ss_pred HHhccChhhCCCHHHHH
Confidence 99999999999999874
No 205
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.66 E-value=1.1e-05 Score=78.47 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=53.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCcccccc---------ccccCCCcccccc-ccCCCCCCcccchHHH-
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSL---------SSSSGPKIMLINV-LDQRLSPPVNQKIVQD- 500 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~---------~~~~~~~~~~~~~-~d~~l~~~~~~~~~~~- 500 (526)
..||.......+.++|||||||+++|+++|+.|....... .....+.....+. ..............+.
T Consensus 176 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (290)
T cd07862 176 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKF 255 (290)
T ss_pred cChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHH
Confidence 4577666666788999999999999999999884321100 0000000000000 0000000000000111
Q ss_pred ----HHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 501 ----IILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 501 ----~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
-..+.++...|++.+|++||++.|++
T Consensus 256 ~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 256 VTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred ccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 12345788999999999999999874
No 206
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.65 E-value=9.5e-06 Score=78.67 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=52.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+|||||+++|++||+.|........ ..+.++.++..............+.++...|
T Consensus 168 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05632 168 MAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV--------KREEVDRRVLETEEVYSAKFSEEAKSICKML 239 (285)
T ss_pred cChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHHhhhccccccCccCCHHHHHHHHHH
Confidence 45777766678889999999999999999999954211100 0011111111000000011123456778899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|++||++.|+
T Consensus 240 l~~~P~~R~~~~~~ 253 (285)
T cd05632 240 LTKDPKQRLGCQEE 253 (285)
T ss_pred ccCCHhHcCCCccc
Confidence 99999999996543
No 207
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.65 E-value=6.3e-06 Score=82.00 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=28.0
Q ss_pred CCchhccc--ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT--MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~--~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.... ...+.++|||||||++.|++||+.|.
T Consensus 173 ~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf 208 (338)
T cd07859 173 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 208 (338)
T ss_pred CCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCC
Confidence 45776543 46788999999999999999999884
No 208
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=97.65 E-value=2.2e-05 Score=77.82 Aligned_cols=35 Identities=34% Similarity=0.493 Sum_probs=27.9
Q ss_pred CCchhccc--ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT--MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~--~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||+... ...+.++|+|||||++.|+++|+.|..
T Consensus 175 ~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~ 211 (328)
T cd08226 175 LSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQ 211 (328)
T ss_pred cChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 45666543 235789999999999999999999954
No 209
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.65 E-value=7.7e-06 Score=79.83 Aligned_cols=85 Identities=16% Similarity=0.230 Sum_probs=51.5
Q ss_pred CchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcC
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACL 512 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~ 512 (526)
.||.......+.++|||||||+++|++||+.|........ ....+....... . .........+.++...|+
T Consensus 183 aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-------~~~~~~~~~~~~-~-~~~~~~~~~~~~li~~~l 253 (296)
T cd06655 183 APEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGTPE-L-QNPEKLSPIFRDFLNRCL 253 (296)
T ss_pred CcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhcCCcc-c-CCcccCCHHHHHHHHHHh
Confidence 4666666667889999999999999999999954321110 000000000000 0 000011123446678999
Q ss_pred CCCCCCCCCccccC
Q 009771 513 SSQPKSRPTMQRIS 526 (526)
Q Consensus 513 ~~~p~~RP~m~~v~ 526 (526)
..+|++||+|.+|+
T Consensus 254 ~~dp~~Rpt~~~il 267 (296)
T cd06655 254 EMDVEKRGSAKELL 267 (296)
T ss_pred hcChhhCCCHHHHh
Confidence 99999999998874
No 210
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.64 E-value=1e-05 Score=77.79 Aligned_cols=87 Identities=23% Similarity=0.444 Sum_probs=50.7
Q ss_pred Cchhcccc--cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCc-ccchHHHHHHHHHHHH
Q 009771 433 NGKLAHTM--VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV-NQKIVQDIILVSTIAF 509 (526)
Q Consensus 433 ~~~~~~~~--~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~~~~la~ 509 (526)
+||..... ..+.++||||||++++|+++|+.|........ ...+.......... .....+....+.++..
T Consensus 178 ~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 250 (272)
T cd06629 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-------AMFKLGNKRSAPPIPPDVSMNLSPVALDFLN 250 (272)
T ss_pred CHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-------HHHHhhccccCCcCCccccccCCHHHHHHHH
Confidence 46654433 36889999999999999999999953211100 00000000000000 0000111234556678
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|+..+|++||+|.||+
T Consensus 251 ~~l~~~p~~Rps~~~il 267 (272)
T cd06629 251 ACFTINPDNRPTARELL 267 (272)
T ss_pred HHhcCChhhCCCHHHHh
Confidence 99999999999999875
No 211
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.64 E-value=1.5e-05 Score=78.70 Aligned_cols=85 Identities=16% Similarity=0.228 Sum_probs=51.6
Q ss_pred CCchhc---ccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLA---HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~---~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||+. .....+.++|||||||+++|+++|+.|...... ......+......... ..+....+.++.
T Consensus 188 ~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~l~~li 257 (317)
T cd06635 188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNESPTLQ---SNEWSDYFRNFV 257 (317)
T ss_pred cChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHhccCCCCC---CccccHHHHHHH
Confidence 446654 234578899999999999999999998432110 0001111111111100 011123456777
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
-.|++.+|.+||+|.||+
T Consensus 258 ~~~l~~~p~~Rpt~~~il 275 (317)
T cd06635 258 DSCLQKIPQDRPTSEELL 275 (317)
T ss_pred HHHccCCcccCcCHHHHH
Confidence 899999999999999873
No 212
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.64 E-value=9.2e-06 Score=77.54 Aligned_cols=86 Identities=15% Similarity=0.234 Sum_probs=53.5
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
...||.......+.++||||||+++.|+++|+.|........ ....+............ .-..+..+-..
T Consensus 173 y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~li~~ 242 (263)
T cd06625 173 WMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA-------AIFKIATQPTNPQLPSH---VSPDARNFLRR 242 (263)
T ss_pred ccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH-------HHHHHhccCCCCCCCcc---CCHHHHHHHHH
Confidence 345777666678899999999999999999999953211110 00011111111101011 11234566779
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|.+||++.|++
T Consensus 243 ~l~~~p~~Rpt~~~ll 258 (263)
T cd06625 243 TFVENAKKRPSAEELL 258 (263)
T ss_pred HhhcCcccCCCHHHHh
Confidence 9999999999999874
No 213
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.62 E-value=8.2e-06 Score=78.32 Aligned_cols=81 Identities=23% Similarity=0.361 Sum_probs=50.7
Q ss_pred Cchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCcccccc-ccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINV-LDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~-~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
.||.......+.++||||||++++|+++ |+.|...... .+ ....+ -..+...+ . .....+.++...
T Consensus 176 aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~------~~-~~~~~~~~~~~~~~--~---~~~~~~~~li~~ 243 (270)
T cd05056 176 APESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN------ND-VIGRIENGERLPMP--P---NCPPTLYSLMTK 243 (270)
T ss_pred ChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH------HH-HHHHHHcCCcCCCC--C---CCCHHHHHHHHH
Confidence 4666655667889999999999999996 9988432110 00 00000 00111111 1 112345667789
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|+..+|++||++.|+
T Consensus 244 ~l~~~P~~Rpt~~~~ 258 (270)
T cd05056 244 CWAYDPSKRPRFTEL 258 (270)
T ss_pred HcCCChhhCcCHHHH
Confidence 999999999999876
No 214
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.62 E-value=0.00013 Score=72.38 Aligned_cols=77 Identities=21% Similarity=0.239 Sum_probs=47.0
Q ss_pred cCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCC
Q 009771 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (526)
+..+++++.|++++|.++ .+| .+ ..+|++|.++++.--..+|..+. ++|++|++++|.....+|. +|+
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP-~L--P~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~sLP~------sLe 115 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLP-VL--PNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEISGLPE------SVR 115 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccC-CC--CCCCcEEEccCCCCcccCCchhh--hhhhheEccCccccccccc------ccc
Confidence 334578888888888776 344 22 24688888887544345665442 5788888887732224443 466
Q ss_pred EEEccCCcC
Q 009771 177 TLSLDGNKL 185 (526)
Q Consensus 177 ~L~L~~n~l 185 (526)
.|+++.+..
T Consensus 116 ~L~L~~n~~ 124 (426)
T PRK15386 116 SLEIKGSAT 124 (426)
T ss_pred eEEeCCCCC
Confidence 666665443
No 215
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=97.61 E-value=1.3e-05 Score=76.41 Aligned_cols=84 Identities=18% Similarity=0.262 Sum_probs=52.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+||||++++|+++|+.|....... . ....+.... .+.. ....-.++.++...|
T Consensus 172 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~------~-~~~~~~~~~-~~~~---~~~~~~~~~~li~~~ 240 (260)
T cd08222 172 MSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL------S-VVLRIVEGP-TPSL---PETYSRQLNSIMQSM 240 (260)
T ss_pred cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------H-HHHHHHcCC-CCCC---cchhcHHHHHHHHHH
Confidence 4577666666778999999999999999999985321100 0 011111111 1111 111123455677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.|++
T Consensus 241 l~~~p~~Rp~~~~il 255 (260)
T cd08222 241 LNKDPSLRPSAAEIL 255 (260)
T ss_pred hcCChhhCcCHHHHh
Confidence 999999999999874
No 216
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.61 E-value=1.2e-05 Score=77.02 Aligned_cols=86 Identities=19% Similarity=0.279 Sum_probs=53.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|||||||+++|++||+.|.......... . .........+.+. ... -..+..+...|
T Consensus 175 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~-~-~~~~~~~~~~~~~----~~~---~~~~~~~i~~~ 245 (265)
T cd06631 175 MAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM-F-YIGAHRGLMPRLP----DSF---SAAAIDFVTSC 245 (265)
T ss_pred cChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH-H-HhhhccCCCCCCC----CCC---CHHHHHHHHHH
Confidence 4567766667789999999999999999999995422111000 0 0000000111111 111 22345667889
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||.
T Consensus 246 l~~~p~~Rp~~~~~l 260 (265)
T cd06631 246 LTRDQHERPSALQLL 260 (265)
T ss_pred hcCCcccCCCHHHHh
Confidence 999999999999874
No 217
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.61 E-value=1.6e-05 Score=79.84 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=29.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.......+.++|+|||||+++|+++|+.|.
T Consensus 185 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf 218 (355)
T cd07874 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218 (355)
T ss_pred cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 4577776667788999999999999999999984
No 218
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=97.61 E-value=1.2e-05 Score=77.61 Aligned_cols=95 Identities=13% Similarity=0.035 Sum_probs=52.2
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCccccc-----ccccc--CCCcccccc------ccCCCCCCcccc-
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGELLSS-----LSSSS--GPKIMLINV------LDQRLSPPVNQK- 496 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~~~~~-----~~~~~--~~~~~~~~~------~d~~l~~~~~~~- 496 (526)
..||+.. ....+.++|+|||||+++|+++|+.|...... +.... .+...+... .+..........
T Consensus 165 ~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (282)
T cd07831 165 RAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGL 244 (282)
T ss_pred CChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccH
Confidence 4566443 33467899999999999999999988432100 00000 000000000 000000000000
Q ss_pred ---hHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 497 ---IVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 497 ---~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.......+.++...|++.+|++||++.|++
T Consensus 245 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l 277 (282)
T cd07831 245 RKLLPNASAEGLDLLKKLLAYDPDERITAKQAL 277 (282)
T ss_pred HHHcccccHHHHHHHHHHhccCcccccCHHHHh
Confidence 011235677888999999999999999874
No 219
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.61 E-value=6.2e-06 Score=80.38 Aligned_cols=90 Identities=13% Similarity=0.062 Sum_probs=54.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
.+||.......+.++|||||||+++|++||+.|........ ........+.+ .++.... .....+...+.++.-.|
T Consensus 200 ~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~--~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 275 (294)
T PHA02882 200 AGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG--NLIHAAKCDFI-KRLHEGK-IKIKNANKFIYDFIECV 275 (294)
T ss_pred cCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch--HHHHHhHHHHH-HHhhhhh-hccCCCCHHHHHHHHHH
Confidence 34676666778999999999999999999999954321110 00000001111 1111100 00112234566778899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
.+.+|++||++.++
T Consensus 276 ~~~~~~~rp~~~~l 289 (294)
T PHA02882 276 TKLSYEEKPDYDAL 289 (294)
T ss_pred HhCCCCCCCCHHHH
Confidence 99999999999876
No 220
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=97.61 E-value=1.3e-05 Score=78.52 Aligned_cols=95 Identities=17% Similarity=0.019 Sum_probs=52.2
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCccccc---------ccccc----CCCcc-ccccccCCCCCCcccc
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGELLSS---------LSSSS----GPKIM-LINVLDQRLSPPVNQK 496 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~~~~~---------~~~~~----~~~~~-~~~~~d~~l~~~~~~~ 496 (526)
..||... ....+.++|||||||+++|+++|+.|...... ..... .+.+. +....+..........
T Consensus 193 ~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (311)
T cd07866 193 RPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRT 272 (311)
T ss_pred CChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCcc
Confidence 4567543 33468899999999999999999988431100 00000 00000 0000110110000000
Q ss_pred hH----HHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 497 IV----QDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 497 ~~----~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.. .....+.++...|++.+|++||++.||+
T Consensus 273 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 273 LEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred HHHHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence 00 1114567889999999999999999874
No 221
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=97.61 E-value=9.7e-06 Score=84.21 Aligned_cols=81 Identities=21% Similarity=0.348 Sum_probs=59.4
Q ss_pred chhcccccccccccccccceeeeehh-cCCCCCccccccccccCCCccccccc-cCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 434 GKLAHTMVVTEKCDVYSFGVVALEIL-MGRHPGELLSSLSSSSGPKIMLINVL-DQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 434 ~~~~~~~~~~~k~dvysfGv~llEll-tg~~P~~~~~~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
||-..-.+.|..+||||||||+.|.+ -|.+|..... . ..++..|- +-|+.+ +.+|...+.+|++.|
T Consensus 803 PEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS---N----QdVIkaIe~gyRLPp-----PmDCP~aL~qLMldC 870 (996)
T KOG0196|consen 803 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS---N----QDVIKAIEQGYRLPP-----PMDCPAALYQLMLDC 870 (996)
T ss_pred hhHhhhcccCchhhccccceEEEEecccCCCcccccc---h----HHHHHHHHhccCCCC-----CCCCcHHHHHHHHHH
Confidence 55555568899999999999999987 5999964211 1 11122221 235533 357889999999999
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
.+.+..+||++.++|
T Consensus 871 WqkdR~~RP~F~qiV 885 (996)
T KOG0196|consen 871 WQKDRNRRPKFAQIV 885 (996)
T ss_pred HHHHhhcCCCHHHHH
Confidence 999999999998875
No 222
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.59 E-value=1.5e-05 Score=76.99 Aligned_cols=77 Identities=18% Similarity=0.212 Sum_probs=46.4
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 520 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 520 (526)
..+.++|||||||+++|+++|+.|........ ... .......+.+..+ ... -.++.++...|++.+|.+||
T Consensus 184 ~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~--~~~~~~~~~~~~~--~~~---~~~~~~li~~~l~~~p~~Rp 254 (282)
T cd06643 184 PYDYKADVWSLGITLIEMAQIEPPHHELNPMR--VLL--KIAKSEPPTLAQP--SRW---SSEFKDFLKKCLEKNVDARW 254 (282)
T ss_pred CCCccchhhhHHHHHHHHccCCCCccccCHHH--HHH--HHhhcCCCCCCCc--ccc---CHHHHHHHHHHccCChhhCc
Confidence 45678999999999999999999854221100 000 0000011111111 111 12345677899999999999
Q ss_pred CccccC
Q 009771 521 TMQRIS 526 (526)
Q Consensus 521 ~m~~v~ 526 (526)
+|.+|+
T Consensus 255 ~~~~il 260 (282)
T cd06643 255 TTTQLL 260 (282)
T ss_pred CHHHHh
Confidence 998874
No 223
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.58 E-value=1.3e-05 Score=76.70 Aligned_cols=84 Identities=18% Similarity=0.266 Sum_probs=52.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+||||++++|++||+.|......... . ....+...+.+. .... ..+.++--.|
T Consensus 179 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~--~~~~~~~~~~~~----~~~~---~~~~~li~~~ 247 (267)
T cd06628 179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA--I--FKIGENASPEIP----SNIS---SEAIDFLEKT 247 (267)
T ss_pred cChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH--H--HHHhccCCCcCC----cccC---HHHHHHHHHH
Confidence 456766666678899999999999999999999543211100 0 000111111111 1112 2344556699
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|.+||++.||+
T Consensus 248 l~~~p~~Rp~~~~il 262 (267)
T cd06628 248 FEIDHNKRPTAAELL 262 (267)
T ss_pred ccCCchhCcCHHHHh
Confidence 999999999999874
No 224
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.57 E-value=2e-05 Score=75.91 Aligned_cols=84 Identities=19% Similarity=0.338 Sum_probs=51.6
Q ss_pred Cchhccc-ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 433 NGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 433 ~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
.||+... ...+.++|||||||++.|+++|+.|......... .........+.+.. . .....+.++...|
T Consensus 169 aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~----~~~~~~~~~~~~~~---~---~~~~~~~~~i~~~ 238 (277)
T cd06917 169 APEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA----MMLIPKSKPPRLED---N---GYSKLLREFVAAC 238 (277)
T ss_pred CHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh----hhccccCCCCCCCc---c---cCCHHHHHHHHHH
Confidence 4665543 3357899999999999999999999542211000 00000011111110 1 1234566778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 239 l~~~p~~R~~~~~il 253 (277)
T cd06917 239 LDEEPKERLSAEELL 253 (277)
T ss_pred cCCCcccCcCHHHHh
Confidence 999999999998873
No 225
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=97.57 E-value=2.8e-05 Score=76.76 Aligned_cols=81 Identities=22% Similarity=0.296 Sum_probs=50.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... ......+......-+ ..... .+.++--.|
T Consensus 165 ~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-------~~~~~~i~~~~~~~p--~~~~~---~~~~li~~~ 232 (318)
T cd05582 165 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-------KETMTMILKAKLGMP--QFLSP---EAQSLLRAL 232 (318)
T ss_pred cCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-------HHHHHHHHcCCCCCC--CCCCH---HHHHHHHHH
Confidence 457776666678899999999999999999999542110 000111111111100 11112 234566789
Q ss_pred CCCCCCCCCCccc
Q 009771 512 LSSQPKSRPTMQR 524 (526)
Q Consensus 512 ~~~~p~~RP~m~~ 524 (526)
++.+|++||++.+
T Consensus 233 l~~~P~~R~~a~~ 245 (318)
T cd05582 233 FKRNPANRLGAGP 245 (318)
T ss_pred hhcCHhHcCCCCC
Confidence 9999999999765
No 226
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.57 E-value=1.9e-05 Score=75.69 Aligned_cols=88 Identities=19% Similarity=0.234 Sum_probs=49.8
Q ss_pred CCchhcc---cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAH---TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~---~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||... ....+.++|+|||||+++|+++|+.|........ ............+.... . ... -..+.++.
T Consensus 173 ~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~-~-~~~---~~~~~~li 245 (267)
T cd06645 173 MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR--ALFLMTKSNFQPPKLKD-K-MKW---SNSFHHFV 245 (267)
T ss_pred cChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh--hHHhhhccCCCCCcccc-c-CCC---CHHHHHHH
Confidence 3466542 3346789999999999999999999843211100 00000000000011100 0 001 12355778
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||++.+|+
T Consensus 246 ~~~l~~~P~~R~~~~~ll 263 (267)
T cd06645 246 KMALTKNPKKRPTAEKLL 263 (267)
T ss_pred HHHccCCchhCcCHHHHh
Confidence 889999999999998874
No 227
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.57 E-value=1.4e-05 Score=80.08 Aligned_cols=76 Identities=18% Similarity=0.269 Sum_probs=44.2
Q ss_pred cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCCCc
Q 009771 443 TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTM 522 (526)
Q Consensus 443 ~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m 522 (526)
+.++|||||||+++|+++|+.|...... ..+.. ....+.. ......... .-.++.++-..|++.+|++||++
T Consensus 251 ~~~~DvwslGvil~el~~g~~pf~~~~~---~~~~~-~~~~~~~-~~~~~~~~~---~~~~l~~li~~~l~~~P~~Rpt~ 322 (353)
T PLN00034 251 GYAGDIWSLGVSILEFYLGRFPFGVGRQ---GDWAS-LMCAICM-SQPPEAPAT---ASREFRHFISCCLQREPAKRWSA 322 (353)
T ss_pred CcchhHHHHHHHHHHHHhCCCCCCCCCC---ccHHH-HHHHHhc-cCCCCCCCc---cCHHHHHHHHHHccCChhhCcCH
Confidence 4589999999999999999999541100 00000 0000000 000000011 11234566678999999999999
Q ss_pred cccC
Q 009771 523 QRIS 526 (526)
Q Consensus 523 ~~v~ 526 (526)
.||+
T Consensus 323 ~ell 326 (353)
T PLN00034 323 MQLL 326 (353)
T ss_pred HHHh
Confidence 9874
No 228
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=97.56 E-value=1.1e-05 Score=77.28 Aligned_cols=82 Identities=17% Similarity=0.225 Sum_probs=49.6
Q ss_pred CCchhcc-cccccccccccccceeeeehh-cCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEIL-MGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llEll-tg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||+.. ....+.++|||||||++.|++ +|+.|..... ... ........... . ... ..++.++..
T Consensus 175 ~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~--~~~~~~~~~~~-~-~~~---~~~~~~li~ 241 (262)
T cd05077 175 IAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT------LAE--KERFYEGQCML-V-TPS---CKELADLMT 241 (262)
T ss_pred cChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc------hhH--HHHHHhcCccC-C-CCC---hHHHHHHHH
Confidence 4567554 345788899999999999998 5777643211 000 00000111100 0 111 234567788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.|++
T Consensus 242 ~cl~~dp~~Rp~~~~il 258 (262)
T cd05077 242 HCMNYDPNQRPFFRAIM 258 (262)
T ss_pred HHcCCChhhCcCHHHHH
Confidence 99999999999999863
No 229
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.56 E-value=1e-05 Score=87.95 Aligned_cols=86 Identities=19% Similarity=0.223 Sum_probs=54.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.........++|||||||+++|++||+.|.... ........+++....++. ........+.++...|
T Consensus 547 ~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~-------~~~~~~~~il~~~~~~p~--~~~~~~~~~~~~l~~l 617 (669)
T cd05610 547 LAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDE-------TPQQVFQNILNRDIPWPE--GEEKLSVNAQNAIEIL 617 (669)
T ss_pred cCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-------CHHHHHHHHHhcCCCCCc--ccccCCHHHHHHHHHH
Confidence 4577776667889999999999999999999995321 011112223333322211 0111123345566779
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|.+||+|.||+
T Consensus 618 L~~dP~~R~ta~e~l 632 (669)
T cd05610 618 LTMDPTKRAGLKELK 632 (669)
T ss_pred cccChhHCcCHHHHH
Confidence 999999999999874
No 230
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.54 E-value=2.2e-05 Score=75.29 Aligned_cols=74 Identities=20% Similarity=0.293 Sum_probs=46.9
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccc---cCCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL---DQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
..+.++|||||||++.|++||+.|....... .....+. .+.+.. .......+.++...|++.+|+
T Consensus 194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~dp~ 261 (275)
T cd06608 194 SYDARSDVWSLGITAIELADGKPPLCDMHPM-------RALFKIPRNPPPTLKS-----PENWSKKFNDFISECLIKNYE 261 (275)
T ss_pred CccccccHHHhHHHHHHHHhCCCCccccchH-------HHHHHhhccCCCCCCc-----hhhcCHHHHHHHHHHhhcChh
Confidence 4577899999999999999999995321110 0011111 111111 111223455777899999999
Q ss_pred CCCCccccC
Q 009771 518 SRPTMQRIS 526 (526)
Q Consensus 518 ~RP~m~~v~ 526 (526)
+||++.||+
T Consensus 262 ~Rpt~~~ll 270 (275)
T cd06608 262 QRPFMEELL 270 (275)
T ss_pred hCcCHHHHh
Confidence 999999874
No 231
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.53 E-value=1.6e-05 Score=79.04 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=29.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|+++|+.|..
T Consensus 169 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 203 (333)
T cd06650 169 MSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIP 203 (333)
T ss_pred cCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 45777766677889999999999999999999953
No 232
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.53 E-value=3.1e-05 Score=74.87 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=47.3
Q ss_pred ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCC
Q 009771 440 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 519 (526)
Q Consensus 440 ~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 519 (526)
...+.++|||||||+++|++||+.|....... .....+ .....+.. .......++.++.-.|+..+|.+|
T Consensus 201 ~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~-------~~~~~~-~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~R 270 (282)
T cd06636 201 ATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM-------RALFLI-PRNPPPKL--KSKKWSKKFIDFIEGCLVKNYLSR 270 (282)
T ss_pred cCCCcccchhHHHHHHHHHHhCCCCccccCHH-------hhhhhH-hhCCCCCC--cccccCHHHHHHHHHHhCCChhhC
Confidence 35677899999999999999999985321110 001101 11100000 001112346677779999999999
Q ss_pred CCccccC
Q 009771 520 PTMQRIS 526 (526)
Q Consensus 520 P~m~~v~ 526 (526)
|++.|++
T Consensus 271 p~~~ell 277 (282)
T cd06636 271 PSTEQLL 277 (282)
T ss_pred cCHHHHh
Confidence 9998874
No 233
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.53 E-value=2.4e-05 Score=78.79 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=29.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.......+.++|||||||+++|++||+.|.
T Consensus 192 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf 225 (364)
T cd07875 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225 (364)
T ss_pred CCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCC
Confidence 4577777677888999999999999999999884
No 234
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.53 E-value=1.6e-05 Score=76.96 Aligned_cols=95 Identities=15% Similarity=0.145 Sum_probs=52.2
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCcccccc---------ccccCCCc-c-cccc-ccCCCC--CCcccc
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGELLSSL---------SSSSGPKI-M-LINV-LDQRLS--PPVNQK 496 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~~~~~~---------~~~~~~~~-~-~~~~-~d~~l~--~~~~~~ 496 (526)
..||... ....+.++||||||++++|++||+.|....... ........ . ..++ ...... ......
T Consensus 168 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (287)
T cd07840 168 RPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRR 247 (287)
T ss_pred CCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhH
Confidence 3466432 234678999999999999999999885321100 00000000 0 0000 000000 000000
Q ss_pred h---H-H-HHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 497 I---V-Q-DIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 497 ~---~-~-~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
. . . +...+.++...|+..+|++||++.||+
T Consensus 248 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 282 (287)
T cd07840 248 LREFFKHLIDPSALDLLDKLLTLDPKKRISADQAL 282 (287)
T ss_pred HHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 0 0 0 134678899999999999999999875
No 235
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.53 E-value=1.6e-05 Score=75.49 Aligned_cols=84 Identities=23% Similarity=0.318 Sum_probs=53.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||+|++++|+++|+.|..... +.............+.. . .....+.++...|
T Consensus 170 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~-~---~~~~~~~~~i~~~ 238 (258)
T cd08215 170 LSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-------LLELALKILKGQYPPIP-S---QYSSELRNLVSSL 238 (258)
T ss_pred cChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-------HHHHHHHHhcCCCCCCC-C---CCCHHHHHHHHHH
Confidence 34666656667889999999999999999999853211 00001111111111110 1 1123455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.||+
T Consensus 239 l~~~p~~Rp~~~~ll 253 (258)
T cd08215 239 LQKDPEERPSIAQIL 253 (258)
T ss_pred cCCChhhCcCHHHHh
Confidence 999999999999874
No 236
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.52 E-value=1.6e-05 Score=78.85 Aligned_cols=85 Identities=18% Similarity=0.310 Sum_probs=51.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCC-Cccc-cccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGP-KIML-INVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~-~~~~-~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||+......+.++|||||||+++|++||+.|............. ...+ ..+......-+ . ....++..+.-
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p--~---~~~~~~~~ll~ 237 (329)
T cd05618 163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--R---SLSVKAASVLK 237 (329)
T ss_pred cCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC--C---CCCHHHHHHHH
Confidence 4678777677788999999999999999999996432111000000 0001 11111111111 1 11234557778
Q ss_pred hcCCCCCCCCCC
Q 009771 510 ACLSSQPKSRPT 521 (526)
Q Consensus 510 ~C~~~~p~~RP~ 521 (526)
.|++.+|++||+
T Consensus 238 ~~L~~dP~~R~~ 249 (329)
T cd05618 238 SFLNKDPKERLG 249 (329)
T ss_pred HHhcCCHHHcCC
Confidence 999999999998
No 237
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.52 E-value=1.2e-05 Score=81.87 Aligned_cols=85 Identities=19% Similarity=0.271 Sum_probs=53.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|+++ |+.|...... .....+.+........ . ...-..+.++...
T Consensus 308 ~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~-------~~~~~~~~~~~~~~~~-p--~~~~~~l~~li~~ 377 (401)
T cd05107 308 MAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM-------NEQFYNAIKRGYRMAK-P--AHASDEIYEIMQK 377 (401)
T ss_pred eChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc-------hHHHHHHHHcCCCCCC-C--CCCCHHHHHHHHH
Confidence 34666665667889999999999999998 8888432110 0001111221111110 0 0112346677889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|.+||+|+|++
T Consensus 378 cl~~~P~~RPs~~ell 393 (401)
T cd05107 378 CWEEKFEIRPDFSQLV 393 (401)
T ss_pred HcCCChhHCcCHHHHH
Confidence 9999999999999874
No 238
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.52 E-value=1.9e-05 Score=77.14 Aligned_cols=87 Identities=18% Similarity=0.253 Sum_probs=52.6
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
...||+......+.++|||||||+++|+++|+.|........ ... .+.....+.... . .... ..+.++.-.
T Consensus 183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~--~~~~~~~~~~~~-~-~~~~---~~l~~~i~~ 253 (297)
T cd06659 183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMK--RLRDSPPPKLKN-A-HKIS---PVLRDFLER 253 (297)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH--HHhccCCCCccc-c-CCCC---HHHHHHHHH
Confidence 356787776678899999999999999999999853211000 000 000000000000 0 0111 224466778
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|.+.+|.+||++.||+
T Consensus 254 ~l~~~P~~Rps~~~ll 269 (297)
T cd06659 254 MLTREPQERATAQELL 269 (297)
T ss_pred HhcCCcccCcCHHHHh
Confidence 9999999999999874
No 239
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.52 E-value=2.2e-05 Score=78.38 Aligned_cols=85 Identities=21% Similarity=0.285 Sum_probs=52.8
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|+||||++++|+++ |..|...... .......+............ -.++.++...
T Consensus 248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 317 (343)
T cd05103 248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-------DEEFCRRLKEGTRMRAPDYT---TPEMYQTMLD 317 (343)
T ss_pred ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc-------cHHHHHHHhccCCCCCCCCC---CHHHHHHHHH
Confidence 34676666677889999999999999997 8887532110 00011111111110000111 1246788899
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 318 cl~~~p~~Rps~~eil 333 (343)
T cd05103 318 CWHGEPSQRPTFSELV 333 (343)
T ss_pred HccCChhhCcCHHHHH
Confidence 9999999999999874
No 240
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.51 E-value=5.7e-05 Score=72.80 Aligned_cols=86 Identities=15% Similarity=0.242 Sum_probs=49.1
Q ss_pred CCCchhccccccc-ccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVT-EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~-~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..+||+....... .++||||+||+++||+||++|...........+.. ... -.-|.+. ....++.. ..-.
T Consensus 187 ~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~i-g~~-~~~P~ip----~~ls~~a~---~Fl~ 257 (313)
T KOG0198|consen 187 YMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLI-GRE-DSLPEIP----DSLSDEAK---DFLR 257 (313)
T ss_pred ccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHH-hcc-CCCCCCC----cccCHHHH---HHHH
Confidence 4567777743222 48999999999999999999954310000000000 000 0112221 11122333 4456
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|...+|++|||+.+.
T Consensus 258 ~C~~~~p~~Rpta~eL 273 (313)
T KOG0198|consen 258 KCFKRDPEKRPTAEEL 273 (313)
T ss_pred HHhhcCcccCcCHHHH
Confidence 8999999999999764
No 241
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=97.51 E-value=3.6e-05 Score=74.98 Aligned_cols=85 Identities=18% Similarity=0.265 Sum_probs=51.1
Q ss_pred CchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcC
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACL 512 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~ 512 (526)
.||+......+.++|+|||||+++|+++|+.|........ .+..+....- +.. .........+..+...|+
T Consensus 183 ~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~-------~~~~~~~~~~-~~~-~~~~~~~~~l~~li~~~l 253 (293)
T cd06647 183 APEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGT-PEL-QNPEKLSAIFRDFLNRCL 253 (293)
T ss_pred CchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh-------heeehhcCCC-CCC-CCccccCHHHHHHHHHHc
Confidence 4666555567889999999999999999999954211100 0000000000 000 000111123556778999
Q ss_pred CCCCCCCCCccccC
Q 009771 513 SSQPKSRPTMQRIS 526 (526)
Q Consensus 513 ~~~p~~RP~m~~v~ 526 (526)
+.+|++||++.|++
T Consensus 254 ~~~p~~Rp~~~~il 267 (293)
T cd06647 254 EMDVEKRGSAKELL 267 (293)
T ss_pred cCChhhCcCHHHHh
Confidence 99999999998874
No 242
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=97.50 E-value=1.4e-05 Score=77.00 Aligned_cols=81 Identities=21% Similarity=0.322 Sum_probs=49.8
Q ss_pred Cchhccc-ccccccccccccceeeeeh-hcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 433 NGKLAHT-MVVTEKCDVYSFGVVALEI-LMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 433 ~~~~~~~-~~~~~k~dvysfGv~llEl-ltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
.||.... ...+.++|||||||+++|+ ++|+.|...... . .....++.....+. .. ...+.++...
T Consensus 188 aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~-~~----~~~~~~li~~ 254 (274)
T cd05076 188 APECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP-------S-EKERFYEKKHRLPE-PS----CKELATLISQ 254 (274)
T ss_pred CchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh-------H-HHHHHHHhccCCCC-CC----ChHHHHHHHH
Confidence 4564432 4568899999999999998 478887432110 0 01111111111010 11 1246678889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.+|+
T Consensus 255 cl~~~p~~Rps~~~il 270 (274)
T cd05076 255 CLTYEPTQRPSFRTIL 270 (274)
T ss_pred HcccChhhCcCHHHHH
Confidence 9999999999999874
No 243
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=97.49 E-value=4.1e-05 Score=74.05 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=26.4
Q ss_pred CCchhccccc-ccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMV-VTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~-~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.....+ .+.++|||||||+++|++||+.|.
T Consensus 167 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~ 201 (284)
T cd07860 167 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 201 (284)
T ss_pred cCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 4466544333 478899999999999999999884
No 244
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.49 E-value=2.6e-05 Score=75.85 Aligned_cols=74 Identities=19% Similarity=0.312 Sum_probs=46.2
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccc---cCCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL---DQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
..+.++|||||||+++|++||+.|....... ....... .+.... .......+.++...|+..+|+
T Consensus 191 ~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~ 258 (292)
T cd06644 191 PYDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLKIAKSEPPTLSQ-----PSKWSMEFRDFLKTALDKHPE 258 (292)
T ss_pred CCCchhhhHhHHHHHHHHhcCCCCCccccHH-------HHHHHHhcCCCccCCC-----CcccCHHHHHHHHHHhcCCcc
Confidence 3567899999999999999999985321110 0011110 111110 011123455677889999999
Q ss_pred CCCCccccC
Q 009771 518 SRPTMQRIS 526 (526)
Q Consensus 518 ~RP~m~~v~ 526 (526)
+||++.||+
T Consensus 259 ~Rp~~~~il 267 (292)
T cd06644 259 TRPSAAQLL 267 (292)
T ss_pred cCcCHHHHh
Confidence 999999874
No 245
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.49 E-value=2.8e-05 Score=83.42 Aligned_cols=135 Identities=24% Similarity=0.332 Sum_probs=71.9
Q ss_pred CCCCEEeCCCCC-CCCCCchhcc-CCCCCCEEEccCccCCcc-CCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCE
Q 009771 101 PNLQYLDLGSNN-LSGSIPSQID-SLSNLTYIYLYENNLTGT-IPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLET 177 (526)
Q Consensus 101 ~~L~~L~l~~n~-~~~~~p~~l~-~l~~L~~L~Ls~n~~~~~-ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 177 (526)
.+|++|++++.. +....|..++ -+|+|+.|.+++-.+... .-....++++|..||+|+++++.. ..++++++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 356677776642 2333444444 367777777766555322 112234567777777777766532 45666677777
Q ss_pred EEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcC--ch----hhcCcCccCcccccccccCCC
Q 009771 178 LSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTI--PK----EIGSLRNLKELDLSSNKLGGV 243 (526)
Q Consensus 178 L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~--p~----~l~~l~~L~~L~l~~n~l~~~ 243 (526)
|.+.+=.+.... --..+.++++|+.||+|........ .. .-..+|+|+.||.+++.+++.
T Consensus 200 L~mrnLe~e~~~------~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 200 LSMRNLEFESYQ------DLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred HhccCCCCCchh------hHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 766655443210 0013446677777777665433221 11 112356666666666655543
No 246
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.49 E-value=3.1e-05 Score=75.00 Aligned_cols=77 Identities=23% Similarity=0.324 Sum_probs=46.9
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 520 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 520 (526)
..+.++|||||||++.|++||+.|......... ... ......+.+..+ .. .-..+..+...|++.+|++||
T Consensus 205 ~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~--~~~--~~~~~~~~~~~~--~~---~~~~~~~li~~~l~~~p~~Rp 275 (286)
T cd06638 205 TYDARCDVWSLGITAIELGDGDPPLADLHPMRA--LFK--IPRNPPPTLHQP--EL---WSNEFNDFIRKCLTKDYEKRP 275 (286)
T ss_pred cccchhhhhhHHHHHHHHhcCCCCCCCCchhHH--Hhh--ccccCCCcccCC--CC---cCHHHHHHHHHHccCCcccCC
Confidence 467899999999999999999999543211100 000 000000111000 00 112355778899999999999
Q ss_pred CccccC
Q 009771 521 TMQRIS 526 (526)
Q Consensus 521 ~m~~v~ 526 (526)
+|.||+
T Consensus 276 s~~ell 281 (286)
T cd06638 276 TVSDLL 281 (286)
T ss_pred CHHHHh
Confidence 999874
No 247
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.48 E-value=3.5e-05 Score=78.60 Aligned_cols=80 Identities=24% Similarity=0.329 Sum_probs=52.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCc-ccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV-NQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~~~~la~~ 510 (526)
..||.......++.||+||+||+|.||++|+.|...- |.. . .+-.++..+. .....++.+ .+--.
T Consensus 480 ~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~--------P~~--~-ei~~~i~~~~~s~~vS~~AK---dLl~~ 545 (612)
T KOG0603|consen 480 VAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAH--------PAG--I-EIHTRIQMPKFSECVSDEAK---DLLQQ 545 (612)
T ss_pred cChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccC--------Cch--H-HHHHhhcCCccccccCHHHH---HHHHH
Confidence 4578888888999999999999999999999995421 111 0 1111221110 011112333 34446
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|.+||+|.++
T Consensus 546 LL~~dP~~Rl~~~~i 560 (612)
T KOG0603|consen 546 LLQVDPALRLGADEI 560 (612)
T ss_pred hccCChhhCcChhhh
Confidence 789999999999986
No 248
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.48 E-value=1.6e-05 Score=76.83 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=26.4
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||+... ...+.++|+||||++++|++||+.|.
T Consensus 166 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf 200 (283)
T cd07835 166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLF 200 (283)
T ss_pred CCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCC
Confidence 34665433 23578899999999999999999884
No 249
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.48 E-value=2.6e-05 Score=75.64 Aligned_cols=34 Identities=12% Similarity=0.116 Sum_probs=29.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.......+.++|+|||||++.|+++|+.|.
T Consensus 174 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f 207 (288)
T cd07863 174 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 207 (288)
T ss_pred cCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCc
Confidence 4577776667889999999999999999999874
No 250
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.48 E-value=2.7e-05 Score=77.93 Aligned_cols=79 Identities=19% Similarity=0.363 Sum_probs=53.6
Q ss_pred cccccccccccccceeeeehhcCCCCCcccc-ccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 439 TMVVTEKCDVYSFGVVALEILMGRHPGELLS-SLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 439 ~~~~~~k~dvysfGv~llElltg~~P~~~~~-~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
..++..++||||.||++.+|+-||.|...+. .|. .+..+.||...-+. ... -+-.++++++-.|++.+|.
T Consensus 546 k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a-------Kl~aI~~P~~~Ief-p~~-~~~~~li~~mK~CL~rdPk 616 (677)
T KOG0596|consen 546 KIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA-------KLHAITDPNHEIEF-PDI-PENDELIDVMKCCLARDPK 616 (677)
T ss_pred ceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH-------HHHhhcCCCccccc-cCC-CCchHHHHHHHHHHhcCcc
Confidence 4568899999999999999999999955433 222 13345555332111 000 0111267889999999999
Q ss_pred CCCCccccC
Q 009771 518 SRPTMQRIS 526 (526)
Q Consensus 518 ~RP~m~~v~ 526 (526)
+||+..|++
T Consensus 617 kR~si~eLL 625 (677)
T KOG0596|consen 617 KRWSIPELL 625 (677)
T ss_pred cCCCcHHHh
Confidence 999998764
No 251
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.47 E-value=2.3e-05 Score=75.78 Aligned_cols=85 Identities=15% Similarity=0.158 Sum_probs=51.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|......... .......+...... .....-..+.++...|
T Consensus 164 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~ 235 (280)
T cd05608 164 MAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE---NKELKQRILNDSVT-----YPDKFSPASKSFCEAL 235 (280)
T ss_pred cCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh---HHHHHHhhcccCCC-----CcccCCHHHHHHHHHH
Confidence 467877777788899999999999999999999542111100 00001111111111 0011123355677889
Q ss_pred CCCCCCCCCCccc
Q 009771 512 LSSQPKSRPTMQR 524 (526)
Q Consensus 512 ~~~~p~~RP~m~~ 524 (526)
++.+|++||+..+
T Consensus 236 l~~~P~~R~~~~~ 248 (280)
T cd05608 236 LAKDPEKRLGFRD 248 (280)
T ss_pred hcCCHHHhcCCCC
Confidence 9999999995543
No 252
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.46 E-value=3.2e-05 Score=74.88 Aligned_cols=77 Identities=23% Similarity=0.271 Sum_probs=46.5
Q ss_pred ccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCCC
Q 009771 442 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 521 (526)
Q Consensus 442 ~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 521 (526)
.+.++|+|||||++.|++||+.|...... . .. ...+..+.+.... ....+.-..+..+...|++.+|++||+
T Consensus 184 ~~~~~DiwslG~il~~l~~g~~pf~~~~~-~--~~-~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~ 255 (286)
T cd06622 184 YTVQSDVWSLGLSILEMALGRYPYPPETY-A--NI-FAQLSAIVDGDPP----TLPSGYSDDAQDFVAKCLNKIPNRRPT 255 (286)
T ss_pred CCcccchHhHHHHHHHHHhCCCCCCCcch-h--hH-HHHHHHHhhcCCC----CCCcccCHHHHHHHHHHcccCcccCCC
Confidence 47899999999999999999999532110 0 00 0001111221110 001112234556778899999999999
Q ss_pred ccccC
Q 009771 522 MQRIS 526 (526)
Q Consensus 522 m~~v~ 526 (526)
+.|++
T Consensus 256 ~~~l~ 260 (286)
T cd06622 256 YAQLL 260 (286)
T ss_pred HHHHh
Confidence 98863
No 253
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.46 E-value=4.7e-05 Score=73.79 Aligned_cols=35 Identities=17% Similarity=0.110 Sum_probs=29.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|+|||||++.|+++|+.|..
T Consensus 168 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~ 202 (287)
T cd07848 168 RSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFP 202 (287)
T ss_pred CCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCC
Confidence 45777766677889999999999999999998853
No 254
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=97.45 E-value=2.4e-05 Score=74.55 Aligned_cols=85 Identities=20% Similarity=0.192 Sum_probs=51.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|..... .......+.......+. ......-..+.++...|
T Consensus 160 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~ 231 (260)
T cd05611 160 LAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET-------PDAVFDNILSRRINWPE-EVKEFCSPEAVDLINRL 231 (260)
T ss_pred cChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHhcccCCCC-cccccCCHHHHHHHHHH
Confidence 35666555557889999999999999999999953210 00001111111111100 01111234567888999
Q ss_pred CCCCCCCCCCccc
Q 009771 512 LSSQPKSRPTMQR 524 (526)
Q Consensus 512 ~~~~p~~RP~m~~ 524 (526)
++.+|++||++.+
T Consensus 232 l~~~p~~R~~~~~ 244 (260)
T cd05611 232 LCMDPAKRLGANG 244 (260)
T ss_pred ccCCHHHccCCCc
Confidence 9999999998753
No 255
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.45 E-value=2.1e-05 Score=74.44 Aligned_cols=83 Identities=18% Similarity=0.360 Sum_probs=52.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCc-cccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKI-MLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||+......+.++|||++|++++|+++|+.|....... ... .......+... ... ...+.++...
T Consensus 166 ~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~----~~~---~~~~~~~i~~ 233 (254)
T cd06627 166 MAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM-----AALFRIVQDDHPPLP----EGI---SPELKDFLMQ 233 (254)
T ss_pred cCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHHhccCCCCCC----CCC---CHHHHHHHHH
Confidence 4577666666788999999999999999999985321110 000 00000001111 111 2234567789
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|+..+|++||+|.|++
T Consensus 234 ~l~~~p~~R~~~~~~l 249 (254)
T cd06627 234 CFQKDPNLRPTAKQLL 249 (254)
T ss_pred HHhCChhhCcCHHHHh
Confidence 9999999999999874
No 256
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=97.45 E-value=7.2e-05 Score=73.56 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=27.5
Q ss_pred CCchhccc--ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT--MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~--~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|+|||||+++|+++|+.|..
T Consensus 175 ~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~ 211 (314)
T cd08216 175 LSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFK 211 (314)
T ss_pred cCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 45665433 246788999999999999999999954
No 257
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=97.45 E-value=3.5e-05 Score=75.62 Aligned_cols=85 Identities=16% Similarity=0.225 Sum_probs=51.0
Q ss_pred CCchhcc---cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAH---TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~---~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||... ....+.++|||||||++.|++||+.|....... .....+......... ....-..+.++.
T Consensus 178 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~~li 247 (308)
T cd06634 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNESPALQ---SGHWSEYFRNFV 247 (308)
T ss_pred cCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-------HHHHHHhhcCCCCcC---cccccHHHHHHH
Confidence 3466542 235678999999999999999999984321110 000011111110000 011223455677
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
-.|++.+|++||++.+|+
T Consensus 248 ~~cl~~~P~~Rp~~~~ll 265 (308)
T cd06634 248 DSCLQKIPQDRPTSEVLL 265 (308)
T ss_pred HHHhhCCcccCCCHHHHh
Confidence 899999999999998874
No 258
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.44 E-value=2.8e-05 Score=76.50 Aligned_cols=79 Identities=23% Similarity=0.249 Sum_probs=48.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||++.|++||+.|...... .. ....++.....-+ ..... .+.++...|
T Consensus 160 ~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~------~~-~~~~~~~~~~~~~--~~~~~---~~~~li~~~ 227 (312)
T cd05585 160 LAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV------NE-MYRKILQEPLRFP--DGFDR---DAKDLLIGL 227 (312)
T ss_pred CCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH------HH-HHHHHHcCCCCCC--CcCCH---HHHHHHHHH
Confidence 457777666788999999999999999999999532100 00 0111111111100 11112 234566789
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
++.+|++||+.
T Consensus 228 L~~dp~~R~~~ 238 (312)
T cd05585 228 LSRDPTRRLGY 238 (312)
T ss_pred cCCCHHHcCCC
Confidence 99999999865
No 259
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.44 E-value=2.1e-05 Score=74.68 Aligned_cols=83 Identities=24% Similarity=0.410 Sum_probs=51.9
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|+||+|+++.|+++ |+.|...... . ...+.+........... ....+.++...
T Consensus 171 ~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~~---~~~~~~~~i~~ 239 (258)
T smart00219 171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-------E-EVLEYLKKGYRLPKPEN---CPPEIYKLMLQ 239 (258)
T ss_pred cChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-------H-HHHHHHhcCCCCCCCCc---CCHHHHHHHHH
Confidence 45776666678899999999999999998 6666432100 0 01111111100000011 22346678899
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|+..+|++||++.|+
T Consensus 240 ~l~~~p~~Rpt~~~l 254 (258)
T smart00219 240 CWAEDPEDRPTFSEL 254 (258)
T ss_pred HCcCChhhCcCHHHH
Confidence 999999999999886
No 260
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.43 E-value=7.1e-05 Score=68.44 Aligned_cols=63 Identities=27% Similarity=0.440 Sum_probs=32.6
Q ss_pred cCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCC--CCCCCCccccCCCCCCCEEEccCCcCC
Q 009771 122 DSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSN--NLNGTIPIEIGSVRNLETLSLDGNKLS 186 (526)
Q Consensus 122 ~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n--~l~~~~p~~l~~l~~L~~L~L~~n~l~ 186 (526)
..+..|+.|.+.+..++.. ..|..+++|++|+++.| ++++.++.....+++|+++++++|++.
T Consensus 40 d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 40 DEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred ccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 3344455555544444321 23445566666666666 444444444444566666666666554
No 261
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=97.43 E-value=5.3e-05 Score=68.53 Aligned_cols=77 Identities=21% Similarity=0.465 Sum_probs=51.4
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 520 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 520 (526)
..++|.||||+||++.++.-|..|.+...+ +... ....+....+..+......+. +.++--.|.+.+|.+||
T Consensus 217 ti~ertDIWSLGCtLYa~mf~~sPfe~~~~--~GgS---laLAv~n~q~s~P~~~~yse~---l~~lik~mlqvdP~qRP 288 (302)
T KOG2345|consen 217 TITERTDIWSLGCTLYAMMFGESPFERIYQ--QGGS---LALAVQNAQISIPNSSRYSEA---LHQLIKSMLQVDPNQRP 288 (302)
T ss_pred ccccccchhhhhHHHHHHHHcCCcchHHhh--cCCe---EEEeeeccccccCCCCCccHH---HHHHHHHHhcCCcccCC
Confidence 578999999999999999999999764332 1111 122233434433322223333 44666789999999999
Q ss_pred Ccccc
Q 009771 521 TMQRI 525 (526)
Q Consensus 521 ~m~~v 525 (526)
+..|+
T Consensus 289 ~i~~l 293 (302)
T KOG2345|consen 289 TIPEL 293 (302)
T ss_pred CHHHH
Confidence 98875
No 262
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.43 E-value=3.7e-05 Score=73.00 Aligned_cols=83 Identities=19% Similarity=0.365 Sum_probs=49.7
Q ss_pred Cchhccccc-ccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc-CCCCCCcccchHHHHHHHHHHHHh
Q 009771 433 NGKLAHTMV-VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD-QRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 433 ~~~~~~~~~-~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
.||+..... .+.++|+|||||++.|+++|+.|....... .....+.. .... ....... ..+.++...
T Consensus 169 ~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~-~~~~~~~---~~~~~li~~ 237 (258)
T cd06632 169 APEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV-------AAVFKIGRSKELP-PIPDHLS---DEAKDFILK 237 (258)
T ss_pred CHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH-------HHHHHHHhcccCC-CcCCCcC---HHHHHHHHH
Confidence 466554444 788999999999999999999995422110 00000101 0000 0001111 223456678
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||+|.|++
T Consensus 238 ~l~~~p~~Rp~~~~~l 253 (258)
T cd06632 238 CLQRDPSLRPTAAELL 253 (258)
T ss_pred HhhcCcccCcCHHHHh
Confidence 9999999999999874
No 263
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.41 E-value=4.1e-05 Score=74.04 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=27.3
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||+... ...+.++|+|||||+++|++||+.|.
T Consensus 167 ~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~ 201 (286)
T cd07847 167 RAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLW 201 (286)
T ss_pred CCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCC
Confidence 45676543 45678999999999999999999884
No 264
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.41 E-value=3e-05 Score=75.38 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=27.1
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|||||||+++|++||+.|..
T Consensus 170 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~ 205 (291)
T cd07870 170 RPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP 205 (291)
T ss_pred cCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 34665432 245778999999999999999999854
No 265
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=97.40 E-value=4.6e-05 Score=74.99 Aligned_cols=85 Identities=16% Similarity=0.243 Sum_probs=49.5
Q ss_pred CCchhcc---cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAH---TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~---~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||+.. ....+.++|||||||+++|+++|+.|........ ....+............. ...+.++.
T Consensus 184 ~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~l~~li 253 (313)
T cd06633 184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNDSPTLQSNEW---TDSFRGFV 253 (313)
T ss_pred cChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHHhcCCCCCCcccc---CHHHHHHH
Confidence 3456542 2346778999999999999999999943211000 000000000000000111 12345677
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|.+||+|.|++
T Consensus 254 ~~~l~~~P~~Rp~~~~~l 271 (313)
T cd06633 254 DYCLQKIPQERPASAELL 271 (313)
T ss_pred HHHccCChhhCcCHHHHh
Confidence 799999999999999874
No 266
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.40 E-value=4.5e-05 Score=73.61 Aligned_cols=95 Identities=14% Similarity=0.108 Sum_probs=52.7
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCCcccccc---------ccccCCCc--cccccccC---CCCCCccc-
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGELLSSL---------SSSSGPKI--MLINVLDQ---RLSPPVNQ- 495 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~~~~~~---------~~~~~~~~--~~~~~~d~---~l~~~~~~- 495 (526)
..||..... ..+.++|+||||++++|++||+.|....... .....+.. ...+.... ........
T Consensus 165 ~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (283)
T cd05118 165 RAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMP 244 (283)
T ss_pred cCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccC
Confidence 346655444 5788999999999999999999874311100 00000000 00000000 00000000
Q ss_pred ---chHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 496 ---KIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 496 ---~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.....-.++.++...|++.+|.+||+|.|++
T Consensus 245 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll 278 (283)
T cd05118 245 LPKLFPNASPQALDLLSQMLHYDPHKRITAEQAL 278 (283)
T ss_pred HHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHh
Confidence 0011234577889999999999999999874
No 267
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=97.40 E-value=3.2e-05 Score=75.34 Aligned_cols=86 Identities=16% Similarity=0.278 Sum_probs=51.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+|||||++.|+++|+.|....... .....+.....+.. ......-..+.++-..|
T Consensus 183 ~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~ 253 (292)
T cd06657 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDNLPPKL-KNLHKVSPSLKGFLDRL 253 (292)
T ss_pred cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhhCCccc-CCcccCCHHHHHHHHHH
Confidence 4577666667788999999999999999999984321100 00001111111000 00001112344556789
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|.+||++.||+
T Consensus 254 l~~~P~~R~~~~~ll 268 (292)
T cd06657 254 LVRDPAQRATAAELL 268 (292)
T ss_pred HhCCcccCcCHHHHh
Confidence 999999999998874
No 268
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=97.40 E-value=4.5e-05 Score=72.53 Aligned_cols=82 Identities=23% Similarity=0.265 Sum_probs=51.2
Q ss_pred CCchhcccc--cccccccccccceeeeehhcC-CCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTM--VVTEKCDVYSFGVVALEILMG-RHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~--~~~~k~dvysfGv~llElltg-~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||+.... ..+.++|+|||||+++|+++| ..|..... . ........+....+. .. ...+.++.
T Consensus 171 ~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-~------~~~~~~~~~~~~~~~--~~----~~~~~~li 237 (259)
T cd05037 171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-S------SEKERFYQDQHRLPM--PD----CAELANLI 237 (259)
T ss_pred cChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-c------hhHHHHHhcCCCCCC--CC----chHHHHHH
Confidence 457765544 678899999999999999995 55532211 0 000000011111110 01 15667888
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|+..+|++||+|.||+
T Consensus 238 ~~~l~~~p~~Rpt~~~il 255 (259)
T cd05037 238 NQCWTYDPTKRPSFRAIL 255 (259)
T ss_pred HHHhccChhhCCCHHHHH
Confidence 999999999999999874
No 269
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.40 E-value=3.5e-05 Score=76.38 Aligned_cols=87 Identities=17% Similarity=0.318 Sum_probs=51.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|||||||++.|++||+.|......-......+.....+......-+ ... -.++.++...|
T Consensus 163 ~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~---~~~~~~li~~~ 237 (327)
T cd05617 163 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP--RFL---SVKASHVLKGF 237 (327)
T ss_pred CCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC--CCC---CHHHHHHHHHH
Confidence 4678777677888999999999999999999996432111000000000111111111111 111 12344677889
Q ss_pred CCCCCCCCCCcc
Q 009771 512 LSSQPKSRPTMQ 523 (526)
Q Consensus 512 ~~~~p~~RP~m~ 523 (526)
++.+|++||++.
T Consensus 238 L~~dP~~R~~~~ 249 (327)
T cd05617 238 LNKDPKERLGCQ 249 (327)
T ss_pred hccCHHHcCCCC
Confidence 999999999864
No 270
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=97.38 E-value=5.9e-06 Score=78.66 Aligned_cols=90 Identities=21% Similarity=0.326 Sum_probs=55.4
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||... ....+.++||||+|++++|+++|+.|........ ................. ....+....+.++-..
T Consensus 165 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~ 239 (260)
T PF00069_consen 165 MAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD----QLEIIEKILKRPLPSSS-QQSREKSEELRDLIKK 239 (260)
T ss_dssp SCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH----HHHHHHHHHHTHHHHHT-TSHTTSHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccchh----hhhhhhhcccccccccc-cccchhHHHHHHHHHH
Confidence 4577776 7788999999999999999999999855320000 00001111111110000 0000112567788889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.|++
T Consensus 240 ~l~~~p~~R~~~~~l~ 255 (260)
T PF00069_consen 240 MLSKDPEQRPSAEELL 255 (260)
T ss_dssp HSSSSGGGSTTHHHHH
T ss_pred HccCChhHCcCHHHHh
Confidence 9999999999999863
No 271
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.38 E-value=4.5e-05 Score=73.73 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=26.8
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.... ...+.++||||||+++.|++||+.|.
T Consensus 168 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~ 202 (285)
T cd07861 168 RAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLF 202 (285)
T ss_pred cChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCC
Confidence 45675432 34578899999999999999999884
No 272
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.37 E-value=3.7e-05 Score=76.06 Aligned_cols=81 Identities=17% Similarity=0.218 Sum_probs=50.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||+++|++||+.|..... .......+.......+ ... -..+.++...|
T Consensus 168 ~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~-------~~~~~~~i~~~~~~~p--~~~---~~~~~~li~~~ 235 (324)
T cd05589 168 LAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD-------EEEVFDSIVNDEVRYP--RFL---SREAISIMRRL 235 (324)
T ss_pred cCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCC--CCC---CHHHHHHHHHH
Confidence 45777766677889999999999999999999953210 0000111111111111 111 12345677789
Q ss_pred CCCCCCCCCCccc
Q 009771 512 LSSQPKSRPTMQR 524 (526)
Q Consensus 512 ~~~~p~~RP~m~~ 524 (526)
++.+|.+||++++
T Consensus 236 L~~dP~~R~~~~~ 248 (324)
T cd05589 236 LRRNPERRLGSGE 248 (324)
T ss_pred hhcCHhHcCCCCC
Confidence 9999999997654
No 273
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.37 E-value=3.5e-05 Score=74.87 Aligned_cols=35 Identities=14% Similarity=0.141 Sum_probs=27.5
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||...+ ...+.++|||||||+++|+++|+.|..
T Consensus 170 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~ 205 (291)
T cd07844 170 RPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFP 205 (291)
T ss_pred CCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 44665433 346789999999999999999998853
No 274
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.37 E-value=3.3e-05 Score=74.09 Aligned_cols=78 Identities=23% Similarity=0.329 Sum_probs=42.3
Q ss_pred cccccccccccceeeeehhc-CCCCCccccccccccC-CCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSG-PKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKS 518 (526)
Q Consensus 441 ~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 518 (526)
..+.++|+||||++++|+++ |+.|......-..... .........++.+. ....+.+..+ .-.|. .+|++
T Consensus 185 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l---~~~c~-~~P~~ 256 (269)
T cd05087 185 DQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLK----LPLSDRWYEV---MQFCW-LQPEQ 256 (269)
T ss_pred CCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccC----CCCChHHHHH---HHHHh-cCccc
Confidence 35779999999999999996 9988542211000000 00000011111111 1112334433 34576 57999
Q ss_pred CCCccccC
Q 009771 519 RPTMQRIS 526 (526)
Q Consensus 519 RP~m~~v~ 526 (526)
||+|.||+
T Consensus 257 Rpt~~~l~ 264 (269)
T cd05087 257 RPSAEEVH 264 (269)
T ss_pred CCCHHHHH
Confidence 99999974
No 275
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=97.36 E-value=4.8e-05 Score=73.33 Aligned_cols=95 Identities=9% Similarity=0.037 Sum_probs=52.3
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCCcccc---------ccccccCCCcc--cccc--ccCCCCCCcccch
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGELLS---------SLSSSSGPKIM--LINV--LDQRLSPPVNQKI 497 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~~~~---------~~~~~~~~~~~--~~~~--~d~~l~~~~~~~~ 497 (526)
..||..... ..+.++|||||||+++|+++|+.|..... ..........+ ..+. .+...........
T Consensus 165 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (282)
T cd07829 165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDL 244 (282)
T ss_pred CChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccch
Confidence 446655444 67788999999999999999987742110 00000000000 0000 0111100000000
Q ss_pred ----HHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 498 ----VQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 498 ----~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
..--..+.++...|++.+|++||++.||+
T Consensus 245 ~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 277 (282)
T cd07829 245 EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEAL 277 (282)
T ss_pred HHhcccccHHHHHHHHHhhccCcccCCCHHHHh
Confidence 00123577889999999999999999874
No 276
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.36 E-value=4e-05 Score=75.47 Aligned_cols=80 Identities=15% Similarity=0.175 Sum_probs=52.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||||++++|+++|+.|..... ......++.+.....+... .....+.++.-.|
T Consensus 199 ~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~ 268 (316)
T cd05574 199 IAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN-------RDETFSNILKKEVTFPGSP---PVSSSARDLIRKL 268 (316)
T ss_pred cCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc-------hHHHHHHHhcCCccCCCcc---ccCHHHHHHHHHH
Confidence 45777777778899999999999999999999953211 0111222222222211101 1234566778899
Q ss_pred CCCCCCCCCC
Q 009771 512 LSSQPKSRPT 521 (526)
Q Consensus 512 ~~~~p~~RP~ 521 (526)
++.+|++||+
T Consensus 269 l~~~p~~R~s 278 (316)
T cd05574 269 LVKDPSKRLG 278 (316)
T ss_pred ccCCHhHCCC
Confidence 9999999999
No 277
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.36 E-value=5.5e-05 Score=74.85 Aligned_cols=81 Identities=19% Similarity=0.160 Sum_probs=50.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|+++|+.|...... ......+....+... ... -..+.++-..|
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-------~~~~~~~~~~~~~~~--~~~---~~~~~~ll~~l 230 (325)
T cd05604 163 LAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-------AEMYDNILHKPLVLR--PGA---SLTAWSILEEL 230 (325)
T ss_pred CCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-------HHHHHHHHcCCccCC--CCC---CHHHHHHHHHH
Confidence 457777767778899999999999999999999532100 000111111111100 111 12344667789
Q ss_pred CCCCCCCCCCccc
Q 009771 512 LSSQPKSRPTMQR 524 (526)
Q Consensus 512 ~~~~p~~RP~m~~ 524 (526)
++.+|.+||++++
T Consensus 231 l~~~p~~R~~~~~ 243 (325)
T cd05604 231 LEKDRQRRLGAKE 243 (325)
T ss_pred hccCHHhcCCCCC
Confidence 9999999998863
No 278
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.36 E-value=6.1e-05 Score=80.89 Aligned_cols=133 Identities=20% Similarity=0.280 Sum_probs=92.6
Q ss_pred CCCCCCEEeCCCCCCCC-CCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCC-CCccccCCCCCCC
Q 009771 99 CFPNLQYLDLGSNNLSG-SIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNG-TIPIEIGSVRNLE 176 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~-~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~ 176 (526)
-||.|+.|.+++-.+.. .......++++|+.||+|+.+++.. ..++++++|++|.+.+=.+.. ..-..+.+|++|+
T Consensus 146 ~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~ 223 (699)
T KOG3665|consen 146 MLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLR 223 (699)
T ss_pred hCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCC
Confidence 48999999999877643 3445567899999999999998844 668899999999998876653 2234678899999
Q ss_pred EEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhc-CcCccCccc
Q 009771 177 TLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIG-SLRNLKELD 234 (526)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~-~l~~L~~L~ 234 (526)
.||+|........ ......-+.-..+++|+.||.+++.+.+.+-+.+- .-++|+.+.
T Consensus 224 vLDIS~~~~~~~~-~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i~ 281 (699)
T KOG3665|consen 224 VLDISRDKNNDDT-KIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQIA 281 (699)
T ss_pred eeeccccccccch-HHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhhh
Confidence 9999987655332 10101111123588999999999888766544332 234444444
No 279
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.33 E-value=3.7e-05 Score=76.30 Aligned_cols=86 Identities=16% Similarity=0.331 Sum_probs=51.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccc--cccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLS--SSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~--~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|+|||||++.|++||+.|.+...... .....+.....+......-+ ... ..++.++..
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~---~~~~~~li~ 237 (329)
T cd05588 163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP--RSL---SVKASSVLK 237 (329)
T ss_pred cCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC--CCC---CHHHHHHHH
Confidence 46787777777889999999999999999999965321110 00000101111222222111 111 123456778
Q ss_pred hcCCCCCCCCCCc
Q 009771 510 ACLSSQPKSRPTM 522 (526)
Q Consensus 510 ~C~~~~p~~RP~m 522 (526)
.|++.+|.+||+.
T Consensus 238 ~~L~~dP~~R~~~ 250 (329)
T cd05588 238 GFLNKDPKERLGC 250 (329)
T ss_pred HHhccCHHHcCCC
Confidence 8999999999973
No 280
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.33 E-value=4.6e-05 Score=73.51 Aligned_cols=75 Identities=24% Similarity=0.407 Sum_probs=46.3
Q ss_pred ccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc---CCCCCCcccchHHHHHHHHHHHHhcCCCCC
Q 009771 440 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIAFACLSSQP 516 (526)
Q Consensus 440 ~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~la~~C~~~~p 516 (526)
...+.++|+||||++++|+++|+.|....... .....+.. +.+..+ .. ....+.++...|+..+|
T Consensus 183 ~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~--~~---~~~~~~~li~~~l~~~p 250 (280)
T cd06611 183 NPYDYKADIWSLGITLIELAQMEPPHHELNPM-------RVLLKILKSEPPTLDQP--SK---WSSSFNDFLKSCLVKDP 250 (280)
T ss_pred CCCCccccHHHHHHHHHHHHhCCCCcccCCHH-------HHHHHHhcCCCCCcCCc--cc---CCHHHHHHHHHHhccCh
Confidence 34577899999999999999999995422110 00111110 111110 11 11234566778999999
Q ss_pred CCCCCccccC
Q 009771 517 KSRPTMQRIS 526 (526)
Q Consensus 517 ~~RP~m~~v~ 526 (526)
++||++.+|+
T Consensus 251 ~~Rps~~~il 260 (280)
T cd06611 251 DDRPTAAELL 260 (280)
T ss_pred hhCcCHHHHh
Confidence 9999999874
No 281
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=97.32 E-value=8.3e-05 Score=71.11 Aligned_cols=88 Identities=17% Similarity=0.309 Sum_probs=52.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||+|++++|+++|+.|....... . ....+..+......+ ......-.++.++...|
T Consensus 175 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~ 247 (268)
T cd06630 175 MAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS---N-HLALIFKIASATTAP---SIPEHLSPGLRDVTLRC 247 (268)
T ss_pred eCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc---c-hHHHHHHHhccCCCC---CCchhhCHHHHHHHHHH
Confidence 3466655556678999999999999999999985321100 0 000011110001111 11111123456788999
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.|++
T Consensus 248 l~~~p~~R~~~~~ll 262 (268)
T cd06630 248 LELQPEDRPPSRELL 262 (268)
T ss_pred cCCCcccCcCHHHHh
Confidence 999999999998874
No 282
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=97.32 E-value=4.6e-05 Score=75.72 Aligned_cols=89 Identities=11% Similarity=0.128 Sum_probs=51.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCc-ccccccc-CCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKI-MLINVLD-QRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~-~~~~~~d-~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||+......+.++|||||||+++|+++|+.|....... ...... .....+. +...... ....++ +.++-.
T Consensus 165 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~-~~~s~~---~~~li~ 238 (333)
T cd05600 165 MAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN--ETWENLKYWKETLQRPVYDDPR-FNLSDE---AWDLIT 238 (333)
T ss_pred cChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH--HHHHHHHhccccccCCCCCccc-cccCHH---HHHHHH
Confidence 4578777677889999999999999999999995421100 000000 0000000 1000000 011123 344556
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|+..+|.+||++.||+
T Consensus 239 ~~l~~~~~rr~s~~~ll 255 (333)
T cd05600 239 KLINDPSRRFGSLEDIK 255 (333)
T ss_pred HHhhChhhhcCCHHHHH
Confidence 78889999999998863
No 283
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.32 E-value=3.9e-05 Score=75.60 Aligned_cols=80 Identities=20% Similarity=0.292 Sum_probs=49.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|+++|+.|...... ......+......-+ ..... .+.++.-.|
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~~~~~~--~~~~~---~~~~ll~~~ 230 (316)
T cd05592 163 IAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-------DELFDSILNDRPHFP--RWISK---EAKDCLSKL 230 (316)
T ss_pred cCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCCCC--CCCCH---HHHHHHHHH
Confidence 457777666788999999999999999999999532110 000111111110000 11112 234566799
Q ss_pred CCCCCCCCCCcc
Q 009771 512 LSSQPKSRPTMQ 523 (526)
Q Consensus 512 ~~~~p~~RP~m~ 523 (526)
++.+|++||++.
T Consensus 231 l~~~P~~R~~~~ 242 (316)
T cd05592 231 FERDPTKRLGVD 242 (316)
T ss_pred ccCCHHHcCCCh
Confidence 999999999875
No 284
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=97.32 E-value=8.2e-05 Score=74.58 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=29.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.......+.++|||||||+++|+++|+.|.
T Consensus 184 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf 217 (353)
T cd07850 184 RAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLF 217 (353)
T ss_pred cCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCC
Confidence 4577776667889999999999999999999884
No 285
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.31 E-value=4.6e-05 Score=74.62 Aligned_cols=84 Identities=14% Similarity=0.142 Sum_probs=50.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||+......+.++|+||||++++|++||+.|..... +......+.......+.... ..-..+.++.-.|
T Consensus 183 ~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~ 253 (305)
T cd05609 183 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT-------PEELFGQVISDDIEWPEGDE--ALPADAQDLISRL 253 (305)
T ss_pred cCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhcccCCCCccc--cCCHHHHHHHHHH
Confidence 34666555667889999999999999999999843110 00001111111111000000 1123356888999
Q ss_pred CCCCCCCCCCccc
Q 009771 512 LSSQPKSRPTMQR 524 (526)
Q Consensus 512 ~~~~p~~RP~m~~ 524 (526)
++.+|++||++.+
T Consensus 254 l~~~P~~R~~~~~ 266 (305)
T cd05609 254 LRQNPLERLGTGG 266 (305)
T ss_pred hccChhhccCccC
Confidence 9999999998643
No 286
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.30 E-value=6.3e-05 Score=74.37 Aligned_cols=80 Identities=19% Similarity=0.185 Sum_probs=49.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... ......++....... ..... .+.++--.|
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~~~~~--~~~~~---~~~~li~~~ 230 (323)
T cd05575 163 LAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-------AEMYDNILNKPLRLK--PNISV---SARHLLEGL 230 (323)
T ss_pred cChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-------HHHHHHHHcCCCCCC--CCCCH---HHHHHHHHH
Confidence 457776666778899999999999999999999532100 000111111111100 11112 234566689
Q ss_pred CCCCCCCCCCcc
Q 009771 512 LSSQPKSRPTMQ 523 (526)
Q Consensus 512 ~~~~p~~RP~m~ 523 (526)
++.+|.+||++.
T Consensus 231 l~~~p~~R~~~~ 242 (323)
T cd05575 231 LQKDRTKRLGAK 242 (323)
T ss_pred hhcCHHhCCCCC
Confidence 999999999985
No 287
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=97.30 E-value=5.3e-05 Score=74.94 Aligned_cols=79 Identities=16% Similarity=0.258 Sum_probs=51.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||+++|++||+.|...... ......+.+.....+. .. -.++..+...|
T Consensus 168 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~-------~~~~~~i~~~~~~~p~-~~----s~~~~~li~~~ 235 (323)
T cd05616 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIMEHNVAYPK-SM----SKEAVAICKGL 235 (323)
T ss_pred cCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCC-cC----CHHHHHHHHHH
Confidence 457877777788999999999999999999999542110 0011112222221111 11 12345778899
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
++.+|++||+.
T Consensus 236 l~~~p~~R~~~ 246 (323)
T cd05616 236 MTKHPGKRLGC 246 (323)
T ss_pred cccCHHhcCCC
Confidence 99999999985
No 288
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.29 E-value=4.7e-05 Score=72.52 Aligned_cols=83 Identities=17% Similarity=0.220 Sum_probs=51.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|..... +......+.......+.... -...+..+...|
T Consensus 168 ~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~ 237 (265)
T cd05579 168 IAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-------PEEIFQNILNGKIEWPEDVE---VSDEAIDLISKL 237 (265)
T ss_pred cCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHhcCCcCCCcccc---CCHHHHHHHHHH
Confidence 45776666667889999999999999999999853211 11001111111111111000 124456777889
Q ss_pred CCCCCCCCCCccc
Q 009771 512 LSSQPKSRPTMQR 524 (526)
Q Consensus 512 ~~~~p~~RP~m~~ 524 (526)
++.+|++||++.+
T Consensus 238 l~~~p~~Rpt~~~ 250 (265)
T cd05579 238 LVPDPEKRLGAKS 250 (265)
T ss_pred hcCCHhhcCCCcc
Confidence 9999999999943
No 289
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.28 E-value=9.5e-05 Score=73.95 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=30.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|++||+.|..
T Consensus 197 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~ 231 (350)
T cd05573 197 IAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY 231 (350)
T ss_pred cCHHHHcCCCCCCceeeEecchhhhhhccCCCCCC
Confidence 45777776778899999999999999999999954
No 290
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.28 E-value=4e-05 Score=75.58 Aligned_cols=79 Identities=18% Similarity=0.260 Sum_probs=50.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||+++|++||+.|...... ......+.......+ ... -..+.++.-.|
T Consensus 163 ~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-------~~~~~~i~~~~~~~~--~~~---~~~~~~li~~~ 230 (318)
T cd05570 163 IAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-------DELFQSILEDEVRYP--RWL---SKEAKSILKSF 230 (318)
T ss_pred cCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-------HHHHHHHHcCCCCCC--CcC---CHHHHHHHHHH
Confidence 457777767788999999999999999999999542110 000111111111100 111 12345677799
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
+..+|.+||++
T Consensus 231 l~~dP~~R~s~ 241 (318)
T cd05570 231 LTKNPEKRLGC 241 (318)
T ss_pred ccCCHHHcCCC
Confidence 99999999998
No 291
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.28 E-value=9.4e-05 Score=71.44 Aligned_cols=74 Identities=24% Similarity=0.373 Sum_probs=46.4
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc---CCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
..+.++|+||||++++|+++|+.|...... .. .....++. +.+.. .... ..+.++...|.+.+|+
T Consensus 183 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~--~~~~~~~~~~~~~~~~---~~~~---~~l~~li~~~l~~~p~ 250 (283)
T cd06617 183 GYDVKSDVWSLGITMIELATGRFPYDSWKT----PF--QQLKQVVEEPSPQLPA---EKFS---PEFQDFVNKCLKKNYK 250 (283)
T ss_pred ccCccccchhhHHHHHHHHhCCCCCCcccc----CH--HHHHHHHhcCCCCCCc---cccC---HHHHHHHHHHccCChh
Confidence 347789999999999999999999542110 00 00111111 11110 1111 2355677789999999
Q ss_pred CCCCccccC
Q 009771 518 SRPTMQRIS 526 (526)
Q Consensus 518 ~RP~m~~v~ 526 (526)
+||++.||+
T Consensus 251 ~Rp~~~~il 259 (283)
T cd06617 251 ERPNYPELL 259 (283)
T ss_pred hCcCHHHHh
Confidence 999998874
No 292
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.28 E-value=4.5e-05 Score=75.42 Aligned_cols=77 Identities=18% Similarity=0.233 Sum_probs=48.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||++.|++||+.|...... ......+......-+ ... -..+.++...|
T Consensus 167 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-------~~~~~~~~~~~~~~~--~~~---~~~~~~li~~~ 234 (323)
T cd05584 167 MAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-------KKTIDKILKGKLNLP--PYL---TPEARDLLKKL 234 (323)
T ss_pred cChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCCCC--CCC---CHHHHHHHHHH
Confidence 457776666678899999999999999999999532110 001112222221111 111 12345677889
Q ss_pred CCCCCCCCC
Q 009771 512 LSSQPKSRP 520 (526)
Q Consensus 512 ~~~~p~~RP 520 (526)
++.+|++||
T Consensus 235 l~~~p~~R~ 243 (323)
T cd05584 235 LKRNPSSRL 243 (323)
T ss_pred cccCHhHcC
Confidence 999999999
No 293
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.28 E-value=9.6e-05 Score=71.90 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=27.3
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||+... ...+.++|||||||+++|++||+.|.
T Consensus 170 ~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf 204 (294)
T PLN00009 170 RAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLF 204 (294)
T ss_pred cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 45776543 34678999999999999999999884
No 294
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=97.27 E-value=4e-05 Score=76.25 Aligned_cols=94 Identities=18% Similarity=0.146 Sum_probs=51.0
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCccccccc------cc-cCCC-cc--------ccccccCCCCCCcc
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLS------SS-SGPK-IM--------LINVLDQRLSPPVN 494 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~------~~-~~~~-~~--------~~~~~d~~l~~~~~ 494 (526)
..||... ....+.++||||||++++|++||+.|........ .. ..+. .. ..+.++ .+.....
T Consensus 179 ~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 257 (337)
T cd07852 179 RAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLD-SLPSRPR 257 (337)
T ss_pred cCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhh-hcccccc
Confidence 3455432 2346788999999999999999998843211000 00 0000 00 000111 0000000
Q ss_pred cchH----HHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 495 QKIV----QDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 495 ~~~~----~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.... ..-..+.++...|++.+|++||+|.||+
T Consensus 258 ~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il 293 (337)
T cd07852 258 KPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEAL 293 (337)
T ss_pred cchhhhccCCCHHHHHHHHHhccCCcccccCHHHHh
Confidence 0000 0123567889999999999999999874
No 295
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.27 E-value=0.00046 Score=60.69 Aligned_cols=57 Identities=28% Similarity=0.348 Sum_probs=23.4
Q ss_pred CCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCC
Q 009771 103 LQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNL 161 (526)
Q Consensus 103 L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l 161 (526)
...+||++|.+... ..|..++.|.+|.|.+|.++..-|.--.-+++|..|.|.+|++
T Consensus 44 ~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi 100 (233)
T KOG1644|consen 44 FDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSI 100 (233)
T ss_pred cceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcch
Confidence 33444444444211 2233444444444444444433222222334444444444444
No 296
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.27 E-value=5.5e-05 Score=73.14 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=24.4
Q ss_pred Cchhcccc-cccccccccccceeeeehhcCCCC
Q 009771 433 NGKLAHTM-VVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 433 ~~~~~~~~-~~~~k~dvysfGv~llElltg~~P 464 (526)
.||..... ..+.++||||+|+++.|++||+.|
T Consensus 168 aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~ 200 (286)
T cd07832 168 APELLYGARKYDPGVDLWAVGCIFAELLNGSPL 200 (286)
T ss_pred CceeeeccccCCchhHHHHHHHHHHHHHcCCcC
Confidence 35544322 347889999999999999999665
No 297
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=97.25 E-value=4.4e-05 Score=73.80 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=26.8
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||...+. ..+.++|||||||+++|++||+.|.
T Consensus 166 ~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~ 200 (284)
T cd07839 166 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 200 (284)
T ss_pred cChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 456754432 3578899999999999999999983
No 298
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.25 E-value=6.5e-05 Score=74.29 Aligned_cols=77 Identities=19% Similarity=0.289 Sum_probs=47.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... ......+......-+ ....++ +.++--.|
T Consensus 162 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~~~~~~~~~~~~p--~~~~~~---~~~li~~~ 229 (323)
T cd05571 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEEIRFP--RTLSPE---AKSLLAGL 229 (323)
T ss_pred cChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-------HHHHHHHHcCCCCCC--CCCCHH---HHHHHHHH
Confidence 457777666778999999999999999999999532100 000011111111101 111122 34566689
Q ss_pred CCCCCCCCC
Q 009771 512 LSSQPKSRP 520 (526)
Q Consensus 512 ~~~~p~~RP 520 (526)
++.+|++||
T Consensus 230 L~~dP~~R~ 238 (323)
T cd05571 230 LKKDPKQRL 238 (323)
T ss_pred ccCCHHHcC
Confidence 999999999
No 299
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.24 E-value=5.2e-05 Score=73.51 Aligned_cols=83 Identities=12% Similarity=0.082 Sum_probs=49.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||++.|+++|+.|........ ....+...+..... ......-..+.++...|
T Consensus 168 ~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~ 239 (285)
T cd05605 168 MAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV----KREEVERRVKEDQE----EYSEKFSEAARSICRQL 239 (285)
T ss_pred cCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh----HHHHHHHHhhhccc----ccCcccCHHHHHHHHHH
Confidence 45777666677889999999999999999999954211100 00001111111110 00011123456788999
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
+..+|.+||++
T Consensus 240 l~~~P~~R~~~ 250 (285)
T cd05605 240 LTKDPGFRLGC 250 (285)
T ss_pred ccCCHHHhcCC
Confidence 99999999944
No 300
>PTZ00284 protein kinase; Provisional
Probab=97.23 E-value=7.9e-05 Score=77.74 Aligned_cols=35 Identities=14% Similarity=0.222 Sum_probs=30.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|++||+.|.+
T Consensus 312 ~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 312 RSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred cCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 45787777778899999999999999999999954
No 301
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.23 E-value=5.9e-05 Score=73.12 Aligned_cols=86 Identities=17% Similarity=0.207 Sum_probs=49.7
Q ss_pred CCchhccccc--ccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMV--VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~--~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||...... .+.++||||||+++.|++||+.|........ .... ....+..... +.. .. .-..+.++..
T Consensus 173 ~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~-~~~~~~~~~~-~~~-~~---~~~~l~~li~ 244 (288)
T cd05583 173 MAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSE-ISRRILKSKP-PFP-KT---MSAEARDFIQ 244 (288)
T ss_pred cCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHH-HHHHHHccCC-CCC-cc---cCHHHHHHHH
Confidence 3566654433 6789999999999999999999943211000 0000 0011111111 000 11 1123456677
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|++.+|++||++++|
T Consensus 245 ~~l~~~p~~R~t~~~~ 260 (288)
T cd05583 245 KLLEKDPKKRLGANGA 260 (288)
T ss_pred HHhcCCHhhccCcchH
Confidence 8999999999998876
No 302
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=97.22 E-value=0.00015 Score=70.93 Aligned_cols=34 Identities=12% Similarity=-0.000 Sum_probs=26.6
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||+.... ..+.++|+||||+++.|++||+.|.
T Consensus 190 ~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 190 RPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred cCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCC
Confidence 456755332 3577899999999999999999874
No 303
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=97.22 E-value=0.00014 Score=69.41 Aligned_cols=84 Identities=15% Similarity=0.105 Sum_probs=51.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||||++++|+++|+.|...... .+......+.+....... ....-.++.++...|
T Consensus 159 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~ 230 (262)
T cd05572 159 VAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-----DPMEIYNDILKGNGKLEF---PNYIDKAAKDLIKQL 230 (262)
T ss_pred cChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-----CHHHHHHHHhccCCCCCC---CcccCHHHHHHHHHH
Confidence 457766666678899999999999999999999542210 000011122211111100 111134566788899
Q ss_pred CCCCCCCCCCcc
Q 009771 512 LSSQPKSRPTMQ 523 (526)
Q Consensus 512 ~~~~p~~RP~m~ 523 (526)
++.+|++||+|.
T Consensus 231 l~~~p~~R~~~~ 242 (262)
T cd05572 231 LRRNPEERLGNL 242 (262)
T ss_pred ccCChhhCcCCc
Confidence 999999999954
No 304
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=97.22 E-value=9.3e-05 Score=72.82 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=27.3
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.... ...+.++|||||||+++|++||+.|.
T Consensus 182 ~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred cCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 45665543 34688899999999999999999884
No 305
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=97.21 E-value=5.8e-05 Score=74.56 Aligned_cols=78 Identities=17% Similarity=0.278 Sum_probs=48.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... ......+.......+ ..... ++.++--.|
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-------~~~~~~i~~~~~~~p--~~~~~---~~~~ll~~~ 230 (321)
T cd05591 163 IAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-------DDLFESILHDDVLYP--VWLSK---EAVSILKAF 230 (321)
T ss_pred cCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-------HHHHHHHHcCCCCCC--CCCCH---HHHHHHHHH
Confidence 457877767788999999999999999999999542110 000111111111100 01112 344566789
Q ss_pred CCCCCCCCCC
Q 009771 512 LSSQPKSRPT 521 (526)
Q Consensus 512 ~~~~p~~RP~ 521 (526)
++.+|++||+
T Consensus 231 L~~dp~~R~~ 240 (321)
T cd05591 231 MTKNPNKRLG 240 (321)
T ss_pred hccCHHHcCC
Confidence 9999999994
No 306
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.21 E-value=9.9e-05 Score=75.01 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=28.0
Q ss_pred CchhcccccccccccccccceeeeehhcCCCC
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
.||+......+.++|+|||||+++|++||+.|
T Consensus 251 aPE~~~~~~~~~~~DiwSlGvil~elltg~~p 282 (391)
T PHA03212 251 APELLARDPYGPAVDIWSAGIVLFEMATCHDS 282 (391)
T ss_pred ChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 57776666778899999999999999999987
No 307
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.21 E-value=5.7e-05 Score=72.65 Aligned_cols=85 Identities=26% Similarity=0.354 Sum_probs=52.5
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|+++ |..|...... ......+......... .......+.++...
T Consensus 185 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~l~~~i~~ 254 (275)
T cd05046 185 LAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-------EEVLNRLQAGKLELPV---PEGCPSRLYKLMTR 254 (275)
T ss_pred cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch-------HHHHHHHHcCCcCCCC---CCCCCHHHHHHHHH
Confidence 44676666667889999999999999998 6666422110 0001111111111110 01122356788999
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.|++
T Consensus 255 ~l~~~p~~Rp~~~~~l 270 (275)
T cd05046 255 CWAVNPKDRPSFSELV 270 (275)
T ss_pred HcCCCcccCCCHHHHH
Confidence 9999999999998863
No 308
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=97.20 E-value=6.9e-05 Score=73.64 Aligned_cols=35 Identities=17% Similarity=0.122 Sum_probs=27.5
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|||||||+++|+++|+.|..
T Consensus 182 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 217 (316)
T cd07842 182 RAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFK 217 (316)
T ss_pred cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Confidence 45675543 346788999999999999999998843
No 309
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.18 E-value=0.00013 Score=72.27 Aligned_cols=27 Identities=37% Similarity=0.662 Sum_probs=23.7
Q ss_pred ccccccccccccceeeeehhcCCCCCc
Q 009771 440 MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 440 ~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
...+.++|||||||+++|++||+.|..
T Consensus 184 ~~~~~~~DiwslG~il~el~~g~~Pf~ 210 (330)
T cd05601 184 GTYGVECDWWSLGVIAYEMIYGRSPFH 210 (330)
T ss_pred CCCCCcceeecccceeeeeccCCCCCC
Confidence 356789999999999999999999953
No 310
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.17 E-value=8.3e-05 Score=72.32 Aligned_cols=34 Identities=12% Similarity=0.064 Sum_probs=27.0
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||+... ...+.++|+|||||+++|++||+.|.
T Consensus 178 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~ 212 (295)
T cd07837 178 RAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLF 212 (295)
T ss_pred CChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCC
Confidence 34665532 34688999999999999999999884
No 311
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.16 E-value=0.00011 Score=72.46 Aligned_cols=80 Identities=19% Similarity=0.223 Sum_probs=50.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|+++|+.|...... ......+....+..+. . .-..+.++-..|
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~~~~-~----~~~~~~~li~~~ 230 (321)
T cd05603 163 LAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-------SQMYDNILHKPLQLPG-G----KTVAACDLLVGL 230 (321)
T ss_pred CCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-------HHHHHHHhcCCCCCCC-C----CCHHHHHHHHHH
Confidence 457776666778899999999999999999999532100 0001111111111111 1 122355778889
Q ss_pred CCCCCCCCCCcc
Q 009771 512 LSSQPKSRPTMQ 523 (526)
Q Consensus 512 ~~~~p~~RP~m~ 523 (526)
++.+|.+||+..
T Consensus 231 l~~~p~~R~~~~ 242 (321)
T cd05603 231 LHKDQRRRLGAK 242 (321)
T ss_pred ccCCHhhcCCCC
Confidence 999999999753
No 312
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.16 E-value=7.6e-05 Score=73.56 Aligned_cols=78 Identities=15% Similarity=0.253 Sum_probs=49.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCcccccc--ccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINV--LDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|||||||+++|++||+.|...... ......+ ..+... ..... .+.++-.
T Consensus 163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-------~~~~~~i~~~~~~~~----~~~~~---~~~~li~ 228 (316)
T cd05619 163 IAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE-------EELFQSIRMDNPCYP----RWLTR---EAKDILV 228 (316)
T ss_pred cCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCC----ccCCH---HHHHHHH
Confidence 457777666788999999999999999999999532110 0000001 011111 11112 2345667
Q ss_pred hcCCCCCCCCCCcc
Q 009771 510 ACLSSQPKSRPTMQ 523 (526)
Q Consensus 510 ~C~~~~p~~RP~m~ 523 (526)
.|++.+|++||++.
T Consensus 229 ~~l~~~P~~R~~~~ 242 (316)
T cd05619 229 KLFVREPERRLGVK 242 (316)
T ss_pred HHhccCHhhcCCCh
Confidence 89999999999986
No 313
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.16 E-value=0.00012 Score=69.68 Aligned_cols=85 Identities=15% Similarity=0.057 Sum_probs=53.7
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc-CCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD-QRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
.+.||.......+.++|+||||+++.|+++|+.|......- ..+. ...... .... ........+.++.-
T Consensus 165 y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~i~ 234 (258)
T cd05578 165 YMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT----IRDQ-IRAKQETADVL-----YPATWSTEAIDAIN 234 (258)
T ss_pred hcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc----HHHH-HHHHhcccccc-----CcccCcHHHHHHHH
Confidence 35678777777899999999999999999999995432110 0010 111111 1110 00111234556778
Q ss_pred hcCCCCCCCCCCc--ccc
Q 009771 510 ACLSSQPKSRPTM--QRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m--~~v 525 (526)
.|+..+|.+||+. +|+
T Consensus 235 ~~l~~~p~~R~~~~~~~l 252 (258)
T cd05578 235 KLLERDPQKRLGDNLKDL 252 (258)
T ss_pred HHccCChhHcCCccHHHH
Confidence 8999999999998 665
No 314
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=97.15 E-value=7.6e-05 Score=73.72 Aligned_cols=79 Identities=20% Similarity=0.294 Sum_probs=49.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||++.|++||+.|...... ......+.......+ ....+ .+.++.-.|
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~~~--~~~~~---~~~~li~~~ 230 (320)
T cd05590 163 IAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-------DDLFEAILNDEVVYP--TWLSQ---DAVDILKAF 230 (320)
T ss_pred cCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHhcCCCCCC--CCCCH---HHHHHHHHH
Confidence 457877777778899999999999999999999542110 000111111111111 11112 234566789
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
++.+|++||+.
T Consensus 231 L~~dP~~R~~~ 241 (320)
T cd05590 231 MTKNPTMRLGS 241 (320)
T ss_pred cccCHHHCCCC
Confidence 99999999997
No 315
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.14 E-value=0.00013 Score=69.74 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=29.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|+++|+.|..
T Consensus 176 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 210 (265)
T cd06652 176 MSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWA 210 (265)
T ss_pred cChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCC
Confidence 45676655667889999999999999999999953
No 316
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.13 E-value=4.9e-05 Score=75.61 Aligned_cols=94 Identities=15% Similarity=0.070 Sum_probs=52.3
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCccccc---------cccccCCCccccccccCCCC------CCccc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSS---------LSSSSGPKIMLINVLDQRLS------PPVNQ 495 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~---------~~~~~~~~~~~~~~~d~~l~------~~~~~ 495 (526)
..||.... ...+.++|||||||+++|++||+.|...-.. ......++ ....+.+.... +....
T Consensus 176 ~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 254 (336)
T cd07849 176 RAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE-DLNCIISLRARNYIKSLPFKPK 254 (336)
T ss_pred cChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH-HHHHhhchhhhhHHhhcCcCCc
Confidence 34675432 3467899999999999999999988532100 00000000 01111111100 00000
Q ss_pred chH-----HHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 496 KIV-----QDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 496 ~~~-----~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
... ..-.++..+...|++.+|++||+|.|++
T Consensus 255 ~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l 290 (336)
T cd07849 255 VPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEAL 290 (336)
T ss_pred ccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHh
Confidence 000 1123467889999999999999999874
No 317
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.13 E-value=0.00011 Score=71.59 Aligned_cols=95 Identities=16% Similarity=0.071 Sum_probs=50.5
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCccccccc---------cccCCCcc--ccccccCC---CCCCc--c
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSSLS---------SSSGPKIM--LINVLDQR---LSPPV--N 494 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~~~---------~~~~~~~~--~~~~~d~~---l~~~~--~ 494 (526)
..||.... ...+.++|||||||+++|+++|+.|......+. ........ .....+.. ..+.. .
T Consensus 169 ~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (298)
T cd07841 169 RAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLK 248 (298)
T ss_pred eCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchh
Confidence 34565432 345788999999999999999965532111000 00000000 00000000 00000 0
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 495 QKIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 495 ~~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
......-.++.++...|++.+|++||+|.||+
T Consensus 249 ~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l 280 (298)
T cd07841 249 QIFPAASDDALDLLQRLLTLNPNKRITARQAL 280 (298)
T ss_pred hhcccccHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 00011124567889999999999999999985
No 318
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=97.11 E-value=8.4e-05 Score=74.14 Aligned_cols=35 Identities=20% Similarity=0.329 Sum_probs=27.5
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|||||||+++|+++|+.|..
T Consensus 181 ~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~ 216 (342)
T cd07879 181 RAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK 216 (342)
T ss_pred cChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence 34665433 356789999999999999999999843
No 319
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.10 E-value=0.00012 Score=72.50 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=30.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|+|||||+++|++||+.|..
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~ 197 (325)
T cd05594 163 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 197 (325)
T ss_pred CCHHHHccCCCCCccccccccceeeeeccCCCCCC
Confidence 46787776778899999999999999999999953
No 320
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=97.10 E-value=9.7e-05 Score=73.07 Aligned_cols=79 Identities=18% Similarity=0.304 Sum_probs=49.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||+++|++||+.|...... ......+......-+ .... .++.++...|
T Consensus 168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-------~~~~~~i~~~~~~~~--~~~~---~~~~~li~~~ 235 (324)
T cd05587 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-------DELFQSIMEHNVSYP--KSLS---KEAVSICKGL 235 (324)
T ss_pred cChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCCCC--CCCC---HHHHHHHHHH
Confidence 457777666678899999999999999999999542110 000111111111111 1111 2345667789
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
+..+|.+||+.
T Consensus 236 l~~~P~~R~~~ 246 (324)
T cd05587 236 LTKHPAKRLGC 246 (324)
T ss_pred hhcCHHHcCCC
Confidence 99999999986
No 321
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.10 E-value=0.00012 Score=73.99 Aligned_cols=35 Identities=20% Similarity=0.162 Sum_probs=27.8
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|||||||+++|+++|+.|..
T Consensus 171 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 206 (372)
T cd07853 171 RAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQ 206 (372)
T ss_pred CCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence 45676544 335788999999999999999999853
No 322
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.10 E-value=7.6e-05 Score=72.57 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=48.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... ......+.......+ ..... .+.++--.|
T Consensus 165 ~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~~~~~--~~~~~---~~~~li~~~ 232 (291)
T cd05612 165 LAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-------FGIYEKILAGKLEFP--RHLDL---YAKDLIKKL 232 (291)
T ss_pred cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCcCCC--ccCCH---HHHHHHHHH
Confidence 457777666778899999999999999999999532110 000111211111111 11111 344677889
Q ss_pred CCCCCCCCCC
Q 009771 512 LSSQPKSRPT 521 (526)
Q Consensus 512 ~~~~p~~RP~ 521 (526)
++.+|.+||+
T Consensus 233 l~~dp~~R~~ 242 (291)
T cd05612 233 LVVDRTRRLG 242 (291)
T ss_pred cCCCHHHccC
Confidence 9999999995
No 323
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.09 E-value=0.00017 Score=74.69 Aligned_cols=33 Identities=18% Similarity=0.176 Sum_probs=28.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
..||+......+.++|||||||+++|+++|+.|
T Consensus 329 ~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~ 361 (461)
T PHA03211 329 NAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTAS 361 (461)
T ss_pred cCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 457877777788999999999999999998876
No 324
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=97.09 E-value=7.2e-05 Score=71.72 Aligned_cols=25 Identities=28% Similarity=0.502 Sum_probs=21.6
Q ss_pred cccccccccccceeeeehhc-CCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILM-GRHPG 465 (526)
Q Consensus 441 ~~~~k~dvysfGv~llEllt-g~~P~ 465 (526)
..+.++|||||||+++|+++ |+.|.
T Consensus 185 ~~~~~~DiwslG~~l~el~~~~~~p~ 210 (269)
T cd05042 185 DQTKKSNIWSLGVTMWELFTAADQPY 210 (269)
T ss_pred ccchhhHHHHHHHHHHHHHhCCCCCC
Confidence 56789999999999999999 66674
No 325
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.08 E-value=0.00012 Score=72.69 Aligned_cols=82 Identities=17% Similarity=0.201 Sum_probs=47.4
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCCccccccccccCCCcccccc--ccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINV--LDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||..... ..+.++|||||||+++|++||+.|....... .........+ .++.+. ..... .+.++.
T Consensus 173 ~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~---~~~~li 242 (332)
T cd05614 173 MAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER---NTQSEVSRRILKCDPPFP----SFIGP---EAQDLL 242 (332)
T ss_pred cCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC---CCHHHHHHHHhcCCCCCC----CCCCH---HHHHHH
Confidence 457765543 3578899999999999999999995421110 0000000011 111111 11112 234567
Q ss_pred HhcCCCCCCCCCCcc
Q 009771 509 FACLSSQPKSRPTMQ 523 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~ 523 (526)
..|++.+|++||+..
T Consensus 243 ~~~l~~dp~~R~~~~ 257 (332)
T cd05614 243 HKLLRKDPKKRLGAG 257 (332)
T ss_pred HHHcCCCHHHcCCCC
Confidence 799999999999543
No 326
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=97.08 E-value=0.00011 Score=72.94 Aligned_cols=95 Identities=14% Similarity=0.059 Sum_probs=51.2
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCCccccc---------ccccc----CCCccc---cccccCCCCCCcc
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGELLSS---------LSSSS----GPKIML---INVLDQRLSPPVN 494 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~~~~~---------~~~~~----~~~~~~---~~~~d~~l~~~~~ 494 (526)
..||+.... ..+.++||||||++++|++||+.|...... ..... ++...- ..-......+...
T Consensus 200 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (335)
T PTZ00024 200 RAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK 279 (335)
T ss_pred CCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH
Confidence 346655432 357889999999999999999988432110 00000 000000 0000000000000
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 495 QKIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 495 ~~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
......-.++.++...|++.+|++||++.||+
T Consensus 280 ~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 311 (335)
T PTZ00024 280 TIFPNASDDAIDLLQSLLKLNPLERISAKEAL 311 (335)
T ss_pred HhCcCCChHHHHHHHHHcCCCchhccCHHHHh
Confidence 00001123466788999999999999999874
No 327
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=97.07 E-value=0.00011 Score=70.44 Aligned_cols=77 Identities=19% Similarity=0.309 Sum_probs=41.5
Q ss_pred cccccccccccceeeeehhcC-CCCCccccc--cccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMG-RHPGELLSS--LSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg-~~P~~~~~~--~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
..+.++|||||||+++|++++ +.|...... ...... ........++.+... ..+.+. ++-..|. .+|+
T Consensus 184 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~---~l~~~c~-~~P~ 254 (268)
T cd05086 184 EQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI-KDQQVKLFKPQLELP----YSERWY---EVLQFCW-LSPE 254 (268)
T ss_pred CCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-hhcccccCCCccCCC----CcHHHH---HHHHHHh-hCcc
Confidence 347789999999999999975 555432110 000000 000112233333211 122233 3444577 5699
Q ss_pred CCCCccccC
Q 009771 518 SRPTMQRIS 526 (526)
Q Consensus 518 ~RP~m~~v~ 526 (526)
+||+|+||+
T Consensus 255 ~Rp~~~~i~ 263 (268)
T cd05086 255 KRATAEEVH 263 (268)
T ss_pred cCCCHHHHH
Confidence 999999874
No 328
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=97.07 E-value=0.00016 Score=70.58 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=50.8
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCccccc---------cccccCCCcc--cccc-----ccCCC--CCC
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGELLSS---------LSSSSGPKIM--LINV-----LDQRL--SPP 492 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~~~~~---------~~~~~~~~~~--~~~~-----~d~~l--~~~ 492 (526)
..||... ....+.++|||||||+++|+++|+.|...... ......+..+ +.+. .|+.- .+.
T Consensus 184 ~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (302)
T cd07864 184 RPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRR 263 (302)
T ss_pred cChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccc
Confidence 3455432 23457789999999999999999988542110 0000000000 0000 00000 000
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 493 VNQKIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 493 ~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
...........+.++...|+..+|++||++.||+
T Consensus 264 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il 297 (302)
T cd07864 264 LREEFSFIPTPALDLLDHMLTLDPSKRCTAEEAL 297 (302)
T ss_pred hhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 0000000123567888899999999999999874
No 329
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=97.06 E-value=0.00015 Score=68.23 Aligned_cols=78 Identities=18% Similarity=0.182 Sum_probs=48.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
.+||.......+.++||||+|++++|+++|+.|....... ........+. .... ..+.++-..|
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------~~~~~~~~~~----~~~~---~~~~~li~~~ 212 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------INTHTTLNIP----EWVS---EEARSLLQQL 212 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------cccccccCCc----ccCC---HHHHHHHHHH
Confidence 3566665556778999999999999999999874321110 0000001111 1111 2344566779
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
.+.+|++||++.++
T Consensus 213 l~~dp~~R~~~~~~ 226 (237)
T cd05576 213 LQFNPTERLGAGVA 226 (237)
T ss_pred ccCCHHHhcCCCcc
Confidence 99999999998554
No 330
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=97.06 E-value=0.00013 Score=72.36 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=29.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|+|||||+++|++||+.|..
T Consensus 162 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~ 196 (328)
T cd05593 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (328)
T ss_pred cChhhhcCCCCCccCCccccchHHHHHhhCCCCCC
Confidence 45777766677899999999999999999999953
No 331
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.05 E-value=0.00013 Score=72.25 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=51.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||+++|++||+.|...... ......+.......+. .. -.++.++...|
T Consensus 168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-------~~~~~~i~~~~~~~p~-~~----~~~~~~li~~~ 235 (323)
T cd05615 168 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-------DELFQSIMEHNVSYPK-SL----SKEAVSICKGL 235 (323)
T ss_pred cCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCc-cC----CHHHHHHHHHH
Confidence 457877766788999999999999999999999542110 1011112222221111 11 12345677889
Q ss_pred CCCCCCCCCCcc
Q 009771 512 LSSQPKSRPTMQ 523 (526)
Q Consensus 512 ~~~~p~~RP~m~ 523 (526)
++.+|.+|++..
T Consensus 236 l~~~p~~R~~~~ 247 (323)
T cd05615 236 MTKHPSKRLGCG 247 (323)
T ss_pred cccCHhhCCCCC
Confidence 999999999853
No 332
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=97.05 E-value=7.5e-05 Score=73.86 Aligned_cols=77 Identities=19% Similarity=0.287 Sum_probs=46.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... ......+.......+ .....+ +.++--.|
T Consensus 162 ~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-------~~~~~~~~~~~~~~p--~~~~~~---~~~li~~~ 229 (323)
T cd05595 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------ERLFELILMEEIRFP--RTLSPE---AKSLLAGL 229 (323)
T ss_pred CCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcCCCCCC--CCCCHH---HHHHHHHH
Confidence 457777666778999999999999999999999532100 000111111111111 111122 33555679
Q ss_pred CCCCCCCCC
Q 009771 512 LSSQPKSRP 520 (526)
Q Consensus 512 ~~~~p~~RP 520 (526)
++.+|++||
T Consensus 230 L~~dP~~R~ 238 (323)
T cd05595 230 LKKDPKQRL 238 (323)
T ss_pred ccCCHHHhC
Confidence 999999998
No 333
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=97.05 E-value=0.00011 Score=72.49 Aligned_cols=78 Identities=18% Similarity=0.261 Sum_probs=49.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccc--cCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL--DQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|||||||+++|+++|+.|...... ......+. .+... .....+ +.++--
T Consensus 163 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-------~~~~~~~~~~~~~~~----~~~~~~---~~~li~ 228 (316)
T cd05620 163 IAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-------DELFESIRVDTPHYP----RWITKE---SKDILE 228 (316)
T ss_pred cCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCC----CCCCHH---HHHHHH
Confidence 457777666788899999999999999999999532100 00011110 11111 111122 335566
Q ss_pred hcCCCCCCCCCCcc
Q 009771 510 ACLSSQPKSRPTMQ 523 (526)
Q Consensus 510 ~C~~~~p~~RP~m~ 523 (526)
.|++.+|++||++.
T Consensus 229 ~~l~~dP~~R~~~~ 242 (316)
T cd05620 229 KLFERDPTRRLGVV 242 (316)
T ss_pred HHccCCHHHcCCCh
Confidence 89999999999984
No 334
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.05 E-value=9.2e-05 Score=73.41 Aligned_cols=78 Identities=17% Similarity=0.168 Sum_probs=49.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||++.|++||+.|....... .....+...+..-+ ..... .+.++...|
T Consensus 182 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~~p--~~~~~---~~~~li~~~ 249 (329)
T PTZ00263 182 LAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-------RIYEKILAGRLKFP--NWFDG---RARDLVKGL 249 (329)
T ss_pred cCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH-------HHHHHHhcCCcCCC--CCCCH---HHHHHHHHH
Confidence 4577776667788999999999999999999995321110 00111222222111 11112 244677889
Q ss_pred CCCCCCCCCC
Q 009771 512 LSSQPKSRPT 521 (526)
Q Consensus 512 ~~~~p~~RP~ 521 (526)
++.+|++||+
T Consensus 250 L~~dP~~R~~ 259 (329)
T PTZ00263 250 LQTDHTKRLG 259 (329)
T ss_pred hhcCHHHcCC
Confidence 9999999996
No 335
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.03 E-value=0.00029 Score=68.88 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=27.2
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|+||+||++.|++||+.|..
T Consensus 170 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 205 (303)
T cd07869 170 RPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFP 205 (303)
T ss_pred CChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 34665432 346778999999999999999999954
No 336
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.03 E-value=0.00012 Score=71.45 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=26.1
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.... ...+.++|||||||++.|++||+.|.
T Consensus 171 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f 205 (301)
T cd07873 171 RPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLF 205 (301)
T ss_pred cCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCC
Confidence 34554432 34577899999999999999999884
No 337
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=97.02 E-value=0.00028 Score=70.01 Aligned_cols=79 Identities=19% Similarity=0.232 Sum_probs=46.0
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc--CCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD--QRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||..... ..+.++|||||||++.|++||+.|...... ......+.. .++.. ....++ +.++-
T Consensus 163 ~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~~~---~~~~~~---~~~li 229 (330)
T cd05586 163 LAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-------QQMYRNIAFGKVRFPK---NVLSDE---GRQFV 229 (330)
T ss_pred cCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-------HHHHHHHHcCCCCCCC---ccCCHH---HHHHH
Confidence 446655432 367889999999999999999999432100 000111111 11111 111122 33566
Q ss_pred HhcCCCCCCCCCCcc
Q 009771 509 FACLSSQPKSRPTMQ 523 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~ 523 (526)
-.|++.+|.+||++.
T Consensus 230 ~~~L~~~P~~R~~~~ 244 (330)
T cd05586 230 KGLLNRNPQHRLGAH 244 (330)
T ss_pred HHHcCCCHHHCCCCC
Confidence 789999999999653
No 338
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.02 E-value=0.00028 Score=69.11 Aligned_cols=88 Identities=24% Similarity=0.295 Sum_probs=50.7
Q ss_pred CCCCchh-cc-cccccccccccccceeeeehhcCCCCCccccccccccCCCcc-ccccc--c-CCCCCCcccch--HHHH
Q 009771 430 NSLNGKL-AH-TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIM-LINVL--D-QRLSPPVNQKI--VQDI 501 (526)
Q Consensus 430 n~l~~~~-~~-~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~-~~~~~--d-~~l~~~~~~~~--~~~~ 501 (526)
+.+.||. .+ .-....|+|+|||||..+|+.+|.-|... +|... +..-+ + |.+.....+++ ..--
T Consensus 195 ~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k--------~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ 266 (516)
T KOG0582|consen 195 CWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSK--------YPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFS 266 (516)
T ss_pred cccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCccc--------CChHHHHHHHhcCCCCCcccccCChHHhhhhc
Confidence 3456776 22 23568899999999999999999999532 12111 00000 0 00000000111 1111
Q ss_pred HHHHHHHHhcCCCCCCCCCCcccc
Q 009771 502 ILVSTIAFACLSSQPKSRPTMQRI 525 (526)
Q Consensus 502 ~~~~~la~~C~~~~p~~RP~m~~v 525 (526)
..+.+.--.|+..+|+.||+.++.
T Consensus 267 ksf~e~i~~CL~kDP~kRptAskL 290 (516)
T KOG0582|consen 267 KSFREMIALCLVKDPSKRPTASKL 290 (516)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHH
Confidence 245566778999999999998764
No 339
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.02 E-value=9.1e-05 Score=81.71 Aligned_cols=82 Identities=22% Similarity=0.279 Sum_probs=50.8
Q ss_pred CCchhcc--cccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc--CCCCCCcccchHHHHHHHHHH
Q 009771 432 LNGKLAH--TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD--QRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 432 l~~~~~~--~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~l 507 (526)
..||... ....+.++|||||||+++|++||+.|......+. .+...+. +.+... .. -..+..+
T Consensus 208 mAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~-------qli~~lk~~p~lpi~--~~----S~eL~dL 274 (1021)
T PTZ00266 208 WSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFS-------QLISELKRGPDLPIK--GK----SKELNIL 274 (1021)
T ss_pred cCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH-------HHHHHHhcCCCCCcC--CC----CHHHHHH
Confidence 4577553 2346789999999999999999999953211110 0111111 111100 11 1235567
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
...|++.+|.+||++.|++
T Consensus 275 I~~~L~~dPeeRPSa~QlL 293 (1021)
T PTZ00266 275 IKNLLNLSAKERPSALQCL 293 (1021)
T ss_pred HHHHhcCChhHCcCHHHHh
Confidence 7889999999999998863
No 340
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.02 E-value=0.0013 Score=58.01 Aligned_cols=106 Identities=24% Similarity=0.252 Sum_probs=67.5
Q ss_pred CCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCC
Q 009771 125 SNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLR 204 (526)
Q Consensus 125 ~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~ 204 (526)
.+...+||++|.+... ..|..++.|.+|.|++|+++..-|.--..+++|+.|.|.+|.+.... .+ ..+..++
T Consensus 42 d~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~-----dl-~pLa~~p 113 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELG-----DL-DPLASCP 113 (233)
T ss_pred cccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhh-----hc-chhccCC
Confidence 3556778888877532 44667778888888888887555544445677888888887765321 11 1245677
Q ss_pred CCCEEEccCCcCCCcC---chhhcCcCccCccccccc
Q 009771 205 NLQWLDLSSNKLSGTI---PKEIGSLRNLKELDLSSN 238 (526)
Q Consensus 205 ~L~~L~l~~n~l~~~~---p~~l~~l~~L~~L~l~~n 238 (526)
+|++|.+-+|..+..- --.+..+++|+.||+.+-
T Consensus 114 ~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 114 KLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred ccceeeecCCchhcccCceeEEEEecCcceEeehhhh
Confidence 8888887777665321 123556777888887654
No 341
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=97.02 E-value=0.00012 Score=72.95 Aligned_cols=94 Identities=18% Similarity=0.101 Sum_probs=52.1
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCcccc---------ccccccCCCccccccccCC-------CC----
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLS---------SLSSSSGPKIMLINVLDQR-------LS---- 490 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~---------~~~~~~~~~~~~~~~~d~~-------l~---- 490 (526)
..||.... ...+.++|+|||||++.|+++|+.|..... .......++ ....+.+.. +.
T Consensus 175 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 253 (337)
T cd07858 175 RAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE-DLGFIRNEKARRYIRSLPYTPR 253 (337)
T ss_pred cChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChH-HhhhcCchhhhHHHHhcCcccc
Confidence 45665432 357889999999999999999998853210 000000000 000000000 00
Q ss_pred CCcccchHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 491 PPVNQKIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 491 ~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
............++.++...|++.+|++||+|.||+
T Consensus 254 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell 289 (337)
T cd07858 254 QSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEAL 289 (337)
T ss_pred cCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHH
Confidence 000000011224467889999999999999999874
No 342
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=97.01 E-value=0.00019 Score=75.39 Aligned_cols=76 Identities=28% Similarity=0.412 Sum_probs=54.3
Q ss_pred cccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccc--cCCCCCCcccchHHHHHHHHHHHHhcCC
Q 009771 437 AHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVL--DQRLSPPVNQKIVQDIILVSTIAFACLS 513 (526)
Q Consensus 437 ~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~~la~~C~~ 513 (526)
....+.+.++|||||||..+|++| |.+|.+.+.-- .+.+.+ -.|+. ...-|-..|..+.+.|+.
T Consensus 872 i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--------eI~dlle~geRLs-----qPpiCtiDVy~~mvkCwm 938 (1177)
T KOG1025|consen 872 IRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--------EIPDLLEKGERLS-----QPPICTIDVYMVMVKCWM 938 (1177)
T ss_pred hhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--------HhhHHHhccccCC-----CCCCccHHHHHHHHHHhc
Confidence 345578999999999999999996 99997643211 122222 13343 234466778888999999
Q ss_pred CCCCCCCCcccc
Q 009771 514 SQPKSRPTMQRI 525 (526)
Q Consensus 514 ~~p~~RP~m~~v 525 (526)
.+++.||++++.
T Consensus 939 id~~~rp~fkel 950 (1177)
T KOG1025|consen 939 IDADSRPTFKEL 950 (1177)
T ss_pred cCcccCccHHHH
Confidence 999999998763
No 343
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=97.01 E-value=0.0003 Score=69.28 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=27.6
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||+... ...+.++|+||+||+++|++||+.|.
T Consensus 182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f 216 (317)
T cd07868 182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred cCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCc
Confidence 45776543 34678899999999999999999984
No 344
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.01 E-value=0.00031 Score=71.24 Aligned_cols=86 Identities=22% Similarity=0.371 Sum_probs=49.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc--CCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD--QRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|||||||+++|++||+.|..... +......+++ ..+..+.......+...+++ .+
T Consensus 215 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-------~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~-~l 286 (381)
T cd05626 215 IAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPT-------PTETQLKVINWENTLHIPPQVKLSPEAVDLIT-KL 286 (381)
T ss_pred cCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCC-------HHHHHHHHHccccccCCCCCCCCCHHHHHHHH-HH
Confidence 45777666677889999999999999999999953211 0000111111 11111100111123333322 24
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|..++|..||+..||
T Consensus 287 l~~~~~~~~R~~~~~~ 302 (381)
T cd05626 287 CCSAEERLGRNGADDI 302 (381)
T ss_pred ccCcccccCCCCHHHH
Confidence 6888888889998876
No 345
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.01 E-value=0.0001 Score=71.43 Aligned_cols=82 Identities=13% Similarity=0.174 Sum_probs=49.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||++.|+++|+.|........ ........++. ......... ...+.++.-.|
T Consensus 168 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~----~~~~~~~~~~~-~~~~~~~~~---~~~~~~li~~~ 239 (285)
T cd05630 168 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI----KREEVERLVKE-VQEEYSEKF---SPDARSLCKML 239 (285)
T ss_pred cChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc----hHHHHHhhhhh-hhhhcCccC---CHHHHHHHHHH
Confidence 35777766778899999999999999999999954211100 00001111110 000000111 12345677889
Q ss_pred CCCCCCCCCC
Q 009771 512 LSSQPKSRPT 521 (526)
Q Consensus 512 ~~~~p~~RP~ 521 (526)
++.+|++||+
T Consensus 240 l~~~p~~R~s 249 (285)
T cd05630 240 LCKDPKERLG 249 (285)
T ss_pred hhcCHHHccC
Confidence 9999999999
No 346
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=97.00 E-value=0.00024 Score=69.05 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=26.7
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||..... ..+.++|+||||++++|+++|+.|.
T Consensus 173 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f 207 (293)
T cd07843 173 RAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLF 207 (293)
T ss_pred cCchhhcCCccccchhhHHHHHHHHHHHHhCCCCC
Confidence 446655432 3578999999999999999999884
No 347
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.00 E-value=0.00012 Score=73.61 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=27.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
..||.......+.++|||||||+++|++++.+|
T Consensus 223 ~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 223 NAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred cCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 356766666778999999999999999997766
No 348
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=96.95 E-value=0.00016 Score=71.61 Aligned_cols=34 Identities=21% Similarity=0.203 Sum_probs=28.0
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||..... ..+.++|+||||+++.|++||+.|.
T Consensus 173 ~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf 207 (330)
T cd07834 173 RAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLF 207 (330)
T ss_pred CCceeeecccCCCcchhHHHHHHHHHHHHcCCCCc
Confidence 446665555 6788999999999999999999884
No 349
>PHA03207 serine/threonine kinase US3; Provisional
Probab=96.95 E-value=0.00017 Score=73.38 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=29.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||+......+.++|||||||+++|+++|+.|.
T Consensus 254 ~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf 287 (392)
T PHA03207 254 NSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL 287 (392)
T ss_pred cCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 3577776667888999999999999999999994
No 350
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=96.95 E-value=0.00023 Score=70.54 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=27.1
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||...+ ...+.++||||||+++.|++||+.|.
T Consensus 172 ~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f 206 (328)
T cd07856 172 RAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLF 206 (328)
T ss_pred cCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCC
Confidence 44665433 35688999999999999999999874
No 351
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=96.95 E-value=0.00031 Score=70.14 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=26.5
Q ss_pred Cchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 433 NGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 433 ~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
.||.... ...+.++|||||||++.|++||+.|.
T Consensus 183 aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf 216 (343)
T cd07851 183 APEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLF 216 (343)
T ss_pred CHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 4665432 35678999999999999999999884
No 352
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=96.93 E-value=0.00019 Score=71.07 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=49.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||+||++.|+++|+.|...... ......+........ .....+ +.++-..|
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~~~--~~~~~~---~~~li~~~ 230 (325)
T cd05602 163 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------AEMYDNILNKPLQLK--PNITNS---ARHLLEGL 230 (325)
T ss_pred cCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-------HHHHHHHHhCCcCCC--CCCCHH---HHHHHHHH
Confidence 457777767788899999999999999999999532110 000111111111100 111122 33455678
Q ss_pred CCCCCCCCCCccc
Q 009771 512 LSSQPKSRPTMQR 524 (526)
Q Consensus 512 ~~~~p~~RP~m~~ 524 (526)
++.+|.+||+..+
T Consensus 231 l~~~p~~R~~~~~ 243 (325)
T cd05602 231 LQKDRTKRLGAKD 243 (325)
T ss_pred cccCHHHCCCCCC
Confidence 9999999998764
No 353
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=96.93 E-value=0.00018 Score=71.55 Aligned_cols=94 Identities=18% Similarity=0.106 Sum_probs=52.0
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCccccc------cccc-cCC-CccccccccCC-------CCCCccc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSS------LSSS-SGP-KIMLINVLDQR-------LSPPVNQ 495 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~------~~~~-~~~-~~~~~~~~d~~-------l~~~~~~ 495 (526)
..||.... ...+.++|||||||+++|+++|+.|...... .... ..+ ......+-+.+ ..... .
T Consensus 178 ~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 256 (334)
T cd07855 178 RAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQ-P 256 (334)
T ss_pred cChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCC-C
Confidence 45665432 3578899999999999999999998532100 0000 000 00000000000 00000 0
Q ss_pred ch-----HHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 496 KI-----VQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 496 ~~-----~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.. ......+.++...|++.+|++||++.||+
T Consensus 257 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 292 (334)
T cd07855 257 VPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL 292 (334)
T ss_pred CCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 00 11134567888999999999999998864
No 354
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=96.92 E-value=0.00014 Score=70.02 Aligned_cols=82 Identities=15% Similarity=0.233 Sum_probs=53.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||||++++|+++|+.|......+. ....+.+.....+ ... -..+.++...|
T Consensus 189 ~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~--~~~---~~~~~~li~~~ 256 (280)
T cd05581 189 VSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL-------TFQKILKLEYSFP--PNF---PPDAKDLIEKL 256 (280)
T ss_pred cCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH-------HHHHHHhcCCCCC--Ccc---CHHHHHHHHHH
Confidence 45776666678889999999999999999999954321110 0111111111111 111 23456788899
Q ss_pred CCCCCCCCCCc----ccc
Q 009771 512 LSSQPKSRPTM----QRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m----~~v 525 (526)
++.+|++||++ .|+
T Consensus 257 l~~~p~~R~~~~~~~~~l 274 (280)
T cd05581 257 LVLDPQDRLGVNEGYDEL 274 (280)
T ss_pred hcCCHhhCCCcccCHHHH
Confidence 99999999999 665
No 355
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=96.92 E-value=0.00031 Score=67.83 Aligned_cols=34 Identities=18% Similarity=0.243 Sum_probs=26.3
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.... ...+.++|+|||||+++|++||+.|.
T Consensus 167 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~ 201 (284)
T cd07836 167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLF 201 (284)
T ss_pred cChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 34565433 24577899999999999999999884
No 356
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=96.92 E-value=0.00018 Score=78.94 Aligned_cols=81 Identities=21% Similarity=0.249 Sum_probs=50.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccc-cccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIML-INVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++||+.|...... .+... ..+.++.-..+ ..+....+.+++..
T Consensus 198 mAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~------~ki~~~~~i~~P~~~~p----~~~iP~~L~~LI~r 267 (932)
T PRK13184 198 MAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG------RKISYRDVILSPIEVAP----YREIPPFLSQIAMK 267 (932)
T ss_pred CCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch------hhhhhhhhccChhhccc----cccCCHHHHHHHHH
Confidence 468887777889999999999999999999999532110 00000 01111110000 00112345678889
Q ss_pred cCCCCCCCCCCc
Q 009771 511 CLSSQPKSRPTM 522 (526)
Q Consensus 511 C~~~~p~~RP~m 522 (526)
|++.+|++||+.
T Consensus 268 cL~~DP~kR~ss 279 (932)
T PRK13184 268 ALAVDPAERYSS 279 (932)
T ss_pred HccCChhhCcCH
Confidence 999999999754
No 357
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=96.91 E-value=0.00019 Score=68.77 Aligned_cols=86 Identities=16% Similarity=0.207 Sum_probs=50.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... .......+......... .. ...... +.++-..|
T Consensus 173 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-~~-~~~~~~---~~~li~~~ 244 (267)
T PHA03390 173 FSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED---EELDLESLLKRQQKKLP-FI-KNVSKN---ANDFVQSM 244 (267)
T ss_pred cChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc---chhhHHHHHHhhcccCC-cc-cccCHH---HHHHHHHH
Confidence 457776666778899999999999999999999542110 00000001111111111 00 111122 34455699
Q ss_pred CCCCCCCCCC-cccc
Q 009771 512 LSSQPKSRPT-MQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~-m~~v 525 (526)
++.+|.+||+ +.|+
T Consensus 245 l~~~p~~R~~~~~~~ 259 (267)
T PHA03390 245 LKYNINYRLTNYNEI 259 (267)
T ss_pred hccChhhCCchHHHH
Confidence 9999999995 6765
No 358
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=96.84 E-value=0.0002 Score=71.40 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=27.2
Q ss_pred CCchhc-ccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLA-HTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~-~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.. .....+.++|+|||||+++|+++|+.|..
T Consensus 185 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~ 220 (342)
T cd07854 185 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFA 220 (342)
T ss_pred cCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCC
Confidence 346643 22346788999999999999999999853
No 359
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=96.81 E-value=0.00029 Score=68.04 Aligned_cols=82 Identities=12% Similarity=0.227 Sum_probs=48.1
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCccccccccccCCCcccccc---ccCCCCCCcccchHHHHHHHHHH
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINV---LDQRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~---~d~~l~~~~~~~~~~~~~~~~~l 507 (526)
..||... ....+.++|+|||||++.|++||+.|......- ... .+... .+..+. .....++ .++
T Consensus 162 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~-~~~~~~~~~~~~~~----~~~~~~~---~~l 229 (279)
T cd05633 162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKH-EIDRMTLTVNVELP----DSFSPEL---KSL 229 (279)
T ss_pred cCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc----CHH-HHHHHhhcCCcCCc----cccCHHH---HHH
Confidence 3466554 234678999999999999999999995421110 000 01100 111111 1112333 345
Q ss_pred HHhcCCCCCCCCC-----Ccccc
Q 009771 508 AFACLSSQPKSRP-----TMQRI 525 (526)
Q Consensus 508 a~~C~~~~p~~RP-----~m~~v 525 (526)
-..|+..+|.+|| +++|+
T Consensus 230 i~~~l~~~p~~R~~~~~~~~~~~ 252 (279)
T cd05633 230 LEGLLQRDVSKRLGCLGRGAQEV 252 (279)
T ss_pred HHHHhcCCHHHhcCCCCCCHHHH
Confidence 5689999999999 47665
No 360
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=96.81 E-value=0.00033 Score=68.70 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=27.0
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||...+ ...+.++||||+||+++|+++|+.|..
T Consensus 175 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~ 210 (309)
T cd07845 175 RAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP 210 (309)
T ss_pred cChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCC
Confidence 34665433 345788999999999999999998843
No 361
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=96.79 E-value=0.00042 Score=69.74 Aligned_cols=35 Identities=26% Similarity=0.429 Sum_probs=30.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++||++|+.|..
T Consensus 203 ~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 45777766677889999999999999999999953
No 362
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=96.78 E-value=0.00026 Score=68.65 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=26.4
Q ss_pred Cchhcc-cccccccccccccceeeeehhcCCCCC
Q 009771 433 NGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 433 ~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
.||... ....+.++|+||+||+++|++||+.|.
T Consensus 171 aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf 204 (288)
T cd07871 171 PPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMF 204 (288)
T ss_pred ChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCC
Confidence 466543 245678899999999999999999884
No 363
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=96.77 E-value=0.00022 Score=67.28 Aligned_cols=79 Identities=19% Similarity=0.195 Sum_probs=49.2
Q ss_pred CchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcC
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACL 512 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~ 512 (526)
.||.......+.++|+||||++++|+++|+.|...... ......+.......+ ... -..+.++.-.|+
T Consensus 161 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~--~~~---~~~l~~~i~~~l 228 (250)
T cd05123 161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-------KEIYEKILKDPLRFP--EFL---SPEARDLISGLL 228 (250)
T ss_pred ChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHhcCCCCCC--CCC---CHHHHHHHHHHh
Confidence 46666555678899999999999999999999532110 000111111111111 111 233456778899
Q ss_pred CCCCCCCCCcc
Q 009771 513 SSQPKSRPTMQ 523 (526)
Q Consensus 513 ~~~p~~RP~m~ 523 (526)
..+|++||++.
T Consensus 229 ~~~p~~R~~~~ 239 (250)
T cd05123 229 QKDPTKRLGSG 239 (250)
T ss_pred cCCHhhCCCcc
Confidence 99999999993
No 364
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=96.74 E-value=0.00049 Score=66.24 Aligned_cols=85 Identities=16% Similarity=0.202 Sum_probs=50.2
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccc-cccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLIN-VLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||+......+.++|+|||||++.|+++|+.|......+.... .+.. +...... ......+ .+.++--
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~---~~~~li~ 230 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE----ELKRRTLEMAVE--YPDKFSP---EAKDLCE 230 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH----HHHhcccccccc--CCccCCH---HHHHHHH
Confidence 345777666667889999999999999999999954322111000 0100 1100000 0011112 2345567
Q ss_pred hcCCCCCCCCCCccc
Q 009771 510 ACLSSQPKSRPTMQR 524 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~ 524 (526)
.|++.+|++||+..|
T Consensus 231 ~~l~~~p~~R~~~~~ 245 (277)
T cd05577 231 ALLQKDPEKRLGCRG 245 (277)
T ss_pred HHccCChhHccCCCc
Confidence 889999999996655
No 365
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=96.70 E-value=0.00031 Score=70.02 Aligned_cols=82 Identities=16% Similarity=0.212 Sum_probs=50.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||++.|++||+.|...... ......+.......+ ....++ +.++--.|
T Consensus 195 ~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~i~~~~~~~p--~~~~~~---~~~li~~~ 262 (340)
T PTZ00426 195 IAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP-------LLIYQKILEGIIYFP--KFLDNN---CKHLMKKL 262 (340)
T ss_pred cCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH-------HHHHHHHhcCCCCCC--CCCCHH---HHHHHHHH
Confidence 457777666778899999999999999999999542110 000111222111111 111122 34566789
Q ss_pred CCCCCCCCC-----Ccccc
Q 009771 512 LSSQPKSRP-----TMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP-----~m~~v 525 (526)
++.+|++|+ ++.|+
T Consensus 263 l~~dp~~R~~~~~~~~~~~ 281 (340)
T PTZ00426 263 LSHDLTKRYGNLKKGAQNV 281 (340)
T ss_pred cccCHHHcCCCCCCCHHHH
Confidence 999999995 56554
No 366
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=96.67 E-value=0.00034 Score=68.59 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=26.4
Q ss_pred Cchhcc-cccccccccccccceeeeehhcCCCCC
Q 009771 433 NGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 433 ~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
.||... ....+.++|||||||+++|++||+.|.
T Consensus 172 aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf 205 (309)
T cd07872 172 PPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLF 205 (309)
T ss_pred CCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 466543 335678999999999999999999884
No 367
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=96.66 E-value=0.0076 Score=50.41 Aligned_cols=86 Identities=16% Similarity=0.212 Sum_probs=36.9
Q ss_pred CCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCC
Q 009771 94 RLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVR 173 (526)
Q Consensus 94 ~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 173 (526)
...|.+.++|+.+.+.. .+...-...|.++++|+.+.+.++ +...-...|.++++|+.+.+.. .+.......+.+++
T Consensus 5 ~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~ 81 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCT 81 (129)
T ss_dssp TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-T
T ss_pred HHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccc
Confidence 44566666666666653 333233345566666666666553 4333333455555666666644 22212223344455
Q ss_pred CCCEEEccC
Q 009771 174 NLETLSLDG 182 (526)
Q Consensus 174 ~L~~L~L~~ 182 (526)
+|+.+++..
T Consensus 82 ~l~~i~~~~ 90 (129)
T PF13306_consen 82 NLKNIDIPS 90 (129)
T ss_dssp TECEEEETT
T ss_pred cccccccCc
Confidence 565555543
No 368
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=96.65 E-value=0.00039 Score=69.34 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=27.3
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.... ...+.++|||||||++.|+++|+.|.
T Consensus 182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf 216 (343)
T cd07878 182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALF 216 (343)
T ss_pred cCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCC
Confidence 34665443 45678999999999999999999884
No 369
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.65 E-value=0.00085 Score=65.72 Aligned_cols=83 Identities=19% Similarity=0.386 Sum_probs=53.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
+.||.........|.|+||+||...||.+|..|.-.+.. .++.-.+-..-.|.. +. +.-..+-+..-.|
T Consensus 178 MAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP--------mrvlflIpk~~PP~L-~~--~~S~~~kEFV~~C 246 (467)
T KOG0201|consen 178 MAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP--------MRVLFLIPKSAPPRL-DG--DFSPPFKEFVEAC 246 (467)
T ss_pred cchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc--------ceEEEeccCCCCCcc-cc--ccCHHHHHHHHHH
Confidence 458888877889999999999999999999999432211 111111111111111 11 2222344556689
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
+..+|+.||+..+.
T Consensus 247 L~k~P~~RpsA~~L 260 (467)
T KOG0201|consen 247 LDKNPEFRPSAKEL 260 (467)
T ss_pred hhcCcccCcCHHHH
Confidence 99999999998775
No 370
>PTZ00036 glycogen synthase kinase; Provisional
Probab=96.64 E-value=0.00035 Score=72.25 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=27.7
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||... ....+.++|||||||+++|++||+.|.
T Consensus 237 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf 271 (440)
T PTZ00036 237 RAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIF 271 (440)
T ss_pred cCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 4577643 345788999999999999999999884
No 371
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=96.62 E-value=0.00045 Score=70.33 Aligned_cols=81 Identities=25% Similarity=0.498 Sum_probs=49.7
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc---CCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
..+.++|+|||||++.|+++.+.|.+....-. .++..+..+.+ +-..+.. ....+....++.+.-.|+.++|+
T Consensus 134 ~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~---~~~eii~~~~~~~~~~~rP~i-~~~~e~~~~l~~l~~~cw~e~P~ 209 (484)
T KOG1023|consen 134 ALTQKGDIYSFGIIMYEILFRSGPFDLRNLVE---DPDEIILRVKKGGSNPFRPSI-ELLNELPPELLLLVARCWEEIPE 209 (484)
T ss_pred cccccCCeehHHHHHHHHHhccCccccccccC---ChHHHHHHHHhcCCCCcCcch-hhhhhcchHHHHHHHHhcccChh
Confidence 36788999999999999999999955321110 11111111111 1111211 11112233588899999999999
Q ss_pred CCCCcccc
Q 009771 518 SRPTMQRI 525 (526)
Q Consensus 518 ~RP~m~~v 525 (526)
+||++..|
T Consensus 210 ~rPs~~~i 217 (484)
T KOG1023|consen 210 KRPSIEQI 217 (484)
T ss_pred hCccHHHH
Confidence 99999865
No 372
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.60 E-value=0.0012 Score=60.68 Aligned_cols=81 Identities=23% Similarity=0.337 Sum_probs=44.7
Q ss_pred CCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCc--cCCccCCcccCCCCCCCEEEccCCCCCCCCccc---cCCCCC
Q 009771 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYEN--NLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIE---IGSVRN 174 (526)
Q Consensus 100 l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n--~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~---l~~l~~ 174 (526)
+..|+.|++.+..++.. ..+..+++|++|.++.| .+++.++....++++|++|++++|++.. +.. +..+.+
T Consensus 42 ~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~l~n 117 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKELEN 117 (260)
T ss_pred ccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhhhcc
Confidence 33445555555444321 23445677777777777 5555555545566777777777777642 222 233444
Q ss_pred CCEEEccCCc
Q 009771 175 LETLSLDGNK 184 (526)
Q Consensus 175 L~~L~L~~n~ 184 (526)
|..|++.+|.
T Consensus 118 L~~Ldl~n~~ 127 (260)
T KOG2739|consen 118 LKSLDLFNCS 127 (260)
T ss_pred hhhhhcccCC
Confidence 5555555544
No 373
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.60 E-value=0.0003 Score=69.80 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=27.3
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|+|||||++.|+++|+.|..
T Consensus 176 ~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~ 211 (332)
T cd07857 176 RAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK 211 (332)
T ss_pred cCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence 34665443 346789999999999999999998843
No 374
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=96.56 E-value=0.00071 Score=68.43 Aligned_cols=35 Identities=29% Similarity=0.457 Sum_probs=30.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||++.|++||+.|..
T Consensus 211 ~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~ 245 (376)
T cd05598 211 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFL 245 (376)
T ss_pred cCHHHHcCCCCCcceeeeeccceeeehhhCCCCCC
Confidence 45787776778889999999999999999999953
No 375
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=96.55 E-value=0.00043 Score=66.75 Aligned_cols=85 Identities=12% Similarity=0.142 Sum_probs=49.8
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.... ...+.++|+|||||++.|+++|+.|............ . ......+..+.. . .-.++.++...
T Consensus 162 ~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~-~-~~~~~~~~~~~~----~---~s~~~~~li~~ 232 (278)
T cd05606 162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-D-RMTLTMAVELPD----S---FSPELRSLLEG 232 (278)
T ss_pred cCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH-H-HHhhccCCCCCC----c---CCHHHHHHHHH
Confidence 34666543 2467889999999999999999999543211000000 0 000011111211 1 12345566779
Q ss_pred cCCCCCCCCC-----Ccccc
Q 009771 511 CLSSQPKSRP-----TMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP-----~m~~v 525 (526)
|+..+|.+|| ++.|+
T Consensus 233 ~l~~~p~~R~~~~~~~~~~l 252 (278)
T cd05606 233 LLQRDVNRRLGCLGRGAQEV 252 (278)
T ss_pred HhhcCHHhccCCCCCCHHHH
Confidence 9999999999 77665
No 376
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=96.53 E-value=0.0071 Score=50.57 Aligned_cols=82 Identities=18% Similarity=0.247 Sum_probs=29.0
Q ss_pred ccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCC
Q 009771 272 LFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALS 351 (526)
Q Consensus 272 l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 351 (526)
+.++++|+.+.+.. .+...-...|.++++|+.+.+.++ +...-...|..+++++.+.+.+ .+.......+..+.+++
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~ 84 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLK 84 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTEC
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccccc
Confidence 34445555555542 233222334555555555555543 3322223344444455555533 22211222333344444
Q ss_pred eecCc
Q 009771 352 YLDLS 356 (526)
Q Consensus 352 ~L~L~ 356 (526)
.+++.
T Consensus 85 ~i~~~ 89 (129)
T PF13306_consen 85 NIDIP 89 (129)
T ss_dssp EEEET
T ss_pred ccccC
Confidence 44443
No 377
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=96.41 E-value=0.00069 Score=68.38 Aligned_cols=26 Identities=35% Similarity=0.572 Sum_probs=23.2
Q ss_pred cccccccccccceeeeehhcCCCCCc
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..+.++|||||||+++|++||+.|..
T Consensus 223 ~~~~~~DiwSlGvilyelltG~~Pf~ 248 (370)
T cd05596 223 YYGRECDWWSVGVFLYEMLVGDTPFY 248 (370)
T ss_pred CCCCceeeeehhHHHHHHHhCCCCcC
Confidence 36789999999999999999999943
No 378
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.35 E-value=0.0014 Score=60.56 Aligned_cols=79 Identities=22% Similarity=0.291 Sum_probs=52.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc--cccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE--LLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~--~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
.+||..+....+.|+||||.||++.||..=+.|.. ++-+.. .-+.+.--++. + +..--..+.+|+-
T Consensus 195 MSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~----------~KI~qgd~~~~-p-~~~YS~~l~~li~ 262 (375)
T KOG0591|consen 195 MSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLC----------KKIEQGDYPPL-P-DEHYSTDLRELIN 262 (375)
T ss_pred cCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHH----------HHHHcCCCCCC-c-HHHhhhHHHHHHH
Confidence 56898899999999999999999999999999833 221111 11111100001 0 0122345667888
Q ss_pred hcCCCCCCCCCCc
Q 009771 510 ACLSSQPKSRPTM 522 (526)
Q Consensus 510 ~C~~~~p~~RP~m 522 (526)
.|...+|+.||+.
T Consensus 263 ~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 263 MCIAVDPEQRPDT 275 (375)
T ss_pred HHccCCcccCCCc
Confidence 9999999999974
No 379
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=96.31 E-value=0.00064 Score=65.96 Aligned_cols=78 Identities=14% Similarity=0.132 Sum_probs=47.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||||+++.|++||+.|...... ......+......-+ ..... .+.++-..|
T Consensus 165 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~--~~~~~---~l~~li~~~ 232 (290)
T cd05580 165 LAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-------IQIYEKILEGKVRFP--SFFSP---DAKDLIRNL 232 (290)
T ss_pred cChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcCCccCC--ccCCH---HHHHHHHHH
Confidence 457766655678899999999999999999999532110 000111111111101 11112 334566789
Q ss_pred CCCCCCCCCC
Q 009771 512 LSSQPKSRPT 521 (526)
Q Consensus 512 ~~~~p~~RP~ 521 (526)
++.+|.+||+
T Consensus 233 l~~~p~~R~~ 242 (290)
T cd05580 233 LQVDLTKRLG 242 (290)
T ss_pred ccCCHHHccC
Confidence 9999999993
No 380
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.29 E-value=0.00077 Score=65.37 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=45.7
Q ss_pred CCchhccc--ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHT--MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~--~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||+... ...+.++||||||+++.|++||+.|...... ......+.+.+.....+ .....-..+.++..
T Consensus 173 ~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~ 244 (290)
T cd05613 173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE----KNSQAEISRRILKSEPP----YPQEMSALAKDIIQ 244 (290)
T ss_pred CChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc----cccHHHHHHHhhccCCC----CCccCCHHHHHHHH
Confidence 34565543 2356789999999999999999999532100 00000011111111100 00111234557788
Q ss_pred hcCCCCCCCCCC
Q 009771 510 ACLSSQPKSRPT 521 (526)
Q Consensus 510 ~C~~~~p~~RP~ 521 (526)
.|++.+|++||+
T Consensus 245 ~~l~~~p~~R~~ 256 (290)
T cd05613 245 RLLMKDPKKRLG 256 (290)
T ss_pred HHhcCCHHHhcC
Confidence 999999999983
No 381
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.28 E-value=9.6e-05 Score=67.95 Aligned_cols=85 Identities=21% Similarity=0.204 Sum_probs=48.1
Q ss_pred CCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCc-cccCCCCCCCEE
Q 009771 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIP-IEIGSVRNLETL 178 (526)
Q Consensus 100 l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L 178 (526)
+.+.+.|++.++.+++. ....+++.|++|.||-|.++.. ..+..|++|++|+|..|.|...-. .-+.++++|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 44555666666666543 2344566777777777776643 335666777777777776642111 124455556666
Q ss_pred EccCCcCCcc
Q 009771 179 SLDGNKLSGV 188 (526)
Q Consensus 179 ~L~~n~l~~~ 188 (526)
.|..|.-.|.
T Consensus 94 WL~ENPCc~~ 103 (388)
T KOG2123|consen 94 WLDENPCCGE 103 (388)
T ss_pred hhccCCcccc
Confidence 6655554443
No 382
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=96.26 E-value=0.0017 Score=64.33 Aligned_cols=85 Identities=18% Similarity=0.324 Sum_probs=47.9
Q ss_pred CCchhcc-----cccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc--C--CCCCCcccchHHHHH
Q 009771 432 LNGKLAH-----TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD--Q--RLSPPVNQKIVQDII 502 (526)
Q Consensus 432 l~~~~~~-----~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d--~--~l~~~~~~~~~~~~~ 502 (526)
..||... ....+.++|||||||+++|+++|+.|....... + ....+.. . .+.+.. ....+++.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~------~-~~~~i~~~~~~~~~~~~~-~~~~~~~~ 241 (331)
T cd05597 170 ISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------E-TYGKIMNHKEHFQFPPDV-TDVSEEAK 241 (331)
T ss_pred cCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH------H-HHHHHHcCCCcccCCCcc-CCCCHHHH
Confidence 3466543 234677899999999999999999995321100 0 0000100 0 111111 11234455
Q ss_pred HHHHHHHhcCCCCCCCCCCcccc
Q 009771 503 LVSTIAFACLSSQPKSRPTMQRI 525 (526)
Q Consensus 503 ~~~~la~~C~~~~p~~RP~m~~v 525 (526)
.+++ .+.|....+..||++.++
T Consensus 242 ~li~-~ll~~~~~r~~r~~~~~~ 263 (331)
T cd05597 242 DLIR-RLICSPETRLGRNGLQDF 263 (331)
T ss_pred HHHH-HHccCcccccCCCCHHHH
Confidence 5554 456877777779988775
No 383
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.26 E-value=0.0012 Score=67.39 Aligned_cols=37 Identities=27% Similarity=0.433 Sum_probs=32.8
Q ss_pred CCCCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 430 NSLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 430 n~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
|-++||.......+..+||||.|||+.-+++|+.|.+
T Consensus 183 NYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFe 219 (592)
T KOG0575|consen 183 NYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFE 219 (592)
T ss_pred cccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcc
Confidence 5688998887777888999999999999999999955
No 384
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=96.20 E-value=0.0034 Score=63.07 Aligned_cols=35 Identities=26% Similarity=0.429 Sum_probs=30.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|+|||||++.|++||+.|..
T Consensus 203 ~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred cCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 45787766778889999999999999999999953
No 385
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.18 E-value=0.00066 Score=71.02 Aligned_cols=17 Identities=29% Similarity=0.167 Sum_probs=10.1
Q ss_pred hhhCCCCCcEEEeeCcc
Q 009771 295 EIVNLKNLTSLSLGGNK 311 (526)
Q Consensus 295 ~l~~~~~L~~L~l~~n~ 311 (526)
...++++++.+.+..+.
T Consensus 357 ~~~~~~~l~~~~l~~~~ 373 (482)
T KOG1947|consen 357 ILRSCPKLTDLSLSYCG 373 (482)
T ss_pred HHhcCCCcchhhhhhhh
Confidence 34556666666666555
No 386
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=96.18 E-value=0.00076 Score=67.36 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=27.0
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.... ...+.++|||||||+++|+++|+.|.
T Consensus 184 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf 218 (345)
T cd07877 184 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 218 (345)
T ss_pred cCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 34665433 35678899999999999999999884
No 387
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=96.13 E-value=0.00016 Score=70.20 Aligned_cols=133 Identities=19% Similarity=0.146 Sum_probs=69.7
Q ss_pred CCccceeecccccCCCCCc-hh-hhCCCCCcEEEeeCcc-CcCCCCCCC-CCCCcccEEECCCCcCC--CCCcccccCCC
Q 009771 275 LTNIEYLSLGFNRFNGSIP-RE-IVNLKNLTSLSLGGNK-LTGHIPSTL-GRLTSLQILDLSSNQLH--SSIPLVIGNFS 348 (526)
Q Consensus 275 ~~~L~~L~L~~n~l~g~~p-~~-l~~~~~L~~L~l~~n~-l~~~~p~~l-~~l~~L~~L~Ls~n~l~--~~~~~~~~~l~ 348 (526)
+..|+.++.+++...+..+ .. -.++.+|+.+-++.++ |+..--..+ .+.++|+.+++..+... +.+...-.+++
T Consensus 293 c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~ 372 (483)
T KOG4341|consen 293 CHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCP 372 (483)
T ss_pred hhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCc
Confidence 4455555555543221111 11 1335566666666655 221111111 23456777776666542 12333335677
Q ss_pred CCCeecCcCCcCc-cc----CcccccCCCCCCEEecCCCcC-cccchHHhhcCcCCCEEEccCCc
Q 009771 349 ALSYLDLSDNRIC-GI----IPDELTKLSHLKYLNLSSNLL-SGQIPFAIGKLFNLASLDLSKNK 407 (526)
Q Consensus 349 ~L~~L~L~~n~l~-~~----~~~~~~~l~~L~~L~L~~n~l-~~~~~~~~~~~~~L~~L~l~~n~ 407 (526)
.|+.|.++++... +. ....-.....|+.+.|+++.. ++..-..+..+++|+.+++-++.
T Consensus 373 ~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 373 RLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred hhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 7788877776432 21 011223456777888888764 34445566778888888776654
No 388
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=96.12 E-value=0.0022 Score=63.59 Aligned_cols=35 Identities=26% Similarity=0.449 Sum_probs=27.8
Q ss_pred CCchhcc-----cccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAH-----TMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~-----~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||+.. ....+.++|||||||++.|+++|+.|..
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~ 209 (332)
T cd05623 170 ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFY 209 (332)
T ss_pred cCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCC
Confidence 4566553 2346789999999999999999999953
No 389
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.08 E-value=0.0038 Score=64.77 Aligned_cols=74 Identities=20% Similarity=0.368 Sum_probs=46.7
Q ss_pred ccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHH-HHHHHHHHhcCCCCCCCCC
Q 009771 442 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDI-ILVSTIAFACLSSQPKSRP 520 (526)
Q Consensus 442 ~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~la~~C~~~~p~~RP 520 (526)
.-...|+|||||...||.|||.|...+.+-...++.-+.. .+.|.+ .+++ .+.-..-+.|-+++|.+||
T Consensus 755 YG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmy--KvHP~i--------Peelsaeak~FilrcFepd~~~R~ 824 (1226)
T KOG4279|consen 755 YGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMY--KVHPPI--------PEELSAEAKNFILRCFEPDPCDRP 824 (1226)
T ss_pred CCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcce--ecCCCC--------cHHHHHHHHHHHHHHcCCCcccCc
Confidence 3456899999999999999999954333222122211100 011222 2333 3344667899999999999
Q ss_pred Ccccc
Q 009771 521 TMQRI 525 (526)
Q Consensus 521 ~m~~v 525 (526)
+.++.
T Consensus 825 sA~~L 829 (1226)
T KOG4279|consen 825 SAKDL 829 (1226)
T ss_pred cHHHh
Confidence 98875
No 390
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=96.05 E-value=0.0022 Score=59.17 Aligned_cols=73 Identities=21% Similarity=0.314 Sum_probs=45.0
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc---CCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
+...++|||||||-+.|+.||+-|...-. ..+. .+..+++ |.+.... ... ....+....|+..++.
T Consensus 270 kYDiRaDVWSlGITlveLaTg~yPy~~c~----tdFe--~ltkvln~ePP~L~~~~-gFS----p~F~~fv~~CL~kd~r 338 (391)
T KOG0983|consen 270 KYDIRADVWSLGITLVELATGQYPYKGCK----TDFE--VLTKVLNEEPPLLPGHM-GFS----PDFQSFVKDCLTKDHR 338 (391)
T ss_pred ccchhhhhhhhccchhhhhcccCCCCCCC----ccHH--HHHHHHhcCCCCCCccc-CcC----HHHHHHHHHHhhcCcc
Confidence 45667999999999999999999954200 0110 1222333 3333221 111 1233556789999999
Q ss_pred CCCCccc
Q 009771 518 SRPTMQR 524 (526)
Q Consensus 518 ~RP~m~~ 524 (526)
+||.-.+
T Consensus 339 ~RP~Y~~ 345 (391)
T KOG0983|consen 339 KRPKYNK 345 (391)
T ss_pred cCcchHH
Confidence 9997544
No 391
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=96.00 E-value=0.0012 Score=70.09 Aligned_cols=86 Identities=12% Similarity=0.142 Sum_probs=45.3
Q ss_pred cccccccccccceeeeehhcCCCCCccc-cccc----cccCCCccccccccCCCCCCccc---chHHHHHHHHHHHHhcC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELL-SSLS----SSSGPKIMLINVLDQRLSPPVNQ---KIVQDIILVSTIAFACL 512 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~-~~~~----~~~~~~~~~~~~~d~~l~~~~~~---~~~~~~~~~~~la~~C~ 512 (526)
....|+|||||||+++|++++..|.+.. ..+. ........+...++++..+.... .....-....++--.|+
T Consensus 355 ~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 355 NLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 4567889999999999999988775421 1110 00000000111122211100000 00000111236778899
Q ss_pred CCCCCCCCCccccC
Q 009771 513 SSQPKSRPTMQRIS 526 (526)
Q Consensus 513 ~~~p~~RP~m~~v~ 526 (526)
+.+|++||++.|++
T Consensus 435 ~~dP~kR~ta~e~L 448 (566)
T PLN03225 435 RFKGRQRISAKAAL 448 (566)
T ss_pred cCCcccCCCHHHHh
Confidence 99999999998874
No 392
>PHA03210 serine/threonine kinase US3; Provisional
Probab=95.96 E-value=0.0013 Score=69.09 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=27.3
Q ss_pred CchhcccccccccccccccceeeeehhcCCCC
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
.||.......+.++|||||||+++|+++|+.|
T Consensus 336 aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 336 SPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred CchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 57777666788999999999999999998754
No 393
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=95.96 E-value=0.002 Score=61.53 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=29.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||+......+.++|+|||||++.|+++|+.|..
T Consensus 176 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 210 (264)
T cd06653 176 MSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWA 210 (264)
T ss_pred cCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 35676665667889999999999999999999953
No 394
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=95.93 E-value=0.0027 Score=63.32 Aligned_cols=34 Identities=24% Similarity=0.372 Sum_probs=27.2
Q ss_pred Cchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 433 NGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 433 ~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
.||.... ...+.++|+||+||+++|+++|+.|..
T Consensus 183 aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 217 (343)
T cd07880 183 APEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK 217 (343)
T ss_pred CHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4665443 357788999999999999999999853
No 395
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=95.89 E-value=0.0022 Score=64.91 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=30.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|+|||||+++|++||+.|..
T Consensus 215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~ 249 (377)
T cd05629 215 IAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFC 249 (377)
T ss_pred cCHHHHccCCCCCceeeEecchhhhhhhcCCCCCC
Confidence 45787766678899999999999999999999953
No 396
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=95.88 E-value=0.0017 Score=65.29 Aligned_cols=35 Identities=26% Similarity=0.446 Sum_probs=30.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||+......+.++|+|||||++.|+++|+.|..
T Consensus 206 ~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 206 IAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred cCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence 45777766678899999999999999999999954
No 397
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=95.88 E-value=0.0028 Score=64.27 Aligned_cols=35 Identities=29% Similarity=0.457 Sum_probs=29.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++||||+||++.|++||+.|..
T Consensus 215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~ 249 (382)
T cd05625 215 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFL 249 (382)
T ss_pred CCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCC
Confidence 45777766677889999999999999999999954
No 398
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.81 E-value=0.00033 Score=64.50 Aligned_cols=101 Identities=25% Similarity=0.302 Sum_probs=70.2
Q ss_pred CCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCC
Q 009771 124 LSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESL 203 (526)
Q Consensus 124 l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l 203 (526)
+.+.+.|+..++.++.. ....+|+.|++|.|+-|.++..- .+..+++|++|.|..|.|...- .+ ..+.++
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~I~sld-----EL-~YLknl 87 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNCIESLD-----EL-EYLKNL 87 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccch--hHHHHHHHHHHHHHhcccccHH-----HH-HHHhcC
Confidence 45667788888887743 33457899999999999887443 4667888999999988876321 11 146778
Q ss_pred CCCCEEEccCCcCCCcCchh-----hcCcCccCccc
Q 009771 204 RNLQWLDLSSNKLSGTIPKE-----IGSLRNLKELD 234 (526)
Q Consensus 204 ~~L~~L~l~~n~l~~~~p~~-----l~~l~~L~~L~ 234 (526)
++|+.|.|..|.-.|.-+.. +.-+++|+.||
T Consensus 88 psLr~LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 88 PSLRTLWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred chhhhHhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 88888888888777665532 34456666554
No 399
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=95.79 E-value=0.0031 Score=62.54 Aligned_cols=35 Identities=26% Similarity=0.453 Sum_probs=27.7
Q ss_pred CCchhccc-----ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-----MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-----~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||+... ...+.++|+|||||+++|++||+.|..
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~ 209 (331)
T cd05624 170 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred CCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCcc
Confidence 45665543 346788999999999999999999953
No 400
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=95.68 E-value=0.0031 Score=63.64 Aligned_cols=35 Identities=26% Similarity=0.492 Sum_probs=27.4
Q ss_pred CCchhcccc----cccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTM----VVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~----~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||..... ..+.++|+||+||++.|++||+.|..
T Consensus 210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~ 248 (370)
T cd05621 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 248 (370)
T ss_pred CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCC
Confidence 446655332 36789999999999999999999953
No 401
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.68 E-value=0.0046 Score=33.91 Aligned_cols=18 Identities=50% Similarity=0.768 Sum_probs=8.5
Q ss_pred CCEEEccCccCCccCCccc
Q 009771 127 LTYIYLYENNLTGTIPKEI 145 (526)
Q Consensus 127 L~~L~Ls~n~~~~~ip~~l 145 (526)
|++|+|++|+++ .+|+.|
T Consensus 2 L~~Ldls~n~l~-~ip~~~ 19 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSF 19 (22)
T ss_dssp ESEEEETSSEES-EEGTTT
T ss_pred ccEEECCCCcCE-eCChhh
Confidence 445555555444 444443
No 402
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.62 E-value=0.0038 Score=64.70 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=30.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
+.||.......+...|.|+|||++.||+.|+.|.
T Consensus 535 ~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF 568 (694)
T KOG0694|consen 535 LAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPF 568 (694)
T ss_pred cChhhhccCcccchhhHHHHHHHHHHHHcCCCCC
Confidence 4588888889999999999999999999999993
No 403
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=95.43 E-value=0.0036 Score=63.14 Aligned_cols=35 Identities=26% Similarity=0.450 Sum_probs=27.2
Q ss_pred CCchhccc----ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT----MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~----~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|+|||||++.|+++|+.|..
T Consensus 210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~ 248 (371)
T cd05622 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 248 (371)
T ss_pred cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCC
Confidence 34665432 236789999999999999999999954
No 404
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=95.41 E-value=0.0022 Score=65.66 Aligned_cols=81 Identities=20% Similarity=0.310 Sum_probs=47.3
Q ss_pred chhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCC
Q 009771 434 GKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLS 513 (526)
Q Consensus 434 ~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~ 513 (526)
||... ....+..||||||+=+|||+|+.-|+-- ...+.. +=.-|-..+.|..... ..-.+|-++--.|+.
T Consensus 213 PEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE------C~n~AQ-IYKKV~SGiKP~sl~k--V~dPevr~fIekCl~ 282 (632)
T KOG0584|consen 213 PEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE------CTNPAQ-IYKKVTSGIKPAALSK--VKDPEVREFIEKCLA 282 (632)
T ss_pred hHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh------hCCHHH-HHHHHHcCCCHHHhhc--cCCHHHHHHHHHHhc
Confidence 45444 5789999999999999999999999431 111100 0001111121110000 011234456678999
Q ss_pred CCCCCCCCcccc
Q 009771 514 SQPKSRPTMQRI 525 (526)
Q Consensus 514 ~~p~~RP~m~~v 525 (526)
. .++||+..|.
T Consensus 283 ~-~~~R~sa~eL 293 (632)
T KOG0584|consen 283 T-KSERLSAKEL 293 (632)
T ss_pred C-chhccCHHHH
Confidence 9 9999998774
No 405
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=95.39 E-value=0.0058 Score=67.84 Aligned_cols=21 Identities=38% Similarity=0.763 Sum_probs=19.4
Q ss_pred cccccccceeeeehhcCCCCC
Q 009771 445 KCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 445 k~dvysfGv~llElltg~~P~ 465 (526)
+.||||.|||.+||+|||+|.
T Consensus 1421 A~DiWslGCVVlEM~tGkrPW 1441 (1509)
T KOG4645|consen 1421 AADIWSLGCVVLEMATGKRPW 1441 (1509)
T ss_pred chhhhcccceEEEeecCCCch
Confidence 469999999999999999994
No 406
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.36 E-value=0.0059 Score=33.47 Aligned_cols=20 Identities=55% Similarity=0.813 Sum_probs=11.0
Q ss_pred CCCEEEccCCCCCCCCccccC
Q 009771 150 NLEVLDLGSNNLNGTIPIEIG 170 (526)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~l~ 170 (526)
+|++|||++|+++ .+|..|+
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp TESEEEETSSEES-EEGTTTT
T ss_pred CccEEECCCCcCE-eCChhhc
Confidence 3556666666655 5555444
No 407
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=95.33 E-value=0.0039 Score=63.88 Aligned_cols=81 Identities=25% Similarity=0.357 Sum_probs=58.9
Q ss_pred CCchhcccccccccccccccceeeeehh-cCCCCCccccccccccCCCcccccccc--CCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEIL-MGRHPGELLSSLSSSSGPKIMLINVLD--QRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEll-tg~~P~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~la 508 (526)
++||.....+.+..+|||=|||-.+|++ -|.+|... +.... +...+. .|+ +.+..|...+..+.
T Consensus 559 maPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg----vkNsD----VI~~iEnGeRl-----P~P~nCPp~LYslm 625 (974)
T KOG4257|consen 559 MAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG----VKNSD----VIGHIENGERL-----PCPPNCPPALYSLM 625 (974)
T ss_pred cCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc----ccccc----eEEEecCCCCC-----CCCCCCChHHHHHH
Confidence 5688888889999999999999999988 59999542 22211 122222 233 22345667777899
Q ss_pred HhcCCCCCCCCCCcccc
Q 009771 509 FACLSSQPKSRPTMQRI 525 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v 525 (526)
-.|++.+|.+||...|+
T Consensus 626 skcWayeP~kRPrftei 642 (974)
T KOG4257|consen 626 SKCWAYEPSKRPRFTEI 642 (974)
T ss_pred HHHhccCcccCCcHHHH
Confidence 99999999999998764
No 408
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=95.27 E-value=0.0086 Score=57.88 Aligned_cols=32 Identities=22% Similarity=0.461 Sum_probs=28.3
Q ss_pred CchhcccccccccccccccceeeeehhcCCCC
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
.||..-+...+..|||||+||++.|+-||..-
T Consensus 277 APEViLgLGwS~pCDvWSiGCIL~ElytG~~L 308 (415)
T KOG0671|consen 277 APEVILGLGWSQPCDVWSIGCILVELYTGETL 308 (415)
T ss_pred CchheeccCcCCccCceeeeeEEEEeecccee
Confidence 47888888899999999999999999999863
No 409
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=95.26 E-value=0.00077 Score=65.65 Aligned_cols=205 Identities=20% Similarity=0.107 Sum_probs=104.1
Q ss_pred CcCccCcccccccc-cCCC-CchhhhcCcCCCeeecccccCCCC--CCccccCCCccceeecccc-cCCCCC-chhhhCC
Q 009771 226 SLRNLKELDLSSNK-LGGV-LPQEIENLKSLTALSMDANNLGGP--IPSTLFRLTNIEYLSLGFN-RFNGSI-PREIVNL 299 (526)
Q Consensus 226 ~l~~L~~L~l~~n~-l~~~-~p~~l~~l~~L~~L~l~~n~l~~~--~p~~l~~~~~L~~L~L~~n-~l~g~~-p~~l~~~ 299 (526)
.+++|++++++++. +++. +-....++..++.+.+.++.-.+. +-..-+.+.-+.++++..+ .++..- -..-..+
T Consensus 214 gC~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c 293 (483)
T KOG4341|consen 214 GCRKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGC 293 (483)
T ss_pred hhhhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhh
Confidence 45566666666652 2221 112233444555555544321110 0000112233445555444 233221 1112346
Q ss_pred CCCcEEEeeCccCcCCC--CCCCCCCCcccEEECCCCcC-CCCCcc-cccCCCCCCeecCcCCcCcc--cCcccccCCCC
Q 009771 300 KNLTSLSLGGNKLTGHI--PSTLGRLTSLQILDLSSNQL-HSSIPL-VIGNFSALSYLDLSDNRICG--IIPDELTKLSH 373 (526)
Q Consensus 300 ~~L~~L~l~~n~l~~~~--p~~l~~l~~L~~L~Ls~n~l-~~~~~~-~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~ 373 (526)
..|+.++.+++...+.. -.--.+..+|+.+.++.++- +..-.. .-.+++.|+.+++.++...- .+..--.+++.
T Consensus 294 ~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~ 373 (483)
T KOG4341|consen 294 HALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPR 373 (483)
T ss_pred hHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCch
Confidence 78888888887653221 11124567899999988873 221111 12567888888888874321 12222245788
Q ss_pred CCEEecCCCcC-cccc----hHHhhcCcCCCEEEccCCcCcc-cccccccCCCCCCeEEcCCC
Q 009771 374 LKYLNLSSNLL-SGQI----PFAIGKLFNLASLDLSKNKLSG-SIPTEIGNCSELRNLTLNHN 430 (526)
Q Consensus 374 L~~L~L~~n~l-~~~~----~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~l~l~~n 430 (526)
|+.+.++++.. ++.. ...-..+..|+.+.++++.... ..-..+..++.|+.+++-.+
T Consensus 374 lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~ 436 (483)
T KOG4341|consen 374 LRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDC 436 (483)
T ss_pred hccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeech
Confidence 88888887764 2221 1122345567777777776543 23344556666766665544
No 410
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=95.20 E-value=0.0031 Score=64.13 Aligned_cols=88 Identities=15% Similarity=0.160 Sum_probs=53.8
Q ss_pred chhcccccccccccccccceeeeehh--cCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 434 GKLAHTMVVTEKCDVYSFGVVALEIL--MGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 434 ~~~~~~~~~~~k~dvysfGv~llEll--tg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
+|..-..+.|+++|||.|||.+.|++ ...+|...+.... ..+. ..+.++..=.......+..|..++.++.+.|
T Consensus 708 wEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven-~~~~~~~~~~~~~l~~P~~cp~~lyelml~C 783 (807)
T KOG1094|consen 708 WESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVEN-AGEFFRDQGRQVVLSRPPACPQGLYELMLRC 783 (807)
T ss_pred HHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHh-hhhhcCCCCcceeccCCCcCcHHHHHHHHHH
Confidence 44445568899999999999999987 4677744321110 0000 1111111100000122234667788999999
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
...+.++||+++++
T Consensus 784 w~~es~~RPsFe~l 797 (807)
T KOG1094|consen 784 WRRESEQRPSFEQL 797 (807)
T ss_pred hchhhhcCCCHHHH
Confidence 99999999999875
No 411
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.16 E-value=0.005 Score=62.42 Aligned_cols=83 Identities=17% Similarity=0.298 Sum_probs=50.6
Q ss_pred CchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCcc-ccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIM-LINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
.||....-..-.|.||||+||+++||+-|..|.-.- ..+...+ +..-=-+.+... +....+.. +.-..|
T Consensus 437 APEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE-----~PlrAlyLIa~ng~P~lk~~--~klS~~~k---dFL~~c 506 (550)
T KOG0578|consen 437 APEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE-----NPLRALYLIATNGTPKLKNP--EKLSPELK---DFLDRC 506 (550)
T ss_pred chhhhhhcccCccccchhhhhHHHHHhcCCCCccCC-----ChHHHHHHHhhcCCCCcCCc--cccCHHHH---HHHHHH
Confidence 466666666788999999999999999999996431 1111111 111111222211 11112222 445689
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
+..+|++||+..|.
T Consensus 507 L~~dv~~RasA~eL 520 (550)
T KOG0578|consen 507 LVVDVEQRASAKEL 520 (550)
T ss_pred hhcchhcCCCHHHH
Confidence 99999999998875
No 412
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.15 E-value=0.0017 Score=67.83 Aligned_cols=16 Identities=25% Similarity=0.204 Sum_probs=9.1
Q ss_pred ccCCCCCCeecCcCCc
Q 009771 344 IGNFSALSYLDLSDNR 359 (526)
Q Consensus 344 ~~~l~~L~~L~L~~n~ 359 (526)
...+++++.+.+..+.
T Consensus 358 ~~~~~~l~~~~l~~~~ 373 (482)
T KOG1947|consen 358 LRSCPKLTDLSLSYCG 373 (482)
T ss_pred HhcCCCcchhhhhhhh
Confidence 3455666666665555
No 413
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=95.10 E-value=0.0083 Score=60.02 Aligned_cols=85 Identities=14% Similarity=0.240 Sum_probs=55.2
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..+||........+|+|+||+||.+.|+.+=|++.... .... .+..++-....+.. .....++. .+--.
T Consensus 172 YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~------~m~~-Li~ki~~~~~~Plp-~~ys~el~---~lv~~ 240 (426)
T KOG0589|consen 172 YMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS------NMSE-LILKINRGLYSPLP-SMYSSELR---SLVKS 240 (426)
T ss_pred ccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc------chHH-HHHHHhhccCCCCC-ccccHHHH---HHHHH
Confidence 46789999999999999999999999999999874320 0000 11112111122211 22334444 44457
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|+.||+..|++
T Consensus 241 ~l~~~P~~RPsa~~LL 256 (426)
T KOG0589|consen 241 MLRKNPEHRPSALELL 256 (426)
T ss_pred HhhcCCccCCCHHHHh
Confidence 8999999999988764
No 414
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=95.05 E-value=0.00019 Score=73.79 Aligned_cols=84 Identities=25% Similarity=0.279 Sum_probs=45.4
Q ss_pred CCCEEeCCCCCCCCC----CchhccCCCCCCEEEccCccCCccCC----cccCCC-CCCCEEEccCCCCCCC----Cccc
Q 009771 102 NLQYLDLGSNNLSGS----IPSQIDSLSNLTYIYLYENNLTGTIP----KEIGSL-RNLEVLDLGSNNLNGT----IPIE 168 (526)
Q Consensus 102 ~L~~L~l~~n~~~~~----~p~~l~~l~~L~~L~Ls~n~~~~~ip----~~l~~l-~~L~~L~L~~n~l~~~----~p~~ 168 (526)
.+..|.|.+|.+... +-..+.....|..|++++|.+.+.-- ..+... ..|++|++..|.+++. +...
T Consensus 88 ~l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~ 167 (478)
T KOG4308|consen 88 SLLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAV 167 (478)
T ss_pred hHHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHH
Confidence 366677777766543 22345566777777777776653211 111221 4455566666655532 3334
Q ss_pred cCCCCCCCEEEccCCcC
Q 009771 169 IGSVRNLETLSLDGNKL 185 (526)
Q Consensus 169 l~~l~~L~~L~L~~n~l 185 (526)
+.....++.++++.|.+
T Consensus 168 L~~~~~l~~l~l~~n~l 184 (478)
T KOG4308|consen 168 LEKNEHLTELDLSLNGL 184 (478)
T ss_pred HhcccchhHHHHHhccc
Confidence 44455566666666654
No 415
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=95.02 E-value=0.007 Score=54.76 Aligned_cols=51 Identities=24% Similarity=0.400 Sum_probs=40.9
Q ss_pred Cchhcccc-cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 433 NGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 433 ~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
.||..... ..+.+.|+|++|++++|+ ..+.++...|
T Consensus 161 ~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~~~~~l~~~ 197 (215)
T cd00180 161 APEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PELKDLIRKM 197 (215)
T ss_pred ChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HHHHHHHHHH
Confidence 35555444 667889999999999988 3455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.+++
T Consensus 198 l~~~p~~R~~~~~l~ 212 (215)
T cd00180 198 LQKDPEKRPSAKEIL 212 (215)
T ss_pred hhCCcccCcCHHHHh
Confidence 999999999998864
No 416
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.34 E-value=0.01 Score=59.42 Aligned_cols=84 Identities=18% Similarity=0.208 Sum_probs=49.8
Q ss_pred CCchhccccc-c-cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMV-V-TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~-~-~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||...... . ..+.||||+||++..|++|+-|.+.. ..+.. ...+......- ....+ -.++..+.-
T Consensus 188 ~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~------~~~~l-~~ki~~~~~~~---p~~~~-S~~~~~Li~ 256 (370)
T KOG0583|consen 188 AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS------NVPNL-YRKIRKGEFKI---PSYLL-SPEARSLIE 256 (370)
T ss_pred CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc------cHHHH-HHHHhcCCccC---CCCcC-CHHHHHHHH
Confidence 3466555433 3 46799999999999999999996541 00000 00111111100 00000 233456778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|...+|.+|+++.|++
T Consensus 257 ~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 257 KMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHcCCCcccCCCHHHHh
Confidence 89999999999998863
No 417
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.02 E-value=0.00069 Score=69.73 Aligned_cols=144 Identities=27% Similarity=0.291 Sum_probs=84.5
Q ss_pred CcCCCCCCCEEeCCCCCCCCCC----chhccCC-CCCCEEEccCccCCcc----CCcccCCCCCCCEEEccCCCCCC---
Q 009771 96 NFSCFPNLQYLDLGSNNLSGSI----PSQIDSL-SNLTYIYLYENNLTGT----IPKEIGSLRNLEVLDLGSNNLNG--- 163 (526)
Q Consensus 96 ~~~~l~~L~~L~l~~n~~~~~~----p~~l~~l-~~L~~L~Ls~n~~~~~----ip~~l~~l~~L~~L~L~~n~l~~--- 163 (526)
.+...+.|..|+++.|.+.+.- -..+... ..|++|++..|.+++. +.+.+.....++.++++.|.+..
T Consensus 110 ~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~ 189 (478)
T KOG4308|consen 110 ALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGL 189 (478)
T ss_pred HhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhh
Confidence 4566789999999999987541 1223333 6678899999887653 55667778999999999998741
Q ss_pred -CCccccC----CCCCCCEEEccCCcCCccCCcccccCcccccCCCC-CCEEEccCCcCCCcC----chhhcCc-CccCc
Q 009771 164 -TIPIEIG----SVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRN-LQWLDLSSNKLSGTI----PKEIGSL-RNLKE 232 (526)
Q Consensus 164 -~~p~~l~----~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~-L~~L~l~~n~l~~~~----p~~l~~l-~~L~~ 232 (526)
.++..+. ...++++|++.+|.++.. ....+...+...+. +..|++..|.+.+.. .+.+..+ .++++
T Consensus 190 ~~l~~~l~~~~~~~~~le~L~L~~~~~t~~---~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~ 266 (478)
T KOG4308|consen 190 LVLSQALESAASPLSSLETLKLSRCGVTSS---SCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRV 266 (478)
T ss_pred HHHhhhhhhhhcccccHHHHhhhhcCcChH---HHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhh
Confidence 1223333 356677777777766521 11111222233333 445666666655331 1222233 34455
Q ss_pred ccccccccCC
Q 009771 233 LDLSSNKLGG 242 (526)
Q Consensus 233 L~l~~n~l~~ 242 (526)
++++.|.++.
T Consensus 267 l~l~~nsi~~ 276 (478)
T KOG4308|consen 267 LDLSRNSITE 276 (478)
T ss_pred hhhhcCCccc
Confidence 5555555543
No 418
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=93.95 E-value=0.028 Score=51.91 Aligned_cols=74 Identities=23% Similarity=0.420 Sum_probs=44.7
Q ss_pred cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCCCc
Q 009771 443 TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPTM 522 (526)
Q Consensus 443 ~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m 522 (526)
-+.+|.|||.|++.|+.|+..|...+....-. -+. ..+-+...+.+ ..... |-++.-.|..++|.+||.+
T Consensus 367 ~raadmwsfaillwel~trevpfadlspmecg--mki-aleglrv~ipp----gis~h---m~klm~icmnedpgkrpkf 436 (448)
T KOG0195|consen 367 IRAADMWSFAILLWELNTREVPFADLSPMECG--MKI-ALEGLRVHIPP----GISRH---MNKLMNICMNEDPGKRPKF 436 (448)
T ss_pred hhhhhHHHHHHHHHHhhccccccccCCchhhh--hhh-hhccccccCCC----CccHH---HHHHHHHHhcCCCCcCCCc
Confidence 45689999999999999999994332211000 000 11222233322 12222 3455667999999999998
Q ss_pred cccC
Q 009771 523 QRIS 526 (526)
Q Consensus 523 ~~v~ 526 (526)
..||
T Consensus 437 dmiv 440 (448)
T KOG0195|consen 437 DMIV 440 (448)
T ss_pred ceeh
Confidence 7664
No 419
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=93.89 E-value=0.016 Score=53.47 Aligned_cols=75 Identities=23% Similarity=0.290 Sum_probs=45.5
Q ss_pred ccccccccccceeeeehhcCCCCCccccccccccCCCccccccc--cC-CCCCCcccchHHHHHHHHHHHHhcCCCCCCC
Q 009771 442 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL--DQ-RLSPPVNQKIVQDIILVSTIAFACLSSQPKS 518 (526)
Q Consensus 442 ~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~--d~-~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~ 518 (526)
...++||||+||.+.|+.||+.|.. +|... +. ++..++ |+ .+..+. ...+--.++...--.|+--+-++
T Consensus 246 yDiRSDvWSLGITL~EvAtG~fPyr---~w~sv-fe--ql~~Vv~gdpp~l~~~~--~~~~~s~~~~~fintCl~Kd~~~ 317 (361)
T KOG1006|consen 246 YDIRSDVWSLGITLYEVATGNFPYR---KWDSV-FE--QLCQVVIGDPPILLFDK--ECVHYSFSMVRFINTCLIKDRSD 317 (361)
T ss_pred cchhhhhhhhcceEeeeecCCCCcc---hHHHH-HH--HHHHHHcCCCCeecCcc--cccccCHHHHHHHHHHhhccccc
Confidence 5678999999999999999999964 34221 10 122222 22 222111 11112234555566799999999
Q ss_pred CCCccc
Q 009771 519 RPTMQR 524 (526)
Q Consensus 519 RP~m~~ 524 (526)
||+-.+
T Consensus 318 Rpky~~ 323 (361)
T KOG1006|consen 318 RPKYDD 323 (361)
T ss_pred Ccchhh
Confidence 998654
No 420
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=93.80 E-value=0.041 Score=56.97 Aligned_cols=30 Identities=17% Similarity=0.360 Sum_probs=27.4
Q ss_pred CchhcccccccccccccccceeeeehhcCC
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILMGR 462 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llElltg~ 462 (526)
+||..-+....++.|+|||||++-||.||.
T Consensus 356 APEVILGlpY~~~IDmWSLGCIlAEL~tG~ 385 (586)
T KOG0667|consen 356 APEVILGLPYDTAIDMWSLGCILAELFTGE 385 (586)
T ss_pred cchhhccCCCCCccceeehhhhHHhHhcCc
Confidence 378888889999999999999999999995
No 421
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=93.58 E-value=0.016 Score=64.13 Aligned_cols=83 Identities=22% Similarity=0.266 Sum_probs=44.3
Q ss_pred chhcccc---cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 434 GKLAHTM---VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 434 ~~~~~~~---~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
||..... +.++|.|.||.|||+.||+.-..+... +-. .+.+.-+..+..+. +....++..-.++--.
T Consensus 784 PEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsME-Ra~--------iL~~LR~g~iP~~~-~f~~~~~~~e~slI~~ 853 (1351)
T KOG1035|consen 784 PELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSME-RAS--------ILTNLRKGSIPEPA-DFFDPEHPEEASLIRW 853 (1351)
T ss_pred HHHhcccccccccchhhhHHHHHHHHHHhccCCchHH-HHH--------HHHhcccCCCCCCc-ccccccchHHHHHHHH
Confidence 5554333 589999999999999999964222111 000 11112222222210 1111222222233334
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
=++++|.+|||..|++
T Consensus 854 Ll~hdP~kRPtA~eLL 869 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELL 869 (1351)
T ss_pred HhcCCCccCCCHHHHh
Confidence 4789999999988753
No 422
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=93.17 E-value=0.038 Score=59.03 Aligned_cols=74 Identities=18% Similarity=0.324 Sum_probs=49.3
Q ss_pred ccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 438 HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 438 ~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
....+.+|+|+|.+||++.-+.-..+|.+.-.. ..|++..-.-+..+...+++. .|-..|++++|+
T Consensus 231 sg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-----------laIlng~Y~~P~~p~ys~~l~---~LI~~mL~~nP~ 296 (738)
T KOG1989|consen 231 SGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-----------LAILNGNYSFPPFPNYSDRLK---DLIRTMLQPNPD 296 (738)
T ss_pred cCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-----------eeEEeccccCCCCccHHHHHH---HHHHHHhccCcc
Confidence 345689999999999999999999999653211 112222211111123344444 556689999999
Q ss_pred CCCCcccc
Q 009771 518 SRPTMQRI 525 (526)
Q Consensus 518 ~RP~m~~v 525 (526)
+||++-+|
T Consensus 297 ~RPnI~Qv 304 (738)
T KOG1989|consen 297 ERPNIYQV 304 (738)
T ss_pred cCCCHHHH
Confidence 99998776
No 423
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=92.47 E-value=0.13 Score=50.52 Aligned_cols=21 Identities=38% Similarity=0.654 Sum_probs=19.7
Q ss_pred ccccccccceeeeehhcCCCC
Q 009771 444 EKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 444 ~k~dvysfGv~llElltg~~P 464 (526)
.|.|+||.|||+.-+++|-.|
T Consensus 360 ~kVDiWSlGcvLfvcLsG~pP 380 (475)
T KOG0615|consen 360 SKVDIWSLGCVLFVCLSGYPP 380 (475)
T ss_pred chheeeeccceEEEEeccCCC
Confidence 477999999999999999999
No 424
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=91.68 E-value=0.0035 Score=56.44 Aligned_cols=89 Identities=19% Similarity=0.221 Sum_probs=61.7
Q ss_pred CCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCC
Q 009771 95 LNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRN 174 (526)
Q Consensus 95 ~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 174 (526)
..+..+...+.||++.|++.. +-..+..++.|..|+++.|.+. -.|..++.+..++.+++..|..+ ..|.+++..++
T Consensus 36 ~ei~~~kr~tvld~~s~r~vn-~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~ 112 (326)
T KOG0473|consen 36 REIASFKRVTVLDLSSNRLVN-LGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPH 112 (326)
T ss_pred hhhhccceeeeehhhhhHHHh-hccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCC
Confidence 345566677778887776542 2334555677777888877776 56777777777777777777765 66777777777
Q ss_pred CCEEEccCCcCC
Q 009771 175 LETLSLDGNKLS 186 (526)
Q Consensus 175 L~~L~L~~n~l~ 186 (526)
++++++-+|.|.
T Consensus 113 ~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 113 PKKNEQKKTEFF 124 (326)
T ss_pred cchhhhccCcch
Confidence 777777777654
No 425
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=91.66 E-value=0.038 Score=56.04 Aligned_cols=35 Identities=17% Similarity=0.395 Sum_probs=31.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
++||......+...+|+|.|||++.+|+.|+.|..
T Consensus 254 VSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFr 288 (604)
T KOG0592|consen 254 VSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFR 288 (604)
T ss_pred cCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCc
Confidence 45888888888999999999999999999999943
No 426
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=90.22 E-value=0.19 Score=25.47 Aligned_cols=10 Identities=50% Similarity=0.750 Sum_probs=3.1
Q ss_pred CCEEEccCCC
Q 009771 151 LEVLDLGSNN 160 (526)
Q Consensus 151 L~~L~L~~n~ 160 (526)
|+.|+|++|+
T Consensus 3 L~~L~l~~n~ 12 (17)
T PF13504_consen 3 LRTLDLSNNR 12 (17)
T ss_dssp -SEEEETSS-
T ss_pred cCEEECCCCC
Confidence 3333333333
No 427
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=89.67 E-value=0.12 Score=46.05 Aligned_cols=27 Identities=33% Similarity=0.487 Sum_probs=24.5
Q ss_pred cccccccccccceeeeehhcCCCCCcc
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGEL 467 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~ 467 (526)
..+.|+||||+||-..|+.+++.|.+.
T Consensus 228 gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 228 GYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred cceeehhhhhhhhhhhhhhhccccccc
Confidence 568899999999999999999999763
No 428
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=89.61 E-value=0.066 Score=48.77 Aligned_cols=83 Identities=19% Similarity=0.199 Sum_probs=55.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
+.||-.....-..+.|+|+.||+..|.+.|..|...-. -...+.+....+..+|... .. .+..+-..|
T Consensus 189 l~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--~~etYkrI~k~~~~~p~~i-------s~---~a~dlI~~l 256 (281)
T KOG0580|consen 189 LPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--HSETYKRIRKVDLKFPSTI-------SG---GAADLISRL 256 (281)
T ss_pred CCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--hHHHHHHHHHccccCCccc-------Ch---hHHHHHHHH
Confidence 45777777788899999999999999999999954211 1122222223334444221 11 233566789
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
...+|.+|.+-.||+
T Consensus 257 l~~~p~~r~~l~~v~ 271 (281)
T KOG0580|consen 257 LVKNPIERLALTEVM 271 (281)
T ss_pred hccCccccccHHHHh
Confidence 999999999988774
No 429
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=89.21 E-value=0.46 Score=50.98 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=28.7
Q ss_pred CCchhcccccccccccccccceeeeehhcC-CCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMG-RHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg-~~P~~ 466 (526)
..||.....+-+...|+||+|||.+-.+|| +||..
T Consensus 681 ~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG 716 (903)
T KOG1027|consen 681 QAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG 716 (903)
T ss_pred cCHHHHhccccCcccchhhcCceEEEEecCCccCCC
Confidence 347777777777889999999999999987 99943
No 430
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=89.02 E-value=0.15 Score=50.16 Aligned_cols=35 Identities=23% Similarity=0.421 Sum_probs=28.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
+.||...-.......|.|+|||++.||+.|+.|.+
T Consensus 517 iAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFd 551 (683)
T KOG0696|consen 517 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 551 (683)
T ss_pred cccceEEecccccchhHHHHHHHHHHHHcCCCCCC
Confidence 45665554556677899999999999999999954
No 431
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=88.77 E-value=0.27 Score=46.24 Aligned_cols=82 Identities=21% Similarity=0.316 Sum_probs=54.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||..+......+.|+||+||...||.-||.|+..++..- ..+ +-|.-.++...+.++.-...-...-.|
T Consensus 196 MAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR-AIF--------MIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 196 MAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR-AIF--------MIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred ccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc-eeE--------eccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 35888888888999999999999999999999976544321 000 112222332233333334455667789
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
+--.|++|-+.
T Consensus 267 LiK~PE~R~TA 277 (502)
T KOG0574|consen 267 LIKKPEERKTA 277 (502)
T ss_pred hcCCHHHHHHH
Confidence 99999998764
No 432
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=88.76 E-value=0.2 Score=52.42 Aligned_cols=21 Identities=19% Similarity=0.401 Sum_probs=18.6
Q ss_pred cccccccccceeeeehhcCCC
Q 009771 443 TEKCDVYSFGVVALEILMGRH 463 (526)
Q Consensus 443 ~~k~dvysfGv~llElltg~~ 463 (526)
..+.|+||+||+++||++|..
T Consensus 410 ~~~~DvwSlGvil~em~~~~l 430 (507)
T PLN03224 410 PDLFDSYTAGVLLMQMCVPEL 430 (507)
T ss_pred CCccchhhHHHHHHHHHhCCC
Confidence 456899999999999999885
No 433
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=88.69 E-value=0.12 Score=49.92 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=29.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
+.||+......+..+|.||.||++.||+||..|.
T Consensus 192 mAPEil~~~gy~~~vDWWsLGillYeML~G~pPF 225 (357)
T KOG0598|consen 192 MAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPF 225 (357)
T ss_pred cChHHHhcCCCCcccchHhHHHHHHHHhhCCCCC
Confidence 3577777778888999999999999999999994
No 434
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=86.81 E-value=0.16 Score=46.55 Aligned_cols=35 Identities=29% Similarity=0.418 Sum_probs=27.3
Q ss_pred CCchhc-ccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLA-HTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~-~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.. .....+.++|+|+||++++|+++|+.|..
T Consensus 166 ~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 166 LAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred CCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 345554 44456678999999999999999999853
No 435
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=86.80 E-value=0.31 Score=48.86 Aligned_cols=87 Identities=17% Similarity=0.255 Sum_probs=46.9
Q ss_pred ccccccccccccccceeeeehhcCC--CCCcc----cc---cc----ccccCCCc-cccccccCCCCCCcccchH-----
Q 009771 438 HTMVVTEKCDVYSFGVVALEILMGR--HPGEL----LS---SL----SSSSGPKI-MLINVLDQRLSPPVNQKIV----- 498 (526)
Q Consensus 438 ~~~~~~~k~dvysfGv~llElltg~--~P~~~----~~---~~----~~~~~~~~-~~~~~~d~~l~~~~~~~~~----- 498 (526)
.....+.+.|+|+||++..|+.+=| .||.. +- .. ....++.+ .+...+.-+...-. ....
T Consensus 183 rs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~-~~~l~~L~p 261 (538)
T KOG0661|consen 183 RSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVK-PSPLKDLLP 261 (538)
T ss_pred hccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCC-CCChHHhCc
Confidence 3445788899999999999987655 23321 10 00 00111110 11222222221110 1111
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCcccc
Q 009771 499 QDIILVSTIAFACLSSQPKSRPTMQRI 525 (526)
Q Consensus 499 ~~~~~~~~la~~C~~~~p~~RP~m~~v 525 (526)
.+-.+.+++--.|++.||.+|||.+++
T Consensus 262 ~~s~~~~~li~~ll~WDP~kRpTA~~a 288 (538)
T KOG0661|consen 262 NASSEAASLIERLLAWDPDKRPTASQA 288 (538)
T ss_pred ccCHHHHHHHHHHhcCCCccCccHHHH
Confidence 123456677788999999999999875
No 436
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=86.74 E-value=0.39 Score=47.37 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=30.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
+.||...+..-....|.|.|||++.||+.|+.|.
T Consensus 302 lAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPF 335 (459)
T KOG0610|consen 302 LAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPF 335 (459)
T ss_pred ccceeeecCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 5688888778888999999999999999999993
No 437
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.56 E-value=0.13 Score=45.63 Aligned_cols=79 Identities=19% Similarity=0.169 Sum_probs=36.5
Q ss_pred cccEEECCCCcCCCCCcccccCCCCCCeecCcCCcC-cccCccccc-CCCCCCEEecCCC-cCcccchHHhhcCcCCCEE
Q 009771 325 SLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRI-CGIIPDELT-KLSHLKYLNLSSN-LLSGQIPFAIGKLFNLASL 401 (526)
Q Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l-~~~~~~~~~-~l~~L~~L~L~~n-~l~~~~~~~~~~~~~L~~L 401 (526)
.++.+|-++..+..+.-.-+.+++.++.|.+.+|.- .+..-+.++ -.++|+.|++++| +||...-.++..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 345555555555544444445555555555555521 111111111 2345555666554 3444444455555555555
Q ss_pred Ec
Q 009771 402 DL 403 (526)
Q Consensus 402 ~l 403 (526)
++
T Consensus 182 ~l 183 (221)
T KOG3864|consen 182 HL 183 (221)
T ss_pred Hh
Confidence 44
No 438
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=86.06 E-value=0.18 Score=49.51 Aligned_cols=35 Identities=20% Similarity=0.411 Sum_probs=32.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.....+...|.|.||.|+++.|+++|+.|.+
T Consensus 181 MAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 181 MAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred cCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 35899888999999999999999999999999965
No 439
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=85.25 E-value=0.19 Score=52.51 Aligned_cols=33 Identities=24% Similarity=0.421 Sum_probs=25.2
Q ss_pred chhcccccc-cccccccccceeeeehhcCCCCCc
Q 009771 434 GKLAHTMVV-TEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 434 ~~~~~~~~~-~~k~dvysfGv~llElltg~~P~~ 466 (526)
||...+... -.++||||-||++.-++||+-|.+
T Consensus 180 PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd 213 (786)
T KOG0588|consen 180 PEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD 213 (786)
T ss_pred chhhcCCCCCCCccccchhHHHHHHHHhCCCCCC
Confidence 554443322 356999999999999999999955
No 440
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=85.00 E-value=0.42 Score=48.10 Aligned_cols=85 Identities=16% Similarity=0.199 Sum_probs=50.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCC--CCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRL--SPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l--~~~~~~~~~~~~~~~~~la~ 509 (526)
+.||.......+...|+||.||++..|+.|..|...-.... ....+..... ..+.-+...+.+. ..-.
T Consensus 205 ~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~-------~~~~i~~~~~~f~~~~w~~is~~ak---d~i~ 274 (382)
T KOG0032|consen 205 VAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE-------IFLAILRGDFDFTSEPWDDISESAK---DFIR 274 (382)
T ss_pred cCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH-------HHHHHHcCCCCCCCCCccccCHHHH---HHHH
Confidence 34777777788999999999999999999999943211100 0111111111 1000011112222 3445
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.+...+|..|++..+|+
T Consensus 275 ~ll~~dp~~R~ta~~~L 291 (382)
T KOG0032|consen 275 KLLEFDPRKRLTAAQAL 291 (382)
T ss_pred HhcccCcccCCCHHHHh
Confidence 67788899999988763
No 441
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=84.80 E-value=0.033 Score=50.38 Aligned_cols=88 Identities=26% Similarity=0.253 Sum_probs=59.2
Q ss_pred hhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCC
Q 009771 295 EIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHL 374 (526)
Q Consensus 295 ~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 374 (526)
.+....+.+.||++.|++.. .-..|..++.+..|+++.|.+. ..|..++....+..+++.+|..+ ..|.++...+++
T Consensus 37 ei~~~kr~tvld~~s~r~vn-~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~ 113 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLVN-LGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHP 113 (326)
T ss_pred hhhccceeeeehhhhhHHHh-hccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCc
Confidence 34455666777777776652 2244555667777777777765 45666666667777777777665 567777777777
Q ss_pred CEEecCCCcCc
Q 009771 375 KYLNLSSNLLS 385 (526)
Q Consensus 375 ~~L~L~~n~l~ 385 (526)
+++++-.|.++
T Consensus 114 k~~e~k~~~~~ 124 (326)
T KOG0473|consen 114 KKNEQKKTEFF 124 (326)
T ss_pred chhhhccCcch
Confidence 77777777765
No 442
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=84.30 E-value=0.53 Score=44.62 Aligned_cols=23 Identities=26% Similarity=0.481 Sum_probs=19.9
Q ss_pred cccccccccccceeeeehhcCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRH 463 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~ 463 (526)
+.-...|||+.||+.-||+||..
T Consensus 178 qYG~pVDiWAiGCv~aEl~~G~p 200 (396)
T KOG0593|consen 178 QYGKPVDIWAIGCVFAELLTGEP 200 (396)
T ss_pred cCCCcccchhhhHHHHHHhcCCc
Confidence 44556899999999999999995
No 443
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=83.94 E-value=0.43 Score=26.52 Aligned_cols=14 Identities=36% Similarity=0.582 Sum_probs=5.3
Q ss_pred CCCEEecCCCcCcc
Q 009771 373 HLKYLNLSSNLLSG 386 (526)
Q Consensus 373 ~L~~L~L~~n~l~~ 386 (526)
+|++|++++|++++
T Consensus 3 ~L~~L~l~~n~i~~ 16 (24)
T PF13516_consen 3 NLETLDLSNNQITD 16 (24)
T ss_dssp T-SEEE-TSSBEHH
T ss_pred CCCEEEccCCcCCH
Confidence 34444444444443
No 444
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=83.89 E-value=0.44 Score=49.61 Aligned_cols=73 Identities=23% Similarity=0.377 Sum_probs=43.7
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccc---cccCCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLIN---VLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~---~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
...-|+|||||||.+.||.-+..|--.+. |-.++.. .--|.+..+. .. -...-.+--.|+.-+|+
T Consensus 211 PYDykaDiWSlGITLIEMAqiEPPHheln-------pMRVllKiaKSePPTLlqPS--~W---s~~F~DfLk~cL~Knp~ 278 (1187)
T KOG0579|consen 211 PYDYKADIWSLGITLIEMAQIEPPHHELN-------PMRVLLKIAKSEPPTLLQPS--HW---SRSFSDFLKRCLVKNPR 278 (1187)
T ss_pred CchhhhhHHhhhhHHHHHhccCCCccccc-------hHHHHHHHhhcCCCcccCcc--hh---hhHHHHHHHHHHhcCCc
Confidence 45668999999999999999998832110 0001111 1112333221 12 22233445579999999
Q ss_pred CCCCcccc
Q 009771 518 SRPTMQRI 525 (526)
Q Consensus 518 ~RP~m~~v 525 (526)
.||+.+++
T Consensus 279 ~Rp~aaql 286 (1187)
T KOG0579|consen 279 NRPPAAQL 286 (1187)
T ss_pred cCCCHHHH
Confidence 99998765
No 445
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=82.90 E-value=1.1 Score=25.43 Aligned_cols=13 Identities=38% Similarity=0.460 Sum_probs=5.7
Q ss_pred CCCEEEccCccCC
Q 009771 126 NLTYIYLYENNLT 138 (526)
Q Consensus 126 ~L~~L~Ls~n~~~ 138 (526)
+|++|+|++|.+.
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00369 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 3444444444444
No 446
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=82.90 E-value=1.1 Score=25.43 Aligned_cols=13 Identities=38% Similarity=0.460 Sum_probs=5.7
Q ss_pred CCCEEEccCccCC
Q 009771 126 NLTYIYLYENNLT 138 (526)
Q Consensus 126 ~L~~L~Ls~n~~~ 138 (526)
+|++|+|++|.+.
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00370 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 3444444444444
No 447
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=82.21 E-value=0.87 Score=43.79 Aligned_cols=31 Identities=29% Similarity=0.399 Sum_probs=26.1
Q ss_pred CchhcccccccccccccccceeeeehhcCCC
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILMGRH 463 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llElltg~~ 463 (526)
.|++..+-+.+..+|+|+||.-.+|+..+..
T Consensus 250 a~~sg~~tn~~~a~dIy~fgmcAlemailEi 280 (458)
T KOG1266|consen 250 APESGTTTNTTGASDIYKFGMCALEMAILEI 280 (458)
T ss_pred cCCcCcccccccchhhhhhhHHHHHHHHhee
Confidence 4778888888999999999998999876664
No 448
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=81.45 E-value=0.28 Score=49.93 Aligned_cols=33 Identities=24% Similarity=0.497 Sum_probs=29.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
+.||....-.....||.||.||++.|++.|-.|
T Consensus 355 iAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPP 387 (550)
T KOG0605|consen 355 IAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPP 387 (550)
T ss_pred cchHHHhcCCCCccccHHHHHHHHHHHHhCCCC
Confidence 567877776778899999999999999999999
No 449
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=81.05 E-value=0.43 Score=45.05 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=32.4
Q ss_pred EEcCCCC--CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 425 LTLNHNS--LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 425 l~l~~n~--l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
-.+.+++ +.||...+-......|.|+|||++.||+.|..|.
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF 241 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPF 241 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 3444443 5677777777777899999999999999999993
No 450
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=80.17 E-value=0.62 Score=44.55 Aligned_cols=39 Identities=21% Similarity=0.375 Sum_probs=33.7
Q ss_pred CCCCCchhcccccccccccccccceeeeehhcCCCCCcc
Q 009771 429 HNSLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGEL 467 (526)
Q Consensus 429 ~n~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~ 467 (526)
-|.+.||...+...-...|.|.+||+..||..||.|.+.
T Consensus 415 pnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 415 PNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred CcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 356788888887888889999999999999999999763
No 451
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=79.66 E-value=0.58 Score=49.36 Aligned_cols=35 Identities=31% Similarity=0.377 Sum_probs=29.2
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
+.|+..+ ....+..+|.|||||.+.|.+||..|..
T Consensus 190 LhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 190 LHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred cChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 4467666 3678888999999999999999999943
No 452
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.01 E-value=0.46 Score=42.35 Aligned_cols=84 Identities=23% Similarity=0.180 Sum_probs=62.3
Q ss_pred CCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccc-hHHh-hcCcCCCEEEccCC-cCcccccccccCCCCC
Q 009771 346 NFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQI-PFAI-GKLFNLASLDLSKN-KLSGSIPTEIGNCSEL 422 (526)
Q Consensus 346 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~-~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L 422 (526)
.-..++.++-++..+..+.-+.+..+++++.|.+.+|.--+.. -..+ +-.++|+.|++++| +++...-..+..+++|
T Consensus 99 ~~~~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknL 178 (221)
T KOG3864|consen 99 DNVKIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNL 178 (221)
T ss_pred CcceEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhh
Confidence 3446788999999988887778888999999999988643321 1111 23578999999977 5776666777888888
Q ss_pred CeEEcCC
Q 009771 423 RNLTLNH 429 (526)
Q Consensus 423 ~~l~l~~ 429 (526)
+.|.+.+
T Consensus 179 r~L~l~~ 185 (221)
T KOG3864|consen 179 RRLHLYD 185 (221)
T ss_pred HHHHhcC
Confidence 8887765
No 453
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=78.62 E-value=0.86 Score=45.50 Aligned_cols=80 Identities=24% Similarity=0.418 Sum_probs=48.2
Q ss_pred ccccccccccceeeeehhcCCCCCcccc-------ccccccCCC-ccccccc-cCCCCCCc--ccchHHHHHHHHHHHHh
Q 009771 442 VTEKCDVYSFGVVALEILMGRHPGELLS-------SLSSSSGPK-IMLINVL-DQRLSPPV--NQKIVQDIILVSTIAFA 510 (526)
Q Consensus 442 ~~~k~dvysfGv~llElltg~~P~~~~~-------~~~~~~~~~-~~~~~~~-d~~l~~~~--~~~~~~~~~~~~~la~~ 510 (526)
.....|+||||.|+.|+..+-.-+.... .++.. .|. ..+.++| .+++.|.. .....+++..+.++.--
T Consensus 403 syk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~-DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMke 481 (513)
T KOG2052|consen 403 SYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS-DPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKE 481 (513)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC-CCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHH
Confidence 3445899999999999875443322111 11111 111 1122332 34444322 13456789999999999
Q ss_pred cCCCCCCCCCCc
Q 009771 511 CLSSQPKSRPTM 522 (526)
Q Consensus 511 C~~~~p~~RP~m 522 (526)
|...+|..|-|.
T Consensus 482 CW~~Np~aRltA 493 (513)
T KOG2052|consen 482 CWYANPAARLTA 493 (513)
T ss_pred hhcCCchhhhHH
Confidence 999999999753
No 454
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=77.16 E-value=0.87 Score=47.56 Aligned_cols=36 Identities=31% Similarity=0.536 Sum_probs=31.8
Q ss_pred CCCCCchhcccccccccccccccceeeeehhcCCCC
Q 009771 429 HNSLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 429 ~n~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
.|.+.||....-..+..||.||-||+|.||+.|+.|
T Consensus 835 ~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~p 870 (1034)
T KOG0608|consen 835 PNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPP 870 (1034)
T ss_pred CcccChHHhcccCccccchhhHhhHHHHHHhhCCCC
Confidence 566778877767788999999999999999999998
No 455
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=75.02 E-value=0.78 Score=47.25 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=30.0
Q ss_pred CchhcccccccccccccccceeeeehhcCCCCC
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
.||..........+|.||.||++.|+.+|+.|.
T Consensus 168 APElv~e~pyd~~sDlWslGcilYE~~~G~PPF 200 (808)
T KOG0597|consen 168 APELVEEQPYDHTSDLWSLGCILYELYVGQPPF 200 (808)
T ss_pred CHHHHcCCCccchhhHHHHHHHHHHHhcCCCCc
Confidence 588888888899999999999999999999993
No 456
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=74.85 E-value=1.2 Score=45.27 Aligned_cols=31 Identities=19% Similarity=0.370 Sum_probs=24.7
Q ss_pred chhc-ccccccccccccccceeeeehhcCCCC
Q 009771 434 GKLA-HTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 434 ~~~~-~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
||.. ..-..+...|+||-||++.||++||..
T Consensus 288 PELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI 319 (560)
T KOG0600|consen 288 PELLLGATSYGTAVDLWSVGCILAELFLGKPI 319 (560)
T ss_pred hHHhcCCcccccceeehhhhHHHHHHHcCCCC
Confidence 4433 334677889999999999999999965
No 457
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=74.57 E-value=0.71 Score=47.03 Aligned_cols=28 Identities=25% Similarity=0.513 Sum_probs=25.2
Q ss_pred Cchhcccccccccccccccceeeeehhc
Q 009771 433 NGKLAHTMVVTEKCDVYSFGVVALEILM 460 (526)
Q Consensus 433 ~~~~~~~~~~~~k~dvysfGv~llEllt 460 (526)
+||-..+...++|.|+|++|+++.|+++
T Consensus 430 sPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 430 SPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred CHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 4777777889999999999999999996
No 458
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=73.12 E-value=1.5 Score=42.68 Aligned_cols=92 Identities=18% Similarity=0.176 Sum_probs=49.9
Q ss_pred chhc-ccccccccccccccceeeeehhcCCC--CCcc----ccccccccC-CCcc-c-------cccccCCCCCCccc--
Q 009771 434 GKLA-HTMVVTEKCDVYSFGVVALEILMGRH--PGEL----LSSLSSSSG-PKIM-L-------INVLDQRLSPPVNQ-- 495 (526)
Q Consensus 434 ~~~~-~~~~~~~k~dvysfGv~llElltg~~--P~~~----~~~~~~~~~-~~~~-~-------~~~~d~~l~~~~~~-- 495 (526)
||.. +....+.+.||||-|||+-||+-|+. ||+. ++...+.-. |... + .+.-.+.+.+....
T Consensus 194 PELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~ 273 (364)
T KOG0658|consen 194 PELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKV 273 (364)
T ss_pred HHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceee
Confidence 5543 34467889999999999999999884 3332 111111000 1000 0 01111222211100
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCcccc
Q 009771 496 KIVQDIILVSTIAFACLSSQPKSRPTMQRI 525 (526)
Q Consensus 496 ~~~~~~~~~~~la~~C~~~~p~~RP~m~~v 525 (526)
.....-.+.+++...+...+|.+|.+..|+
T Consensus 274 ~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~ 303 (364)
T KOG0658|consen 274 FFKRLPPDALDLLSKLLQYSPSKRLSALEA 303 (364)
T ss_pred cccCCCHHHHHHHHHHhccChhhcCCHHHH
Confidence 001122356788889999999999987765
No 459
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=71.55 E-value=1.6 Score=43.61 Aligned_cols=28 Identities=36% Similarity=0.571 Sum_probs=25.0
Q ss_pred cccccccccccccceeeeehhcCCCCCc
Q 009771 439 TMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 439 ~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..+++.|.||||.||+....+-||+|..
T Consensus 658 PPKIsnKVDVWSvGVIFyQClYGrKPFG 685 (775)
T KOG1151|consen 658 PPKISNKVDVWSVGVIFYQCLYGRKPFG 685 (775)
T ss_pred CCccccceeeEeeehhhhhhhccCCCCC
Confidence 3478999999999999999999999943
No 460
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=70.41 E-value=2.2 Score=39.40 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=30.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
++||......++..+|+|+-||++.-++.|..|.
T Consensus 179 maPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF 212 (355)
T KOG0033|consen 179 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 212 (355)
T ss_pred cCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCC
Confidence 5688888778888999999999999999999994
No 461
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=70.11 E-value=1.9 Score=44.02 Aligned_cols=23 Identities=26% Similarity=0.579 Sum_probs=20.5
Q ss_pred ccccccccceeeeehhcCCCCCc
Q 009771 444 EKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 444 ~k~dvysfGv~llElltg~~P~~ 466 (526)
...||||+||++.-++.|+.|.+
T Consensus 198 PAVDiWSLGVILyMLVCGq~PFq 220 (864)
T KOG4717|consen 198 PAVDIWSLGVILYMLVCGQPPFQ 220 (864)
T ss_pred cchhhhHHHHHHHHHHhCCCccc
Confidence 46899999999999999999954
No 462
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=68.35 E-value=3.1 Score=43.28 Aligned_cols=78 Identities=19% Similarity=0.272 Sum_probs=46.7
Q ss_pred ccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCC
Q 009771 438 HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPK 517 (526)
Q Consensus 438 ~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~ 517 (526)
..++..-|.||||+||.-.|+.-+|.|..+.--.+ ..+ .+..--.|.+.. . +.-.......-.|++--|.
T Consensus 198 DEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-ALY---HIAQNesPtLqs---~---eWS~~F~~Fvd~CLqKipq 267 (948)
T KOG0577|consen 198 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALY---HIAQNESPTLQS---N---EWSDYFRNFVDSCLQKIPQ 267 (948)
T ss_pred cccccCCccceeeccchhhhhhhcCCCccCchHHH-HHH---HHHhcCCCCCCC---c---hhHHHHHHHHHHHHhhCcc
Confidence 34577889999999999999999998843211000 000 011111222321 1 2222334566789999999
Q ss_pred CCCCcccc
Q 009771 518 SRPTMQRI 525 (526)
Q Consensus 518 ~RP~m~~v 525 (526)
+|||-.+.
T Consensus 268 eRptse~l 275 (948)
T KOG0577|consen 268 ERPTSEEL 275 (948)
T ss_pred cCCcHHHH
Confidence 99997653
No 463
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=66.65 E-value=5.1 Score=22.87 Aligned_cols=13 Identities=54% Similarity=0.769 Sum_probs=6.6
Q ss_pred CCCCEEEccCCCC
Q 009771 149 RNLEVLDLGSNNL 161 (526)
Q Consensus 149 ~~L~~L~L~~n~l 161 (526)
.+|+.|+|++|.+
T Consensus 2 ~~L~~L~L~~NkI 14 (26)
T smart00365 2 TNLEELDLSQNKI 14 (26)
T ss_pred CccCEEECCCCcc
Confidence 3455555555544
No 464
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=66.12 E-value=27 Score=35.64 Aligned_cols=36 Identities=31% Similarity=0.307 Sum_probs=19.1
Q ss_pred CCEEecCCCcCcccch---HHhhcCcCCCEEEccCCcCc
Q 009771 374 LKYLNLSSNLLSGQIP---FAIGKLFNLASLDLSKNKLS 409 (526)
Q Consensus 374 L~~L~L~~n~l~~~~~---~~~~~~~~L~~L~l~~n~l~ 409 (526)
+..+.++.|.+..... .....-+.+..|++++|.-.
T Consensus 415 l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~mg 453 (553)
T KOG4242|consen 415 LAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNGMG 453 (553)
T ss_pred ccCcccCCCcccccHHHHHHhhccCcccccccccCCCcc
Confidence 4555666665542221 23334456777777777543
No 465
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=65.81 E-value=6.8 Score=42.80 Aligned_cols=76 Identities=20% Similarity=0.290 Sum_probs=47.8
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 520 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 520 (526)
....++|+||+||...|+--|..|--+.+-. +..+ .-+|-.++........-.+.-.--.-|..-+-++||
T Consensus 204 tyd~R~D~WsLGITaIEladG~PPl~DmHPm-raLF--------~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP 274 (953)
T KOG0587|consen 204 TYDYRSDLWSLGITAIEMAEGAPPLCDMHPM-RALF--------LIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRP 274 (953)
T ss_pred CcccccchhhccceeehhcCCCCCccCcchh-hhhc--------cCCCCCCccccchhhHHHHHHHHHHHHHhhccccCc
Confidence 3456799999999999999999984332211 0111 112333322222333344555667789999999999
Q ss_pred Ccccc
Q 009771 521 TMQRI 525 (526)
Q Consensus 521 ~m~~v 525 (526)
+|.+.
T Consensus 275 ~~~~l 279 (953)
T KOG0587|consen 275 STEEL 279 (953)
T ss_pred chhhh
Confidence 99774
No 466
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=62.07 E-value=6.5 Score=22.75 Aligned_cols=14 Identities=43% Similarity=0.608 Sum_probs=7.7
Q ss_pred CCCCEEEccCCCCC
Q 009771 149 RNLEVLDLGSNNLN 162 (526)
Q Consensus 149 ~~L~~L~L~~n~l~ 162 (526)
++|++|||++|.+.
T Consensus 2 ~~L~~LdL~~N~i~ 15 (28)
T smart00368 2 PSLRELDLSNNKLG 15 (28)
T ss_pred CccCEEECCCCCCC
Confidence 34555666655553
No 467
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=60.44 E-value=7.4 Score=37.18 Aligned_cols=85 Identities=18% Similarity=0.245 Sum_probs=48.1
Q ss_pred chhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccc---hHHHHHHHHHHHHh
Q 009771 434 GKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQK---IVQDIILVSTIAFA 510 (526)
Q Consensus 434 ~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~---~~~~~~~~~~la~~ 510 (526)
||.....+....+|.||.||+..-++.|-.|...-.+. ...|.. ..++....++. .-.|+.+..+=-+.
T Consensus 232 Pevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~--aispgM------k~rI~~gqy~FP~pEWs~VSe~aKdlIR 303 (400)
T KOG0604|consen 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AISPGM------KRRIRTGQYEFPEPEWSCVSEAAKDLIR 303 (400)
T ss_pred HHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc--cCChhH------HhHhhccCccCCChhHhHHHHHHHHHHH
Confidence 45555666777799999999999999999994432221 111111 11221110111 11234443333333
Q ss_pred c-CCCCCCCCCCccccC
Q 009771 511 C-LSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C-~~~~p~~RP~m~~v~ 526 (526)
| +..+|++|.|+.||+
T Consensus 304 ~LLkt~PteRlTI~~~m 320 (400)
T KOG0604|consen 304 KLLKTEPTERLTIEEVM 320 (400)
T ss_pred HHhcCCchhheeHHHhh
Confidence 3 467899999998874
No 468
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=59.85 E-value=3.8 Score=39.66 Aligned_cols=22 Identities=23% Similarity=0.499 Sum_probs=20.0
Q ss_pred cccccccccccceeeeehhcCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGR 462 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~ 462 (526)
..+...|+||+||+..||++++
T Consensus 197 ~Ys~~vDiWs~GcIfaEm~~~~ 218 (323)
T KOG0594|consen 197 SYSTSVDIWSLGCIFAEMFTRR 218 (323)
T ss_pred cCCCCcchHhHHHHHHHHHhCC
Confidence 5788899999999999999976
No 469
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=58.34 E-value=2.9 Score=42.02 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=30.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.....+.+...|.||+||++.||+.|+.|.
T Consensus 353 MAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPF 386 (591)
T KOG0986|consen 353 MAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPF 386 (591)
T ss_pred cCHHHHcCCcccCCccHHHHHhHHHHHHcccCch
Confidence 4588888888888999999999999999999994
No 470
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=54.86 E-value=8.5 Score=21.95 Aligned_cols=13 Identities=31% Similarity=0.399 Sum_probs=6.6
Q ss_pred CCCEEEccCccCC
Q 009771 126 NLTYIYLYENNLT 138 (526)
Q Consensus 126 ~L~~L~Ls~n~~~ 138 (526)
+|++|++++|+++
T Consensus 3 ~L~~L~vs~N~Lt 15 (26)
T smart00364 3 SLKELNVSNNQLT 15 (26)
T ss_pred ccceeecCCCccc
Confidence 3455555555544
No 471
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=51.92 E-value=5 Score=38.60 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=27.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
+.||.......-...|.|..|||..||+.||-|
T Consensus 335 LAPEVleDnDYgraVDWWG~GVVMYEMmCGRLP 367 (516)
T KOG0690|consen 335 LAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLP 367 (516)
T ss_pred cCchhhccccccceeehhhhhHHHHHHHhccCc
Confidence 346666666667789999999999999999999
No 472
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=51.85 E-value=3.9 Score=39.78 Aligned_cols=23 Identities=30% Similarity=0.557 Sum_probs=20.7
Q ss_pred cccccccccccceeeeehhcCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRH 463 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~ 463 (526)
..+...|+||-||++-|+++||.
T Consensus 204 ~Yt~aiDiWSvGCI~AEmL~gkp 226 (359)
T KOG0660|consen 204 EYTKAIDIWSVGCILAEMLTGKP 226 (359)
T ss_pred cccchhhhhhhhHHHHHHHcCCC
Confidence 56778999999999999999984
No 473
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=50.88 E-value=6.7 Score=39.85 Aligned_cols=75 Identities=21% Similarity=0.290 Sum_probs=42.5
Q ss_pred ccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCCC
Q 009771 442 VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRPT 521 (526)
Q Consensus 442 ~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~ 521 (526)
...+.|||+.||.+.-++-|+-|...-..+ . ....++...+.-+......++...+ -..|+ .-+|+.|.+
T Consensus 296 ~g~a~DiWalGVTLYCllfG~~PF~~~~~~--~-----l~~KIvn~pL~fP~~pe~~e~~kDl-i~~lL--~KdP~~Ri~ 365 (576)
T KOG0585|consen 296 SGFALDIWALGVTLYCLLFGQLPFFDDFEL--E-----LFDKIVNDPLEFPENPEINEDLKDL-IKRLL--EKDPEQRIT 365 (576)
T ss_pred cchhhhhhhhhhhHHHhhhccCCcccchHH--H-----HHHHHhcCcccCCCcccccHHHHHH-HHHHh--hcChhheee
Confidence 466789999999999999999994321100 0 1222333333222112122233322 23454 468999999
Q ss_pred ccccC
Q 009771 522 MQRIS 526 (526)
Q Consensus 522 m~~v~ 526 (526)
..||.
T Consensus 366 l~~ik 370 (576)
T KOG0585|consen 366 LPDIK 370 (576)
T ss_pred hhhhe
Confidence 88763
No 474
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=50.52 E-value=8.1 Score=36.36 Aligned_cols=26 Identities=31% Similarity=0.668 Sum_probs=22.6
Q ss_pred cccccccccccceeeeehhcCCCCCc
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
++..-.|+|-|||++.-.+||+.|.+
T Consensus 201 ~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 201 VVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred EecccccchheeeeeeeeecCCCcch
Confidence 45566899999999999999999954
No 475
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=49.71 E-value=4.3 Score=41.55 Aligned_cols=32 Identities=19% Similarity=0.432 Sum_probs=24.4
Q ss_pred chhcccccccc-----cccccccceeeeehhcCCCCC
Q 009771 434 GKLAHTMVVTE-----KCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 434 ~~~~~~~~~~~-----k~dvysfGv~llElltg~~P~ 465 (526)
|||.....+.. ..|.|++||+..|++||+.|.
T Consensus 583 pEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPF 619 (732)
T KOG0614|consen 583 PEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPF 619 (732)
T ss_pred cccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCC
Confidence 56554444433 469999999999999999994
No 476
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=48.46 E-value=18 Score=38.86 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=24.7
Q ss_pred CCCchhcccccc-cccccccccceeeeehhcCCCCC
Q 009771 431 SLNGKLAHTMVV-TEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 431 ~l~~~~~~~~~~-~~k~dvysfGv~llElltg~~P~ 465 (526)
.+.||....... ..-.||||-||+...|++|+.|.
T Consensus 490 Y~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~W 525 (601)
T KOG0590|consen 490 YLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPW 525 (601)
T ss_pred CcCcccccccccCcchhhhhhccceEEEEecCCCcc
Confidence 344554433222 33479999999999999999984
No 477
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=46.23 E-value=24 Score=37.83 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=29.9
Q ss_pred CCCCCchhcccccccccccccccceeeeehhcCCCC
Q 009771 429 HNSLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 429 ~n~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
.+-..||+......+.++|+||+||+..-+..|.++
T Consensus 173 ~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~ 208 (700)
T KOG2137|consen 173 LNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKS 208 (700)
T ss_pred cccccchhhccccccccccceeeeeEEEEEecCCcc
Confidence 344568988888899999999999999988866666
No 478
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=43.50 E-value=5.8 Score=40.38 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=25.3
Q ss_pred chhcccccccccccccccceeeeehhcCCC
Q 009771 434 GKLAHTMVVTEKCDVYSFGVVALEILMGRH 463 (526)
Q Consensus 434 ~~~~~~~~~~~k~dvysfGv~llElltg~~ 463 (526)
||..-+....+..|+|||.|+..|++||.-
T Consensus 420 pEVllGsgY~~~ADiWS~AC~~FELaTGDy 449 (590)
T KOG1290|consen 420 PEVLLGSGYSTSADIWSTACMAFELATGDY 449 (590)
T ss_pred cceeecCCCCCchhHHHHHHHHHHhhcCce
Confidence 555556677888999999999999999973
No 479
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=38.92 E-value=9.4 Score=43.10 Aligned_cols=33 Identities=27% Similarity=0.567 Sum_probs=26.3
Q ss_pred CCchhccc-----ccccccccccccceeeeehhcCCCC
Q 009771 432 LNGKLAHT-----MVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 432 l~~~~~~~-----~~~~~k~dvysfGv~llElltg~~P 464 (526)
++||.... +..-..||.||.||.+.||+-|..|
T Consensus 243 ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TP 280 (1317)
T KOG0612|consen 243 ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETP 280 (1317)
T ss_pred cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCc
Confidence 55665422 4556779999999999999999999
No 480
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=37.84 E-value=15 Score=36.62 Aligned_cols=26 Identities=35% Similarity=0.474 Sum_probs=23.5
Q ss_pred cccccccccccccceeeeehhcCCCC
Q 009771 439 TMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 439 ~~~~~~k~dvysfGv~llElltg~~P 464 (526)
....+++.||||-||++|-+++++.|
T Consensus 252 ~~~QttaiDiws~GVI~Lslls~~~P 277 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVILLSLLSRRYP 277 (418)
T ss_pred ccCcCCccceeeccceeehhhccccc
Confidence 34568889999999999999999999
No 481
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=36.18 E-value=25 Score=36.61 Aligned_cols=91 Identities=24% Similarity=0.249 Sum_probs=53.0
Q ss_pred cCCCCCCeecCcCCcCccc--CcccccCCCCCCEEecCCCcCcccchHHhhcC--cCCCEEEccCCcCcccccc------
Q 009771 345 GNFSALSYLDLSDNRICGI--IPDELTKLSHLKYLNLSSNLLSGQIPFAIGKL--FNLASLDLSKNKLSGSIPT------ 414 (526)
Q Consensus 345 ~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~--~~L~~L~l~~n~l~~~~~~------ 414 (526)
.+.+.+..+.|++|++... +...-...++|+.|+|++|+..-....++... ..|++|-+.+|.+......
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~tf~~~s~yv~ 294 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCTTFSDRSEYVS 294 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccccchhhhHHHHH
Confidence 3456778888999987532 11112346789999999993221122233332 3578888999988664321
Q ss_pred -cccCCCCCCeEEcCCCCCCchhc
Q 009771 415 -EIGNCSELRNLTLNHNSLNGKLA 437 (526)
Q Consensus 415 -~~~~l~~L~~l~l~~n~l~~~~~ 437 (526)
.-..+|+|..| +|..+.|+..
T Consensus 295 ~i~~~FPKL~~L--DG~ev~~~~~ 316 (585)
T KOG3763|consen 295 AIRELFPKLLRL--DGVEVQPEVI 316 (585)
T ss_pred HHHHhcchheee--cCcccCcccc
Confidence 11135555444 5666666553
No 482
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=35.94 E-value=19 Score=37.41 Aligned_cols=63 Identities=25% Similarity=0.322 Sum_probs=33.1
Q ss_pred CCCCCCEEEccCccCCcc--CCcccCCCCCCCEEEccCC--CCCCCCccccCC--CCCCCEEEccCCcCCc
Q 009771 123 SLSNLTYIYLYENNLTGT--IPKEIGSLRNLEVLDLGSN--NLNGTIPIEIGS--VRNLETLSLDGNKLSG 187 (526)
Q Consensus 123 ~l~~L~~L~Ls~n~~~~~--ip~~l~~l~~L~~L~L~~n--~l~~~~p~~l~~--l~~L~~L~L~~n~l~~ 187 (526)
+.+.+..++|++|++... +..--...|+|..|+|++| .+.. -.++.+ ...|++|-+.+|.+..
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~--~~el~K~k~l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISS--ESELDKLKGLPLEELVLEGNPLCT 284 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcc--hhhhhhhcCCCHHHeeecCCcccc
Confidence 345556666666665421 1111123467777777777 3221 122222 2346777777777653
No 483
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=34.34 E-value=27 Score=19.59 Aligned_cols=11 Identities=45% Similarity=0.519 Sum_probs=5.3
Q ss_pred CCCCEEEccCC
Q 009771 149 RNLEVLDLGSN 159 (526)
Q Consensus 149 ~~L~~L~L~~n 159 (526)
++|++|+|++|
T Consensus 2 ~~L~~L~l~~C 12 (26)
T smart00367 2 PNLRELDLSGC 12 (26)
T ss_pred CCCCEeCCCCC
Confidence 34455555444
No 484
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=32.21 E-value=35 Score=35.42 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=29.5
Q ss_pred EcCCCCCCc----------hhcccccccccccccccceeeeehhcCCC
Q 009771 426 TLNHNSLNG----------KLAHTMVVTEKCDVYSFGVVALEILMGRH 463 (526)
Q Consensus 426 ~l~~n~l~~----------~~~~~~~~~~k~dvysfGv~llElltg~~ 463 (526)
..+.|.++| |+.-+....-..|.||.||-+.|+-|||.
T Consensus 586 ~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkI 633 (752)
T KOG0670|consen 586 FASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKI 633 (752)
T ss_pred ccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccce
Confidence 456677764 44555566777899999999999999995
No 485
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=31.85 E-value=14 Score=35.66 Aligned_cols=30 Identities=23% Similarity=0.414 Sum_probs=24.3
Q ss_pred chhcccccccccccccccceeeeehhcCCC
Q 009771 434 GKLAHTMVVTEKCDVYSFGVVALEILMGRH 463 (526)
Q Consensus 434 ~~~~~~~~~~~k~dvysfGv~llElltg~~ 463 (526)
||..-+....++.|+||.||++-||++|+.
T Consensus 186 pevil~~~~ke~vdiwSvGci~gEli~~~V 215 (369)
T KOG0665|consen 186 PEVILGMGYKENVDIWSVGCIMGELILGTV 215 (369)
T ss_pred chheeccCCcccchhhhhhhHHHHHhhceE
Confidence 444444457889999999999999999984
No 486
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=26.32 E-value=18 Score=35.27 Aligned_cols=26 Identities=19% Similarity=0.347 Sum_probs=21.9
Q ss_pred ccccccccccccccceeeeehhcCCC
Q 009771 438 HTMVVTEKCDVYSFGVVALEILMGRH 463 (526)
Q Consensus 438 ~~~~~~~k~dvysfGv~llElltg~~ 463 (526)
.....++..|.||+||++-|+++++.
T Consensus 251 G~~tyst~iDMWSvGCI~aE~l~~kP 276 (419)
T KOG0663|consen 251 GAKTYSTAVDMWSVGCIFAELLTQKP 276 (419)
T ss_pred CCcccCcchhhhhHHHHHHHHHhcCC
Confidence 34457888999999999999999874
No 487
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=25.43 E-value=15 Score=33.66 Aligned_cols=21 Identities=19% Similarity=0.526 Sum_probs=19.2
Q ss_pred ccccccccceeeeehhcCCCC
Q 009771 444 EKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 444 ~k~dvysfGv~llElltg~~P 464 (526)
-..|.|||||++-+|+..|.|
T Consensus 212 YSLD~WS~GcmlA~miFrkep 232 (338)
T KOG0668|consen 212 YSLDMWSLGCMLASMIFRKEP 232 (338)
T ss_pred ccHHHHHHHHHHHHHHhccCc
Confidence 347999999999999999999
No 488
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=25.27 E-value=83 Score=29.53 Aligned_cols=26 Identities=12% Similarity=0.127 Sum_probs=21.4
Q ss_pred cccccccccccccceeeeehhcCCCC
Q 009771 439 TMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 439 ~~~~~~k~dvysfGv~llElltg~~P 464 (526)
......+.|+|.-||++-||.||.+-
T Consensus 203 ~r~yg~~iDiWgAgCimaeMwtrspi 228 (376)
T KOG0669|consen 203 DREYGPPIDIWGAGCIMAEMWTRSPI 228 (376)
T ss_pred ccccCCcchhHhHHHHHHHHHccCcc
Confidence 34567788999999999999998753
No 489
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=25.06 E-value=18 Score=36.85 Aligned_cols=81 Identities=16% Similarity=0.273 Sum_probs=43.0
Q ss_pred ccccccccccceeeeehhcCCCCCc--cccccccccC-------CCc-cc-cccccCCCCCCccc--chHHHHHHHHHHH
Q 009771 442 VTEKCDVYSFGVVALEILMGRHPGE--LLSSLSSSSG-------PKI-ML-INVLDQRLSPPVNQ--KIVQDIILVSTIA 508 (526)
Q Consensus 442 ~~~k~dvysfGv~llElltg~~P~~--~~~~~~~~~~-------~~~-~~-~~~~d~~l~~~~~~--~~~~~~~~~~~la 508 (526)
...+.||||.|-|+.|++++-.-.+ ....+. ..+ |.. .+ .-|+-.+.++...+ .-...|..+-+.-
T Consensus 401 Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yq-lpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~ 479 (534)
T KOG3653|consen 401 AFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQ-LPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETI 479 (534)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCccc-CchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHH
Confidence 3446899999999999998664321 111110 001 100 01 11233332221111 1113455666777
Q ss_pred HhcCCCCCCCCCCcc
Q 009771 509 FACLSSQPKSRPTMQ 523 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~ 523 (526)
=.|..++|+.|-|..
T Consensus 480 EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 480 EECWDHDAEARLTAG 494 (534)
T ss_pred HHHcCCchhhhhhhH
Confidence 789999999998753
No 490
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=23.57 E-value=22 Score=34.36 Aligned_cols=26 Identities=31% Similarity=0.612 Sum_probs=22.8
Q ss_pred cccccccccccceeeeehhcCCCCCc
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
....+||.||+||++.-|+.|-.|..
T Consensus 267 ~YDKrCDlwSLGvIlYImLsGYpPFv 292 (463)
T KOG0607|consen 267 FYDKRCDLWSLGVILYIMLSGYPPFV 292 (463)
T ss_pred cccccccHHHHHHHHHHHHhCCCCcc
Confidence 45678999999999999999999943
No 491
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=23.21 E-value=18 Score=34.11 Aligned_cols=25 Identities=24% Similarity=0.412 Sum_probs=21.8
Q ss_pred cccccccccccceeeeehhcCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..+...|.|+.||++..++.|..|.
T Consensus 204 GYs~EVD~Wa~GVImyTLLaGcpPF 228 (411)
T KOG0599|consen 204 GYSKEVDEWACGVIMYTLLAGCPPF 228 (411)
T ss_pred CccchhhHHHHHHHHHHHHcCCCch
Confidence 4566789999999999999999994
Done!